BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016197
(393 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/384 (68%), Positives = 319/384 (83%), Gaps = 4/384 (1%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
RS +++ L+ KLG LG C+R SS ++RFAALWGNGD+GRLGLGSLES+WRP
Sbjct: 3 RSCMRVSQSALQS--KLG--LGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPA 58
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
VCSAF+ HSL A+ACGGAHTLFLTE+GCVYA GLNDFGQLG+S + Y+ EPL +S L K
Sbjct: 59 VCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK 118
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+++ I+ GY+HS+AIT DGELYMWGKNSNGQLGLGKKAA + +P+KVECL+GI K A
Sbjct: 119 KIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVA 178
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG E SVA T G+ LSWGAGGSGRLGHG ESS+LGF R++SEY PRLI+ LEG+KVK
Sbjct: 179 LGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNV 238
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
AAG LHSACIDENG V+IFG+RA+DK F+E +A PS+IS+LPYS++V CGGYHTCV+
Sbjct: 239 AAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVI 298
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
+S GEL+TWGSNENGCLG+G ++ +H PER++GPFS++PV QVSCGWKHTAAISEG + T
Sbjct: 299 SSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISEGNVFT 358
Query: 364 WGWGGSHGTFSEDGHSSGGQLDRG 387
WGWGGS+GTFS+DGHSSGGQL +G
Sbjct: 359 WGWGGSYGTFSDDGHSSGGQLGQG 382
>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 275/380 (72%), Positives = 314/380 (82%), Gaps = 6/380 (1%)
Query: 15 KQDIKLGSKLGIC-KRWISSTL---QRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAF 68
K + +G LG C KRW+SS+ ++R AA+WGNGDYGRLG G+L+S WRP + S+F
Sbjct: 3 KNSVLIGGGLGYCYKRWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSF 62
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+LK+++CGGAHTLFLTETG VYATGLNDFGQLG+S N Y +EPL +SGLKKE+VQI
Sbjct: 63 HNSNLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQI 122
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S GYHHS AITVDGELY WGKNSNGQLGLGKKA V+P+PTKVECLSGI K AL E
Sbjct: 123 SAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEH 182
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+AVT GG+ LSWG GGSGRLGHG +SS+LGF RS+SEYTPR IK+LEGVKVK AAG L
Sbjct: 183 SIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLL 242
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
HSACIDENG VYIFG++AVDK+ F + N+A PS+I KLPYS+EV CGGYHTCV+TSGGE
Sbjct: 243 HSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGE 302
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
LYTWGSNENGCLG GSIDVLH PERV+GPF SPV++VSCGWKHTAAISEG + TWGWGG
Sbjct: 303 LYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAISEGNVFTWGWGG 362
Query: 369 SHGTFSEDGHSSGGQLDRGQ 388
SHGTFSEDG SSGGQL G
Sbjct: 363 SHGTFSEDGLSSGGQLGHGD 382
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTE-----------TG 90
WG+ + G LG GS++ P V F + ++ ++CG HT ++E G
Sbjct: 306 WGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAISEGNVFTWGWGGSHG 365
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GL+ GQLG ++ Y L K + +++S G++H+ AI
Sbjct: 366 TFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAI 413
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/364 (70%), Positives = 300/364 (82%)
Query: 24 LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
LG R S +RFAALWGNGDYGRLGLG+L+S+W+PVVC AF +L A+ACGGAHT
Sbjct: 18 LGFPTRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHT 77
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
LFLTE GCVYATGLNDFGQLG+SE+ YS+EPL + G +K+VVQIS GY+HS AITVDGE
Sbjct: 78 LFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGE 137
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LYMWGKN++GQLGLGK+A ++P+PTKVE L GI K AALG E SVA++ GG SWG
Sbjct: 138 LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGI 197
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G SGRLGHG ESS+LGF +S SEYTPRLIK+LEG+KVK AAG L+SAC DENG V++FG
Sbjct: 198 GVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFG 257
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+R ++K+ +E + A +PSLIS+LP S+EV CGGYHTCVLT+ GELYTWGSNENGCLGIG
Sbjct: 258 ERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIG 317
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
S DV+H PE+VQGPF +S V QVSCGWKHTAAISEG++ TWGWGGS+GTFSE GHSS GQ
Sbjct: 318 SSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQ 377
Query: 384 LDRG 387
L G
Sbjct: 378 LGHG 381
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTE-----------TG 90
WG+ + G LG+GS + P V F K S+ ++CG HT ++E G
Sbjct: 306 WGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNG 365
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
G + GQLG ++ Y + P R+ G + +Q+S G++H+ AI
Sbjct: 366 TFSEVGHSSSGQLGHGSDVDY-INPTRVCFGEDVKALQVSCGFNHTGAI 413
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/359 (68%), Positives = 289/359 (80%), Gaps = 1/359 (0%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
RW +S +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++ LK +ACGGAHTLFLTE
Sbjct: 88 RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 147
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G VYATGLN+FGQLGIS+ +S EP+ + + KE + IS GY+HS +T DGELYMWG
Sbjct: 148 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 206
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
NSNGQLGLGKK+AK + +PTKV+ L GI K+AALG + S+AV GG+V SWG G SGR
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 266
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK AAG LHSAC+DENG VYIFG+RA +
Sbjct: 267 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 326
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
++ F E N A PSLIS L EEV CGGYHTCVLT GG+LY+WGSNENGCLG GS V
Sbjct: 327 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 386
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
H PERV+GPFS+SPV +VSCGWKHTAAIS G I TWGWGGSHGTFS DGHSSGGQL G
Sbjct: 387 HLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSGGQLGHG 445
>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC4-like [Glycine max]
Length = 404
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/351 (67%), Positives = 294/351 (83%), Gaps = 1/351 (0%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+RF ALWGNGD+GRLGLG+L+S+W+PVVC AF +LKA+ACGGAHTLFLT+ GCVYATG
Sbjct: 19 KRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTDNGCVYATG 78
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LNDFGQLG+SE+ YS+EPL + G +K+VVQ+S GY+HS AITVDGELYMWGKN++ QLG
Sbjct: 79 LNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQLG 138
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LGK+A ++P+PTKVE L+GI K AALG + S+A++ GG+ SWG G SGRLGHG ESS
Sbjct: 139 LGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISDGGEAFSWGVGVSGRLGHGHESS 198
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
ILGF +S SEYTPRLIK+LEG+KVK A+G L+SAC DENG V++FG+RA++++ + +
Sbjct: 199 ILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRLKAMS 258
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
A +PSLI +LP S +VVCGGYHTCVLT+ GELYTW SNENGCLGIGS DV+H PE++ G
Sbjct: 259 DATKPSLIGELP-SSKVVCGGYHTCVLTNSGELYTWXSNENGCLGIGSSDVIHLPEKIXG 317
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
PF +S V Q+SCGWK+TAAISEG++ TWGWGGS+GTFSE GHSS GQL G
Sbjct: 318 PFLKSSVSQLSCGWKNTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHG 368
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+ +G V WG G GRLG G S++ P + +K A G
Sbjct: 13 SLRASGKRFVALWGNGDFGRLGLGNLD---------SQWKPVVCPAFRDRTLKAIACGGA 63
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSEEVVCGGY-HTCVLTSG 306
H+ + +NG VY G ++ E H + P + V GY H+C +T
Sbjct: 64 HTLFLTDNGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVD 123
Query: 307 GELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
GELY WG N + LG+G + +++ P +V+ + + + G H+ AIS+ G+ +
Sbjct: 124 GELYMWGKNTSVQLGLGKRAPNIVPLPTKVE-YLNGINIKMAALGSDHSLAISDGGEAFS 182
Query: 364 WGWGGS 369
WG G S
Sbjct: 183 WGVGVS 188
>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 434
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/374 (67%), Positives = 301/374 (80%)
Query: 14 LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
L +D KLG C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS+
Sbjct: 25 LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY+
Sbjct: 85 TAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYY 144
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAVT
Sbjct: 145 HSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVT 204
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV AAG LHSAC
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACT 264
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
DENG ++FG+++++KM F +A PS+IS++PY+EEV CGGYHTCV+T GGELYTWG
Sbjct: 265 DENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWG 324
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
SNENGCLG S V HSP RV+GPF ES V QVSCGWKHTAAIS+ + TWGWGGSHGTF
Sbjct: 325 SNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTF 384
Query: 374 SEDGHSSGGQLDRG 387
S DGHSSGGQL G
Sbjct: 385 SVDGHSSGGQLGHG 398
>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/372 (67%), Positives = 302/372 (81%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA 75
+D KLG C+RW+S+ +RFAA+WG+GDYGRLGLG+L+S+W P CSA HS++A
Sbjct: 27 KDSKLGPIGVSCRRWLSNESGKRFAAMWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRA 86
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY+HS
Sbjct: 87 VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHS 146
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAVT G
Sbjct: 147 AAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDG 206
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KVK AAG LHSAC DE
Sbjct: 207 GEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDE 266
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
NG ++FG+R+++KM F +A PS+IS++PY+E V CGGYHTCV+T GGELYTWGSN
Sbjct: 267 NGSAFMFGERSINKMGFGGVRNATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSN 326
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
ENGCLG S V HSP RV+GPF ES V QVSCGWKHTAAIS+ K+ TWGWGGSHGTFS
Sbjct: 327 ENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNKVFTWGWGGSHGTFSV 386
Query: 376 DGHSSGGQLDRG 387
DGHSSGGQL G
Sbjct: 387 DGHSSGGQLGHG 398
>gi|13548329|emb|CAC35876.1| putative protein [Arabidopsis thaliana]
Length = 435
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/384 (63%), Positives = 293/384 (76%), Gaps = 19/384 (4%)
Query: 14 LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
L +D KLG C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS+
Sbjct: 25 LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84
Query: 74 KALACGGAHTLFLT----------ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
A+ACGGAHTLFLT ET V+ATGLND GQLG+S+ ++++PL +SGL K
Sbjct: 85 TAVACGGAHTLFLTVSDNKLTHVTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK 144
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+++ IS GY+HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + A
Sbjct: 145 DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVA 204
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG E SVAVT GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV
Sbjct: 205 LGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNV 264
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
AAG LHSAC DENG ++FG+++++KM F +A PS+IS++PY+EEV CG
Sbjct: 265 AAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACG------- 317
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
GGELYTWGSNENGCLG S V HSP RV+GPF ES V QVSCGWKHTAAIS+ + T
Sbjct: 318 --GGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFT 375
Query: 364 WGWGGSHGTFSEDGHSSGGQLDRG 387
WGWGGSHGTFS DGHSSGGQL G
Sbjct: 376 WGWGGSHGTFSVDGHSSGGQLGHG 399
>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
Length = 374
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/321 (66%), Positives = 259/321 (80%), Gaps = 2/321 (0%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLF 85
+RW+SS +R+AA+WGNGD+GRLG GSL+S+WRP ++ S F HSLK++ACGGAHTLF
Sbjct: 11 RRWMSSEAGKRYAAVWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLF 70
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTETGCVYATGLNDFGQLGIS N+ Y+ EP+++SGL+KE++QIS GYHHS AITVDGELY
Sbjct: 71 LTETGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAITVDGELY 130
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
MWG+NSNGQLGLGKKA +++P+PTKVE L+G+ K ALG E S+AVT G+ LSWG GG
Sbjct: 131 MWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEHSIAVTDRGEALSWGLGG 190
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLGH +S F STSEYTPR IK+LE VKVK AAG LHSACID NG V++FG+
Sbjct: 191 FGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVFVFGEV 250
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
+VD+ F E A PS++ KLP + EV CGGYHTCV+TSGGELY WG NENGCLGIGS
Sbjct: 251 SVDRTGFGEAIGAEIPSMVGKLPCANEVSCGGYHTCVVTSGGELYAWGVNENGCLGIGSF 310
Query: 326 DVLHSPERVQGPFSESPVDQV 346
+ LH+PERVQGPF SPV++V
Sbjct: 311 NSLHAPERVQGPFLRSPVEKV 331
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/369 (59%), Positives = 275/369 (74%), Gaps = 11/369 (2%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACIDE G +
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTL 252
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+IFG + + F N RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGC
Sbjct: 253 FIFGQKT--EKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGC 310
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
LG+G D++ SPE ++ + PV +VSCGWKHTA +S I TWGWGG++GTF E+GHS
Sbjct: 311 LGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSGDDIYTWGWGGANGTFFEEGHS 370
Query: 380 SGGQLDRGQ 388
SGGQL G
Sbjct: 371 SGGQLGHGN 379
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLT-----------ETG 90
WG+ + G LGLG + P ++ S+ K + ++CG HT ++ G
Sbjct: 303 WGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSGDDIYTWGWGGANG 362
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
+ G + GQLG ++ Y EP+ + G V +S G++H+ AI
Sbjct: 363 TFFEEGHSSGGQLGHGNDVDY-FEPMMVPFGTNARAVHVSCGFNHTGAI 410
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/356 (60%), Positives = 271/356 (76%), Gaps = 5/356 (1%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCV 92
++R AALWGNGDYGRLGLG LESRW P VC F + +LACGGAHTLFLT++G V
Sbjct: 28 RQRVAALWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRV 87
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ATGLNDFGQLG+ ++ ++LEP+ +SG + VV++S G HHS A+T DG+L++WG+NS
Sbjct: 88 FATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSG 147
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLGK A KV+ PTKV+CL+ K ALG E S+AVT G+VLSWGA GSGRLGHG
Sbjct: 148 GQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHG 207
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
++SSILGF +TSEYTPRLIK +G+K+K AAG LHSACIDE G ++IFG + + F
Sbjct: 208 RQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT--EKGF 265
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
N A RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G D++ SPE
Sbjct: 266 GRSNEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPE 325
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQ 388
++ + PV +VSCGWKHTA IS I TWGWGG++GTF E+GHSSGGQL G
Sbjct: 326 ILKSSLFKLPVSKVSCGWKHTAVISGDDIYTWGWGGANGTFFEEGHSSGGQLGHGN 381
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLT-----------ETG 90
WG+ + G LGLG + P ++ S+ K + ++CG HT ++ G
Sbjct: 305 WGSNENGCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVISGDDIYTWGWGGANG 364
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
+ G + GQLG ++ Y EP+ + G V +S G++H+ AI
Sbjct: 365 TFFEEGHSSGGQLGHGNDVDY-FEPMMVPFGKNARAVHVSCGFNHTGAI 412
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/361 (59%), Positives = 272/361 (75%), Gaps = 10/361 (2%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHTLFLT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L+ W
Sbjct: 90 ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 209
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+K + G+ RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
+ SPE ++ + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQL G
Sbjct: 328 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 387
Query: 388 Q 388
Sbjct: 388 N 388
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLT-----------ETG 90
WG+ + G LGLG + P V+ S+ K + ++CG HT ++ G
Sbjct: 312 WGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANG 371
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
+ G + GQLG ++ Y EP+ + G V +S G++H+ AI
Sbjct: 372 TFFEEGHSSGGQLGHGNDVDY-FEPMMVEFGKNARAVHVSCGFNHTGAI 419
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/361 (59%), Positives = 272/361 (75%), Gaps = 10/361 (2%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHTLFLT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L+ W
Sbjct: 90 ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSWGAAGAG 209
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+K + G+ RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
+ SPE ++ + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQL G
Sbjct: 328 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 387
Query: 388 Q 388
Sbjct: 388 N 388
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLT-----------ETG 90
WG+ + G LGLG + P V+ S+ K + ++CG HT ++ G
Sbjct: 312 WGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANG 371
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
+ G + GQLG ++ Y EP+ + G V +S G++H+ AI
Sbjct: 372 TFFEEGHSSGGQLGHGNDVDY-FEPMMVEFGKNARAVHVSCGFNHTGAI 419
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/317 (66%), Positives = 253/317 (79%), Gaps = 1/317 (0%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
RW +S +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++ LK +ACGGAHTLFLTE
Sbjct: 71 RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 130
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G VYATGLN+FGQLGIS+ +S EP+ + + KE + IS GY+HS +T DGELYMWG
Sbjct: 131 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 189
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
NSNGQLGLGKK+AK + +PTKV+ L GI K+AALG + S+AV GG+V SWG G SGR
Sbjct: 190 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 249
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK AAG LHSAC+DENG VYIFG+RA +
Sbjct: 250 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 309
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
++ F E N A PSLIS L EEV CGGYHTCVLT GG+LY+WGSNENGCLG GS V
Sbjct: 310 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 369
Query: 329 HSPERVQGPFSESPVDQ 345
H PERV+GPFS+SPV +
Sbjct: 370 HLPERVEGPFSKSPVSK 386
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 37/293 (12%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWG 148
G V+ G DFG+LG+ N+ P+ S +E+++ I+ G H+ +T G +Y G
Sbjct: 82 GAVWGNG--DFGRLGLG-NLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATG 138
Query: 149 KNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAG 204
N+ GQLG+ +K P+ ++ K+A + G+ S VT G++ WG
Sbjct: 139 LNNFGQLGISDEKRFSTEPVEVRI-------PKEAMHISAGYNHSCVVTADGELYMWGVN 191
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+G+LG G++S+ + + P + L+G+ +K AA G HS + + G V+ +GD
Sbjct: 192 SNGQLGLGKKSA-------KAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGD 244
Query: 265 RAVDKML---------FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
++ F + P LI +L + V G H+ + G +Y +G
Sbjct: 245 GRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFG 304
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ G + +P + ++V+CG HT +++ G + +WG
Sbjct: 305 ERATNRVSFGEANKATTPSLISTLLD---CEEVACGGYHTCVLTKGGDLYSWG 354
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/355 (59%), Positives = 265/355 (74%), Gaps = 5/355 (1%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVY 93
RR AALWGNGDYGRLGLG+LESRW P C F + +LACGGAHTLFLT++G V+
Sbjct: 33 RRVAALWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGRVF 92
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
ATGLNDFGQLGI + + ++P+ ++G ++VVQIS G HHS A+T DGEL++WGKNS+G
Sbjct: 93 ATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKVVQISAGNHHSCAVTADGELFVWGKNSSG 152
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLGK KV+ P KV+ L+ + + ALG E S+AVT GG+ LSWGA G+GRLGHG
Sbjct: 153 QLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTEGGEALSWGAAGAGRLGHGH 212
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+SSILGF +SEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG + + +F
Sbjct: 213 KSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKT--EKVFG 270
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
N A RP+++ ++ +SEEV CGGYHTC LT GG+LY+WGSNENGCLG+G ++ SPE
Sbjct: 271 RSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRSPEV 330
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQ 388
++ + PV +VSCGWKHTA IS I TWGWGG++GTF E+G SSGGQL G
Sbjct: 331 LRSTLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGQSSGGQLGHGN 385
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLT-----------ETG 90
WG+ + G LGLG P V+ S K + ++CG HT ++ G
Sbjct: 309 WGSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANG 368
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
+ G + GQLG ++ Y EP+ + G V +S G++H+ AI
Sbjct: 369 TFFEEGQSSGGQLGHGNDVDY-FEPMMVELGRNARAVHVSCGFNHTGAI 416
>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/356 (59%), Positives = 264/356 (74%), Gaps = 5/356 (1%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF---EKHSLKALACGGAHTLFLTETGCV 92
+RR AALWGNGD+GRLGLG+LESRW P C F +L+CGGAHTLFLTE G V
Sbjct: 29 RRRVAALWGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRV 88
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ATGLNDFGQLGI ++ ++L+P+ +SG ++VVQIS G HHS A+T DGEL++WGKNS+
Sbjct: 89 FATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSS 148
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLGK A KV+ P KV+ L+ + K ALG E S+ VT G+ LSWGA G GRLGHG
Sbjct: 149 GQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHG 208
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+SS LGF +++EYTPRLIK L+G+K+K AAG LHSACIDE G V+IFG + +K+L
Sbjct: 209 HKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQK-TEKVLG 267
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ N A RPS++ ++ +SEEV CGGYHTC +T G+LY+WGSNENGCLG+G ++ PE
Sbjct: 268 RS-NDAPRPSVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPE 326
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQ 388
V + PV +VSCGWKHTA IS I TWGWGG++GTF E+GHSSGGQL G
Sbjct: 327 VVSSSLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGHSSGGQLGHGN 382
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/304 (59%), Positives = 234/304 (76%), Gaps = 2/304 (0%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
FLTE+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L
Sbjct: 62 FLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA
Sbjct: 122 FAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAA 181
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+GRLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG
Sbjct: 182 GAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQ 241
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ +K + G+ RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G
Sbjct: 242 K-TEKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGG 299
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
D++ SPE ++ + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQL
Sbjct: 300 TDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQL 359
Query: 385 DRGQ 388
G
Sbjct: 360 GHGN 363
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 32/248 (12%)
Query: 43 WGNGDYGRLGLGS----LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG G+LGLG + S R V C A + +K +A G H++ TE G V + G
Sbjct: 124 WGRNSSGQLGLGKRAGKVVSTPRKVDCLADAR--VKMVALGSEHSIATTEEGEVLSWGAA 181
Query: 99 DFGQLGISEN---IGYSL-----EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
G+LG +G+S+ P I L ++ +I+ G HS+ I G L+++G+
Sbjct: 182 GAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQ 241
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ + G G+ ++ PT VE + F+++ A G + VT G + SWG+ +G L
Sbjct: 242 KT--EKGFGRSGDEL--RPTVVEEVP--FSEEVACGGYHTCVVTDSGDLYSWGSNENGCL 295
Query: 210 GHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G + +P ++K L V + G+ H+A I G +Y +G +
Sbjct: 296 GLGGTDMV---------RSPEVLKSSLFKFPVSKVSCGWKHTAVIS-GGDIYTWGWGGAN 345
Query: 269 KMLFQEGN 276
F+EG+
Sbjct: 346 GTFFEEGH 353
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 52 GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIG 110
G G RP V E + +ACGG HT +T++G +Y+ G N+ G LG+ ++
Sbjct: 246 GFGRSGDELRPTVVE--EVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMV 303
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW------------GKNSNGQLGLG 158
S E L+ S K V ++S G+ H++ I+ G++Y W G +S GQLG G
Sbjct: 304 RSPEVLKSSLFKFPVSKVSCGWKHTAVIS-GGDIYTWGWGGANGTFFEEGHSSGGQLGHG 362
Query: 159 KKAAKVIPI 167
P+
Sbjct: 363 NDVDYFEPM 371
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLT-----------ETG 90
WG+ + G LGLG + P V+ S+ K + ++CG HT ++ G
Sbjct: 287 WGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANG 346
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
+ G + GQLG ++ Y EP+ + G V +S G++H+ AI
Sbjct: 347 TFFEEGHSSGGQLGHGNDVDY-FEPMMVEFGKNARAVHVSCGFNHTGAI 394
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/357 (47%), Positives = 231/357 (64%), Gaps = 2/357 (0%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+S +R+ ALWGNGD GRLGL S++ PV+C A E H +++CGGAHTL LT+ G
Sbjct: 21 VSGKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKG 80
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ATGLN GQLG+ S +P+ + G V I+ G +HS+AIT GE Y+WG+N
Sbjct: 81 RVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWGRN 140
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S GQLGLGK+A V P K+E L+G+ K ALG + S+ + G+VLSWG G LG
Sbjct: 141 SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLG 200
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG+ + F + T+EYTPR+I LE ++V+ +AG +HSAC D++G +Y FG ++ ++
Sbjct: 201 HGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQL 260
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
N A +P I LP + CGGYHT +T G++YTWGSNE+GCLG G
Sbjct: 261 GLGNNNDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSG-FRASSK 319
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
P R++ +E+ + ++SCGWKHTAAIS+G I +WGWGGS+GT++ SSGGQL G
Sbjct: 320 PLRLES-LAEAFMSEISCGWKHTAAISDGYIFSWGWGGSYGTYATQAESSGGQLGVG 375
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/387 (45%), Positives = 241/387 (62%), Gaps = 16/387 (4%)
Query: 4 RSLTAMTKYY---LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
RS+ + Y K ++L K G KRW+ ALWGNGD GRLGL S++
Sbjct: 2 RSVIKRRRAYGLTAKNKVELSGKAG--KRWV---------ALWGNGDQGRLGLSESGSQF 50
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
PV+C A E H +++CGGAHTL LT+ G V+ATGLN GQLG+ S +P+ + G
Sbjct: 51 EPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHG 110
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V I+ G +HS+AIT GE Y+WG+NS GQLGLGK+A V P K+E L+G+ K
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLK 170
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
ALG + S+ + G+VLSWG G LGHG+ + F + T+EYTPR+I LE +++
Sbjct: 171 ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQI 230
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
+ +AG +HSAC D++G +Y FG ++ ++ N A +P I LP + CGGYHT
Sbjct: 231 RSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCGGYHT 290
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+T G++YTWGSNE+GCLG G P R++ +E+ + ++SCGWKHTAAIS+G
Sbjct: 291 GAITQDGDIYTWGSNEHGCLGSG-FRASSKPLRLES-LAEAFMSEISCGWKHTAAISDGY 348
Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLDRG 387
I +WGWGGS+GT++ SSGGQL G
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVG 375
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 219/361 (60%), Gaps = 8/361 (2%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
+ R+ ALWGNGDYGRLG S ES W P VC + + ALACGGAHTL LTE G VYA+
Sbjct: 7 KHRWVALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYAS 66
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNG 153
GLND+GQLG+ + G+S+E L + GL E I+ G HS+AI+ DG +YMWG+N+ G
Sbjct: 67 GLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQG 126
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLGK+ + VE L + ALG E S+A++ G+VLSWG +GRLGHG+
Sbjct: 127 QLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGE 186
Query: 214 ---ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
SS+ R +SEYTPRL+K VKV AAG HSAC+DE G ++ FG ++
Sbjct: 187 GHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQL 246
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVL 328
P + +P EE+ CGGYHT ++ G+LY WGSNE GCLG G +
Sbjct: 247 GLGGDRDISEPKRVPVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNAT 306
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
P V+G V QV CGWKHT A++ +G + WGWGGS GT DG SSGGQL G
Sbjct: 307 SLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLG 366
Query: 388 Q 388
Sbjct: 367 N 367
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYA---- 94
+WG+ +YG LG G + V A E + + CG HT+ LT G V+A
Sbjct: 287 MWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGWG 346
Query: 95 --------TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GL+ GQLG+ + LEP ++ + +QIS G++HS AI
Sbjct: 347 GSQGTHGVDGLSSGGQLGLGNENDF-LEPTQVKSKNMKAIQISCGFNHSGAI 397
>gi|413924972|gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/238 (61%), Positives = 180/238 (75%), Gaps = 9/238 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACIDE G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKG 250
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + H P IS EV G +H+C +T+ G+L+ WG N G
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146
Query: 319 CLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
LG+ G+ V+ +P +V ++ V V+ G +H+ A++ EG++L+WG GS
Sbjct: 147 QLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS 199
>gi|413924969|gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 179/238 (75%), Gaps = 9/238 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACID G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDGKG 250
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + H P IS EV G +H+C +T+ G+L+ WG N G
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146
Query: 319 CLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
LG+ G+ V+ +P +V ++ V V+ G +H+ A++ EG++L+WG GS
Sbjct: 147 QLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS 199
>gi|413924970|gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 261
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 178/235 (75%), Gaps = 9/235 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACID
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACID 247
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + H P IS EV G +H+C +T+ G+L+ WG N G
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146
Query: 319 CLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
LG+ G+ V+ +P +V ++ V V+ G +H+ A++ EG++L+WG GS
Sbjct: 147 QLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS 199
>gi|77551420|gb|ABA94217.1| uvb-resistance protein uvr8, possible, putative, expressed [Oryza
sativa Japonica Group]
Length = 362
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/361 (43%), Positives = 201/361 (55%), Gaps = 73/361 (20%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHT---- 85
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
S EP+ +SG ++VV++S G HHS A+T
Sbjct: 86 ----------------------SSSPEPIEVSGFDEKVVEVSAGNHHSCAVT-------- 115
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 116 ------------GAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 163
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 164 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 222
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+K+ F RP+++ +L + + LTSG D+
Sbjct: 223 EKVGFGRSGDELRPTVVEELYQCLSKLRMFAYIKFLTSG------------------TDM 264
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
+ SPE ++ + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQL G
Sbjct: 265 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 324
Query: 388 Q 388
Sbjct: 325 N 325
>gi|357464831|ref|XP_003602697.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
gi|355491745|gb|AES72948.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
Length = 244
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 145/173 (83%)
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S I+ FL+S SEY+PRLIK+LEG+KVK AAG L SAC DENG V+IFGD+ +DK+L +
Sbjct: 36 SIIMYFLKSCSEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKLLLKG 95
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
++ +PSLIS+LPY+EEV CGGYHTCVLT+ GELYTWGSNENGCLGIGS +H PE+V
Sbjct: 96 TSNTTKPSLISELPYAEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYAIHLPEKV 155
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
QGPF ES V QVSCGWKHTAAIS G+I TWGWGGS+GTFS+DGHSSGGQL G
Sbjct: 156 QGPFLESSVVQVSCGWKHTAAISGGRIFTWGWGGSNGTFSDDGHSSGGQLGHG 208
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S + P + E +K +A G + E G V+ G +L + + + +P
Sbjct: 46 SEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKL-LLKGTSNTTKPSL 104
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
IS L +++ G +H+ +T GELY WG N NG LG+G A I +P KV+ G
Sbjct: 105 ISELPY-AEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYA--IHLPEKVQ---GP 158
Query: 178 FTK----QAALGFEQSVAVTGGGKVLSWGAGGS------------GRLGHGQESSILGFL 221
F + Q + G++ + A++ GG++ +WG GGS G+LGHG + +
Sbjct: 159 FLESSVVQVSCGWKHTAAIS-GGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYI--- 214
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
P + E VK + GF H+ I E
Sbjct: 215 ------NPSRVCFAEDVKALQVSCGFNHTGAIFE 242
>gi|294463585|gb|ADE77321.1| unknown [Picea sitchensis]
Length = 243
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 153/214 (71%), Gaps = 4/214 (1%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
ALG E S+A+T GKVLSWG G +GRLGHG +SS+ FL +SE+TP+LIK LEG+KV
Sbjct: 3 ALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCK 62
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
AAG LHS+CIDENG V+ FG + ++ + PS++ LP+ ++V CGGYHTC
Sbjct: 63 IAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFVQQVACGGYHTCA 122
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
++S G+LYTWGS+ENGCLG+GS + SPERV+G V +VSCGWKHTA IS G +
Sbjct: 123 ISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSEVSCGWKHTAVISGGNVF 182
Query: 363 TWGWGGSHGTFSEDGHSSGGQL----DRGQLTPS 392
TWGWGGS+GTFS+DG SSGGQL D L PS
Sbjct: 183 TWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLEPS 216
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 123/253 (48%), Gaps = 35/253 (13%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI-------PTKVECLSGIFTK 180
I+ G HS A+T DG++ WG NG+LG G +++ + P ++ L GI
Sbjct: 2 IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVC 61
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
+ A G S + G V ++G G +LG LG ++ +S P ++K+L V+
Sbjct: 62 KIAAGLLHSSCIDENGTVFTFGQGRMYQLG-------LGHMKDSS--VPSIVKDLPFVQ- 111
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--SKLP-YSEEVVCGG 297
++A G+ H+ I +G +Y +G + + A P + S LP + EV CG
Sbjct: 112 QVACGGY-HTCAISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSEVSCGW 170
Query: 298 YHTCVLTSGGELYTW---GSN---------ENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
HT V+ SGG ++TW GSN G LG+G+ P RVQ + + Q
Sbjct: 171 KHTAVI-SGGNVFTWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLEPSRVQFDRNFQAL-Q 228
Query: 346 VSCGWKHTAAISE 358
+SCG+ HTAAI E
Sbjct: 229 ISCGFNHTAAIFE 241
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 36/235 (15%)
Query: 43 WGNGDYGRLGLGSLESRWR---------PVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG G+ GRLG G S ++ P + E + +A G H+ + E G V+
Sbjct: 21 WGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCKIAAGLLHSSCIDENGTVF 80
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G QLG+ S+ P + L V Q++ G +H+ AI+ G+LY WG + NG
Sbjct: 81 TFGQGRMYQLGLGHMKDSSV-PSIVKDLPF-VQQVACGGYHTCAISSSGDLYTWGSSENG 138
Query: 154 QLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS------ 206
LGLG K+ + P P +VE L + + + G++ + AV GG V +WG GGS
Sbjct: 139 CLGLGSKS--LAPSPERVEGSLLPLHVSEVSCGWKHT-AVISGGNVFTWGWGGSNGTFSD 195
Query: 207 ------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LG G + L P ++ + + GF H+A I E
Sbjct: 196 DGFSSGGQLGLGNDFDYL---------EPSRVQFDRNFQALQISCGFNHTAAIFE 241
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 205/373 (54%), Gaps = 20/373 (5%)
Query: 31 ISSTLQRRFAAL-WGNGDYGRLGLGSLESR---WRPVVCSAFE------KHSLKALACGG 80
+ + +R + AL GNGD+GRLG GS + W P + F ++A+A GG
Sbjct: 17 VLTQYRREYIALSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGG 76
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
AH++FL G V+ GLN GQLG S + +S EP+ + L EVV ++ G H+ + V
Sbjct: 77 AHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVR-LDVEVVSVAAGNGHTLCVDV 135
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVL 199
DG ++ +GKN+ GQLG G IP K+ L+ Q A G E S+AV G+V
Sbjct: 136 DGCVWAFGKNTAGQLGTGNVDGT---IPRKIGALAKEARVAQVACGAEHSLAVADDGRVY 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTS--EYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWG+ G LGHG E+ G+ T+ E PRL++ LE KV AAG +HSACID+ G
Sbjct: 193 SWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRG 252
Query: 258 RVYIFGDRAVDKMLF--QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+Y +G +++ + +H PS + L + E+ CGG H+ T+ G + +WG+N
Sbjct: 253 NLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAG-VVSWGAN 311
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
++G LG G + S +++ GWKH+A I+ GK+ WG+GGS G++++
Sbjct: 312 QHGELGHGHHSDIKSAVPKPIKMGSRGWSKLAAGWKHSAGIANGKLFAWGFGGSMGSYAD 371
Query: 376 DGHSSGGQLDRGQ 388
+ SSGGQL G
Sbjct: 372 EKMSSGGQLGLGN 384
>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 198/358 (55%), Gaps = 16/358 (4%)
Query: 35 LQRRF---AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ RR A WGNGDYGRLG +S P + A ++ACGGAHT + G
Sbjct: 1 MARRLIGKVACWGNGDYGRLGHDCAKSLAVPSLVPALINQKFLSVACGGAHTAAVAVDGS 60
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND GQLG + +S++ + L + VQ++ G+ H+ +T ++ G N
Sbjct: 61 VFTWGLNDHGQLGHYTHQEFSMQEPQEVFLPEAAVQVAMGHSHTLFLTESSSVWAVGSNM 120
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+GQLGL ++ + +P +V+ L G A G + S+AV+ G++ +WG G LGH
Sbjct: 121 HGQLGLRRRGGQEW-VPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGH 179
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G+ S F + E PRL+K+L+G+ V+ AA G ++S C+D NG Y +G L
Sbjct: 180 GRSS----FAATQDESAPRLVKKLKGIMVQSAAGGLMNSGCVDANGAAYFWGPYLRQSPL 235
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ A P ++S + +++ GG H LT GG + T+G++E G LG+GS D P
Sbjct: 236 TKAATEANEPEVLSGVQNVKQLALGGRHLVALTHGGRVATYGTSEYGLLGLGSSD---PP 292
Query: 332 ERVQGPF-SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS---EDGHSSGGQL 384
Q + ++QV+ GW+H+A + S+G++LTWGWGGS G+ S D S+GGQL
Sbjct: 293 SPFQPTLIPDVSLEQVAAGWQHSAGVTSDGQLLTWGWGGSVGSESGLFPDQTSAGGQL 350
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 198/363 (54%), Gaps = 22/363 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
RR A +GNGD GRLG SLE S P V A LKA+ACGGAHT + ++G VY
Sbjct: 2 RRVLATFGNGDCGRLGH-SLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYT 60
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GLND GQLG P ++ + + VV +S GY+H+ + G ++ +G N GQ
Sbjct: 61 WGLNDKGQLGHDSEDSEVGLPGEVA-MPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQ 119
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LGLGK ++ P V+ L A G E S+A+T GG+V SWG +GRLGHG
Sbjct: 120 LGLGKDVV-LVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSA 178
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ F S+ E+ PRL++ E ++V+ +AG +HSA + G +++G ++ F
Sbjct: 179 TPRRLF-GSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGS 237
Query: 275 GNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P+++ L S V CG H+ L GG + WG+N+NG LG G E+
Sbjct: 238 DEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGH-------EK 290
Query: 334 VQGPFSESPV-----DQVSCGWKHTAAIS-EGKILTWGWGGSHGT-FSEDGHS-SGGQLD 385
Q P S V +Q++ GWKH+AA++ GK+ TWGWGGS GT S +G + +GGQL
Sbjct: 291 QQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLG 350
Query: 386 RGQ 388
G
Sbjct: 351 HGN 353
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 199/369 (53%), Gaps = 17/369 (4%)
Query: 34 TLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--------ACGGAHTL 84
+ R F AL GNGD+GRLG G + + S+ H ++ L A GGAH++
Sbjct: 20 STSRAFTALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSI 79
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
FL G V+A GLN++GQLG ++ + E + L EVV+++ G +H+ + VDG +
Sbjct: 80 FLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVD-LDVEVVRVAAGNNHTLCVDVDGGV 138
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ +GKN GQLG G P + L G A+ G E S+A++ +V SWG
Sbjct: 139 WAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVAS-GAEHSLALSEDARVYSWGTS 197
Query: 205 GSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G LGHG E+ G+ T++ PRL++ L KV+ AAG +HSAC+DE G ++ +
Sbjct: 198 ADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELFTW 257
Query: 263 GDRAVDKM--LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G +++ + +H P + L + +V CGG HT TS G + +WG+N++G L
Sbjct: 258 GQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAG-VVSWGANQHGEL 316
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 379
G GS S S ++S GWKH+A +S +GK+ WG+GGS G+ S++ S
Sbjct: 317 GHGSNSDAKSAIPKPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLS 376
Query: 380 SGGQLDRGQ 388
SGGQL G
Sbjct: 377 SGGQLGLGN 385
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 194/359 (54%), Gaps = 30/359 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG ++ P++ A + ++CG HT+ LT+ G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K+V Q++ G +H++A+TV GELY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEN 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ VE + G++ +Q A G +V + V +WG +G GHG S
Sbjct: 125 GH--STPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSG----- 177
Query: 222 RSTSEYTPRLIKELEGVKVK-IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y+P + EL + +K I+A GF H+A + ENG+V+ FG+ ++ G+++ R
Sbjct: 178 ---HQYSPYCVSELVEINIKQISACGF-HTAALSENGQVFTFGEGKFGRL----GHNSER 229
Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
++K + ++V CGG+HT +T G ++TWG E+G LG G P RV
Sbjct: 230 NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRV 289
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
+ ++ + Q++CGW HT A+++ G++ TWG G HG GH+ ++ +L +
Sbjct: 290 ESLIDKNII-QLTCGWSHTVALTDKGEVFTWG-NGDHGKL---GHNDTNKVTEPKLIET 343
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 118/241 (48%), Gaps = 20/241 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + PI VE L T Q + G +V +T GKV +WG
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPIL--VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL+++L KV+ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ N PSL+ + Y +V CG HT VL ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSG 171
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVS-CGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
G E + Q+S CG+ HTAA+SE G++ T+G G F GH+
Sbjct: 172 HGDTSGHQYSPYCVSELVEINIKQISACGF-HTAALSENGQVFTFG----EGKFGRLGHN 226
Query: 380 S 380
S
Sbjct: 227 S 227
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 150/317 (47%), Gaps = 15/317 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G ++ P + ++ + CG HT +T +G +Y G +G+
Sbjct: 58 WGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGK 117
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G+S L S V Q++ G H+ + + ++Y WG NG G G +
Sbjct: 118 LGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSG 177
Query: 163 KVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V L I KQ +A GF + A++ G+V ++G G GRLGH E
Sbjct: 178 HQYS-PYCVSELVEINIKQISACGF-HTAALSENGQVFTFGEGKFGRLGHNSER------ 229
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ + I L G ++K A G H+A + E+G V+ +G ++ + + P
Sbjct: 230 ---NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIP 286
Query: 282 SLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
+ + L ++ CG HT LT GE++TWG+ ++G LG + + P+ ++ F+
Sbjct: 287 TRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIE-TFN 345
Query: 340 ESPVDQVSCGWKHTAAI 356
V V+ +HT A+
Sbjct: 346 SKRVISVASYNEHTVAL 362
>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
Length = 526
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 192/370 (51%), Gaps = 32/370 (8%)
Query: 44 GNGDYGRLGLGSLESRWRP---VVCSAFEKHS-------LKALACGGAHTLFLTETGCVY 93
GNGD+GRLG G + R R + F++ + + + + GG+HT +T G VY
Sbjct: 121 GNGDFGRLGHGG-DGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTADGAVY 179
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNS 151
GLN+ GQLG S + GY +SGL + VV +S G+HH+ +T GEL+ WG+N
Sbjct: 180 TCGLNEHGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRND 239
Query: 152 NGQLGLGKKAAKVIPIPTKVECLS-------GIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Q GLG A V+P+P + S G AA G ++AVT G V +WG G
Sbjct: 240 ASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAA-GPRHNLAVTDRGAVYTWGDG 298
Query: 205 GSGRLGHG-QESSILGFL-RSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVY 260
G LGHG ES GF R T+E PRL++ L +G++V AAAG HS C+D G V+
Sbjct: 299 KEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVH 358
Query: 261 IFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+G +++ N P+ + L ++ GG + + G + +WG+N N
Sbjct: 359 AWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGN 418
Query: 318 GCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
G LG+G+ + P V P + + S GW+H AA S+G++ TWGW GS G
Sbjct: 419 GELGLGNSNDKRGDVPRLVHNP-NAASFASASAGWRHAAATSSDGRLWTWGWSGSVGQHG 477
Query: 375 EDGHSSGGQL 384
D S+GGQL
Sbjct: 478 VDADSTGGQL 487
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 45/297 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-------SAFEKH-SLKALACGGAHTLFLTETGCVYA 94
WG D + GLGS P+ A H ++ ++A G H L +T+ G VY
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYT 294
Query: 95 TGLNDFGQLGISENIGY----------SLEPLRISGLKK---EVVQISTGYHHSSAITVD 141
G G LG + + P + L EV + G HS +
Sbjct: 295 WGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRT 354
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G ++ WG+ QLG+G K A PT+V L + + A G +VAV G ++S
Sbjct: 355 GHVHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRV--RDLAAGGNFNVAVGADGSMIS 412
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WGA G+G LG G + G + PRL+ A+AG+ H+A +GR++
Sbjct: 413 WGANGNGELGLGNSNDKRGDV-------PRLVHNPNAASFASASAGWRHAAATSSDGRLW 465
Query: 261 IFG------------DRAVDKMLFQEGNHAR-RPSLISKLP-YSEEVVCGGYHTCVL 303
+G D ++ + G P+L+ LP ++ V CG HT +
Sbjct: 466 TWGWSGSVGQHGVDADSTGGQLGLRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAV 522
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 137/336 (40%), Gaps = 51/336 (15%)
Query: 61 RPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI- 118
RPV S +H + A++ G HT+ +TE G ++A G ND Q G+ S+ PL
Sbjct: 202 RPV--SGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGA-PSVVPLPAW 258
Query: 119 --------SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-------- 162
G V+ ++ G H+ A+T G +Y WG G LG G +
Sbjct: 259 ISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWRWGFWGR 318
Query: 163 -KVIPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P V L+ GI AA G SV V G V +WG G +LG G +++
Sbjct: 319 DTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVGAKNAPA- 377
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T+E P + L +V+ AAG + + +G + +G ++ N R
Sbjct: 378 ---FTTE--PTRVPALG--RVRDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSNDKR 430
Query: 280 --RPSLI--SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
P L+ G H +S G L+TWG +G +G +D + ++
Sbjct: 431 GDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWG--WSGSVGQHGVDADSTGGQLG 488
Query: 335 ----QGPFSESPV--------DQVSCGWKHTAAISE 358
Q F E + VSCG+ HT A+ E
Sbjct: 489 LRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAVLE 524
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V+S G G GRLGHG + L ++E R+ +G+ V A+AG H+A + +
Sbjct: 116 RVVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTAD 175
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
G VY G L + P L +S LP + VV G +HT +T GGEL+
Sbjct: 176 GAVYTCGLNE-HGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWA 234
Query: 312 WGSNE-NGC-LGIGSIDVLHSPERVQ-----GPFSESPVDQVSCGWKHTAAISE-GKILT 363
WG N+ + C LG G+ V+ P + P + V V+ G +H A+++ G + T
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYT 294
Query: 364 WG 365
WG
Sbjct: 295 WG 296
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 180/340 (52%), Gaps = 27/340 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV A + + +ACG HT+ LT+ G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K + Q++ G +H++A+TV G+LY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P VE L G+ +Q A G +V + V +WG +G GHG
Sbjct: 125 GHSTPFL--VETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y P ++EL G V+I+A GF H+A + E G V+ FG+ ++ G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKNIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229
Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+++ + ++V CGG+HT +T GE+YTWG E+G LG G P RV
Sbjct: 230 NQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
+ E V Q++CGW HT A+++ G++ TWG G HG
Sbjct: 290 E-SLVEKLVVQITCGWSHTVALTDTGEVYTWG-NGDHGKL 327
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + P+P ++ L+ Q A G +V +T G+V +WG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL++EL G ++ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ P L+ L +V CG HT VL ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171
Query: 322 IGSID-VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
G + + P V+ ++ V +CG+ HTAA+SE G++ T+G G F GH+
Sbjct: 172 HGDTEGHQYLPCPVEELRGKNIVQISACGF-HTAALSEFGEVFTFG----EGKFGRLGHN 226
Query: 380 S 380
S
Sbjct: 227 S 227
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 14/266 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G+ P + + ++ +ACG HT+ L E VY G + G
Sbjct: 110 WGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + G+ P + L+ K +VQIS H++A++ GE++ +G+ G+LG +
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ VE L+G KQ A G + AVT G+V +WG G G+LGHG +
Sbjct: 230 NQ--PVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK------- 280
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ P ++ L V G+ H+ + + G VY +G+ K+ + P
Sbjct: 281 --VNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLP 338
Query: 282 SLISKLPYSEEVVCGGY--HTCVLTS 305
L+ L + Y HT L
Sbjct: 339 KLVDVLEGKRVISVASYNEHTVALVD 364
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 12/220 (5%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L+ + WG+ + G G G E ++ P ++ ++ G HT L+E G V+
Sbjct: 154 LENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVF 213
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G FG+LG + + + K V Q++ G H++A+T GE+Y WG +G
Sbjct: 214 TFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHG 273
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G K K +P T+VE L Q G+ +VA+T G+V +WG G G+LGH
Sbjct: 274 QLGHGDKVNKTVP--TRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHND 331
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ + P+L+ LEG +V A+ H+ +
Sbjct: 332 TTKVT---------LPKLVDVLEGKRVISVASYNEHTVAL 362
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 183/351 (52%), Gaps = 30/351 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV A + + +ACG HT+ LTE G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K + Q++ G +H++A+TV G+LY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P VE L + +Q A G +V + V +WG +G GHG
Sbjct: 125 GH--STPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y P ++EL G V+I+A GF H+A + E G V+ FG+ ++ G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKSIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229
Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+++ + ++V CGG+HT +T GE+YTWG E+G LG G P RV
Sbjct: 230 NQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
+ E V Q++CGW HT +++ G++ TWG G HG GH+ ++
Sbjct: 290 ESLL-EKLVLQITCGWSHTVTLTDTGEVYTWG-NGDHGKL---GHNDTAKV 335
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + P+P ++ L+ Q A G +V +T G+V +WG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL++EL G ++ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ P L+ L + +V CG HT VL ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171
Query: 322 IGSID-VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
G + + P V+ +S V +CG+ HTAA+SE G++ T+G G F GH+
Sbjct: 172 HGDTEGHQYLPCPVEELRGKSIVQISACGF-HTAALSEFGEVFTFG----EGKFGRLGHN 226
Query: 380 S 380
S
Sbjct: 227 S 227
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L+ + WG+ + G G G E ++ P S+ ++ G HT L+E G V+
Sbjct: 154 LENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVF 213
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G FG+LG + + + K V Q++ G H++A+T GE+Y WG +G
Sbjct: 214 TFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHG 273
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G K K +P T+VE L Q G+ +V +T G+V +WG G G+LGH
Sbjct: 274 QLGHGDKVNKTVP--TRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHND 331
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ + P+ + L+G +V A+ H+ +
Sbjct: 332 TAKVT---------LPKPVDVLDGKRVISVASYNEHTVAL 362
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 180/349 (51%), Gaps = 24/349 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P+V SA + + ++ CG HT +E T VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I GLK E+ QI+ G H AIT DGE++ WG+N NGQLGLG
Sbjct: 98 RLG-HGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGH- 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + +P KV GI K A G E + AVT GK+ WG G G LG G + L
Sbjct: 156 -TEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRL-- 212
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + G K+ + A G+ H+ + +G +Y FG ++ +
Sbjct: 213 -------VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLV 265
Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L + V GG+ HT L GELY WG N+ G +G G+ D +SP+ + G
Sbjct: 266 PHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIV 325
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
+E V +V+CGW+HT AI++ G + +WG GT + GH G +DR
Sbjct: 326 NEK-VTRVTCGWRHTVAITDRGNVYSWG----RGTSGQLGH--GDAVDR 367
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 159/325 (48%), Gaps = 20/325 (6%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
CS + + +++ G +HT+ L V + G + GQLG + L PL IS L
Sbjct: 6 AACSGGPRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALD 64
Query: 123 K-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
E+ I+ G H++A + +Y WG G+LG G + + IP ++ L G+ K
Sbjct: 65 DCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSD--LFIPRAIKGLKGLEIK 122
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G +A+TG G+V SWG +G+LG G +L P + EG+ V
Sbjct: 123 QIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVL---------VPNKVAAFEGIAV 173
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGY 298
K+ AAG H+A + E+G++Y +G + + N P ++ +P + V CG
Sbjct: 174 KMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWR 233
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT + + G LYT+G ++ G LG G + P +VQ + VS GW+HT A+ E
Sbjct: 234 HTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQ-ALKNKTIQAVSGGWRHTVALDE 292
Query: 359 -GKILTWGWG--GSHGTFSEDGHSS 380
G++ WGW G G + D H+S
Sbjct: 293 DGELYGWGWNKFGQVGCGNTDDHNS 317
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 19/303 (6%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R WG GD+GRLG G+ + P + +K +ACG +H L +T G V++ G
Sbjct: 86 RTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGR 145
Query: 98 NDFGQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQ 154
N GQLG+ +E++ L P +++ + V+ ++ G H++A+T G+LY WG G
Sbjct: 146 NQNGQLGLGHTEDV---LVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGN 202
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LGLG + ++ +P +V + G A G+ ++AV G + ++G G+LGHG
Sbjct: 203 LGLGDRNDRL--VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDF 260
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L P ++ L+ ++ + G+ H+ +DE+G +Y +G ++
Sbjct: 261 EDHL---------VPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGN 311
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ P LI+ + + V CG HT +T G +Y+WG +G LG G P+
Sbjct: 312 TDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPK 371
Query: 333 RVQ 335
R++
Sbjct: 372 RIE 374
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + +++A++ G HT+ L E G +Y G N FGQ+G
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGN 311
Query: 108 NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
++ P I+G+ E V +++ G+ H+ AIT G +Y WG+ ++GQLG G +
Sbjct: 312 TDDHN-SPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC-- 368
Query: 167 IPTKVECLS 175
+P ++E LS
Sbjct: 369 VPKRIELLS 377
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 175/349 (50%), Gaps = 24/349 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P + SA + + ++ CG HT L+ T VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I LK EV QI+ G H AIT DGE+ WG+N NGQLGLG
Sbjct: 98 RLGHG-NSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGH- 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P K+ G+ K A G E + AVT GK+ WG G G LG G L
Sbjct: 156 -TEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRL-- 212
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + G +K+ A G+ H+ C+ E+G +Y FG ++ +
Sbjct: 213 -------VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI 265
Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L + + + GG+ HT L S G LY WG N+ G +G G+ + SP+ V+G
Sbjct: 266 PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG-L 324
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
+ V V CGW+HT A+++ G + +WG GT + GH G +DR
Sbjct: 325 QDQVVTVVQCGWRHTLAMTDRGNVYSWG----RGTSGQLGH--GDTVDR 367
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 152/300 (50%), Gaps = 23/300 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQ 150
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ +E++ L P +++ + V+ ++ G H++A+T +G+LY WG G LGLG
Sbjct: 151 LGLGHTEDV---LTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGD 207
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ ++ +P +V ++G K A G+ ++ V G + ++G G+LGHG + L
Sbjct: 208 REDRL--VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHL- 264
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L+ K++ G+ H+ +D +GR+Y +G ++
Sbjct: 265 --------IPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQS 316
Query: 280 RPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P L+ L ++VV CG HT +T G +Y+WG +G LG G +P+R++
Sbjct: 317 SPQLVKGL--QDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIE 374
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 20/264 (7%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G++++V+ +S G HS A+ + WG+ +GQLG G A+ PT V L
Sbjct: 11 GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGD--AEERHFPTIVSALDDCEI 68
Query: 180 KQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
G + + A++ K V SWG G GRLGHG S + + P+ IK L+G+
Sbjct: 69 SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDL---------FIPQPIKALKGL 119
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCG 296
+VK A G H I +G V +G ++ P ++ + + G
Sbjct: 120 EVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAG 179
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT +T G+LY WG G LG+G + P++V E + V+CGW+HT +
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGE-LMKMVACGWRHTICV 238
Query: 357 SE-GKILTWGWGG----SHGTFSE 375
+E G + T+GW HG F++
Sbjct: 239 AESGNMYTFGWSKYGQLGHGDFAD 262
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P A + ++A+ G HT L G +Y G N FGQ+G
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG- 310
Query: 108 NIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N P + GL+ +VV + G+ H+ A+T G +Y WG+ ++GQLG G +
Sbjct: 311 NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDR--S 368
Query: 167 IPTKVECLS 175
P ++E LS
Sbjct: 369 TPKRIEILS 377
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 185/351 (52%), Gaps = 28/351 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT +E+ VY+ G DFG
Sbjct: 40 WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFG 99
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + GL+ + QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 100 RLGHGNSSDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 158 TEDSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL- 214
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + +EGVK+ A G+ H+ + +G +Y +G ++ +
Sbjct: 215 --------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL 266
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQG 336
P + L + E+ G HT LTS G+LY WG N+ G +G+G +V H SP +V+
Sbjct: 267 TPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKF 325
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLDR 386
P E V +SCGW+HT A++E + + +WG GT + GH G +DR
Sbjct: 326 PH-EQKVVHISCGWRHTLAVTERQNVFSWG----RGTNGQLGH--GESIDR 369
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 132/304 (43%), Gaps = 64/304 (21%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP---------- 166
+S + V+ IS G HS A+ + WG+ +GQLG G ++ P
Sbjct: 10 EVSAPVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHE 69
Query: 167 -----------------------------------------IPTKVECLSGIFTKQAALG 185
P ++ L G+ KQ A G
Sbjct: 70 VVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACG 129
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+AVT G+V SWG +G+LG G L P+ I+ +GV VK+ AA
Sbjct: 130 DSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSVKMVAA 180
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
G H+A + E+G +Y +G + + N P +S + + +V CG HT +
Sbjct: 181 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV 240
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+S G LYT+G ++ G LG G + +P +++ E+ + ++S GW+HT A+ S+GK+
Sbjct: 241 SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGKLY 299
Query: 363 TWGW 366
WGW
Sbjct: 300 GWGW 303
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A +++ + ++ G HT+ LT G +Y G N FGQ+G+ +
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 313
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+++ +++VV IS G+ H+ A+T ++ WG+ +NGQLG G+ +
Sbjct: 314 NVDH-CSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDR--N 370
Query: 167 IPTKVECLS 175
IP +E LS
Sbjct: 371 IPKMIEVLS 379
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 177/339 (52%), Gaps = 20/339 (5%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVY 93
L A WG G+ G+LG G E R +P + S A+ G +++ L++ VY
Sbjct: 30 LSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVY 89
Query: 94 ATGLNDFGQLGISE-NIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G DFG+LG + N + +P+R ++G + +V+++ G H+ A+T GEL+ +G+N
Sbjct: 90 SWGWGDFGRLGHGDCNDVFIPQPIRALAG--RNIVKVACGDTHTLAVTDTGELFSFGRNQ 147
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLGLG + ++P P VE L G A G E S+A T G V +WG G G LG
Sbjct: 148 NGQLGLGTTSDAILPQP--VESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGV 205
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + P + LEGVKV A G+ HS DE G VY FG ++
Sbjct: 206 GPPED---------RHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLG 256
Query: 272 FQEGNHARRPSLISKLPYSEEV-VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ P + L S V + GG+ HT G+LY+WG N+ G LGIGS +
Sbjct: 257 HGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSN 316
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+P VQG + SPV +SCGW+HT A++E G + +WG G
Sbjct: 317 APVPVQG-LNTSPVKLLSCGWRHTFAVTEAGDVFSWGRG 354
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 15/295 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A ++ +ACG HTL +T+TG +++ G N GQ
Sbjct: 91 WGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ P + L+ +EV I+ G HS A T G+++ WG G LG+G
Sbjct: 151 LGLG-TTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPE 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P++V L G+ A G+ S+A G V ++G G+LGHG
Sbjct: 210 DR--HLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGD-------- 259
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P+ ++ L+ ++ + A G+ H++ D++G++Y +G ++ + P
Sbjct: 260 -CIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAP 318
Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ L S + + CG HT +T G++++WG NG LG ++P R+
Sbjct: 319 VPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRL 373
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 16/247 (6%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
V +S G HS A+ +G WG+ +GQLG G A+ P + L
Sbjct: 15 RVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD--AEERKKPRAIFHLMQASCSAVC 72
Query: 184 LGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G E SVA++ +V SWG G GRLGHG + + + P+ I+ L G +
Sbjct: 73 SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDV---------FIPQPIRALAGRNIVK 123
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
A G H+ + + G ++ FG ++ + A P + L E + CGG H+
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHS 183
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
TS G+++ WG G LG+G + H P +V G V V+CGW+H+ A E G
Sbjct: 184 LAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTSVACGWRHSIAADETG 242
Query: 360 KILTWGW 366
+ T+GW
Sbjct: 243 AVYTFGW 249
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+S + + G S+A+ G LSWG G G+LGHG + PR I
Sbjct: 11 VSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD---------AEERKKPRAIF 61
Query: 234 ELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L +G +S + + VY +G ++ + N P I L
Sbjct: 62 HLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNI 121
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG HT +T GEL+++G N+NG LG+G+ P+ V+ V ++CG
Sbjct: 122 VKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVES-LRGQEVTSIACGG 180
Query: 351 KHT-AAISEGKILTWGWG 367
+H+ AA S G + WGWG
Sbjct: 181 EHSLAATSAGDVFAWGWG 198
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 177/334 (52%), Gaps = 22/334 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ ++ ++ CG HT +E VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96
Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+L G S ++ ++ +P++ + GLK + QI+ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG 153
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P K++ + K A G E + AVT G + WG G G LG G + L
Sbjct: 154 TTEDSL--LPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 211
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P + +EG K+ + A G+ H+ + ++G +Y +G ++ +
Sbjct: 212 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262
Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ D SP +V
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
P + + QV+CGW+HT A+SE K + +WG G S
Sbjct: 323 P-EDQKISQVACGWRHTLALSEKKNVFSWGRGTS 355
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 17/293 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 90 WGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 150 LGLG-TTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 208
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 209 DRL--LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL--- 263
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + G++Y +G ++ + P
Sbjct: 264 ------VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSP 317
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+S P + +V CG HT L+ +++WG +G LG G I ++P
Sbjct: 318 GQVS-FPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTP 369
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 141/319 (44%), Gaps = 68/319 (21%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP---------------- 166
+ VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 13 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVIC 72
Query: 167 -----------------------------------IPTKVECLSGIFTKQAALGFEQSVA 191
P V+ L G+ KQ A G +A
Sbjct: 73 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLA 132
Query: 192 VTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
VT G+V SWG +G+LG G E S+L P+ I+ E V VK+ AAG H+
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFESVCVKMIAAGAEHT 182
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGE 308
A + E+G +Y +G + + N P +S + + V+ CG HT ++ G
Sbjct: 183 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 242
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
LYT+G ++ G LG G + P +V+ +S + Q+S GW+HT A+ SEGK+ WGW
Sbjct: 243 LYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQISGGWRHTMALTSEGKLYGWGWN 301
Query: 368 --GSHGTFSEDGHSSGGQL 384
G G + D HSS GQ+
Sbjct: 302 KFGQVGVGNNDDHSSPGQV 320
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + ++ ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 251 YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGN 310
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N +S P ++S +++ Q++ G+ H+ A++ ++ WG+ ++GQLG G+ + P
Sbjct: 311 NDDHS-SPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTP 369
Query: 167 I 167
+
Sbjct: 370 V 370
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 177/334 (52%), Gaps = 22/334 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFG 97
Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+L G S ++ ++ +P++ + GLK + QI+ G H A+T+ G++ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG 154
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P K++ G+ K A G E + AVT G + WG G G LG G + L
Sbjct: 155 TTEDSL--LPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 212
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P + +EG K+ + A G+ H+ + ++G +Y +G ++ +
Sbjct: 213 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 263
Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ D SP +V
Sbjct: 264 LVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHF 323
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
P + + QV+CGW+HT A+SE K + +WG G S
Sbjct: 324 P-EDQKISQVACGWRHTLALSEKKNVFSWGRGTS 356
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 17/293 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 151 LGLG-TTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 210 DRL--LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + G++Y +G ++ + P
Sbjct: 265 ------VPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSP 318
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ P + +V CG HT L+ +++WG +G LG G I ++P
Sbjct: 319 VQV-HFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTP 370
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 140/319 (43%), Gaps = 68/319 (21%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP---------------- 166
+ VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 14 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVIC 73
Query: 167 -----------------------------------IPTKVECLSGIFTKQAALGFEQSVA 191
P V+ L G+ KQ A G +A
Sbjct: 74 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLA 133
Query: 192 VTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
VT G+V SWG +G+LG G E S+L P+ I+ EGV VK+ AAG H+
Sbjct: 134 VTMAGQVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGVCVKMIAAGAEHT 183
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGE 308
A + E+G +Y +G + + N P +S + + V+ CG HT ++ G
Sbjct: 184 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 243
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
LYT+G ++ G LG G + P +++ +S + Q+S GW+HT A+ SEGK+ WGW
Sbjct: 244 LYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSTISQISGGWRHTMALTSEGKLYGWGWN 302
Query: 368 --GSHGTFSEDGHSSGGQL 384
G G + D H S Q+
Sbjct: 303 KFGQVGVGNNDDHCSPVQV 321
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + G+C + I++ + A WG G YG LGLG R P S+ E
Sbjct: 164 KIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 223
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
+ +ACG HT+ ++++G +Y G + +GQLG + + L P ++ LK + QIS
Sbjct: 224 KMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSTISQISG 282
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T +G+LY WG N GQ+G+G P+ +V Q A G+ ++
Sbjct: 283 GWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPV--QVHFPEDQKISQVACGWRHTL 340
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVK----IAA 244
A++ V SWG G SG+LG+G+ TP LI L +G K A
Sbjct: 341 ALSEKKNVFSWGRGTSGQLGNGE---------IVDRNTPVLIDALSTDGSGCKKLESSTA 391
Query: 245 AGFLHSACIDENGRVYIFGDRAVDK 269
A F + + R I D V K
Sbjct: 392 APFAAKVWVSPSERYAIVPDENVPK 416
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 166/330 (50%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 28 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 88 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 256 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 315 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 344
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 81 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 140
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 141 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 199
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 200 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 254
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 255 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 306
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
S + + P ++VV CG HT +T ++ WG NG LGIG S+D
Sbjct: 307 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 356
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 117/248 (47%), Gaps = 16/248 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQIVSV 61
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + +VA + G +V SWG G GRLGHG S + +TP IK L G+++K
Sbjct: 62 TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRIK 112
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
A G H + G V +G ++ + + P I + V G H
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
T +T G+LY WG G LG+G PERV E + V+CGW+HT ++S
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHTISVSYS 231
Query: 359 GKILTWGW 366
G + T+GW
Sbjct: 232 GALYTYGW 239
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SVA+ G V SWG G G+LGHG + +P + L+G ++
Sbjct: 12 GASHSVALLSGDIVCSWGRGEDGQLGHGD---------AEDRPSPTQLSALDGHQIVSVT 62
Query: 245 AGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-------EEVVCG 296
G H+ ++G VY +G ++ H L + LP +++ CG
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRL-----GHGNSSDLFTPLPIKALHGIRIKQIACG 117
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
H +T GE+ +WG N+NG LG+G + P+++Q F + V+ G +HTAA+
Sbjct: 118 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAV 176
Query: 357 SE-GKILTWGWG 367
+E G + WGWG
Sbjct: 177 TEDGDLYGWGWG 188
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G LE P A + ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 301
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P+++ ++VVQ+S G+ H+ A+T ++ WG+ +NGQLG+G+ +
Sbjct: 302 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 358
Query: 167 IPTKVECLS 175
P +E LS
Sbjct: 359 FPKIIEALS 367
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 166/330 (50%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 40 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 99
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 100 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 158
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 159 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 210
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 211 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 267
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 268 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 326
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 327 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 356
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 93 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 152
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 153 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 211
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 212 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 266
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 267 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 318
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
S + + P ++VV CG HT +T ++ WG NG LGIG S+D
Sbjct: 319 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 368
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 10 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 67
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 68 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 118
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 119 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 178
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
G HT +T G+LY WG G LG+G PERV E + V+CGW+HT
Sbjct: 179 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHT 237
Query: 354 AAIS-EGKILTWGW 366
++S G + T+GW
Sbjct: 238 ISVSYSGALYTYGW 251
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +V P KV +S G SVA+ G V SWG G G+LGHG
Sbjct: 8 ADEVTAPPRKVLIISA--------GASHSVALLSGDIVCSWGRGEDGQLGHGD------- 52
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHAR 279
+ +P + L+G ++ G H+ ++G VY +G ++ H
Sbjct: 53 --AEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRL-----GHGN 105
Query: 280 RPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
L + LP +++ CG H +T GE+ +WG N+NG LG+G + P+
Sbjct: 106 SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQ 165
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++Q F + V+ G +HTAA++E G + WGWG
Sbjct: 166 KIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWG 200
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G LE P A + ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 254 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 313
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P+++ ++VVQ+S G+ H+ A+T ++ WG+ +NGQLG+G+ +
Sbjct: 314 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 370
Query: 167 IPTKVECLS 175
P +E LS
Sbjct: 371 FPKIIEALS 379
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 166/330 (50%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 28 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 88 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 256 PHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 315 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 344
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 81 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 140
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 141 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 199
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 200 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 254
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + GF H+ + +G++Y +G ++ GN+ +
Sbjct: 255 ------IPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 306
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
S + + P ++VV CG HT +T ++ WG NG LGIG S+D
Sbjct: 307 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 356
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 117/248 (47%), Gaps = 16/248 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQIVSV 61
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + +VA + G +V SWG G GRLGHG S + +TP IK L G+++K
Sbjct: 62 TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRIK 112
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
A G H + G V +G ++ + + P I + V G H
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
T +T G+LY WG G LG+G PERV E + V+CGW+HT ++S
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHTISVSYS 231
Query: 359 GKILTWGW 366
G + T+GW
Sbjct: 232 GALYTYGW 239
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SVA+ G V SWG G G+LGHG + +P + L+G ++
Sbjct: 12 GASHSVALLSGDIVCSWGRGEDGQLGHGD---------AEDRPSPTQLSALDGHQIVSVT 62
Query: 245 AGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-------EEVVCG 296
G H+ ++G VY +G ++ H L + LP +++ CG
Sbjct: 63 CGADHTVAYSQSGMEVYSWGWGDFGRL-----GHGNSSDLFTPLPIKALHGIRIKQIACG 117
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
H +T GE+ +WG N+NG LG+G + P+++Q F + V+ G +HTAA+
Sbjct: 118 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAV 176
Query: 357 SE-GKILTWGWG 367
+E G + WGWG
Sbjct: 177 TEDGDLYGWGWG 188
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G LE P A + ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGN 301
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P+++ ++VVQ+S G+ H+ A+T ++ WG+ +NGQLG+G+ +
Sbjct: 302 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 358
Query: 167 IPTKVECLS 175
P +E LS
Sbjct: 359 FPKIIEALS 367
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 166/330 (50%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 355
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
S + + P ++VV CG HT +T ++ WG NG LGIG S+D
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 367
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
G HT +T G+LY WG G LG+G PERV E + V+CGW+HT
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHT 236
Query: 354 AAIS-EGKILTWGW 366
++S G + T+GW
Sbjct: 237 ISVSYSGALYTYGW 250
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +V P KV +S G SVA+ G V SWG G G+LGHG
Sbjct: 7 ADEVTAPPRKVLIISA--------GASHSVALLSGDIVCSWGRGEDGQLGHGD------- 51
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHAR 279
+ +P + L+G ++ G H+ ++G VY +G ++ H
Sbjct: 52 --AEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRL-----GHGN 104
Query: 280 RPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
L + LP +++ CG H +T GE+ +WG N+NG LG+G + P+
Sbjct: 105 SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQ 164
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++Q F + V+ G +HTAA++E G + WGWG
Sbjct: 165 KIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWG 199
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G LE P A + ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P+++ ++VVQ+S G+ H+ A+T ++ WG+ +NGQLG+G+ +
Sbjct: 313 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 369
Query: 167 IPTKVECLS 175
P +E LS
Sbjct: 370 FPKIIEALS 378
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 166/330 (50%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 355
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
S + + P ++VV CG HT +T ++ WG NG LGIG S+D
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 367
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 121/255 (47%), Gaps = 18/255 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEE 292
G+++K A G H + G V +G ++ + + P I +P +
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPI-KM 176
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V G HT +T G+LY WG G LG+G PERV E + V+CGW+H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRH 235
Query: 353 TAAIS-EGKILTWGW 366
T ++S G + T+GW
Sbjct: 236 TISVSYSGALYTYGW 250
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 32/216 (14%)
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +V P KV +S G SVA+ G V SWG G G+LGHG
Sbjct: 7 ADEVTAPPRKVLIISA--------GASHSVALLSGDIVCSWGRGEDGQLGHGD------- 51
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHAR 279
+ +P + L+G ++ G H+ ++G VY +G ++ H
Sbjct: 52 --AEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRL-----GHGN 104
Query: 280 RPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
L + LP +++ CG H +T GE+ +WG N+NG LG+G + P+
Sbjct: 105 SSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQ 164
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++Q F P+ V+ G +HTAA++E G + WGWG
Sbjct: 165 KIQA-FEGIPIKMVAAGAEHTAAVTEDGDLYGWGWG 199
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G LE P A + ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P+++ ++VVQ+S G+ H+ A+T ++ WG+ +NGQLG+G+ +
Sbjct: 313 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 369
Query: 167 IPTKVECLS 175
P +E LS
Sbjct: 370 FPKIIEALS 378
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 167/330 (50%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G + L
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 355
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 20/290 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
S + + P ++VV CG HT +T ++ WG NG LGIG S+D
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 367
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ + V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 9 EVTAPPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
G HT +T G+LY WG G LG+G + PERV E + V+CGW+HT
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK-MSMVACGWRHT 236
Query: 354 AAIS-EGKILTWGW 366
++S G + T+GW
Sbjct: 237 ISVSYSGALYTYGW 250
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 24/192 (12%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SVA+ G V SWG G G+LGHG + +P + L+G ++
Sbjct: 23 GASHSVALLSGDIVCSWGRGEDGQLGHGD---------AEDRPSPTQLSALDGHQIVSVT 73
Query: 245 AGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-------EEVVCG 296
G H+ ++G VY +G ++ H L + LP +++ CG
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRL-----GHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
H +T GE+ +WG N+NG LG+G + P+++Q F + V+ G +HTAA+
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAV 187
Query: 357 SE-GKILTWGWG 367
+E G + WGWG
Sbjct: 188 TEDGDLYGWGWG 199
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G LE P A + ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P+++ ++VVQ+S G+ H+ A+T ++ WG+ +NGQLG+G+ +
Sbjct: 313 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 369
Query: 167 IPTKVECLS 175
P +E LS
Sbjct: 370 FPKIIEALS 378
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ G H+ L SG + +WG E+G LG G + SP ++ + V+CG H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA-LDGHQIVSVTCGADH 78
Query: 353 TAAISEG--KILTWGWGGSHGTFSEDGHSSGGQL 384
T A S+ ++ +WGW G F GH + L
Sbjct: 79 TVAYSQSGMEVYSWGW----GDFGRLGHGNSSDL 108
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 166/330 (50%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +E+ VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G + L
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLV 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 267 PHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIP- 325
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 355
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------VPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + ++P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 318 SPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 114/248 (45%), Gaps = 16/248 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ V+ IS G HS A+ + WG+ +GQLG G ++ PT++ L
Sbjct: 15 RRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDDHQIVSV 72
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + +VA + +V SWG G GRLGHG S + +TP IK L G+++K
Sbjct: 73 TCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRIK 123
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
A G H + G V +G ++ + + P I + V G H
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 183
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
T +T G+LY WG G LG+G + PERV E + V+CGW+HT ++S
Sbjct: 184 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK-MSMVACGWRHTISVSYS 242
Query: 359 GKILTWGW 366
G + T+GW
Sbjct: 243 GALYTYGW 250
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L V+ QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ ++ + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRIPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ D
Sbjct: 365 -SLDRNFPKII---EALSVDGASGQHIESSNFD 393
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 38/219 (17%)
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +V P P +V +S G SVA+ G V SWG G G+LGHG L
Sbjct: 7 ADEVTPPPRRVLIISA--------GASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL-- 56
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF----GDRAVDKMLFQEGN 276
+P + L+ ++ G H+ E+ R+ ++ GD F
Sbjct: 57 -------SPTQLSALDDHQIVSVTCGADHTVAYSES-RMEVYSWGWGD-------FGRLG 101
Query: 277 HARRPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
H L + LP +++ CG H +T GE+ +WG N+NG LG+G +
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSL 161
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
P+++Q F + V+ G +HTAA++E G + WGWG
Sbjct: 162 VPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWG 199
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 178/347 (51%), Gaps = 28/347 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + P A ++ +ACG HT+ LT G V+ G D G+
Sbjct: 5 WGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGR 64
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P L ++V Q++ G +H++A+T +G+LY WG G+LG G +A
Sbjct: 65 LGHGDN-GWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEA 123
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P +VE L G Q A G + VT G + +WG +G GHG+
Sbjct: 124 GHA--TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG----- 176
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y PRL++ + +V +I+A GF H+A + + G ++ +G+ ++ +
Sbjct: 177 ---HQYLPRLLESMAAKRVAQISACGF-HTAIVTDAGELFTWGEGKFGRLGHMSERNCHS 232
Query: 281 PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQ 335
P+++ + +V CGG+HT V++ G LYT+G E+G LG +P E +
Sbjct: 233 PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALD 292
Query: 336 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
G F V Q++CGW H+ A++ +G + TWG G HG GH +G
Sbjct: 293 GMF----VSQITCGWSHSVALTVKGLVYTWG-NGDHGKL---GHGNG 331
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG+ +GQLGLG + + PT V+ L G+ +Q A G +V +T G+V +WG
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQ--DEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG +Y PR+ + L G V G H+A + NG +Y +G
Sbjct: 60 GDDGRLGHGDNG---------WKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWG 110
Query: 264 DRAVDKMLF-QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
K+ E HA P + L ++ CG HT ++T+ G LYTWG ENG
Sbjct: 111 GGMYGKLGHGDEAGHA-TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVA 169
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVS-CGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
G G + R+ + V Q+S CG+ HTA +++ G++ TWG G F GH
Sbjct: 170 GHGETEGHQYLPRLLESMAAKRVAQISACGF-HTAIVTDAGELFTWG----EGKFGRLGH 224
Query: 379 SS 380
S
Sbjct: 225 MS 226
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +GRLG S + P + + ++CGG HT ++E G +Y G + GQ
Sbjct: 214 WGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + + P + L V QI+ G+ HS A+TV G +Y WG +G+LG G
Sbjct: 274 LGHNDRVN-KMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGN-- 330
Query: 162 AKVIPIPTKVE 172
+ + +P VE
Sbjct: 331 GRKVAVPQAVE 341
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 163/330 (49%), Gaps = 18/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 30 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFG 89
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T +GE+ WG+N NGQLGLG
Sbjct: 90 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDT 148
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 149 EDSL--VPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 200
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K A G+ H+ + +G +Y +G ++ +
Sbjct: 201 ---TDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 257
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ SP +V+ P
Sbjct: 258 PHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 316
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ V QVSCGW+HT A++E + WG G
Sbjct: 317 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 346
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 20/290 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 83 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQ 142
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 143 LGLGDTED-SLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 201
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 202 DRL--VPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 256
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G H+ + +G++Y +G ++ GN+ +
Sbjct: 257 ------IPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGV--GNNLDQC 308
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
S + + P ++VV CG HT +T ++ WG NG LGIG S+D
Sbjct: 309 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 358
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 16/253 (6%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 1 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGH 58
Query: 178 FTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 59 QIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALH 109
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 110 GIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVA 169
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G HT +T G+LY WG G LG+G PERV E V+CGW+HT
Sbjct: 170 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-XSXVACGWRHTI 228
Query: 355 AIS-EGKILTWGW 366
++S G + T+GW
Sbjct: 229 SVSYSGALYTYGW 241
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
V P KV +S G SVA+ G V SWG G G+LGHG +
Sbjct: 1 VTAPPRKVLIISA--------GASHSVALLSGDIVCSWGRGEDGQLGHGD---------A 43
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHARRPS 282
+P + L+G ++ G H+ ++G VY +G ++ H
Sbjct: 44 EDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRL-----GHGNSSD 98
Query: 283 LISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
L + LP +++ CG H +T GE+ +WG N+NG LG+G + P+++Q
Sbjct: 99 LFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 158
Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
F + V+ G +HTAA++E G + WGWG
Sbjct: 159 A-FEGIRIKXVAAGAEHTAAVTEDGDLYGWGWG 190
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G LE P A + ++ G HT LT G +Y G N FGQ+G+
Sbjct: 244 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGN 303
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P+++ ++VVQ+S G+ H+ A+T ++ WG+ +NGQLG+G+ +
Sbjct: 304 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 360
Query: 167 IPTKVECLS 175
P +E LS
Sbjct: 361 FPKIIEALS 369
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 174/349 (49%), Gaps = 23/349 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
+G G+ G+LG G E R P + A + +ACG HT + T +Y+ G DFG
Sbjct: 29 FGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFG 88
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ E+ QI+ G H A+T DGE+Y WG+N NGQLGLG
Sbjct: 89 RLG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDT 147
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++P K+ G+ K A G E + AVT GGK+ WG G G LG G +
Sbjct: 148 DDSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRM-- 203
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + K+ + A G+ H+ + ++G++Y +G ++ +
Sbjct: 204 -------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLL 256
Query: 281 PSLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P ++ L ++ V GG+ HT LT G+LY WG N+ G +G G +D SP+ + P
Sbjct: 257 PHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG 316
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
V QVSCGW+HT A+++ + +WG GT + GH G +DR
Sbjct: 317 QHQRVVQVSCGWRHTVAVTDKNNVYSWG----RGTSGQLGH--GDAVDR 359
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + ++ +ACG +H L +T G VY+ G N GQ
Sbjct: 82 WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P ++ + V ++ G H++A+T G+LY WG G LGLG +
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRG 200
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P +V + A G+ ++AV+ GK+ ++G G+LGHG + L
Sbjct: 201 DRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + L + + G+ H+ + E G++Y +G ++ + + P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
LIS + VV CG HT +T +Y+WG +G LG G +P+ +Q
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +VA+ G V S+G G G+LGHG + + PR+I L ++ + A
Sbjct: 13 GASHTVALLSGQVVCSFGRGEDGQLGHGD---------AEDRHLPRIIGALNDCEISLVA 63
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHT 300
G H+ R+ I+ D GN + P I L E ++ CG H
Sbjct: 64 CGADHTTAYSAT-RLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHC 122
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
+T+ GE+Y+WG N+NG LG+G D P ++ F V ++ G +HTAA+++ G
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLA-FEGVSVKMLAAGAEHTAAVTDGG 181
Query: 360 KILTWGWG 367
K+ WGWG
Sbjct: 182 KLYGWGWG 189
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P +A + ++ ++ G HT+ LTE G +Y G N FGQ+G S
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVG-SG 301
Query: 108 NIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
++ P + I G + VVQ+S G+ H+ A+T +Y WG+ ++GQLG G +
Sbjct: 302 DVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR-- 359
Query: 166 PIPTKVECLSGIFTKQAALGFEQS--VAVTGGGKVLSW 201
P ++ LS +A G E+S AVTG G V +W
Sbjct: 360 SAPKGIQALSA--DGKACEGLEKSPEPAVTGSG-VANW 394
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V G HT L SG + ++G E+G LG G + H P R+ G ++ + V+CG H
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLP-RIIGALNDCEISLVACGADH 68
Query: 353 TAAISEGK--ILTWGWGGSHGTFSEDGHSSGGQL 384
T A S + I +WGW G F GH + L
Sbjct: 69 TTAYSATRLTIYSWGW----GDFGRLGHGNSSDL 98
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 178/336 (52%), Gaps = 31/336 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ CG HTL +E+ VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFG 98
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + +P+R + GL+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHGNSSDLFIPQPIRALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 156
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 157 TEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND--- 211
Query: 220 FLRSTSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
R I E V K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 212 ----------RCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCK 261
Query: 277 HARRPSLISKLPYSEEVVC---GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
P + +S++++C GG+ HT LT+GG+LY WG N+ G +G+G SP
Sbjct: 262 DHLVPHKLQA--FSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPV 319
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+V+ P + V Q+SCGW+HT A++E + +WG G
Sbjct: 320 QVKFPHDQK-VAQISCGWRHTIAVTEKDNVYSWGRG 354
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 148/295 (50%), Gaps = 17/295 (5%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ GG+H++ L V + G + GQLG + L P ++S L +++V + G H
Sbjct: 20 ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDT-DDRLLPTQLSALDAQQIVSVVCGADH 78
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + E+Y WG G+LG G + IP P + L G+ KQ A G +AVT
Sbjct: 79 TLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQP--IRALQGLRIKQIACGDSHCLAVT 136
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ +GV +K+ AAG HS I
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQTFQGVPIKMVAAGAEHSVAI 187
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSEEVVCGGYHTCVLTSGGELYTW 312
ENG +Y +G + + N P +S V CG HT ++S GELYT+
Sbjct: 188 TENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTY 247
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
G ++ G LG G P ++Q FS+ + QVS GW+HT A++ G++ WGW
Sbjct: 248 GWSKYGQLGHGDCKDHLVPHKLQA-FSDKLICQVSGGWRHTMALTTGGQLYGWGW 301
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 148/298 (49%), Gaps = 20/298 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + ++ ++ G HS AIT +GELY WG G LGLG +
Sbjct: 152 LGLGTTED-SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ IP V+C + A G+ +++V+ G++ ++G G+LGHG L
Sbjct: 211 DRCIPEKVSVDCDKMVLV---ACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHL-VP 266
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ +LI ++ G G+ H+ + G++Y +G ++ G++ R
Sbjct: 267 HKLQAFSDKLICQVSG--------GWRHTMALTTGGQLYGWGWNKFGQVGV--GDNVDRC 316
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
S + K P+ ++V CG HT +T +Y+WG NG LGIG + P+ ++
Sbjct: 317 SPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIE 374
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 64/247 (25%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ V+ IS G HS A+ + WG+ +GQLG G +++P T++ L
Sbjct: 15 RRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLP--TQLSALDAQQIVSV 72
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + ++A + +V SWG G GRLGHG S + + P+ I+ L+G+++K
Sbjct: 73 VCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDL---------FIPQPIRALQGLRIK 123
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
++ CG H
Sbjct: 124 --------------------------------------------------QIACGDSHCL 133
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
+T GE+ +WG N+NG LG+G+ + P+++Q F P+ V+ G +H+ AI+E G+
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGE 192
Query: 361 ILTWGWG 367
+ WGWG
Sbjct: 193 LYGWGWG 199
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G R PV + ++CG HT+ +TE VY+ G GQ
Sbjct: 299 WGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQ 358
Query: 103 LGISENIGYS----LEPLRISG 120
LGI + I ++ +E L + G
Sbjct: 359 LGIGDTIDWNYPKIIEALSVDG 380
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 169/333 (50%), Gaps = 20/333 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 98 RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264
Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L S + GG+ HT LTS G+LY WG N+ G +G G SP +V P
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP 324
Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
E V QV+CGW+HT A +E K + WG G S
Sbjct: 325 -EEQKVAQVACGWRHTLAFTEKKNVFAWGRGTS 356
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 17/304 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K LACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P I + V I+ G H++A+T DG++Y WG G LGLG +
Sbjct: 151 LGLGTTED-SLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 210 DRF--VPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + G+ H+ + +G++Y +G ++ + P
Sbjct: 265 ------VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSP 318
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ ++ P + +V CG HT T ++ WG +G LG G I ++P +
Sbjct: 319 AQVN-FPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377
Query: 339 SESP 342
+ P
Sbjct: 378 PDGP 381
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 139/318 (43%), Gaps = 68/318 (21%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP------------------ 166
VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGA 75
Query: 167 ---------------------------------IPTKVECLSGIFTKQAALGFEQSVAVT 193
P V+ L GI KQ A G +AVT
Sbjct: 76 DHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+VLSWG +G+LG G E S+L P+ I+ EG+ VK+ AAG H+A
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
+ E+G +Y +G + + N P +S + + V+ CG HT ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG-- 367
T+G ++ G LG G + P +V+ +S Q+S GW+HT A+ S+GK+ WGW
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKF 304
Query: 368 GSHGTFSEDGHSSGGQLD 385
G G H S Q++
Sbjct: 305 GQVGAGDNADHCSPAQVN 322
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 173/334 (51%), Gaps = 22/334 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT + E VY+ G DFG
Sbjct: 45 WGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFG 104
Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+L G S ++ ++ +P+R + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 105 RLGHGNSSDV-FTPQPVRALQGIK--IKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLG 161
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P K++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 162 TTEDSL--LPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN--- 216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 217 ------DRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH 270
Query: 279 RRPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + L S + GG+ HT LTS G+LY WG N+ G +G G SP +V
Sbjct: 271 LFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMF 330
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
P +E V QV+CGW+HT A +E K + WG G S
Sbjct: 331 P-AEQKVAQVACGWRHTLAYTEKKNVFAWGRGTS 363
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 19/294 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 158 LGLGTTED-SLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 217 DRF--VPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + G+ H+ + +G++Y +G ++ G+
Sbjct: 272 ------FPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQV--GAGDSVDHC 323
Query: 282 SLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
S + + +E +V CG HT T ++ WG +G LG G I + P
Sbjct: 324 SPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKP 377
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 131/297 (44%), Gaps = 66/297 (22%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP------------------ 166
VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGA 82
Query: 167 ---------------------------------IPTKVECLSGIFTKQAALGFEQSVAVT 193
P V L GI KQ A G +AVT
Sbjct: 83 DHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVT 142
Query: 194 GGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
GG+V SWG +G+LG G E S+L P+ I+ EG+ VK+ AAG H+A
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGICVKMIAAGAEHTAA 192
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
+ E+G +Y +G + + N P +S + + V+ CG HT ++S G LY
Sbjct: 193 VTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILY 252
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
T+G ++ G LG G + P +V+ +S Q+S GW+HT A+ S+GK+ WGW
Sbjct: 253 TYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGW 308
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + GIC + I++ + A WG G YG LGLG R+ P S E
Sbjct: 171 KIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGE 230
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK QIS
Sbjct: 231 KMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH-LFPHKVEALKDSSTSQISG 289
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T DG+LY WG N GQ+G G P+ + Q A G+ ++
Sbjct: 290 GWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKV--AQVACGWRHTL 347
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
A T V +WG G SG+LGHG+
Sbjct: 348 AYTEKKNVFAWGRGTSGQLGHGE 370
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + S ++ G HT+ LT G +Y G N FGQ+G +
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ + + +++V Q++ G+ H+ A T ++ WG+ ++GQLG G+ + P+
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPL 378
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G +K+ E S AV KV
Sbjct: 379 MIDAISPDGSGSKK----LESSTAVPFTAKV 405
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 173/349 (49%), Gaps = 23/349 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
+G G+ G+LG G E R P + A + +ACG HT + T +Y+ G DFG
Sbjct: 29 FGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFG 88
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ E+ QI+ G H A+T DGE+Y WG+N NGQLGLG
Sbjct: 89 RLG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDT 147
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++P K+ G+ K A G E + AVT GK+ WG G G LG G +
Sbjct: 148 DDSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRM-- 203
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + K+ + A G+ H+ + ++G++Y +G ++ +
Sbjct: 204 -------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLL 256
Query: 281 PSLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P ++ L ++ V GG+ HT LT G+LY WG N+ G +G G +D SP+ + P
Sbjct: 257 PHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPG 316
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
V QVSCGW+HT A+++ + +WG GT + GH G +DR
Sbjct: 317 QHQRVVQVSCGWRHTVAVTDKNNVYSWG----RGTSGQLGH--GDAVDR 359
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + ++ +ACG +H L +T G VY+ G N GQ
Sbjct: 82 WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P ++ + V ++ G H++A+T G+LY WG G LGLG +
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRG 200
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P +V + A G+ ++AV+ GK+ ++G G+LGHG + L
Sbjct: 201 DRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + L + + G+ H+ + E G++Y +G ++ + + P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
LIS + VV CG HT +T +Y+WG +G LG G +P+ +Q
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +VA+ G V S+G G G+LGHG L PR+I L ++ + A
Sbjct: 13 GASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRL---------LPRIIGALNDCEISLVA 63
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHT 300
G H+ R+ I+ D GN + P I L E ++ CG H
Sbjct: 64 CGADHTTAYSAT-RLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHC 122
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
+T+ GE+Y+WG N+NG LG+G D P ++ F V ++ G +HTAA+++ G
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLA-FEGVSVKMLAAGAEHTAAVTDSG 181
Query: 360 KILTWGWG 367
K+ WGWG
Sbjct: 182 KLYGWGWG 189
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P +A + ++ ++ G HT+ LTE G +Y G N FGQ+G +
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD 302
Query: 108 NIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
+ S + + I G + VVQ+S G+ H+ A+T +Y WG+ ++GQLG G +
Sbjct: 303 VDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR--S 360
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
P ++ LS + L AVTG G V +W
Sbjct: 361 APKGIQALSADGSACEGLEKSPEPAVTGSG-VANW 394
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V G HT L SG + ++G E+G LG G + P R+ G ++ + V+CG H
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLP-RIIGALNDCEISLVACGADH 68
Query: 353 TAAISEGK--ILTWGWGGSHGTFSEDGHSSGGQL 384
T A S + I +WGW G F GH + L
Sbjct: 69 TTAYSATRLTIYSWGW----GDFGRLGHGNSSDL 98
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 24/346 (6%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++ L + WG G+ G+LG G E R P V ++F+ + ++ CG HT+ ++
Sbjct: 34 AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93
Query: 92 -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
+Y+ G DFG+LG N P I L+ ++ QI+ G H +T +G+++ WG+
Sbjct: 94 QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N NGQLGLG + +P K++ G+ K A G E + A+T GG + WG G G
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
LG P + +EG K+ + A G+ HS + +G +Y +G +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261
Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ FQ+ R+ + +P S+ + GG+ HT + G+LY WG N+ G +G+
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED- 318
Query: 326 DVLH-SPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
+V H SP V P E + QV+CGW+HT A++E K I +WG G S
Sbjct: 319 NVDHCSPVEVNFP-DEQKIVQVACGWRHTLALTENKNIFSWGRGAS 363
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 17/297 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V++ G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V+ I+ G H++AIT G+LY WG G LGL +
Sbjct: 158 LGLGNNQD-SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRD 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ SV+V+ G + ++G G+LGHG L
Sbjct: 217 DR--SVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR ++ L+ V + + G+ H+ + E+G++Y +G ++ ++ P
Sbjct: 272 ------VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSP 325
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
++ P +++V CG HT LT +++WG +G LG G I ++P+ +
Sbjct: 326 VEVN-FPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMID 381
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ V+ IS G +HS+A+ + WG+ +GQLG G + P+PT +
Sbjct: 20 EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDR--PVPTVLTSFDVPRVTS 77
Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G + ++A + ++ SWG G GRLGHG S + + P+ I L+G+K+
Sbjct: 78 VICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV---------FNPQPIVALQGMKI 128
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
K A G H + NG+V+ +G ++ + P I + + G
Sbjct: 129 KQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAE 188
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
HT +T GG+LY WG G LG+ D PE+V E V V+CGW+H+ ++ S
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMV-LVACGWRHSVSVSS 247
Query: 358 EGKILTWGWGG----SHGTFSE 375
G + T+GW HG F +
Sbjct: 248 SGALYTYGWSKYGQLGHGDFQD 269
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ + P AFE +K +A G HT +TE G +Y G +G
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+S+ S+ P ++S ++ E +V ++ G+ HS +++ G LY +G + GQLG G
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+E L + Q + G+ ++AV GK+ WG G+ +G
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +P + + K+ A G+ H+ + EN ++ +G A ++ E P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 282 SLISKL 287
+I L
Sbjct: 378 KMIDAL 383
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G + P A + + ++ G HT+ + E G +Y G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+ ++ ++++VQ++ G+ H+ A+T + ++ WG+ ++GQLG G+ + P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 167 IPTKVECLSGIFTKQ 181
L G KQ
Sbjct: 378 KMIDALSLDGSACKQ 392
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 173/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTET-GCVYATGLND 99
WG G+ G+LG G E R P V S F+ + + ++ CG HT +E VY+ G D
Sbjct: 46 WGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGD 105
Query: 100 FGQLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
FG+LG + ++ +P++ + G+K + QI+ G H A+T+ GE+ WG+N NGQLGL
Sbjct: 106 FGRLGHGNSSDVFTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGL 163
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + +P K++ G+ K A G E + AVT G + WG G G LG G +
Sbjct: 164 GTTEDSL--LPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDR 221
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 222 L---------VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFED 272
Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P + L S ++ G HT LTS G+LY WG N+ G +G+G D P +V+
Sbjct: 273 HLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVK 332
Query: 336 GPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
P + V QV+CGW+HT A +E K + +WG G S
Sbjct: 333 FP-EDQKVAQVACGWRHTLAFTEKKNVFSWGRGTS 366
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 144/304 (47%), Gaps = 17/304 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 160
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 161 LGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 219
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 220 DRL--VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 274
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + +G++Y +G ++ + + P
Sbjct: 275 ------VPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFP 328
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ K P + +V CG HT T +++WG +G LG G I + P +
Sbjct: 329 VQV-KFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387
Query: 339 SESP 342
+ P
Sbjct: 388 PDGP 391
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ S G+C + I++ + A WG G YG LGLG R P S+ E
Sbjct: 174 KIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGE 233
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK + QIS
Sbjct: 234 KMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSSISQISG 292
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T DG+LY WG N GQ+G+G P+ K + Q A G+ ++
Sbjct: 293 GWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKV--AQVACGWRHTL 350
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
A T V SWG G SG+LGHG+
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGE 373
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 121/268 (45%), Gaps = 36/268 (13%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV +S G HS A+ L WG+ +GQLG G +++P LSG +
Sbjct: 24 VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPT-----VLSGFDAAAPGI 78
Query: 185 -----GFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
G + + A + +V SWG G GRLGHG S + +TP+ +K L+G+
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDV---------FTPQPVKALQGI 129
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--- 295
K+K A G H + G V +G ++ G SL+ + S E VC
Sbjct: 130 KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQL----GLGTTEDSLLPQKIQSFEGVCVKM 185
Query: 296 ---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
G HT +T G+LY WG G LG+G + PE+V E V ++CGW+H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMV-LIACGWRH 244
Query: 353 TAAI-SEGKILTWGWGG----SHGTFSE 375
T + S G + T+GW HG F +
Sbjct: 245 TITVSSSGSLYTYGWSKYGQLGHGDFED 272
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 24/346 (6%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++ L + WG G+ G+LG G E R P V ++F+ + ++ CG HT+ ++
Sbjct: 34 AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93
Query: 92 -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
+Y+ G DFG+LG N P I L+ ++ QI+ G H +T +G+++ WG+
Sbjct: 94 QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N NGQLGLG + +P K++ G+ K A G E + A+T GG + WG G G
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
LG P + +EG K+ + A G+ HS + +G +Y +G +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261
Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ FQ+ R+ + +P S+ + GG+ HT + G+LY WG N+ G +G+
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED- 318
Query: 326 DVLH-SPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
+V H SP V P E + QV+CGW+HT A++E K I +WG G S
Sbjct: 319 NVDHCSPVEVNFP-DEQKIVQVACGWRHTLALTENKNIFSWGRGAS 363
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 17/297 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V++ G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V+ I+ G H++AIT G+LY WG G LGL +
Sbjct: 158 LGLGNNQD-SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRD 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ SV+V+ G + ++G G+LGHG L
Sbjct: 217 DR--SVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR ++ L+ V + + G+ H+ + E+G++Y +G ++ ++ P
Sbjct: 272 ------VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSP 325
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
++ P +++V CG HT LT +++WG +G LG G I ++P+ +
Sbjct: 326 VEVN-FPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMID 381
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ V+ IS G +HS+A+ + WG+ +GQLG G + P+PT +
Sbjct: 20 EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDR--PVPTVLTSFDVPRVTS 77
Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G + ++A + ++ SWG G GRLGHG S + + P+ I L+G+K+
Sbjct: 78 VICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV---------FNPQPIVALQGMKI 128
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
K A G H + NG+V+ +G ++ + P I + + G
Sbjct: 129 KQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAE 188
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
HT +T GG+LY WG G LG+ D PE+V E V V+CGW+H+ ++ S
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMV-LVACGWRHSVSVSS 247
Query: 358 EGKILTWGWGG----SHGTFSE 375
G + T+GW HG F +
Sbjct: 248 SGALYTYGWSKYGQLGHGDFQD 269
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ + P AFE +K +A G HT +TE G +Y G +G
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+S+ S+ P ++S ++ E +V ++ G+ HS +++ G LY +G + GQLG G
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+E L + Q + G+ ++AV GK+ WG G+ +G
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +P + + K+ A G+ H+ + EN ++ +G A ++ E P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 282 SLISKL 287
+I L
Sbjct: 378 KMIDAL 383
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G + P A + + ++ G HT+ + E G +Y G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+ ++ ++++VQ++ G+ H+ A+T + ++ WG+ ++GQLG G+ + P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 167 IPTKVECLSGIFTKQ 181
L G KQ
Sbjct: 378 KMIDALSLDGSACKQ 392
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 182/351 (51%), Gaps = 28/351 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 37 WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 97 RLG-HGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTS 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 156 EDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN----- 208
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNH 277
+ P + ++ K+ + A G+ H+ + G +Y +G ++ F++
Sbjct: 209 ----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 278 ARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
++ +S S+ V GG+ H+ LTS G LY WG N+ G +G+G SP +V+
Sbjct: 265 PQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF 322
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLDR 386
P + V Q+SCGW+HT A++E + + +WG GT + GH G +DR
Sbjct: 323 PHDQKVV-QISCGWRHTIAVTEKENVFSWG----RGTNGQLGH--GDTVDR 366
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 18/296 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P +S L +++ I+ G H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 77 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G S P+ I+ +GV +K+ AAG HS I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
ENG +Y +G + + N P +S + + V+ CG HT ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
+G ++ G LG G+ + P+++Q S+ + QVS GW+H+ A+ S G + WGW
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGW 300
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 162/332 (48%), Gaps = 34/332 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 90 WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ SE+ SL P +I + ++ ++ G HS AIT +GELY WG G LGLG
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
+ + IP KV + A G+ +++V+ G + ++G G+LGHG E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ ++ L + + G+ HS + G +Y +G ++ G++
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312
Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
R S + K P+ ++VV CG HT +T +++WG NG LG G +SP+ +
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372
Query: 335 Q--------GPFSESPVDQVSCGWKHTAAISE 358
+ GP ES + G K A++SE
Sbjct: 373 EALSVDGSSGPHIESSNTDLLSG-KSGASLSE 403
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +VA+ G V SWG G G+LGHG L P + L+ ++ A
Sbjct: 21 GASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRL---------LPTHLSALDAQQIDSIA 71
Query: 245 AGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
G H+ E+ +Y +G ++ + P I L +++ CG H
Sbjct: 72 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCL 131
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
+T GE+ +WG N+NG LG+G+ + P+++Q F P+ V+ G +H+ AI+E G+
Sbjct: 132 AVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGE 190
Query: 361 ILTWGWG 367
+ WGWG
Sbjct: 191 LYGWGWG 197
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ G HT L SG + +WG E+G LG G D P + +D ++CG H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSA-LDAQQIDSIACGADH 76
Query: 353 TAAISEGK--ILTWGWGGSHGTFSEDGHSSGGQL 384
T A SE + + +WGW G F GH + L
Sbjct: 77 TLAYSESRNELYSWGW----GDFGRLGHGNSSDL 106
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 182/351 (51%), Gaps = 28/351 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 37 WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 97 RLG-HGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTS 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 156 EDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN----- 208
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNH 277
+ P + ++ K+ + A G+ H+ + G +Y +G ++ F++
Sbjct: 209 ----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 278 ARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
++ +S S+ V GG+ H+ LTS G LY WG N+ G +G+G SP +V+
Sbjct: 265 PQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF 322
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLDR 386
P + V Q+SCGW+HT A++E + + +WG GT + GH G +DR
Sbjct: 323 PHDQKVV-QISCGWRHTIAVTEKENVFSWG----RGTNGQLGH--GDTVDR 366
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 150/296 (50%), Gaps = 18/296 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P +S L +++ I+ G H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 77 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G S P+ I+ +GV +K+ AAG HS I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
ENG +Y +G + + N P +S + + V+ CG HT ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
+G ++ G LG G+ + P+++Q S+ + QVS GW+H+ A+ S G + WGW
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGW 300
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 25/301 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 90 WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ SE+ SL P +I + ++ ++ G HS AIT +GELY WG G LGLG
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
+ + IP KV + A G+ +++V+ G + ++G G+LGHG E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ ++ L + + G+ HS + G +Y +G ++ G++
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312
Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
R S + K P+ ++VV CG HT +T +++WG NG LG G +SP+ +
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372
Query: 335 Q 335
+
Sbjct: 373 E 373
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +VA+ G V SWG G G+LGHG L P + L+ ++ A
Sbjct: 21 GASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRL---------LPTHLSALDAQQIDSIA 71
Query: 245 AGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
G H+ E+ +Y +G ++ + P I L +++ CG H
Sbjct: 72 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCL 131
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
+T GE+ +WG N+NG LG+G+ + P+++Q F P+ V+ G +H+ AI+E G+
Sbjct: 132 AVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGE 190
Query: 361 ILTWGWG 367
+ WGWG
Sbjct: 191 LYGWGWG 197
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ G HT L SG + +WG E+G LG G D P + +D ++CG H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSA-LDAQQIDSIACGADH 76
Query: 353 TAAISEGK--ILTWGWGGSHGTFSEDGHSSGGQL 384
T A SE + + +WGW G F GH + L
Sbjct: 77 TLAYSESRNELYSWGW----GDFGRLGHGNSSDL 106
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 175/349 (50%), Gaps = 36/349 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT +E+ VY+ G + F
Sbjct: 40 WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGCDLFT 99
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
I +L LRI QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 100 PQPIK-----ALHGLRIK-------QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE 147
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 148 DSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL--- 202
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + +EGVK+ A G+ H+ + +G +Y +G ++ + P
Sbjct: 203 ------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTP 256
Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPF 338
+ L + E+ G HT LTS G+LY WG N+ G +G+G +V H SP +V+ P
Sbjct: 257 HKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPH 315
Query: 339 SESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLDR 386
E V +SCGW+HT A++E + + +WG GT + GH G +DR
Sbjct: 316 -EQKVVHISCGWRHTLAVTERQNVFSWG----RGTNGQLGH--GESIDR 357
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 52/291 (17%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP----------- 166
+S + V+ IS G HS A+ + WG+ +GQLG G ++ P
Sbjct: 11 VSAPVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEV 70
Query: 167 ----------------------------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
P ++ L G+ KQ A G +AVT G+V
Sbjct: 71 VSVTCGADHTTAYSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEV 130
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG +G+LG G L P+ I+ +GV VK+ AAG H+A + E+G
Sbjct: 131 QSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGE 181
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
+Y +G + + N P +S + + +V CG HT ++S G LYT+G ++
Sbjct: 182 LYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSK 241
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
G LG G + +P +++ E+ + ++S GW+HT A+ S+GK+ WGW
Sbjct: 242 YGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGKLYGWGW 291
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A +++ + ++ G HT+ LT G +Y G N FGQ+G+ +
Sbjct: 242 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 301
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+++ +++VV IS G+ H+ A+T ++ WG+ +NGQLG G+ +
Sbjct: 302 NVDH-CSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDR--N 358
Query: 167 IPTKVECLS 175
IP +E LS
Sbjct: 359 IPKMIEVLS 367
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 26/187 (13%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SVA+ G V SWG G G+LGHG L +P + L+G +V
Sbjct: 24 GASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRL---------SPTYLSALDGHEVVSVT 74
Query: 245 AGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
G H+ E+ +VY +G LF P I L +++ CG H
Sbjct: 75 CGADHTTAYSESFTQVYSWGCD-----LFT-------PQPIKALHGLRIKQIACGDSHCL 122
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
+T GE+ +WG N+NG LG+G+ + P+++Q F V V+ G +HTAA++E G+
Sbjct: 123 AVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQA-FQGVSVKMVAAGAEHTAAVTEDGE 181
Query: 361 ILTWGWG 367
+ WGWG
Sbjct: 182 LYGWGWG 188
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 183/351 (52%), Gaps = 28/351 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 38 WGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 98 RLG-HGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNT 156
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 157 EDSL--VPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN----- 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNH 277
+ P + ++ K+ + A G+ H+ + +G +Y +G ++ F++
Sbjct: 210 ----DRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLV 265
Query: 278 ARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
++ +S S+ V GG+ H+ LTS G L+ WG N+ G +G+G SP +V+
Sbjct: 266 PQKLQALSDKLISQ--VSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKF 323
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLDR 386
P + V Q+SCGW+HT A++E + + +WG GT + GH G +DR
Sbjct: 324 PQDQRVV-QISCGWRHTIAVTEKENVFSWG----RGTNGQLGH--GDTIDR 367
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 150/296 (50%), Gaps = 18/296 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
++ G +HT+ L V + G + GQLG + L P ++S L + + I+ G H
Sbjct: 19 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL-PTQLSALDAQHIDSIACGADH 77
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 78 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ +GV +K+ AAG HS I
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFKGVPIKMVAAGAEHSVAI 186
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
ENG +Y +G + + N P +S + + V+ CG HT ++S G +YT
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
+G ++ G LG G+ + P+++Q S+ + QVS GW+H+ A+ S G + WGW
Sbjct: 247 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLFGWGW 301
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 142/298 (47%), Gaps = 19/298 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I K ++ ++ G HS AIT +GELY WG G LGLG +
Sbjct: 151 LGLG-NTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF 220
+ P KV + A G+ +++V+ G + ++G G+LGHG E S++
Sbjct: 210 DRW--NPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLV-- 265
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ ++ L + + G+ HS + G ++ +G ++ +
Sbjct: 266 --------PQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS 317
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P + K P + VV CG HT +T +++WG NG LG G +SP+ ++
Sbjct: 318 PVQV-KFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIE 374
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +VA+ G V SWG G G+LGHG + P + L+ + A
Sbjct: 22 GASHTVALLSGNVVCSWGRGEDGQLGHGD---------TDDRPLPTQLSALDAQHIDSIA 72
Query: 245 AGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
G H+ E+ +Y +G ++ + P I L +++ CG H
Sbjct: 73 CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCL 132
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
+T GE+ +WG N+NG LG+G+ + P+++Q F P+ V+ G +H+ AI+E G+
Sbjct: 133 AVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQA-FKGVPIKMVAAGAEHSVAITENGE 191
Query: 361 ILTWGWG 367
+ WGWG
Sbjct: 192 LYGWGWG 198
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ G HT L SG + +WG E+G LG G D P ++ +D ++CG H
Sbjct: 19 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSA-LDAQHIDSIACGADH 77
Query: 353 TAAISEGK--ILTWGWGGSHGTFSEDGHSSGGQL 384
T A SE + + +WGW G F GH + L
Sbjct: 78 TLAYSESRNELYSWGW----GDFGRLGHGNSSDL 107
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 176/350 (50%), Gaps = 24/350 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P S + + ++ CG HT +E+ VY+ G DFG
Sbjct: 42 WGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFG 101
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L ++ QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 102 RLG-HGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTT 160
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 161 EDSLVP--QKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL-- 216
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 217 -------VPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLT 269
Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L S ++ GG+ HT LTS G LY WG N+ G +G+G SP +V+ P
Sbjct: 270 PHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPH 329
Query: 339 SES-PVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLDR 386
++ + Q+SCGW+HT AI+E + + +WG GT + GH G +DR
Sbjct: 330 EQAHSLVQISCGWRHTLAITERQNVFSWG----RGTNGQLGH--GESMDR 373
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 124/267 (46%), Gaps = 20/267 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+SG ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 12 EVSGPIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGD--AEDRPTPTQLSTLDG 69
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
+ G + + + + +V SWG G GRLGHG S + +TP+ IK L
Sbjct: 70 LDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDL---------FTPQPIKAL 120
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
+K++ A G H + +G V +G ++ + P I + V
Sbjct: 121 HSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMV 180
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
G HT +T GELY WG G LG+G + PE+V + + V+CGW+HT
Sbjct: 181 AAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMI-MVACGWRHT 239
Query: 354 AAI-SEGKILTWGWGG----SHGTFSE 375
++ S G + T+GW HG F +
Sbjct: 240 ISVSSSGGLYTYGWSKYGQLGHGDFED 266
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 61/245 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AF+ S+K +A G HT +TE G +Y G +G
Sbjct: 147 WGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGN 206
Query: 103 LGISE--------------------------------------NIGYS------------ 112
LG+ + G+S
Sbjct: 207 LGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFED 266
Query: 113 -LEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
L P ++ L+ + IS G+ H+ A+T DG LY WG N GQ+G+G P+ K
Sbjct: 267 HLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVK 326
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
Q + G+ ++A+T V SWG G +G+LGHG+ S P+
Sbjct: 327 FPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGE---------SMDRNLPK 377
Query: 231 LIKEL 235
+I+ L
Sbjct: 378 IIEVL 382
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 173/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F + + CG HT+FL + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P + L ++ V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKP---RKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++CLS + Q A G+ S A++ GG+V SWG G+LG G S +
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP++I+ L+G+ +AG HS I +G V+ +G ++ + N
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRW 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+ V+ CG HT LT G ++T+G+ G LG S + +P +V
Sbjct: 232 FPALLKSL-RSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ V Q+SCG +HT A S GK+ ++G GG+
Sbjct: 290 ELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S P + + + L+ GGAH+ +T +G V+ G N FG
Sbjct: 161 WGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S + V+ +S G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
++ P KV L G Q + G + ++A T GK+ S+G GG+G+LG
Sbjct: 281 HEI--NPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 162/320 (50%), Gaps = 19/320 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 98 RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264
Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L S + GG+ HT LTS G+LY WG N+ G +G G SP +V P
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP 324
Query: 338 FSESPVDQVSCGWKHTAAIS 357
E V QV+CGW+HT A +
Sbjct: 325 -EEQKVAQVACGWRHTLAFT 343
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 157/318 (49%), Gaps = 22/318 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++ G +H++ L + G + GQLG + L P ISG + + G H
Sbjct: 19 VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAED-RLVPTVISGFDAPGITSVICGADH 77
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
++A + D ++Y WG G+LG G P P V+ L GI KQ A G +AVT
Sbjct: 78 TTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQP--VKALQGIKIKQLACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+VLSWG +G+LG G E S+L P+ I+ EG+ VK+ AAG H+A
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
+ E+G +Y +G + + N P +S + + V+ CG HT ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG-- 367
T+G ++ G LG G + P +V+ +S Q+S GW+HT A+ S+GK+ WGW
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKF 304
Query: 368 GSHGTFSEDGHSSGGQLD 385
G G H S Q++
Sbjct: 305 GQVGAGDNADHCSPAQVN 322
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 178/361 (49%), Gaps = 48/361 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT + VY+ G DFG
Sbjct: 32 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFG 91
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L ++ QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 92 RLG-HGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTT 150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G++ WG G G LG G + L
Sbjct: 151 EDSL--VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRL-- 206
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
P+ + ++G K+ + A G+ H+ + G +Y +G DR V
Sbjct: 207 -------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLV 259
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSID 326
L A R IS+ + GG+ HT LT+ G+LY WG N+ G +G G
Sbjct: 260 PHRL-----EALRGDNISQ-------ISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 307
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLD 385
SP +++ P + V Q+SCGW+HT A+++ + + +WG GT + GH G +D
Sbjct: 308 DHCSPIQIKFP-QDQKVIQISCGWRHTLAVTDKQNVFSWG----RGTNGQLGH--GESVD 360
Query: 386 R 386
R
Sbjct: 361 R 361
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 20/261 (7%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ V+ IS G HS A+ + WG+ +GQLG G ++ PT++ L G
Sbjct: 8 RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDGHEIVSV 65
Query: 183 ALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + + A + +V SWG G GRLGHG S +L TP+ IK L G+K++
Sbjct: 66 TCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLL---------TPKPIKALHGLKIR 116
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
A G H + G V +G ++ + P I + V G H
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEH 176
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
T +T GEL+ WG G LG+G + P++V + V V+CGW+HT ++S
Sbjct: 177 TAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMV-MVACGWRHTISVSSL 235
Query: 359 GKILTWGWGG----SHGTFSE 375
G + T+GW HG F +
Sbjct: 236 GGLYTYGWSKYGQLGHGDFED 256
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E R P A ++ ++ G HT+ LT G +Y G N FGQ+G +
Sbjct: 246 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 305
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
NI + P++I ++V+QIS G+ H+ A+T ++ WG+ +NGQLG G+ + P
Sbjct: 306 NIDH-CSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTP 364
Query: 167 IPTKVECLSGIFTKQ 181
+ + + G +Q
Sbjct: 365 MILEALSVDGCSGQQ 379
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 171/333 (51%), Gaps = 23/333 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + P S ++++ CG +T+ + + G VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFG 96
Query: 102 QLGISE-NIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + N + P+ SG + V +++ G H+ + +GEL+ +G+N NGQLGLG
Sbjct: 97 RLGHGDCNDVFVPRPIEFFSG--RPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGH 154
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V L G + A G E S+A T G V SWG G G LG G+
Sbjct: 155 TNDCLSP--QLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGE------ 206
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S Y P + LEG+++ A G+ HSA + E+GRV+ FG ++ G+H
Sbjct: 207 ---SQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQL--GHGDHTD 261
Query: 280 R--PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R P ++ L ++ V GG+ HT S G LY WG N+ G LG+G SP V
Sbjct: 262 RTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVG 321
Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
G + V V+CGW+HT A++E G++ +WG G
Sbjct: 322 GALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRG 354
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 131/286 (45%), Gaps = 16/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P F + +ACG HTL + G ++ G N GQ
Sbjct: 90 WGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P + L+ E V+ ++ G HS A T G ++ WG G LG G+
Sbjct: 150 LGLG-HTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQ 208
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +PT+V L GI A G+ S V+ G+V ++G G+LGHG
Sbjct: 209 DRY--LPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDH------- 259
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T P + L ++ A G+ H+ D +G +Y +G ++ + + P
Sbjct: 260 --TDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSP 317
Query: 282 SLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L+ + V CG HT +T GG +Y+WG NG LG G+
Sbjct: 318 VLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGA 363
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 113/254 (44%), Gaps = 16/254 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R S + V +S G HS AI G + WG+ +GQLG G+ A P + L+
Sbjct: 7 RSSEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQ--ADECLAPKAISTLTD 64
Query: 177 IFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
+ G E ++AV G+V SWG G GRLGHG + + + PR I+
Sbjct: 65 AGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDV---------FVPRPIEFF 115
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEV 293
G V A G H+ + G ++ FG ++ N P L+ L V
Sbjct: 116 SGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV 175
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ T G +++WG G LG G + P RV G + CGW+H+
Sbjct: 176 ACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGWRHS 234
Query: 354 AAISE-GKILTWGW 366
A +SE G++ T+GW
Sbjct: 235 AVVSEDGRVFTFGW 248
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 5/177 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG G + R+ P E + + CG H+ ++E G V+ G + +GQ
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQ 253
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ ++ P +++ L+ + ++ G+ H+ A G LY WG N GQLGLG +
Sbjct: 254 LGHGDHTDRTV-PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSS 312
Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P P V L+G G+ +VAVT GG+V SWG G +G+LGHG E +
Sbjct: 313 DR--PSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G SVA+ G V SWG G G+LGHGQ L P+ I L ++
Sbjct: 19 SCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL---------APKAISTLTDAGIES 69
Query: 243 AAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVVCGGY 298
G ++ A G+VY +G ++ + N P I S P V CG
Sbjct: 70 VVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPV-HRVACGDT 128
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT V+ GEL+T+G N+NG LG+G + SP+ V E V V+CG +H+ A +E
Sbjct: 129 HTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGER-VRSVACGSEHSLAATE 187
Query: 359 -GKILTWGWG 367
G + +WGWG
Sbjct: 188 SGTVFSWGWG 197
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
P V CG H+ + S G + +WG E+G LG G D +P+ + +++ ++ V
Sbjct: 13 PGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAIS-TLTDAGIESVV 71
Query: 348 CGWKHTAAI--SEGKILTWGWG 367
CG ++T A+ S G++ +WGWG
Sbjct: 72 CGAEYTIAVAPSRGQVYSWGWG 93
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 171/331 (51%), Gaps = 20/331 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G + R P + S E + ++ CG HT+ +E+ VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P+R + GLK + QI+ G H A+T++G++ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDLFTPQPIRQLHGLK--IKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E + AVT G++ WG G G LG G L
Sbjct: 156 TEDSL--VPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRL- 212
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 213 --------VPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHL 264
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L + ++ G HT +TS G+LY WG N+ G +G+G SP +V+ P
Sbjct: 265 IPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLP 324
Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWGWG 367
E V +SCGW+HT A++E + + +WG G
Sbjct: 325 L-EQKVILISCGWRHTLAVTERQNVFSWGRG 354
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 145/294 (49%), Gaps = 19/294 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + ++ ++ G H++A+T DGELY WG G LGLG +
Sbjct: 151 LGLGTTED-SLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRK 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV G A G+ +++V+ G + ++G G+LGHG + L
Sbjct: 210 DRL--VPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+G + + G+ H+ + +G++Y +G ++ G++ R
Sbjct: 265 ------IPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV--GDNVDRS 316
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
S + KLP ++V+ CG HT +T +++WG NG LG G + P
Sbjct: 317 SPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVP 370
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 18/249 (7%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ V+ IS G HS A+ + WG+ +GQLG G ++ P T + L G+
Sbjct: 14 RRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSP--TILSTLEGLEIISV 71
Query: 183 ALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + ++A + V SWG G GRLGHG S + +TP+ I++L G+K+K
Sbjct: 72 ICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDL---------FTPQPIRQLHGLKIK 122
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGY 298
A G H + G+V +G ++ + P I +P + V G
Sbjct: 123 QIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPI-KMVAAGAE 181
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
HT +T GELY WG G LG+G PE+V P E V V+CGW+HT ++ S
Sbjct: 182 HTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMV-MVACGWRHTISVSS 240
Query: 358 EGKILTWGW 366
G + T+GW
Sbjct: 241 SGGLYTYGW 249
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P A + + ++ G HT+ +T G +Y G N FGQ+G+ +
Sbjct: 252 YGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGD 311
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ S P+++ L+++V+ IS G+ H+ A+T ++ WG+ +NGQLG G+ + +P
Sbjct: 312 NVDRS-SPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVP 370
Query: 167 IPTKVECLSG 176
+ K + G
Sbjct: 371 VIIKALSVDG 380
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 172/322 (53%), Gaps = 17/322 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG ++ P + SA S+K + CG HT +++TG ++ G +G+
Sbjct: 63 WGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122
Query: 103 LGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +G+ P R+ + +EV QI+ G H++A+ GE+Y WG NG G+G +A
Sbjct: 123 LGHGNEVGHP-APCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIG-EA 180
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ +P K+E L G+ T+ AA GF + A+T G + SWG G GRLG G E
Sbjct: 181 AEHQYLPKKLEALKGVKITQIAACGF-HTAAITQDGALWSWGEGKFGRLGQGNEK----- 234
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++ TP ++ L+GV+VK A G HSAC+ E+G V FG ++ + +
Sbjct: 235 ----NQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTV 290
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P L+ L + +V CG HT L+ G+++T+G+ ++G LG G+ P+ V+
Sbjct: 291 PCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVE-SL 349
Query: 339 SESPVDQVSCGWKHTAAISEGK 360
+ V +V+ +HT A+ +
Sbjct: 350 ANMKVAKVASYNEHTVALCHAE 371
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 178/338 (52%), Gaps = 23/338 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+ G GS + P+ + ++ +ACG HT+ LTE V++ G D G+
Sbjct: 11 WGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGR 70
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++N + P +S L K + Q++ G +H++AI+ G L+ WG G+LG G +
Sbjct: 71 LGHADN-HWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEV 129
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P +VE G +Q A G + A+ GG+V WG +G G G+ +
Sbjct: 130 GH--PAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAE----- 182
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y P+ ++ L+GVK+ +IAA GF H+A I ++G ++ +G+ ++ +GN +
Sbjct: 183 ---HQYLPKKLEALKGVKITQIAACGF-HTAAITQDGALWSWGEGKFGRL--GQGNEKNQ 236
Query: 281 --PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + L ++V CGG+H+ +T G++ T+G E+G LG G P V+
Sbjct: 237 VTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKA 296
Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
+ + QV+CGW HT +SE GK+ T+G G HG
Sbjct: 297 -LEGAGIVQVTCGWSHTVTLSEDGKVFTFG-NGDHGKL 332
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 26/256 (10%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
D LY WG+ +GQ G G + +P+P VE L + Q A G +V +T V S
Sbjct: 5 DSMLYSWGRGEDGQCGNGSTNDQEMPMP--VEGLKHLTVVQIACGSGHTVVLTEDKDVWS 62
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLGH + +Y P L+ L G +K G H+A I + G ++
Sbjct: 63 WGRGDDGRLGHAD---------NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALW 113
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
+G K+ GN P+ + E++ CG HT L +GGE+Y WG E
Sbjct: 114 TWGGGMYGKL--GHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRE 171
Query: 317 NGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
NG GIG + + + P++++ +CG+ HTAAI++ L W WG G F
Sbjct: 172 NGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGF-HTAAITQDGAL-WSWG--EGKFGR 227
Query: 376 DGHSSGGQLDRGQLTP 391
G + ++ Q+TP
Sbjct: 228 LGQGN----EKNQVTP 239
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 177/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG + E P C FE ++ + CG HT+FL E G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P ++ L + +V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKA---RKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P V+ LS + Q A G+ S+A+ GG++ SWG G+LG GQ+ + +
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVC 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+P++I+ L+G+ +AG HS + +G ++ +G ++ + + R
Sbjct: 180 --------SPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRR 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P L+ L S++VV CG HT LT G ++T+G+ G LG S + +P +V
Sbjct: 232 FPVLLKTL-RSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT A S GKI ++G GG+
Sbjct: 290 ELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGN 324
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 5/187 (2%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTL 84
C W S L R WG YG+LGLG P V + + ++ GGAH+
Sbjct: 144 CGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSF 203
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
LT +G ++ G N FGQLG+ +N L + ++VV I G H++A+T +G +
Sbjct: 204 GLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGV 263
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGA 203
+ +G GQLG +V P KV L G Q A G + ++A + GK+ S+G
Sbjct: 264 FTFGAGGYGQLGHNSTNHEVNP--RKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGL 321
Query: 204 GGSGRLG 210
GG+G+LG
Sbjct: 322 GGNGQLG 328
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG + R PV+ + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L VV QI+ G H+ A I G++ +G NGQLG
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRST 332
Query: 161 AAKVIPIPTK 170
++ P P K
Sbjct: 333 CNRISPTPVK 342
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR + EG +V+ G H+ + E+G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G+++ WG
Sbjct: 54 TVYTCGCNDLGQLGHEKAR--KKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLG 111
Query: 316 ENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+G LG+ + D L P V+ SE + QV+CG+ H+ A++ G+I +WG
Sbjct: 112 SDGQLGLSIVEDCLRVPRTVKS-LSEVHITQVACGYWHSLALARGGEIFSWG 162
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 177/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+S S P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+S+ P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR KV+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G++Y WG +
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ ++ + Q++CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEEYIKVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWG 162
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 177/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+S S P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+S+ P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR KV+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G++Y WG +
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ ++ + Q++CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEEYIKVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWG 162
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 170/335 (50%), Gaps = 25/335 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SA + + + CG HT+ +E+G VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ L P I L+ ++ QI+ G H A+T+D ++ WG+N NG+LGLG
Sbjct: 98 RLGHGDHSDL-LIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTA 156
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ I K A G E SVA+T G + WG G G LG G +
Sbjct: 157 EDSL--LPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRND---- 210
Query: 221 LRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
RL+ E ++G K+ + A G+ H+ C+ +G +Y G ++ +
Sbjct: 211 ---------RLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFED 261
Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P + L + +V G H+ LTS G+L WG N+ G +G+G+ SP +V
Sbjct: 262 HLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVN 321
Query: 336 GPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
P + V +SCGW+HT A++E + + +WG G +
Sbjct: 322 FPHDQK-VQMISCGWRHTIAVTERENVYSWGRGAN 355
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 18/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G P A + ++ +ACG +H L +T V + G N G+
Sbjct: 91 WGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGE 150
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I ++ + ++ G HS AIT DG LY WG G LGLG +
Sbjct: 151 LGLG-TAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P V+ G A G+ ++ V+ G + + G G G+LGHG L
Sbjct: 210 DRLLPEKVTVD---GDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHL--- 263
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR ++ L + + G+ HS + +G++ +G ++ P
Sbjct: 264 ------VPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSP 317
Query: 282 SLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P+ ++V CG HT +T +Y+WG NG LG G
Sbjct: 318 MQVN-FPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNG 361
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 23/268 (8%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ + V+ +S G HS A+ + WG+ +GQLG G ++ PTK+ L G
Sbjct: 8 EVAAPPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRL--FPTKLSALDG 65
Query: 177 IFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + ++A + G+ V SWG G GRLGHG S +L P IK L
Sbjct: 66 QDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLL---------IPHPIKAL 116
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEE 292
+G+ ++ A G H + + +V +G ++ + P I ++P +
Sbjct: 117 QGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPI-KM 175
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V G H+ +T G LY WG G LG+G + PE+V + V+CGW+H
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVT--VDGDKMAMVACGWRH 233
Query: 353 TAAI-SEGKILTWGWGG----SHGTFSE 375
T + S G + T GWG HG F +
Sbjct: 234 TICVSSSGGLYTNGWGKYGQLGHGDFED 261
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 164/336 (48%), Gaps = 22/336 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 44 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG ++P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 163 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
L P + + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P + L + ++ G HT L + G+LY WG N+ G +G+G + SP +V
Sbjct: 272 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 331
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
P +E V QV+CGW+HT A++E K + +WG G S
Sbjct: 332 NFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS 366
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 17/302 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + + +ACG +H L +T G V++ G N GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 160
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 161 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 219
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ IP KV ++G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 220 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 274
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + +G++Y +G ++ + P
Sbjct: 275 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 328
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
++ P ++VV CG HT LT +++WG +G LG G I + P+ +
Sbjct: 329 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 387
Query: 339 SE 340
S+
Sbjct: 388 SD 389
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 66/322 (20%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ VV IS G HS A+ G + WG+ +GQLG G A+ P+PT L+ F
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD--AEDRPVPT---VLTAAFDD- 72
Query: 182 AALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSI-------------- 217
A G SV + G ++ SWG G GRLGHG S +
Sbjct: 73 -APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRI 131
Query: 218 -----------------------------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
LG + P+ I+ EGV+VK+ AAG
Sbjct: 132 TQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 191
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSG 306
H+A + E+G +Y +G + + + P +S + + V+ CG HT ++S
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSS 251
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G +YT+G ++ G LG G + P +++ ++ + Q+S GW+HT A+ ++GK+ WG
Sbjct: 252 GSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGKLYGWG 310
Query: 366 WG--GSHGTFSEDGHSSGGQLD 385
W G G + H S Q++
Sbjct: 311 WNKFGQVGVGDNEDHCSPVQVN 332
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 164/336 (48%), Gaps = 22/336 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 49 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 108
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 109 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 167
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG ++P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 168 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 225
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
L P + + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 226 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P + L + ++ G HT L + G+LY WG N+ G +G+G + SP +V
Sbjct: 277 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 336
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
P +E V QV+CGW+HT A++E K + +WG G S
Sbjct: 337 NFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS 371
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 17/302 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + + +ACG +H L +T G V++ G N GQ
Sbjct: 106 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 166 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 224
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ IP KV ++G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 225 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + +G++Y +G ++ + P
Sbjct: 280 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 333
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
++ P ++VV CG HT LT +++WG +G LG G I + P+ +
Sbjct: 334 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 392
Query: 339 SE 340
S+
Sbjct: 393 SD 394
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 66/322 (20%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ VV IS G HS A+ G + WG+ +GQLG G A+ P+PT L+ F
Sbjct: 24 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD--AEDRPVPT---VLTAAFDD- 77
Query: 182 AALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSI-------------- 217
A G SV + G ++ SWG G GRLGHG S +
Sbjct: 78 -APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRI 136
Query: 218 -----------------------------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
LG + P+ I+ EGV+VK+ AAG
Sbjct: 137 TQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAE 196
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSG 306
H+A + E+G +Y +G + + + P +S + + V+ CG HT ++S
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSS 256
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G +YT+G ++ G LG G + P +++ ++ + Q+S GW+HT A+ ++GK+ WG
Sbjct: 257 GSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGKLYGWG 315
Query: 366 WG--GSHGTFSEDGHSSGGQLD 385
W G G + H S Q++
Sbjct: 316 WNKFGQVGVGDNEDHCSPVQVN 337
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 73 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 182 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 240
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 241 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 298
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V QV+CG +HT+A S G+I ++G GG+
Sbjct: 299 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 333
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 68 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 126 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 185
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 186 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 238 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 295
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S +V CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 296 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 352
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 229
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 230 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 290 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 343
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 177/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR KV+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G++Y WG +
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ ++ + Q++CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWG 162
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V SWG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCN 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L+GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 177/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR KV+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G++Y WG +
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ ++ + Q++CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWG 162
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 177/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR KV+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G++Y WG +
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLD 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ ++ + Q++CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWG 162
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 173/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P CS F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ A+ G++Y WG +GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P++IK L G+ AAG HS + +G V+ +G ++ + N
Sbjct: 177 -----KQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ ++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y+ P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G V WG G+LG E+
Sbjct: 177 KQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L ++ CG HT + S G +Y++G NG LG+G+ SP V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKG 343
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG A
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSN 334
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR KV+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ +RP + L V CG HT L G++Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFA 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + P ++ S+ + QV+CG+ H+ A+S+G ++ +WG
Sbjct: 112 VDGQLGLSGTEEYTRVPRNIKS-LSDIQIVQVACGYFHSLALSKGSEVFSWG 162
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 165/344 (47%), Gaps = 29/344 (8%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
A WG G+ G+LG G + P +A + A+ CG +T+ + + G +Y+ G D
Sbjct: 32 ASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGD 91
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGL 157
FG+LG E G P I+ + V +++ G H+ +T DG LY +G+N NGQLGL
Sbjct: 92 FGRLGHGE-CGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGL 150
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P V L G A G E S+A T G V SWG G G LG G
Sbjct: 151 GHTNDCLSP--QLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGD---- 204
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S YTP + L+GV V G+ HSA + + GRV+ FG ++ +
Sbjct: 205 -----SQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD 259
Query: 278 ARRPSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP L++ L + V GG+ HT S G LY WG N+ G LG+G + +P V
Sbjct: 260 HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVA 319
Query: 336 G-----------PFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
G + V ++CGW+HT A++E G++ +WG G
Sbjct: 320 GFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRG 363
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 131/298 (43%), Gaps = 28/298 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG GD+GRLG G + P + F + +ACG HTL +T+ G +Y G N G
Sbjct: 87 WGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNG 146
Query: 102 QLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + L P ++ L+ E V ++ G HS A T G ++ WG G LG G
Sbjct: 147 QLGLG-HTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDS 205
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ PT+V L G+ G+ S VT G+V ++G G+LGHG
Sbjct: 206 QDRY--TPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDH------ 257
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P L+ L+ +V A G+ H+ D G +Y +G ++ +
Sbjct: 258 ---VDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAA 314
Query: 281 PSLISKLPYSEE--------------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
P+ ++ + + CG HT +T GE+Y+WG NG LG G+
Sbjct: 315 PTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGA 372
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 17/250 (6%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ V+ +S G HS A+ G + WG+ +GQLG G+ A PT + L+
Sbjct: 9 EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDA 66
Query: 182 AALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G E +VAV G++ SWG G GRLGHG+ + + PR I G V
Sbjct: 67 VVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDV---------FVPRPIAFFSGRPV 117
Query: 241 KIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG 297
A G H+ + + +G +Y FG ++ N P L++ L V CG
Sbjct: 118 ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGS 177
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
H+ T G +++WG G LG G ++P RV G V V CGW+H+A ++
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVT 236
Query: 358 -EGKILTWGW 366
EG++ T+GW
Sbjct: 237 DEGRVFTFGW 246
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG G + R+ P + ++ ++ CG H+ +T+ G V+ G + +GQ
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQ 251
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +++ ++ P ++GL+ V ++ G+ H+ A +G LY WG N GQLGLG
Sbjct: 252 LGHGDHVDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSE 310
Query: 162 AKVIPIPTK-------VECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ P P ++ AL G+ +VAVT G+V SWG G +G+LGH
Sbjct: 311 DRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGH 370
Query: 212 GQESSI 217
G E +
Sbjct: 371 GAEQDL 376
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 172/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F ++ + CG HT FL E G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS + Q A G+ S+A++ GG + SWG G+LG G
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ S P+ ++ L+G+ AAG HS + +G V+ +G ++ + N
Sbjct: 173 -MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRC 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+ V+ CG HT LT G ++T+G+ G LG S + +P +V
Sbjct: 232 FPALLKAL-RSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ V Q++CG +HT A S GK+ ++G GG+
Sbjct: 290 ELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGN 324
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG +S P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L + + V+ IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
+V P KV L G Q A G + ++A T GK+ S+G GG+G+LG
Sbjct: 281 HEV--NPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + A + ++CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L VV QI+ G H+ A T G++ +G NGQLG
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRST 332
Query: 161 AAKVIPIPTK 170
+ P P K
Sbjct: 333 CNRKSPAPVK 342
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR + G +V+ G H+A + E+G
Sbjct: 1 MLCWGNASYGQLG-------LGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G++++WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLG 111
Query: 316 ENGCLGIGSID-VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+G LG+ + + + P ++ S+ V QV+CG+ H+ A+S+ G I +WG
Sbjct: 112 SDGQLGLNNFEECIRVPRNIKS-LSDVQVAQVACGYWHSLALSKGGHIFSWG 162
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q +CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S + CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G QAA G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -LDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 148/303 (48%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 175/335 (52%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q + G+ S+A++ +V SWG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ+S GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 171/334 (51%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L+ L + V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FE 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 171/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P + LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + TS P++IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 YKKQTS---PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S++VV CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPTLLKSL-RSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT A S G+I ++G GG+
Sbjct: 290 ELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT S G +Y++G NG LG G+ SP V+G
Sbjct: 287 KVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWI 346
Query: 337 PFS 339
PFS
Sbjct: 347 PFS 349
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR +V+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ +RP + L V CG HT L G++Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ SE + QV+CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEECVRVPRNIRS-LSEIQIVQVACGYYHSLALSKGSEVFSWG 162
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 170/320 (53%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4033 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4092
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4093 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4151
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G+ Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4152 TSNK--KLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGN----- 4204
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4205 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4260
Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP L+ L + +++ G HT L++ GE+Y WGSN G LG+G + + P V
Sbjct: 4261 -NRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVT 4319
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 4320 A-LQGKNIRQISAGRCHSAA 4338
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 31/335 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLG-HGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++++ L+G+ + AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPER 333
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711
Query: 334 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
V G + Q+S G H TA + +++ W
Sbjct: 712 VSG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4087 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4146
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ + Q++ G +H+ A++ DG L + +G G+LGLG
Sbjct: 4147 LGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNS 4205
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4206 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4255
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+L+ L G+ + A G H+ + +G VY +G + ++ NH R
Sbjct: 4256 -RARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVRE 4314
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4315 PTLVTAL 4321
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+FT++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 23/238 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG +GQL +A + + IP+ S +Q G + + G VL+ G
Sbjct: 3979 DVFLWGAGRHGQLA---EAGRNVMIPSGAGSFSQ--AQQVICGQNCTFVIQANGTVLACG 4033
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + + +I L+G V + + G HS + E+G V
Sbjct: 4034 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4084
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T+ G+L+T+G+ +
Sbjct: 4085 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4143
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
G LG+G+ PERV + QV+CG HT A+S L W +G G +G
Sbjct: 4144 YGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKL 4200
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 119/263 (45%), Gaps = 28/263 (10%)
Query: 121 LKKEVVQISTGYHHSSA------------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
L +EV Q+++ Y + A ++ E+Y+WG NS+ QL G + + I P
Sbjct: 339 LFEEVCQMASDYSRTCASPDSIQSGENPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQP 396
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C S T +A G + ++ G V + G G GRLG G +S+ L+ +
Sbjct: 397 KLAPCFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEP 453
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
R IK KV + H+ G V+ +GD K+ + + P LI
Sbjct: 454 HRSIK-----KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTL 508
Query: 289 YSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ VVC GY H+ +T GELYTWG + G LG G + + P V+ S V +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGE 565
Query: 346 VSCGWKHTAAISEGKILTWGWGG 368
VSCG HT A+S+ W +GG
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGG 588
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + + + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ L+ I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ L+ I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C+ F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ + G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS + Q A G+ S+A++ G +V SWG G+LG G +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G V+ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ A++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y+ P I L ++VQ++ GY+HS A++ E++ WG+N +GQLGLG
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S A+T G V WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +L ++ CG HT + S G +Y++G NG LG+GS SP V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR V+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ +RP + L V CG HT L G++Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFA 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + P ++ S+ + QV+CG+ H+ A+S+G ++ +WG
Sbjct: 112 ADGQLGLPGTEEYTRVPRNIKS-LSDVQIVQVACGYYHSLALSKGSEVFSWG 162
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C+ F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ + G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS + Q A G+ S+A++ G +V SWG G+LG G +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G V+ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 16/299 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ A++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y+ P I L ++VQ++ GY+HS A++ E++ WG+N +GQLGLG
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S A+T G V WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +L ++ CG HT + S G +Y++G NG LG+GS SP V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR V+ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ +RP + L V CG HT L G++Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFA 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + P ++ S+ + QV+CG+ H+ A+S+G ++ +WG
Sbjct: 112 ADGQLGLPGTEEYTRVPRNIKS-LSDVQIVQVACGYYHSLALSKGSEVFSWG 162
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4279 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4338 G-LQGKNVRQISAGRCHSAA 4356
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTGL 4339
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4196 HTLAVSADGSVVWAFGDGDYGKL 4218
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 166/331 (50%), Gaps = 32/331 (9%)
Query: 43 WGNGDYGRLGLG-------------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET 89
WG+ D+GR G G E +PV+ + +K +ACGGAH++ +TE+
Sbjct: 67 WGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKL----IKKVACGGAHSMIVTES 122
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G + GLND GQLG+ N+ + E + G + + ++ G+ H+ A + G+LY WG
Sbjct: 123 GRLLTCGLNDNGQLGLG-NLENASEFEEVKG-TESIADVAAGFWHTLAASKKGKLYAWGS 180
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLG A K+ P ++ L KQ A G S+A+T G+V +WG G GRL
Sbjct: 181 NKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRL 240
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG + E+ P+ ++ L G + AGF +S+ + +G+V+++G
Sbjct: 241 GHGS---------TEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHF-Y 290
Query: 270 MLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SID 326
+L Q + ++ P S ++ G +H ++ G L+TWG +G LG G S +
Sbjct: 291 VLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPN 350
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
++ P + P QV+CG +HT ++
Sbjct: 351 IILEPTVLDAPAQLQNSKQVACGSQHTLVVT 381
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G EQ V + G + SWG+ GR G G ++ I ++ E + + L +K
Sbjct: 51 GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPV--LPAKLIKK 108
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
A G HS + E+GR+ G ++ +A + +V G +HT
Sbjct: 109 VACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADVAAGFWHTLA 168
Query: 303 LTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
+ G+LY WGSN++G LG ++ + P+ + ++P+ QV+CG H+ A++ +G
Sbjct: 169 ASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEIL-LLRDAPIKQVACGSYHSMALTKDG 227
Query: 360 KILTWGWGGSHG 371
++ TWG+ G+HG
Sbjct: 228 EVYTWGF-GAHG 238
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 166/334 (49%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L+ L + + CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FE 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT A S G+I ++G GG+
Sbjct: 291 LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT S G +Y++G NG LG G+ SP V+G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR +++ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ +RP + L V CG HT L G++Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ SE + QV+CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKS-LSEIQIVQVACGYYHSLALSKGSEVFSWG 162
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 166/334 (49%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L+ L + + CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FE 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT A S G+I ++G GG+
Sbjct: 291 LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT S G +Y++G NG LG G+ SP V+G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR +++ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ +RP + L V CG HT L G++Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ SE + QV+CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKS-LSEIQIVQVACGYYHSLALSKGSEVFSWG 162
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V +++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S E+ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ G+ WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 148/300 (49%), Gaps = 22/300 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ +GE + WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 166/334 (49%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L+ L + + CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FE 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT A S G+I ++G GG+
Sbjct: 291 LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
+ +L S ++ CG HT S G +Y++G NG LG G+ SP V+G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346
Query: 337 PFS 339
P+S
Sbjct: 347 PYS 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR +++ G H+ + ++G
Sbjct: 1 MLCWGNASFGQLG-------LGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ +RP + L V CG HT L G++Y WG
Sbjct: 54 TVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLA 111
Query: 316 ENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
+G LG+ G+ + + P ++ SE + QV+CG+ H+ A+S+G ++ +WG
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKS-LSEIQIVQVACGYYHSLALSKGSEVFSWG 162
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 163/330 (49%), Gaps = 26/330 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV+ A + + +ACG HT+ L+E G VY G D G+
Sbjct: 12 WGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGR 71
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ + +VQ + G +H++A+T GELY WG G+LG G ++
Sbjct: 72 LGHGDN-GWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNES 130
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P K G Q A G +V +T GKV +WG +G +GH
Sbjct: 131 GHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADG----- 185
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y PR+++ L+ V ++AA GF H+A + G ++ +G+ ++ +
Sbjct: 186 ---HQYLPRMLESLQAKTVTQVAACGF-HTAALTAAGEIFTWGEGKFGRLGHGMERNQMV 241
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC-----------LGIGSIDV 327
P ++ L V CGG+H+ + GELYTWG E+G LG G +
Sbjct: 242 PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRK 301
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+ P V G + V +V+ +HTAA++
Sbjct: 302 VSVPTLVAG-LVKMHVVKVASYNEHTAALA 330
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 153/307 (49%), Gaps = 21/307 (6%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G VY+ G + GQLG+ + P+ + LK K VVQ++ G H+ ++ DG +Y WG
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ +G+LG G K +P VE L G QA G + AVT G++ +WG G G+
Sbjct: 66 RGDDGRLGHGDNGWKY--VPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
LGHG ES TP ++K L EG +V A G H+ + + G+VY +GD+
Sbjct: 124 LGHGNES---------GHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKE 174
Query: 267 VDKMLFQEGN-HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + H P ++ L +V G+HT LT+ GE++TWG + G LG G
Sbjct: 175 NGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHG 234
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 382
P V+ + V V+CG H+AAI G++ TWG GG HG G+ G
Sbjct: 235 MERNQMVPRMVEALMGKR-VGHVACGGFHSAAILDSGELYTWG-GGEHGQVYTFGNGDHG 292
Query: 383 QLDRGQL 389
+L G +
Sbjct: 293 KLGHGDV 299
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 123/259 (47%), Gaps = 28/259 (10%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
V G +Y WG+ +GQLGLG + P+ V+ L Q A G +V ++ G V
Sbjct: 5 VAGLVYSWGRGEDGQLGLGDTNDQDRPVL--VDALKSKGVVQVACGSGHTVVLSEDGAVY 62
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG G GRLGHG +Y PR+++ LEG ++ A G H+A + + G +
Sbjct: 63 TWGRGDDGRLGHGDNG---------WKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113
Query: 260 YIFGDRAVDKMLFQEGNHARRPS--LISKL----PYSEEVVCGGYHTCVLTSGGELYTWG 313
Y +G K+ GN + P+ ++ L ++ CG HT VLT G++YTWG
Sbjct: 114 YTWGGGMYGKL--GHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQV-SCGWKHTAAISEGKILTWGWGGSHGT 372
ENG +G + D R+ V QV +CG+ A + G+I TWG G
Sbjct: 172 DKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWG----EGK 227
Query: 373 FSEDGHSSGGQLDRGQLTP 391
F GH ++R Q+ P
Sbjct: 228 FGRLGHG----MERNQMVP 242
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 173/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 26/312 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Query: 337 ---PFS-ESPVD 344
P++ + P D
Sbjct: 344 NWFPYNGQCPTD 355
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4074
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4075 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4133
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4134 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4186
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4187 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4242
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4243 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4301
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4302 G-LQGKNVRQISAGRCHSAA 4320
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4069 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4128
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4129 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4187
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4188 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4237
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4238 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4296
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4297 PTLVTGL 4303
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3936 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3991
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3992 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4041
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4042 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4100
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4101 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4159
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4160 HTLAVSADGSMVWAFGDGDYGKL 4182
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4105 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4273 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4332 G-LQGKNVRQISAGRCHSAA 4350
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4217
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4218 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4268 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4327 PTLVTGL 4333
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4189
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4190 HTLAVSADGSMVWAFGDGDYGKL 4212
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4265 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4323
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4324 G-LQGKNVRQISAGRCHSAA 4342
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4319 PTLVTGL 4325
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4181
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4182 HTLAVSADGSMVWAFGDGDYGKL 4204
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 167/342 (48%), Gaps = 21/342 (6%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTL-FLTETGCV 92
L + WG G+ G+LG G E R P + S F+ + ++ CG HT + E +
Sbjct: 36 LSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQL 95
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
Y+ G DFG+LG N P I L+ ++ QI+ G H A+T G+++ WG+N
Sbjct: 96 YSWGWGDFGRLGHG-NSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ 154
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLGLG ++P K+ G+ K A G E + A+ G + WG G G LG
Sbjct: 155 NGQLGLGNTEDSLLP--QKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGL 212
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + L P + +EG K+ + A G+ H+ + +G +Y +G ++
Sbjct: 213 GDRNDRL---------VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLG 263
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ P + L + ++ G HT + G+LY WG N+ G +G+ +V H
Sbjct: 264 HGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVAD-NVDH 322
Query: 330 -SPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
SP +V P E V QV+CGW+HT A++E K + +WG G S
Sbjct: 323 CSPVQVIFP-DEQKVAQVACGWRHTLALTENKNVFSWGRGTS 363
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 147/298 (49%), Gaps = 19/298 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T+ G V++ G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V+ I+ G H++AI DG+LY WG G LGLG +
Sbjct: 158 LGLG-NTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRN 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ +V V+ G + ++G G+LGHG L
Sbjct: 217 DRL--VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-NHARR 280
P ++ L+ + A G+ H+ + +G++Y +G ++ + +H
Sbjct: 272 ------VPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSP 325
Query: 281 PSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+I P + +V CG HT LT +++WG +G LG G I ++P+ +
Sbjct: 326 VQVI--FPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMID 381
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 21/304 (6%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
+ ++ ++ G H++ L + V + G + GQLG + + P +SG +
Sbjct: 19 EQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV-PTLLSGFDVPGIASV 77
Query: 128 ISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ G H++A + + +LY WG G+LG G + P P +E L GI KQ A G
Sbjct: 78 VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQP--IEALQGIKIKQIACGD 135
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+AVT G+V SWG +G+LG G E S+L P+ I EGV VK+ AA
Sbjct: 136 SHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL----------PQKIHAFEGVCVKMIAA 185
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVL 303
G H+A I E+G +Y +G + + N P +S + + V+ CG HT +
Sbjct: 186 GAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTV 245
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 362
+S G+LYT+G ++ G LG G + P +++ + + Q++ GW+HT A++ +GK+
Sbjct: 246 SSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDRFISQIAGGWRHTMAVAGDGKLY 304
Query: 363 TWGW 366
WGW
Sbjct: 305 GWGW 308
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V G H+ L S + +WG E+G LG G + P + G V CG H
Sbjct: 25 VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADH 84
Query: 353 TAAISEG--KILTWGWG 367
T A S+ ++ +WGWG
Sbjct: 85 TTAYSDEQMQLYSWGWG 101
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V +++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S E+ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4104 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4216 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4272 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4330
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4331 G-LQGKNVRQISAGRCHSAA 4349
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4216
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4217 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4267 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4325
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4326 PTLVTGL 4332
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4188
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4189 HTLAVSADGSMVWAFGDGDYGKL 4211
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V +++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S E+ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V +++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S E+ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1691
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1692 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1750
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 1751 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1803
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 1804 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1859
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 1860 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 1918
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 1919 G-LQGKNVRQISAGRCHSAA 1937
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 1686 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1745
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 1746 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 1805 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1854
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 1855 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 1913
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 1914 PTLVTGL 1920
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 1553 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1608
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 1609 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1658
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 1659 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1717
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 1718 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 1776
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 1777 HTLAVSADGSMVWAFGDGDYGKL 1799
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2564
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2565 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2623
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 2624 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2676
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 2677 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2732
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 2733 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 2791
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 2792 G-LQGKNVRQISAGRCHSAA 2810
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2559 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2618
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 2619 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2677
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2678 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2727
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 2728 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 2786
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 2787 PTLVTGL 2793
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 2426 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2481
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 2482 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2531
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 2532 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2590
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 2591 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 2649
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 2650 HTLAVSADGSMVWAFGDGDYGKL 2672
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 173/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L ++++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 26/312 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + +L S ++ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Query: 337 ---PFS-ESPVD 344
P++ + P D
Sbjct: 344 NWFPYNGQCPTD 355
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3752
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3753 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3811
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 3812 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3864
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3865 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3920
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 3921 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVT 3979
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 3980 G-LQGKNVRQISAGRCHSAA 3998
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
G + Q+S G H+ A
Sbjct: 713 SG-LDGIAIQQISAGTSHSLA 732
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3747 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3806
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 3807 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3865
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3866 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3915
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 3916 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 3974
Query: 281 PSLISKL 287
P++++ L
Sbjct: 3975 PTVVTGL 3981
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 154/339 (45%), Gaps = 39/339 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS------LEPLRISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQ 154
+LG+ ++ S EP R +KK V S G H+ A T +GE++ WG G+
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHR--SIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGK 489
Query: 155 LGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG G +K K+I P L G + G+ S AVT G++ +WG G GRLG
Sbjct: 490 LGHGNSSTQKYPKLIQGP-----LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDK 269
HG S S P L+K++ V + G H+ + ++GR V+ FG K
Sbjct: 545 HGD---------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+ + N +P +I L + +V G + LTS G++Y WG CLG GS +
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEA 651
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
++ + + + VS G H A+S + ++ WG
Sbjct: 652 TALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3614 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3669
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3670 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3719
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 3720 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3778
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 3779 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 3837
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 3838 HTLAVSADGSMVWAFGDGDYGKL 3860
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ P KV L GI +Q + G S+A T
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V +++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S E+ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + Q+S G H+AA
Sbjct: 4339 G-LQGKNIRQISAGRCHSAA 4357
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V +++CG +HT+A S G+I ++G GG+
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S E+ CG HT + S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + Q+S G H+AA
Sbjct: 4339 G-LQGKNIRQISAGRCHSAA 4357
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4048
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4049 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4107
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4108 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4160
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4161 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4216
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4217 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4275
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4276 G-LQGKNVRQISAGRCHSAA 4294
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4043 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4102
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4103 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4161
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4162 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4211
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4212 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4270
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4271 PTLVTGL 4277
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3910 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3965
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3966 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4015
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4016 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4074
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4075 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4133
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4134 HTLAVSVDGSMVWAFGDGDYGKL 4156
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 18/304 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ ++ ++ CG HT +E VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + GLK + QI+ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT 154
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++P K++ + K A G E + AVT G + WG G G LG G + L
Sbjct: 155 TEDSLLP--QKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL- 211
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + +EG K+ + A G+ H+ + ++G +Y +G ++ +
Sbjct: 212 --------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 263
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L S ++ G HT LTS G+LY WG N+ G +G+G+ D SP +V P
Sbjct: 264 VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP 323
Query: 338 FSES 341
SE+
Sbjct: 324 GSEN 327
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 159/317 (50%), Gaps = 22/317 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++ G +H++ L + + G + GQLG + L P +SG + + G H
Sbjct: 18 VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAED-RLVPTVLSGFDAPAITSVICGADH 76
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
++A + D ++Y WG G+LG G + P P K L G+ KQ A G +AVT
Sbjct: 77 TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKA--LQGLKIKQIACGDSHCLAVT 134
Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+V SWG +G+LG G E S+L P+ I+ E V VK+ AAG H+A
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFESVCVKMIAAGAEHTAA 184
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
+ E+G +Y +G + + N P +S + + V+ CG HT ++ G LY
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 244
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG-- 367
T+G ++ G LG G + P +V+ +S + Q+S GW+HT A+ SEGK+ WGW
Sbjct: 245 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQISGGWRHTMALTSEGKLYGWGWNKF 303
Query: 368 GSHGTFSEDGHSSGGQL 384
G G + D HSS GQ+
Sbjct: 304 GQVGVGNNDDHSSPGQV 320
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4115 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4173
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4227 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4283 -NRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4341
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4342 G-LQGKNVRQISAGRCHSAA 4360
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4228 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4278 -RARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4336
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4337 PTLVTGL 4343
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4031
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4032 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4141 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4199
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4200 HTLAVSADGSMVWAFGDGDYGKL 4222
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4105 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4273 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4332 G-LQGKNVRQISAGRCHSAA 4350
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4217
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4218 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4268 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4327 PTLVTGL 4333
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4189
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4190 HTLAVSVDGSMVWAFGDGDYGKL 4212
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSVDGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP + L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V Q+S G H+AA
Sbjct: 4338 G-LQGKNVRQISAGRCHSAA 4356
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTGL 4339
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4196 HTLAVSADGSMVWAFGDGDYGKL 4218
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 170/320 (53%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4127 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4186
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4187 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4245
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P KV L G Q A G ++ V+ G ++ ++G G G+LG G
Sbjct: 4246 TSNK--KLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGN----- 4298
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G+V+ FG DR + + NH
Sbjct: 4299 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNH 4354
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP + L + ++V G HT VL+S G++YTWGSN G LG+G + + P V
Sbjct: 4355 -NRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVT 4413
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 4414 T-LQGKNIHQISAGRCHSAA 4432
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H ++K ++ HTL T G V++ G D
Sbjct: 435 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 493
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 494 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 553
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 554 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 609
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 610 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 659
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 660 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 719
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 720 IG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4181 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4240
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P +++ L+ V Q++ G +H+ ++ DG + + +G G+LGLG
Sbjct: 4241 LGLGNTSNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 4299
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T GKV ++G L G
Sbjct: 4300 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEG-------- 4349
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L G+ ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4350 -RARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVRE 4408
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4409 PTLVTTL 4415
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 26/298 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 372 TPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFADAQTIEAGQYCTFVISS 427
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 488 SWGDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGE 538
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 539 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 598
Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 599 GKLGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 652
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 23/238 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG +GQL +A + I +PT S +Q G + + G VL+ G
Sbjct: 4073 DVFLWGAGRHGQLA---EAGRNILVPTIAPSFSQ--AQQVVCGQNCTFVIQPNGTVLACG 4127
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + + +I L+G V + + G HS + E+G V
Sbjct: 4128 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4178
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T+ G+L+T+G+ +
Sbjct: 4179 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4237
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
G LG+G+ PE+V V QV+CG HT +S ++ W +G G +G
Sbjct: 4238 YGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKL 4294
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 650
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 651 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 710
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 711 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ V+ +V WG+ S +L G + IL P+L + AG
Sbjct: 371 ETPVVSETCEVYVWGSNSSHQLVEGTQEKIL---------QPKLASSF--ADAQTIEAGQ 419
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY--------H 299
+ I +G V G + ++ + N+ S + KL + H
Sbjct: 420 YCTFVISSDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEPHRAIKKVSSSKGSDGH 476
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
T T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA+SE
Sbjct: 477 TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED 536
Query: 359 GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 537 GELYTWG----EGDFGRLGH 552
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4115 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4173
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV T G V ++G G G+LG G
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4227 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP + L + E++ G HT L+S G++Y WGSN G LG+G + + P V
Sbjct: 4283 -NRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4341
Query: 336 GPFSESPVDQVSCGWKHTAA 355
V Q+S G H+AA
Sbjct: 4342 V-LQGKNVRQISAGRCHSAA 4360
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 163/334 (48%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP K I + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRNIPTLVK----DIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 GG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4228 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4278 -RARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4336
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4337 PTLVTVL 4343
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSP- 4031
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4032 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+T+ G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4141 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4199
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4200 HTVAVSTDGSMVWAFGDGDYGKL 4222
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
+LG ++ + I L K+++ ++S G H+ A++ DG ++ +G NG+LG
Sbjct: 542 RLGHGDSNSRN-----IPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 GD--TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSE 650
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 651 ATALR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L GI +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVGGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 159/296 (53%), Gaps = 21/296 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + + SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3238 GEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3297
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +E++Q++ G+ HS+ ++ DG+L+ +G G+LGLG
Sbjct: 3298 GKLGHG-NSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ K IP +V L G Q G ++AV+ G V S+G G G+LG G
Sbjct: 3357 TSNKK--IPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGN----- 3409
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ TP+ + L G+ VK G S + ++GRV+ FG +R + + + NH
Sbjct: 3410 ----STAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNH 3465
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
RP + L + E+VV G H+ LTS GE++ WGSN +G LGIG + P
Sbjct: 3466 -NRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREP 3520
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 31/313 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + +ACG H+ ++ G ++ G D+G+
Sbjct: 3292 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGR 3351
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ N P R++ L+ ++V Q+ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 3352 LGLG-NTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNS 3410
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P +V+ L GI K+ G + SVA+T G+V ++ G RL ES
Sbjct: 3411 TAKS--TPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTF---GQERLIGQPES----- 3460
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
RS + P+ + LE V+ G HS + G V+ +G ++ + N R
Sbjct: 3461 -RSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARRE 3519
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P L++ L WGSN +G LGIG + P V
Sbjct: 3520 PCLVT----------------ALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTD-LQG 3562
Query: 341 SPVDQVSCGWKHT 353
V Q+S G H+
Sbjct: 3563 KNVRQISAGRNHS 3575
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 22/272 (8%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQL G SL ++ + QI G + + I +G + G+ S G+LG G
Sbjct: 3194 GQLA---ETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGSYGRLGQGN- 3249
Query: 161 AAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ + T + L G Q + G + S+A+T G+V SWG G G+LGHG
Sbjct: 3250 -SDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN---- 3304
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + PR I+ L+G ++ A GF HSA + +G+++ FG+ ++ ++
Sbjct: 3305 -----SDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSN 3359
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSIDVLHSPERV 334
+ P ++ L +V CG HT +++ G ++++G + G LG+G+ +P+RV
Sbjct: 3360 KKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRV 3419
Query: 335 QGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
P V +V CG + + A++ +G++ T+G
Sbjct: 3420 D-PLCGIGVKKVCCGTQFSVALTKDGRVFTFG 3450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E YMWG +GQL + + + PT S +Q G + + G V + G
Sbjct: 3184 EAYMWGGGRHGQLA---ETGRSLLTPTVTPSFSQ--AQQIICGQNCTFVIQANGTVQACG 3238
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + + +I L+G V + + G HS + E+G V
Sbjct: 3239 EGSYGRLGQGNSDDL---------HQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEV 3289
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD K+ + RRP I L E ++ CG H+ V+++ G+L+T+G+ +
Sbjct: 3290 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDY 3349
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
G LG+G+ PERV V QV CG HT A+S W +G G +G
Sbjct: 3350 GRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKL 3405
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 169/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV T G V ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP + L + E++ G HT L+S G++Y WGSN G LG+G + + P +
Sbjct: 4279 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4337
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4338 VLQG----KNIRQISAGRCHSAA 4356
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4333 PTLITVL 4339
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+T+ G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4137 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4196 HTVAVSTDGSMVWAFGDGDYGKL 4218
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L G+ +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 166/334 (49%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG GQ+GL
Sbjct: 64 GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I +P ++ LS + Q A G S+A++ + SWG G+LG G
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L+ L + + CG HT LT G ++T+G+ G LG S + +P +V
Sbjct: 232 VPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-FE 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT A S G+I ++G GG+
Sbjct: 291 LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN 324
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G +GQ+
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ D +++ WG+N GQLGLG +
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ ++ L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G
Sbjct: 281 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 173/335 (51%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+++V CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V +++CG +HT+ S G+I ++G GG+
Sbjct: 290 ELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGN 324
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S E+ CG HT S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + S V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSN 334
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 166/334 (49%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG GQ+GL
Sbjct: 64 GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I +P ++ LS + Q A G S+A++ + SWG G+LG G
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L+ L + + CG HT LT G ++T+G+ G LG S + +P +V
Sbjct: 232 VPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-FE 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG +HT A S G+I ++G GG+
Sbjct: 291 LMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN 324
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G +GQ+
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ D +++ WG+N GQLGLG +
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT S G +Y++G NG LG GS SP V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ ++ L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G
Sbjct: 281 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 167/338 (49%), Gaps = 23/338 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ ++ PV + + S+ ALA G H+L L G V+A G N FGQ
Sbjct: 61 WGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQ 118
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+++ L VV I+ G HHS A+ DG ++ WG N++GQLG A
Sbjct: 119 LGDGSDA-QSQVPIQVWSLNG-VVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVA 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+P +V+ LSG+ A G S+AV GKV +WG G+LG G
Sbjct: 177 S--PLPVQVQGLSGVVALSA--GSTHSLAVLSDGKVKAWGDNYYGQLGDGS--------- 223
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST +TP L+ L GVK +A G HS + +G V +G+ ++ P
Sbjct: 224 STERWTPVLVSSLTGVKSVVA--GTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPV 281
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++ L + + G H+ L S G + WG+N++G +G G+I +P +V G
Sbjct: 282 VVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPG---VGR 338
Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
+ ++ G H+ A+ I TW WG DG SS
Sbjct: 339 MKSIAAGGAHSLAMRADGI-TWAWGDDSQGQLGDGQSS 375
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 165/353 (46%), Gaps = 32/353 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG G+ S PV ++K +A GG+H+L + G V+A G N G+
Sbjct: 711 WGNNAYGQLGDGT--STLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGE 768
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL V +S G +HS A+ DG ++ WG NS GQLG G
Sbjct: 769 LGDGTGL-QRPRPVQVQGLGSAVA-VSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGIT 826
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L+G+ A G S+A+ G V +WG G+LG
Sbjct: 827 RYVPV--RVSGLNGVMAVSA--GSAHSLALRSDGTVWAWGYNFYGQLGDAT--------- 873
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
ST P + L GV V IAA G HS + +G V+ +G ++ +G +R
Sbjct: 874 STQRLVPIQVPGLTGV-VSIAA-GTHHSLAVRSDGTVWAWGYNFYGQL--GDGTKIQRSP 929
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + L V G YH+ + S G ++ WG N +G LG G+ P + S
Sbjct: 930 PVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPIS---SS 986
Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
S V + W ++G + WGWG ++ + DG +S DR TPS
Sbjct: 987 SGVIAAAANWHSLVVRTDGTV--WGWGSNNASQLGDGSTS----DRKMPTPSS 1033
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 157/330 (47%), Gaps = 27/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R PV + ++ H+L ++ G V+A G N G+
Sbjct: 461 WGDNAFGQLGDGTTTQRLLPVQVPGLA--GVDTVSSMHQHSLAVSRDGTVWAWGFNGSGR 518
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL +V ++ G HS A+ DG ++ WG NSNG LG G
Sbjct: 519 LGDGTTL-SRLTPVQVPGLS-SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLR 576
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG+ A G+ S+AV G V +WG G G+LG G
Sbjct: 577 RLSPV--QVPGLSGVVALAAGNGY--SLAVDAQGSVWAWGYNGMGQLGDG---------T 623
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T TP L GV AAG HS + +G + +G D+ + R
Sbjct: 624 TTPRVTPTQAPALSGVVAL--AAGDSHSLALRADGVAWAWGGN--DQGQLGDATTLERST 679
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P+ + L + + G H+ VL + G +WG+N G LG G+ + P +V GP
Sbjct: 680 PAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGP--- 736
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
S + V+ G H+ A+ S+G + WG GS
Sbjct: 737 SAMKGVAAGGSHSLAVRSDGTVWAWGNNGS 766
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 153/319 (47%), Gaps = 29/319 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G AH+L L G V+A G N +GQLG I L P+R+ L VV ++ GY HS
Sbjct: 42 VAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRL-PVRVQSLD-SVVALAVGYQHS 99
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N GQLG G A +PI +V L+G+ A G S+A+
Sbjct: 100 LALRSDGTVWAWGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAA--GDHHSLALLSD 155
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG ++++ L P ++ L GV +AG HS +
Sbjct: 156 GSVWAWGYNAHGQLG--DDTTVASPL-------PVQVQGLSGVVAL--SAGSTHSLAVLS 204
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G+V +GD ++ P L+S L + VV G +H+ L S G + WG N
Sbjct: 205 DGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGEN 264
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
+G LGI S P V G + V ++ G H+ A+ S+G + WG +
Sbjct: 265 GSGQLGISSTTRRPVPVVVPG---LTNVQALAAGSAHSLALRSDGTVRAWG-------NN 314
Query: 375 EDGHSSGGQLDRGQLTPSE 393
+ G G + + QLTP +
Sbjct: 315 DHGQVGNGTISQ-QLTPVQ 332
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 164/352 (46%), Gaps = 39/352 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D+G++G G++ + PV + +K++A GGAH+L + G +A G + GQ
Sbjct: 311 WGNNDHGQVGNGTISQQLTPVQVPGVGR--MKSIAAGGAHSLAMRADGITWAWGDDSQGQ 368
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ L P R+ G ++ + + TG HS A+ DG ++ WG N+ GQLG G
Sbjct: 369 LGDGQS-SQQLRPARVLG-QRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLP 426
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L+G+ T A S+A G V +WG G+LG G
Sbjct: 427 RTLPV--QVPGLAGVHTLSAT--TSHSLAARADGTVWAWGDNAFGQLGDG---------T 473
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T P + L GV ++ HS + +G V+ +G ++ +G R
Sbjct: 474 TTQRLLPVQVPGLAGVDT--VSSMHQHSLAVSRDGTVWAWGFNGSGRL--GDGTTLSRLT 529
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + L V G H+ L + G ++ WG N NG LG G+ SP +V G
Sbjct: 530 PVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPG---L 586
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
S V ++ G ++ A+ ++G + WG+ G GQL G TP
Sbjct: 587 SGVVALAAGNGYSLAVDAQGSVWAWGYNGM------------GQLGDGTTTP 626
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 141/294 (47%), Gaps = 20/294 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R+ PV S + + A++ G AH+L L G V+A G N +GQ
Sbjct: 811 WGGNSQGQLGDGTGITRYVPVRVSGL--NGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQ 868
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + L P+++ GL VV I+ G HHS A+ DG ++ WG N GQLG G K
Sbjct: 869 LGDATST-QRLVPIQVPGLTG-VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQ 926
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+G+ + A G S+AV G V +WG G+LG G
Sbjct: 927 RSPPV--QVPGLAGMVS--VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDG---------T 973
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P I GV IAAA HS + +G V+ +G ++ + + P+
Sbjct: 974 TTQRLLPVPISSSSGV---IAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPT 1030
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
S + G H+ L S G ++ WG +G LG G + + P V G
Sbjct: 1031 PSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAGVSG 1084
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G LG G+ R RPV S A++ G H+L + G V+A G N GQ
Sbjct: 761 WGNNGSGELGDGTGLQRPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQ 818
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+R+SGL V+ +S G HS A+ DG ++ WG N GQLG
Sbjct: 819 LGDGTGITRYV-PVRVSGLNG-VMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQ 876
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++PI +V L+G+ + A G S+AV G V +WG G+LG G + R
Sbjct: 877 RLVPI--QVPGLTGVVSIAA--GTHHSLAVRSDGTVWAWGYNFYGQLGDGTK-----IQR 927
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S P L + AAG HS + NG V+ +G + +G +R
Sbjct: 928 SPPVQVPGLAGMVS------VAAGTYHSLAVHSNGTVWAWGYN--NHGQLGDGTTTQR-- 977
Query: 283 LISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +P S +H+ V+ + G ++ WGSN LG GS P P
Sbjct: 978 -LLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPTPSSVPN 1036
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
V +S G H+ A+ S+G + WG+G S
Sbjct: 1037 G---VRSISSGANHSLALRSDGTVWAWGFGNS 1065
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 148/324 (45%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG GS P+ + + + A+A G H+L L G V+A G N GQ
Sbjct: 111 WGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQ 168
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL VV +S G HS A+ DG++ WG N GQLG G
Sbjct: 169 LGDDTTVASPL-PVQVQGLSG-VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTE 226
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+G+ K G S+A+ G V +WG GSG+ LG
Sbjct: 227 RWTPV--LVSSLTGV--KSVVAGTFHSLALCSDGTVRAWGENGSGQ---------LGISS 273
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P ++ L V+ AAG HS + +G V +G+ ++ + P
Sbjct: 274 TTRRPVPVVVPGL--TNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPV 331
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ + + + GG H+ + + G + WG + G LG G P RV G P
Sbjct: 332 QVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP 391
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
+ G +H+ A+ ++G + WG
Sbjct: 392 ---LGTGNRHSLALHADGTVWAWG 412
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 152/326 (46%), Gaps = 25/326 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P A + ALA G +H+L L G +A G ND GQ
Sbjct: 611 WGYNGMGQLGDGTTTPRVTPTQAPALS--GVVALAAGDSHSLALRADGVAWAWGGNDQGQ 668
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + S P + GL VV ++ G HS + DG WG N+ GQLG G +
Sbjct: 669 LGDATTLERS-TPAAVPGLA-HVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGT--S 724
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P +V S + K A G S+AV G V +WG GSG LG G G R
Sbjct: 725 TLHPVPVQVPGPSAM--KGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGT-----GLQR 777
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR + +++G+ +A +AG HS + +G V+ +G + ++ G P
Sbjct: 778 ------PRPV-QVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVP 830
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+S L V G H+ L S G ++ WG N G LG + P +V G +
Sbjct: 831 VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPG---LT 887
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGW 366
V ++ G H+ A+ S+G + WG+
Sbjct: 888 GVVSIAAGTHHSLAVRSDGTVWAWGY 913
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 151/369 (40%), Gaps = 61/369 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G+ SR PV S+ A+A G H+L L G V+A G N G
Sbjct: 511 WGFNGSGRLGDGTTLSRLTPVQVPGLS--SMVAVAAGSTHSLALRADGTVWAWGDNSNGA 568
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL VV ++ G +S A+ G ++ WG N GQLG G
Sbjct: 569 LGDGTTL-RRLSPVQVPGLSG-VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTP 626
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V P T+ LSG+ A G S+A+ G +WG G+LG R
Sbjct: 627 RVTP--TQAPALSGVVALAA--GDSHSLALRADGVAWAWGGNDQGQLGDATT-----LER 677
Query: 223 STSEYTPRL------------------------------------IKELEGVKVKI---- 242
ST P L L V V++
Sbjct: 678 STPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGPS 737
Query: 243 ----AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
AAG HS + +G V+ +G+ ++ G RP + L + V G
Sbjct: 738 AMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLGSAVAVSAGTN 797
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
H+ + S G ++ WG N G LG G+ + P RV G + V VS G H+ A+ S
Sbjct: 798 HSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSG---LNGVMAVSAGSAHSLALRS 854
Query: 358 EGKILTWGW 366
+G + WG+
Sbjct: 855 DGTVWAWGY 863
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 168 PTKVECL---SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P+++E + +Q A G S+ + G V +WG G+LG G
Sbjct: 25 PSRIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDG---------TGI 75
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ P ++ L+ V A G+ HS + +G V+ +GD ++ ++ P +
Sbjct: 76 TQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQV 133
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
L + G +H+ L S G ++ WG N +G LG + P +VQG S V
Sbjct: 134 WSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG---LSGVV 190
Query: 345 QVSCGWKHT-AAISEGKILTWG 365
+S G H+ A +S+GK+ WG
Sbjct: 191 ALSAGSTHSLAVLSDGKVKAWG 212
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 170/326 (52%), Gaps = 22/326 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4203 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4261
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G + A G ++ V T G V ++G G G+LG G
Sbjct: 4262 TSNK--KLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGN----- 4314
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4315 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4370
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP + L + E++ G HT L++ G++Y WGSN G LG+G + + P V
Sbjct: 4371 -NRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4429
Query: 336 GPFSESPVDQVSCGWKHTAAISEGKI 361
+S V Q+S G H+AA S +
Sbjct: 4430 SLQGKS-VRQISAGRCHSAAWSSPPV 4454
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 430 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 488
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 489 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 548
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 549 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 604
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 605 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 654
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 655 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 714
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 715 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4197 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4256
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ +++ G +H+ ++ DG + + +G G+LGLG
Sbjct: 4257 LGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4316 TAKS--SPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4365
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV V+ A G H+ + +G VY +G + ++ NH R
Sbjct: 4366 -RARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVRE 4424
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4425 PTLVTSL 4431
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 26/307 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
G ++ET VY G N QL G E I L+P +++ + I G + +
Sbjct: 364 GGDAPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFV 419
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGG 196
I+ DG + GK S G+LGLG + E I ++ G + ++A T G
Sbjct: 420 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 479
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
+V SWG G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E
Sbjct: 480 EVFSWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGS 314
+G +Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 590
Query: 315 NENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
+NG LG G + ++ P E +QG F + +V G + + A+ S G++ WG G
Sbjct: 591 GDNGKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACL 646
Query: 371 GTFSEDG 377
G S +
Sbjct: 647 GCGSSEA 653
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 484 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 543
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 544 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 600
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G G + +++
Sbjct: 601 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 656
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 657 -------RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 696
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 112/238 (47%), Gaps = 23/238 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG +GQL + A V P P+ C + +Q G + + G VL+ G
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNA-VSPPPSPSFCQA----QQVICGQNCTFVIQANGTVLACG 4143
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + + +I L+G V + + G HS + E+G V
Sbjct: 4144 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4194
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T+ G+L+T+G+ +
Sbjct: 4195 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4253
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
G LG+G+ PERV + +V+CG HT +S + W +G G +G
Sbjct: 4254 YGRLGLGNTSNKKLPERVAA-LEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKL 4310
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 645
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 646 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 705
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 706 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 537 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 594
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 595 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 651
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 652 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 703
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 704 --STGPITKPKKVSGLDGVAIQQISAGTSHS 732
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 531 DGELYTWG----EGDFGRLGH 547
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + + +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP + L + E+V G HT L+S G++Y WGSN G LG+G + + P +
Sbjct: 4265 -NRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIS 4323
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 4324 A-LQGKNIQQISAGRCHSAA 4342
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G +++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG+ L P R+S L+ +V Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISKL 287
P+LIS L
Sbjct: 4319 PTLISAL 4325
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H ++K ++ HTL T G V++ G D
Sbjct: 423 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGD 481
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 482 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 541
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP T V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 542 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 597
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 598 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 647
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 648 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 707
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 708 IG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 362 MVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISSDG 417
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 418 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSW 477
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 478 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 528
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 529 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 588
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 589 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 640
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+SG+ ++V+ +T + ++++WG +GQL +A + I +PT S
Sbjct: 3958 VSGMDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTLAPSFSQ- 4013
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G V + G G GRLG G + + +I L+G
Sbjct: 4014 -AQQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4064 FVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+++G+ + G LG+G+ PERV V QV+CG
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSA-LEGHQVGQVACGLN 4181
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4182 HTLAVSADGMTVWAFGDGDYGKL 4204
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 638
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 639 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 698
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 699 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ V+ +V WG+ S +L G + IL P+L + AG
Sbjct: 359 EAAMVSETCEVYVWGSNSSHQLVEGTQEKIL---------QPKLAPSFSDAQT--IEAGQ 407
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY--------H 299
+ I +G V G + ++ + N+ S + KL + H
Sbjct: 408 YCTFVISSDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEPHRAIKKVSSSKGSDGH 464
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
T TS GE+++WG + G LG G+ P+ +QGP V VS G++H+AA+SE
Sbjct: 465 TLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED 524
Query: 359 GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 525 GELYTWG----EGDFGRLGH 540
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 167/320 (52%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3584
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3585 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 3643
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV+ G V ++G G G+LG G
Sbjct: 3644 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGN----- 3696
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3697 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3752
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP + L + E++ G HT L+S G++Y WGSN G LG+G + + P +
Sbjct: 3753 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 3811
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 3812 V-LQGKNIRQISAGRCHSAA 3830
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3579 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 3638
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A+++DG + + +G G+LGLG
Sbjct: 3639 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS 3697
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3698 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3747
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 3748 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 3806
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 3807 PTLITVL 3813
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3446 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 3501
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3502 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3551
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 3552 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3610
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+T+ G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 3611 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 3669
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 3670 HTVAVSMDGSMVWAFGDGDYGKL 3692
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G G + +++
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 654
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 655 -------RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L G+ +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 167/323 (51%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV T G V ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4279 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4338 VLQG----KNIRQISAGRCHSAA 4356
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP L+ +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTVL 4339
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4196 HTLAVSTDGSMVWAFGDGDYGKL 4218
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+L++EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P + L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P VE L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4104 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4216 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4272 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4330
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 4331 V-LQGKNIRQISAGRCHSAA 4349
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4216
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4217 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4267 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4325
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4326 PTLVTVL 4332
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4188
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4189 HTLAVSADGSVVWAFGDGDYGKL 4211
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4265 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4323
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 4324 V-LQGKNIRQISAGRCHSAA 4342
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4319 PTLVTVL 4325
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4181
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4182 HTLAVSADGSVVWAFGDGDYGKL 4204
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 144 bits (364), Expect = 5e-32, Method: Composition-based stats.
Identities = 110/351 (31%), Positives = 164/351 (46%), Gaps = 33/351 (9%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG G +S+ P F + +++CG ++ LTE G VY G
Sbjct: 593 WGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGS 652
Query: 100 FGQLGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+S SLE P ++ L EVV +S GY+HS+A+ +GEL WG +GQL
Sbjct: 653 VKNPPLSTLGNGSLEDQLLPTKVESLS-EVVLVSIGYYHSAALKSNGELLTWGCGEDGQL 711
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + IP V+ ++ + Q G + ++ +T GKV +WG G+LG G
Sbjct: 712 GHGDVLNQT--IPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD-- 767
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ TP L+ LE + A G H A + V +FG+ A
Sbjct: 768 -------TQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAA----MGSA 816
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
N P ++ L + E + CG Y T LT G++YTWGS + LG G+ P+
Sbjct: 817 NIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQE--LGHGTNQSELHPKL 874
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
V G S+S + Q+SCG +H A +++ GKI T G F + GH+ G Q
Sbjct: 875 VDGLRSQS-IRQISCGGRHMAFLTDSGKIYTCG----KDPFGQLGHAQGDQ 920
Score = 103 bits (257), Expect = 2e-19, Method: Composition-based stats.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G + ++ P V H + + CG HT+ LT+ G V+ G +++GQ
Sbjct: 703 WGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 762
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + P+ ++ L+K ++QI+ G H + +T E+ ++G G +
Sbjct: 763 LGLGDT-QKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGN------GAAMGS 815
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A +I +P V L + ++ + G + A+T G V +WG+G LGHG
Sbjct: 816 ANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSG--QELGHGT-------- 865
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ SE P+L+ L ++ + G H A + ++G++Y G ++ +G+ +P
Sbjct: 866 -NQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQGDQ-NKP 923
Query: 282 SLISKLPYSE--EVVCGGYHTCVL 303
I L + V CG H L
Sbjct: 924 KKIDSLLKTTFISVSCGENHNASL 947
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 182/373 (48%), Gaps = 46/373 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LGL + + + P +K + G + ++ LT G VY+ G N G
Sbjct: 54 WGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGI 113
Query: 103 LGISENIGYSL-EPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
LG + + +++ +P RI L K++ QIS G H +A+T DGE+Y WG G+LG +
Sbjct: 114 LGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEE 173
Query: 160 -KAAKVIPI---------------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
K + I I P K+E L I KQ A G + +V ++ GKV ++G
Sbjct: 174 LKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGY 233
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G LG+ + + S TP+LIK+L + VKI +AG+ A I + G++Y +G
Sbjct: 234 NQYGSLGYVSDQN--------SVTTPQLIKDLNDI-VKI-SAGYSFCAAITKQGKLYTWG 283
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ + + +PS+++ +V CG LT G+LYTWG +G L
Sbjct: 284 NNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQL 343
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
G G+ L++P V+ F + + +++CG H A I+E L + G S
Sbjct: 344 GHGNKSDLYAPRHVE--FKQKII-KIACGGSHAAFITEDNQLY-----------QFGRGS 389
Query: 381 GGQLDRGQLTPSE 393
GQL GQ SE
Sbjct: 390 EGQLGIGQNVASE 402
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 142/301 (47%), Gaps = 18/301 (5%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY+ G FGQLG+ Y P I L K++ ++ G S A+T +GE+Y WGKN
Sbjct: 51 VYSWGYGGFGQLGLQNENNY-YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G LG + + + P ++E L G KQ + G AVT G+V +WG G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169
Query: 211 H----GQESSI------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
H QE I L P+ I+ L +K K A G + + E+G+VY
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVY 229
Query: 261 IFGDRAVDKMLF-QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
FG + + + N P LI L ++ G +T G+LYTWG+N NG
Sbjct: 230 TFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQ 289
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS----HGTFS 374
LG P V G S++ + VSCG AA++ +G++ TWG+GG HG S
Sbjct: 290 LGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKS 349
Query: 375 E 375
+
Sbjct: 350 D 350
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 73/281 (25%)
Query: 43 WGNGDYGRLGLGS-------------------LESRWRPVVCSAFEKHSLKALACGGAHT 83
WGN ++G+LG L+ P + K +ACG T
Sbjct: 160 WGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFT 219
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
+ L+E G VY G N +G LG + P I L ++V+IS GY +AIT G+
Sbjct: 220 VVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLN-DIVKISAGYSFCAAITKQGK 278
Query: 144 LYMWGKNSNGQLGLGKKAAKVIP-IPT---------KVEC---LSGIFTKQAAL------ 184
LY WG N NGQLG + + P I T V C T+Q L
Sbjct: 279 LYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFG 338
Query: 185 -------------------GFEQSVA-----------VTGGGKVLSWGAGGSGRLGHGQE 214
F+Q + +T ++ +G G G+LG GQ
Sbjct: 339 GDGQLGHGNKSDLYAPRHVEFKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQN 398
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+ +RS TP L++ +G +V G H+ I +
Sbjct: 399 VASEASIRS----TPNLVQYFKGKQVVDVTCGGEHTIAITQ 435
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
+I++ Q+ WG G G+LG G+ + P K + +ACGG+H F+TE
Sbjct: 321 NFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITE 378
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE----PLRISGLK-KEVVQISTGYHHSSAIT 139
+Y G GQLGI +N+ P + K K+VV ++ G H+ AIT
Sbjct: 379 DNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAIT 434
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 4337 VLQG----KNVRQISAGRCHSAA 4355
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4195 HTLAVSADGSMVWAFGDGDYGKL 4217
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4107 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4165
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4166 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4218
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4219 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4275 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4333
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 4334 VLQG----KNVRQISAGRCHSAA 4352
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4101 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4160
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4161 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4220 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4269
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4270 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4328
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4329 PTLVTVL 4335
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 26/298 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3968 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4023
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4024 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4073
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4074 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4132
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4133 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4191
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4192 HTLAVSADGSMVWAFGDGDYGKL 4214
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 164/351 (46%), Gaps = 37/351 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 44 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG ++P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 163 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------DRAVD 268
L P + + G K+ + A G+ H+ + +G +Y +G +
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGC 319
L A + + IS+ E + GG L + G+LY WG N+ G
Sbjct: 272 DHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQ 331
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
+G+G + SP +V P +E V QV+CGW+HT A++E K + +WG G S
Sbjct: 332 VGVGDNEDHCSPVQVNFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS 381
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 121/271 (44%), Gaps = 34/271 (12%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ VV IS G HS A+ G + WG+ +GQLG G A+ P+PT L+ F
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD--AEDRPVPT---VLTAAFDD- 72
Query: 182 AALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
A G SV + G ++ SWG G GRLGHG S + + P+
Sbjct: 73 -APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV---------FNPQP 122
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
I+ L+GV++ A G H + G V+ +G ++ + P I
Sbjct: 123 IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR 182
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ + G HT +T G+LY WG G LG+G D PE+V + V V+CG
Sbjct: 183 VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV-LVACG 241
Query: 350 WKHTAAI-SEGKILTWGWGG----SHGTFSE 375
W+HT + S G I T+GW HG F +
Sbjct: 242 WRHTITVSSSGSIYTYGWSKYGQLGHGDFED 272
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 17/186 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG + R P S+ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 205 WGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQ 264
Query: 103 LGISEN----IGYSLEPLRISGL-KKEVVQI------STGYHHSS----AITVDGELYMW 147
LG + + + LE L+ + + ++E V++ G+ A+ DG+LY W
Sbjct: 265 LGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGW 324
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQ+G+G P+ + Q A G+ ++A+T V SWG G SG
Sbjct: 325 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVV--QVACGWRHTLALTEAKNVFSWGRGTSG 382
Query: 208 RLGHGQ 213
+LGHG+
Sbjct: 383 QLGHGE 388
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4100
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4101 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4159
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4160 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4212
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4213 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4268
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4269 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4327
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 4328 VLQG----KNVRQISAGRCHSAA 4346
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4095 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4154
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4155 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4214 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4263
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4264 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4322
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4323 PTLVTVL 4329
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3962 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4017
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4018 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4067
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4068 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4126
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4127 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4185
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4186 HTLAVSADGSMVWAFGDGDYGKL 4208
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 4339 VLQG----KNVRQISAGRCHSAA 4357
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTVL 4340
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 26/298 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 592 GKLGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 4339 VLQG----KNVRQISAGRCHSAA 4357
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTVL 4340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4078
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4079 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4137
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4138 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4190
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4191 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4246
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4247 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 4306 V-LQGKNIRQISAGRCHSAA 4324
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4073 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4133 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4191
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4192 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4241
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4242 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4300
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4301 PTLVTVL 4307
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3940 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3995
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3996 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4045
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4046 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4104
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4105 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4163
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4164 HTLAVSADGSMVWAFGDGDYGKL 4186
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4121 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4347
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 4348 VLQG----KNVRQISAGRCHSAA 4366
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4234 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4343 PTLVTVL 4349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4037
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4205
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4206 HTLAVSADGSMVWAFGDGDYGKL 4228
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 168/335 (50%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG ++GQ+G+
Sbjct: 64 GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A I +P ++ LS I Q A G S+A++ + SWG G+LG G E
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S++++ CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ V Q++CG +HT A S G+I ++G GG+
Sbjct: 290 ELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGN 324
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G GQ+
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + +Y WG+N GQLGLG +
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L ++ CG HT + S G +Y++G NG LGIGS SP V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS + + P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEV--NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSN 334
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4116
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+++ +G G+LGLG
Sbjct: 4117 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN 4175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV T G V ++G G G+LG G
Sbjct: 4176 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4228
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4229 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4284
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP + L E+V G HT +TS G++Y WGSN G LG+G + + P +
Sbjct: 4285 -NRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4343
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4344 VLQG----KNIRQISAGRCHSAA 4362
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP L+ +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4111 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGR 4170
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4171 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4230 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4279
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ I G VY +G + ++ NH R
Sbjct: 4280 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVRE 4338
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4339 PTLITVL 4345
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 146/298 (48%), Gaps = 26/298 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3978 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAGAPSFSQ- 4033
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4034 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4083
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4084 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4142
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+T+ G+++T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4143 QMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4201
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4202 HTLAVSTDGSMVWAFGDGDYGKL 4224
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+L++EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P + L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P VE L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4108
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4109 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4167
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4168 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGN----- 4220
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4221 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4276
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4277 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4335
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 4336 VLQG----KNVRQISAGRCHSAA 4354
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S++ ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4103 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4162
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4163 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS 4221
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4222 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4271
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4272 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4330
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4331 PTLVTVL 4337
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3970 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4025
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4026 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4075
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4076 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4134
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4135 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4193
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4194 HTLAVSSDGSMVWAFGDGDYGKL 4216
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4339 VLQG----KNIRQISAGRCHSAA 4357
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 165/334 (49%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G L E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTVL 4340
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KMALSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4197 HTLAVSADGSMVWAFGDGDYGKL 4219
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSM 694
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G A+ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A+ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1722
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1723 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1781
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 1782 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1834
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 1835 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1890
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 1891 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 1949
Query: 336 GPFSESPVDQVSCGWKHTAA 355
V Q+S G H+AA
Sbjct: 1950 V-LQGKNVRQISAGRCHSAA 1968
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 1717 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1776
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 1777 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1835
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 1836 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1885
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 1886 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 1944
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 1945 PTLVTVL 1951
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 1584 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1639
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 1640 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1689
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 1690 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1748
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 1749 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 1807
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 1808 HTLAVSADGSMVWAFGDGDYGKL 1830
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4195 HTLAVSADGSMVWAFGDGDYGKL 4217
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2757
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2758 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2816
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 2817 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2869
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 2870 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2925
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 2926 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 2984
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 2985 VLQG----KNIRQISAGRCHSAA 3003
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2752 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2811
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 2812 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2871 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2920
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 2921 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2979
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 2980 PTLVTVL 2986
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 2619 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 2674
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 2675 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2724
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 2725 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2783
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 2784 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 2842
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 2843 HTLAVSADGSMVWAFGDGDYGKL 2865
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4121 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4347
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4348 VLQG----KNIRQISAGRCHSAA 4366
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4234 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4343 PTLVTVL 4349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4037
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4205
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4206 HTLAVSADGSMVWAFGDGDYGKL 4228
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4195 HTLAVSADGSMVWAFGDGDYGKL 4217
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4195 HTLAVSADGSMVWAFGDGDYGKL 4217
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4195 HTLAVSADGSMVWAFGDGDYGKL 4217
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 166/324 (51%), Gaps = 21/324 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG + ++R PV + + ++ G H+L + G V+A G N GQ
Sbjct: 122 WGNNAYGQLGDDTRDNRTVPVQVTGLS--GVVSVVAGDTHSLAVRSDGSVWAWGRNTSGQ 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P++++GL VV ++ G +HS A+ DG ++ WG N++GQLG +AA
Sbjct: 180 LGDGTRDDRAV-PVQVTGLSG-VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAA 237
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+P +VE +SG+ A G S+AV G V +WG G+LG G+ L
Sbjct: 238 --YPVPWRVEDVSGVVA--VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGK-------LE 286
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S + P+ + L GV +AGF HS + +G V+ +G+ A ++ HA P
Sbjct: 287 GNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPV 344
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ + + V G H+ V+ S G L+ WGSN +G G G++ +P RV G S
Sbjct: 345 QVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPG---LSG 401
Query: 343 VDQVSCGWKHT-AAISEGKILTWG 365
V V+ G H A +S+G + WG
Sbjct: 402 VVSVAAGGGHVLALLSDGTVWAWG 425
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 137/293 (46%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
++A GG H L L G V+A G N GQLG + P ++ L VV ++ G
Sbjct: 404 SVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWV-PRQVPELSG-VVAVAAGSSF 461
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ DG ++ WG N+ GQLG G A +P+ V LS + A G ++AV
Sbjct: 462 SLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPL--HVRELSEVVA--VAAGSMHALAVRA 517
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V WG G+LG G E S Y+P + L G+ V +AA F HS +
Sbjct: 518 DGTVWGWGFNDYGQLGDGFEGI------SARRYSPVQVPGLSGM-VSVAAD-FGHSLAVR 569
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWG 313
+G V+ +G+ D L R L P + ++ GY ++ + + G L+ WG
Sbjct: 570 ADGTVWAWGNN-TDSELGDGTTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWAWG 628
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+N G LG GS P RVQGP S ++ G H+ A+ S+G + WG
Sbjct: 629 TNFAGQLGDGSTTSRAVPVRVQGPVRAS---TLAAGQSHSMAVGSDGFLWAWG 678
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 143/328 (43%), Gaps = 55/328 (16%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L + G V+ TG N GQLG + P+++ GL V ++ G+ HS A+ D
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRR-TPVQVQGLSG-VAAVAAGHGHSLALRYD 116
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+ GQLG + + +P+ +V LSG+ + A G S+AV G V +W
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTVPV--QVTGLSGVVSVVA--GDTHSLAVRSDGSVWAW 172
Query: 202 GAGGSGRLGHG-----------------------------------------QESSILGF 220
G SG+LG G S LG
Sbjct: 173 GRNTSGQLGDGTRDDRAVPVQVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGG 232
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGNHA 278
+ P ++++ GV AAG HS + +G V+ +GD ++ EGN
Sbjct: 233 APEAAYPVPWRVEDVSGVVA--VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSR 290
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L V G YH+ V+ S G ++ WG+N G LG GS SP +V G
Sbjct: 291 WLPKQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVLG-- 348
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWG 365
S V+ G++H+ + S+G + WG
Sbjct: 349 -VSGAVAVAAGYRHSLVVNSDGTLWAWG 375
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 28/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS ++ V E + A+A G H L + G V+ G ND+GQ
Sbjct: 474 WGDNAYGQLGHGSTDAS--SVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQ 531
Query: 103 LGIS-ENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG E I P+++ GL +V ++ + HS A+ DG ++ WG N++ +LG G
Sbjct: 532 LGDGFEGISARRYSPVQVPGLSG-MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTT 590
Query: 161 AAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+++P+ P V LS G+ S+A+ G + +WG +G+LG G
Sbjct: 591 TRRLVPLRVNAPGTVALLSA--------GYNYSMAMRADGSLWAWGTNFAGQLGDGS--- 639
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+TS P ++ V+ AAG HS + +G ++ +G ++
Sbjct: 640 ------TTSRAVP--VRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLT 691
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
H P + + V + + S G L+ WG+N+ G LG
Sbjct: 692 HHALPVRVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN LG G+ R P+ +A ++ L+ G +++ + G ++A G N GQ
Sbjct: 577 WGNNTDSELGDGTTTRRLVPLRVNA--PGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQ 634
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+R+ G + ++ G HS A+ DG L+ WG N GQLG G
Sbjct: 635 LGDGSTTSRAV-PVRVQGPVRAST-LAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTH 692
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ +V +SG+ L S+AV G + +WG G+LG + + +R
Sbjct: 693 HALPV--RVPGMSGVVAVDVTLNL--SLAVRSDGSLWAWGNNDVGQLGTQPSTYVTTAVR 748
Query: 223 ST 224
S+
Sbjct: 749 SS 750
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP + L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4338 VLQG----KNIRQISAGRCHSAA 4356
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTVL 4339
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4196 HTLAVSADGSMVWAFGDGDYGKL 4218
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 169/334 (50%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E V C F+K S ++ +ACG +T+ +T G +Y+ G ND+
Sbjct: 36 WGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDY 95
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +++ G +H+ A+ G+L+ WG NS GQLGL
Sbjct: 96 GQLG-HERGRKRLQ--LILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNS 152
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K P V+ L Q A G + ++A+T G++ SWG+ G+LG G +
Sbjct: 153 KNFMECS-PRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR--- 208
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
SE P+LI L GV + A G HS I ++G ++ +G ++ + +
Sbjct: 209 -----SEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRN 263
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L ++ CG + LT G ++T G+ G LG GS + P +V
Sbjct: 264 LPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVM-E 322
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q+SCG +HT A+ S+G++ WG GG+
Sbjct: 323 LMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 356
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 16/298 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG R R + + K +ACG HT+ + E G +++ G N GQL
Sbjct: 91 GNNDYGQLG--HERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQL 148
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L +VQ++ G H+ A+T +GELY WG NS GQLGLG
Sbjct: 149 GLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 208
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P + L+G+ A G S+A++ G + WG G+LG
Sbjct: 209 SEVK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 258
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L K+ AA G S + +G V+ G ++ N+ P
Sbjct: 259 TQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 318
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ +L S ++ CG HT L S G +Y WG G LG S + +P+ V GP
Sbjct: 319 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVHGP 376
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G+++ WG +G+LGLG ++I +P +V+ +Q A G +V +T GK+ S
Sbjct: 31 GDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSC 90
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGH + L +LI L+ K A G H+ ++E G+++
Sbjct: 91 GNNDYGQLGHERGRKRL-----------QLILGLDAFVFKKVACGAYHTIAVNEWGQLFS 139
Query: 262 FGDRAVDKMLFQEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENG 318
+G + ++ N P ++ L S +V CG H LT+ GELY+WGSN G
Sbjct: 140 WGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEG 199
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LG+G ++ + P+ ++CG H+ AIS+ G I WG
Sbjct: 200 QLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWG 247
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL ++R P + ACG ++FLT G V+ G +GQ
Sbjct: 246 WGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKKA 161
LG N L + + V QIS G H+ A+ G +Y WG GQ LG +
Sbjct: 306 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQ--LGNNS 363
Query: 162 AKVIPIPTKV 171
+ IP P V
Sbjct: 364 TRSIPTPQVV 373
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 170/333 (51%), Gaps = 28/333 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA ++H + ++ CG HT+ +++ VY+ G DFG
Sbjct: 35 WGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFG 94
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L ++ QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 95 RLG-HGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNT 153
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + W G + G + L F
Sbjct: 154 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWKFGISDRNDRL-F 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L+ EY +++++G ++ + L S +Y++ ++ ++ G
Sbjct: 210 LK---EYLC-CVRDVDGAVMQPHISFLLWSI-------IYLWMEQIWPTRTWRLGG---S 255
Query: 281 PSLISKLPYSEEV----VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P ++ S + GG+ HT LTS G+LY WG N+ G +G+G+ SP +V+
Sbjct: 256 PCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVR 315
Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
P + V QVSCGW+HT A++E + WG G
Sbjct: 316 FP-DDQKVVQVSCGWRHTLAVTERNNVFAWGRG 347
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 64/257 (24%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ PT++ L
Sbjct: 6 VTPPPRKVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGD--AEDRSSPTQLSALDEH 63
Query: 178 FTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
G + +VA + +V SWG G GRLGHG S + +TP IK L
Sbjct: 64 QIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALH 114
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
GV + +++ CG
Sbjct: 115 GVMI--------------------------------------------------KQIACG 124
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
H +T GE+ +WG N+NG LG+G+ + P+++Q F + V+ G +HTAA+
Sbjct: 125 DSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAV 183
Query: 357 SEGKILTWGWGGSHGTF 373
+E L +GW G F
Sbjct: 184 TEDGDL-YGWDGKIWKF 199
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 104/261 (39%), Gaps = 64/261 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AFE +K +A G HT +TE G +Y +
Sbjct: 140 WGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWK 198
Query: 103 LGISE------------------------NIGYSL---------------------EPLR 117
GIS+ +I + L P
Sbjct: 199 FGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCF 258
Query: 118 ISGLKKEVV----QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
++ K+ QIS G+ H+ +T DG+LY WG N GQ+G+G + P+ +
Sbjct: 259 LTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 318
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ Q + G+ ++AVT V +WG G +G+LG G+ S +P +I
Sbjct: 319 DQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE---------SLDRNSPNII- 366
Query: 234 ELEGVKVKIAAAGFLHSACID 254
E + V A+ + S+ D
Sbjct: 367 --EALSVDGASGQHIESSSFD 385
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 158/325 (48%), Gaps = 19/325 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S ++ +A GG HT LT +G V+ G N+ GQ
Sbjct: 435 WGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGVWCWGRNNSGQ 493
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I Y + P+ +SGL V I+ G +H+ A+T G ++ WG N +GQLG G
Sbjct: 494 LGDGSTI-YHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTD 552
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+ T AA F + A+T G V WGA G+LG G
Sbjct: 553 RSTPV--AVSGLTSGVTVIAAGRF-HTCALTSSGGVWCWGANFDGQLGDGT--------- 600
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L IAA G+ H+ + +G V+ +GD ++ + P
Sbjct: 601 TTNRTTPVAVSGLPSGVTAIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 659
Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+S LP + G+ HTC LTS GE++ WG N G LG G+ +P V G S
Sbjct: 660 AVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSG--LPS 717
Query: 342 PVDQVSCGWKHTAAIS-EGKILTWG 365
V ++ G HT A++ G ++ WG
Sbjct: 718 GVTAIAAGVYHTCALTGSGGVMCWG 742
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 153/325 (47%), Gaps = 18/325 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R PV S + A+A GG HT LT +G V+ G N +GQ
Sbjct: 179 WGDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSGEVWCWGYNYYGQ 237
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P + GL + I+ G H+ A+ G ++ WG+N +GQLG G
Sbjct: 238 LGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTD 297
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ V L T AA G + A+TG G+V WG G G+LG G
Sbjct: 298 SSTPV--AVSGLPSGVTAIAA-GDYHTCALTGSGEVWCWGGNGFGQLGDGT--------- 345
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V+ AAG H+ + +G V+ +G ++ P+
Sbjct: 346 TTARSTPAAVSGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPA 404
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+S LP + GG HTC L S G ++ WG N +G LG GS +P V G S
Sbjct: 405 AVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSG--LAS 462
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWG 365
V+ ++ G HT A+ S G + WG
Sbjct: 463 GVETIAAGGWHTCALTSSGGVWCWG 487
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 150/325 (46%), Gaps = 18/325 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ +R P S + A+A G HT LT +G V G N GQ
Sbjct: 77 WGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSGGVRCWGANYSGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S P +SGL V I+ G H+ A+ G + WG N GQLG G
Sbjct: 136 LGNGLTFGRS-TPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTN 194
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G+V WG G+LG G + + R
Sbjct: 195 RRTPV--AVSGLPSGVTAIAAGGL-HTCALTGSGEVWCWGYNYYGQLGDGTTT----YSR 247
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S TP + L IAA G LH+ + +G V+ +G ++ + P
Sbjct: 248 S----TPAAVGGLPSGMTAIAAGG-LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPV 302
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+S LP + G YHTC LT GE++ WG N G LG G+ +P V G S
Sbjct: 303 AVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSG--LPS 360
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWG 365
V+ ++ G HT A+ S G + WG
Sbjct: 361 GVETIAAGDYHTCALMSSGGVWCWG 385
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S + A+A G HT LT +G V+ G N GQ
Sbjct: 486 WGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGYNLSGQ 544
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+T G ++ WG N +GQLG G
Sbjct: 545 LGDGTTTDRS-TPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTN 603
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G+ + A+T G+V WG G+LG G
Sbjct: 604 RTTPV--AVSGLPSGVTAIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGT--------- 651
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V AAG+ H+ + +G V+ +GD ++ + P
Sbjct: 652 TTNRSTPGAVSGLP-SGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 710
Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + G YHTC LT G + WG+N +G LG G
Sbjct: 711 AVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG 752
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 147/312 (47%), Gaps = 30/312 (9%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A GGAHT LT +G V G NDFGQLG S P +SGL
Sbjct: 47 SSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRS-TPGAVSGLPSG 105
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
V I+ G +H+ A+T G + WG N +GQLG G + P +P+ V +
Sbjct: 106 VTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAI----- 160
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G + + A+ G V+ WG G+LG G +T+ TP + L
Sbjct: 161 ---AAGGDHTCALMSSGGVMCWGDNYYGQLGDGT---------TTNRRTPVAVSGLPSGV 208
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYS-EEVVCGG 297
IAA G LH+ + +G V+ +G ++ ++R P+ + LP + GG
Sbjct: 209 TAIAAGG-LHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGG 267
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
HTC L S G ++ WG N++G LG GS +P V G S V ++ G HT A++
Sbjct: 268 LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSG--LPSGVTAIAAGDYHTCALT 325
Query: 358 EGKILTWGWGGS 369
G W WGG+
Sbjct: 326 -GSGEVWCWGGN 336
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 20/201 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A GG HT LT +G V+ G N +GQ
Sbjct: 588 WGANFDGQLGDGTTTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQ 646
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G+ H+ A+T GE++ WG N GQLG G
Sbjct: 647 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTN 705
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ---E 214
+ P +P+ V + A G + A+TG G V+ WG G G+LG G+
Sbjct: 706 RSTPGAVSGLPSGVTAI--------AAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYR 757
Query: 215 SSILGFLRSTS--EYTPRLIK 233
++ + + S S Y P +I+
Sbjct: 758 TTPVDVVTSASWGVYLPMIIR 778
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 162/325 (49%), Gaps = 21/325 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + SA + + L H+L LTE+G V++ G D+
Sbjct: 1046 GEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDY 1105
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+QI+ G+ HS+ +TVDG+L +G G+LGLG
Sbjct: 1106 GKLG-HGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGT 1164
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ P +V+ L A G +V V+ G ++G G G+LG G S+
Sbjct: 1165 VCNR--KTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSA-- 1220
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
+ TP I+ L G+KVK A G S + +G V +G DR + + Q H
Sbjct: 1221 -------KSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGH 1273
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P ++ L + EEVV G HT LTS G ++ WG N +G LG+G + P+ +
Sbjct: 1274 CT-PQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLG 1332
Query: 336 GPFSESPVDQVSCGWKHTAAISEGK 360
G S P+ Q+S G H+AA S K
Sbjct: 1333 GLGSSEPIKQISAGRTHSAAWSGAK 1357
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 14/253 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + +ACG H+ +T G + G D+G+
Sbjct: 1100 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGR 1159
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ + P R+ L+ + ++ G +H+ ++ DG + +G G+LGLG
Sbjct: 1160 LGLG-TVCNRKTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNT 1218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+AK P+ K+E LSG+ K+ A G + SVA+T G VL+W G RL E+ + G
Sbjct: 1219 SAKSTPV--KIEALSGLKVKKVACGTQFSVALTRDGFVLTW---GQDRLIGQTEAQMRG- 1272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP+ + L G ++ G H+ + +G V+ +G A ++ R
Sbjct: 1273 -----HCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVRE 1327
Query: 281 PSLISKLPYSEEV 293
P L+ L SE +
Sbjct: 1328 PQLLGGLGSSEPI 1340
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 20/230 (8%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ Y+WG +GQL +A + + P S +Q G + + G VL+ G
Sbjct: 992 DAYLWGGGRHGQLC---EAGRSVLTPLHTSSFSS--AQQIICGQNCTFVIQANGTVLACG 1046
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + ++ ++ L+G V + + G HS + E+G V
Sbjct: 1047 EGSYGRLGQGNSDDL---------HSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEV 1097
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD K+ + RRP I L E ++ CG H+ V+T G+L T+G+ +
Sbjct: 1098 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDY 1157
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
G LG+G++ +PERV+ + V+CG HT +S TW +G
Sbjct: 1158 GRLGLGTVCNRKTPERVKA-LENYHIGHVACGLNHTVCVSADGSTTWAFG 1206
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 168/335 (50%), Gaps = 22/335 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG ++GQ+G+
Sbjct: 64 GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A I +P ++ LS I Q A G S+A++ + SWG G+LG G E
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S++++ CG HT LT G ++T+G+ G LG S +P +V
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV-F 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ V Q++CG +HT A S G+I ++G GG+
Sbjct: 290 ELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGN 324
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 143/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G GQ+
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + +Y WG+N GQLGLG +
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286
Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L ++ CG HT S G +Y++G NG LGIGS SP V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS + + P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEV--NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSN 334
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 266
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 267 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 325
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 326 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 378
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 379 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 434
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 435 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 493
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 494 V-LQGKNIRQISAGRCHSAA 512
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 261 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 320
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 321 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 380 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 429
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 430 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 488
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 489 PTLVTVL 495
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 128 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 183
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 184 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 233
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 234 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 292
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 293 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 351
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 352 HTLAVSADGSMVWAFGDGDYGKL 374
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4115
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4116 GKLG-HGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4175 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4227
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4228 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4283
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E+V G HT L S G++Y WGSN G LG+G + + P +
Sbjct: 4284 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4342
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4343 VLQG----KNIRQISAGRCHSAA 4361
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4110 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4169
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4170 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4229 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4279 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4337
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4338 PTLITVL 4344
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3977 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 4032
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4033 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4082
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEV+
Sbjct: 4083 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4141
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4142 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4200
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4201 HTLAVSADGSMVWAFGDGDYGKL 4223
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA+SE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 164/340 (48%), Gaps = 25/340 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV ++ ALA GG+H+L LT+TG V A G N GQ
Sbjct: 62 WGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQ 121
Query: 103 LGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+ + GL + ++ G HS A+T G + WG NSNGQLG G
Sbjct: 122 LGDGTTTDRS-TPVTV-GLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ P+ + + I A+ S+A+T G L+WG+ G+LG G
Sbjct: 180 TARSTPVTVGLPAGTTITALAAS---TYSLALTDTGAALAWGSNSRGQLGDGT------- 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + G + AA + HS + + G V +G + ++ +G R
Sbjct: 230 --TTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQL--GDGTTTNR 285
Query: 281 PSLISK-LPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ ++ LP + G HT VLTS G + WGSN NG LG G+ +P V
Sbjct: 286 STPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGL 345
Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
P + + ++ G+ H+ A+++ G +L WG G S+G +
Sbjct: 346 PAGTT-ITALAAGYYHSLALTDTGAVLAWG-GNSYGQLGD 383
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 131/299 (43%), Gaps = 18/299 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV ++ ALA G H+L LT+TG V A G N GQ
Sbjct: 114 WGSNSRGQLGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQ 173
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + + +S A+T G WG NS GQLG G
Sbjct: 174 LGDGTTTARS-TPVTVGLPAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTD 232
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V +G A ++ S+A+T G VL+WG+ +G+LG G
Sbjct: 233 RSTPV--TVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGT--------- 281
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + G + AAG H+ + G V +G + ++ +G R +
Sbjct: 282 TTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQL--GDGTTTDRST 339
Query: 283 LISK-LPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
++ LP + G YH+ LT G + WG N G LG G+ +P V P
Sbjct: 340 PVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGTTTDRSTPVTVGLP 398
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 35 LQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L AAL WG+ G+LG G+ R PV S ++ ALA H+L LT+TG V
Sbjct: 208 LTDTGAALAWGSNSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVL 267
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNS 151
A G N GQLG S P+ + GL + ++ G H+ +T G + WG NS
Sbjct: 268 AWGSNSNGQLGDGTTTNRS-TPVTV-GLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNS 325
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLG G + P+ V +G A G+ S+A+T G VL+WG G+LG
Sbjct: 326 NGQLGDGTTTDRSTPV--TVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGD 383
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +T TP + G + + + +D +G + + +
Sbjct: 384 GT---------TTDRSTPVTVGLPAGTTITVLVS-------MDNHGMALVAPPTSTTTLQ 427
Query: 272 FQEGNHA 278
N A
Sbjct: 428 VTPANPA 434
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
VL+WG SG+LG G +T+ TP + G + AAG HS + +
Sbjct: 58 TVLAWGDNFSGQLGDGT---------TTARSTPVTVGLPAGTTITALAAGGSHSLALTDT 108
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEEVV---CGGYHTCVLTSGGELYTW 312
G V +G + ++ +G R + ++ LP + G H+ LT G + W
Sbjct: 109 GVVLAWGSNSRGQL--GDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAW 166
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
GSN NG LG G+ +P V P + + ++ A G L WG
Sbjct: 167 GSNSNGQLGDGTTTARSTPVTVGLPAGTT-ITALAASTYSLALTDTGAALAWG 218
>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 424
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 194/396 (48%), Gaps = 34/396 (8%)
Query: 9 MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLG-LGSLE---------S 58
M YY K++I + + S +R WGN D G G L S E S
Sbjct: 1 MFSYYGKKNILFIRFIYHNRYSYKSKGRRSIVYAWGNSDGGWTGHLPSEEYEDHVSGATS 60
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEP 115
+RP + ++ + S++ +ACG TLF+T+ G VY++G+ +GQLG + E G +L
Sbjct: 61 VYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL-- 118
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
I + ++V+ + G HS +T G LY G G+LGLG ++ + P VE L+
Sbjct: 119 --IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESLA 175
Query: 176 GIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSEY 227
K + A G S+A++ GKV S+G+ G LGHG+ + FL E
Sbjct: 176 REEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNMET 234
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+PRLI+ LE +++ + G H+ I++ G + +G + +P + L
Sbjct: 235 SPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHL 294
Query: 288 PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF---SESPV 343
P +++V GG HT LT GG+++ WG N GCLG+G R+ ++ P+
Sbjct: 295 PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPI 354
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSED 376
++ GW + A+ SEG + +WG G G+ GT E+
Sbjct: 355 QWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEE 390
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQ-IS 129
K + GGAHTL LT+ G V+A G+N FG LG+ E EP + L KE +Q I+
Sbjct: 299 KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIA 358
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G+ S A+ +G +Y WG+ G LG G++ K P+ + E + + GF +
Sbjct: 359 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 418
Query: 190 VAV 192
+AV
Sbjct: 419 IAV 421
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Nomascus leucogenys]
Length = 4855
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + R +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHGNS-----DRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT 4165
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILG 219
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4166 SNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN------ 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHA 278
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4218 ---STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH- 4273
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
RP I L E+V G HT L S G++Y WGSN G LG+G + + P V G
Sbjct: 4274 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4333
Query: 337 PFSESPVDQVSCGWKHTAA 355
V Q+S G H+AA
Sbjct: 4334 -LQGKNVRQISAGRCHSAA 4351
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4159
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4160 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4219 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4268
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4269 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4327
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4328 PTLVTGL 4334
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 22/215 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
+GNGDYGRLGLG+ ++ P +A E + + +ACG HTL ++ G V+A G D+G
Sbjct: 4152 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4211
Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+LG+ + S P +I G+KK ++ G S A+T DG +Y +G++ +G
Sbjct: 4212 KLGLGNSTAKS-SPQKIDVLCGIGIKK----VACGTQFSVALTKDGHVYTFGQDR--LIG 4264
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + A+ P ++ L+G+ + A+G E ++A+ G V +WG+ G+LG G +
Sbjct: 4265 LPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNH 4324
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ P L+ L+G V+ +AG HSA
Sbjct: 4325 V---------REPTLVTGLQGKNVRQISAGRCHSA 4350
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX------QGEEVV 4131
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4132 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4190
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4191 HTLAVSADGSMVWAFGDGDYGKL 4213
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 174/339 (51%), Gaps = 26/339 (7%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ G+LG+ ++ ++ R V C ++ +L ACG H+L L G V++ G N
Sbjct: 5 WGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNN 64
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG + P +I L+ +++V +S G HS AI +G ++ WG S+GQLG+
Sbjct: 65 SCGQLGRKRCQKHG-RPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGI 123
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K+ IP K++ LS Q + G S+A+ G+V SWG G+LG G+
Sbjct: 124 -REFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVP- 181
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF----Q 273
S+ +P+ +K L+G+ + AAG HS + +G Y +G ++ +
Sbjct: 182 -------SQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKE 234
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+P I +L + + CG HT VLT G+++T+GSN++G LG I + P
Sbjct: 235 SAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGP 294
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS--EGKILTWGWGG 368
+ V S S Q++CG HT A S G+++++G G
Sbjct: 295 QVVDSAVSFS---QIACGSYHTLAYSCTTGQVISFGCGS 330
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 25/237 (10%)
Query: 145 YMWGKNSNGQLGL-GKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKV 198
Y WG NS+GQLG+ AK V C G QAA G S+ + G V
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKA----RAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTV 58
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
S G G+LG R P I+ LE + + G HS I + GR
Sbjct: 59 WSCGNNSCGQLGRK---------RCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGR 109
Query: 259 VYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G + ++ +E + P I +L + +V CG YH+ L G +++WG N
Sbjct: 110 VFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKN 169
Query: 316 ENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
+G LG+G ++ SP+ V+ P+ QV+ G H+ A+S ++GWG ++
Sbjct: 170 NHGQLGLGENVPSQASPQWVKS-LDGIPLAQVAAGGAHSFALSFSGT-SYGWGRNNA 224
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
AA G HS + +G V+ G+ + ++ + RP+ I L + V CG H+
Sbjct: 42 AACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHS 101
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
+ G +++WGS +G LGI L S + S + QVSCG H+ A++ +G
Sbjct: 102 LAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDG 161
Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
++ +WG ++ H GQL G+ PS+
Sbjct: 162 RVFSWG---------KNNH---GQLGLGENVPSQ 183
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4040
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4041 GKLG-HGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4099
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4100 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4152
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4153 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4208
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP I L E++ G HT L S G++Y WGSN G LG+G + + P +
Sbjct: 4209 -NRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4267
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG + Q+S G H+AA
Sbjct: 4268 ILQG----KNIRQISAGRCHSAA 4286
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4035 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4094
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4095 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4153
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4154 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4203
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4204 -RARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4262
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4263 PTLITIL 4269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 23/263 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3902 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 3957
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3958 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4007
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEV+
Sbjct: 4008 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4066
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + QV+CG
Sbjct: 4067 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4125
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 4126 HTLAVSADGSMVWAFGDGDYGKL 4148
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 164/332 (49%), Gaps = 30/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + P V A H + +ACG HT +T+ G V G + GQ
Sbjct: 94 WGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQ 153
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + SL P +S L E + QI+ G H+ A++V+GE+Y WG ++GQLG+GK
Sbjct: 154 LGQGDWTS-SLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQ 212
Query: 162 AKV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P KV + A G +A+T ++ SWG G GRLG G
Sbjct: 213 EETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGD------ 266
Query: 220 FLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGD---------RAVDK 269
S S ++P +++ +E +++ AAG H+A + +NG ++ G A +
Sbjct: 267 ---SESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQ 323
Query: 270 MLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ ++ R L+ + + CG HT V+++ GE++ WG+ E+G LG G
Sbjct: 324 LTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGG 383
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ +SP V+ V VSCG H+AA+
Sbjct: 384 TEGANSP--VELTSLRGLVGDVSCGLVHSAAV 413
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 138/321 (42%), Gaps = 51/321 (15%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS----------------TGYHHSSAIT 139
G +FG+LG + + LEP R+ K+ V +S G HH+ A+T
Sbjct: 28 GWGEFGRLGHGDTLS-QLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVT 86
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DGE+ WG + GQLG G + +P K LS A G+ + VT G V+
Sbjct: 87 EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKA--LSNHRVCGVACGYYHTAVVTDVGLVM 144
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
WG G SG+LG G TS PR + L K++ A G H+ + NG +
Sbjct: 145 CWGKGNSGQLGQGD---------WTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEI 195
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEE-----VVCGGYHTCVLTSGGELYT 311
Y +G A ++ G H + ++ K+ EE + CG H +T L++
Sbjct: 196 YSWGAGADGQLGV--GKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFS 253
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
WG +G LG+G + SP V+ + V+ G HTA +S+ G+I T G G
Sbjct: 254 WGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRG--- 310
Query: 371 GTFSEDGHSSGGQLDRGQLTP 391
S GQL G P
Sbjct: 311 ---------SYGQLGHGDADP 322
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 32/194 (16%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLR--------STSEYTPRLIKELEGVKVKIAAA 245
GG + G G GRLGHG S L R + +T + L G + +A
Sbjct: 20 GGKRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGA-IYVACG 78
Query: 246 GFLHSACIDENGRVYIFG---------DRAVDKMLFQEGNHARRPSLISKLPYSEE--VV 294
G H+ + E+G V +G A D+ + P+++ L V
Sbjct: 79 GH-HTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTV---------PAVVKALSNHRVCGVA 128
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CG YHT V+T G + WG +G LG G P V ++E + Q++CG HT
Sbjct: 129 CGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEK-IRQIACGMAHTL 187
Query: 355 AIS-EGKILTWGWG 367
A+S G+I +WG G
Sbjct: 188 ALSVNGEIYSWGAG 201
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 25/340 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G L PV + A+A G +HTL + + G V++ G N +GQ
Sbjct: 999 WGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQ 1058
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P+++ GL V IS G H+ A+ DG ++ WG+NS GQLG G
Sbjct: 1059 LG-DGTTAQSLTPVQVQGLTG-VTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTH 1116
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 1117 RATPV--QVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLGDG---------T 1163
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T TP ++ L GV + IAA G LH+ + ++G V+ +G + ++ +G RR
Sbjct: 1164 TTHRATPVQVQGLTGV-IAIAA-GSLHTVALRQDGTVWAWGFNDLGQL--GDGTTTRRLT 1219
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P+ + L + G +HT + G +TWG N G LG G+ +P +VQG
Sbjct: 1220 PAQVQGLTGVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQG---L 1276
Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
+ V ++ G+ HT + E + W WG + GT +G S+
Sbjct: 1277 TGVSALAAGYAHTVVVGEDGTV-WAWGNNSGTQLGNGSST 1315
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 29/340 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G L R PV S+ A+A GG H + G ++ GLN +GQ
Sbjct: 949 WGLNSYGQLGGGPLSYRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 1006
Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL P+++ GL V I+ G+ H+ A+ DG ++ WG N+ GQLG G
Sbjct: 1007 LG-GGPLSQSLTPVQVQVQGLTG-VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTT 1064
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P+ +V+ L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 1065 AQSLTPV--QVQGLTGVTAISA--GDAHTVALRRDGTVWAWGRNSWGQLGDG-------- 1112
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP ++ L GV + IAA G LH+ + ++G V+ +G + ++ H
Sbjct: 1113 -TTTHRATPVQVQGLTGV-IAIAA-GSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRAT 1169
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + L + G HT L G ++ WG N+ G LG G+ +P +VQG
Sbjct: 1170 PVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQG---L 1226
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG---WGG-SHGTFSE 375
+ V ++ G+ HTAA+ +G TWG WG GTF++
Sbjct: 1227 TGVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTD 1266
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 25/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D G+LG G+ R+ PV A+A G HT+ ++ G V+ G N GQ
Sbjct: 97 WGNNDDGQLGDGTTTRRFSPVQV----MTGATAIAAGIYHTVAASQDGTVWTWGRNSSGQ 152
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +I P+++ GL V ++ G +HS+A+ G ++ WG N GQLG G
Sbjct: 153 LGDGTSI-QRFSPVQVQGLTG-VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQ 210
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+G+ A ++VA+ G V +WG SG+LG G
Sbjct: 211 RLTPV--QVQGLTGVIAISA--NDSETVALRQDGTVWAWGNNSSGQLGDG---------T 257
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +TP + L GV A GF + + ++G ++ +G + ++ + RP
Sbjct: 258 TTVRFTPVQVLGLTGVTAIAAGGGF--AVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPE 315
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + G HT L G L+ WG+N +G LG G+ V +P +VQG +
Sbjct: 316 QVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQG---LTG 372
Query: 343 VDQVSCGWKHT-AAISEGKILTWG 365
V ++ G+ +T A+ +G + WG
Sbjct: 373 VTAIAAGYLYTVASKQDGTVWAWG 396
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 156/330 (47%), Gaps = 33/330 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ PV + A++ G AHT+ L G V+A G N +GQ
Sbjct: 1051 WGGNAYGQLGDGTTAQSLTPVQVQGLT--GVTAISAGDAHTVALRRDGTVWAWGRNSWGQ 1108
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL V+ I+ G H+ A+ DG ++ WG+NS GQLG G
Sbjct: 1109 LGDGTTT-HRATPVQVQGLTG-VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTH 1166
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 1167 RATPV--QVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGFNDLGQLGDG---------T 1213
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T TP ++ L GV AAG+ H+A + ++G + +G ++ +G R
Sbjct: 1214 TTRRLTPAQVQGLTGVTT--IAAGYFHTAAVRQDGTAWTWGFNLWGQL--GDGTFTDRAT 1269
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GP 337
P + L + G HT V+ G ++ WG+N LG GS +P +V+ G
Sbjct: 1270 PVQVQGLTGVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEALTGA 1329
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWG 367
FS ++ G HT A+S WGWG
Sbjct: 1330 FS------LAAGRFHTVAMSPDGA-GWGWG 1352
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 156/335 (46%), Gaps = 19/335 (5%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q R WG+ +G+LG G+ R PV + A+A GG H + G ++
Sbjct: 738 QDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMD--VTAMAAGGYHMAAAGQDGTLWTW 795
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GLN +GQLG + Y L P+++ GL I+ G H+ A+ DG ++ WG N +GQ
Sbjct: 796 GLNSYGQLG-GGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A + P+ +V+ L + T AA G+ + A G + +WG G+LG G
Sbjct: 855 LGDGTTAQSLTPVQVQVQGLMDV-TAMAAGGYHMAAAGQ-DGTLWTWGLNSYGQLGGGPL 912
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S L P ++ L + V AAG H A ++G ++ +G + ++
Sbjct: 913 SYRL---------LPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGP 961
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
++ P + L + GGYH G L+TWG N G LG G + +P +V
Sbjct: 962 LSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQV 1021
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
Q + V ++ G+ HT A+ + + W WGG+
Sbjct: 1022 Q-VQGLTGVAAIAAGFSHTLAVRQDGTV-WSWGGN 1054
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 137/292 (46%), Gaps = 19/292 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV + A+A G HT+ L + G V+A G N +GQ
Sbjct: 1101 WGRNSWGQLGDGTTTHRATPVQVQGLT--GVIAIAAGSLHTVALRQDGTVWAWGRNSWGQ 1158
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL V+ I+ G H+ A+ DG ++ WG N GQLG G
Sbjct: 1159 LGDGTTT-HRATPVQVQGLTG-VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTR 1216
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V+ L+G+ T A G+ + AV G +WG G+LG G
Sbjct: 1217 RLTP--AQVQGLTGVTT--IAAGYFHTAAVRQDGTAWTWGFNLWGQLGDG---------T 1263
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP ++ L GV AAG+ H+ + E+G V+ +G+ + ++ P
Sbjct: 1264 FTDRATPVQVQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPV 1321
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ L + + G +HT ++ G + WG N G +G G+ +P V
Sbjct: 1322 QVEALTGAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTPVNV 1373
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 27/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +RP + A+A G HT+ L + G ++A G N GQ
Sbjct: 295 WGSNSRGQLGNGTTFGSYRPEQVQGLT--GVTAIAASGIHTVALRQDGTLWAWGNNSSGQ 352
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+++ GL V I+ GY ++ A DG ++ WG N GQLG G
Sbjct: 353 LGDGTTT-VRFTPVQVQGLTG-VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTR 410
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+G+ A G+ +VA G V +WG +LG G S
Sbjct: 411 RLTPV--QVQGLTGV--TAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVS------- 459
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+TP ++ LEG+ IAA+ L + + ++G V+ +GD A ++ +G RR
Sbjct: 460 --QRHTPGEVQGLEGIT-AIAASNLL-TVAVRQDGTVWAWGDNARGQL--GDGTTTRRLT 513
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + L V YH + G ++ WG G LG G+ +P +VQG
Sbjct: 514 PVQVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQG---L 570
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
+ V ++ G HT A+ +G + WG
Sbjct: 571 TGVTAIAAGSNHTVALRQDGTVWAWG 596
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ ++G+LG G+ R PV + A+A G +T+ + G V+A G N Q
Sbjct: 395 WGDNEWGQLGDGTTTRRLTPVQVQGLT--GVTAIAAGYLYTVASKQDGTVWAWGDNKRSQ 452
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P + GL+ + I+ + A+ DG ++ WG N+ GQLG G
Sbjct: 453 LG-EGAVSQRHTPGEVQGLEG-ITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTR 510
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+G+ T AA + VAV G V +WG G G+LG G G R
Sbjct: 511 RLTPV--QVQGLAGV-TAVAASDYHL-VAVRQDGTVWAWGVGFWGQLGDG-----TGMDR 561
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST P ++ L GV AAG H+ + ++G V+ +G ++ P
Sbjct: 562 ST----PVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPV 615
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ + + + GG HT L G ++TWG N G LG G+ HSP +VQG +
Sbjct: 616 QVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQG---LAD 672
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
V ++ HT A+ +G + TWG
Sbjct: 673 VIAIATNNGHTVAVRQDGTVWTWG 696
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 153/329 (46%), Gaps = 38/329 (11%)
Query: 65 CSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
+AF + LA G G HTL + + G V+A G ND GQLG P+++
Sbjct: 66 ANAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTT-RRFSPVQV---MT 121
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
I+ G +H+ A + DG ++ WG+NS+GQLG G + P+ +V+ L+G+ A
Sbjct: 122 GATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPV--QVQGLTGV--TAVA 177
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G S A+ GG V +WG G+LG G ST TP ++ L GV + I+
Sbjct: 178 AGRNHSAALGQGGTVWTWGDNLVGQLGDG---------TSTQRLTPVQVQGLTGV-IAIS 227
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTC 301
A + + ++G V+ +G+ + ++ +G R P + L + GG
Sbjct: 228 ANDS-ETVALRQDGTVWAWGNNSSGQL--GDGTTTVRFTPVQVLGLTGVTAIAAGGGFAV 284
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
L G L+ WGSN G LG G+ + PE+VQG + V ++ HT A+ +
Sbjct: 285 ALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQG---LTGVTAIAASGIHTVALRQDGT 341
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
L W W G++S GQL G T
Sbjct: 342 L-WAW----------GNNSSGQLGDGTTT 359
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 23/326 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG G+ PV A+A GG+HT+ L + G V+ G N +GQ
Sbjct: 595 WGFNNYGQLGDGTTAGHLTPVQVPGVT--GAVAIAAGGSHTVALLQDGTVWTWGYNIWGQ 652
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL +V+ I+T H+ A+ DG ++ WG NS+GQLG G
Sbjct: 653 LGDGTTT-HRHSPVQVQGLA-DVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQ 710
Query: 163 KVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ + + I T + Q+VA+ + +WG G+LG G
Sbjct: 711 RLTPVQVHGLTDATAILTSSS-----QTVAMRQDRTLWAWGDNHWGQLGDG--------- 756
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP ++ L + V AAG H A ++G ++ +G + ++ ++ P
Sbjct: 757 TTTRRLTPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP 814
Query: 282 SLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
+ L + + G HT + G ++ WGSN +G LG G+ +P +VQ
Sbjct: 815 VQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGL 874
Query: 340 ESPVDQVSCGWKHTAAISEGKILTWG 365
+ G+ AA +G + TWG
Sbjct: 875 MDVTAMAAGGYHMAAAGQDGTLWTWG 900
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 157/376 (41%), Gaps = 71/376 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-----------EKHS------------------- 72
WG YG+LG G L R PV + H+
Sbjct: 795 WGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854
Query: 73 ----------------------LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG 110
+ A+A GG H + G ++ GLN +GQLG +
Sbjct: 855 LGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG-GGPLS 913
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
Y L P+++ GL +V ++ G +H +A DG L+ WG NS GQLG G + +++P+ +
Sbjct: 914 YRLLPVQVQGL-MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPV--Q 970
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V+ L + T AA G+ + A G + +WG G+LG G S L TP
Sbjct: 971 VQGLMSV-TAMAAGGYHMAAAGQ-DGTLWTWGLNSYGQLGGGPLSQSL---------TPV 1019
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
++ V AAGF H+ + ++G V+ +G A ++ + P + L
Sbjct: 1020 QVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGV 1079
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+ G HT L G ++ WG N G LG G+ +P +VQG + V ++ G
Sbjct: 1080 TAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQG---LTGVIAIAAGS 1136
Query: 351 KHTAAI-SEGKILTWG 365
HT A+ +G + WG
Sbjct: 1137 LHTVALRQDGTVWAWG 1152
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WG +G+LG G+ R PV + ALA G AHT+ + E G V+A
Sbjct: 1244 QDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLT--GVSALAAGYAHTVVVGEDGTVWAW 1301
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G N QLG + S P+++ L ++ G H+ A++ DG + WG+N+ GQ+
Sbjct: 1302 GNNSGTQLGNGSSTDRS-TPVQVEALTG-AFSLAAGRFHTVAMSPDGAGWGWGRNNLGQV 1359
Query: 156 GLGKKAAKVIPIPTKVE 172
G G A + P+ V+
Sbjct: 1360 GDGTTADRPTPVNVMVQ 1376
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 170/333 (51%), Gaps = 38/333 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4113
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4114 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4172
Query: 160 KAAKVIPIPTKVECLSG----------IFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGR 208
+ K +P +V L G +F Q A G ++AV+ G ++ ++G G G+
Sbjct: 4173 TSNK--KLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGK 4230
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G ST++ +P+ + L G+ +K A G S + ++G VY FG DR +
Sbjct: 4231 LGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4281
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ NH RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4282 GLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4340
Query: 326 DVLHSPERV---QGPFSESPVDQVSCGWKHTAA 355
+ + P V QG V Q+S G H+AA
Sbjct: 4341 NHVREPTLVTVLQG----KNVRQISAGRCHSAA 4369
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 545 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 711 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 24/257 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4108 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4167
Query: 103 LGISENIGYSLEPLRISGLKKEVV-----------QISTGYHHSSAITVDGEL-YMWGKN 150
LG+ L P R++ L+ + Q++ G +H+ A++ DG + + +G
Sbjct: 4168 LGLGNTSNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDG 4226
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LGLG AK P KV+ L GI K+ A G + SVA+T G V ++G L
Sbjct: 4227 DYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 4284
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G R+ + P+ I L GV ++ A G H+ + G VY +G + ++
Sbjct: 4285 EG---------RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4335
Query: 271 LFQEGNHARRPSLISKL 287
NH R P+L++ L
Sbjct: 4336 GLGHTNHVREPTLVTVL 4352
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 26/298 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 418
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 479 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 529
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 530 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 589
Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 590 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 643
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 31/272 (11%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3975 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4030
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4031 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4080
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4081 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4139
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---------QGPFSESP 342
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV Q +
Sbjct: 4140 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLF 4199
Query: 343 VDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
QV+CG HT A+S + W +G G +G
Sbjct: 4200 FLQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4231
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 648 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 527 DGELYTWG----EGDFGRLGH 543
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G GD G+LG+G P S + +A HT FLT+ G VY TG ND GQL
Sbjct: 8 GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67
Query: 104 GISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + + P+R++ L +V I+ G+ H+ A+T G L WG + GQLG
Sbjct: 68 GV-RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNI 126
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ + + A G ++A+TG G V S+G G SG LGHG L
Sbjct: 127 VDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGN-------LD 179
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S TP L+K L G+ V A G HSA + +G+V+ +G ++ + + P
Sbjct: 180 GCS--TPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237
Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
+ L + ++ CGG HT +TS G L++WG G G G+ + + SP++V
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH-QLEG 296
Query: 341 SPVDQVSCGWKHTAA-ISEGKILTWG 365
+ QVS G +HT + G++ WG
Sbjct: 297 RVLVQVSAGARHTVVLLDRGEVYGWG 322
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 147/295 (49%), Gaps = 23/295 (7%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISG---LKKEVVQISTGYHHSSAITVDGELYMWG 148
VYA G D GQLGI + YS P S + K++V I+ +H++ +T +GE+Y G
Sbjct: 4 VYALGRGDLGQLGIGD---YSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N GQLG+ +V+PI +V L A GF+ +VAVT G + SWG G+
Sbjct: 61 SNDAGQLGVRGMEEQVVPI--RVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG + + G PR++K + AAG H+ + +G VY FGD +
Sbjct: 119 LGFDSGNIVDGV-------QPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSG 171
Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ + PSL+ L ++ CG H+ LT G+++TWG + G LG GS
Sbjct: 172 ALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQ 231
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSS 380
+ P V+ + V Q++CG HT AI S+G++ +WG HG + + GH +
Sbjct: 232 NIKLPVAVK-ALVDHDVIQIACGGDHTLAITSDGRLFSWG----HGLWGQTGHGT 281
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 142/287 (49%), Gaps = 25/287 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D G+LG+ +E + P+ +A + H + +ACG HT+ +TETG + + G +++GQL
Sbjct: 60 GSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119
Query: 104 GI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G S NI ++P + G + +++ G +H+ A+T G++Y +G S+G LG G
Sbjct: 120 GFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V+ L G+ Q A G S A+T GKV +WG G G+LGHG +I
Sbjct: 180 G--CSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI---- 233
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P +K L V A G H+ I +GR++ +G L+ + H +
Sbjct: 234 -----KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWG-----HGLWGQTGHGTKE 283
Query: 282 SLISKLPYSE-------EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++S + +V G HT VL GE+Y WG E LG
Sbjct: 284 DVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 41 ALWGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG +YG+LG G++ +P + +A GG HTL LT +G VY+ G
Sbjct: 109 ASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDG 168
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG G S L S V QI+ G +HS+A+TVDG+++ WG+ GQLG G
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + I +P V+ L Q A G + ++A+T G++ SWG G G+ GHG + +L
Sbjct: 229 --STQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVL 286
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+P+ + +LEG + +AG H+ + + G VY +GD
Sbjct: 287 ---------SPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG GS ++ PV A H + +ACGG HTL +T G +++ G +GQ
Sbjct: 217 WGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQ 276
Query: 103 LG--ISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G E++ L P ++ L+ V VQ+S G H+ + GE+Y WG QLG
Sbjct: 277 TGHGTKEDV---LSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 171/344 (49%), Gaps = 20/344 (5%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETG 90
S L++ WGN +G LGLG +E V C F+K S ++ +ACG +T+ +T G
Sbjct: 42 SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
+Y+ G ND+GQLG + G L I GL V + + G +H+ A+ G+L+ WG
Sbjct: 102 KIYSCGNNDYGQLGHEQ--GRKRLQL-ILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGS 158
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
NS GQLGL K P V+ L Q A G + ++A+T G++ SWG+ G+L
Sbjct: 159 NSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQL 217
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + E P+LI L GV + A G HS I ++G ++ +G +
Sbjct: 218 GLGVDIR--------CEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+ + + P + L ++ CG + LT G ++T G+ G LG GS +
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNN 329
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
P +V S V Q+SCG +HT A+ S+G++ WG GG+
Sbjct: 330 EILPRQVMELMG-STVTQISCGKRHTLALVPSQGRVYAWGLGGA 372
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 136/298 (45%), Gaps = 16/298 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + R R + + K ACG HT+ + E G +++ G N GQL
Sbjct: 107 GNNDYGQLG--HEQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQL 164
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L +VQI+ G H+ A+T +GELY WG NS GQLGLG
Sbjct: 165 GLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 224
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P + L+G+ A G S+A++ G + WG G+LG
Sbjct: 225 CEMK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 274
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L KV AA G S + +G V+ G ++ N+ P
Sbjct: 275 TQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 334
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ +L S ++ CG HT L S G +Y WG G LG S +P+ V+GP
Sbjct: 335 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVVRGP 392
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL ++R P + ACG ++FLT G V+ G +GQ
Sbjct: 262 WGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQ 321
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKKA 161
LG N L + + V QIS G H+ A + G +Y WG GQLG
Sbjct: 322 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTR 381
Query: 162 AKVIP 166
+ P
Sbjct: 382 STTTP 386
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 153/298 (51%), Gaps = 17/298 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G +++ +P + AF +++ ++CG HT L E G V+ G +FGQ
Sbjct: 11 WGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQ 70
Query: 103 LGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ ++ P +S L+ K V Q++ G+HH+ A+ +G+LY WG G+LG G +
Sbjct: 71 LGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDE 130
Query: 161 AAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P VE L G T AA GF SV + GG +L+WG G G+LGHG E
Sbjct: 131 VRQ--ASPKLVESLQGKEVTFVAAGGFHSSVIIE-GGNLLTWGGGYFGQLGHGDE----- 182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T TP+++K ++ A G H+ + ++ V+ +G K+ +
Sbjct: 183 ----TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHA 238
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P +I+ L + GG+H+ LTS G LYTWG + G LG G + + P V+
Sbjct: 239 EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVE 296
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 13/279 (4%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
VY+ G GQLG + L ++ L V Q+S G H++ + +GE++ +G+ +
Sbjct: 8 VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + P V L G KQ A G+ + A+ G++ +WG+G GRLGH
Sbjct: 68 FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G E + +P+L++ L+G +V AAG HS+ I E G + +G ++
Sbjct: 128 GDE---------VRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ + P ++ + + EV CG +HT +LT E++TWGS E G LGIG +
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHA 238
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
P + V +S G H+AA+ SEG + TWG G
Sbjct: 239 EPIMIT-ALQGVGVIHISTGGFHSAALTSEGVLYTWGGG 276
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G +V SWG G G+LGHG E ++ PRL+ G V+ + G H+A +
Sbjct: 5 GSEVYSWGQGVLGQLGHGDEK---------TQRQPRLVVAFLGFNVRQVSCGNQHTAILM 55
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGEL 309
ENG V+ FG R L Q + + P+L+S L + ++V CG +HTC L G+L
Sbjct: 56 ENGEVFTFG-RGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQL 114
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
YTWGS E G LG G SP+ V+ V V+ G H++ I E G +LTWG
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWG--- 170
Query: 369 SHGTFSEDGHSSGGQLDR 386
G F + GH G + DR
Sbjct: 171 -GGYFGQLGH--GDETDR 185
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G R P + ++ +ACG HTL LT++ V+ G +FG+
Sbjct: 169 WGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGK 228
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI + ++ EP+ I+ L+ V+ ISTG HS+A+T +G LY WG GQLG G +
Sbjct: 229 LGIGDEEKHA-EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDEN 287
Query: 162 AKVIPIPTKV 171
++ IP+ +V
Sbjct: 288 SQNIPVVVEV 297
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 164/321 (51%), Gaps = 24/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + P + SAF+ + + L +CG H++ LTETG V++ G DF
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3134
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ ++VVQ++ G+ HS+ +T DG+L+ +G +G+LG
Sbjct: 3135 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K++P +V L G Q + G ++ ++ G V ++G G G+LG G
Sbjct: 3194 TSNKMLP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3246
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
ST++Y P+ +++L +K G S + +G VY FG + D ML
Sbjct: 3247 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNR 3302
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
N PSL + E++ G H L+S G++Y WG N G LG+G + + P +
Sbjct: 3303 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLI 3360
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
+ Q+S G H++A
Sbjct: 3361 TA-LQGKNIKQISAGRCHSSA 3380
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 161/334 (48%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG ++ P ++K ++ HTL +T G V++ G ++
Sbjct: 437 GKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG N P I G K VV S GY HS+A+T DGELY WG+ G+LG
Sbjct: 497 GKLG-HGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHS 555
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ +PT V+ +SG+ Q A G ++AV G+ V S+G G +G+LGHG + +
Sbjct: 556 DSQSR--NMPTLVKDISGV--GQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRV 611
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L G ++ AG S + G+V+ +G + E
Sbjct: 612 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 661
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERV 334
+ RP + L ++ ++ CG H L+ E+Y WG+N G G G + P++V
Sbjct: 662 SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKV 721
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q++ G H TA ++ +++ W
Sbjct: 722 LG-LEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ E + RP A + + LACG H+ +T G ++ G + G+
Sbjct: 3129 WGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGR 3188
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG + + P R++ L+ V Q+S G +H+ +++DG ++ +G G+LG G
Sbjct: 3189 LG-QRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3247
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KVE L K+ G + SV V G V ++G + ++G
Sbjct: 3248 TAKY--YPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFG-----------QERLIGL 3294
Query: 221 LRST--SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + P+++ LEG+ ++ A G H + G VY +G + ++ N
Sbjct: 3295 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPV 3354
Query: 279 RRPSLISKL 287
+ P+LI+ L
Sbjct: 3355 KEPTLITAL 3363
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 20/286 (6%)
Query: 92 VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N QL G E I L P G + I G + + +++ DG + GK
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 438
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAGGSGR 208
S G+LGLG + +P +E I ++ G + ++A+T G+V SWG G G+
Sbjct: 439 GSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGK 498
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAV 267
LGHG S ++ P++I+ K+ + A+AG+ HSA + ++G +Y +G+
Sbjct: 499 LGHGN---------SATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDF 549
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSID 326
++ + P+L+ + +V CG HT + G ++++G +NG LG G +
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTN 609
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
++ P+ ++ + +V G + + A+ S G++ WG G G
Sbjct: 610 RVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 654
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 143 ELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++Y+WG GQL G G + +PT LS T+Q G S + G V +
Sbjct: 3021 DVYLWGNGRYGQLAGTGTN----LTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAV 3074
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGR 258
G G GRLG G + Y P +I +G V + + G HS + E G
Sbjct: 3075 GEGQYGRLGQGNSDDL---------YVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGE 3125
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +GD K+ RRP I L E+VV CG H+ V+T+ G+L+T+GS
Sbjct: 3126 VFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
E+G LG S PERV V QVSCG HT +S + W +G
Sbjct: 3185 ESGRLGQRSTSNKMLPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFG 3235
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G+YG+LG G+ ++ P + F K + A A G H+ +T+ G +Y G DF
Sbjct: 491 WGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASA-GYRHSAAVTKDGELYTWGEGDF 549
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
G+LG S++ ++ L ISG V Q++ G H+ A+ DG ++ +G NG+LG
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISG----VGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGH 605
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 606 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 658
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PR +++L K+ + G H + VY +G+ +
Sbjct: 659 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 703
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 595 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 654
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P + L +++ IS G H A++ + E+Y WG N+ GQ G G +
Sbjct: 655 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 712
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
I P KV L G+ +Q G S+ AV ++++W L + +
Sbjct: 713 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDLEESTFTYLC 771
Query: 219 GFLR 222
FL+
Sbjct: 772 NFLK 775
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 107/235 (45%), Gaps = 20/235 (8%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A+TV Y+WG NS+ QL G + I +P + S T +A G + +V+ G
Sbjct: 380 AVTV----YVWGSNSSHQLAEG--TLEKILLPKLTQGFSDAQTIEA--GQYCTFSVSTDG 431
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V + G G GRLG G +S+ + R IK KV + H+ I +
Sbjct: 432 SVKACGKGSYGRLGLG-DSNNQSLPKKLVLEPHRNIK-----KVSSSKGSDGHTLAITVD 485
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG--GY-HTCVLTSGGELYTWG 313
G V+ +GD K+ + P +I +S+ VV GY H+ +T GELYTWG
Sbjct: 486 GEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWG 545
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
+ G LG + P V+ S V QV+CG HT A+++ W +GG
Sbjct: 546 EGDFGRLGHSDSQSRNMPTLVK---DISGVGQVACGSSHTIAVAQDGRTVWSFGG 597
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG +SR P + + +ACG +HT+ + + G V++ G D G
Sbjct: 544 WGEGDFGRLGHSDSQSRNMPTLVKDIS--GVGQVACGSSHTIAVAQDGRTVWSFGGGDNG 601
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L ++ ++ G S A+T G+++ WG S LG G
Sbjct: 602 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 658
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE LS + G +A++ +V +WG G+ G G S+ +
Sbjct: 659 ETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 716
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + LEGV ++ AG HS
Sbjct: 717 -------RPKKVLGLEGVSIQQITAGTSHS 739
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 26/213 (12%)
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
CL T A+ G E AVT V WG+ S +L G IL P+L
Sbjct: 363 CLCSSSTDAASPGTEGD-AVT----VYVWGSNSSHQLAEGTLEKIL---------LPKLT 408
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+ + AG + + +G V G + ++ + N+ P + P+
Sbjct: 409 QGFSDAQT--IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNI 466
Query: 293 VVCGGY-----HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
HT +T GE+++WG E G LG G+ P+ +QGP V S
Sbjct: 467 KKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSAS 526
Query: 348 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 379
G++H+AA++ +G++ TWG G F GHS
Sbjct: 527 AGYRHSAAVTKDGELYTWG----EGDFGRLGHS 555
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 171/332 (51%), Gaps = 37/332 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4097
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4098 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4156
Query: 160 KAAKVIPIPTKVECLSGIFTKQA---------ALGFEQSVAVTGGGKVL-SWGAGGSGRL 209
+ K +P +V L G QA A G ++AV+ G ++ ++G G G+L
Sbjct: 4157 TSNK--KLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVD 268
G G ST++ +P+ + L G+ +K A G S + ++G+VY FG DR +
Sbjct: 4215 GLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIG 4265
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ NH RP + L E+V G HT LTS G++Y WGSN G LG+G +
Sbjct: 4266 LPEGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTN 4324
Query: 327 VLHSPERV---QGPFSESPVDQVSCGWKHTAA 355
+ P V QG V Q+S G H+AA
Sbjct: 4325 HVREPTLVTVLQG----KNVRQISAGRCHSAA 4352
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + QVS G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 23/256 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4092 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4151
Query: 103 LGISENIGYSLEPLRISGL----------KKEVVQISTGYHHSSAITVDGEL-YMWGKNS 151
LG+ L P R++ L K + ++ G +H+ A++ DG + + +G
Sbjct: 4152 LGLGNTSNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGD 4210
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G+LGLG AK P KV+ L GI K+ A G + SVA+T G+V ++G L
Sbjct: 4211 YGKLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPE 4268
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G R+ + P+ + L GV ++ A G H+ + G +Y +G + ++
Sbjct: 4269 G---------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLG 4319
Query: 272 FQEGNHARRPSLISKL 287
NH R P+L++ L
Sbjct: 4320 LGHTNHVREPTLVTVL 4335
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 30/271 (11%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3959 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4014
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4015 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4064
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4065 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4123
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--------PFSESPV 343
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV ++S +
Sbjct: 4124 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSII 4183
Query: 344 DQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
V+CG HT A+S + W +G G +G
Sbjct: 4184 CSVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQVSAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 164/321 (51%), Gaps = 24/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + P + SAF+ + + L +CG H++ LTETG V++ G DF
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3795
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ ++VVQ++ G+ HS+ +T DG+L+ +G +G+LG
Sbjct: 3796 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3854
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K+ P +V L G Q + G ++ ++ G V ++G G G+LG G
Sbjct: 3855 TSNKMQP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3907
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
ST++Y P+ +++L +K G S + +G VY FG + D ML
Sbjct: 3908 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNR 3963
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
N PSL + E++ G H L+S G++Y WG N G LG+G +++ P +
Sbjct: 3964 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLI 4021
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
+ Q+S G H++A
Sbjct: 4022 TA-LQGKNIKQISAGRCHSSA 4041
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 31/335 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ P E H K + G+ HTL +T G V++ G +
Sbjct: 394 GKGSYGRLGLGDSNNQSMPKKL-VLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGE 452
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P + G K VV S GY HS+A+T DGELY WG+ G+LG
Sbjct: 453 YGKLG-HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESS 216
++ PT V+ +SG+ Q A G ++AV G+ + S+G G +G+LGHG +
Sbjct: 512 SDSQSR--NTPTLVKDISGV--GQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNR 567
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L G ++ AG S + G+V+ +G + E
Sbjct: 568 V---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT 618
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPER 333
+ RP + L ++ ++ CG H L+ E+Y WG+N G G G + P++
Sbjct: 619 -SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKK 677
Query: 334 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
V G + Q++ G H TA ++ +++ W
Sbjct: 678 VLG-LEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 711
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 143 ELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++Y+WG GQL G G + +PT CLS T+Q G S + G V++
Sbjct: 3682 DVYLWGNGRYGQLAGTGTN----LTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMAV 3735
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGR 258
G G GRLG G + + P +I +G V + + G HS + E G
Sbjct: 3736 GEGQYGRLGQGNSDDL---------FVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGE 3786
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +GD K+ RRP I L E+VV CG H+ V+T+ G+L+T+GS
Sbjct: 3787 VFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGSG 3845
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
E+G LG S PERV V QVSCG HT +S + W +G
Sbjct: 3846 ESGRLGQRSTSNKMQPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFG 3896
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ E + RP A + + LACG H+ +T G ++ G + G+
Sbjct: 3790 WGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGR 3849
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG + ++P R++ L+ V Q+S G +H+ +++DG ++ +G G+LG G
Sbjct: 3850 LG-QRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3908
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KVE L K+ G + SV + G V ++G + ++G
Sbjct: 3909 TAKY--YPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFG-----------QERLIGL 3955
Query: 221 LRST--SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + P+++ LEG+ ++ A G H + G +Y +G + ++ N
Sbjct: 3956 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLV 4015
Query: 279 RRPSLISKL 287
+ P+LI+ L
Sbjct: 4016 KEPTLITAL 4024
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 24/288 (8%)
Query: 92 VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N QL G E I L P G + I G + + +++ DG + GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 395
Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
S G+LGLG + +P +E + +F+ + + G ++A+T G+V SWG G
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEVFSWGDGEY 453
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S ++ P++++ K+ + A+AG+ HSA + +G +Y +G+
Sbjct: 454 GKLGHGN---------SATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEG 504
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGS 324
++ + P+L+ + +V CG HT + G ++++G +NG LG G
Sbjct: 505 DFGRLGHSDSQSRNTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGD 564
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
+ ++ P+ ++ + +V G + + A+ S G++ WG G G
Sbjct: 565 TNRVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 611
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G+YG+LG G+ ++ P + F K + A A G H+ +T G +Y G DF
Sbjct: 448 WGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASA-GYRHSAAVTNDGELYTWGEGDF 506
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
G+LG S++ + L ISG V Q++ G H+ A+ DG ++ +G NG+LG
Sbjct: 507 GRLGHSDSQSRNTPTLVKDISG----VGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGH 562
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 563 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 615
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PR +++L K+ + G H + VY +G+ +
Sbjct: 616 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 660
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 26/238 (10%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A+TV Y+WG NS+ QL G + I +P + S T +A G + +V+ G
Sbjct: 337 AVTV----YVWGSNSSHQLAEG--TLEKILLPKLTQGFSDAQTIEA--GQYCTFSVSTDG 388
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR--LIKELEGVKVKIAAAGFL-HSACI 253
V + G G GRLG G S ++ P+ +++ +K ++ G H+ I
Sbjct: 389 SVKACGKGSYGRLGLGD---------SNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAI 439
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG--GY-HTCVLTSGGELY 310
+G V+ +GD K+ + P ++ +S+ VV GY H+ +T+ GELY
Sbjct: 440 TVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELY 499
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
TWG + G LG ++P V+ S V QV+CG HT A+++ W +GG
Sbjct: 500 TWGEGDFGRLGHSDSQSRNTPTLVK---DISGVGQVACGSSHTIAVAQDGRTMWSFGG 554
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 552 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 611
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P + L +++ IS G H A++ + E+Y WG N+ GQ G G +
Sbjct: 612 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 669
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
I P KV L G+ +Q G S+ AV ++++W L + +
Sbjct: 670 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDLEESTFTYLC 728
Query: 219 GFLR 222
FL+
Sbjct: 729 NFLK 732
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG +SR P + + +ACG +HT+ + + G +++ G D G
Sbjct: 501 WGEGDFGRLGHSDSQSRNTPTLVKDIS--GVGQVACGSSHTIAVAQDGRTMWSFGGGDNG 558
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L ++ ++ G S A+T G+++ WG S LG G
Sbjct: 559 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 615
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE LS + G +A++ +V +WG G+ G G S+ +
Sbjct: 616 ETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 673
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + LEGV ++ AG HS
Sbjct: 674 -------RPKKVLGLEGVSIQQITAGTSHS 696
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 162/336 (48%), Gaps = 22/336 (6%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G+LG+G + P +C F LK +ACGG HTLFL + G VY G N G
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L +++ +S G HS A+ G++++WG GQLGL +
Sbjct: 64 QLG-HDKAGNS--PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGL-ET 119
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + IP ++ L Q G + +A++ G++ +WG SG+LG G+
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK------- 172
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TS+ +P +K L G+ + AG H + +G V+ +G ++ +
Sbjct: 173 -GETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV 231
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P I K S+ VV CG HT LT G L+T+G G LG GS + P RV
Sbjct: 232 PCHI-KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM-E 289
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHG 371
+ V Q++CG HT A S G + +G SHG
Sbjct: 290 LMGTEVSQITCGRHHTLAFVPSSGTVYAFGC-NSHG 324
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG GD G+LGL + E+ R P + HS+ + CG H + L+ G ++ G N
Sbjct: 106 VWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSS 165
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + L P + L + QI+ G H A+++ G ++ WGKN GQLGL
Sbjct: 166 GQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLND 225
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P ++ L + G E + A+T G + ++G G G+LGHG
Sbjct: 226 KQDRA--VPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGS------ 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
S +E PR + EL G +V G H+ A + +G VY FG
Sbjct: 278 ---SNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFG 319
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT++G ++ G GQ
Sbjct: 213 WGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A + G +Y +G NS+GQLG G
Sbjct: 273 LGHGSS-NNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGIL 331
Query: 161 AAKVIPIPTKVECLS 175
A P P K + L+
Sbjct: 332 ADLRSPHPVKNDFLT 346
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG G E + + + PR+ G +K A G H+ + ++G
Sbjct: 1 MLCWGNARDGQLGIGVEGNPV--------FEPRICHVFSGRGLKEVACGGQHTLFLLQDG 52
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ + ++ P L+ L + V CG H+ + G+++ WG+
Sbjct: 53 SVYTCGSNSCGQLGHDKAGNS--PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAG 110
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
+ G LG+ + + R+ + + QV CG +H A+S +G++ TWG S
Sbjct: 111 DGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSS 165
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 20/313 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F + + CG HT+FL + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P + L ++ V +S G H+ A+ G+++ WG SNGQLGL
Sbjct: 64 GQLGHEKS---RKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++CLS + Q A G+ S A++ GG+V SWG G+LG G S +
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP++I+ L+G+ +AG HS I +G V+ +G ++ +
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRW 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ L S+ V+ CG HT LT ++T+G+ G LG + +P +V
Sbjct: 232 FPALLKSL-RSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKV-F 289
Query: 337 PFSESPVDQVSCG 349
+ V Q+SCG
Sbjct: 290 ELMGNVVTQISCG 302
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 129/278 (46%), Gaps = 25/278 (8%)
Query: 100 FGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I +EP + K V + G H+ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K P V L + G ++A+ G+V SWG G +G+LG
Sbjct: 67 GHEKSRKK----PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFE 122
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
+ PR IK L V++ A G+ HS + + G+V+ +G ++ L
Sbjct: 123 ECVR--------VPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMH 174
Query: 275 GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
G+ P +I L P+++ + GG H+ +T G ++ WG N+ G LG+ P
Sbjct: 175 GSSISTPQIIQSLQGIPFAQ-LSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFP 233
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGG 368
++ S+ V VSCG HTAA+++ + + T+G GG
Sbjct: 234 ALLKSLRSQR-VIFVSCGEDHTAALTKLRGVFTFGAGG 270
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG LG + PR + G +V G H+ + ++G
Sbjct: 1 MLCWGNASYGQLG-------LGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ ++ ++P + L V CG HT L G++++WG
Sbjct: 54 TVYTCGCNDLGQLGHEKSR--KKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLG 111
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
NG LG+ + + R S+ + QV+CG+ H+ A+S+ G++ +WG
Sbjct: 112 SNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWG 162
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Query: 14 LKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL-ESRWRPVVCSA 67
+ ++IK S + I C W S L + WG +G+LGLG S P + +
Sbjct: 127 VPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQS 186
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ L+ GGAH+ +T +G V+ G N FGQLG+++ L S + V+
Sbjct: 187 LQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIF 246
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+S G H++A+T ++ +G GQLG ++ P KV L G Q + G
Sbjct: 247 VSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEI--NPRKVFELMGNVVTQISCG 302
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 169/337 (50%), Gaps = 28/337 (8%)
Query: 43 WGNGDYGRLGLGSLESRWR-----PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG Y LG + S R P VC S+K +ACGG H++FL E G VY G+
Sbjct: 4 WG---YWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG E G +P +I L + +V ++ G HS A++ G+L+ WG S+GQLG
Sbjct: 61 NSKGQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 118 L-MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ +P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 177 --------SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P + KL +++VV CG HT VLT G ++T+G+ G LG GS++ +P R
Sbjct: 229 DRESPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRR 287
Query: 334 VQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGG 368
V S V Q++CG +HT A S G I +G G
Sbjct: 288 VL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 162/335 (48%), Gaps = 21/335 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+ G G ++ P A + + A G ++ F+T G +Y TG ND Q
Sbjct: 42 WGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQ 101
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +LEP+R+S L+ V ++ G H A+ +G L WG N GQLG G+
Sbjct: 102 LGV-KGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A P ++ + G + A G S+A+T G+V S+G G G LGHG
Sbjct: 161 ASAA-QPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGD-------- 211
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P L++ L + AAG SA + +GRV+ +G ++ E +A P
Sbjct: 212 -VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLP 270
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-------IDVLHSPERV 334
+ + + +V CG +H LT GE+YTWG + +G LG GS L SP RV
Sbjct: 271 QPVPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRV 330
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
++ + QVS G +H+ +S G+ L WG G +
Sbjct: 331 DS-LADQSIRQVSAGARHSFFVSPGEQL-WGAGAN 363
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 136/314 (43%), Gaps = 28/314 (8%)
Query: 41 ALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ +YG+LG G + S +P V +A G H+L LT +G VY+ G
Sbjct: 144 AAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGS 203
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FG LG + + +P + L E +V I+ G + S+A+++ G ++ WG+N GQLG G
Sbjct: 204 FGALGHGD-VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNG 262
Query: 159 KKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--- 214
+ +P P + GI Q A G +A+T G+V +WG SG+LG G
Sbjct: 263 EFGNAFLPQP-----VPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGS 317
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
++ G L S P + L ++ +AG HS + +++ G ++ Q
Sbjct: 318 EALNGCLCS-----PSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQS 372
Query: 275 GNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE------NGCLGIGSI 325
P+ + LP V G + VL L G C+ +
Sbjct: 373 VPSVALPTRVPGLPGLPMRFAVAAGDHSIAVLDESSGLQNGGLQRRTSGPCRSCMMTLQM 432
Query: 326 --DVLHSPERVQGP 337
D+LH E GP
Sbjct: 433 PPDLLHYAEAATGP 446
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 54/270 (20%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG++ GQ G G+ P P V+ L G AA G S VT G++ + G+
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEP--VQALQGKDVVHAAGGSYNSAFVTRDGELYTTGS 96
Query: 204 GGSGRLG-HGQESSILGFLRS------------------------------TSEY----- 227
+ +LG G+E ++ S ++EY
Sbjct: 97 NDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGT 156
Query: 228 --------TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR++K + G AAG HS + +G+VY FG+ + + + N+
Sbjct: 157 GEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRA 216
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+P+L+ L + E +V G Y + ++ G ++TWG N+ G LG G P+ V
Sbjct: 217 KPTLVQAL-WPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQPV-- 273
Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWG 365
P E V QV+CG H A++ G++ TWG
Sbjct: 274 PGIEQAV-QVACGDHHCIALTRWGEVYTWG 302
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 168/330 (50%), Gaps = 35/330 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2736
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2737 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2795
Query: 160 KAAKVIPIPTKVECLSGIFTKQA-------ALGFEQSVAV-TGGGKVLSWGAGGSGRLGH 211
+ K +P +V L G QA A G ++AV T G V ++G G G+LG
Sbjct: 2796 TSNK--KLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGL 2853
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKM 270
G ST++ +P+ + L G+ +K A G S + ++G VY FG DR +
Sbjct: 2854 GN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 2904
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ NH RP + L E+V G HT L S G++Y WGSN G LG+G + +
Sbjct: 2905 EGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 2963
Query: 329 HSPERV---QGPFSESPVDQVSCGWKHTAA 355
P V QG + Q+S G H+AA
Sbjct: 2964 REPTLVTVLQG----KNIRQISAGRCHSAA 2989
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2731 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2790
Query: 103 LGISENIGYSLEPLRISGLK--------KEVVQISTGYHHSSAITVDGEL-YMWGKNSNG 153
LG+ L P R++ L+ + ++ G +H+ A++ DG + + +G G
Sbjct: 2791 LGLGNTSNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYG 2849
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LGLG AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2850 KLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG- 2906
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
R+ + P+ + L GV ++ A G H+ + G VY +G + ++
Sbjct: 2907 --------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2958
Query: 274 EGNHARRPSLISKL 287
NH R P+L++ L
Sbjct: 2959 HTNHVREPTLVTVL 2972
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 30/270 (11%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++++WG +GQL +A + + +P S
Sbjct: 2598 INGMDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2653
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 2654 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2703
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 2704 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2762
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ------ 345
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV + Q
Sbjct: 2763 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSY 2821
Query: 346 -VSCGWKHTAAISEGKILTWGWG-GSHGTF 373
V+CG HT A+S + W +G G +G
Sbjct: 2822 SVACGLNHTLAVSTDGSMVWAFGDGDYGKL 2851
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 160/313 (51%), Gaps = 20/313 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWG 367
S G I +G G
Sbjct: 310 VPSSGLIYAFGCG 322
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL----- 118
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
S PRLI++L + + G H + +G+ + +G + ++ F
Sbjct: 119 ---MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF 175
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 176 PSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 235 HVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 165/317 (52%), Gaps = 21/317 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+GN ++G+LG+GS ++R +P A + + +A G HTL +T++ +Y+ G G
Sbjct: 59 FGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGA 118
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + ++ P I L+ K+V I+ G +HS+AIT +GELY+WG NS GQLGL
Sbjct: 119 LGHGDETDLNM-PTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL---K 174
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
I PT ++ + + A G+ + VT GK+ ++G G+LG LG +
Sbjct: 175 NDTISYPTMLDLGKSVIS--VACGYYHTAVVTADGKLYTFGETEGGKLG-------LGDI 225
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
+ P+++K + G VK+A G H+ + +G+VY FG ++ L + +
Sbjct: 226 EAHKVTKPKVVKGISGKVVKVACGGN-HTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI 284
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQG 336
P L+ L + + CG HT V++ GEL+T+G +G LG G S L P +VQ
Sbjct: 285 PKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQ- 343
Query: 337 PFSESPVDQVSCGWKHT 353
E V ++CG HT
Sbjct: 344 RLKEFIVLHIACGGCHT 360
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 161/303 (53%), Gaps = 21/303 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
+ACG HT+ +TE G ++ G N++GQLGI N + +P + LK E + ++ G H
Sbjct: 40 IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRN-KPTTVKALKPEKITHVAAGRFH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T +LY +G+ S G LG G + + +PT +E L A G S A+T
Sbjct: 99 TLAVTDSNKLYSFGQGSEGALGHGDETD--LNMPTSIESLEDKDVNIIACGGYHSAAITK 156
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ WG+ G+LG L++ + P ++ +L G V A G+ H+A +
Sbjct: 157 NGELYIWGSNSEGQLG----------LKNDTISYPTML-DL-GKSVISVACGYYHTAVVT 204
Query: 255 ENGRVYIFGDRAVDKMLF--QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
+G++Y FG+ K+ E + +P ++ + +V CGG HT LT+ G++YT
Sbjct: 205 ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQVYT 264
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
+GS +NG LG+GS + + ++ S+ + ++CG HTA +S+ G++ T+G G H
Sbjct: 265 FGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFG-DGRH 323
Query: 371 GTF 373
G
Sbjct: 324 GKL 326
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 130/247 (52%), Gaps = 17/247 (6%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G H+ +T +G L+ +G N GQLG+G + K PT V+ L A
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIG--SNKTRNKPTTVKALKPEKITHVA 93
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G ++AVT K+ S+G G G LGHG E+ + P I+ LE V I
Sbjct: 94 AGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL---------NMPTSIESLEDKDVNII 144
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
A G HSA I +NG +YI+G + + L + + P+++ V CG YHT V+
Sbjct: 145 ACGGYHSAAITKNGELYIWGSNS-EGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVV 203
Query: 304 TSGGELYTWGSNENGCLGIGSIDV--LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
T+ G+LYT+G E G LG+G I+ + P+ V+G + V +V+CG HT A++ G+
Sbjct: 204 TADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGK--VVKVACGGNHTVALTASGQ 261
Query: 361 ILTWGWG 367
+ T+G G
Sbjct: 262 VYTFGSG 268
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 38/299 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G G LG G P + E + +ACGG H+ +T+ G +Y G N GQ
Sbjct: 111 FGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQ 170
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ I Y P + L K V+ ++ GY+H++ +T DG+LY +G+ G+LGLG
Sbjct: 171 LGLKNDTISY---PTMLD-LGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIE 226
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A + P V+ +SG K A G +VA+T G+V ++G+G +G+LG G S I+
Sbjct: 227 AHKVTKPKVVKGISGKVVK-VACGGNHTVALTASGQVYTFGSGQNGQLGLG--SKIM--- 280
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-- 279
P+L++ L K+K A G H+A + + G ++ FGD G H +
Sbjct: 281 ---DSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGD----------GRHGKLG 327
Query: 280 ----------RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+P + +L + CGG HT V + + G ++N +D
Sbjct: 328 QGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNESSSNDEVD 386
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 170/350 (48%), Gaps = 32/350 (9%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G Y +LG S+E S+ P F + +++CG ++ LTE G VY G
Sbjct: 547 WGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSV 606
Query: 101 GQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
I+ L P ++ L+ E+V IS G++HS+A+ +GEL WG +GQLG
Sbjct: 607 KNPPIATLGNGTFDDQLLPQKVESLQ-EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLG 665
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + PIP V+ ++ + Q G + ++ +T GKV +WG G+LG G
Sbjct: 666 HGDVFNQ--PIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD--- 720
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ TP L+ L+ + A G H+A + N V +FG+ A N
Sbjct: 721 ------TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAA----MGSAN 770
Query: 277 HARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P ++ K+ E + CG Y T LT G++YTWGS + G G+ + P+ V
Sbjct: 771 IISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQELGHGHGTSEA--HPKLV 828
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
+ ++S + Q+SCG +H A +++ GKI T G F + GH++G Q
Sbjct: 829 ETLRNQS-IRQISCGGRHMAFLTDSGKIYTSG----KDPFGQLGHAAGDQ 873
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 20/263 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G + ++ P V + H + + CG HT+ LT+ G V+ G +++GQ
Sbjct: 656 WGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 715
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + P+ ++ L K ++QI+ G H++ +T + E+ ++G G +
Sbjct: 716 LGLGDT-QKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN------GAAMGS 768
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A +I IP V L + ++ + G + A+T G V +WG+G LGHG
Sbjct: 769 ANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSG--QELGHGH-------- 818
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TSE P+L++ L ++ + G H A + ++G++Y G ++ G+ R
Sbjct: 819 -GTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGDQNRPK 877
Query: 282 SLISKLPYS-EEVVCGGYHTCVL 303
+ S L + + CG H L
Sbjct: 878 KIDSLLKTTFMSISCGENHNAAL 900
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+ + + +++L + + +++WG+G +LG + S+ TP +
Sbjct: 520 LNAVNSAESSLSMRSATQLDTSRGLMTWGSGSYCKLGFKS-------VEKDSQPTPERLP 572
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-DKMLFQEGNHARRPSLI-SKLPYSE 291
+ + G +SA + ENG VY++G +V + + GN L+ K+ +
Sbjct: 573 NFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQ 632
Query: 292 EVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP-ERVQGPFSESPVDQVS 347
E+V G YH+ + S GEL TWG E+G LG G DV + P +V + V QV
Sbjct: 633 EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHG--DVFNQPIPKVVQSITSHWVTQVQ 690
Query: 348 CGWKHTAAISE-GKILTWG 365
CG KHT +++ GK+ TWG
Sbjct: 691 CGEKHTICLTKNGKVFTWG 709
>gi|159486867|ref|XP_001701458.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271640|gb|EDO97455.1| predicted protein [Chlamydomonas reinhardtii]
Length = 591
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 179/403 (44%), Gaps = 78/403 (19%)
Query: 38 RFAALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R +GN D+GRLGLG +L S P V A ++ L+ LA GGAHT+ +T G V+
Sbjct: 3 RLLVAFGNADHGRLGLGATTLSSVMTPRVNLALARYDLENLAAGGAHTVVVTRGGLVFTF 62
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLN GQLG S + EP + L + V ++ G H++ +T G +Y +G N++GQL
Sbjct: 63 GLNTRGQLGHSAEADSAAEPGNVL-LPEPVAAVAAGDAHTACLTESGRVYTFGCNASGQL 121
Query: 156 GLGKKAAKVIP-------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+G+ A IP P VE L+G A G S+AVT G++ +WG G GR
Sbjct: 122 GVGRDA---IPGGRSHSARPMLVEALTGQRVVSVAAGAAHSLAVTDSGRLYAWGLGDHGR 178
Query: 209 LGHGQESSILGFLRSTS------------------------------EYTPRLI--KELE 236
LG G S S+ E+ PR + L
Sbjct: 179 LGLGPPPSAASSSNSSCGSDGSSDSSSDRTSSSSSCSEGGGARSPWVEWLPRAVTTAALG 238
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-----------NHARRPSL-- 283
G K AG SAC+DE GRVY +G A+ ++ G + P L
Sbjct: 239 GSKPAEVFAGPATSACMDEAGRVYTWGFGALHQLGHGAGAAAGGGGRATPDDEWEPRLVD 298
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP----ERVQGPFS 339
+S L + + GG H + ++ WGS+ + GIGS+ ++ GP
Sbjct: 299 VSSLRRTRRLALGGAHALACRTDERVHVWGSDPS---GIGSLGMMPGSGLGLGPAPGPLP 355
Query: 340 ESPV------------DQVSCGWKHTAAI-SEGKILTWGWGGS 369
S V V+ G H+A + S+GK+ WGWGG+
Sbjct: 356 GSAVVIPAPTIFRWWFTDVAAGLAHSAGVSSDGKLFAWGWGGA 398
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 109/276 (39%), Gaps = 59/276 (21%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +G +G+LGLG + P L+ + A G +V VT GG V ++G
Sbjct: 5 LVAFGNADHGRLGLGATTLSSVMTPRVNLALARYDLENLAAGGAHTVVVTRGGLVFTFGL 64
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH E+ S +E L+ E V AAG H+AC+ E+GRVY FG
Sbjct: 65 NTRGQLGHSAEAD------SAAEPGNVLLPE----PVAAVAAGDAHTACLTESGRVYTFG 114
Query: 264 DRA-----VDKMLFQEG-NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
A V + G +H+ RP L+ L V G H+ +T G LY WG
Sbjct: 115 CNASGQLGVGRDAIPGGRSHSARPMLVEALTGQRVVSVAAGAAHSLAVTDSGRLYAWGLG 174
Query: 316 ENGCLGIGSIDVLHSPERV---------------------------QGPFSE-------- 340
++G LG+G S + P+ E
Sbjct: 175 DHGRLGLGPPPSAASSSNSSCGSDGSSDSSSDRTSSSSSCSEGGGARSPWVEWLPRAVTT 234
Query: 341 -----SPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
S +V G +A + E G++ TWG+G H
Sbjct: 235 AALGGSKPAEVFAGPATSACMDEAGRVYTWGFGALH 270
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 160/313 (51%), Gaps = 20/313 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWG 367
S G I +G G
Sbjct: 310 VPSSGLIYAFGCG 322
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 71 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 127
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 128 LADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 186
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 187 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 238
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 297
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 298 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 356
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 357 VPSSGLIYAFGCGA 370
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A ++ +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 121 KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 180
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 239
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V +WG +G+LG E +P +K L K
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE---------DRESPCHVKLLRTQK 290
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 291 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 350
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
HT S G +Y +G G LG G + P V+G
Sbjct: 351 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 390
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 155 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 214
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 215 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDE 274
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH +
Sbjct: 275 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN----- 327
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 328 ----DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 367
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 142/291 (48%), Gaps = 30/291 (10%)
Query: 98 NDFG--QLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
ND G Q GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+
Sbjct: 52 NDLGASQPGISTNLRGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 110
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG ++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 111 GQLGHEREGNK----PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLG-- 164
Query: 213 QESSILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 165 --------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 216
Query: 271 ----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ +
Sbjct: 217 GLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE 275
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
SP V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 276 DRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 324
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+A G+N+ G
Sbjct: 208 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAG 267
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 268 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 326
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 327 NDEV--NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 382
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 261 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 320
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 321 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 379
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 380 CNVKCPSPVK 389
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 171/337 (50%), Gaps = 23/337 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLND 99
WG G+LG+G E + P + E S ++ ++CG HT FL + G VY G N+
Sbjct: 4 WGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNE 63
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FGQLG ++ P + ++ + +++ G H+ A++ G ++ WG NS GQ+GLG
Sbjct: 64 FGQLGQEKS---HTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLG 120
Query: 159 KKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
K KV IP ++ L+ + Q A G S+A+T G + WG SG+LG G+ S
Sbjct: 121 SKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHS- 179
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S SE P L L GV + +AG HS + +G ++ +G ++ +
Sbjct: 180 -----SMSEPAPVL--SLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTD 232
Query: 278 ARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P+L+ L S+ V CG HT VLTS G ++T+G +G LG S ++P +V
Sbjct: 233 RPLPTLLKSL-RSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKV 291
Query: 335 QGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG HT A+ S G++ T+G GG
Sbjct: 292 -FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGD 327
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 18/304 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ ++G+LG +S P A E ++ + CG AHT+ +++ G V+A G N +GQ+
Sbjct: 60 GSNEFGQLG--QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117
Query: 104 GISENIGYSLE--PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+ + ++ P + GL K VVQI+ G +HS A+T+ G L+ WG NS+GQLG+GK
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKT 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P V L+G+ + G S A++ G + WG G+LG
Sbjct: 178 HSSMSE-PAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD------- 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P L+K L V + G H+A + +G V+ FG ++ +H
Sbjct: 230 --TTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT 287
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + +L S ++ CG HT L S G +YT+G +G LG+G + +SP +GP
Sbjct: 288 PRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGP 347
Query: 338 FSES 341
+ S
Sbjct: 348 WLRS 351
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G S P + ++ GGAH+ L+ +G ++ G N++G
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ + L L S + V +S G H++ +T DG ++ +G ++GQLG
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNH 283
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+ P KV L G Q A G ++A V G+V ++G GG G+LG G
Sbjct: 284 HEY--TPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 28/235 (11%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWG 202
++ WGK S GQLG+G+ + I P +E L ++ + G+ + + G V + G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ G+LG + S P + +E + G H+ + + G V+ +
Sbjct: 61 SNEFGQLG-----------QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAW 109
Query: 263 GDRAVDKMLFQEGNHARR-----PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
GD + ++ G+ + P ++ L ++ CG H+ LT G L+ WG N
Sbjct: 110 GDNSYGQIGL--GSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDN 167
Query: 316 ENGCLGIGSIDVLHSPERVQGP---FSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+G LGIG HS P + P +S G H+ A+S L +GWG
Sbjct: 168 SSGQLGIGKT---HSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGAL-FGWG 218
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1160
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 165/351 (47%), Gaps = 34/351 (9%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCS----AFEKHSLKALACGGAHTLFLTETGCVYAT 95
A WG +YG+LG G+L R +PV+ A + ++ G +L + G VYA
Sbjct: 688 AYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGSDGYVYAW 747
Query: 96 GLNDFGQLGISENIGYSLEPLRI-------SGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G N+ GQLG + GYS PLR+ SGL VQ+S GY+HS A+ G ++ WG
Sbjct: 748 GNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLT--AVQVSAGYYHSLALDARGNIWAWG 805
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSG 207
N G+LG G IP + +G T Q + GF + A+ G SWG G
Sbjct: 806 FNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFG 865
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG+G ++I + +Y PR + ++V +AG HS ID G + +G +
Sbjct: 866 QLGNG--NNIDSAIPVPVQY-PRDAGTVRAIQV---SAGADHSLIIDTKGNTWAWGWNQL 919
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELYTWGSNENGC 319
++ + P + + Y E +V GGYH+ + G + WG N++G
Sbjct: 920 GELGNGSSSADANP-VPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGE 978
Query: 320 LGIGSIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAIS-EGKILTWGWG 367
LGIG+ P VQ P + V QVS G H+ I EGK TW WG
Sbjct: 979 LGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGK--TWAWG 1027
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 148/317 (46%), Gaps = 32/317 (10%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA------LACGGAHTLFLTETGCV 92
+ WGN + G+LG GS + V + + ++ ++ G H+L L G +
Sbjct: 743 YVYAWGNNESGQLGNGS-SGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALDARGNI 801
Query: 93 YATGLNDFGQLGISENIGYSLEPL----RISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+A G N FG+LG NI ++ L R +G +Q+S G+HH++AI G + WG
Sbjct: 802 WAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVT-AIQVSGGFHHTAAIDTKGNTWSWG 860
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
N GQLG G IP+P + +G + Q + G + S+ + G +WG G
Sbjct: 861 WNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLG 920
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
LG+G S + + P ++K E ++++A G+ HS ID+NG + +G
Sbjct: 921 ELGNGSSS-------ADANPVPGMVKYPENAGTVTAIQVSAGGY-HSLAIDKNGNAWAWG 972
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE------EVVCGGYHTCVLTSGGELYTWGSNEN 317
++ + + P+L+ + P + +V GGYH+ + G+ + WG N+
Sbjct: 973 GNDSGELGIGTTSKSEIPALV-QYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQF 1031
Query: 318 GCLGIGSIDVLHSPERV 334
G LG G+I P V
Sbjct: 1032 GQLGNGTISNSSIPTPV 1048
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 138/308 (44%), Gaps = 33/308 (10%)
Query: 83 TLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
TL + G YA G N++GQLG N ++ + VQ+S G S A+
Sbjct: 679 TLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAV 738
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTG 194
DG +Y WG N +GQLG G +P +V + SG+ Q + G+ S+A+
Sbjct: 739 GSDGYVYAWGNNESGQLGNGSSGGYST-VPLRVIDPNDPRSGLTAVQVSAGYYHSLALDA 797
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + +WG G LG+G ++I + + ++Y PR + ++V + GF H+A ID
Sbjct: 798 RGNIWAWGFNQFGELGNG--NNINSAIPTLAQY-PRDAGTVTAIQV---SGGFHHTAAID 851
Query: 255 ENGRVYIFG---------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G + +G +D + + R + + +V G H+ ++ +
Sbjct: 852 TKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI----QVSAGADHSLIIDT 907
Query: 306 GGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAISEGKI 361
G + WG N+ G LG G S D P V+ P + V QVS G H+ AI +
Sbjct: 908 KGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGN 967
Query: 362 LTWGWGGS 369
W WGG+
Sbjct: 968 -AWAWGGN 974
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 153/333 (45%), Gaps = 33/333 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG GS R PV S + A+A GGAHT L +G V+ G N GQ
Sbjct: 135 WGGNYFGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALMSSGGVWCWGYNLSGQ 193
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I Y + P+ +SGL EV I+ GY H+ A+T G ++ WG N GQLG G
Sbjct: 194 LGDGSTI-YHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTD 252
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +P+ V + A G + A+T G V WG SG+LG G
Sbjct: 253 SSTPAAVGGLPSGVTAI--------AAGGRYTCALTSSGGVWCWGRNDSGQLGDGSF--- 301
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T+ TP + L IAA G H+ + +G V+ +G D +G++
Sbjct: 302 ------TNRSTPGAVGGLPSGVTAIAAGG-AHTCALTSSGGVWCWGGN--DSGQLGDGSY 352
Query: 278 ARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
R P +S LP + GG HTC TS G ++ WG N G LG G+ +P V
Sbjct: 353 TDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAV 412
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
G S V ++ G HT A++ G W WG
Sbjct: 413 SG--LPSGVTAIAAGNYHTCALT-GSDGVWCWG 442
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 151/327 (46%), Gaps = 23/327 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R PV S + A+A GGAHT LT +G V G N FGQ
Sbjct: 84 WGYNWSGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGGVMCWGGNYFGQ 142
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G ++ WG N +GQLG G
Sbjct: 143 LGDGSYTDRS-TPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIY 201
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G+ + A+TG G V WG G G+LG G
Sbjct: 202 HITPV--AVSGLPSEVTAIAA-GYAHTCALTGSGGVWCWGDNGFGQLGDGSF-------- 250
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T TP + L IAA G ++ + +G V+ +G D +G+ R
Sbjct: 251 -TDSSTPAAVGGLPSGVTAIAAGG-RYTCALTSSGGVWCWGRN--DSGQLGDGSFTNRST 306
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P + LP + GG HTC LTS G ++ WG N++G LG GS +P V G
Sbjct: 307 PGAVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSG--L 364
Query: 340 ESPVDQVSCGWKHTAA-ISEGKILTWG 365
S V ++ G HT A S G + WG
Sbjct: 365 PSGVTAIAAGGAHTCARTSSGGVWCWG 391
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 146/330 (44%), Gaps = 29/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R P S + A+A G HT LT +G V+ G ND GQ
Sbjct: 441 WGDNFYGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGRNDSGQ 499
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P + GL V I+ G +H+ A+ G ++ WG N+ GQLG G
Sbjct: 500 LGDGTTTNRS-TPGAVGGLPSGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTD 558
Query: 163 KVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P+ P+ V + A G + A+TG V WG G+LG G
Sbjct: 559 SSTPVAVGGLPSGVMAI--------AAGNYHTCALTGSDGVWCWGTNSDGQLGDGT---- 606
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T+ TP + L V AAG H+ + +G V+ +G ++ +
Sbjct: 607 -----TTNRSTPVAVSGLP-SGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTN 660
Query: 278 ARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P +S LP + G HTC LT G ++ WG N G LG G+ +P V G
Sbjct: 661 RSTPGAVSGLPSGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSG 720
Query: 337 PFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
S V ++ G HT A++ G ++ WG
Sbjct: 721 --LPSGVTAIAAGVYHTCALTGSGGVMCWG 748
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 29/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R P S + A+A G HT LT + V+ G N +GQ
Sbjct: 390 WGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQ 448
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G +H+ A+T G ++ WG+N +GQLG G
Sbjct: 449 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTN 507
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P +P+ V + A G + A+ G V WG G+LG G
Sbjct: 508 RSTPGAVGGLPSGVTAI--------AAGDYHTCALMSSGGVWCWGLNNRGQLGDGSY--- 556
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T TP + L + I AAG H+ + + V+ +G + ++ +
Sbjct: 557 ------TDSSTPVAVGGLPSGVMAI-AAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609
Query: 278 ARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P +S LP + G YHTC LTS G ++ WG N +G LG G+ +P V G
Sbjct: 610 RSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSG 669
Query: 337 PFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
S V ++ G +HT A++ G + WG
Sbjct: 670 --LPSGVTAIAAGDEHTCALTGSGGVWCWG 697
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ +R P + A+A G HT L +G V+ GLN+ GQ
Sbjct: 492 WGRNDSGQLGDGTTTNRSTPGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWGLNNRGQ 550
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + GL V+ I+ G +H+ A+T ++ WG NS+GQLG G
Sbjct: 551 LGDGSYTDSS-TPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+T G V WG SG+LG G
Sbjct: 610 RSTPV--AVSGLPSGVTAIAA-GNYHTCALTSSGGVWCWGYNLSGQLGDGT--------- 657
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V AAG H+ + +G V+ +GD ++ + P
Sbjct: 658 TTNRSTPGAVSGLP-SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPG 716
Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + G YHTC LT G + WG+N +G LG G
Sbjct: 717 AVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG 758
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 141/303 (46%), Gaps = 19/303 (6%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A G HT LT +G V+ G N GQLG S P+ +SGL
Sbjct: 54 SSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRS-TPVAVSGLPSG 112
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ G H+ A+T G + WG N GQLG G + P+ V L T AA
Sbjct: 113 VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPV--AVSGLPSGVTAIAA- 169
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + A+ G V WG SG+LG G S+I TP + L +V A
Sbjct: 170 GGAHTCALMSSGGVWCWGYNLSGQLGDG--STIY-------HITPVAVSGLP-SEVTAIA 219
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
AG+ H+ + +G V+ +GD ++ + P+ + LP + GG +TC L
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCAL 279
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
TS G ++ WG N++G LG GS +P V G S V ++ G HT A+ S G +
Sbjct: 280 TSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGG--LPSGVTAIAAGGAHTCALTSSGGVW 337
Query: 363 TWG 365
WG
Sbjct: 338 CWG 340
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G HT LT +G V+ G N GQ
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQ 652
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G H+ A+T G ++ WG N GQLG G
Sbjct: 653 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTN 711
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ---E 214
+ P +P+ V + A G + A+TG G V+ WG G G+LG G+
Sbjct: 712 RSTPGAVSGLPSGVTAI--------AAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYR 763
Query: 215 SSILGFLRSTS--EYTPRLIK 233
++ + + S S Y P +++
Sbjct: 764 TTPVDVVTSASWGVYLPMIVR 784
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--P 281
TS ++P L+GV AAG H+ + +G V+ +G ++ +G++ R P
Sbjct: 53 TSSFSP-----LQGVTAI--AAGSWHTCALTGSGEVWCWGYNWSGQL--GDGSYTDRSTP 103
Query: 282 SLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
+S LP + GG HTC LTS G + WG N G LG GS +P V G
Sbjct: 104 VAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSG--LP 161
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGW 366
S V ++ G HT A+ S G + WG+
Sbjct: 162 SGVTAIAAGGAHTCALMSSGGVWCWGY 188
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 162/329 (49%), Gaps = 33/329 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G G G+ +R PV A+A G H+L G V+A G ND GQ
Sbjct: 370 WGSNFSGERGEGTTNNRASPVQVQGLGGG--VAVAAGFNHSLAARSDGSVWAWGSNDSGQ 427
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N S P+++ GL VV ++ G+ HS A+ DG ++ WG N+ GQLG G
Sbjct: 428 LGDGTTRN---STSPVQVQGLSG-VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT 483
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+++P V+ LSG+ A G S+AV G V +WG+ G+LG G S+ L
Sbjct: 484 TNRLVP----VQVLSGVVA--VAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRL-- 535
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P ++ L GV AAG HS + +G V+ +G + ++ +G + R
Sbjct: 536 -------VPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGEL--GDGTTSNR 584
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L V GG+H+ V+ S G ++TWGSN G LG G+ P +VQG
Sbjct: 585 LVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQG-- 642
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGW 366
S V V G H+ A+ S+G + TWG+
Sbjct: 643 -LSGVVAVDAGNSHSLAVRSDGTVWTWGY 670
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 157/319 (49%), Gaps = 37/319 (11%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+ S LA G +++L L G V+ATG ND GQLG +S P+++ GL VV +
Sbjct: 44 DAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHS-APVQVPGLSG-VVAV 101
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS A+ DG ++ WG NS+GQLG G ++ P+ +V+ LSG+ + A G
Sbjct: 102 AAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPV--RVQGLSGVVS--VAAGSSY 157
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+AV G V +WG+ SG+LG G S+ L P + L GV V + AAG
Sbjct: 158 SLAVRSDGTVWAWGSNFSGQLGDGTTSNRL---------VPVQVPGLSGV-VSV-AAGSS 206
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSG 306
HS + +G V+ +G + ++ +G R P + L V G H+ + S
Sbjct: 207 HSLAVLSDGSVWAWGANSSGQL--GDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSD 264
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G ++TWG+N G LG G+ P RVQG S V G H+ A+ S+G + W
Sbjct: 265 GTVWTWGANSFGQLGDGTKSDRLVPVRVQG---LSGVVASDVGSYHSLALRSDGSVWAW- 320
Query: 366 WGGSHGTFSEDGHSSGGQL 384
GH+S GQL
Sbjct: 321 -----------GHNSSGQL 328
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 155/324 (47%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + ++A G +++L + G V+A G N GQ
Sbjct: 120 WGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQ 177
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV ++ G HS A+ DG ++ WG NS+GQLG G K
Sbjct: 178 LG-DGTTSNRLVPVQVPGLSG-VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKIN 235
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V LSG+ A S+AV G V +WGA G+LG G +S L
Sbjct: 236 RLVPV--QVPGLSGVVAVAAG--AAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRL---- 287
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV + G HS + +G V+ +G + ++ P
Sbjct: 288 -----VPVRVQGLSGVVA--SDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPV 340
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L V G H+ + S G ++ WGSN +G G G+ + SP +VQG
Sbjct: 341 QVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGV- 399
Query: 343 VDQVSCGWKHT-AAISEGKILTWG 365
V+ G+ H+ AA S+G + WG
Sbjct: 400 --AVAAGFNHSLAARSDGSVWAWG 421
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ +R P A+A GG H+L + G V+ G N FG+
Sbjct: 568 WGSNSSGELGDGTTSNRLVPGRVPGLSGG--VAVAAGGFHSLVVRSDGTVWTWGSNSFGE 625
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ P+++ GL VV + G HS A+ DG ++ WG NS GQLG G
Sbjct: 626 LGDGTTTSRSV-PVQVQGLSG-VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTR 683
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ +P+ +V LSG+ A G + V G V +WG G+LG+G
Sbjct: 684 RSVPV--QVPGLSGVVAM--ATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 319 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 378
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 379 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 437
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 438 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 495
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 496 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 542
Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ Q GN HA + P+ + KL + EE+ CG YH VLTS E+YTWG NG LG
Sbjct: 543 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 602
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G +D +SP V+ + V ++CG TAA+
Sbjct: 603 GDVDDRNSPTLVES-LKDKQVKSIACGTNFTAAV 635
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 156/317 (49%), Gaps = 36/317 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H + +T+ G ++ G G+LG + NI +P I L ++ ++
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 353
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+T+ G+LY WGK G LG G + + +P L GI A G +
Sbjct: 354 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 412
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG + S+ + PR + L+G++ AA G H
Sbjct: 413 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 463
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK GN + P+ ++ L P +V
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 521
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D +P RV+G +S V++++CG H
Sbjct: 522 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIACGAYHV 580
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 581 AVLTSRTEVYTWGKGSN 597
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 30/219 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 285 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 335
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-----RRP 281
P+LI L +++ A G HS + +G +Y +G D + GN +R
Sbjct: 336 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 393
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + + CG YHT V+TS G+L+T+G G LG G + P V
Sbjct: 394 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLR 453
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GK+ TWG G
Sbjct: 454 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 491
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+ + + G + +G+ + ++ ++ ++P LI L
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
+ E V CG +H+C +T G+LYTWG + G LG G+ +V H P+RV V
Sbjct: 346 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 404
Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
++CG HTA + S G++ T+G GTF GH
Sbjct: 405 IACGPYHTAVVTSAGQLFTFG----DGTFGVLGH 434
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555
Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ Q GN HA + P+ + KL + EE+ CG YH VLTS E+YTWG NG LG
Sbjct: 556 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G +D +SP V+ + V ++CG TAA+
Sbjct: 616 GDVDDRNSPTLVES-LKDKQVKSIACGTNFTAAV 648
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 156/317 (49%), Gaps = 36/317 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H + +T+ G ++ G G+LG + NI +P I L ++ ++
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 366
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+T+ G+LY WGK G LG G + + +P L GI A G +
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 425
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG + S+ + PR + L+G++ AA G H
Sbjct: 426 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 476
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK GN + P+ ++ L P +V
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D +P RV+G +S V++++CG H
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIACGAYHV 593
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 594 AVLTSRTEVYTWGKGSN 610
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 30/219 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-----RRP 281
P+LI L +++ A G HS + +G +Y +G D + GN +R
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + + CG YHT V+TS G+L+T+G G LG G + P V
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLR 466
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GK+ TWG G
Sbjct: 467 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 504
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+ + + G + +G+ + ++ ++ ++P LI L
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
+ E V CG +H+C +T G+LYTWG + G LG G+ +V H P+RV V
Sbjct: 359 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 417
Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
++CG HTA + S G++ T+G GTF GH
Sbjct: 418 IACGPYHTAVVTSAGQLFTFG----DGTFGVLGH 447
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 156/340 (45%), Gaps = 31/340 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG + S F S++++A G + L + G V+ GLN GQ
Sbjct: 3139 GQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQC 3198
Query: 104 GISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GI + P I SG+ +V S G H AI+ DG +Y WG N GQLGLG
Sbjct: 3199 GIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTT 3258
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P +E L F AA+ + S V+ G +L++G SG+LG H Q
Sbjct: 3259 VSKS-HTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQH--- 3314
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+L++ L KV A G H+ I ++G VY FG ++ +
Sbjct: 3315 --------QHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQN 3366
Query: 278 ARRPSLISKLPYSE-----------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ P L+ P +V CG YHT + G++ TWG N+ G LGIGS +
Sbjct: 3367 TKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKE 3426
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 365
+ V P + S V + SCG HT + G+ + +G
Sbjct: 3427 HKSIAQFVPLPLT-SRVKRASCGCYHTLLLLVNGRPMVFG 3465
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGK 149
+++ G N++G+L + N LE R S + +Q I+ G + DG ++ G
Sbjct: 3135 IFSCGQNNYGELCLGHCNPTNKLE--RASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGL 3192
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
N +GQ G+G ++I +P+ + LSGI A G E +A++ G V SWG G
Sbjct: 3193 NKSGQCGIGNFDERLI-VPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRG 3251
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG G S +TPR+I+ L E + AA + HSA + NG + FG
Sbjct: 3252 QLGLGTTVS--------KSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMND 3303
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ H P L+ L + V CG YHT + G++Y++G NE G LG+
Sbjct: 3304 SGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363
Query: 325 IDVLHSPERVQ-GPFSESPV-------DQVSCGWKHTAAISE-GKILTWG 365
P V+ P +P+ QV CG+ HT I E GK++TWG
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWG 3413
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 138/283 (48%), Gaps = 18/283 (6%)
Query: 90 GCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G +Y+ G N +G+LG+ ++I + L + + G + Q+ +G + +T DG + G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWD-HIRQVVSGNEILAILTSDGVVLTCG 406
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGS 206
N +GQ G G +V+ + ++ L K A+ G E +A+T G SWG
Sbjct: 407 LNKSGQCGHGNFDERVMLL-RPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + L Y P+LI+ ++ K+K AA + HSA + +G +Y FG
Sbjct: 466 GQLGHENVGTKL--------YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMND 517
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ H P L+ L + V CG YH + T GE++T G N++G LG+G
Sbjct: 518 CGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGH 577
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+ P +V P V V+CG+ H AI+ LT+ +G
Sbjct: 578 NKQVKVPTQVVLP--NELVCFVACGYYHATAITSTG-LTYSFG 617
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 146/323 (45%), Gaps = 26/323 (8%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G G+ + R RP+ A H +K + + G H + +T+TG Y+ G ND GQL
Sbjct: 411 GQCGHGNFDERVMLLRPI--QALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQL 468
Query: 104 GISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G EN+G L P I +K K++ + YHHS+ ++V GELY +G N GQLGL
Sbjct: 469 G-HENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQ 527
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V+ L G + G V T G+V + G G+LG G +
Sbjct: 528 HQ--STPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQV---- 581
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + L V A G+ H+ I G Y FG ++ H P
Sbjct: 582 -----KVPTQVV-LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIP 635
Query: 282 SLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG-IGSID-VLHSPERVQGP 337
++ + V CG YHT +++ G+++ +G N G LG G+ D +L P +V+
Sbjct: 636 IALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPE 695
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ ++ G+ T+ I E K
Sbjct: 696 KNMRRCLHIAAGFYTTSLIVERK 718
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 133/287 (46%), Gaps = 17/287 (5%)
Query: 49 GRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G+G+ + R P+ + ++ A + G H L ++ G VY+ G ND GQLG+
Sbjct: 3196 GQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGL 3255
Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ S P I L+++ + + YHHS+ ++ +G+L +G N +GQLGL +
Sbjct: 3256 GTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQ 3315
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFL 221
P VE LS + A G +VA+ G V S+G G+LG H Q + + +
Sbjct: 3316 --HTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLV 3373
Query: 222 R-STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + TP L + V+V G+ H+ I E G+V +G ++ H
Sbjct: 3374 KIPPAPRTPMLDAVNKAVQV---YCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSI 3430
Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ LP + V CG YHT +L G +G N G LG+ S
Sbjct: 3431 AQFV-PLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVAS 3476
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 145/342 (42%), Gaps = 46/342 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHT----------LFLTETGCV 92
G YG LGLG E+H L ++ CG H LT G V
Sbjct: 354 GQNSYGELGLGD-----------DIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVV 402
Query: 93 YATGLNDFGQLG---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
GLN GQ G E + L P++ + + + + S G H AIT G Y WG
Sbjct: 403 LTCGLNKSGQCGHGNFDERVML-LRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWG 461
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N GQLG K+ +P +E + K AA+ + S V+ G++ ++G G+
Sbjct: 462 YNDRGQLGHENVGTKLY-LPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQ 520
Query: 209 LG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
LG H Q S TP+L+K L G V + + G H +G V+ G
Sbjct: 521 LGLDHTQHQS-----------TPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKND 569
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + P+ + LP V CG YH +TS G Y++G N+ G LGIGS
Sbjct: 570 HGQLGLGHNKQVKVPTQVV-LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGS 628
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P + S + + +CG HT +S+ G++ +G
Sbjct: 629 KIHQNIPIALTIS-SNTRMVHAACGCYHTLLMSDSGQVFVFG 669
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLG+ S+ V+ S EK+ + A H+ ++ G + G+ND
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L + V +++ G +H+ AI DG++Y +GKN GQLGL
Sbjct: 3305 GQLGL-DHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363
Query: 160 KAAKVIPIPTKV------ECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+P+ K+ L + Q G+ +V + GKV++WG G+LG G
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ +S +++ P + +VK A+ G H+ + NGR +FG
Sbjct: 3424 SKEH-----KSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFG 3465
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 18/264 (6%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESR- 59
ML R + A+ + +K + + G C+ I+ T A WG D G+LG ++ ++
Sbjct: 423 MLLRPIQALRSHRVKY---INASNG-CEHLIAIT-DTGLAYSWGYNDRGQLGHENVGTKL 477
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+ P + + ++ +K+ A H+ ++ +G +Y G+ND GQLG+ S L +
Sbjct: 478 YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKA 537
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L V +S G +H T+ GE++ GKN +GQLGLG K + +PT+V L
Sbjct: 538 LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN--KQVKVPTQV-VLPNELV 594
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G+ + A+T G S+G G+LG G + + P + +
Sbjct: 595 CFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK---------IHQNIPIALTISSNTR 645
Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
+ AA G H+ + ++G+V++FG
Sbjct: 646 MVHAACGCYHTLLMSDSGQVFVFG 669
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LGL + + P + + +ACG HT+ + + G VY+ G N++GQ
Sbjct: 3299 FGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQ 3358
Query: 103 LGISENIGYSLEPL-------RISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LG+S + L R L + VQ+ GY+H+ I G++ WG+N G
Sbjct: 3359 LGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYG 3418
Query: 154 QLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
QLG+G K A+ +P+P K+A+ G ++ + G+ + +G G+L
Sbjct: 3419 QLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLVNGRPMVFGRNNKGQL 3472
Query: 210 GHGQES 215
G S
Sbjct: 3473 GVASRS 3478
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D+G+LGLG + P + +ACG H +T TG Y+ G ND+GQL
Sbjct: 566 GKNDHGQLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQL 624
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI I ++ +V + G +H+ ++ G+++++G+N+ GQLG
Sbjct: 625 GIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDS 684
Query: 164 VIPIPTKV 171
++P+P KV
Sbjct: 685 LLPVPLKV 692
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L E +V ++ G HS A++ G+L+ WG S+GQLGL + + +P ++ L+
Sbjct: 81 LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEESVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRAQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 137/287 (47%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T E PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ + S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKL-LRAQKVVYISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G H+ A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGL-MTTEDAVAVPRVIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G S+A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G ++A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PR+I++L + + G HS + +G+ + +G + ++
Sbjct: 118 ----LMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ + S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 20/332 (6%)
Query: 43 WGNGDYGRLGLG-SLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LG G SL++ P C+ +K +ACGG HTLFL E G VY+ G N
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG S P ++ L +E + I+ G HS A+++ G LY WG ++GQLG
Sbjct: 64 GQLGHSHE---GTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG-HA 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
IP ++ LS +Q + G + +A+ G++ +WG G+LG G G
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGN-----G 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F+ S+ +P+ +K LEG+ + AG HS + +G V+ +G + ++ +
Sbjct: 175 FI---SQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKE 231
Query: 280 RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L + V CG HT +LT G L+T+G+ +G LG S+ +P RV
Sbjct: 232 TPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVL-E 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
S V Q++CG KHT A S G + +G G
Sbjct: 291 LMGSEVSQIACGRKHTLAFVPSSGTLYAFGCG 322
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 135/280 (48%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P + + +K +ACG +H+L L+ G +Y+ G + GQLG + YS P I
Sbjct: 74 HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKK 133
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++++ Q+S G H A+ DG+L+ WG+N++GQLGLG P KV+ L GI
Sbjct: 134 LSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSS-PQKVKSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q G S A++ G V WG +G+LG E + TP +K L K
Sbjct: 193 AQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQV---------KETPCHVKPLRTHK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + + G ++ FG ++ ++ P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
HT S G LY +G + G LG G + + P V+G
Sbjct: 304 KHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVKG 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 15/178 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG+G + SE P VK A G H+ + E+G
Sbjct: 1 MLCWGHSAFGQLGNGH-----SLKNAVSE--PCACTFSLATCVKEVACGGKHTLFLMEDG 53
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
+VY G ++ EG H P+ ++ L + + + CG H+ L+ G LY+WG+
Sbjct: 54 QVYSCGWNGEGQLGHSHEGTH---PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGA 110
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
+G LG +++ R+ S+ + Q+SCG H A+ +G++ TWG +HG
Sbjct: 111 GNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWG-QNTHG 167
>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 383
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 173/337 (51%), Gaps = 24/337 (7%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE 114
S +RP + ++ + S++ +ACG TLF+T+ G VY++G+ +GQLG + E G +L
Sbjct: 19 SVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL- 77
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
I + ++V+ + G HS +T G LY G G+LGLG ++ + P VE L
Sbjct: 78 ---IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESL 133
Query: 175 SGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSE 226
+ K + A G S+A++ GKV S+G+ G LGHG+ + FL E
Sbjct: 134 AREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNME 192
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
+PRLI+ LE +++ + G H+ I++ G + +G + +P +
Sbjct: 193 TSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252
Query: 287 LPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF---SESP 342
LP +++V GG HT LT GG+++ WG N GCLG+G R+ ++ P
Sbjct: 253 LPGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEP 312
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSED 376
+ ++ GW + A+ SEG + +WG G G+ GT E+
Sbjct: 313 IQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEE 349
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQ-IS 129
K + GGAHTL LT+ G V+A G+N FG LG+ E EP + L KE +Q I+
Sbjct: 258 KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIA 317
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G+ S A+ +G +Y WG+ G LG G++ K P+ + E + + GF +
Sbjct: 318 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 377
Query: 190 VAV 192
+AV
Sbjct: 378 IAV 380
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+TS Y P+++ L+ ++ A G + + + G+VY G ++ +
Sbjct: 17 ATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGIT 76
Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHSPERVQG-P 337
LI +P E+V+ G H+ +T G LY+ G + G LG+G+I + +P+ V+
Sbjct: 77 LIDSIP--EKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLA 134
Query: 338 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
E + +V+ G + A+SE GK+ ++G + DGH G++ G
Sbjct: 135 REEEKIIKVAAGHGFSIALSESGKVYSFG-------SANDGHLGHGEVPGG 178
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 164/327 (50%), Gaps = 30/327 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV + A+A G AH+L + G V+A G N GQ
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV ++ G+HHS A+ DG ++ WG+N + QLG K +
Sbjct: 230 LGDGTTTDR-LVPVQVQGLSG-VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KGS 284
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P +V+ LS + A G S+AV G V + G+ +G+LG G
Sbjct: 285 MRLLVPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQLGDG---------- 332
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T+ Y + L GV V +AA + HS + +G V+ +G + ++ +G R
Sbjct: 333 -TTTYRLVPVPVLSGV-VSVAANDY-HSLAVRSDGTVWAWGYNSTGQL--GDGTTTTRLV 387
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P +S L VV GGYH+ + S G + WGSN G LG GS L P RVQ
Sbjct: 388 PVQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQ---QL 444
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGW 366
S V V+ G H+ A+ S+G + TWG+
Sbjct: 445 SGVGAVASGSSHSLALRSDGTVWTWGY 471
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 162/350 (46%), Gaps = 36/350 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ PV + A+ G +H+L + G V+A G N GQ
Sbjct: 20 WGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVRSDGTVWAWGSNASGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S P+++ GL V+ ++ G H A+ DG ++ WG NS+GQ G G
Sbjct: 80 LGDETTISRS-TPVQVLGLSG-VLFVAAGSSHVLALRYDGTVWAWGSNSSGQRGDGTTNN 137
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + + LSG+ A G S+AV G +WG+ SG+LG G S
Sbjct: 138 RALPV--QAQGLSGVMA--VAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTS------- 186
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+ P ++ L GV AAG HS + +G V+ +G A ++ +G R
Sbjct: 187 --NRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGANASGQL--GDGTTTDRLV 240
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + L V G +H+ + + G ++ WG N++ LG GS+ +L P +VQG
Sbjct: 241 PVQVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLL-VPAQVQG---L 296
Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
S V V+ G H+ A+ GS GT G ++ GQL G T
Sbjct: 297 SAVVAVAAGDTHSLAV-----------GSDGTVWAVGSNNNGQLGDGTTT 335
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 27/296 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
+A G +H+L L G V+A G N GQLG + P+++ GL EVV + G H
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLS-EVVAVDAGSSH 59
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ DG ++ WG N++GQLG ++ P+ +V LSG+ A G +A+
Sbjct: 60 SLAVRSDGTVWAWGSNASGQLGDETTISRSTPV--QVLGLSGVLF--VAAGSSHVLALRY 115
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG+ SG+ G G + + P + L GV AAG HS +
Sbjct: 116 DGTVWAWGSNSSGQRGDGT---------TNNRALPVQAQGLSGVMA--VAAGDNHSLAVR 164
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+G + +G A ++ EG + RP + L V G H+ + S G ++ W
Sbjct: 165 SDGSAWAWGSNASGQL--GEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAW 222
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
G+N +G LG G+ P +VQG S V V+ G H+ A+ ++G + WGWG
Sbjct: 223 GANASGQLGDGTTTDRLVPVQVQG---LSGVVAVAAGHHHSLAVRNDGTV--WGWG 273
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ + G+LG G+ R PV + ++A H+L + G V+A G N GQL
Sbjct: 322 GSNNNGQLGDGTTTYRLVPVPV----LSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQL 377
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G L P+++SGL EVV + G +HS A+ DG + WG N+ GQLG G
Sbjct: 378 GDGTTT-TRLVPVQVSGLS-EVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGST--T 433
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P+P +V+ LSG+ A G S+A+ G V +WG G+LG+G + +RS
Sbjct: 434 YLPVPVRVQQLSGV--GAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGPPLNTATVIRS 491
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + + ++ GG H+L + G + G N +GQ
Sbjct: 369 WGYNSTGQLGDGTTTTRLVPVQVSGLSE--VVSVVAGGYHSLAVRSDGSAWDWGSNAYGQ 426
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--K 160
LG Y P+R+ L V +++G HS A+ DG ++ WG NS GQLG G
Sbjct: 427 LGDGSTT-YLPVPVRVQQLSG-VGAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGPPLN 484
Query: 161 AAKVI 165
A VI
Sbjct: 485 TATVI 489
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 170/333 (51%), Gaps = 22/333 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G EP+ ++G + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGSKPEPIGALAG--QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + KL S++VV CG HT VLT G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
S V Q++CG HT A S G I +G G
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 16/292 (5%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG S S+ P+ A + +ACG +H++ L++ G V++ G GQLG++
Sbjct: 64 GQLGHESEGSKPEPI--GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P I L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V+ L GI Q A G S A++ G V WG SG+LG E
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRE 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+P +K L KV + G H+A + ++G V+ FG + ++ N P + +L
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 288 PYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
SE ++ CG +HT S G +Y +G G LG G + P V+G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 22/288 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + FGQ GI N+ + ++ G + V +++ G +HS + DGE+Y G N+ G
Sbjct: 5 GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + +K P + L+G A G SVA++ G+V SWGAG G+LG
Sbjct: 65 QLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
+ PRLIK+L + + G H + +G+ + +G + ++ L
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+E P + L P ++ V GG H+ L+ G ++ WG N +G LG+
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
SP V+ S+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+ G G ++ E P++ + VK A G HS + E+G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVI-----IPE--PQVYGFIHDRNVKEVACGGNHSVFLLEDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY G ++ + +P I L + V CG H+ L+ G++++WG+
Sbjct: 54 EVYTCGLNTKGQL--GHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFS 374
+G LG+ +I+ + R+ ++ + Q+SCG W A ++G+ TW
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTW---------- 161
Query: 375 EDGHSSGGQLDRGQLTPSE 393
G +S GQL G+ PS+
Sbjct: 162 --GQNSYGQLGLGKECPSQ 178
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555
Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ Q GN HA + P+ + KL + EE+ CG YH VLTS E+YTWG NG LG
Sbjct: 556 PVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G +D +SP V+ + V ++CG TAA+
Sbjct: 616 GDVDDRNSPTLVES-LKDKQVKSIACGTNFTAAV 648
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 155/317 (48%), Gaps = 36/317 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H + +T+ G ++ G G+LG + NI +P I L ++ ++
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 366
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+T+ G+LY WGK G LG G + + +P L GI A G +
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 425
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG + S+ + PR + L+G++ AA G H
Sbjct: 426 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 476
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK GN + P+ ++ L P +V
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D P RV+G +S V++++CG H
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KLPNRVEGKLHKSFVEEIACGAYHV 593
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 594 AVLTSRTEVYTWGKGSN 610
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 30/219 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-----RRP 281
P+LI L +++ A G HS + +G +Y +G D + GN +R
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + + CG YHT V+TS G+L+T+G G LG G + P V
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLR 466
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GK+ TWG G
Sbjct: 467 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 504
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+ + + G + +G+ + ++ ++ ++P LI L
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
+ E V CG +H+C +T G+LYTWG + G LG G+ +V H P+RV V
Sbjct: 359 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 417
Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
++CG HTA + S G++ T+G GTF GH
Sbjct: 418 IACGPYHTAVVTSAGQLFTFG----DGTFGVLGH 447
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 169/339 (49%), Gaps = 24/339 (7%)
Query: 43 WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG G G LGL + +P F +++ +ACG HTL L G VY+
Sbjct: 56 WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 115
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G NDFGQLG ++ LE +++ L E+ ++ G HS A++ G+++ WG N NGQ
Sbjct: 116 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 172
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P ++ L+ + Q A G +A+ G++ SWG SG+LG G++
Sbjct: 173 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 231
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + +E PR + L GV + + A G +HS + +G V+++G + ++ +
Sbjct: 232 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 284
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
P+++ L + V CG HT LT+ G ++T+G+ G LG G + V +
Sbjct: 285 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG-VKVNEAVP 343
Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS--EGKILTWGWGGS 369
R + + Q+SCG HT A + G++ +G G S
Sbjct: 344 RRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 382
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 15/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D+G+LG + V +A H ++A+ACG AH+L L++ G V++ G N GQL
Sbjct: 116 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 173
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G L P I L +VQI+ G H A+ +GEL+ WG N++GQLGLG+ +
Sbjct: 174 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 233
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V L G+ A G SV +T G V WG G+LG + L
Sbjct: 234 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 290
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++K L ++K G H+A + +G V+ FG ++ + P
Sbjct: 291 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 344
Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L ++ CG HT G LY +G +G LG G+++ P V G
Sbjct: 345 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 401
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 23/233 (9%)
Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
LY WG NG+LGL G + P +V ++ A G + ++ + G V
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
S GA G+LG + +R + + L +++ A G HS + + G+
Sbjct: 113 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 161
Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G +R E RP +I KL + ++ CG H L + GEL++WG N
Sbjct: 162 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 221
Query: 316 ENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+G LG+G S P RV P+ V+CG H+ ++ G + WG
Sbjct: 222 ASGQLGLGRDSTGNERLPRRVSH-LVGVPLALVACGAMHSVGLTPSGTVFVWG 273
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGL R P V +K + CG HT LT G V+ G +G
Sbjct: 271 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 330
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
QLG + ++ + + + Q+S G H+ A G LY++G +GQLG G
Sbjct: 331 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 390
Query: 161 AAKVIPI 167
+ +P+
Sbjct: 391 ESSALPV 397
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G +G LG Q G T P ++ V+ A G H+ + NG V
Sbjct: 55 SWGLGPNGELGLTQGKD--GVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y G A D + R+ ++ L E V CG H+ L+ G++++WG N N
Sbjct: 113 YSCG--ANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRN 170
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
G LG G+ + +V + + Q++CG H A++ G++ +WG S
Sbjct: 171 GQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNAS 223
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 162/327 (49%), Gaps = 29/327 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+ G GS ++ PV +A +A G AH L + G V+A G N FGQ
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALSGG--FTVAAGKAHALAVRSDGTVWAWGQNLFGQ 413
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++++GL V ++ G HS + +DG ++ WG+N++GQLG G A
Sbjct: 414 LGDGTRM-QRTAPVQVTGLSGGVA-VAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQ 471
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V LSG+ A G S+AV+ G V +WG+ SG+LG G + L
Sbjct: 472 R--PAPVQVTELSGVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARL---- 523
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARR 280
TP + L GV AAG+ HS + +G V+ +G+ + FQ +G + +R
Sbjct: 524 -----TPVQVAGLSGVVA--VAAGYFHSLAVRSDGTVWAWGNNS----FFQLGDGTNTQR 572
Query: 281 PS--LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P+ + L G +H+ VL S G ++ WG+N G LG G+ + SP +V G
Sbjct: 573 PTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGL- 631
Query: 339 SESPVDQVSCGWKHTAAISEGKILTWG 365
V + ++ A S+G + WG
Sbjct: 632 -SGGVAVAAGDFQSLAVRSDGTVRAWG 657
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 156/331 (47%), Gaps = 37/331 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ R RPV + + +A+A G H+L + G V+A G N GQ
Sbjct: 106 WGHNGSGELGDGTTFRRTRPVQVTGLSE--AEAVAAGDGHSLVVRSDGTVWAWGWNSDGQ 163
Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG G + E P++++GL V+++ G HS A+ +DG ++ WG+N +GQLG G
Sbjct: 164 LG----DGTTRERHVPVQVAGLSGG-VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT 218
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +V LSG+ A G S+AV G V +WG G+LG G S+ L
Sbjct: 219 TVQRSAPV--QVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL- 273
Query: 220 FLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
TP + L GV V AAG HS + +G V+ +G ++ +
Sbjct: 274 --------TPVQVTGLSGGVAV---AAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTAS 322
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---Q 335
P L E V G H+ V S G ++ WG+N G G GS +P +V
Sbjct: 323 LTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALS 382
Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G F+ V+ G H A+ S+G + WG
Sbjct: 383 GGFT------VAAGKAHALAVRSDGTVWAWG 407
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 139/294 (47%), Gaps = 19/294 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV + A+A G H+L L G V+A G N GQ
Sbjct: 406 WGQNLFGQLGDGTRMQRTAPVQVTGLSGG--VAVAAGDDHSLGLCLDGTVWAWGQNTSGQ 463
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P++++ L VV ++ G HS A++ DG ++ WG N++GQLG G A
Sbjct: 464 LG-DGTTAQRPAPVQVTELSG-VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRA 521
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG+ A G+ S+AV G V +WG +LG G
Sbjct: 522 RLTPV--QVAGLSGVVA--VAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTN-------- 569
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L G AAAG+ HS + +G V+ +G+ A ++ N + P
Sbjct: 570 -TQRPTPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPV 626
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
++ L V G + + + S G + WG N G LG G++ +P V G
Sbjct: 627 QVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPVGVNG 680
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 140/295 (47%), Gaps = 21/295 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + +K +A G H+L + G V+A G ND GQ
Sbjct: 156 WGWNSDGQLGDGTTRERHVPVQVAGLSG-GVK-VAAGDGHSLAVCLDGTVWAWGRNDSGQ 213
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P++++GL VV ++ G HS A+ DG ++ WG+NS+GQLG G +A
Sbjct: 214 LGDGTTVQRS-APVQVAGLSG-VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSA 271
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG A G S+AV G V +WG G+LG G
Sbjct: 272 RLTPV--QVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSM-------- 319
Query: 223 STSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ TP + I EG V AAG HS +G V+ +G+ + + P
Sbjct: 320 -TASLTPVQAIGLSEGEAV---AAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
++ L V G H + S G ++ WG N G LG G+ +P +V G
Sbjct: 376 VQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTG 430
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + E + A+A G +H+L ++ G V+A G N GQ
Sbjct: 456 WGQNTSGQLGDGTTAQRPAPVQVT--ELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQ 513
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P++++GL VV ++ GY HS A+ DG ++ WG NS QLG G
Sbjct: 514 LGDGTTRAR-LTPVQVAGLSG-VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQ 571
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V LSG AA G+ S+ + G V WG G+LG+G
Sbjct: 572 R--PTPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGT--------- 618
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+ + ++P + L G V +AA F S + +G V +GD ++ +G R
Sbjct: 619 ANASFSPVQVTGLSG-GVAVAAGDF-QSLAVRSDGTVRAWGDNIYGQL--GDGTVTTRLA 674
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
P ++ L V G + + SGG L+ WG N +G LG G V
Sbjct: 675 PVGVNGLSGGMAVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHGGPSV 721
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 25/324 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ R P L +A G +H+L + G +A G N G+L
Sbjct: 57 GSNTSGQLGDGTTSERRVPAQVVGLSDAVL--VAAGSSHSLAIRSDGTAWAWGHNGSGEL 114
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G P++++GL E ++ G HS + DG ++ WG NS+GQLG G +
Sbjct: 115 GDGTTF-RRTRPVQVTGLS-EAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRER 172
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P+ +V LSG + A G S+AV G V +WG SG+LG G +
Sbjct: 173 HVPV--QVAGLSGGV--KVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT---------T 219
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPS 282
P + L GV AAG HS + +G V+ +G R D L AR P
Sbjct: 220 VQRSAPVQVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWG-RNSDGQLGDGTTSARLTPV 276
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++ L V G +H+ + S G ++ WG N G LG GS+ +P + G SE
Sbjct: 277 QVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAIG-LSEG- 334
Query: 343 VDQVSCGWKHT-AAISEGKILTWG 365
+ V+ G H+ A S+G + WG
Sbjct: 335 -EAVAAGETHSLVARSDGTVWAWG 357
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 145/321 (45%), Gaps = 39/321 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA GG+H+L + G V+A G N GQLG + P ++ GL V+ ++ G HS
Sbjct: 37 LAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRV-PAQVVGLSDAVL-VAAGSSHS 94
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
AI DG + WG N +G+LG G + P+ +V LS + A G S+ V
Sbjct: 95 LAIRSDGTAWAWGHNGSGELGDGTTFRRTRPV--QVTGLS--EAEAVAAGDGHSLVVRSD 150
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACID 254
G V +WG G+LG G + + P + L GVKV AAG HS +
Sbjct: 151 GTVWAWGWNSDGQLGDGT---------TRERHVPVQVAGLSGGVKV---AAGDGHSLAVC 198
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+G V+ +G D +G +R P ++ L V G H+ + S G ++ W
Sbjct: 199 LDGTVWAWGRN--DSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAW 256
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G N +G LG G+ +P +V G S V+ G H+ A+ S+G + W
Sbjct: 257 GRNSDGQLGDGTTSARLTPVQVTG---LSGGVAVAAGMFHSLAVRSDGTVWAW------- 306
Query: 372 TFSEDGHSSGGQLDRGQLTPS 392
G ++ GQL G +T S
Sbjct: 307 -----GQNTRGQLGDGSMTAS 322
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+++ G HS AI DG ++ G N++GQLG G + + +P +V LS A G
Sbjct: 36 RLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSER--RVPAQVVGLSDAVL--VAAGS 91
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G +WG GSG LG G R T + E E V AAG
Sbjct: 92 SHSLAIRSDGTAWAWGHNGSGELGDGTT------FRRTRPVQVTGLSEAEAV-----AAG 140
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
HS + +G V+ +G + ++ P ++ L +V G H+ +
Sbjct: 141 DGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGGVKVAAGDGHSLAVCLD 200
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G ++ WG N++G LG G+ +P +V G S V V+ G H+ A+ S+G + WG
Sbjct: 201 GTVWAWGRNDSGQLGDGTTVQRSAPVQVAG---LSGVVAVAAGSSHSLAVRSDGTVWAWG 257
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 160/313 (51%), Gaps = 20/313 (6%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I L
Sbjct: 479 PQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGAL 535
Query: 122 -KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+ +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 536 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLIQKLNQQTIL 594
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+ +
Sbjct: 595 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIPL 646
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGG 297
AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 647 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCGE 705
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 706 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFV 764
Query: 357 -SEGKILTWGWGG 368
S G I +G G
Sbjct: 765 PSSGLIYAFGCGA 777
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 463 LGQPGISSNLQGIVAEP-QVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 521
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 522 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 571
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 572 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 627
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 628 EFPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 686
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 687 PCHVKL-LRTQKVVYISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 731
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 668 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 727
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 728 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 786
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 787 CNVKCPSPVK 796
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 103 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 159
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 160 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 218
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 219 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 270
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 271 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 329
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 330 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 388
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 389 VPSSGLIYAFGCGA 402
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 88 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 146
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 147 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 196
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 197 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 252
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ + S
Sbjct: 253 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 311
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 312 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 356
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 17/258 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R++ L V Q + +S + + WG S GQ G+ ++ P +S
Sbjct: 53 RVTCLGDSVAQWIRLWTLASGLDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD 112
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
K+ A G SV + G+V + G G+LGH +E + P I L
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN-----------KPEQIGALA 161
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EV 293
+ A G HS + + G+++ +G + ++ L + P LI KL +V
Sbjct: 162 DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 221
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKH 352
CG +H L + G+ +TWG N +G LG+G SP+RV+ P+ QV+ G H
Sbjct: 222 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAH 280
Query: 353 TAAIS-EGKILTWGWGGS 369
+ A+S G + WG +
Sbjct: 281 SFALSLSGAVFGWGMNNA 298
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 293 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 352
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 353 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 411
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 412 CNVKCPSPVK 421
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 165/323 (51%), Gaps = 39/323 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3649
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3650 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3708
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P ++ A G ++AV+ G ++ ++G G G+LG G
Sbjct: 3709 TSNKKLP-------------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3750
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3751 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3806
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
RP + L E+V G HT L S G++Y WGSN G LG+G + + P V
Sbjct: 3807 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 3865
Query: 335 --QGPFSESPVDQVSCGWKHTAA 355
QG V Q+S G H+AA
Sbjct: 3866 VLQG----KNVRQISAGRCHSAA 3884
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 545 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 711 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 23/246 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3644 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3703
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKKA 161
LG+ KK +++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 3704 LGLGNTSN-----------KKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3752
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3753 AK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG--------- 3801
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R P
Sbjct: 3802 RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 3861
Query: 282 SLISKL 287
+L++ L
Sbjct: 3862 TLVTVL 3867
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 420
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 480
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 481 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 531
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 532 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 591
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 592 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 643
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3511 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3566
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3567 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3616
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 3617 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3675
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG H+ V+TS G+L+T+G+ + G LG+G+ PERV +CG
Sbjct: 3676 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERV------------ACGLN 3723
Query: 352 HTAAISEGKILTWGWG-GSHGTF 373
HT A+S + W +G G +G
Sbjct: 3724 HTLAVSADGSMVWAFGDGDYGKL 3746
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 527 DGELYTWG----EGDFGRLGH 543
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 69 EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117
Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG ++ +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HVREGNKPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HVREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS+G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSYGQLGHD 277
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL 287
P++ + VK A G HS + E+G VY G ++ +EGN +P I L
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN---KPEQIGAL 81
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
V CG H+ L+ G+L++WG+ +G LG+ + + + R+ ++ + Q
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 346 VSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
VSCG W A S+G+ TWG +S GQL G+ PS+
Sbjct: 142 VSCGNWHCLALASDGQFFTWG------------KNSHGQLGLGKEFPSQ 178
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 22/333 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + KL S++VV CG HT VLT G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
S V Q++CG HT A S G I +G G
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 22/288 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + +GQ GI N+ + ++ G + V +++ G +HS + DGE+Y G N+ G
Sbjct: 5 GYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + +K P ++ L+G A G SVA++ G++ SWGAG G+LG
Sbjct: 65 QLGHDCEGSK----PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT 120
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
+ PRLIK+L + + G H + +G+ + +G + ++ L
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+E P + L P ++ V GG H+ L+ G ++ WG N +G LG+
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
SP V+ S+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+ G G ++ E P++ + VK A G HS + E+G
Sbjct: 1 MLCWGYSSYGQPGIGSNLQVI-----IPE--PQVYGFIHDRNVKEVACGGNHSVFLLEDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY G ++ +P I L + V CG H+ L+ G+L++WG+
Sbjct: 54 EVYTCGLNTKGQL--GHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAG 111
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFS 374
+G LG+ +I+ + R+ ++ + QVSCG W A ++G+ TW
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTW---------- 161
Query: 375 EDGHSSGGQLDRGQLTPSE 393
G +S GQL G+ PS+
Sbjct: 162 --GQNSYGQLGLGKECPSQ 178
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 69 EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117
Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 155/333 (46%), Gaps = 29/333 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG GS PV S + A+A GG HT LT +G V G N GQ
Sbjct: 230 WGGNNYGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVRCWGANYSGQ 288
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S P +SGL V I+ G +H+ A+T G ++ WG N +GQLG G A
Sbjct: 289 LGNGLTFGRS-TPGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTA 347
Query: 163 KVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P+ P+ VE + A G + A+ G V WG G+LG G
Sbjct: 348 RSTPVAVSGLPSGVETI--------AAGDYHTCALMSSGGVRCWGHNDRGQLGDGT---- 395
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T+ TP + L V AAG LH+ +G V+ +GD + ++
Sbjct: 396 -----TTARSTPVAVSGLP-SGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTD 449
Query: 278 ARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ P +S L E + GG+HTC LT G ++ WG N +G LG GS +P V G
Sbjct: 450 SSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSG 509
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
S V ++ G HT A++ G W WGG+
Sbjct: 510 --LPSGVTAIAAGGVHTCALT-GSGGVWCWGGN 539
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 156/352 (44%), Gaps = 35/352 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+GRLG GS PV S + A+A GGAHT LT +G V+ G N +GQ
Sbjct: 77 WGGNDFGRLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGEVWCWGSNFYGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G ++ WG N GQLG G
Sbjct: 136 LGDGSYTTRS-TPVAVSGLPSGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTD 194
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ ++ A+ G + A G+V WG G+LG G
Sbjct: 195 RSTPVA-----VSGLPSEVTAIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSY------ 243
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T TP + L IAA G +H+ + +G V +G ++
Sbjct: 244 ---TDSSTPVAVSGLPSGVTAIAAGG-VHTCALTGSGGVRCWGANYSGQLGNGLTFGRST 299
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P +S LP + G YHTC LT G ++ WG N +G LG G+ +P V G
Sbjct: 300 PGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSG--L 357
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
S V+ ++ G HT A+ S G + W GH+ GQL G T
Sbjct: 358 PSGVETIAAGDYHTCALMSSGGVRCW------------GHNDRGQLGDGTTT 397
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 156/326 (47%), Gaps = 22/326 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS PV S ++ +A GG HT LT +G V+ G N+ GQ
Sbjct: 434 WGDNSDGQLGDGSFTDSSTPVAVSGLAS-GVETIAAGGWHTCALTGSGGVWCWGRNNSGQ 492
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I Y + P+ +SGL V I+ G H+ A+T G ++ WG N GQLG G
Sbjct: 493 LGDGSTI-YHITPVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTD 551
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G V WG G+LG G
Sbjct: 552 RSTPV--AVSGLPSGVTAIAA-GDIHTCALTGSGGVWCWGGNDFGQLGDGT--------- 599
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-P 281
+T+ TP + L V AAG ++ + +G V+ +G ++ +G +R P
Sbjct: 600 TTNRSTPVAVSGLP-SGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQL--DDGTTSRSTP 656
Query: 282 SLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
+S LP + GG++TC TS G + WG+N +G LG G+ +P V G
Sbjct: 657 VAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSG--LP 714
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
S V ++ G +HT A+ S G + WG
Sbjct: 715 SGVTAIAAGGEHTCALMSSGGVWCWG 740
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 152/329 (46%), Gaps = 20/329 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G+ +R PV S + A+A G HT T +G V+ G N GQ
Sbjct: 383 WGHNDRGQLGDGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQ 441
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+ +SGL V I+ G H+ A+T G ++ WG+N++GQLG G
Sbjct: 442 LG-DGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIY 500
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G V WG +G+LG G
Sbjct: 501 HITPV--AVSGLPSGVTAIAAGGV-HTCALTGSGGVWCWGGNFAGQLGDGT--------- 548
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L V AAG +H+ + +G V+ +G ++ + P
Sbjct: 549 TTDRSTPVAVSGLP-SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPV 607
Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSE 340
+S LP + G +TC LT G ++ WG N +G L G+ +P V G P
Sbjct: 608 AVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTS-RSTPVAVSGLPSGV 666
Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGS 369
+ + + GW A S G + WG GS
Sbjct: 667 TAI--AAGGWYTCARTSSGGVRCWGANGS 693
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 141/307 (45%), Gaps = 19/307 (6%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A GG HT T +G V+ G NDFG+LG S P+ +SGL
Sbjct: 47 SSFSPLQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSS-TPVAVSGLPSG 105
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ G H+ A+T GE++ WG N GQLG G + P+ V L T AA
Sbjct: 106 VTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPV--AVSGLPSGVTAIAAG 163
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ + A T G V WG G+LG G +T TP + L +V A
Sbjct: 164 GW-HTCARTSSGGVWCWGGNYRGQLGDGT---------TTDRSTPVAVSGLP-SEVTAIA 212
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
AG H+ +G V+ +G ++ + P +S LP + GG HTC L
Sbjct: 213 AGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCAL 272
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
T G + WG+N +G LG G +P V G S V ++ G HT A++ G
Sbjct: 273 TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSG--LPSGVTAIAAGDYHTCALT-GSGGV 329
Query: 364 WGWGGSH 370
W WGG++
Sbjct: 330 WCWGGNY 336
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 132/284 (46%), Gaps = 21/284 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S + A+A GG HT LT +G V+ G N GQ
Sbjct: 485 WGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVWCWGGNFAGQ 543
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+T G ++ WG N GQLG G
Sbjct: 544 LGDGTTTDRS-TPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTN 602
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G V WG SG+L G
Sbjct: 603 RSTPV--AVSGLPSGVTAIAA-GLRYTCALTGSGGVWCWGYNLSGQLDDG---------- 649
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+TS TP + L IAA G+ ++ +G V +G ++ +G +R
Sbjct: 650 TTSRSTPVAVSGLPSGVTAIAAGGW-YTCARTSSGGVRCWGANGSGQL--GDGTTTKRST 706
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S LP + GG HTC L S G ++ WG N++G LG G
Sbjct: 707 PVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDG 750
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ +R PV S + A+A G +T LT +G V+ G N GQ
Sbjct: 587 WGGNDFGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQ 645
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P+ +SGL V I+ G ++ A T G + WG N +GQLG G
Sbjct: 646 L--DDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTK 703
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ---ESSILG 219
+ P+ V L T AA G E + A+ G V WG SG+LG G+ ++ +
Sbjct: 704 RSTPV--AVSGLPSGVTAIAA-GGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVD 760
Query: 220 FLRSTS--EYTPRLIK 233
+ S S Y P +++
Sbjct: 761 VVTSASWGVYLPMIVR 776
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
TS ++P L+GV AAG H+ +G V+ +G ++ + P
Sbjct: 46 TSSFSP-----LQGVTAI--AAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVA 98
Query: 284 ISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSES 341
+S LP + GG HTC LTS GE++ WGSN G LG GS +P V G P +
Sbjct: 99 VSGLPSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSGVT 158
Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSH 370
+ + GW A S G + W WGG++
Sbjct: 159 AI--AAGGWHTCARTSSGGV--WCWGGNY 183
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 164/344 (47%), Gaps = 20/344 (5%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
ST+ + WG+ +G LGLG +E P + ++ +ACG +T+ +T G
Sbjct: 71 STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
VY+ G ND+GQLG E L+ I GL V +++ G HH+ A+ G+L+ WG
Sbjct: 131 QVYSCGNNDYGQLG-HEKGRKRLQ--LIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGS 187
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N+ GQLGL K + +P V L Q A G +A+T GK+ SWG+ G+L
Sbjct: 188 NAEGQLGLNSKNL-IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQL 246
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + +E P+LI L GV + G HS I ++G V+ +G +
Sbjct: 247 GLGTDVK--------NEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+ + + P + L ++ CG + LT G ++T G+ G LG G+
Sbjct: 299 LGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSN 358
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
P +V S V Q+SCG +HT + S G++ WG GG+
Sbjct: 359 EILPRQVM-ELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA 401
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 139/298 (46%), Gaps = 16/298 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + R R + + K +ACG HTL + E G +++ G N GQL
Sbjct: 136 GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQL 193
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L VVQ++ G +H A+T +G+LY WG NS+GQLGLG
Sbjct: 194 GLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVK 253
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I P + L+G+ G S+A++ G V WG G+LG
Sbjct: 254 NEIK-PKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLND--------- 303
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + PR ++ L+ KV AA G S + +G V+ G ++ ++ P
Sbjct: 304 TRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPR 363
Query: 283 LISKLPYS--EEVVCGGYHTC-VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ +L S ++ CG HT ++ S G +Y WG G LG + +P+ V GP
Sbjct: 364 QVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVVHGP 421
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV----TGGGKVLSWGAGGSGRLG 210
L L K + +IPI K+ L E +AV + WG+ G LG
Sbjct: 37 LTLPFKCSNIIPIKNANR------NKKRRLACEPIIAVEYSTVTDKNMFCWGSTIHGELG 90
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
LG + + PR + + +++ A G ++ I +G+VY G+ ++
Sbjct: 91 -------LGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQL 143
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
++G +R LI L ++V CG +HT + G+L++WGSN G LG+ S +++
Sbjct: 144 GHEKGR--KRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLI 201
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+ S V QV+CG H A++ GK+ +WG
Sbjct: 202 ECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWG 239
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL +R P + + ACG ++FLT G V+ G +GQ
Sbjct: 291 WGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQ 350
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG N + P ++ L V QIS G H+ + G +Y WG GQLG
Sbjct: 351 LG-HGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLG 405
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 169/339 (49%), Gaps = 24/339 (7%)
Query: 43 WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG G G LGL + +P F +++ +ACG HTL L G VY+
Sbjct: 50 WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 109
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G NDFGQLG ++ LE +++ L E+ ++ G HS A++ G+++ WG N NGQ
Sbjct: 110 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 166
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P ++ L+ + Q A G +A+ G++ SWG SG+LG G++
Sbjct: 167 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 225
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + +E PR + L GV + + A G +HS + +G V+++G + ++ +
Sbjct: 226 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 278
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
P+++ L + V CG HT LT+ G ++T+G+ G LG G + V +
Sbjct: 279 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG-VKVNEAVP 337
Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS--EGKILTWGWGGS 369
R + + Q+SCG HT A + G++ +G G S
Sbjct: 338 RRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 376
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 15/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D+G+LG + V +A H ++A+ACG AH+L L++ G V++ G N GQL
Sbjct: 110 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 167
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G L P I L +VQI+ G H A+ +GEL+ WG N++GQLGLG+ +
Sbjct: 168 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 227
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V L G+ A G SV +T G V WG G+LG + L
Sbjct: 228 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 284
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++K L ++K G H+A + +G V+ FG ++ + P
Sbjct: 285 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 338
Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L ++ CG HT G LY +G +G LG G+++ P V G
Sbjct: 339 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 395
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 23/233 (9%)
Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
LY WG NG+LGL G + P +V ++ A G + ++ + G V
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
S GA G+LG + +R + + L +++ A G HS + + G+
Sbjct: 107 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 155
Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G +R E RP +I KL + ++ CG H L + GEL++WG N
Sbjct: 156 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 215
Query: 316 ENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+G LG+G S P RV P+ V+CG H+ ++ G + WG
Sbjct: 216 ASGQLGLGRDSTGNERLPRRVSH-LVGVPLALVACGAMHSVGLTPSGTVFVWG 267
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGL R P V +K + CG HT LT G V+ G +G
Sbjct: 265 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 324
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
QLG + ++ + + + Q+S G H+ A G LY++G +GQLG G
Sbjct: 325 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 384
Query: 161 AAKVIPI 167
+ +P+
Sbjct: 385 ESSALPV 391
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G +G LG Q G T P ++ V+ A G H+ + NG V
Sbjct: 49 SWGLGPNGELGLTQGKD--GVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y G A D + R+ ++ L E V CG H+ L+ G++++WG N N
Sbjct: 107 YSCG--ANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRN 164
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
G LG G+ + +V + + Q++CG H A++ G++ +WG S
Sbjct: 165 GQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNAS 217
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ + S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ + S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 170/352 (48%), Gaps = 25/352 (7%)
Query: 41 ALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A+WG G+LG+G + + R + + E+ L +A G H+L +T +G VY TG N
Sbjct: 4 AVWGATGAGQLGIGDADGTGKTRVTLVPSLEQE-LAFVATGYYHSLAITRSGTVYTTGKN 62
Query: 99 DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
D QLG S G + R++ L+ V + G S + G++Y WG GQLGL
Sbjct: 63 DRRQLGRS---GDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQLGL 119
Query: 158 GKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G++A + +P V+ L F A G +A+T G+V SWG G G+LG GQ
Sbjct: 120 GREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQ--- 176
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S ++P +I +L G V AAG +S + +VY FG + ++ +
Sbjct: 177 ------FVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT 230
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPER 333
RP+L+ L + V G +HT T G LY WGSN+ G LG+GS D + +P
Sbjct: 231 ARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTE 290
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED-GHSSGGQL 384
+ V +VS G +HT A+ I T G+ T + G ++ GQL
Sbjct: 291 ITHILEIGRVLEVSAGRRHTVAL----IRTVTETGAQATVAVAFGANNTGQL 338
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 147/334 (44%), Gaps = 35/334 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D +LG E +W V + E + A A G ++ + TG VY G + GQL
Sbjct: 60 GKNDRRQLGRSGDEHKWARV--TPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQL 117
Query: 104 GISENIGY--SLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+ S P + GL V+ ++ G H A+T DG ++ WG+ ++GQLG G+
Sbjct: 118 GLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQF 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + L G A G S+AVTG +V ++G+ G+LG G
Sbjct: 178 VSR--HSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGD------- 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR 279
+T+ + P L++ L+G +V AG H+ G +Y +G ++ L E +
Sbjct: 229 --TTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEADSVA 286
Query: 280 RPSLIS---KLPYSEEVVCGGYHTCVL----TSGGELYT----WGSNENGCLGIGSIDV- 327
P+ I+ ++ EV G HT L T G T +G+N G LG+
Sbjct: 287 APTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGLDPDHPA 346
Query: 328 -----LHSPERVQGPFSESPVDQVSCGWKHTAAI 356
L P R++ S P+ ++ G HT I
Sbjct: 347 SKRTQLFHPVRLKRISSMHPIKLIAGG-NHTIMI 379
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G SR P V + + ++A G ++L +T VYA G N GQ
Sbjct: 164 WGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQ 223
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + P + L K+V ++ G H+ A T G LY WG N GQLGLG +A
Sbjct: 224 LGVGDTTA-RFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEA 282
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVA----VTGGGK----VLSWGAGGSGRLGHG 212
V PT++ + I + + G +VA VT G +++GA +G+LG
Sbjct: 283 DSVA-APTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGLD 341
Query: 213 QESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
+ + T + P +K + + +K+ A G N + IFG++
Sbjct: 342 PDHPA---SKRTQLFHPVRLKRISSMHPIKLIAGG---------NHTIMIFGEQ 383
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 24/193 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V WGA G+G+LG G G ++ P L +EL V A G+ HS I +G
Sbjct: 3 VAVWGATGAGQLGIGDAD---GTGKTRVTLVPSLEQELAFV-----ATGYYHSLAITRSG 54
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
VY G D+ + + ++ L V G + V+ S G++YTWG
Sbjct: 55 TVYTTGKN--DRRQLGRSGDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGG 112
Query: 316 ENGCLGIGSIDVLHSPERVQGPFS---ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
E G LG+G + + + RV P + V V+CG +H A++ +G++ +WG G
Sbjct: 113 ERGQLGLGR-EAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGA--- 168
Query: 372 TFSEDGHSSGGQL 384
DG GQ
Sbjct: 169 ----DGQLGDGQF 177
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 69 EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117
Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 170/345 (49%), Gaps = 28/345 (8%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
L + +WG+ +YG+ G E P + S+ ++CG ++ +T +G +
Sbjct: 4 NLSKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQLG N+ L P R++ K VVQ++ H++AI +GELY WG + N
Sbjct: 64 ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKN 121
Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G+ + V+ P KV+ L G Q + G + +T K L+WG G GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG I +TP+LI+ L G+ +K + G H+A + G++Y+FG A
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG--- 321
K+ F + P L+ P + +V G H+ +T G++YTWG + G LG
Sbjct: 233 KLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG--QGGRLGHIF 289
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G SP+R+ ++ + +SCG H+ A+S+ G I TWG
Sbjct: 290 NGPEHDFLSPKRLSN-LEKAFIVDISCGNSHSVALSDVGDIYTWG 333
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 153/292 (52%), Gaps = 16/292 (5%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGE 143
L+++G V G +++GQ G S+ S P + GL+ + ++S G ++S+AIT G+
Sbjct: 5 LSKSGVV-VWGSSEYGQHG-SKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGD 62
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +WG GQLG G ++P +V LS Q A + A+ G++ +WG
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLVP---RVN-LSLKNVVQVACSDRHTAAILSNGELYTWGC 118
Query: 204 GGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+G+LGHGQ E SI + S P +K LEG KV + G H+ C+ ++ + +
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQ----PMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTW 174
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G ++ + P LI L +E+ CGG+HT +L G+LY +G G L
Sbjct: 175 GLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKL 234
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
G GS D + P ++GP + + +VS G +H+AA+++ GK+ TWG GG G
Sbjct: 235 GFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLG 286
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 31/330 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G G+LG G+LE P V + + ++ +AC HT + G +Y G + G
Sbjct: 65 LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNG 122
Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
+LG IS N+ +P+++ L+ E V+Q+S G +H+ +T D + WG G
Sbjct: 123 KLGHGQFELSISNNV--VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + I P +E L+G+ K+ + G + + GK+ +G G G+LG G
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+L PRL++ LE +++ + G HSA + + G+VY +G +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289
Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
H P +S L + ++ CG H+ L+ G++YTWG +N GI I H
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGI---H 346
Query: 330 SPERVQGPFSESP-VDQVSCGWKHTAAISE 358
+ P ++ + QV C H+ A+S+
Sbjct: 347 PNMPSKHPILQNKNIVQVVCSSSHSIALSD 376
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+ A WG G GRLG G + + P + + +K ++CGG HT L TG +Y G
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGG 228
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
FG+LG + L L+ ++ ++S G HS+A+T G++Y WG+ G+LG
Sbjct: 229 GAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ--GGRLG 286
Query: 157 -LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P ++ L F + G SVA++ G + +WG + +GHG
Sbjct: 287 HIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHG 341
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 69 EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117
Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 69 EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117
Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 135 bits (340), Expect = 4e-29, Method: Composition-based stats.
Identities = 101/352 (28%), Positives = 170/352 (48%), Gaps = 35/352 (9%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG +S+ P F + +++ G ++ LTE G VY G
Sbjct: 603 WGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGS 662
Query: 100 FGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LGI + I L P+++ L ++V +S G++HS+A+ +GEL WG GQ
Sbjct: 663 VKNPPVPVLGIPQ-IEDQLLPIKLESLT-DIVVVSIGFYHSAAVRANGELLTWGVGEEGQ 720
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G +V P ++ L+ + Q G + ++ +T GKV +WG+ G+LG G
Sbjct: 721 LGHGDTQNQV--EPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGD- 777
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T P + LE V A+G H A + + V +FG+ A
Sbjct: 778 --------TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAA----MGA 825
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ P+L+ L Y +++ CG Y T ++ G++YTWG+ + LG G+ +P+
Sbjct: 826 ASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQE--LGHGNNQTESTPK 883
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
V+ ++S + Q+SCG +HTA +++ G+I T G +F + GH +G Q
Sbjct: 884 LVEALRNQS-IRQISCGGRHTAFLTDSGRIFTSG----KDSFGQLGHQAGDQ 930
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 22/257 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G +++ P V + + + CG HT+ LT+ G VY G +++GQ
Sbjct: 713 WGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQ 772
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + Y +P+ ++ L+K V+QI++G H + +T E+ ++G G A
Sbjct: 773 LGLGDTTRYC-KPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGN------GAAMGA 825
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A +I IPT V L + + G + A++ G V +WG G LGHG
Sbjct: 826 ASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTG--QELGHGN-------- 875
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +E TP+L++ L ++ + G H+A + ++GR++ G + ++ Q G+ +P
Sbjct: 876 -NQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQ-NKP 933
Query: 282 SLISKLPYSE--EVVCG 296
I L + V CG
Sbjct: 934 KKIESLTKTTFISVSCG 950
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
L +T + PRLI++L + + G H + +G+ + +G + ++ L +
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
E P + L P ++ V GG H+ L+ G ++ WG N G LG+ + S
Sbjct: 174 EYPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 26/286 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 69 EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117
Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 165/336 (49%), Gaps = 28/336 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +YG+LG ES P ++ S + + +K + CGG H+ +T +G + G G
Sbjct: 13 WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ + + + P R+ K V+ +S HS+AI DG LY WG N +G+LG+G
Sbjct: 73 QLGLGD-LKDIVIP-RVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLN 130
Query: 162 AKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P VE L + + G + +T K +WG G GRLGHG + +
Sbjct: 131 VNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDV 190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
YTP+LI+ L G+ VK G H+A + NG+VY G A K+ F
Sbjct: 191 ---------YTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKED 241
Query: 278 ARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI----GSIDVLHS 330
P L+ + +EV G H+ V+T+ G++YTWG + G LG D+L S
Sbjct: 242 IYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG--QGGRLGHIYNGPEPDIL-S 298
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
P+ V+ S V+ +SCG HT IS G + WG
Sbjct: 299 PKLVEKLNSIIAVN-ISCGHSHTVVISNIGDVYAWG 333
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 150/286 (52%), Gaps = 15/286 (5%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWG 148
V A G +++GQLG I E ++EP I L + ++ G HHS+ IT GEL +WG
Sbjct: 10 VVAWGSSEYGQLGAIYEE--SNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
GQLGLG K I IP + + + + S A+ G++ +WG SG+
Sbjct: 68 YGGCGQLGLGD--LKDIVIPRVMTSIKNVI--NVSCSDRHSAAILEDGRLYTWGCNKSGK 123
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G S+ L + TP+L+++L KV + G H+AC+ + + Y +G
Sbjct: 124 LGIG---SLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQG 180
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + N P LI L + +VCGG+HT +L + G++Y G G LG GS +
Sbjct: 181 RLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKE 240
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
++ P+ +QG + + +VS G++H+A I ++GK+ TWG GG G
Sbjct: 241 DIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLG 286
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG G GRLG G + P + + S+K + CGG HT L G VY G
Sbjct: 171 AYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGA 230
Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG- 156
FG+LG E+I Y + L+ S K + ++S GY HS+ IT G++Y WG+ G+LG
Sbjct: 231 FGKLGFGSKEDI-YIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQ--GGRLGH 287
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ I P VE L+ I + G +V ++ G V +WG + LGHG
Sbjct: 288 IYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGV--TRNLGHG 341
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS+G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSYGQLGHD 277
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKL 287
P++ + VK A G HS + E+G VY G ++ + EGN +P I L
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN---KPEQIGAL 81
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
V CG H+ L+ G+L++WG+ +G LG+ + + + R+ ++ + Q
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 346 VSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
VSCG W A S+G+ TWG +S GQL G+ PS+
Sbjct: 142 VSCGNWHCLALASDGQFFTWG------------KNSHGQLGLGKEFPSQ 178
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 28 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 84
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 85 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 143
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 144 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 195
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 196 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 254
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 255 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 313
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 314 VPSSGLIYAFGCGA 327
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 13 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 71
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 72 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 121
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 122 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 177
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 178 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 236
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 237 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 281
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 218 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 277
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 278 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 336
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 337 CNVKCPSPVK 346
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 170/345 (49%), Gaps = 28/345 (8%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
L + +WG+ +YG+ G E P + S+ ++CG ++ +T +G +
Sbjct: 4 NLSKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQLG N+ L P R++ K V+Q++ H++AI +GELY WG + N
Sbjct: 64 ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKN 121
Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G+ + V+ P KV+ L G Q + G + +T K L+WG G GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG I +TP+LI+ L G+ +K + G H+A + G++Y+FG A
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG--- 321
K+ F + P L+ P + +V G H+ +T G++YTWG + G LG
Sbjct: 233 KLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG--QGGRLGHIF 289
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G SP+R+ ++ + +SCG H+ A+S+ G I TWG
Sbjct: 290 NGPEHDFLSPKRLSN-LEKAFIVDISCGNSHSVALSDVGDIYTWG 333
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 153/293 (52%), Gaps = 18/293 (6%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGE 143
L+++G V G ++GQ G S+ S P + GL+ + ++S G ++S+AIT G+
Sbjct: 5 LSKSGVV-VWGSTEYGQHG-SKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGD 62
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +WG GQLG G ++P +V LS Q A + A+ G++ +WG
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLVP---RVN-LSLKNVIQVACSDRHTAAILSNGELYTWGC 118
Query: 204 GGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+G+LGHGQ E SI + S P +K LEG KV + G H+ C+ ++ + +
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQ----PMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTW 174
Query: 263 GDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
G ++ + P LI L P +E+ CGG+HT +L G+LY +G G
Sbjct: 175 GLGLQGRLGHGDTQDIFTPKLIESLAGLPI-KEISCGGHHTAILLVTGKLYMFGGGAFGK 233
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
LG GS D + P ++GP + + +VS G +H+AA+++ GK+ TWG GG G
Sbjct: 234 LGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLG 286
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 31/330 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G G+LG G+LE P V + + ++ +AC HT + G +Y G + G
Sbjct: 65 LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDRHTAAILSNGELYTWGCSKNG 122
Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
+LG IS N+ +P+++ L+ E V+Q+S G +H+ +T D + WG G
Sbjct: 123 KLGHGQFELSISNNV--VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + I P +E L+G+ K+ + G + + GK+ +G G G+LG G
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+L PRL++ LE +++ + G HSA + + G+VY +G +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289
Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
H P +S L + ++ CG H+ L+ G++YTWG +N GI I H
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGI---H 346
Query: 330 SPERVQGPFSESP-VDQVSCGWKHTAAISE 358
+ P ++ + QV C H+ A+S+
Sbjct: 347 PNMPSKHPILQNKNIVQVVCSSSHSIALSD 376
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+ A WG G GRLG G + + P + + +K ++CGG HT L TG +Y G
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGG 228
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
FG+LG + L L+ ++ ++S G HS+A+T G++Y WG+ G+LG
Sbjct: 229 GAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ--GGRLG 286
Query: 157 -LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P ++ L F + G SVA++ G + +WG + +GHG
Sbjct: 287 HIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHG 341
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC ++K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS ++ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTSLQGIVAEP-QVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG++ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + +NG V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
HT S G +Y +G G LG G + P V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + GE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFG-AGSCGQLGHD 277
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT+ G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 167/349 (47%), Gaps = 42/349 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
+G D G+LG G+ + RP V S F K + A++CG HT+ LT +
Sbjct: 15 FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYM 146
G VY+ G GQLG + ++ P +I+ ++E V +S G HS+A+T DG LYM
Sbjct: 72 GAVYSWGWGSMGQLGHGDLKSINV-PQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130
Query: 147 WGKNSNGQLGLGKK-AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKVLSWG 202
WG+ GQLGL K+ A P K L G+ + + + G + A+T G+V WG
Sbjct: 131 WGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWG 190
Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G SG+LG G ++ +LG R P L++ G KV A G HSA + E
Sbjct: 191 RGDSGQLGIGSAWLKDTDDNGLLGVSR------PHLVEGFNGEKVVQVACGAFHSAAVTE 244
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP---SLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
G VYI+G + + + + P +P + V CGG+HT V+ G+ Y +
Sbjct: 245 QGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIP-ALRVSCGGWHTMVVAKSGDCYAF 303
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
G E G LG+G P V+ ++ V Q +CG HT ++ I
Sbjct: 304 GRGEYGRLGLGDTKSRTRPHLVKALKGQT-VIQAACGGSHTLFVTSDGI 351
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 31/335 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLNDF 100
WG G G+LG G L+S P + FE+ LK ++CGG H+ +T G +Y G +
Sbjct: 77 WGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHW 136
Query: 101 GQLGISENIGYSLE------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG+ + + E PL + VV++S G H++A+T G +Y+WG+ +GQ
Sbjct: 137 GQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQ 196
Query: 155 LGLGKKAAKV--------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
LG+G K + P VE +G Q A G S AVT G V WG
Sbjct: 197 LGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDY 256
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LG GQ S + TP+ ++ + + + G H+ + ++G Y FG
Sbjct: 257 GMLGVGQTSD---------QQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGE 307
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + RP L+ L + CGG HT +TS G Y G ++G LG+
Sbjct: 308 YGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTD 367
Query: 325 IDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISE 358
+ L P R+ GP PV QVS G H+ A++
Sbjct: 368 MKPLSVPTRLDLGPI---PVRQVSAGGAHSMALTH 399
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 92 VYATGLNDFGQLGIS---------ENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVD 141
V A G ND GQLG +++ S P ++ GL +E+V +S G H+ A+T
Sbjct: 12 VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKVL 199
G +Y WG S GQLG G K I +P K+ G+ + G S AVT G +
Sbjct: 72 GAVYSWGWGSMGQLGHGD--LKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLY 129
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAAGFLHSACIDE 255
WG G+LG +E + E P LEGV VK++ G H+A +
Sbjct: 130 MWGETHWGQLGLPKE------FEAAHESFPVKCPLLEGVADESVVKVSCGG-THTAALTN 182
Query: 256 NGRVYIFG-----DRAVDKMLFQEGNH-----ARRPSLISKLPYSE--EVVCGGYHTCVL 303
GRVY++G + ++ + RP L+ + +V CG +H+ +
Sbjct: 183 LGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAV 242
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
T G +Y WG + G LG+G +P+RV+ F + P +VSCG HT +++
Sbjct: 243 TEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEF-FDDIPALRVSCGGWHTMVVAK 296
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 129/281 (45%), Gaps = 30/281 (10%)
Query: 42 LWGNGDYGRLGLG-SLESRWR--PVVCSAFE---KHSLKALACGGAHTLFLTETGCVYAT 95
+WG +G+LGL E+ PV C E S+ ++CGG HT LT G VY
Sbjct: 130 MWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVW 189
Query: 96 GLNDFGQLGI--------SEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
G D GQLGI +N +G S P + G E VVQ++ G HS+A+T G +
Sbjct: 190 GRGDSGQLGIGSAWLKDTDDNGLLGVS-RPHLVEGFNGEKVVQVACGAFHSAAVTEQGHV 248
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y+WGK G LG+G+ + + P +VE I + + G ++ V G ++G G
Sbjct: 249 YIWGKEDYGMLGVGQTSDQ--QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRG 306
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
GRLG G + S P L+K L+G V AA G H+ + +G Y+ G
Sbjct: 307 EYGRLGLGD---------TKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGR 357
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
++ + P+ + P +V GG H+ LT
Sbjct: 358 PDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSMALT 398
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 167/333 (50%), Gaps = 22/333 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + KL S++VV CG HT VLT G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
S V Q++CG HT A S G I +G G
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 139/288 (48%), Gaps = 22/288 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + FGQ GI NI + ++ G + V +++ G +HS + DGE+Y G N+ G
Sbjct: 5 GYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + +K P ++ L+G A G S+A++ G++ SWGAG G+LG
Sbjct: 65 QLGHDCEGSK----PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTT 120
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
+ PRLIK+L + + G H + +G+ + +G + ++ L
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+E P + L P ++ V GG H+ L+ G ++ WG N +G LG+
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
SP V+ S+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+ G G ++ E P++ + VK A G HS + E+G
Sbjct: 1 MLCWGYSSFGQPGIGSNIQVI-----VPE--PQVYGFIHDRNVKEVACGGNHSVFLLEDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY G ++ +P I L + V CG H+ L+ G+L++WG+
Sbjct: 54 EVYTCGLNTKGQL--GHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAG 111
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFS 374
+G LG+ +I+ + R+ ++ + QVSCG W A ++G+ TW
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTW---------- 161
Query: 375 EDGHSSGGQLDRGQLTPSE 393
G +S GQL G+ PS+
Sbjct: 162 --GQNSYGQLGLGKECPSQ 178
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 154/327 (47%), Gaps = 23/327 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G +HT LT +G V+ G N FGQ
Sbjct: 295 WGANWSGQLGDGTTTARSTPVAVSGLAS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQ 353
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G + WG+N +GQLG G
Sbjct: 354 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTT 412
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ + A+ G + + A T G V+ WG SG+LG G
Sbjct: 413 RSTPVA-----VSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT------- 460
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + L G V AAG H+ + +G V+ +G + ++
Sbjct: 461 --TTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT 517
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P +S LP + GG HTC LTS G + WG+N +G LG G+ +P V G
Sbjct: 518 PVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGL-- 575
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWG 365
S V ++ G HT A+ S G + WG
Sbjct: 576 PSGVMAIAAGDLHTCALTSSGGVWCWG 602
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 160/351 (45%), Gaps = 35/351 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S + A+A GG+HT L +G V+ G N GQ
Sbjct: 448 WGDNWSGQLGDGTTTDRSTPVAVSGLGS-GVTAIAAGGSHTCALMSSGGVWCWGRNSSGQ 506
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+ +SGL EV I++G H+ A+T G + WG N +GQLG G A
Sbjct: 507 LGDGTTTDRG-TPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTA 565
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ + A+ G + A+T G V WGA SG+LG G
Sbjct: 566 RSTPVA-----VSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGT------- 613
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T+ TP + L IAA F H+ + +G V+ +G ++ +
Sbjct: 614 --TTARSTPVAVSGLPSGVTAIAAGSF-HTCALTSSGGVWCWGANWSGQLGDGSYTDSST 670
Query: 281 PSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P +S LP + G +HTC T G ++ W SN G LG GS +P V G S
Sbjct: 671 PVAVSGLPSGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVS 730
Query: 340 ESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQL 389
V ++ G HT A S G ++ W G +S GQL G+L
Sbjct: 731 G--VTAIAAGVVHTCARTSSGGVMCW------------GANSSGQLGDGRL 767
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 140/296 (47%), Gaps = 18/296 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A+A GGAHT LT +G V G N FGQLG S P+ +SGL V I+ GY
Sbjct: 69 VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRS-TPVAVSGLTSGVTAIAAGY 127
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+ G + WG N +GQLG G + P+ V L+ T AA G + + A
Sbjct: 128 AHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPV--AVSGLASGVTAIAA-GDDHTCAR 184
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G V+ WG SG+LG G +T TP + L G V AAG H+
Sbjct: 185 TSSGGVMCWGDNWSGQLGDGT---------TTDRSTPVAVSGL-GSGVTAIAAGGSHTCA 234
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYT 311
+ +G V+ +GD ++ P +S L + GG+HTC TS G +
Sbjct: 235 LMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMC 294
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
WG+N +G LG G+ +P V G S V ++ G HT A+ S G + WG+
Sbjct: 295 WGANWSGQLGDGTTTARSTPVAVSGL--ASGVTAIAAGDSHTCALTSSGGVWCWGY 348
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 154/326 (47%), Gaps = 23/326 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G HT T +G V G N GQ
Sbjct: 397 WGRNKDGQLGDGTTTTRSTPVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQ 455
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G ++ WG+NS+GQLG G
Sbjct: 456 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ ++ A+ G + A+T G V+ WGA SG+LG G
Sbjct: 515 RGTPVA-----VSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGT------- 562
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T+ TP + L + I AAG LH+ + +G V+ +G + ++
Sbjct: 563 --TTARSTPVAVSGLPSGVMAI-AAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARST 619
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P +S LP + G +HTC LTS G ++ WG+N +G LG GS +P V G
Sbjct: 620 PVAVSGLPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL-- 677
Query: 340 ESPVDQVSCGWKHTAA-ISEGKILTW 364
S V ++ G HT A G + W
Sbjct: 678 PSGVTAIAAGRFHTCARTGSGGVWCW 703
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 140/325 (43%), Gaps = 19/325 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV S + A+A G AHT L +G V G N GQ
Sbjct: 91 WGRNGFGQLGDGTTTDRSTPVAVSGLTS-GVTAIAAGYAHTCALMSSGGVMCWGDNWSGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G + WG N +GQLG G
Sbjct: 150 LGDGTTTDRS-TPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 208
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+ G V WG SG+LG G
Sbjct: 209 RSTPV--AVSGLGSGVTAIAA-GGSHTCALMSSGGVWCWGDNWSGQLGDGT--------- 256
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L IAA GF H+ +G V +G ++ P
Sbjct: 257 TTDRSTPVAVSGLASGVTAIAAGGF-HTCARTSSGGVMCWGANWSGQLGDGTTTARSTPV 315
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+S L + G HTC LTS G ++ WG N G LG G+ +P V G S
Sbjct: 316 AVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGL--GS 373
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWG 365
V ++ G HT A+ S G + WG
Sbjct: 374 GVTAIAAGDFHTCALMSSGGVRCWG 398
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 111/256 (43%), Gaps = 23/256 (8%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
S PL + V I+ G H+ A+T G + WG+N GQLG G + P+ V
Sbjct: 62 SFSPL------QGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPV--AV 113
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ T AA G+ + A+ G V+ WG SG+LG G +T TP
Sbjct: 114 SGLTSGVTAIAA-GYAHTCALMSSGGVMCWGDNWSGQLGDGT---------TTDRSTPVA 163
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS- 290
+ L V AAG H+ +G V +GD ++ P +S L
Sbjct: 164 VSGLA-SGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV 222
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+ GG HTC L S G ++ WG N +G LG G+ +P V G S V ++ G
Sbjct: 223 TAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGL--ASGVTAIAAGG 280
Query: 351 KHTAA-ISEGKILTWG 365
HT A S G ++ WG
Sbjct: 281 FHTCARTSSGGVMCWG 296
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
S S L + GG HTC LTS G + WG N G LG G+ +P V G S
Sbjct: 61 SSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGL--TS 118
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWG 365
V ++ G+ HT A+ S G ++ WG
Sbjct: 119 GVTAIAAGYAHTCALMSSGGVMCWG 143
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 159/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFG-AGSCGQLGHD 277
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT+ G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 161/335 (48%), Gaps = 22/335 (6%)
Query: 44 GNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G+G GRLGL +R P+ + +K+LACGG H L L+ G VY+ G ND
Sbjct: 10 GHGAGGRLGLNDERARTAFTGPL--GTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYNDS 67
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q G EP I L+ +VVQI+ G HS A+T E++ WG+ +GQLG G
Sbjct: 68 RQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P V+ L G K G+E + A+TG GKVL +G+ SG+LG+G +G
Sbjct: 128 VSD--VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIG 185
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNH 277
+ Y P +K L + A G S + G++Y G A ++ F+E
Sbjct: 186 ----GNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVES 241
Query: 278 ARRP------SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
P + K + + V CG H+ L+ G +Y+WGS N LG G + +P
Sbjct: 242 LNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTP 301
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ V P VS G H+AA+S G+I TWG
Sbjct: 302 KMV-AMLEADPCVSVSAGGYHSAAVSATGRIYTWG 335
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 18/255 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G + W P + + +K++ CG +T +T TG V G G+
Sbjct: 115 WGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGK 174
Query: 103 LG---ISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG + IG ++ P+++ L K ++Q + G + S ++ G+LY G +NGQLG+
Sbjct: 175 LGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGI 234
Query: 158 GKKAAKVIPIP----TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + + +P + G+F K + G S+A++ G V SWG+G + LGHG
Sbjct: 235 PFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGG 294
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ +TP+++ LE +AG HSA + GR+Y +G V ++
Sbjct: 295 ---------TEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTG 345
Query: 274 EGNHARRPSLISKLP 288
+ + +LP
Sbjct: 346 QNIDDHSADHVQRLP 360
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 149/301 (49%), Gaps = 21/301 (6%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+++ G N++G+L + N LE + K + I+ G + + DG ++ G N
Sbjct: 471 LFSCGQNNYGELCLGHCNSTSKLEHVPFFS-AKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
+GQ G G +VI I T V LSGI AA G E +AV G V SWG G+
Sbjct: 530 KSGQCGNGTFEERVI-IATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQ 588
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG G S+I + +TPR+I L E + AA + HSA + NG + +FG
Sbjct: 589 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640
Query: 268 DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++ H P L+ L EV CG YHT +TSGGE+Y++G N+ G LG+G
Sbjct: 641 GQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHA 700
Query: 326 DVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE-GKILTWGWG--GSHGTFSEDGHSS 380
+ P V+ ES + VSCG+ HT ISE GK++TWG G G S+D +S
Sbjct: 701 RNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNS 760
Query: 381 G 381
Sbjct: 761 A 761
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 156/334 (46%), Gaps = 25/334 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG S + F +++ +A G + + G V+ GLN GQ
Sbjct: 475 GQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCGLNKSGQC 534
Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G E + + +SG+ +V + G H A+ DG +Y WG N GQLGLG
Sbjct: 535 GNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGST 594
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P ++ L + AA+ + S V+ G++L +G G+LG H Q
Sbjct: 595 ISKSH-TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQH--- 650
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+L+ L + A G H+ I G VY FG ++ +
Sbjct: 651 --------QHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARN 702
Query: 278 ARRPSLI-SKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ P+L+ + L S+E V CG YHT ++ G+L TWG N+ G LGIGS D +S +
Sbjct: 703 MKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQ 762
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V P S S + SCG HT + S G+++ +G
Sbjct: 763 YVPLPLS-SKIKTASCGCYHTLILMSNGRVMVFG 795
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G G+ E R PV + ++ A A G H L + G VY+ G ND GQLG+
Sbjct: 532 GQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGL 591
Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
I S P I L+++ + + YHHS+ ++ +GEL M+G N GQLGL +
Sbjct: 592 GSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQ 651
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V+ LS + A G ++A+T GG+V S+G G+LG G ++
Sbjct: 652 HTP--QLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNM------ 703
Query: 224 TSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P L+K G K+ + G+ H+ I E G++ +G ++ +H
Sbjct: 704 ---KVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNS 760
Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ LP S ++ CG YHT +L S G + +G N G LG GS
Sbjct: 761 AQYV-PLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGS 806
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLGS S+ ++ S EK+ + A H+ ++ G + G+ND
Sbjct: 581 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L +V+ +++ G +H+ AIT GE+Y +GKN GQLGLG
Sbjct: 641 GQLGL-DHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGH 699
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A+ + +PT V+ G ++ + G+ +V ++ GK+++WG G+LG G +
Sbjct: 700 --ARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDH 757
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+++++Y P + K+K A+ G H+ + NGRV +FG
Sbjct: 758 -----KNSAQYVPLPLSS----KIKTASCGCYHTLILMSNGRVMVFG 795
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G D G+LGL + + P + + + +ACG HT+ +T G VY+ G ND+G
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYG 693
Query: 102 QLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ + L + L +++V +S GY+H+ I+ G+L WG+N GQLG+G
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753
Query: 159 ----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K +A+ +P+P + K A+ G ++ + G+V+ +G G+LG G
Sbjct: 754 SKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSR 807
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ L S P L +V AAGF S
Sbjct: 808 T-----LPSADLPLPVPSNSLANDEVVRIAAGFYSS 838
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 166/341 (48%), Gaps = 26/341 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ PV+ ++ ALA G +HT+ + + G V+A GLN G
Sbjct: 481 WGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASG 540
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG I + P++I GL V I+ G H+ A DG ++ WG NS GQLG G
Sbjct: 541 QLGDGATIDRRI-PVQIPGLAG-VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTT 598
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ +V L+G+ A G SVA+ G V +WG G+LG G ++ L
Sbjct: 599 HRLSPV--QVPGLTGV--SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARL--- 651
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
TP + L GV AAG LH+ + ++G V+ +G + ++ +G RR
Sbjct: 652 ------TPVQVHGLTGVTA--VAAGSLHTVALRQDGTVWAWGYNDLGQL--GDGTTTRRL 701
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P + L + G +HT + G ++ WG N G LG GS +P +VQ
Sbjct: 702 APVQVQGLTDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQ---E 758
Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
+ V ++ G+ HT A+ + + W WG + GT +G S+
Sbjct: 759 LTGVSALAAGYAHTVAVKQDGTV-WAWGNNSGTQLGNGSST 798
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 157/328 (47%), Gaps = 28/328 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R PV S+ A+A G HTL + + G V A G N +GQ
Sbjct: 431 WGDNVWGQLGDGTYTDRLTPVQVPDLT--SVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQ 488
Query: 103 LGISENIGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S P+ + GL V ++ G H+ A+ DG ++ WG N++GQLG G
Sbjct: 489 LGDGTS-SRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGAT 547
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ ++ L+G+ A G ++A G V SWGA G+LG G
Sbjct: 548 IDRRIPV--QIPGLAGV--TAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGT------- 596
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T +P + L GV AAG HS + ++G V +G + ++ +G A R
Sbjct: 597 --TTHRLSPVQVPGLTGVSAM--AAGDAHSVALLQDGTVSAWGRNSWGQL--GDGTTAAR 650
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L V G HT L G ++ WG N+ G LG G+ +P +VQG
Sbjct: 651 LTPVQVHGLTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQG-- 708
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ V ++ G+ HT A+ +G + WG
Sbjct: 709 -LTDVTAIAAGYFHTVAVRQDGTVWAWG 735
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 159/333 (47%), Gaps = 27/333 (8%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WGN +G+LG G+ R PV + A+A G HT + + G V+A
Sbjct: 24 QDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLT--GVTAVAAGRHHTFAVRQDGTVWAW 81
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLN +GQLG + P+++ GL V I+ G H+ A++ DG ++ WG N GQL
Sbjct: 82 GLNVWGQLGDGTHT-ERHTPVQVPGLTG-VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQL 139
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G +A + P+ ++ L+G+ A G + AV G V +WG G+LG G
Sbjct: 140 GDGTRADRHTPV--QLPELTGV--TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTR- 194
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
T+ TP + L GV AAG H+ + ++G V+ +G+ A+ ++ +G
Sbjct: 195 --------TNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTVWAWGNNALGQL--GDG 242
Query: 276 NHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ R P + L + G HT + G ++ WG N G LG G+ +P +
Sbjct: 243 TYTERLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQ 302
Query: 334 VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V G S V ++ G +HT A+ +G + WG
Sbjct: 303 VPG---LSGVTAIAEGRRHTFAVRQDGTVWAWG 332
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 153/325 (47%), Gaps = 23/325 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + A+A G AHTL + G V++ G N +GQ
Sbjct: 534 WGLNASGQLGDGATIDRRIPVQIPGLA--GVTAIAAGSAHTLAAGQDGAVWSWGANSYGQ 591
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL V ++ G HS A+ DG + WG+NS GQLG G AA
Sbjct: 592 LGDGTTT-HRLSPVQVPGLTG-VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAA 649
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 650 RLTPV--QVHGLTGV--TAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGT--------- 696
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P ++ L V AAG+ H+ + ++G V+ +G ++ P
Sbjct: 697 TTRRLAPVQVQGL--TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPV 754
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ +L + G HT + G ++ WG+N LG GS ++P V+G +
Sbjct: 755 QVQELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEG---LTG 811
Query: 343 VDQVSCGWKHTAAISEGKILTWGWG 367
V ++ G HTAA+S + W WG
Sbjct: 812 VSALTAGRFHTAAVSP-EGFGWAWG 835
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 151/326 (46%), Gaps = 24/326 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ R PV + A++ G +HT+ + + G V+A G N +GQ
Sbjct: 231 WGNNALGQLGDGTYTERLTPVQVPGLT--GVTAISAGESHTVAVRQDGTVWAWGDNVWGQ 288
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL V I+ G H+ A+ DG ++ WG N GQLG G ++
Sbjct: 289 LGDGTRTD-RLTPVQVPGLSG-VTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSD 346
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + A G ++AV G V +WG G+LG G
Sbjct: 347 RLTPV--QVPDLTSV--TAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTY-------- 394
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T TP + L GV AAG H+ + ++G V+ +GD ++ +G + R
Sbjct: 395 -TDRLTPVQVPGLTGVTA--IAAGESHTVAMRQDGTVWAWGDNVWGQL--GDGTYTDRLT 449
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + L + G YHT + G + WG N G LG G+ SP V G
Sbjct: 450 PVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGV 509
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
+ ++ G HT A+ +G + WG
Sbjct: 510 TVFAALAAGDSHTVAVMQDGTVWAWG 535
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 19/282 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R PV + A+A G AH++ L + G V A G N +GQ
Sbjct: 584 WGANSYGQLGDGTTTHRLSPVQVPGLT--GVSAMAAGDAHSVALLQDGTVSAWGRNSWGQ 641
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL V ++ G H+ A+ DG ++ WG N GQLG G
Sbjct: 642 LG-DGTTAARLTPVQVHGLTG-VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTR 699
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+ + A G+ +VAV G V +WG G+LG G
Sbjct: 700 RLAPV--QVQGLTDV--TAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGS--------- 746
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST+ TP ++EL GV AAG+ H+ + ++G V+ +G+ + ++ P
Sbjct: 747 STARSTPVQVQELTGVSAL--AAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPV 804
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ L + G +HT ++ G + WG N G +G G+
Sbjct: 805 WVEGLTGVSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGT 846
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 140/296 (47%), Gaps = 25/296 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A G HT+ + + G +A G N +GQLG L P+++ GL V ++ G
Sbjct: 9 VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTD-RLTPVQVPGLTG-VTAVAAGR 66
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HH+ A+ DG ++ WG N GQLG G + P+ +V L+G+ A G + AV
Sbjct: 67 HHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPV--QVPGLTGV--TAIAAGRRHTFAV 122
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
+ G V +WG G+LG G + +TP + EL GV AAG H+
Sbjct: 123 SQDGTVWAWGDNDWGQLGDGTRA---------DRHTPVQLPELTGVTA--IAAGRRHTFA 171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+ ++G V+ +GD A ++ +G R P + L + G YHT + G ++
Sbjct: 172 VRQDGTVWAWGDNAWGQL--GDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVW 229
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
WG+N G LG G+ +P +V G + V +S G HT A+ +G + WG
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPG---LTGVTAISAGESHTVAVRQDGTVWAWG 282
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 21/253 (8%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
LQ + WG +G+LG G+ +R PV + A+A G HT+ L + G V+A
Sbjct: 626 LQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT--GVTAVAAGSLHTVALRQDGTVWA 683
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G ND GQLG L P+++ GL +V I+ GY H+ A+ DG ++ WG N GQ
Sbjct: 684 WGYNDLGQLGDGTTT-RRLAPVQVQGLT-DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A+ P+ +V+ L+G+ A G+ +VAV G V +WG +LG+G
Sbjct: 742 LGDGSSTARSTPV--QVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGS- 796
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
ST YTP ++ L GV AG H+A + G + +G ++ +
Sbjct: 797 --------STDRYTPVWVEGLTGVSALT--AGRFHTAAVSPEGFGWAWGRNNFGQV--GD 844
Query: 275 GNHARRPSLISKL 287
G A RP + +
Sbjct: 845 GTTADRPRPVDVV 857
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 30/268 (11%)
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+++ GL V + G +H+ A+ DG + WG N+ GQLG G + ++ P+ +V L+
Sbjct: 1 MQVPGLTG-VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPV--QVPGLT 57
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G+ A G + AV G V +WG G+LG G T +TP + L
Sbjct: 58 GV--TAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTH---------TERHTPVQVPGL 106
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEV 293
GV AAG H+ + ++G V+ +GD D +G A R P + +L +
Sbjct: 107 TGVTA--IAAGRRHTFAVSQDGTVWAWGDN--DWGQLGDGTRADRHTPVQLPELTGVTAI 162
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
G HT + G ++ WG N G LG G+ +P +V G + V ++ G HT
Sbjct: 163 AAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPG---LTGVTAIAAGDYHT 219
Query: 354 AAISEGKILTWGWGGS------HGTFSE 375
A+ + + W WG + GT++E
Sbjct: 220 LAVRQDGTV-WAWGNNALGQLGDGTYTE 246
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG GS +R PV E + ALA G AHT+ + + G V+A G N Q
Sbjct: 734 WGYNLWGQLGDGSSTARSTPVQVQ--ELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQ 791
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ + GL V ++ G H++A++ +G + WG+N+ GQ+G G A
Sbjct: 792 LGNGSSTD-RYTPVWVEGLTG-VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTAD 849
Query: 163 KVIPIPTKVE 172
+ P+ ++
Sbjct: 850 RPRPVDVVIQ 859
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN---KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G++ S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 141/287 (49%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HGREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+ + S
Sbjct: 174 DFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G +++ G + G
Sbjct: 3317 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDG 3376
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3377 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3435
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3436 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3488
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3489 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3544
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G GS V P V
Sbjct: 3545 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVH- 3603
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 3604 ELDDARVNRVSCGSSHSIA 3622
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4410 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4469
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4470 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4521
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4522 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4578
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H T GE++TWG N+ G LG G+ L P V
Sbjct: 4579 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4637
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4638 LQGKKITRVACGSAHTLAWSTMK 4660
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 40/317 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3370 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3429
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L S + + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3430 LGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3489
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3490 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3544
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3545 ------RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGSTI 3594
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
++PSL+ +L + V CG H+ + T ++ E V
Sbjct: 3595 VNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAT-----------------NNQEPV 3637
Query: 335 QGPFSESPVDQVSCGWK 351
P + P+ Q+S +K
Sbjct: 3638 MFPTEKDPLGQISLTFK 3654
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 153/332 (46%), Gaps = 23/332 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG PV+C + L G L +T G VYATG G+
Sbjct: 4297 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4356
Query: 103 LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG G
Sbjct: 4357 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4415 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4467
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+ +
Sbjct: 4468 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4523
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ P I L +V CG + LT G +YTWG + LG G+ D + P +V
Sbjct: 4524 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4583
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ ++ G H A ++ G++ TWG
Sbjct: 4584 AA-LQGKKIISIATGSLHCVACTDKGEVFTWG 4614
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 166/347 (47%), Gaps = 28/347 (8%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCV 92
Q +WG D +LG G S+ + PV K LK + GG+ TLF+ ++ G +
Sbjct: 3257 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKL 3313
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGK 149
YA G G+LG+ ++ EP I L + +++ + +G H+ A+T DG+++ WG+
Sbjct: 3314 YACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGE 3372
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+G+LG G + + P +E L + A G S A+T G++ +WG G GRL
Sbjct: 3373 GEDGKLGHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3430
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAV 267
GHG + ++ P+L++ L G +V A G + + +G VY +GD
Sbjct: 3431 GHGD---------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDF 3481
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
K+ + P LI +L ++ CG + LT GE++TWG + LG G+
Sbjct: 3482 GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3541
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ P V+G V V+ G H A+++ G++ WG HG
Sbjct: 3542 HHVRKPTLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWG-DNDHG 3586
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4403 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4462
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4463 LGHGDSED-QLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4520
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4521 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4577
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4578 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4630
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4631 RPRLVHALQGKKITRVACGSAHT 4653
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4350
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4351 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4408
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4409 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
++ + P L+ L + +V CG T +T +++WG + G LG
Sbjct: 4460 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4519
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4520 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH 4567
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LT+ VY+ G D G+LG + + Y L + + K + I+ G +S+ ++
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 573
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
+GELY WG+ + G+LG G + + IPT V L+G A G Q++ VT G
Sbjct: 574 SNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGI 631
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G TP+++ +L + V G SA + G
Sbjct: 632 VFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 682
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ H R P +I L +E+ G +H LT +Y WG N
Sbjct: 683 EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRN 742
Query: 316 ENG 318
+ G
Sbjct: 743 DYG 745
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 31/313 (9%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C A + +K L C + L+ +G VY Q P R+ G
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 500
Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
++ V + + H A+T D +Y WG G+LG G + P VE L
Sbjct: 501 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 558
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S ++ G++ +WG G GRLGHG ++L P L+ L G
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 609
Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
V A +G + C+ +G V+ +GD K+ + ++ P ++ KL +V
Sbjct: 610 MVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 669
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CGG + LT+ GE+YTWG E LG G+ + + P+ ++ V ++ G H
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV-LXTKKVKELCVGNFHVL 728
Query: 355 AISEGKILTWGWG 367
A++E + L +GWG
Sbjct: 729 ALTEDQ-LVYGWG 740
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 124 EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
E+VQ H S +Y+WG N QLG G K +K I +P E LS +
Sbjct: 3240 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3297
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + V+ GK+ + G G +GRLG G +S++ P+LI L +K
Sbjct: 3298 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3348
Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
A +G H+ + ++G+++ +G+ K+ +P LI L ++ CG
Sbjct: 3349 MAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3408
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AA 355
H+ +TS GELYTWG E G LG G P+ VQ + V QV+CG + A
Sbjct: 3409 HSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQR-VIQVACGSRDAQTMAL 3467
Query: 356 ISEGKILTWGWG--GSHGTFSEDGHSSGGQLDR 386
++G + +WG G G G DG + +DR
Sbjct: 3468 TADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDR 3500
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 27/254 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + A ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 529 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 588
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGL 157
L G S+N+ L P ++ L VV ++ G S +T G ++ WG + G+LG
Sbjct: 589 LGHGNSDNV---LIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 645
Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G K K+ V+ L I + G + S A+T G+V +WG G RLGHG
Sbjct: 646 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 699
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
E I P++I+ L KVK G H + E+ VY +G ++
Sbjct: 700 EEHI---------RYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA 750
Query: 274 EGNHARRPSLISKL 287
G P+L L
Sbjct: 751 LGTVVPEPTLCPTL 764
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 103/251 (41%), Gaps = 69/251 (27%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +P E LS + Q G + +AVT GKV +
Sbjct: 4292 GAIYGWGHNHRGQLG-GLEGAKV-KLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYAT 4349
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G +GRLG G S++ P L++ ++ V VK A
Sbjct: 4350 GYGAAGRLGIGGTDSVM---------VPTLLESIQHVFVKKVA----------------- 4383
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V GG H L+S G +Y+WG ++G LG
Sbjct: 4384 -------------------------------VNSGGKHCLALSSEGHVYSWGEGDDGKLG 4412
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSS 380
G+ + P+ ++ VD ++CG H+AAI S G + TWG G + GH
Sbjct: 4413 HGNRLMYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWG----KGRYGRLGHGD 4467
Query: 381 GGQLDRGQLTP 391
QLTP
Sbjct: 4468 S----EDQLTP 4474
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 694
Query: 103 LG--ISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E+I Y P I L K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 695 LGHGNEEHIRY---PKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 749
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V+P PT LSG A G QS A
Sbjct: 750 ALGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4561 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4620
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4621 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4655
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ CG ++ VL+S GELYTWG G LG G+ D + P V + V V+CG
Sbjct: 562 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA-LNGHMVVHVACGSGD 620
Query: 353 TAAI---SEGKILTWGWGG 368
+ + + G + +WG G
Sbjct: 621 SQTLCVTASGIVFSWGDGN 639
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 162/333 (48%), Gaps = 17/333 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P + + + CG +HTLFLT+ G +YA G ND
Sbjct: 6 WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + P R++ L+ ++ IS G HS A+T G+++ WG N+ GQLG
Sbjct: 66 GQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDA 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P P ++ + Q A G +A+T G++ +WG+ G+LG G S +
Sbjct: 126 ENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVP 184
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P LI+ L GV + A G HS + ++G ++ +G ++ + N
Sbjct: 185 M--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRC 236
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L + CG + LT+ G ++T G+ G LG GS P +V
Sbjct: 237 YPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV-FE 295
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGG 368
S + Q++CG +HT A S GKI +G GG
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGG 328
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 17/311 (5%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG L +L ++ RP ++ E + + ++CG AH+L LT G V++ G N G
Sbjct: 61 GNNDHGQLGHDLDTLPNK-RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG G P I + K VVQI++G +H A+T +GELY WG NS GQLG+G
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ KV P+PT ++ L+G+ A G S AV+ G + WG G+LG +
Sbjct: 180 SEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 233
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P ++ L + V+ + G S + G V+ G ++ ++
Sbjct: 234 ----SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV 289
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + +L S+ ++ CG HT S G++Y +G G LGIG + +P+ V+GP
Sbjct: 290 PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVRGP 349
Query: 338 FSESPVDQVSC 348
+ ++ C
Sbjct: 350 WFKTDFKSSDC 360
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 16/228 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG ++G+LGLG + + +P K++ + G ++ +T GK+ + G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH L + P+ + LE + + G HS + G+V+ +G
Sbjct: 63 NDHGQLGHD--------LDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114
Query: 264 DRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
AV + L + + R+P+ +I + + ++ G YH LT+ GELY WGSN G
Sbjct: 115 SNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQ 173
Query: 320 LGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LGIG+ + + P +Q + P+ ++CG H+ A+S+ G I WG
Sbjct: 174 LGIGTTSEKVPMPTLIQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWG 220
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG ++FLT G V+ G FGQ
Sbjct: 219 WGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLG 158
LG + + P ++ L ++ QI+ G H+ A + G++Y +G GQLG+G
Sbjct: 279 LG-HGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 163/334 (48%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P E +++ +ACG +T+ +T+ G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +I+ G H+ A+ G+L+ WG N NGQLGL
Sbjct: 64 GQLG-HEKARKRLQ--LIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P ++ L Q A G E S+A+T G++ +WG+ G+LG G
Sbjct: 121 VDCTE-RVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGS------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T+E P+ I L V + A G H+ I ++G V+ +G ++ +
Sbjct: 174 --YTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L ++ CG + LT G ++T G+ G LG G+ P +V
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVM-E 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 291 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 129/284 (45%), Gaps = 20/284 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG ++R R + + + +ACG HTL + E G +++ G N GQL
Sbjct: 59 GNNDYGQLG--HEKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116
Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P I L V VQI+ G HS A+T DGELY WG N GQLGLG
Sbjct: 117 GLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTT 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGF 220
I P ++ L+ + A G ++ ++ G V SWG G+LG Q+ ++
Sbjct: 177 TEIK-PKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNL--- 232
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P ++ L KV A G S + +G V+ G ++ +
Sbjct: 233 --------PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEIL 284
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
P + +L S ++ CG HT L S G +Y WG G LG
Sbjct: 285 PRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 17/227 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + I +P +V+ + +Q A G +VA+T GKV S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + L +LI L+ + A G H+ ++E G+++ +G
Sbjct: 61 NDYGQLGHEKARKRL-----------QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWG 109
Query: 264 DRAVDKMLFQEGNHARR-PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ + R P +I L + ++ CG H+ LT+ GELY WGSN G L
Sbjct: 110 CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQL 169
Query: 321 GIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G+GS P+R+ + P+ ++CG HT IS+ G + +WG
Sbjct: 170 GLGSYTTTEIKPKRI-STLAAVPIAFIACGGYHTIVISKSGAVFSWG 215
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL ++ R P + CG ++FLT G V+ G +GQ
Sbjct: 214 WGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 274 LGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 176/367 (47%), Gaps = 45/367 (12%)
Query: 33 STLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
ST+ R +W G + G+LG G+ + E + + +L HTL +T+ G
Sbjct: 46 STILRSDGTVWTTGRNNVGQLGNGTEKDS--SYFGKVDELYDVVSLDSDMDHTLAITKHG 103
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ G N G+ I+E P++I+GLK ++VQ+STG HS A+ G ++ WG+N
Sbjct: 104 TVWGWGYNSKGE--ITEGGKNIARPVQINGLK-DIVQVSTGLVHSLALDQSGAVWSWGEN 160
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG G IPTKVE LS I +A G E S+A++ GKV +WG G+LG
Sbjct: 161 IYGQLGNGTNQDS--SIPTKVEFLSNIVAIEA--GAEHSLALSNDGKVWAWGRNEFGQLG 216
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA---- 266
+G+ + PRL+K LE +++ A G HS +D +G ++ +G +
Sbjct: 217 NGE---------TEKSNIPRLVKNLE--NIEMIAGGDNHSLALDHDGAIWAWGYNSNGQI 265
Query: 267 ---------VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
D L ++ N L ++V G H+ LT GE+Y WG NE
Sbjct: 266 GDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEY 325
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS------HG 371
G LG GS+ P R S +D + G H+ A+ E ++ + WG + G
Sbjct: 326 GQLGNGSMKDSKVPLR--NNVGRSIID-IETGSYHSFAVDESGVI-YAWGDATYGQLGDG 381
Query: 372 TFSEDGH 378
TF +DG+
Sbjct: 382 TFGKDGN 388
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 45/317 (14%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGY--SLEPLRISGLKKE 124
E S+ ++ GG + L G V+ TG N+ GQLG ++ Y ++ L +
Sbjct: 32 ESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELY------D 85
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV + + H+ AIT G ++ WG NS G++ G K I P ++ L I Q +
Sbjct: 86 VVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEG---GKNIARPVQINGLKDIV--QVST 140
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G S+A+ G V SWG G+LG+G Q+SSI P ++ L + V I
Sbjct: 141 GLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI-----------PTKVEFLSNI-VAI 188
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
A G HS + +G+V+ +G ++ E + P L+ L E + G H+
Sbjct: 189 EA-GAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLA 247
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLH------------SPERVQGPFSESPVDQVSCGW 350
L G ++ WG N NG +G GS +V P ++ G + + V QVS G
Sbjct: 248 LDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGK--VKQVSAGI 305
Query: 351 KHTAAISE-GKILTWGW 366
KH+ A++E G++ WGW
Sbjct: 306 KHSTALTENGEVYAWGW 322
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 160/323 (49%), Gaps = 20/323 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GSL+ + PV A+ ++ A+ G H+L + G V+ G N+FGQ
Sbjct: 72 WGDNAYGQLGNGSLQDQRVPV--RAWGLWNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQ 129
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G P+++ GL EVV+++ G+ HS A+ DG ++ WG N G+LG G
Sbjct: 130 LGDGTTTGRQ-APVQVPGL-GEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQ 187
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ L I K A G S+A+ G G+V +WG+ +G+LG + G+
Sbjct: 188 RLMPV--QVQGLPTI--KAIAAGNAHSLALDGTGRVWAWGSNSNGQLG----DTTAGY-- 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P L+ L +AG HS +G +++G ++ P
Sbjct: 238 ---RMLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQ 292
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L + V+ H+ VL S G ++TWGSN+ G LG G+ + P +V G S
Sbjct: 293 QVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMG-LSGVV 351
Query: 343 VDQVSCGWKHTAAISEGKILTWG 365
G A ++ G++ TWG
Sbjct: 352 AVAAGSGQHSVAVMANGEVWTWG 374
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 157/374 (41%), Gaps = 72/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ GRLG G+ R PV ++KA+A G AH+L L TG V+A G N GQ
Sbjct: 172 WGSNGAGRLGDGTTTQRLMPVQVQGLP--TIKAIAAGNAHSLALDGTGRVWAWGSNSNGQ 229
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG GY + P + GL +S G +HS DG ++WG N+ GQLG G +
Sbjct: 230 LG-DTTAGYRMLPALVPGLTN-ATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTS 287
Query: 163 KVIP------------------------------------------------IPTKVECL 174
+ P +P +V L
Sbjct: 288 RSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGL 347
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SG+ A G + SVAV G+V +WG G+LG G +S Y+ +
Sbjct: 348 SGVVAVAAGSG-QHSVAVMANGEVWTWGHNVEGQLGEG-----------SSSYSAVPKRS 395
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEE 292
V+ AAG H +G V+ +GD A K +G A+R P+ + L
Sbjct: 396 HALVERTSVAAGRYHGLASKPDGTVWAWGDNA--KGQLGDGTTAQRLLPTQVPGLTNMVA 453
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V G + + L + G ++ WG N NG LG GS +P +V G + V ++ G H
Sbjct: 454 VAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPG---LTGVVSIAAGPGH 510
Query: 353 TAAI-SEGKILTWG 365
A+ ++G + TWG
Sbjct: 511 ALAVKADGTLWTWG 524
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 143/294 (48%), Gaps = 21/294 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
L +A G HTL + G V+A G N +GQLG + ++ P+R GL + + G
Sbjct: 50 LGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLG-NGSLQDQRVPVRAWGLWN-ISAVGAGD 107
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HS A+ DG ++ WG N+ GQLG G + P+ +V L + + A GF S+A+
Sbjct: 108 LHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPV--QVPGLGEVV--RVAAGFSHSLAL 163
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V +WG+ G+GRLG G +T P ++ L +K AAG HS
Sbjct: 164 KTDGTVWAWGSNGAGRLGDGT---------TTQRLMPVQVQGLP--TIKAIAAGNAHSLA 212
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+D GRV+ +G + ++ + P+L+ L + + G H+ V + G + W
Sbjct: 213 LDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVW 272
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G+N G LG G+ +P++V G + VD V H+ + S+G + TWG
Sbjct: 273 GANTYGQLGDGTTTSRSAPQQVSG---LAGVDGVLGAELHSLVLKSDGTVWTWG 323
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 147/325 (45%), Gaps = 26/325 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS R P + ++A G H L + G ++ G N+ GQ
Sbjct: 473 WGDNANGQLGNGSTTDRSNPTQVPGLT--GVVSIAAGPGHALAVKADGTLWTWGDNNTGQ 530
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ G+ VV ++ G +HS + VDG ++ WG N GQLG G
Sbjct: 531 LGDGTTVDRPI-PTQVPGVTG-VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTI 588
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P++ L+G+ A G S+A+ G V +WG G+LG+G
Sbjct: 589 R--PVPSQTPNLTGVVAITA--GLYHSLALKTDGTVWAWGYNLHGQLGNG---------N 635
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T++ P + G V + AG HS I +G V+ +G ++ P+
Sbjct: 636 TTTQQVPTQVPGFSG-GVSL-GAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPT 693
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP--ERVQGPFSE 340
++ + G +H+ L + G + WGSN+ G LG GS ++P R+ G
Sbjct: 694 QVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGL 753
Query: 341 SPVDQVSCGWKHTAAISEGKILTWG 365
+ D+ + A S+G + WG
Sbjct: 754 AAGDRFTA-----ARKSDGTVWAWG 773
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 139/294 (47%), Gaps = 23/294 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ R P + A+A G AH+L L G V+ G N +GQ
Sbjct: 822 WGNNAKGQLGDGTTTRRLVPTQVPGLT--GVVAVAAGYAHSLALKADGTVWGWGENIYGQ 879
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P + GL V+ +++G +H A DG L+ WG N++GQLG+G
Sbjct: 880 LGDGTTT-QRVAPTQAQGLTV-VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTT 937
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P T V LSG+ + A + S+A+ G V +WG +G+LG G
Sbjct: 938 RLAP--TLVPSLSGVVSLSAT--HQHSLALKPDGTVWAWGYNSNGQLGDGT--------- 984
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T+ + P L VK +AGF +S + +G V+ +G D+ G R
Sbjct: 985 TTTRHVPTQAPSLS--SVKAVSAGFEYSLAVKADGTVWSWGIN--DRGQLGSGTATPRAT 1040
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P+ ++ L ++ H V+++ G + +G NE G LG G + +P +V
Sbjct: 1041 PTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLIRLAPNQV 1094
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 19/294 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ + P S ++ LA G H + + G V+ G N GQ
Sbjct: 772 WGDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLAAGEGHVVVVKMDGTVWTWGNNAKGQ 829
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P ++ GL VV ++ GY HS A+ DG ++ WG+N GQLG G
Sbjct: 830 LGDGTTT-RRLVPTQVPGLTG-VVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQ 887
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V PT+ + L+ + + A G +A G + +WG G+LG G
Sbjct: 888 RV--APTQAQGLTVVLSM--ASGTYHGLARKADGTLWAWGYNAHGQLGIGT--------- 934
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ P L+ L GV V ++A HS + +G V+ +G + ++ P+
Sbjct: 935 TTTRLAPTLVPSLSGV-VSLSAT-HQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPT 992
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
L + V G ++ + + G +++WG N+ G LG G+ +P +V G
Sbjct: 993 QAPSLSSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQVAG 1046
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 149/326 (45%), Gaps = 26/326 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + A+ G H+L L G V+A G N GQ
Sbjct: 573 WGSNYEGQLGGGTTTIR--PVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQ 630
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + N P ++ G V + G +HS AI DG ++ WG N GQLG G +
Sbjct: 631 LG-NGNTTTQQVPTQVPGFSGG-VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTS 688
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ PT+V +G+ A G SVA+ G +WG+ G+LG G
Sbjct: 689 RT--TPTQVAGFTGV--SFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGS--------- 735
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ Y P L + V + AAG +A +G V+ +GD ++ R P+
Sbjct: 736 ARWHYAPTLSRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPA 792
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L E + G H V+ G ++TWG+N G LG G+ P +V G +
Sbjct: 793 QVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPG---LTG 849
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWG 367
V V+ G+ H+ A+ ++G + WGWG
Sbjct: 850 VVAVAAGYAHSLALKADGTV--WGWG 873
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 156/376 (41%), Gaps = 74/376 (19%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG YG+LG G+ SR P S + + H+L L G V+ G N G
Sbjct: 271 VWGANTYGQLGDGTTTSRSAPQQVSGLA--GVDGVLGAELHSLVLKSDGTVWTWGSNQRG 328
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG L P+++ GL V + HS A+ +GE++ WG N GQLG G +
Sbjct: 329 QLGDGTQE-QRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSS 387
Query: 162 AKVIP------------------------------------------------IPTKVEC 173
+P +PT+V
Sbjct: 388 YSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPG 447
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+ + A G S+A+ G V +WG +G+LG+G +T P +
Sbjct: 448 LTNMVA--VAAGHHSSLALKADGTVWAWGDNANGQLGNGS---------TTDRSNPTQVP 496
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
L GV V I AAG H+ + +G ++ +GD ++ +G RP + +++P V
Sbjct: 497 GLTGV-VSI-AAGPGHALAVKADGTLWTWGDNNTGQL--GDGTTVDRP-IPTQVPGVTGV 551
Query: 294 V---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
V G YH+ V+ G ++ WGSN G LG G+ + P + + + V ++ G
Sbjct: 552 VSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTP---NLTGVVAITAGL 608
Query: 351 KHTAAI-SEGKILTWG 365
H+ A+ ++G + WG
Sbjct: 609 YHSLALKTDGTVWAWG 624
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
++ + AAG H+ + +G V+ +GD A ++ R P L V G
Sbjct: 49 RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAVGAGDL 108
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
H+ + S G ++TWG N G LG G+ +P +V G E V +V+ G+ H+ A+ +
Sbjct: 109 HSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPG-LGE--VVRVAAGFSHSLALKT 165
Query: 358 EGKILTWG 365
+G + WG
Sbjct: 166 DGTVWAWG 173
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 22/333 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G +P I L + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGS--KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + KL S++VV CG HT VLT G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
S V Q++CG HT A S G I +G G
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG 322
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 134/280 (47%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + A + +ACG +H++ L++ G V++ G GQLG++ P I
Sbjct: 74 KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+ P +V+ L GI
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS-PQRVKSLDGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG SG+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRESPCHVKLLRSQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+HT S G +Y +G G LG G + P V+G
Sbjct: 304 HHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 22/288 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + FGQ GI N+ + ++ G + V +++ G +HS + DGE+Y G N+ G
Sbjct: 5 GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + +K P + L+G A G SVA++ G+V SWGAG G+LG
Sbjct: 65 QLGHESEGSK----PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
+ PRLIK+L + + G H + +G+ + +G + ++ L
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172
Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+E P + L P ++ V GG H+ L+ G ++ WG N +G LG+
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
SP V+ S+ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+ G G ++ E P++ + VK A G HS + E+G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVI-----IPE--PQVYGFIHDRNVKEVACGGNHSVFLLEDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY G ++ + +P LI L + V CG H+ L+ G++++WG+
Sbjct: 54 EVYTCGLNTKGQL--GHESEGSKPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFS 374
+G LG+ +I+ + R+ ++ + Q+SCG W A ++G+ TW
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTW---------- 161
Query: 375 EDGHSSGGQLDRGQLTPSE 393
G +S GQL G+ PS+
Sbjct: 162 --GQNSYGQLGLGKECPSQ 178
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 158/335 (47%), Gaps = 20/335 (5%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G+LG+G ++ + P C F LK + CGG H++FL G VY G N G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L +++ +S G HS A+ G+L+ WG GQLGLG
Sbjct: 64 QLG-HDKAGIS--PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTT 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V IP V+ L Q G + VA++ G++ +WG SG+LG G+
Sbjct: 121 ETTV-RIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEP---- 175
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S+ P +K L G+ + AG HS + +G V+ +G ++ +
Sbjct: 176 ----SKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAV 231
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P I K S++VV CG HT LT G L+T+G G LG GS + P RV
Sbjct: 232 PCHI-KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVL-E 289
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHG 371
+ V Q++CG HT A + + +G SHG
Sbjct: 290 LMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHG 324
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G +GQ
Sbjct: 213 WGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A + G +Y +G NS+GQLG G
Sbjct: 273 LG-HGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGIL 331
Query: 161 AAKVIPIPTKVECLSGIF 178
P P K S F
Sbjct: 332 GDARSPFPVKTSVPSEDF 349
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG G E + + + PR G +K G HS + +G
Sbjct: 1 MLCWGNAKDGQLGIGVEKNPV--------FEPRNCHVFSGRGLKEVGCGGQHSVFLMHDG 52
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ + + P ++ L + V CG H+ + G+L+ WG+
Sbjct: 53 SVYTCGSNSCGQLGHDKAGIS--PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAG 110
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 374
+ G LG+G+ + R+ + + QV CG +H A+S +G++ TW
Sbjct: 111 DGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTW---------- 160
Query: 375 EDGHSSGGQLDRGQLTPSE 393
G ++ GQL G+ PS+
Sbjct: 161 --GQNTSGQLGLGKGEPSK 177
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 158/320 (49%), Gaps = 23/320 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D+G+LG+ ++ RP + +K +ACG HT+ TE+GC+Y G N GQ
Sbjct: 60 FGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQ 119
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E+I S P+++ ++ ++ G HS A+T DGELY+WG S GQLGLG
Sbjct: 120 LGV-EDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDD 178
Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K P + T + +S A G+ + VT G+V ++G G G+LG G +
Sbjct: 179 KSTPTLLSTDNKVIS------VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYG---- 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-HAR 279
P+ + E K K A G H+ + E G+VY FG+ ++ + +
Sbjct: 229 ----KAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCE 282
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGP 337
P ++ ++ G HT ++T G+LYT+G + LG+ + P+R +
Sbjct: 283 TPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKR- 341
Query: 338 FSESPVDQVSCGWKHTAAIS 357
FS+ V QVSCG H ++
Sbjct: 342 FSKFIVTQVSCGGCHMIVLA 361
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 157/305 (51%), Gaps = 36/305 (11%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
K++ACG HT +TE+G ++ G+ND+GQLGI E + S P + LK E V+ ++ G
Sbjct: 39 KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDE-VKVSTRPCCVKKLKPEKVKVVACGR 97
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ T G LY +G N +GQLG+ + P+ KVEC + K A G + SVA+
Sbjct: 98 IHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPV--KVECEPRQY-KALAAGADHSVAL 154
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G++ WG G G+LG LG + S TP L+ KV A G+ H+A
Sbjct: 155 TDDGELYVWGGGSEGQLG-------LGDIDDKS--TPTLLS--TDNKVISVACGYYHTAF 203
Query: 253 IDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
+ + G V+ FG+ K+ + A P ++ ++ V CGG HT VLT G++YT
Sbjct: 204 VTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSHTVVLTECGKVYT 263
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESP--------VDQVSCGWKHTAAISE-GKIL 362
+G NG LG + + + E+P V Q++ G HTA ++E G++
Sbjct: 264 FGEGGNGQLG----------HKNKYFYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLY 313
Query: 363 TWGWG 367
T+G G
Sbjct: 314 TFGDG 318
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG ++ + P + S K + ++ACG HT F+T+ G V+ G D G
Sbjct: 162 VWGGGSEGQLGLGDIDDKSTPTLLSTDNK--VISVACGYYHTAFVTDVGEVFTFGEGDGG 219
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + G ++ P +++ + ++ ++ G H+ +T G++Y +G+ NGQLG
Sbjct: 220 KLGQGTDYGKAVAPKKVN-IPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLG---HK 275
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K T V Q A G + VT G++ ++G G +LG E
Sbjct: 276 NKYFYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE 328
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSEEV 293
+ G K K A G H+A + E+GR++ FG ++ E + RP + KL P +V
Sbjct: 33 VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92
Query: 294 V-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V CG HT V T G LYT+G+N +G LG+ I + P +V+ ++ G H
Sbjct: 93 VACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVE--CEPRQYKALAAGADH 150
Query: 353 TAAIS-EGKILTWGWGGSHGTF 373
+ A++ +G++ WG GGS G
Sbjct: 151 SVALTDDGELYVWG-GGSEGQL 171
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
++ V CG HT ++T G L+T+G N+ G LGI + V P V+ E V V+CG
Sbjct: 38 AKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEK-VKVVACG 96
Query: 350 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
HT +E G + T+G G ED SS
Sbjct: 97 RIHTIVATESGCLYTFGANGDGQLGVEDIPSSN 129
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G +++ G + G
Sbjct: 3312 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDG 3371
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3372 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3430
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3431 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3483
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3484 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3539
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G GS V P V
Sbjct: 3540 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVH- 3598
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 3599 ELDDARVNRVSCGSSHSIA 3617
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4377 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4436
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4437 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4488
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4489 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4545
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H T GE++TWG N+ G LG G+ L P V
Sbjct: 4546 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4604
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4605 LQGKKITRVACGSAHTLAWSTMK 4627
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3365 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3424
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L S + + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3425 LGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3484
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3485 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3539
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3540 ------RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGSTI 3589
Query: 279 --RRPSLISKLPYSE--EVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3590 VNKKPSLVHELDDARVNRVSCGSSHS 3615
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 153/332 (46%), Gaps = 23/332 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG PV+C + L G L +T G VYATG G+
Sbjct: 4264 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4323
Query: 103 LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG G
Sbjct: 4324 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4381
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4382 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4434
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+ +
Sbjct: 4435 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4490
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ P I L +V CG + LT G +YTWG + LG G+ D + P +V
Sbjct: 4491 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4550
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ ++ G H A ++ G++ TWG
Sbjct: 4551 AA-LQGKKIISIATGSLHCVACTDKGEVFTWG 4581
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 166/347 (47%), Gaps = 28/347 (8%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCV 92
Q +WG D +LG G S+ + PV K LK + GG+ TLF+ ++ G +
Sbjct: 3252 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKL 3308
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGK 149
YA G G+LG+ ++ EP I L + +++ + +G H+ A+T DG+++ WG+
Sbjct: 3309 YACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGE 3367
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+G+LG G + + P +E L + A G S A+T G++ +WG G GRL
Sbjct: 3368 GEDGKLGHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3425
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAV 267
GHG + ++ P+L++ L G +V A G + + +G VY +GD
Sbjct: 3426 GHGD---------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDF 3476
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
K+ + P LI +L ++ CG + LT GE++TWG + LG G+
Sbjct: 3477 GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGND 3536
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ P V+G V V+ G H A+++ G++ WG HG
Sbjct: 3537 HHVRKPTLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWG-DNDHG 3581
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4370 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4429
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4430 LGHGDSED-QLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4487
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4488 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4544
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4545 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4597
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4598 RPRLVHALQGKKITRVACGSAHT 4620
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4317
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4318 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4375
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4376 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
++ + P L+ L + +V CG T +T +++WG + G LG
Sbjct: 4427 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4486
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4487 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH 4534
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LT+ VY+ G D G+LG + + Y L + + K + I+ G +S+ ++
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 565
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
+GELY WG+ + G+LG G + + IPT V L+G A G Q++ VT G
Sbjct: 566 SNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGI 623
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G TP+++ +L + V G SA + G
Sbjct: 624 VFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 674
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ H R P +I L +E+ G +H LT +Y WG N
Sbjct: 675 EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRN 734
Query: 316 ENG 318
+ G
Sbjct: 735 DYG 737
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 31/313 (9%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C A + +K L C + L+ +G VY Q P R+ G
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 492
Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
++ V + + H A+T D +Y WG G+LG G + P VE L
Sbjct: 493 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 550
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S ++ G++ +WG G GRLGHG ++L P L+ L G
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 601
Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
V A +G + C+ +G V+ +GD K+ + ++ P ++ KL +V
Sbjct: 602 MVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 661
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CGG + LT+ GE+YTWG E LG G+ + + P+ ++ V ++ G H
Sbjct: 662 CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV-LKPKKVKELCVGNFHVL 720
Query: 355 AISEGKILTWGWG 367
A++E + L +GWG
Sbjct: 721 ALTEDQ-LVYGWG 732
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 124 EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
E+VQ H S +Y+WG N QLG G K +K I +P E LS +
Sbjct: 3235 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3292
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + V+ GK+ + G G +GRLG G +S++ P+LI L +K
Sbjct: 3293 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3343
Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
A +G H+ + ++G+++ +G+ K+ +P LI L ++ CG
Sbjct: 3344 VAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3403
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AA 355
H+ +TS GELYTWG E G LG G P+ VQ + V QV+CG + A
Sbjct: 3404 HSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQR-VIQVACGSRDAQTMAL 3462
Query: 356 ISEGKILTWGWG--GSHGTFSEDGHSSGGQLDR 386
++G + +WG G G G DG + +DR
Sbjct: 3463 TADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDR 3495
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + A ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 521 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 580
Query: 103 L--GISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
L G S+N+ L P ++ L + V +G + +T G ++ WG + G+LG
Sbjct: 581 LGHGNSDNV---LIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 637
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G P V+ L I + G + S A+T G+V +WG G RLGHG E I
Sbjct: 638 GGCDGS--KTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHI 695
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P++I+ L+ KVK G H + E+ VY +G ++ G
Sbjct: 696 ---------RYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTI 746
Query: 278 ARRPSLISKL 287
P+L L
Sbjct: 747 VPEPTLCPTL 756
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 103/251 (41%), Gaps = 69/251 (27%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +P E LS + Q G + +AVT GKV +
Sbjct: 4259 GAIYGWGHNHRGQLG-GLEGAKV-KLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYAT 4316
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G +GRLG G S++ P L++ ++ V VK A
Sbjct: 4317 GYGAAGRLGIGGTDSVM---------VPTLLESIQHVFVKKVA----------------- 4350
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V GG H L+S G +Y+WG ++G LG
Sbjct: 4351 -------------------------------VNSGGKHCLALSSEGHVYSWGEGDDGKLG 4379
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSS 380
G+ + P+ ++ VD ++CG H+AAI S G + TWG G + GH
Sbjct: 4380 HGNRLMYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWG----KGRYGRLGHGD 4434
Query: 381 GGQLDRGQLTP 391
QLTP
Sbjct: 4435 S----EDQLTP 4441
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 627 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 686
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E+I Y P I LK K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 687 LGHGNEEHIRY---PKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 741
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
++P PT LSG A G QS A
Sbjct: 742 ALGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4528 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4587
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4588 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4622
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ CG ++ VL+S GELYTWG G LG G+ D + P V + V V+CG
Sbjct: 554 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA-LNGHMVVYVACGSGD 612
Query: 353 TAAI---SEGKILTWGWGG 368
+ + + G + +WG G
Sbjct: 613 SQTLCVTASGIVFSWGDGN 631
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 21/327 (6%)
Query: 53 LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGY 111
LG ++++PV SA E +K +ACG HTL +++ G V G ND GQ G++ +I
Sbjct: 69 LGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIEN 128
Query: 112 SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
P + L + V++ G HS A+T DG L+ WG N+ GQLG+G PT+
Sbjct: 129 KPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTE 188
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ L G+ + A G S A+T G V WG G+LG G + ++ P
Sbjct: 189 LTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKAYPT 239
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L++ + VK A G H+A + +G V++FG + ++ + P + L S
Sbjct: 240 LLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGS 299
Query: 291 E--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+ +V CG +HT VL S G LY +G +G LG +P+RV GP+ V
Sbjct: 300 DITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPW-------VP 352
Query: 348 CGWKHTAAISEGKILTWGWGGSHGTFS 374
+ S+G+++ + G H FS
Sbjct: 353 HSSTEKNSSSKGRVVRCIYAGGHHCFS 379
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 21/312 (6%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKK-EV 125
E +K +ACG HTL +++ V G ND GQ G++ +I P + L +
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V++ G HS A+T DG L+ WG N+ GQLG+G PT++ L G+ + A G
Sbjct: 484 VKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 543
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S A+T G V WG G+LG G + ++ P L++ + VK A
Sbjct: 544 GFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKSYPTLLRNMRSQMVKHIAC 594
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
G H+A + +G V++FG + ++ + P + L S+ +V CG +HT VL
Sbjct: 595 GQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654
Query: 304 T-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
S G LY +G +G LG +P+RV GP+ S K+++ S+G+++
Sbjct: 655 EGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPH-----SSTAKNSS--SKGRVV 707
Query: 363 TWGWGGSHGTFS 374
+ G H FS
Sbjct: 708 RCIYAGGHHCFS 719
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 20/342 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG+G + V + +++++CG HT + + G +Y G N
Sbjct: 6 WGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANS 65
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG N +P+++S L+ V++ ++ G H+ A++ G++ WG+N GQ GL
Sbjct: 66 KGQLGQDRN---QYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLA 122
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P P ++ L+ + G S+A+T G++ SWG G+LG +
Sbjct: 123 TGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLG-------I 175
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G L + P + L GV + A G HS + +G V+ +G V ++ +
Sbjct: 176 GTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENK 235
Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+L+ + + + CG HT +LT+ G ++ +G G LG GS +P +V
Sbjct: 236 AYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVID 295
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSED 376
S + QV+CG HT + S+G++ +G G HG +D
Sbjct: 296 -LMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ-GIHGQLGQD 335
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+ GL G +E++ RP + + + CG H++ LT G +++ G N +
Sbjct: 451 WGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 510
Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLGI + Y+ P ++ L+ +V+++ G HS A+T+ G ++ WGKN GQLGLG
Sbjct: 511 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 570
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K K PT + + K A G + + +T G V +G G G+LGHG
Sbjct: 571 NKENK--SYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 623
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIFG 263
+ +E PR + +L G + G H+ ++ GR+Y FG
Sbjct: 624 ----NYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFG 665
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 161/352 (45%), Gaps = 39/352 (11%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+LG+G+L + + RP ++ L +ACGG H+ LT +G V+ G ND
Sbjct: 165 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 224
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+ EN Y P + ++ ++V+ I+ G H++ +T DG ++++G+ S GQLG
Sbjct: 225 GQLGLGNKENKAY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 281
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
G +V P KV L G Q G ++ + G G++ ++G G G+LG + S
Sbjct: 282 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 339
Query: 217 ILGFLRSTSEYTPRLIKEL----EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R + P E +G V+ AG H N D K+LF
Sbjct: 340 CSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNA-----ADDIQIKLLF 394
Query: 273 QEGNHARRPSLISKLPYS-----------------EEVVCGGYHTCVLTSGGELYTWGSN 315
++ + L + V CG HT ++ ++ WG N
Sbjct: 395 RDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRN 454
Query: 316 ENGCLGIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+ G G+ + D+ + P R+ + +V CG H+ A++ +G++ +WG
Sbjct: 455 DRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWG 506
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+LG+G+L + + RP ++ L +ACGG H+ LT +G V+ G ND
Sbjct: 505 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 564
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+ EN Y P + ++ ++V+ I+ G H++ +T DG ++++G+ S GQLG
Sbjct: 565 GQLGLGNKENKSY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 621
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
G +V P KV L G Q G ++ + G G++ ++G G G+LG + S
Sbjct: 622 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 679
Query: 217 ILGFLRSTSEYTP 229
R + P
Sbjct: 680 CSNPQRVPGPWVP 692
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 166/334 (49%), Gaps = 22/334 (6%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+G+ P C S+K +ACGG H +FL E G VY GLN
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMT 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 121 TEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 177 -----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + KL +++VV CG HT VLT G ++T+G+ G LG S++ +P RV
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGG 368
S V Q++CG +HT A S G I +G G
Sbjct: 290 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
HT S G +Y +G G LG G + P V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 24/261 (9%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ V +++ G H + DGE+Y G N+ GQLG ++ + P ++ L+
Sbjct: 34 RSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ----PEQIGALADQHIIHV 89
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKV 240
A G S+A++ G++ SWGAG G+LG L +T + PRLI++L +
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLG----------LMTTEDSVAVPRLIQKLNQQTI 139
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCG 296
+ G H + +G+ + +G + ++ F +R + +P ++ V G
Sbjct: 140 LQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-VAAG 198
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G H+ L+ G ++ WG N G LG+ SP V+ ++ V +SCG +HTA +
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVL 257
Query: 357 SE-GKILTWGWGGSHGTFSED 376
++ G + T+G GS G D
Sbjct: 258 TKSGGVFTFG-AGSCGQLGHD 277
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 155/323 (47%), Gaps = 23/323 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL--TETGCVYATGLNDF 100
WG+G G LG G P V A +++K LACG HT+F E G VY+ GL +
Sbjct: 4 WGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACG-LHTVFALNAEDGKVYSWGLGKY 62
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV---DGELYMWGKNSNGQLG 156
G LG N+ PL+I+ K V+ IS H++A+T G +Y +G NSN QLG
Sbjct: 63 GILG-QGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLG 121
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+G + P V L+ + A G S A++ G + WG G G+LG
Sbjct: 122 VGD--TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLG------ 173
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++E T I E + KV A G LH+ + G VY FG ++ N
Sbjct: 174 -LGNYNLSTEPTILHIGE-KKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMN 231
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P IS S+ V CG +H+ +T G+LY WG +G LG+G SP
Sbjct: 232 KFHLPYRIS-FNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTE 290
Query: 334 VQGPFSESPVDQVSCGWKHTAAI 356
V+G F + + +++CG KHTAA+
Sbjct: 291 VEG-FRDKKIGRIACGSKHTAAL 312
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKN 150
VY G G LG E+I + + L + +++ G H A+ DG++Y WG
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G LG G ++ P+ S + L +VT G V S+G + +L
Sbjct: 61 KYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQL 120
Query: 210 GHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G T Y P+L+ L + A G HSA + G ++++G
Sbjct: 121 GVGD----------TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDG 170
Query: 269 KMLFQEGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++ N + P+++ K +V CG HTC+LT GG +Y +GSN G + S+
Sbjct: 171 QLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSM 230
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ H P R+ S+ V VSCG H+AAI+E GK+ WG
Sbjct: 231 NKFHLPYRISFNTSKRFV-SVSCGSFHSAAITENGKLYAWG 270
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 27 CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTL 84
C ++ S+ L + LWG GD G+LGLG+ P + EK + + +ACG HT
Sbjct: 147 CGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTC 206
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE 143
LT G VYA G N +GQ+ + L P RIS K V +S G HS+AIT +G+
Sbjct: 207 ILTVGGLVYAFGSNIYGQIAAPSMNKFHL-PYRISFNTSKRFVSVSCGSFHSAAITENGK 265
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LY WG ++G+LGLG K PT+VE
Sbjct: 266 LYAWGLETDGRLGLGD--CKQRSSPTEVE 292
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDE 255
V +WG+G +G LGHG++ I +PR+++ L +K A G LH+ A E
Sbjct: 1 VYTWGSGINGALGHGEDIDIP---------SPRVVEALLAYNIKRLACG-LHTVFALNAE 50
Query: 256 NGRVYIFGDRAVDKM-LFQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTS---GG 307
+G+VY +G + K + +GN R P I+ S ++ C H +TS G
Sbjct: 51 DGKVYSWG---LGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTG 107
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 366
+Y++G N N LG+G + P+ V ++ + +V+CG H+AA+S +G + WG
Sbjct: 108 SVYSFGDNSNSQLGVGDTEPYAEPQLVT-VLNDENIIKVACGKYHSAALSAKGNLFLWGL 166
Query: 367 G 367
G
Sbjct: 167 G 167
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 153/340 (45%), Gaps = 47/340 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 334 WGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV------------TGGGKVLSWGAGGS 206
+ K I +P +VE L G+ T QAA G + AV GK+ +WG G
Sbjct: 453 DR--KSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + +G VY G
Sbjct: 511 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGS-- 559
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 560 --PVYGQLGN----PLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 613
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D +SP V+ + V ++CG TAAI
Sbjct: 614 NGRLGHGDTDDRNSPSLVEA-LKDKQVKSIACGTSFTAAI 652
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 158/320 (49%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G +++ G G+LG + ++ + P I L ++ ++
Sbjct: 312 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV---MHPKLIDALSNTNIELVA 368
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 369 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 426
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG SI P+ ++ L+G++ AA G
Sbjct: 427 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSI---------SLPKEVESLKGLRTVQAACG 477
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ + P+ ++ L P
Sbjct: 478 VWHTAAVIEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNF 535
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG T T+ G +YT GS G LG D P RV+G S+S V++++CG
Sbjct: 536 CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADG-KLPTRVEGKLSKSFVEEIACGA 594
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S+ ++ TWG G +
Sbjct: 595 YHVAVLTSKTEVYTWGKGAN 614
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P +E + + A G + + VT G++ SWG GRLGHG +S ++
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM-------- 351
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 352 -HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 410
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT V+TS G+L+T+G G LG G + P+ V+
Sbjct: 411 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLR 470
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V Q +CG HTAA+ E GK+ TWG G
Sbjct: 471 TV-QAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDG 508
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G ++ +G+ + ++ + P LI L
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ +V H P+RV GP V
Sbjct: 361 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 419
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 420 SSISCGPWHTAVVTSAGQLFTFG----DGTFGVLGH 451
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 46/347 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
+G D G+LG G+ + RP V S F + + A++CG HT+ LT +
Sbjct: 11 FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G VY+ G GQLG ++ EP +I+ ++E ++ IS G HS+A+T DG LY+
Sbjct: 68 GAVYSWGWGSMGQLG-HGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYV 126
Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
WG++ GQLGL K+ A + +P+ + E +G + + G + A+T G+V WG
Sbjct: 127 WGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWG 186
Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G SG+LG G + S++G R P L+K G KV A G HSA + E
Sbjct: 187 RGDSGQLGIGSVWMKDPENESLMGASR------PHLLKAFNGEKVVQVACGAFHSAAVTE 240
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELY 310
G VY++G + + + + P +L Y ++ V CGG+HT V+ G+ Y
Sbjct: 241 QGHVYVWGKEDYGMLGVGQSSDQQIP---KRLEYFDDIPVLRVSCGGWHTVVVAKSGDCY 297
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+G E G LG+G P V+ V Q +CG HT ++
Sbjct: 298 AFGRGEYGRLGLGDTKSRTRPHLVKA-LKGKTVIQAACGGSHTLFVT 343
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 155/333 (46%), Gaps = 31/333 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLNDF 100
WG G G+LG G L+ P + FE+ L+ ++CGG H+ +T+ G +Y G + +
Sbjct: 73 WGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHW 132
Query: 101 GQLGISENIGYSLEPLRISGLKKE------VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG+ + + E L + E +V++S G H++A+T G +Y+WG+ +GQ
Sbjct: 133 GQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQ 192
Query: 155 LGLGKKAAKV--------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
LG+G K P ++ +G Q A G S AVT G V WG
Sbjct: 193 LGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDY 252
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LG GQ S+ + P+ ++ + + V + G H+ + ++G Y FG
Sbjct: 253 GMLGVGQ---------SSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGE 303
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + RP L+ L + CGG HT +TS G Y G ++G LG+
Sbjct: 304 YGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLAD 363
Query: 325 IDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAI 356
+ L P R+ GP PV Q S G H+ A+
Sbjct: 364 MKALGVPTRLDLGPI---PVRQFSAGGAHSVAL 393
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 49/307 (15%)
Query: 86 LTETGCVY-ATGLNDFGQLGIS---------ENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++ + CV A G ND GQLG +++ S P +I L E +V +S G H
Sbjct: 1 MSNSECVVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRH 60
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE------- 187
+ A+T G +Y WG S GQLG G K+I P K+ F +Q L +
Sbjct: 61 TMALTSSGAVYSWGWGSMGQLGHGD--LKIINEPQKIA-----FFEQERLEVDYISCGGC 113
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG----VKVKIA 243
S AVT G + WG G+LG +E + E P EG VK++
Sbjct: 114 HSAAVTKDGTLYVWGESHWGQLGLPKE------YEAAHESLPVKCPMPEGEAGETIVKVS 167
Query: 244 AAGFLHSACIDENGRVYIFG-----DRAVDKMLFQEGNH-----ARRPSLISKLPYSE-- 291
G H+A + GRVY++G + + ++ + A RP L+ +
Sbjct: 168 CGG-THTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVV 226
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+V CG +H+ +T G +Y WG + G LG+G P+R++ F + PV +VSCG
Sbjct: 227 QVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEY-FDDIPVLRVSCGGW 285
Query: 352 HTAAISE 358
HT +++
Sbjct: 286 HTVVVAK 292
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 115/240 (47%), Gaps = 31/240 (12%)
Query: 42 LWGNGDYGRLGL-----GSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVY 93
+WG +G+LGL + ES PV C E ++ ++CGG HT LT G VY
Sbjct: 126 VWGESHWGQLGLPKEYEAAHESL--PVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVY 183
Query: 94 ATGLNDFGQLGI---------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGE 143
G D GQLGI +E++ + P + E VVQ++ G HS+A+T G
Sbjct: 184 VWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGH 243
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y+WGK G LG+G+ + + IP ++E I + + G +V V G ++G
Sbjct: 244 VYVWGKEDYGMLGVGQSSDQ--QIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGR 301
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLG G + S P L+K L+G V AA G H+ + +G Y+ G
Sbjct: 302 GEYGRLGLGD---------TKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAG 352
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 115/246 (46%), Gaps = 35/246 (14%)
Query: 147 WGKNSNGQLGLGKKAAKVIPI--------PTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+G N +GQLG G K + I P ++ L + G ++A+T G V
Sbjct: 11 FGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAV 70
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG L+ +E E E ++V + G HSA + ++G
Sbjct: 71 YSWGWGSMGQLGHGD-------LKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGT 123
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELY 310
+Y++G+ ++ + A SL K P E +V CGG HT LTS G +Y
Sbjct: 124 LYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVY 183
Query: 311 TWGSNENGCLGIGSIDVLHSPER----------VQGPFSESPVDQVSCGWKHTAAISE-G 359
WG ++G LGIGS+ + PE + F+ V QV+CG H+AA++E G
Sbjct: 184 VWGRGDSGQLGIGSV-WMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQG 242
Query: 360 KILTWG 365
+ WG
Sbjct: 243 HVYVWG 248
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG DYG LG+G + P F+ + ++CGG HT+ + ++G YA G ++G
Sbjct: 246 VWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYG 305
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+ + + P + LK K V+Q + G H+ +T DG Y+ G+ +G+LGL
Sbjct: 306 RLGLGDTKSRT-RPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLAD- 363
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K + +PT+++ L I +Q + G SVA+
Sbjct: 364 -MKALGVPTRLD-LGPIPVRQFSAGGAHSVAL 393
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 165/329 (50%), Gaps = 30/329 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +S PV + A++ G H+L L G V+A G N GQ
Sbjct: 20 WGGNALGQLGDGSSDSHSEPVRVRGLS--GVVAVSAGEGHSLALHRDGTVWAWGDNALGQ 77
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S EP+R+ GL VV +S G +HS A+ DG ++ WG N++ QLG G A
Sbjct: 78 LGDGTSDSHS-EPVRVPGLSG-VVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGA 134
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P ++E LS + A G S+AV G V +WG +G+LG G IL
Sbjct: 135 QSYSVPWRLEDLSEVVA--VAAGGNHSLAVRADGTVWAWGDNFAGQLGDGN---IL---- 185
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----H 277
T+ + P+ ++ L GV A+AG+ HS +G V+ +G+ ++ GN +
Sbjct: 186 -TTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAWGNNTSGQL----GNGISVGY 238
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L V GG ++ L S G L+ WGSN++G G GS L S RV+
Sbjct: 239 GALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVR-- 296
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
S V ++ G H+ A+ S+G + WG
Sbjct: 297 -WLSGVVAMAAGSAHSLAVRSDGTLWAWG 324
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 156/335 (46%), Gaps = 24/335 (7%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG G+ L +RW P + A + G AH++ G V+A G N G
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPKQVQGLS--GVVAASAGWAHSMVALSDGSVWAWGNNTSG 228
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++GY P ++ GL+ V+ ++ G +S A+ DG L+ WG N +GQ G G
Sbjct: 229 QLGNGISVGYGALPEQVQGLRG-VMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTV 287
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +V LSG+ A G S+AV G + +WGA G+LG G
Sbjct: 288 --YLSSSVRVRWLSGVVAMAA--GSAHSLAVRSDGTLWAWGANYYGQLGDGTRKD----- 338
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP+ ++ L +V AAG HS + +G V+ +G ++ N + P
Sbjct: 339 ----HDTPKRVQGLS--RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP 392
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ +L V G H+ + S G ++ WG N G LG GS+ P RVQG S
Sbjct: 393 LHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQG---LS 449
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
V VS G H+ A ++G + WG G S G E
Sbjct: 450 GVAAVSAGLNHSLARGTDGGVWAWG-GNSFGQLGE 483
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 153/331 (46%), Gaps = 37/331 (11%)
Query: 43 WGNGDYGRLGLGS-------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG+ D+G+ G GS + RW V A+A G AH+L + G ++A
Sbjct: 273 WGSNDHGQRGDGSTVYLSSSVRVRWLSGVV---------AMAAGSAHSLAVRSDGTLWAW 323
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G N +GQLG + P R+ GL + VV ++ G HS A+ DG ++ WG N +GQL
Sbjct: 324 GANYYGQLGDGTRKDHD-TPKRVQGLSR-VVAVAAGDGHSIALCADGTVWTWGYNHDGQL 381
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G P+P V LSG+ A G S+AV G V +WG G+LG G
Sbjct: 382 AHGSTNDS--PVPLHVRELSGVVA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGS-- 435
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
L S++E P ++ L GV +AG HS +G V+ +G + ++
Sbjct: 436 -----LSSSAE--PVRVQGLSGVAA--VSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTT 486
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
++A P + L E + G H+ S G L+ WG N G LG G+ P RVQ
Sbjct: 487 SNALVPVRVRGLSGVETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQ 546
Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G S V V G H+ A+ ++G + WG
Sbjct: 547 G---LSGVAAVFAGLNHSLAVRTDGSVWAWG 574
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 159/327 (48%), Gaps = 26/327 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +S PV + A++ G H+L L G V+A G N+ Q
Sbjct: 70 WGDNALGQLGDGTSDSHSEPVRVPGLS--GVVAVSAGDNHSLALRSDGSVWAWGDNNSDQ 127
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P R+ L EVV ++ G +HS A+ DG ++ WG N GQLG G
Sbjct: 128 LGGAPGAQSYSVPWRLEDLS-EVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILT 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V+ LSG+ A G+ S+ G V +WG SG+LG+G +G+
Sbjct: 187 TRW-LPKQVQGLSGVVAASA--GWAHSMVALSDGSVWAWGNNTSGQLGNGIS---VGY-- 238
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV AAG L+S + +G ++ +G D +G+ S
Sbjct: 239 ---GALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSN--DHGQRGDGSTVYLSS 291
Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
+ ++ + VV G H+ + S G L+ WG+N G LG G+ +P+RVQG
Sbjct: 292 SV-RVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQG--- 347
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWG 365
S V V+ G H+ A+ ++G + TWG
Sbjct: 348 LSRVVAVAAGDGHSIALCADGTVWTWG 374
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 155/329 (47%), Gaps = 25/329 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ + P + + A+A G H++ L G V+ G N GQ
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLSR--VVAVAAGDGHSIALCADGTVWTWGYNHDGQ 380
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + S PL + L VV ++ G HS A+ DG ++ WG N GQLG G ++
Sbjct: 381 L-AHGSTNDSPVPLHVRELSG-VVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS 438
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +V+ LSG+ A G S+A G V +WG G+LG G S+ L
Sbjct: 439 SAEPV--RVQGLSGVAAVSA--GLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNAL---- 490
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV+ +AGF HS +G ++ +G ++ +++ P
Sbjct: 491 -----VPVRVRGLSGVET--ISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPV 543
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L V G H+ + + G ++ WG N G LG G+ + +P RVQG S
Sbjct: 544 RVQGLSGVAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQG---LSG 600
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
++ V+ G H+ ++ S+G + W WG +H
Sbjct: 601 METVAAGSLHSLSVGSDGSM--WSWGNNH 627
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 170/383 (44%), Gaps = 28/383 (7%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALW--GNGDYGRLGLG-SLES 58
LG T++ KQ L + W S + ++W GN G+LG G S+
Sbjct: 179 LGDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGY 238
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
P + A+A GG ++L L G ++A G ND GQ G + Y +R+
Sbjct: 239 GALPEQVQGLR--GVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTV-YLSSSVRV 295
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L VV ++ G HS A+ DG L+ WG N GQLG G + K P +V+ LS +
Sbjct: 296 RWLSG-VVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTR--KDHDTPKRVQGLSRVV 352
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S+A+ G V +WG G+L HG + P ++EL GV
Sbjct: 353 A--VAAGDGHSIALCADGTVWTWGYNHDGQLAHGS---------TNDSPVPLHVRELSGV 401
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
AAG LHS + +G V+ +G ++ + + P + L V G
Sbjct: 402 VA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLSGVAAVSAGLN 459
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAIS 357
H+ + G ++ WG N G LG G+ P RV+G S V+ +S G+ H+ A S
Sbjct: 460 HSLARGTDGGVWAWGGNSFGQLGEGTTSNALVPVRVRG---LSGVETISAGFNHSLARAS 516
Query: 358 EGKILTWGWGGSHGTFSEDGHSS 380
+G + W WGG++ DG +S
Sbjct: 517 DGGL--WAWGGNYTGQLGDGTTS 537
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 143/295 (48%), Gaps = 26/295 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L L G V+A G N GQLG + +S EP+R+ GL VV +S G HS
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHS-EPVRVRGLSG-VVAVSAGEGHS 58
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N+ GQLG G + P+ +V LSG+ A G S+A+
Sbjct: 59 LALHRDGTVWAWGDNALGQLGDGTSDSHSEPV--RVPGLSGVVAVSA--GDNHSLALRSD 114
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG S +LG G + S P +++L +V AAG HS +
Sbjct: 115 GSVWAWGDNNSDQLG--------GAPGAQSYSVPWRLEDLS--EVVAVAAGGNHSLAVRA 164
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+G V+ +GD ++ +GN P + L G H+ V S G ++ W
Sbjct: 165 DGTVWAWGDNFAGQL--GDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVWAW 222
Query: 313 GSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G+N +G LG G S+ PE+VQG V V+ G ++ A+ S+G + WG
Sbjct: 223 GNNTSGQLGNGISVGYGALPEQVQGLRG---VMAVAAGGLYSLALRSDGTLWAWG 274
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + PV + A+ G H+L + G V+A G+N FGQ
Sbjct: 523 WGGNYTGQLGDGTTSNSSVPVRVQGLS--GVAAVFAGLNHSLAVRTDGSVWAWGINSFGQ 580
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+R+ GL + ++ G HS ++ DG ++ WG N +GQLG G
Sbjct: 581 LG-EGTTNTSFAPVRVQGLSG-METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHGLPGR 638
Query: 163 KVIPI 167
P+
Sbjct: 639 SPTPV 643
>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
Kuenenia stuttgartiensis]
Length = 387
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 143/283 (50%), Gaps = 19/283 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +S P+ E + A++CGG H L L G V+A G+ND GQ
Sbjct: 111 WGGNWAGQLGDGSYKSSNIPIKTK--ELSGIIAISCGGQHNLALKSDGTVWAWGINDKGQ 168
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LGI + + P+RI GL +V IS G +HS AI DG L+ WG N+ QLG G
Sbjct: 169 LGIGDAKNQQI-PIRIPGL-NNIVAISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATN 226
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L I G + S+A+ G +++WG+ G +LG G
Sbjct: 227 RCSPV--HVSNLRDIIAVNG--GGDFSLALKSDGTIMAWGSNGLSQLGDGT--------- 273
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + ++ + ++IAA G HS + G+V+ FG + A RP
Sbjct: 274 TTNRNTPVNVSDVRDI-IEIAAKGN-HSLALTIEGKVWEFGSIGATPTEKEVTLPAYRPV 331
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
L++++ + CG +H VL + G L+ WG N G LG G++
Sbjct: 332 LVNEITDVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDGTV 374
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 142/303 (46%), Gaps = 21/303 (6%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
V ++F +A G HTL L G +++ G N++GQLG I P+++ L
Sbjct: 30 VKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLG-DGTIKNKHSPVQVKHLSS 88
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I G HS A+ DG ++ WG N GQLG G + IPI TK LSGI +
Sbjct: 89 IIV-IDGGAWHSIALKSDGTVWAWGGNWAGQLGDGSYKSSNIPIKTKE--LSGIIA--IS 143
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + ++A+ G V +WG G+LG G + ++ P I L + V I+
Sbjct: 144 CGGQHNLALKSDGTVWAWGINDKGQLGIGD---------AKNQQIPIRIPGLNNI-VAIS 193
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
A G+ HS I +G ++ +G ++++ + P +S L V GG + L
Sbjct: 194 AGGY-HSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSPVHVSNLRDIIAVNGGGDFSLAL 252
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 362
S G + WGSN LG G+ ++P V + +++ H+ A++ EGK+
Sbjct: 253 KSDGTIMAWGSNGLSQLGDGTTTNRNTPVNVS---DVRDIIEIAAKGNHSLALTIEGKVW 309
Query: 363 TWG 365
+G
Sbjct: 310 EFG 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+ +R PV S + + +A G H+L LT G V+ +FG
Sbjct: 261 WGSNGLSQLGDGTTTNRNTPVNVS--DVRDIIEIAAKGNHSLALTIEGKVW-----EFGS 313
Query: 103 LGIS----ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G + E + P+ ++ + +V+ I+ G H+ + DG L++WG N+ GQLG G
Sbjct: 314 IGATPTEKEVTLPAYRPVLVNEIT-DVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDG 372
Query: 159 KKAAKVIPI 167
+K P+
Sbjct: 373 TVGSKTKPV 381
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + +LG GS +R PV S + A+ GG +L L G + A G N Q
Sbjct: 211 WGSNNMEQLGDGSATNRCSPVHVSNLR--DIIAVNGGGDFSLALKSDGTIMAWGSNGLSQ 268
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ +S ++ ++++I+ +HS A+T++G+++ +G +G
Sbjct: 269 LGDGTTTNRN-TPVNVSDVR-DIIEIAAKGNHSLALTIEGKVWEFG-----SIG-ATPTE 320
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
K + +P L T A+ G +V + G + WG G+LG G S
Sbjct: 321 KEVTLPAYRPVLVNEITDVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDGTVGS 376
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ ++ G +HT L G L++WG NE G LG G+I HSP +V+ S +D
Sbjct: 39 APKIAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNKHSPVQVKHLSSIIVID--GGA 96
Query: 350 WKHTAAISEGKILTWGWGGS 369
W A S+G + W WGG+
Sbjct: 97 WHSIALKSDGTV--WAWGGN 114
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 24/350 (6%)
Query: 19 KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
+LG+ C + S + +WG GD GRLG+ + ++++P V ++ ++ +
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GG H + LTE G VY G FG LG L L K +V +S G HS+A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAV 202
Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
T GELY WG++ G+LG G + PTKV+ L GF ++A+T
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFF-TMALTK 261
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG + LGHG ++ + P+++ LE V + A G H+A +
Sbjct: 262 SGQLWSWGGNANHELGHGTRAN---------NWKPKVVAALEDVTLVQVACGGFHAAALT 312
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTW 312
++G+V +G ++ + + P+++ + + CG T +T G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372
Query: 313 GSNENGCLGI-GSIDVLHSPERVQGP---FSESPVDQ--VSCGWKHTAAI 356
G N + LGI G D P VQ P ++PV+ VSCG H I
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCI 422
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 158/348 (45%), Gaps = 39/348 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
WG G +G++G GS ++ PV+ S + + +A CG H++
Sbjct: 40 WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
E V+ G D G+LGI +P ++ K V S G H+ A+T G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
Y WG + G LG G +++P L G + + + G S AVT G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHSAAVTESGELYTW 211
Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G G GRLGHG + + P ++ L+ + GF + + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALDVPIASVYCGGFF-TMALTKSGQLW 266
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G A ++ + +P +++ L +V CGG+H LT G++ TWG NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LG G+++ P V+ ++ ++CG TAAI+E G + TWG
Sbjct: 327 QLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWG 373
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 51/275 (18%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
SS + E++ WG+ ++GQ+G G + + +P+ K+ +G+ Q + +
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+V VT G V WG G GRLG E ++Y P + ++ +
Sbjct: 88 NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVV-- 294
V++A+AG LH+ + E G VY +G A + G+ + L+ +L P+ + +V
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GHGSYERELLPRLLEGPWKDRIVHV 192
Query: 295 -CGGYHTCVLTSGGELYTWGSNE-NGCLGIGSIDV-----LHSPERVQGPFSESPVDQVS 347
GG H+ +T GELYTWG +E G LG G+ D+ L P +VQ + P+ V
Sbjct: 193 SAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA--LDVPIASVY 250
Query: 348 CGWKHTAAISEGKILTWGWGGS------HGTFSED 376
CG T A+++ L W WGG+ HGT + +
Sbjct: 251 CGGFFTMALTKSGQL-WSWGGNANHELGHGTRANN 284
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 197 KVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKI----AAAGF 247
+V +WG G G++GHG E + ++ L+ + I+ K ++ G
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
HS E V+++G ++ + +P + ++ + GG H LT G
Sbjct: 96 FHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTEVG 154
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
+YTWG G LG GS + P ++GP+ + V VS G H+AA++E G++ TWG
Sbjct: 155 NVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIV-HVSAGGSHSAAVTESGELYTWGR 213
Query: 367 GGSHGTFSEDGHSSGGQLDRGQLT 390
G GH + +D G L+
Sbjct: 214 DEGEGRL---GHGNPDIMDEGALS 234
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 159/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-MTIEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISPNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
++ S + PRLI++L + + G H + +G+ + +G + ++ F
Sbjct: 118 LMTIEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEF 175
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+R + +P ++ VV GG H+ L+ G ++ WG N G LG+ SP
Sbjct: 176 PSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 235 HVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 154/332 (46%), Gaps = 33/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ N RP L+ SE V+ CG YH VLTS E++TWG NG LG G
Sbjct: 329 GQL--GNPNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGD 386
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
++ P V+ + V ++CG TAAI
Sbjct: 387 VEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T + + GK+ T G
Sbjct: 296 LIDYDFYRVACGHSLTVGLTTSGKVWTMG 324
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G YG+LG G ++ P ++A+A G H+L LT++G VY+ G FG+
Sbjct: 52 FGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGLFGR 109
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N LEP +I GL ++ I+ G HS A+T G++Y +G NG GLG
Sbjct: 110 LG-HGNTDSQLEPKKIEGL-SDIQAIAAGDFHSLALTKSGDVYSFG---NGTSGLGHGNT 164
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P K+E LS + + A G S+A+T G V S+G G GRLGHG
Sbjct: 165 EDQSTPKKIESLSDV--QAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGD--------- 213
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ S+ P+ I++L ++ AAG HS + ++G VY FG ++ + + P
Sbjct: 214 TDSQLEPKKIEDLSDIQA--IAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPK 271
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
I L + V G H+ LT GE+Y++G G LG G D +P++++G
Sbjct: 272 KIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEG---LKD 328
Query: 343 VDQVSCGWKHTAAISE-GKILTWGWGGS 369
+ ++ G H+ A+++ G + ++G G S
Sbjct: 329 IQAIAAGDFHSLALTKSGDVYSFGNGTS 356
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 153/306 (50%), Gaps = 38/306 (12%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V++ G+ +G+LG + L P +I GL ++ I+ G +HS A+T G++Y +G
Sbjct: 48 SVFSFGMGMYGKLGHGDTAN-QLAPKKIEGLS-DIQAIAAGTNHSLALTKSGDVYSFGFG 105
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G +++ P K+E LS I + A G S+A+T G V S+G G SG LG
Sbjct: 106 LFGRLGHGNTDSQLEP--KKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG + + TP+ I+ L V+ AAG HS + ++G VY FG ++
Sbjct: 161 HG---------NTEDQSTPKKIESLSDVQA--IAAGGNHSLALTKSGDVYSFGFGLFGRL 209
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ + P I L + + GG H+ LT G++Y++G +G LG G + +
Sbjct: 210 GHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLT 269
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRG-- 387
P++++ S + V+ G H+ A+++ G++ ++G G + GQL G
Sbjct: 270 PKKIE---DLSDIQAVAAGANHSLALTKSGEVYSFGRGNT------------GQLGHGDT 314
Query: 388 --QLTP 391
QLTP
Sbjct: 315 DDQLTP 320
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 20/306 (6%)
Query: 92 VYATGLNDFGQLGI-SENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGK 149
VYA G +FGQLG+ +EN YS P + L + ++++ S A++ DG++Y WGK
Sbjct: 45 VYAWGYGNFGQLGLANENNQYS--PQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGK 102
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N G LG + + P VE L I KQ + G A++ G++ +WG G+L
Sbjct: 103 NKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKL 162
Query: 210 GH--GQESSILGFLRSTSEYT-------PRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
GH Q+S+ + R Y P ++ L G+K K + G + + ENG VY
Sbjct: 163 GHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVY 222
Query: 261 IFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
FG+ ++ +Q E +P I L + CG + ++S G++YTWG+N++G
Sbjct: 223 SFGNSMKGQLGYQSEETGNFQPKKIPDLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQ 282
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
LG P +V G F + + +SCG AA+S EGK+ TWG+G + GH
Sbjct: 283 LGNNQSIYQARPNQVTG-FGGNKIINISCGDNFIAALSNEGKLFTWGYGND----GQLGH 337
Query: 379 SSGGQL 384
S+ L
Sbjct: 338 SNRNDL 343
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 180/352 (51%), Gaps = 33/352 (9%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ T ++ WG G++G+LGL + +++ P ++ + + ++ L++ G
Sbjct: 36 FTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDG 95
Query: 91 CVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
VY G N G LG + +++ +P + L+ ++ QIS G H +AI+ DGELY WG
Sbjct: 96 KVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWG 155
Query: 149 KNSNGQLG--LGKKAAKV--------------IPIPTKVECLSGIFTKQAALGFEQSVAV 192
+G+LG + +K+ KV +PTKV+ L+GI KQ + G + +V +
Sbjct: 156 NKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVL 215
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V S+G G+LG+ E T + P+ I +L+ + + I G SA
Sbjct: 216 TENGEVYSFGNSMKGQLGYQSE--------ETGNFQPKKIPDLQNI-INI-DCGQQFSAA 265
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ +G+VY +G+ ++ + + RP+ ++ ++ + CG L++ G+L+
Sbjct: 266 VSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLF 325
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
TWG +G LG + + L++P++++ F E + +V CG HTA +++ L
Sbjct: 326 TWGYGNDGQLGHSNRNDLYAPKQIE--FKEKII-KVDCGGTHTAFLTQNNQL 374
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D+G+LG + RP + F + + ++CG L+ G ++ G + GQ
Sbjct: 275 WGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQ 334
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK-- 160
LG S N P +I K++++++ G H++ +T + +LY++G+ + GQLG+G+
Sbjct: 335 LGHS-NRNDLYAPKQIE-FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIE 392
Query: 161 -AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
A + P VE + G E ++A+T
Sbjct: 393 SEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAIT 426
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 132 bits (332), Expect = 3e-28, Method: Composition-based stats.
Identities = 105/323 (32%), Positives = 159/323 (49%), Gaps = 21/323 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P S+ ++ G +H+L LT+ G V+A GLN GQ
Sbjct: 94 WGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLALTDDGRVFAWGLNSSGQ 151
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ GL + + ++ G +HS A+T DG ++ WGKNS+GQLG
Sbjct: 152 LG-DGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNST 210
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
IP+ +V+ L T AA G S+A+T G++ +WG SG+LG G S
Sbjct: 211 VDSSIPV--QVQGLPANVTAVAA-GGNHSLALTSDGRIYAWGLNSSGQLGDGTTS----- 262
Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TP L+ L G K +AG HS + ++G VY +G + ++ +
Sbjct: 263 ----NSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASE 318
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P ++ L V GG + LTS G +Y WG N +G LG G+ ++P RV S
Sbjct: 319 MPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLS 378
Query: 340 ESPV---DQVSCGWKHTAAISEG 359
+ Q+S G + A+S G
Sbjct: 379 TGALLTDLQLSDGSSNPIALSPG 401
Score = 121 bits (304), Expect = 5e-25, Method: Composition-based stats.
Identities = 102/302 (33%), Positives = 147/302 (48%), Gaps = 26/302 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A++ GG+H+L LT V+A G N GQLG G P GL V Q+S G H
Sbjct: 74 AVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQ-TPTPAQGL-PSVAQVSAGESH 131
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVT 193
S A+T DG ++ WG NS+GQLG G A P+ +V+ L+ T K A G S+A+T
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPV--QVQGLATDSTIKVVAAGGNHSLALT 189
Query: 194 GGGKVLSWGAGGSGRLGHGQ--ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G+V +WG SG+LG+ +SSI P ++ L V AAG HS
Sbjct: 190 SDGRVFAWGKNSSGQLGNNSTVDSSI-----------PVQVQGLPA-NVTAVAAGGNHSL 237
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
+ +GR+Y +G + ++ +++ P L++ LP + V G H+ L G
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT 297
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+Y WG N G LG G+ P +V G + V VS G + A+ S+G + WG
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPVQVTG---LANVTAVSAGGSDSLALTSDGYVYAWGLN 354
Query: 368 GS 369
S
Sbjct: 355 SS 356
Score = 110 bits (274), Expect = 2e-21, Method: Composition-based stats.
Identities = 86/269 (31%), Positives = 126/269 (46%), Gaps = 28/269 (10%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G HS +T D ++ WG N+NGQLG G + P P + L + Q + G
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPA--QGLPSV--AQVSAGES 130
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAG 246
S+A+T G+V +WG SG+LG G + TP ++ L +K+ AAG
Sbjct: 131 HSLALTDDGRVFAWGLNSSGQLGDGT---------TADSRTPVQVQGLATDSTIKVVAAG 181
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
HS + +GRV+ +G + ++ + P + LP + V GG H+ LTS
Sbjct: 182 GNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLALTS 241
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESPVDQVSCGWKHTAAISEGKILTW 364
G +Y WG N +G LG G+ +P V G P PV VS G H+ A+ + + +
Sbjct: 242 DGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPV-AVSAGKDHSLALMQDGTV-Y 299
Query: 365 GWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
WGG +S GQL G T SE
Sbjct: 300 AWGG----------NSYGQLGNGTTTASE 318
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 160/337 (47%), Gaps = 30/337 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 285 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 344
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 345 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 403
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G + AV T GK+ +WG G RL
Sbjct: 404 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 461
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L A G + + +G ++ G +V
Sbjct: 462 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 511
Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L N R P L+ + EV CG YH VLT GE+YTWG NG LG G I
Sbjct: 512 QLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIA 571
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
+P V+ + V +++CG TAAI + K ++
Sbjct: 572 DRKTPTFVEA-LRDRSVKRIACGSGFTAAICQHKSVS 607
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 35/253 (13%)
Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG + + AA I +P +E + A G + + VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +SI + PRL++ L V+ A G H+ I
Sbjct: 278 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 328
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S P V CG +HT ++TS G
Sbjct: 329 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 387
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+LYT+G G LG G+ + + P+ V+ + VSCG HTAA+ E
Sbjct: 388 KLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIMAQSNTS 446
Query: 359 -GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 447 SGKLFTWGDGDKY 459
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +S+ +T P+ ++ + V A G H+A + V+ +G+ ++
Sbjct: 234 QGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 293
Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
G +P L+ L E + CG +HTC +T+ G+LYTWG ++ G LG GS +
Sbjct: 294 GHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGS-N 352
Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
V H P+RV GP V VSCG HTA I S GK+ T+G GTF GH
Sbjct: 353 VSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFG----DGTFGVLGH 402
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 20/314 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G N GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
HT VLT G ++T+G+ G LG S++ +P RV S V Q++CG +HT A
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309
Query: 357 --SEGKILTWGWGG 368
S G I +G G
Sbjct: 310 VPSSGLIYAFGCGA 323
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 130/280 (46%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
HT S G +Y +G G LG G + P V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 28/287 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISPNLQGVVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
F +R + +P ++ VV GG H+ L+ G ++ WG N G LG+ S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
P V+ ++ V +SCG +HTA +++ G + T+G GS G D
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFG-AGSCGQLGHD 277
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 45/338 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 370 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 429
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G +
Sbjct: 430 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 488
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G R
Sbjct: 489 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 546
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 547 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 593
Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG NG
Sbjct: 594 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
LG G D +SP V+ + V ++CG TAA+
Sbjct: 650 RLGHGDADDRNSPTLVES-LKDKQVKSIACGSNFTAAV 686
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+LG + N+
Sbjct: 327 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 386
Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + + +P
Sbjct: 387 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 443
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+ GI A G + VT G++ ++G G G LGHG S+ +
Sbjct: 444 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 493
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
PR + L+G++ AA G H+A + E +G+++ +GD DK G+
Sbjct: 494 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSRLGHGD 551
Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ P+ ++ L P +V CG T LT+ G +YT GS G LG D P
Sbjct: 552 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPT 610
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
RV G +S V++++CG H A + S ++ TWG G +
Sbjct: 611 RVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSN 648
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 38/252 (15%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 303 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 362
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 363 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 413
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHA-----RRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+G +Y +G D + GN +R + + + + + CG YHT V+TS G+
Sbjct: 414 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 471
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
L+T+G G LG G + P V V + +CG HTAA+ E
Sbjct: 472 LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSN 530
Query: 359 ---GKILTWGWG 367
GK+ TWG G
Sbjct: 531 CSSGKLFTWGDG 542
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+ + + G + +G+ + ++ ++ + P LI L
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
+ E V CG YH+C +T G+LYTWG + G LG G+ +V H P+RV V
Sbjct: 397 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 455
Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
++CG HTA + S G++ T+G GTF GH
Sbjct: 456 IACGPYHTAVVTSAGQLFTFG----DGTFGVLGH 485
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 162/336 (48%), Gaps = 31/336 (9%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G+ E S + P C F+ LK +ACG H+LFL G VY G N G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 102 QLGIS------ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG E +G +L+ +ISG +S G HS A+ G+++ WG GQL
Sbjct: 65 QLGHDKGGSRPELVG-ALDAQKISG-------VSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
GLG A + + +P ++ L Q G +A++ G++ WG SG+LG G+ E
Sbjct: 117 GLGT-AEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGE 175
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S L +P+ +K L G+ + +AG HS + +G V+ +G + ++ +
Sbjct: 176 PSTL---------SPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND 226
Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
P I K S++VV CG HT LT G L+T+G+ G LG S P
Sbjct: 227 EQDRAVPCHI-KFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLP 285
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
RV + V Q++CG HT A L + +G
Sbjct: 286 RRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIYAFG 320
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 27/285 (9%)
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLGI + EP + + +++ G HS + DG +Y G NS GQLG K
Sbjct: 11 GQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDK 70
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P V L + G S+AV G+V +WGAG G+LG G +
Sbjct: 71 GGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAV- 125
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PRLIK+L ++ G H + ++G+++++G+ + ++ +G
Sbjct: 126 -------RVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKG---- 174
Query: 280 RPSLISKLPYSE-------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
PS +S P ++ GG H+ L+ G ++ WG N G LG+ P
Sbjct: 175 EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPC 234
Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
++ S+ V +SCG +HTAA++ EG + T+G GS G D
Sbjct: 235 HIKFLRSQKVV-YISCGEEHTAALTKEGGLFTFG-NGSKGQLGHD 277
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 42 LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG G+LGLG E S P + L ++ GG H+ L+ +G V+ G N
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ ++ P I L+ ++VV IS G H++A+T +G L+ +G S GQ LG
Sbjct: 220 GQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ--LGH 276
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+ + P+P +V L G Q A G ++A V G + ++G G+LG G
Sbjct: 277 DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG+ G+G+LG G + S + PR +G +K A G HS + +G
Sbjct: 2 MLCWGSSGAGQLGIGASEA--------SVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ +G RP L+ L + V CG H+ + G+++ WG+
Sbjct: 54 SVYTCGSNSCGQLGHDKG--GSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAG 111
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 374
+ G LG+G+ + R+ E + QV CG H A+S +G++ W
Sbjct: 112 DGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVW---------- 161
Query: 375 EDGHSSGGQLDRGQLTPS 392
G +S GQL G+ PS
Sbjct: 162 --GENSSGQLGLGKGEPS 177
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG L P R+ L EV QI+ G +H+ A + G +Y +G N+ GQLG G +
Sbjct: 274 LGHDSTRNEPL-PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332
Query: 161 AAKVIPIPT---KVECLSGIFTK 180
+ P+P + C+ +T+
Sbjct: 333 GSAKSPVPVSNIQPLCIGNAYTR 355
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 152/326 (46%), Gaps = 16/326 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P + ++ CG +++ + VY+ G DFG
Sbjct: 34 WGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFG 93
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ P + L + V ++ G H+ T +G+L+ +G+N NGQ GLG
Sbjct: 94 RLGTG-DVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLG-- 150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P V L G A G E S+ VT G+V WG G G +G G+
Sbjct: 151 SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGE------- 203
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S + P L K LEGVKV G+ HS +DE G +Y +G A +++ +
Sbjct: 204 --SQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYV 261
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + + V G HT S G L+ G N+ G G+G + + ++V+ E
Sbjct: 262 PKRVEAVQQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGE 321
Query: 341 SPVDQVSCGWKHTAAISE-GKILTWG 365
V QV GWKHT A++ GK +WG
Sbjct: 322 RVV-QVKSGWKHTMAVTHTGKFFSWG 346
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 138/292 (47%), Gaps = 17/292 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G ++ + P A + ++ACG HTL T G ++A G N GQ
Sbjct: 87 WGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQ 146
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ +I LEP ++ L+ KEVV ++ G HS +T +GE+Y WG G +G G+
Sbjct: 147 CGLG-SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQ 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +PT + L G+ Q G+ S+AV GG + +WG G +L G
Sbjct: 206 DR--HLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKD----- 258
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P+ ++ ++ +V A G+ H+ D GR++ G + R
Sbjct: 259 ----HYVPKRVEAVQ--QVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRV 312
Query: 282 SLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ L +V G HT +T G+ ++WG N NG LG + +SP
Sbjct: 313 QQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSP 364
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 115/253 (45%), Gaps = 19/253 (7%)
Query: 122 KKEVVQISTGYHHSSAI--TVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ EV+ ++ G HS A+ T G + + WG+ +GQLG G A+ P V L
Sbjct: 6 EPEVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGD--AEDRQEPQAVFSLLHRG 63
Query: 179 TKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
G E S+AV GG K V SWG G GRLG G + + P + L G
Sbjct: 64 ATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDV---------FIPCPLPALAG 114
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVC 295
+V A G H+ G+++ FG + P L++ L E V C
Sbjct: 115 RRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVAC 174
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H+ +TS GE+Y WG G +G G H P +G V QV+CGW+H+ A
Sbjct: 175 GAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKG-LEGVKVAQVNCGWRHSIA 233
Query: 356 ISEG-KILTWGWG 367
+ EG + TWGWG
Sbjct: 234 VDEGGAMYTWGWG 246
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 21/298 (7%)
Query: 76 LACGGAHTLFLTET---GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
LACG +H+L L T V + G + GQLG + S L + + G
Sbjct: 12 LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGA 71
Query: 133 HHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+S A+ D ++Y WG G+LG G K + IP + L+G A G ++
Sbjct: 72 EYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKDVFIPCPLPALAGRRVASVACGDTHTLV 129
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G++ ++G +G+ G LG ++ E P+L+ L+G +V A G HS
Sbjct: 130 ATAEGQLFAFGRNQNGQCG-------LGSIQDCLE--PQLVTALQGKEVVAVACGAEHSM 180
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
C+ G VY +G + E P+L L +V CG H+ + GG +
Sbjct: 181 CVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
YTWG L G + P+RV+ + V V+ GW+HT AA S+G++ GW
Sbjct: 241 YTWGWGAYAQLMQGDRKDHYVPKRVE---AVQQVATVAGGWRHTMAADSQGRLFASGW 295
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 45/338 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 336 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 395
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G +
Sbjct: 396 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 454
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G R
Sbjct: 455 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 512
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 513 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 559
Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG NG
Sbjct: 560 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
LG G D +SP V+ + V ++CG TAA+
Sbjct: 616 RLGHGDADDRNSPTLVES-LKDKQVKSIACGSNFTAAV 652
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 162/338 (47%), Gaps = 39/338 (11%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+LG + N+
Sbjct: 293 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 352
Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + + +P
Sbjct: 353 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 409
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+ GI A G + VT G++ ++G G G LGHG S+ +
Sbjct: 410 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 459
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
PR + L+G++ AA G H+A + E +G+++ +GD DK G+
Sbjct: 460 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSRLGHGD 517
Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ P+ ++ L P +V CG T LT+ G +YT GS G LG D P
Sbjct: 518 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPT 576
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
RV G +S V++++CG H A + S ++ TWG G +
Sbjct: 577 RVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSN 614
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 38/252 (15%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 269 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 328
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 329 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 379
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHA-----RRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+G +Y +G D + GN +R + + + + + CG YHT V+TS G+
Sbjct: 380 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 437
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
L+T+G G LG G + P V V + +CG HTAA+ E
Sbjct: 438 LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSN 496
Query: 359 ---GKILTWGWG 367
GK+ TWG G
Sbjct: 497 CSSGKLFTWGDG 508
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+ + + G + +G+ + ++ ++ + P LI L
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
+ E V CG YH+C +T G+LYTWG + G LG G+ +V H P+RV V
Sbjct: 363 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 421
Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
++CG HTA + S G++ T+G GTF GH
Sbjct: 422 IACGPYHTAVVTSAGQLFTFG----DGTFGVLGH 451
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 20/319 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
E P C F +++ + CG HT+F+ + G VY G ND GQLG ++ +P
Sbjct: 4 EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS---RKKPD 60
Query: 117 RISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
++ L + +V +S G H+ A+ G+++ WG ++GQ+GL A I +P ++ L
Sbjct: 61 QVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLS-VAEDYIRVPRNIKSLY 119
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
I Q A G S+A++ + SWG G+LG G E E PR IK L
Sbjct: 120 DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK--------KESAPRHIKSL 171
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
G+ AAG HS + +G ++ +G ++ + P+L+ L S++++
Sbjct: 172 AGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSL-RSQKIIH 230
Query: 295 --CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
CG HT LT G ++T+G+ G LG S + +P +V S V Q++CG +H
Sbjct: 231 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-FELMGSIVTQIACGRQH 289
Query: 353 TAAI--SEGKILTWGWGGS 369
T A S G+I ++G GG+
Sbjct: 290 TLAFVPSSGRIYSFGLGGN 308
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G V++ G GQ+
Sbjct: 43 GCNDLGQLGHD--KSRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 100
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + ++Y WG+N GQLGLG +
Sbjct: 101 GLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK 160
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L+GI A G S A+T G + WG G+LG E
Sbjct: 161 KE-SAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDE-------- 211
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 212 -TDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 270
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L S ++ CG HT S G +Y++G NG LG GS SP V+G
Sbjct: 271 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 327
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFG 204
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 205 QLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 264
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 265 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSN 318
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 156/334 (46%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKM--LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L +G RP L+ SE V+ CG YH VLTS E++TWG NG LG
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G I+ P V+ + V ++CG TAAI
Sbjct: 385 GDIEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 126/283 (44%), Gaps = 32/283 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSEDG 377
+ +V+CG T + + GK+ T G G G + DG
Sbjct: 296 LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDG 338
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 154/332 (46%), Gaps = 33/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARLN---------PTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ N RP L+ +E +V CG YH VLTS E++TWG NG LG G
Sbjct: 329 GQL--GNPNSDGRPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGD 386
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ P V+ + V ++CG TAAI
Sbjct: 387 IEDQKVPTLVEA-LKDRSVRHIACGANFTAAI 417
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG++V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + +P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T + + GK+ T G
Sbjct: 296 LIDYDFYRVACGHSLTVGLTTSGKVWTMG 324
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 45/338 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 331 WGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 390
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G +
Sbjct: 391 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 449
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G R
Sbjct: 450 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 507
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 508 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 554
Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG NG
Sbjct: 555 PVYGQLGN----PHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
LG G D +SP V+ + V ++CG TAA+
Sbjct: 611 RLGHGDADDRNSPTLVES-LKDKQVKSIACGSNFTAAV 647
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 166/343 (48%), Gaps = 40/343 (11%)
Query: 50 RLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG-- 104
R+G SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+LG
Sbjct: 284 RVG-SSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHG 342
Query: 105 ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ N+ + P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + +
Sbjct: 343 VDSNVQH---PKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSH 399
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P + GI A G + VT G++ ++G G G LGHG S+
Sbjct: 400 WVPKRVNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------ 452
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKML 271
+ PR + L+G++ AA G H+A + E +G+++ +GD DK
Sbjct: 453 ---FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSR 507
Query: 272 FQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
G+ + P+ ++ L P +V CG T LT+ G +YT GS G LG D
Sbjct: 508 LGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG 567
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
P RV+G +S V++++CG H A + S ++ TWG G +
Sbjct: 568 -KVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSN 609
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 38/252 (15%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 264 GDVFMWGEGIGEGVLGGGNYRVGSSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVT 323
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 324 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALSTTNIELVACGEYHSCAV 374
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHA-----RRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+G +Y +G D + GN +R + + + + + CG YHT V+TS G+
Sbjct: 375 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 432
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
L+T+G G LG G + P V V + +CG HTAA+ E
Sbjct: 433 LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSN 491
Query: 359 ---GKILTWGWG 367
GK+ TWG G
Sbjct: 492 CSSGKLFTWGDG 503
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+ + + G + +G+ + ++ ++ + P LI L
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
+ E V CG YH+C +T G+LYTWG + G LG G+ +V H P+RV V
Sbjct: 358 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 416
Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
++CG HTA + S G++ T+G GTF GH
Sbjct: 417 IACGPYHTAVVTSAGQLFTFG----DGTFGVLGH 446
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 160/321 (49%), Gaps = 19/321 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G ++ P + + + + CG HT ++ G ++ G +G+
Sbjct: 31 WGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGK 90
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG G+S P R+ L VV I+ G H++ +T G LY WG NG G G
Sbjct: 91 LGHGNESGHS-TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTE 149
Query: 162 AKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P +E LSG Q +A GF +T G+V +WG G GRLGHG E +
Sbjct: 150 GHQY-TPKLLERLSGKRVVQLSACGFHTG-CLTDAGEVYTWGEGKFGRLGHGAERNC--- 204
Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++PRL++ L G + V+I+ GF HSA + +G++Y FG ++ + +
Sbjct: 205 ------HSPRLVETLLGKRPVQISCGGF-HSAVVTADGKMYTFGGGEHGQLGHGDKVNKV 257
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+P+L+ L + ++ CG H+ LTS E+YTWG+ ++G LG G + +P+ V+
Sbjct: 258 KPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKL 317
Query: 338 FSESPVDQVSCGWKHTAAISE 358
+ V S +HTA + E
Sbjct: 318 VGQKVVCVASYN-EHTACLVE 337
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 28/312 (8%)
Query: 87 TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELY 145
T G VY G D G+LG +N G+ P L +V+ ++ G +H++A++ G L+
Sbjct: 23 THGGGVYTWGRGDDGRLGHGDN-GWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLF 81
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG G+LG G ++ P +V+ L G+ A G + VT G + +WG
Sbjct: 82 TWGGGMYGKLGHGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGD 264
+G GHG +YTP+L++ L G +V +++A GF H+ C+ + G VY +G+
Sbjct: 140 NGVAGHGDTEG--------HQYTPKLLERLSGKRVVQLSACGF-HTGCLTDAGEVYTWGE 190
Query: 265 RAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + P L+ L ++ CGG+H+ V+T+ G++YT+G E+G LG
Sbjct: 191 GKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH 250
Query: 323 GSIDVLHSPERVQ---GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
G P V+ G F + Q++CGW H+ A+ S ++ TWG G HG GH
Sbjct: 251 GDKVNKVKPTLVKDLDGVF----LTQITCGWSHSVALTSSHEVYTWG-NGDHGKL---GH 302
Query: 379 SSGGQLDRGQLT 390
G ++ QL
Sbjct: 303 GCGKKVSTPQLV 314
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 156/334 (46%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKM--LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L +G RP L+ SE V+ CG YH VLTS E++TWG NG LG
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G I+ P V+ + V ++CG TAAI
Sbjct: 385 GDIEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 126/283 (44%), Gaps = 32/283 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSEDG 377
+ +V+CG T + + GK+ T G G G + DG
Sbjct: 296 LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDG 338
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 147/323 (45%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG G ++S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3952 GYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG I Y L + L E+V I+ G HHS+AI+ G LY WGK G+LG G
Sbjct: 4012 KLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSD 4071
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ PT V L G A G Q++ VT V SWG G G+LG G
Sbjct: 4072 DQL--KPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4123
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G VY +G ++ +H R
Sbjct: 4124 ---SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4180
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP +S L + + G H + GE+YTWG N+ G LG G+ SP V
Sbjct: 4181 RPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHA- 4239
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4240 LQGKNITRVACGSAHTLAWSTTK 4262
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 150/319 (47%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2980 GEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3039
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3040 KLGHGNRVSLD-KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3098
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3099 TTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG----- 3151
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S Y+P + L G+ V G S + + G V+ +G ++ +H
Sbjct: 3152 ----SDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3207
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
RRP+L+ L + V G H +T G++Y WG N++G G GS V P V
Sbjct: 3208 RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHN 3267
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++V+CG H+ A
Sbjct: 3268 -LEDAKVNRVACGSSHSIA 3285
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 44/330 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + A + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3033 WGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3092
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + + L+P + L + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3093 LGHGDTTTH-LKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG 3151
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+P V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3152 SDGCYSPLP--VDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3207
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3208 -------RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGST 3256
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
R+PSL+ L ++ V CG H+ W + LG + E
Sbjct: 3257 MVNRKPSLVHNLEDAKVNRVACGSSHS---------IAWVLTDQPTLG--------NQEP 3299
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILT 363
V P ++ P+ Q + G+ T +E ++T
Sbjct: 3300 VTFPTAKDPLGQATLGF--TQDKTETNVVT 3327
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 86 LTETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ + VY GLND QLG + + L+P+ I+G K + +S
Sbjct: 2918 VQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQ----- 2972
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT 193
+G+LY G+ +NG+LGLG P P + LS K+ A+ G + ++A+T
Sbjct: 2973 -----EGKLYACGEGTNGRLGLGDNNNVGEPKP--IPFLSQYIIKKVAVHSGGKHALALT 3025
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GKV SWG G G+LGHG S+ PRLI+ L+ +++ A G HSA I
Sbjct: 3026 QDGKVFSWGEGEDGKLGHGNRVSL---------DKPRLIEALKSKRIRDIACGSGHSAAI 3076
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGEL 309
NG +Y +G ++ + +P L+ L +V CG T LT G +
Sbjct: 3077 ASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSV 3136
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
Y+WG + G LG G D +SP +R+ G V QV CG + + A+++ G++ TWG
Sbjct: 3137 YSWGDGDFGKLGRGGSDGCYSPLPVDRLNG----LGVVQVECGAQFSLALTKYGEVWTWG 3192
Query: 366 WGGSHGTFSEDGHSSGGQLDRGQLT 390
G + GH + + R L
Sbjct: 3193 ----KGDYFRLGHGNDHHVRRPTLV 3213
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 152/342 (44%), Gaps = 40/342 (11%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ T Q A WGN +G GS+ P C A + +K L C L L+ +G
Sbjct: 429 TQTFQEVLA--WGNVHFGS---GSM-----PFYCDAIAEIGVKQLCCTERALLILSLSGK 478
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGK 149
VY Q P + G +VVQI++ H A+T G +Y WG
Sbjct: 479 VYMMYYGSETQY-----------PQSVYGFADDVVQIASHPDGKHYLALTTKGIVYSWGN 527
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G + P +E LS A G S A++ G++L+WG G GRL
Sbjct: 528 GDGGRLGHGDSFS--CDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRL 585
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAV 267
GHG I P ++ L G V A +G + C+ +G V+ +GD
Sbjct: 586 GHGICDDI---------SIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDY 636
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
K+ + ++ P ++ KL +V CGG + LT+ GE+YTWG ++ LG G+
Sbjct: 637 GKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNE 696
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+ + P+ V+G V +S G H AI+E + L +GWG
Sbjct: 697 EHVRFPKLVEG-LRNKKVRDLSVGNLHILAITEDQ-LVYGWG 736
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P+ C + LA GG TLF +T G VYATG G
Sbjct: 3899 WGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLA-GGEQTLFAVTADGKVYATGYGALG 3957
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3958 RLGTGGVDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G A G S A++ G + +WG G GRLGHG
Sbjct: 4016 GNRIT--YDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD---- 4069
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P ++ L+G KV A +G + C+ ++ V+ +GD K+
Sbjct: 4070 -----SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4124
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ D + P +
Sbjct: 4125 DGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4184
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V + ++ G H A S+ G++ TWG
Sbjct: 4185 VSA-LQGKKIVSIATGSLHCVACSDKGEVYTWG 4216
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + RP + A + +ACGG H+ ++ G +Y G +G+
Sbjct: 4005 WGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGR 4064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P ++ L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4065 LGHGDS-DDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4123 -GSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-NHA 278
PR + L+G K+ A G LH + G VY +GD D+ +G HA
Sbjct: 4180 -------RRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDN--DEGQLGDGTTHA 4230
Query: 279 RR-PSLISKL--PYSEEVVCGGYHT 300
++ P L+ L V CG HT
Sbjct: 4231 QQSPRLVHALQGKNITRVACGSAHT 4255
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
EVVQ +S + + +Y+WG N QLG G K +K I +P E LS + A
Sbjct: 2904 EVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG-GLKGSK-IKLPVHSEVLSKLKPIHIA 2961
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + V+ GK+ + G G +GRLG G +++ P+ I L +K
Sbjct: 2962 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNV---------GEPKPIPFLSQYIIKKV 3012
Query: 244 A--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
A +G H+ + ++G+V+ +G+ K+ +P LI L ++ CG H
Sbjct: 3013 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGH 3072
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAIS 357
+ + S GELYTWG E G LG G P+ V + V QV+CG + T A++
Sbjct: 3073 SAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQR-VIQVACGSRDAQTMALT 3131
Query: 358 E-GKILTWGWG--GSHGTFSEDGHSSGGQLDR 386
E G + +WG G G G DG S +DR
Sbjct: 3132 EDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDR 3163
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 110/244 (45%), Gaps = 21/244 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
G H L LT G VY+ G D G+LG ++ EP I L + V I+ G +S+AI
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD-EPQVIEVLSDRTVTYIACGSTYSAAI 568
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
+ GEL WG+ S G+LG G I IPT V L+G A G Q++ VT G
Sbjct: 569 SSTGELLTWGRGSYGRLGHG--ICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSG 626
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G S P+++ +L V G SA + +
Sbjct: 627 IVFSWGDGDYGKLGRGG---------SDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677
Query: 257 GRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
G VY +G D GN H R P L+ L + ++ G H +T +Y W
Sbjct: 678 GEVYTWGKG--DHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGW 735
Query: 313 GSNE 316
G N+
Sbjct: 736 GRND 739
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 115/244 (47%), Gaps = 22/244 (9%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G +Y WG N GQLG G + AKV +P+P E LS + Q A G + AVT GKV +
Sbjct: 3894 GAIYGWGHNHRGQLG-GLEGAKVKLPLP--CESLSALRPIQLAGGEQTLFAVTADGKVYA 3950
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S++ P L++ ++ V +K A +G H + G
Sbjct: 3951 TGYGALGRLGTGGVDSVM---------VPTLLESIQHVFIKKVAVNSGGKHCLALSSEGH 4001
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G+ K+ RP LI L +E ++ CGG+H+ ++S G LYTWG
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGR 4061
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G D P V +D V+CG T +++ + W WG G +G
Sbjct: 4062 YGRLGHGDSDDQLKPTVVTALQGYKVID-VACGSGDAQTLCVTDDDNV-WSWGDGDYGKL 4119
Query: 374 SEDG 377
G
Sbjct: 4120 GRGG 4123
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + ++ + CGG + LT G VY G D +
Sbjct: 631 WGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ + P + GL+ K+V +S G H AIT D +Y WG+N Q+
Sbjct: 691 LGHGNEEHVRF---PKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSL 747
Query: 160 KAAKVIPIPTKVECLSG 176
A V+ PT LSG
Sbjct: 748 GA--VVSEPTLCPTLSG 762
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG G E + + P + L ++ A G +
Sbjct: 3892 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PLPCESLSALRPIQLAGGEQTLFAV 3942
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+VY G A+ ++ + P+L+ + + V GG H L+S G +
Sbjct: 3943 TADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4002
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
Y+WG ++G LG G+ P+ ++ VD ++CG H+AAIS G + TWG G
Sbjct: 4003 YSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVD-IACGGHHSAAISSAGWLYTWGKG 4060
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C S L R A WG GDY RLG G+ + RP SA + + ++A G H +
Sbjct: 4146 CGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVA 4205
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
++ G VY G ND GQLG P + L+ K + +++ G H+ A
Sbjct: 4206 CSDKGEVYTWGDNDEGQLGDGTTHAQQ-SPRLVHALQGKNITRVACGSAHTLA 4257
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG+ D G+LG G+ ++ P + A + ++ +ACG AHTL + T ++
Sbjct: 4215 WGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHS 4266
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 150/297 (50%), Gaps = 22/297 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + S+ + + LA HTL +TE+G V++ G D+
Sbjct: 1856 GEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDY 1915
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1916 GKLGHG-NSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGT 1974
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
K +PT+V L A G ++ V+ G V ++G G G+LG G
Sbjct: 1975 TTNK--KVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGN----- 2027
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ ++ P IK L+G +K A G S + + G+V+ +G + G
Sbjct: 2028 ----TVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSN 2083
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+P ++ L + E+VVCG HT VLTS G+++ WGSN G LG+G + SP R
Sbjct: 2084 CQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTN---SPVR 2137
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + L+CG H+ +T G ++ G D+G+
Sbjct: 1910 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG+ + P R+ L+ + ++ G +H+ ++ DG ++ +G G+LG G
Sbjct: 1970 LGLGTTTNKKV-PTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNT 2028
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K +PTK++ L G K+ A G + SVA++ GKV +W G RL GQ +
Sbjct: 2029 VGK--HLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTW---GQERL-IGQPDT---- 2078
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR 279
R S P+ + L G ++ G H+ + +G V+ +G + ++ L + R
Sbjct: 2079 -RGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVR 2137
Query: 280 RPSLISKL 287
P L+ L
Sbjct: 2138 EPQLVPCL 2145
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 19/246 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA--L 184
QI G + + + +G + G+ S G+LG G + + T + + G Q A +
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGN--SDDLHSLTAISSIQGFVVTQLATSV 1892
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + ++AVT G+V SWG G G+LGHG S + PR I+ L+G +V
Sbjct: 1893 GSDGHTLAVTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVIQL 1943
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT- 300
+ GF HSA + +G+++ FG+ ++ + + P+ + L + V CG HT
Sbjct: 1944 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTL 2003
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
CV G ++ +G + G LG G+ H P +++ + +V+CG + + A+S+ G
Sbjct: 2004 CVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKA-LQGHVIKKVACGTQFSVALSKYG 2062
Query: 360 KILTWG 365
K+ TWG
Sbjct: 2063 KVFTWG 2068
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E ++WG NGQ+ G + A V P +V S ++Q G + V G VL+ G
Sbjct: 1802 EAFLWGSGRNGQMCEGGRGAFV---PVRVPSFS--CSQQIVCGQNCTFVVQNNGTVLACG 1856
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLG G S L L + S ++ +L + + G H+ + E+G V+ +
Sbjct: 1857 EGSYGRLGQGN-SDDLHSLTAISSIQGFVVTQL---ATSVGSDG--HTLAVTESGEVFSW 1910
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
GD K+ + RRP I L EEV+ CG H+ V+T+ G+L+T+G+ + G
Sbjct: 1911 GDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
LG+G+ P RV + V+CG HT +S W +G
Sbjct: 1970 LGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHTLCVSADGTNVWAFG 2016
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 156/334 (46%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKM--LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L +G RP L+ SE V+ CG YH VLTS E++TWG NG LG
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G I+ P V+ + V ++CG TAAI
Sbjct: 385 GDIEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 126/283 (44%), Gaps = 32/283 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSEDG 377
+ +V+CG T + + GK+ T G G G + DG
Sbjct: 296 LIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDG 338
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 164/378 (43%), Gaps = 72/378 (19%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P E + +A G H+L L + G V+A G N +G
Sbjct: 133 WGYNSYGQLGLGEAGEIERIPKKIEGLE--DVIKVAAGSRHSLALKKDGTVWAWGYNYYG 190
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG NI + P+++ GL V I G S A+ DG ++ WG N GQ+G G
Sbjct: 191 QLGDESNIRRN-TPVQVKGLTG-VKDIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGI 248
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+ T +S I Q + G E +A+ V WGAG G+LG+G +S L
Sbjct: 249 NSNVPLQTV--GVSNI--TQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIP 304
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD---------RAVDKMLF 272
S +T +VK AG + SA I E+G ++I+GD R ++
Sbjct: 305 EKLSSFT----------EVKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMGNSRNINSSPV 354
Query: 273 QEGN----------------------------------------HARRPSLISKLPYSEE 292
Q + ++ PS++S E
Sbjct: 355 QRKDISGIKAVELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSGTGDVEV 414
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ CG H ++ S G L+TWG N G LG G++D + P + G S + ++SCG KH
Sbjct: 415 ISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTINGI---SNISKISCGGKH 471
Query: 353 TAAISEGKILTWGWGGSH 370
AI E K L W WG +
Sbjct: 472 VLAIDENKTL-WAWGNND 488
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 19/243 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ++ G +H+ A+ DG ++ WG NS GQLGLG +A ++ IP K+E L + + A G
Sbjct: 112 VQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG-EAGEIERIPKKIEGLEDVI--KVAAG 168
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S+A+ G V +WG G+L G ES+I TP +K L GVK I A
Sbjct: 169 SRHSLALKKDGTVWAWGYNYYGQL--GDESNI-------RRNTPVQVKGLTGVK-DIDAG 218
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
F S + ++G V+ +G ++ G ++ P + ++ G H L
Sbjct: 219 DFF-SVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGDEHVLALDK 277
Query: 306 GGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
++ WG+ + G LG G+ L PE++ F+E V V G +AAI E L W
Sbjct: 278 DKNVWGWGAGDKGQLGNGTAASFLRIPEKLS-SFTE--VKSVKAGTMVSAAIKEDGTL-W 333
Query: 365 GWG 367
WG
Sbjct: 334 IWG 336
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 141/331 (42%), Gaps = 27/331 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+++ PV + ++ ++CGG H L + E ++A G ND+ Q
Sbjct: 434 WGYNIYGQLGNGNVDYITEPVTINGIS--NISKISCGGKHVLAIDENKTLWAWGNNDYLQ 491
Query: 103 LGISENIGYSLE--------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L +++G S E P + +K+V I ++ + + D E++++ N
Sbjct: 492 L--IDDVGLSAESGSNDYCIPFAVKS-EKDVKDIVAAFNRTLVVYEDEEVWIYAA-KNTV 547
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G + + +P K+E L G+ ++G +A+ G V S G G+LG G +
Sbjct: 548 AG----DEQSVYLPYKIEGLEGV--TDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQ 601
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S SE T L K + AAG HS + +G V+ +G ++
Sbjct: 602 T----HHNSYSE-TFNLTKAKGLTNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGN 656
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ P L + G + L G ++ WG N G LG GS + P +V
Sbjct: 657 DTFSLEPMQAEGLENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVPVQV 716
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
G E+ V ++ A +G + WG
Sbjct: 717 DGL--ENIVKIIAGRDSSFAITKDGDVWAWG 745
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 17/191 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G L G+ P+ E ++ A++ G + L L E G V+A G N +GQ
Sbjct: 644 WGSNQFGELAHGNDTFSLEPMQAEGLE--NICAISAGNNYNLALKEDGTVWAWGDNTYGQ 701
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ GL+ +V+I G S AIT DG+++ WGKN+ GQLG G
Sbjct: 702 LGNGSTYKTNV-PVQVDGLEN-IVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQN 759
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ K++ G K G + ++ + G V+ G+ SG + LGF
Sbjct: 760 RLTPV--KIDAFKG--CKSIVSGMDFTMVLMNDGTVIGVGSNVSGVM-------TLGF-- 806
Query: 223 STSEYTPRLIK 233
S + P +K
Sbjct: 807 SDRSFIPIEVK 817
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS PV E ++ + G + +T+ G V+A G N+ GQ
Sbjct: 694 WGDNTYGQLGNGSTYKTNVPVQVDGLE--NIVKIIAGRDSSFAITKDGDVWAWGKNNCGQ 751
Query: 103 LG--ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG ++N L P++I K K +V +G + + DG + G N +G + LG
Sbjct: 752 LGDGTTQN---RLTPVKIDAFKGCKSIV---SGMDFTMVLMNDGTVIGVGSNVSGVMTLG 805
Query: 159 KKAAKVIPIPTKVE 172
IPI K++
Sbjct: 806 FSDRSFIPIEVKIK 819
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 167/341 (48%), Gaps = 28/341 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS----AFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG G G+LGLG E PV A ++ +ACG HTL L + G V + G N
Sbjct: 5 WGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASCGDN 64
Query: 99 DFGQLGISENIGY---SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG G S P I L+ ++VV +S G HS A+ G +Y WG + GQ
Sbjct: 65 SRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQ 124
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G+ ++ IP + LS Q A G + S+A+T G++ SWG G+LG G++
Sbjct: 125 LGTGELGDRL--IPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKD 182
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S S+ +P+ + L+G+ + AAG HS + +G VY +G ++ +
Sbjct: 183 IS--------SQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQ 234
Query: 275 GNHAR---RPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVL 328
+P I+ L + V CG HT VLT G +YT+G + G LG S
Sbjct: 235 AKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPK 294
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
P++V+ + + PV ++CG HT + G++L++G G
Sbjct: 295 FGPQKVE--WIDGPVSLLACGSYHTLVRISTSGQLLSFGRG 333
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 138/311 (44%), Gaps = 39/311 (12%)
Query: 92 VYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
+Y G GQLG+ + G S P + + VV ++ G H+ + DG +
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61
Query: 148 GKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
G NS GQLG L K P ++ L + G E S+AV G+V SWGAG
Sbjct: 62 GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGT 121
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G+ LG P+ I L KV A G HS + +GR++ +G
Sbjct: 122 FGQLGTGE----LG-----DRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQN 172
Query: 266 AVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ L ++ + P +S L P ++ V GG H+ L+ G +Y WG N LG
Sbjct: 173 IHGQLGLGKDISSQASPQQVSALDGIPLAQ-VAAGGAHSFALSLSGVVYGWGRNNAHQLG 231
Query: 322 IGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
+ E++ P+S + V VSCG +HTA +++ GS TF +D
Sbjct: 232 LSQAK---PKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ--------NGSVYTFGDD 280
Query: 377 GHSSGGQLDRG 387
S GQL R
Sbjct: 281 ---SAGQLGRN 288
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S+ P SA + L +A GGAH+ L+ +G VY G N+
Sbjct: 169 WGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAH 228
Query: 102 QLGISENIGYS--LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+S+ +P I+ L+ +V +S G H++ +T +G +Y +G +S GQLG
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRN 288
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
++ P KVE + G + A + V ++ G++LS+G G R
Sbjct: 289 SSSSPKFG-PQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRGPLQR 337
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 165/350 (47%), Gaps = 24/350 (6%)
Query: 19 KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
+LG+ C + S + +WG GD GRLG+ + ++++P V ++ ++ +
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GG H + LTE G VY G FG LG L L K +V +S G H++A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAV 202
Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
T GELY WG++ G+LG G + PTKV+ L GF ++A+T
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFF-TMALTK 261
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG + LGHG ++ + P+++ LE V + A G H+A +
Sbjct: 262 SGQLWSWGGNANHELGHGTRAN---------NWKPKVVAALEDVTLVQVACGGFHAAALT 312
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
++G+V +G ++ + + P+++ + + CG T +T G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372
Query: 313 GSNENGCLGI-GSIDVLHSPERVQGP---FSESPVDQ--VSCGWKHTAAI 356
G N + LGI G D P VQ P ++PV+ VSCG H I
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCI 422
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 159/348 (45%), Gaps = 39/348 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
WG G +G++G GS ++ PV+ S + + +A CG H++
Sbjct: 40 WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
E V+ G D G+LGI +P ++ K V S G H+ A+T G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
Y WG + G LG G +++P L G + + + G + AVT G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHTAAVTESGELYTW 211
Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G G GRLGHG + + P ++ L+ V + + G + + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALD-VPIALVYCGGFFTMALTKSGQLW 266
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G A ++ + +P +++ L +V CGG+H LT G++ TWG NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LG G+++ P V+ ++ ++CG TAAI+E G + TWG
Sbjct: 327 QLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWG 373
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 51/275 (18%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
SS + E++ WG+ ++GQ+G G + + +P+ K+ +G+ Q + +
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+V VT G V WG G GRLG E ++Y P + ++ +
Sbjct: 88 NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVV-- 294
V++A+AG LH+ + E G VY +G A + G+ + L+ +L P+ + +V
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GHGSYERELLPRLLEGPWKDRIVHV 192
Query: 295 -CGGYHTCVLTSGGELYTWGSNE-NGCLGIGSIDV-----LHSPERVQGPFSESPVDQVS 347
GG HT +T GELYTWG +E G LG G+ D+ L P +VQ + P+ V
Sbjct: 193 SAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA--LDVPIALVY 250
Query: 348 CGWKHTAAISEGKILTWGWGGS------HGTFSED 376
CG T A+++ L W WGG+ HGT + +
Sbjct: 251 CGGFFTMALTKSGQL-WSWGGNANHELGHGTRANN 284
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 197 KVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKI----AAAGF 247
+V +WG G G++GHG E + ++ L+ + I+ K ++ G
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
HS E V+++G ++ + +P + ++ + GG H LT G
Sbjct: 96 FHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTEVG 154
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
+YTWG G LG GS + P ++GP+ + V VS G HTAA++E G++ TWG
Sbjct: 155 NVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIV-HVSAGGSHTAAVTESGELYTWGR 213
Query: 367 GGSHGTFSEDGHSSGGQLDRGQLT 390
G GH + +D G L+
Sbjct: 214 DEGEGRL---GHGNPDIMDEGALS 234
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 131 bits (329), Expect = 7e-28, Method: Composition-based stats.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 35/285 (12%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+ + PL+ +K+ +++S G+ H + IT DGELY WG N +GQLG G + K + +P +
Sbjct: 1113 FPMAPLKN---EKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKR 1169
Query: 171 VECLSG---IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
V+ G IF + G E ++AV V SWG+ G+LGHG ++ ++
Sbjct: 1170 VDFFRGKSPIFMVEC--GGEHTIAVDSNYFVYSWGSDKFGQLGHGT--------KAVNQS 1219
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR---P 281
P++I+EL G K++ AAGF H+ + ++G ++ FG ++ F N R
Sbjct: 1220 RPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEIN 1279
Query: 282 SLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+++ L + + ++ CG H+ + + GE+Y+WG + G LG + + P ++
Sbjct: 1280 AIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIE- 1338
Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSS 380
+ V ++SCG HT A ++ K + +WG G H GHSS
Sbjct: 1339 --TLRGVTKISCGHFHTVATTDLKNVYSWG-SGEHMKL---GHSS 1377
Score = 119 bits (297), Expect = 3e-24, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 6/292 (2%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGL--KKEV 125
EK ++K ++CG H +T+ G +Y G N GQLG + +L P R+ K +
Sbjct: 1121 EKKAIK-VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPI 1179
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ G H+ A+ + +Y WG + GQLG G KA P +E L+G + A G
Sbjct: 1180 FMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAG 1238
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G++ S+G G G+LG G S R ++ +G K+ A
Sbjct: 1239 FAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIAC 1298
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
GF HS ENG VY +G ++ + + +P LI L ++ CG +HT T
Sbjct: 1299 GFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKISCGHFHTVATTD 1358
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+Y+WGS E+ LG S D S +V F + V +V CG HT I+
Sbjct: 1359 LKNVYSWGSGEHMKLGHSS-DKDESVPKVVDFFIQKNVSKVVCGQNHTMTIT 1409
Score = 113 bits (283), Expect = 2e-22, Method: Composition-based stats.
Identities = 107/373 (28%), Positives = 151/373 (40%), Gaps = 68/373 (18%)
Query: 43 WGNGDYGRLGLGSLE---SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ G+LG G LE + P F K + + CGG HT+ + VY+ G +
Sbjct: 1146 WGSNQSGQLGHG-LEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSD 1204
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
FGQLG P I L + +Q I+ G+ H+ + GEL+ +G GQLG
Sbjct: 1205 KFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGT 1264
Query: 158 GKKAAKVIPIPTKVECLSGIFT-------KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G +K IP ++ + G Q A GF SV + G+V SWG G G+LG
Sbjct: 1265 GSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLG 1324
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
H +I PRLI+ L GV KI + G H+ + VY +G K+
Sbjct: 1325 HKVFENI---------SKPRLIETLRGV-TKI-SCGHFHTVATTDLKNVYSWGSGEHMKL 1373
Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLT---------------------SGG 307
P ++ +VVCG HT +T S
Sbjct: 1374 GHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSS 1433
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD------------QVSCGWKHTAA 355
+Y WGS E+G LG+G ++ PF + P+ +SCG +A
Sbjct: 1434 PIYAWGSAEHGKLGLGG--------DLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAM 1485
Query: 356 I-SEGKILTWGWG 367
I S I WG G
Sbjct: 1486 ITSNNAIYVWGCG 1498
Score = 106 bits (264), Expect = 2e-20, Method: Composition-based stats.
Identities = 94/344 (27%), Positives = 148/344 (43%), Gaps = 55/344 (15%)
Query: 39 FAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
F WG+ +G+LG G+ ++ RP V ++A+A G AH + L ++G +++ G
Sbjct: 1197 FVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGY 1256
Query: 98 NDFGQLGI----SENIGYSLEPLRI-SGLKK----EVVQISTGYHHSSAITVDGELYMWG 148
DFGQLG S+NI +E I GL+ ++ QI+ G+ HS + +GE+Y WG
Sbjct: 1257 GDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWG 1316
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
GQLG K + I P +E L G+ + + G +VA T V SWG+G +
Sbjct: 1317 LGKQGQLG--HKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLKNVYSWGSGEHMK 1372
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI--------------D 254
LGH + E P+++ V G H+ I D
Sbjct: 1373 LGHSSDKD---------ESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDED 1423
Query: 255 E---NGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---------EVVCGGY 298
E NG+ +Y +G K+ G + P +P + ++ CG
Sbjct: 1424 EENMNGKSSSPIYAWGSAEHGKLGL--GGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSD 1481
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ ++TS +Y WG G +G G D + P R+ S P
Sbjct: 1482 FSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISLNDSTKP 1525
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 146/323 (45%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K A++ GG H + L+ G VY+ G D G
Sbjct: 4052 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4112 KLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4171
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4172 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4224 ---SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4280
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H + GE++TWG N+ G LG G+ LH P V
Sbjct: 4281 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA- 4339
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4340 LQGKKITRVACGSAHTLAWSTAK 4362
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 3070 GEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3129
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3130 KLGHGNCISLD-KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3188
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3189 ITQTRP--KLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG----- 3241
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP L+ L + V G S + + G V+ +G ++ +H
Sbjct: 3242 ----SDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3297
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3298 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHD 3357
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 3358 -LEDARVNRVSCGSSHSIA 3375
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G +Y+TG G
Sbjct: 3999 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKIYSTGYGAAG 4057
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S I LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG
Sbjct: 4058 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH 4115
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K + P +E L G+ A G S A+T G + +WG G GRLGHG
Sbjct: 4116 GNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4169
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4170 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4224
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ D + P +
Sbjct: 4225 DGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4284
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V + ++ G H A S+ G++ TWG
Sbjct: 4285 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG 4316
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3123 WGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3182
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + I + L + + VVQ++ G + A+T DG +Y WG G+LG G
Sbjct: 3183 LGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGS 3242
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ V+ L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3243 DGCYTPL--LVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3297
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3298 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTS 3347
Query: 279 --RRPSLISKLPYSE--EVVCGGYHT 300
R+PSL+ L + V CG H+
Sbjct: 3348 VNRKPSLVHDLEDARVNRVSCGSSHS 3373
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 142/315 (45%), Gaps = 26/315 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 514 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 564
Query: 70 KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + I Y L + L+K ++
Sbjct: 565 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIF 624
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++ +GELY WG+ + G+LG G + PT V L G A G
Sbjct: 625 IACGSTYSAALSANGELYTWGRGNYGRLGHGN--FDDVMTPTLVTTLKGHTVVHVACGSG 682
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 683 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 733
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
G SA + +G VY +G ++ H R P +I L +++ G H L
Sbjct: 734 GSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILAL 793
Query: 304 TSGGELYTWGSNENG 318
T +Y WG N+ G
Sbjct: 794 TEDQFVYGWGRNDYG 808
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 176/370 (47%), Gaps = 28/370 (7%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ K +R + + Q+ +WG D +LG G S+ + PV K
Sbjct: 2987 FLASDWEVLQKQIAIQRSVDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPVYSETLSK- 3044
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 3045 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNMCEPKAIPFLSQFVIKKV 3102
Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ +G H+ A+T DG+++ WG+ +G+LG G + + P +E L + A G
Sbjct: 3103 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEVLKSKRIRDIACGS 3160
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A G
Sbjct: 3161 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALIGHRVVQVACG 3211
Query: 247 F--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCV 302
+ + +G VY +GD K+ + P L+ +L +V CG +
Sbjct: 3212 SRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLA 3271
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
LT GE++TWG + LG G+ + P V+G + V+ G H A+++ G++
Sbjct: 3272 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDTGQV 3330
Query: 362 LTWGWGGSHG 371
WG HG
Sbjct: 3331 YAWG-DNDHG 3339
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4105 WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4164
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4165 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4222
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4223 -GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4279
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 4280 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 4332
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4333 RPRLVHALQGKKITRVACGSAHT 4355
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 142/291 (48%), Gaps = 23/291 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L P +S L+ +Q++ G A+T DG++Y
Sbjct: 3993 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKIYS 4050
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + IPT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4051 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG 4108
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG + S P+LI++L GV++ A G HSA I G +Y +G
Sbjct: 4109 DDGKLGHGNK---------VSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGK 4159
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
++ + + RP ++ L + +V CG T +T +++WG + G L
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4219
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G G D P ++ + V +V CG + + A++ G + TWG G H
Sbjct: 4220 GRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH 4269
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 140/316 (44%), Gaps = 37/316 (11%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C A + +K L C + L+ G VY N+ + E P R+
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 560
Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G + + + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 561 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTIS--YDEPKLIEALL 618
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G S A++ G++ +WG G GRLGHG ++ TP L+ L
Sbjct: 619 EKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVM---------TPTLVTTL 669
Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
+G V A +G + C+ +G V+ +GD K+ + ++ P ++ KL
Sbjct: 670 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 729
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+V CG + LT+ GE+YTWG + LG GS + + P+ ++ + V +S G
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES-LRDRKVKDLSVGTT 788
Query: 352 HTAAISEGKILTWGWG 367
H A++E + + +GWG
Sbjct: 789 HILALTEDQFV-YGWG 803
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 113/239 (47%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + KV +P E LS + Q A G + AVT GK+ S
Sbjct: 3994 GAIYGWGHNHRGQLG-GLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYST 4051
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G +GRLG G S++ P L++ ++ V +K A +G H + G V
Sbjct: 4052 GYGAAGRLGIGGTDSVM---------IPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHV 4102
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP LI L E ++ CGG+H+ +TS G LYTWG
Sbjct: 4103 YSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY 4162
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G D P+ V+ + V V+CG T +++ + W WG G +G
Sbjct: 4163 GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWGDGDYGKL 4219
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 644 WGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 703
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 704 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSE 763
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G +A+T V W GR +GQ LG
Sbjct: 764 --EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 816
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 817 IISEPTLCPTL 827
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y+WG N QLG G K +K I +P E LS + A G + V+ GK+ + G
Sbjct: 3014 VYVWGLNDKDQLG-GLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGE 3071
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++++ P+ I L +K A +G H+ + ++G+V+
Sbjct: 3072 GTNGRLGLGDDNNMC---------EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3122
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P LI L ++ CG H+ + S GELYTWG E G
Sbjct: 3123 WGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3182
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG--GSHGTFS 374
LG G P+ VQ V QV+CG + A ++G + +WG G G G
Sbjct: 3183 LGHGDTITQTRPKLVQALIGHRVV-QVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG 3241
Query: 375 EDGHSSGGQLDR 386
DG + +DR
Sbjct: 3242 SDGCYTPLLVDR 3253
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + A + + +ACG AHTL
Sbjct: 4315 WGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL 4356
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 162/315 (51%), Gaps = 34/315 (10%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRI 118
+ P VCS + + LACG HT F+ + G +Y G N G+LGI +++ S +P +
Sbjct: 13 YYPRVCSF--QIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLV 70
Query: 119 SGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
S L K +V+Q+S G+ H+ AI GEL+ WG +S GQLG+ + P L GI
Sbjct: 71 SALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGI 130
Query: 178 --FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
F + G+ +VAV G+V S+G+G G+LG G ++ +Y P L+ L
Sbjct: 131 NTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQN---------KQYKPFLLNSL 181
Query: 236 -EGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSE- 291
+ +KVK GF H+ +DE+GRVY G D EGN P L+ +L +S
Sbjct: 182 SQIIKVK---CGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGN-ISSPRLVLELEHSFI 237
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+ + G H+ +T E+Y +G ++ G L+ P+ V+ + V+++S G
Sbjct: 238 KKIFAGSHSAAITDANEIYFFGKSQLG-------QFLY-PQLVR--ICQGDVNEISIGNH 287
Query: 352 HTAAIS-EGKILTWG 365
A++ +GK+ +WG
Sbjct: 288 FGVAVTYDGKVYSWG 302
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 31/323 (9%)
Query: 44 GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G+ G+LG+G SL++ ++P + SA K+ + ++CG +HT + ++G +++ G + G
Sbjct: 47 GSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEG 106
Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLGI+ N G P ++ G+ V +S GY+H+ A+ +G++ +G GQLG
Sbjct: 107 QLGINSN-GSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLG 165
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + LS I + GF ++ + G+V S G G+LG G
Sbjct: 166 TGNQNKQYKPFL--LNSLSQII--KVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEG 221
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ +PRL+ ELE +K AG HSA I + +Y FG + + L+
Sbjct: 222 NIS--------SPRLVLELEHSFIKKIFAG-SHSAAITDANEIYFFGKSQLGQFLY---- 268
Query: 277 HARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P L+ E+ G + +T G++Y+WG N+ G LG G DV P V+
Sbjct: 269 ----PQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVE 324
Query: 336 GPFSESPVDQVSCGWKHTAAISE 358
P +E V +CG + + +
Sbjct: 325 -PLNEKKVISATCGENYVICLGQ 346
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G+LG G+ +++P + ++ + + + CG HTLFL E+G VY+ GLND GQ
Sbjct: 156 FGSGKKGQLGTGNQNKQYKPFLLNSLSQ--IIKVKCGFYHTLFLDESGRVYSCGLNDEGQ 213
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N G P + L+ ++ HS+AIT E+Y +GK+ GQ
Sbjct: 214 LGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQF------- 266
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V G + ++G VAVT GKV SWG G+LG G
Sbjct: 267 ---LYPQLVRICQGD-VNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGD--------- 313
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDRAVDKMLFQEGNHARR 280
S P L++ L KV A G + C+ + N R+ + KML +
Sbjct: 314 SDVRIIPSLVEPLNEKKVISATCGENYVICLGQVMNSRLAKLASQK--KMLKFQSPDNNN 371
Query: 281 PSLIS 285
SLI+
Sbjct: 372 NSLIN 376
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 157/303 (51%), Gaps = 20/303 (6%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
S+K +ACGG H++FL E G VY GLN GQLG E G +P +I L + ++ ++
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGALADQHIIHVAC 92
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A++ G+L+ WG S+GQLG + IP ++ L+ Q + G +
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+ +WG G+LG G+E S+ +P+ +K LEG+ + AAG HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFP--------SQASPQRVKSLEGIPLAQVAAGGAHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
+ +G V+ +G ++ + + P + KL +++VV CG HT VLT G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
++T+G+ G LG S++ +P RV S V Q++CG +HT A S G I +G
Sbjct: 263 GVFTFGAGSFGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321
Query: 366 WGG 368
G
Sbjct: 322 CGA 324
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG + P I
Sbjct: 75 KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++++ Q+S G H A+ DG+ + WG+N +GQLGLGK+ P +V+ L GI
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E T +P +K L K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
HT S G +Y +G G LG G + P V+G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 25/284 (8%)
Query: 104 GISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG ++
Sbjct: 14 GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREG 73
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P ++ L+ A G S+A++ G++ SWGAG G+LGH
Sbjct: 74 NK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTED----- 124
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
S PRLIK+L + + G H + +G+ + +G ++ F
Sbjct: 125 ---SVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS 181
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP V+
Sbjct: 182 PQRVKSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLL 240
Query: 338 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
++ V +SCG +HTA +++ G + T+G G+F + GH S
Sbjct: 241 RTQKVV-YISCGEEHTAVLTKSGGVFTFG----AGSFGQLGHDS 279
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL R P + ++CG HT LT++G V+ G FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 334 CNVKCPSPVK 343
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 156/334 (46%), Gaps = 30/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ + ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 102 WGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNA 161
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG V +S G H++ IT G+LY +G + G LG G
Sbjct: 162 GLLGHGSNVSHWI-PKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 220
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+A+ P +VE L G+ T + G + AV GK+ +WG G RL
Sbjct: 221 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 278
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P I L AA G + + +G ++ G +V
Sbjct: 279 GHGDRSSKL---------KPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-SVYG 328
Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L N R P L+ + EV CG YH VLT+ GE+YTWG NG LG G I
Sbjct: 329 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIA 388
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
P V+ + V +V+CG TAAI + K
Sbjct: 389 DRKVPTLVEA-LRDRSVKRVACGSSFTAAICQHK 421
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 35/253 (13%)
Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G + A + +P +E + A G + + VT
Sbjct: 35 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +++ + PRL++ L V++ A G H+ +
Sbjct: 95 RQSEVFTWGEECSGRLGHGTGTNV---------FQPRLVESLSICNVELIACGEFHTCAV 145
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S LP S V CG +HT ++TS G
Sbjct: 146 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-TVSCGTWHTALITSSG 204
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+LYT+G G LG G+ P+ V+ + VSCG HTAA+ E
Sbjct: 205 QLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIISQSNAS 263
Query: 359 -GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 264 SGKLFTWGDGDKY 276
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P+ ++ + V A G H+A + V+ +G+ ++ G + +P
Sbjct: 63 TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPR 122
Query: 283 LISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGP 337
L+ L E + CG +HTC +T+ G+LYTWG ++ G LG GS +V H P+RV GP
Sbjct: 123 LVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS-NVSHWIPKRVSGP 181
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
PV VSCG HTA I S G++ T+G GTF GH
Sbjct: 182 LDGLPVSTVSCGTWHTALITSSGQLYTFG----DGTFGVLGH 219
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V ++ G H++ +T E++ WG+ +G+LG G + P VE
Sbjct: 70 KPLE-SNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHG--TGTNVFQPRLVES 126
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + A G + AVT G + +WG G +G LGHG + S + P+
Sbjct: 127 LSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS---------NVSHWIPKR 177
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISKLP 288
+ L+G+ V + G H+A I +G++Y FGD + GN A P + L
Sbjct: 178 VSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFG--VLGHGNRASCSYPKEVESLK 235
Query: 289 --YSEEVVCGGYHTCVLT---------SGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 236 GLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHG 281
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 146/323 (45%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K A++ GG H L L+ G VY+ G D G
Sbjct: 4001 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E++ I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4061 KLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4120
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4121 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4173 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4229
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H + GE++TWG N+ G LG G+ LH P V
Sbjct: 4230 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA- 4288
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4289 LQGKKITRVACGSAHTLAWSTAK 4311
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 3019 GEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3078
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N+ +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3079 KLGHGNNMSLD-KPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3137
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3138 VTQA--RPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 3190
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP +++ L G+ V G S + + G V+ +G ++ +H
Sbjct: 3191 ----SDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3246
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3247 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVH- 3305
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 3306 ELEDARVNRVSCGSSHSIA 3324
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 455 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 505
Query: 70 KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + + Y L + L+K +V
Sbjct: 506 DKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVF 565
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++V GELY WG+ + G+LG G + IPT V L G A G
Sbjct: 566 IACGSTYSAALSVSGELYTWGRGNYGRLGHGN--FDDVMIPTLVTTLKGHTVVHVACGSG 623
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 624 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 674
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
G SA + +G VY +G ++ H R P +I L +++ G H VL
Sbjct: 675 GSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVL 734
Query: 304 TSGGELYTWGSNENG 318
T +Y WG N+ G
Sbjct: 735 TEDQFVYGWGRNDYG 749
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 131/266 (49%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3072 WGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + L + + VVQ++ G + A+T DG +Y WG G+LG G
Sbjct: 3132 LGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 3191
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ VE L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3192 DGCYTPL--VVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3246
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 ------RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTS 3296
Query: 279 --RRPSLISKLPYSE--EVVCGGYHT 300
R+PSL+ +L + V CG H+
Sbjct: 3297 VNRKPSLVHELEDARVNRVSCGSSHS 3322
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G VY+TG G
Sbjct: 3948 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 4006
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S I LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG
Sbjct: 4007 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGH 4064
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K + P +E L G+ A G S A+T G + +WG G GRLGHG
Sbjct: 4065 GNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4118
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4119 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4173
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ D + P +
Sbjct: 4174 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4233
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V + ++ G H A S+ G++ TWG
Sbjct: 4234 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG 4265
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 144/300 (48%), Gaps = 45/300 (15%)
Query: 88 ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
+ VY GLND QLG + + L+P+ I+G K + +S
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQ------- 3011
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG P P + LS K+ A+ G + ++A+T
Sbjct: 3012 ---EGKLYACGEGTNGRLGLGDDNNVCEPKP--IPFLSQFVIKKVAVHSGGKHALALTQD 3066
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG S+ P+LI+ L+ +++ A G HSA I
Sbjct: 3067 GKVFSWGEGEDGKLGHGNNMSL---------DKPKLIETLKSKRIRDIACGSGHSAAIAS 3117
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYT 311
NG +Y +G ++ + RP L+ L +V CG T LT+ G +Y+
Sbjct: 3118 NGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYS 3177
Query: 312 WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
WG + G LG G D ++P ER+ G V QV CG + + A+++ G++ TWG G
Sbjct: 3178 WGDGDFGKLGRGGSDGCYTPLVVERLNG----LGVVQVECGAQFSLALTKYGEVWTWGKG 3233
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4054 WGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGR 4113
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4114 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4171
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4172 -GSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 4229 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 4281
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4282 RPRLVHALQGKKITRVACGSAHT 4304
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 23/291 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L P +S L+ +Q++ G A+T DG++Y
Sbjct: 3942 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3999
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + IPT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4000 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEG 4057
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG + + + R P+LI++L GV++ A G HSA I G +Y +G
Sbjct: 4058 DDGKLGHGNK---MSYDR------PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGK 4108
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
++ + + RP ++ L + +V CG T +T +++WG + G L
Sbjct: 4109 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4168
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G G D P ++ + V +V CG + + A++ G + TWG G H
Sbjct: 4169 GRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH 4218
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 141/317 (44%), Gaps = 39/317 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C A + +K L C + L+ G VY N+ + E P R+
Sbjct: 456 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 501
Query: 119 SGLKKEVVQI----STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
G ++V + S G HH A+T DG +Y WG G+LG G + P +E L
Sbjct: 502 HGFSDKLVTMIASHSDGKHHL-ALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIEAL 558
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
A G S A++ G++ +WG G GRLGHG ++ P L+
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVM---------IPTLVTT 609
Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L+G V A +G + C+ +G V+ +GD K+ + ++ P ++ KL
Sbjct: 610 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 669
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG + LT+ GE+YTWG + LG GS + + P+ ++ + + +S G
Sbjct: 670 VKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIES-LRDKKIKDLSVGA 728
Query: 351 KHTAAISEGKILTWGWG 367
H ++E + + +GWG
Sbjct: 729 THILVLTEDQFV-YGWG 744
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 113/239 (47%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + KV +P E LS + Q A G + AVT GKV S
Sbjct: 3943 GAIYGWGHNHRGQLG-GLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 4000
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G +GRLG G S++ P L++ ++ V +K A +G H + G V
Sbjct: 4001 GYGAAGRLGIGGTDSVM---------IPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHV 4051
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP LI L E ++ CGG+H+ +TS G LYTWG
Sbjct: 4052 YSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRY 4111
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G D P+ V+ + V V+CG T +++ + W WG G +G
Sbjct: 4112 GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWGDGDYGKL 4168
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 116/253 (45%), Gaps = 21/253 (8%)
Query: 124 EVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
EV+Q S T E +Y+WG N QLG G K +K I +P E LS +
Sbjct: 2941 EVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIH 2998
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G + V+ GK+ + G G +GRLG G ++++ P+ I L +K
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC---------EPKPIPFLSQFVIK 3049
Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
A +G H+ + ++G+V+ +G+ K+ +P LI L ++ CG
Sbjct: 3050 KVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGS 3109
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---A 354
H+ + S GELYTWG E G LG G P+ VQ V QV+CG + A
Sbjct: 3110 GHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVV-QVACGSRDAQTMA 3168
Query: 355 AISEGKILTWGWG 367
++G + +WG G
Sbjct: 3169 LTTDGCVYSWGDG 3181
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 585 WGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 644
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 645 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSE 704
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G + +T V W GR +GQ LG
Sbjct: 705 --EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGW-----GRNDYGQIDPTLGS 757
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 758 VISEPTLCPTL 768
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + ++ G V+ G ND GQ
Sbjct: 4212 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 4271
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4272 LGDGTTSALH-RPRLVHALQGKKITRVACGSAHTLA 4306
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 76/202 (37%), Gaps = 65/202 (32%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T G V SWG G GRLGHG + S P+LI+ L
Sbjct: 522 LALTQDGCVYSWGNGDGGRLGHGD---------TVSYDEPKLIEAL-------------- 558
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+++N ++F + CG ++ L+ GEL
Sbjct: 559 ---LEKN-------------IVF--------------------IACGSTYSAALSVSGEL 582
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGW 366
YTWG G LG G+ D + P V V V+CG + + + G + +WG
Sbjct: 583 YTWGRGNYGRLGHGNFDDVMIPTLVTT-LKGHTVVHVACGSGDSQTLCVTASGIVFSWGD 641
Query: 367 G--GSHGTFSEDGHSSGGQLDR 386
G G G DG + +D+
Sbjct: 642 GDYGKLGRGGTDGSKTPKIVDK 663
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDTRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 622
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D +SP V+ + V V CG TAAI
Sbjct: 623 TDDRNSPTLVEA-LKDKQVRSVVCGINFTAAI 653
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ ++CGG H +T+ G VY+ G G+LG + +P + L ++ ++ G
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLVEALAHMNIELVACG 371
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + G LG G + + +P L GI + G +
Sbjct: 372 EYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGP-LEGIHVSSISCGPWHT 430
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G H
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAACGVWH 481
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 482 TAAVVEVMVGNSSTSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVASLVEPNFCQV 539
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS+ G LG D + P RV+G ++ V+++SCG H
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEISCGAYHV 598
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 599 AVLTSRTEVYTWGKGAN 615
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ + N + G A +P +E + + + G + VT
Sbjct: 268 GDVFMWGEGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVT 327
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG GRLGHG + + P+L++ L + +++ A G H+ +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLVEALAHMNIELVACGEYHTCAV 378
Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
+G +Y +G+ + L GN H L L + + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
L+T+G G LG G L P V+ V + +CG HTAA+ E
Sbjct: 439 LFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSTSN 497
Query: 359 ---GKILTWGWG 367
GKI TWG G
Sbjct: 498 CSSGKIFTWGDG 509
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
+ R G+ + + L E+ RL V+ + G H+ + + G VY +G+
Sbjct: 286 NSRFGNSSGAKMDCLLPKPLEFAGRL-------DVQNISCGGRHATLVTKQGEVYSWGEE 338
Query: 266 AVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ +P L+ L + E V CG YHTC +T G+LYTWG NG G
Sbjct: 339 SGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFG 395
Query: 324 SI----DVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 377
+ +V H P+R+ GP V +SCG HTA + S G++ T+G G+F G
Sbjct: 396 LLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG----DGSFGVLG 451
Query: 378 H 378
H
Sbjct: 452 H 452
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 153/340 (45%), Gaps = 47/340 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G +F
Sbjct: 328 WGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNF 387
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 388 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 446
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 447 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 504
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 505 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS-- 553
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 554 --PVYGQLGN----PQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 607
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D + P V+ + V ++CG TAAI
Sbjct: 608 NGRLGHGDTDDRNFPSLVEA-LKDKQVKSIACGTNFTAAI 646
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 159/320 (49%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G V++ G G+L G+ ++ L P I L ++ ++
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNINIELVA 362
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 363 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGIHVSSISCGP 420
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 421 WHTAVVTSSGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACG 471
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ + P+ ++ L P
Sbjct: 472 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNF 529
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG T LT+ G +YT GS G LG D P RV+G S+S V++++CG
Sbjct: 530 CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGRLSKSFVEEIACGA 588
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S+ ++ TWG G +
Sbjct: 589 YHVAVLTSKTEVYTWGKGAN 608
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 119/265 (44%), Gaps = 43/265 (16%)
Query: 131 GYHHSSAITVDGELYMWGKNSNGQL----------GLGKKAAKVIPIPTKVECLSGIFTK 180
G+ S A+ G++++WG+ + + G G K ++P +E + +
Sbjct: 253 GHDDSDAL---GDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLP--KALESTVVLDVQ 307
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G + VT G+V SWG GRLGHG +S +L P+LI L + +
Sbjct: 308 NIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDSLSNINI 358
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVC 295
++ A G H+ + +G +Y +GD + L GN P ++ + + + C
Sbjct: 359 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 418
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G +HT V+TS G+L+T+G G LG G + P V+ V + +CG HTAA
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV-RAACGVWHTAA 477
Query: 356 ISE-------------GKILTWGWG 367
+ E GK+ TWG G
Sbjct: 478 VVEVMVGNSSSSNCSSGKLFTWGDG 502
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G V+ +G+ + ++ + P LI L
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
E V CG YHTC +T G+LYTWG + G LG G+ +V H P+RV GP V
Sbjct: 355 NINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 413
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 414 SSISCGPWHTAVVTSSGQLFTFG----DGTFGVLGH 445
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 139/285 (48%), Gaps = 20/285 (7%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
GG H L L+ G VY+ G D G+LG N P I L+ KEVV ++ G HS+
Sbjct: 676 GGKHCLALSAEGEVYSWGEGDDGKLGHG-NKSSCERPRVIESLRGKEVVDVACGGAHSAC 734
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT GELY WGK G+LG G ++ P KVE LSG + A G Q++ VT
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQLRP--KKVEALSGWRVRCVACGSGDAQTLCVTDD 792
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
V SWG G G+LG G S P + L+G+ V G S +
Sbjct: 793 DCVWSWGDGDYGKLGRGG---------SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTA 843
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW 312
+G VY +G ++ +H RRP ++ L ++V+C G H T GE+YTW
Sbjct: 844 SGSVYTWGKGDYHRLGHGTDDHVRRPKRVAAL-QGKKVICIAVGSLHCVACTDTGEVYTW 902
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
G N+ G LG G+++ +H P R+ +++VSCG HT A S
Sbjct: 903 GDNDEGQLGDGTVNAIHKP-RLVAALQGKKINRVSCGSAHTVAWS 946
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP V + + +ACGGAH+ +T +G +Y G +G+
Sbjct: 692 WGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGR 751
Query: 103 LGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P ++ SG + V +G + +T D ++ WG G+LG G
Sbjct: 752 LGHGDS-DDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRG- 809
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P +V+ L G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 810 -GSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHV-- 866
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G KV A G LH + G VY +GD ++ N
Sbjct: 867 -------RRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIH 919
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
+P L++ L V CG HT
Sbjct: 920 KPRLVAALQGKKINRVSCGSAHT 942
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 132/290 (45%), Gaps = 21/290 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G + G N GQLG E L P+ L +Q+ G A+T DG++Y
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKL-PMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+ LG + PT +E L +F K+ + G + +A++ G+V SWG G
Sbjct: 639 GYGAGGR--LGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG +SS PR+I+ L G +V A G HSACI +G +Y +G
Sbjct: 697 DGKLGHGNKSSC---------ERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKG 747
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
++ + + RP + L V CG T +T +++WG + G LG
Sbjct: 748 RYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLG 807
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
G D P RV V +V CG + + A++ G + TWG G H
Sbjct: 808 RGGSDGCKVPLRVDL-LQGMGVIRVECGSQFSVALTASGSVYTWGKGDYH 856
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G + WG N GQLG G + AKV +P E LS + Q G + AVT GKV +
Sbjct: 581 GTILGWGHNHRGQLG-GVEGAKV-KLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRV 259
G G GRLG G S+ P L++ L+ V +K + +G H + G V
Sbjct: 639 GYGAGGRLGIGGTDSV---------SCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEV 689
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ + RP +I L E +V CGG H+ +T+ GELYTWG
Sbjct: 690 YSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRY 749
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G D P++V+ S V V+CG T +++ + W WG G +G
Sbjct: 750 GRLGHGDSDDQLRPKKVEA-LSGWRVRCVACGSGDAQTLCVTDDDCV-WSWGDGDYGKL 806
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 30/341 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS+ + R V + ++A G AH+L L V+ G N+ GQ
Sbjct: 72 WGGNGSGQLGTGSVSFQ-RVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQ 130
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G N+ P ++ GL +VV ++ G HS A+ DG ++ WG N GQLG G +
Sbjct: 131 VGDGTNVDRP-TPQKVPGLS-DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGH--S 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V L+G+ A GF+ S+AV G V +WGA GSG+LG G L
Sbjct: 187 QPGPSPAQVVGLTGVVALAA--GFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRL---- 240
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + +L+GV AG H+ + +G V+ +G + +M +G RPS
Sbjct: 241 -----APTQVSQLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQM--GDGTWTDRPS 291
Query: 283 --LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
++ + ++ V + VL G ++ WG N G LGIG+ P RV+G
Sbjct: 292 PVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRG---L 348
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSS 380
V ++ G +H + ++G + TWG HG + GH S
Sbjct: 349 GAVTSLAAGTQHAVVLRADGTLWTWG----HGATGQLGHGS 385
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 150/326 (46%), Gaps = 25/326 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G S+ P + ALA G +L + G V+A G N GQ
Sbjct: 173 WGSNFYGQLGRG--HSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQ 230
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I L P ++S L+ V ++ G +H+ A+ DG ++ WG NS+GQ+G G
Sbjct: 231 LGDGTYI-QRLAPTQVSQLQG-VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD 288
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V+ S K A S+ + G V +WG G+LG G
Sbjct: 289 R----PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIG---------- 334
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ +P ++ V AAG H+ + +G ++ +G A ++ P
Sbjct: 335 -TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPE 393
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++++L V G +H+ S G ++TWG N NG LG G+ H P RV G S
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPG---LSG 450
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWG 367
V VS H+ A+ S+G + WGWG
Sbjct: 451 VVSVSASGHHSFALRSDGTV--WGWG 474
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 23/328 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P S + + A+ G H L L G V+A G N GQ
Sbjct: 223 WGANGSGQLGDGTYIQRLAPTQVSQLQ--GVSAVTAGLYHALALRSDGTVWAWGSNSSGQ 280
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G P++++ + + ++ S + DG ++ WG NS GQLG+G A
Sbjct: 281 MGDGTWTDRP-SPVQVTSIARAKA-VAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTAD 338
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+P +V L G T AA G + +V + G + +WG G +G+LGHG +L
Sbjct: 339 S--PLPVRVRGL-GAVTSLAA-GTQHAVVLRADGTLWTWGHGATGQLGHGSSERML---- 390
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+P ++ L V A+G HS +G V+ +G ++ P
Sbjct: 391 -----SPEVVTRLS--NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV 443
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L V G+H+ L S G ++ WG N G +G G+ SP RV+G S
Sbjct: 444 RVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEG---LSS 500
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
V ++ G H A+ ++G + TWG+ G+
Sbjct: 501 VKALASGGSHMVALRTDGTVWTWGYNGA 528
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 156/341 (45%), Gaps = 44/341 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ESR P+ + ++ A+A HTL L G V+A G N FGQ
Sbjct: 1128 WGGNADGQLGDGTTESRATPITVAGLG--AMVAVAPAARHTLALRSDGTVWAWGDNTFGQ 1185
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N +L P+++ GL+K V I+ G +HS A+ DG ++ WG N GQLG G A
Sbjct: 1186 LGDGSNTRRTL-PVQVVGLEK-VTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA 1243
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG----------GKVLSWGAGGSGRLGHG 212
+ +P T++ LG + +VAV GG G + + G G+LG G
Sbjct: 1244 RAVP--TRM------------LGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEG 1289
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
T+ +P + EL+ +V+ AG HS + E+G V+ +G ++
Sbjct: 1290 TF---------TNRLSPFQVVELD--QVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGD 1338
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
R P+ + L V G HT + G E + WG N +G LG G P
Sbjct: 1339 GTVTTRRVPAPVPGLTAIASVGAGTSHTFAV--GSETWAWGRNSHGQLGTGDSSDRLEPT 1396
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
V+G V ++ G A ++G ++WG HGT
Sbjct: 1397 LVKGLHGVKSV--LAGGDFSVAQGADGSAMSWG-TNVHGTL 1434
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 148/333 (44%), Gaps = 36/333 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLND 99
WG G+LG G+L R S E L +A G AH L +++ G V+A G N
Sbjct: 873 WGANGSGQLGDGTLGDR-----ASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANG 927
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG S P+R++GL + +S G +S A+ DG ++ WG N +GQLG G
Sbjct: 928 RGQLGDGTTT-SSASPVRVAGLSA-AMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGT 985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A+ P P V+ L+ + K G VAV G V WGA G++G G
Sbjct: 986 NVARTTPKP--VQDLADV--KAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTH----- 1036
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F R L+ +E +AG HS + + R +G ++ E +
Sbjct: 1037 FWRFRPVRVEGLLNAVE------TSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSL 1090
Query: 280 RPSLISKLPYSEEVVCG------GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P + KLP S+ +V H L + G + TWG N +G LG G+ + +P
Sbjct: 1091 EPVGV-KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPIT 1149
Query: 334 VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V G + V + +HT A+ S+G + WG
Sbjct: 1150 VAGLGAMVAVAPAA---RHTLALRSDGTVWAWG 1179
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 153/336 (45%), Gaps = 24/336 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G+LG GS E P V + + ++A G H++ G V+ G N GQ
Sbjct: 373 WGHGATGQLGHGSSERMLSPEVVTRLSN--VASVASGSFHSVAALSDGSVWTWGRNTNGQ 430
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+R+ GL VV +S HHS A+ DG ++ WG+N+ GQ+G G
Sbjct: 431 LGDGTTTERHL-PVRVPGLSG-VVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKD 488
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE LS + K A G VA+ G V +WG G+G+LG G
Sbjct: 489 RA--SPARVEGLSSV--KALASGGSHMVALRTDGTVWTWGYNGAGQLGDGT--------- 535
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P + L GV AAG S + +G V+ +GD ++ G P
Sbjct: 536 TTDRRAPVQVTGLSGVTS--VAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPV 593
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++ L ++ G H + G ++ WG N G +G GS +V + +
Sbjct: 594 QVTGLTRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQV---YGLTG 650
Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
V V G H+ A++ +G + WG G ++G F + G
Sbjct: 651 VSSVVGGLYHSMALAQDGTLRAWG-GNAYGQFGDGG 685
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 20/297 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ +R P +KA+ G H + + G V+ G N FGQ
Sbjct: 973 WGANDSGQLGDGTNVARTTPKPVQDLAD--VKAVTAGAHHVVAVRHDGTVWGWGANAFGQ 1030
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + + P+R+ GL V+ S G HS A+ D WG + GQLG +
Sbjct: 1031 VGDGTHF-WRFRPVRVEGLLN-AVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGP 1088
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ K+ + + + Q + A+ G V +WG G+LG G
Sbjct: 1089 SLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGT-------- 1140
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ S TP + L G V +A A H+ + +G V+ +GD ++ +G++ RR
Sbjct: 1141 -TESRATPITVAGL-GAMVAVAPAA-RHTLALRSDGTVWAWGDNTFGQL--GDGSNTRRT 1195
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + L + G YH+ + G ++ WG N G LG G++D P R+ G
Sbjct: 1196 LPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLG 1252
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 161/388 (41%), Gaps = 83/388 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
WG +G++G G+ R+RPV L A+ + G H+L L + G +++
Sbjct: 1023 WGANAFGQVGDGTHFWRFRPVRVEGL----LNAVETSAGEQHSLALLGDERALSWGSHEY 1078
Query: 101 GQLGISENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG +E+ G SLEP+ + S + V +S + H++A+ DG + WG N++GQLG
Sbjct: 1079 GQLGDAES-GPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG 1137
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ PI V L + A ++A+ G V +WG G+LG G
Sbjct: 1138 DGTTESRATPI--TVAGLGAMVAVAPAA--RHTLALRSDGTVWAWGDNTFGQLGDGS--- 1190
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------- 263
+T P + LE KV AAG HS + E+G V+ +G
Sbjct: 1191 ------NTRRTLPVQVVGLE--KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMD 1242
Query: 264 DRAV-------------------------DKMLFQEGNHAR------------RPSLISK 286
RAV D L+ GN++ P + +
Sbjct: 1243 ARAVPTRMLGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVE 1302
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
L V GGYH+ L G ++TWG N G LG G++ P V G + + V
Sbjct: 1303 LDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPG---LTAIASV 1359
Query: 347 SCGWKHTAAISEGKILTWGWG-GSHGTF 373
G HT A+ TW WG SHG
Sbjct: 1360 GAGTSHTFAVGS---ETWAWGRNSHGQL 1384
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG GS R PV EK + A+A G H+L + E G V+A G N FGQ
Sbjct: 1178 WGDNTFGQLGDGSNTRRTLPVQVVGLEK--VTAIAAGSYHSLAVREDGTVWAWGYNVFGQ 1235
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P R+ GL V ++ G +HS + DG L+ G NS+GQLG G
Sbjct: 1236 LG-DGTMDARAVPTRMLGLDGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V L + T +A G SVA+ G V +WG G G+LG G
Sbjct: 1294 RLSPF--QVVELDQVRTVRA--GGYHSVALREDGTVWTWGHNGQGQLGDGTV-------- 1341
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P + L IA+ G S + +G + ++ + + P+
Sbjct: 1342 -TTRRVPAPVPGL----TAIASVGAGTSHTFAVGSETWAWGRNSHGQLGTGDSSDRLEPT 1396
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L+ L + V+ GG + + G +WG+N +G LGIG
Sbjct: 1397 LVKGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIG 1437
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 29/299 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G++G GS R+R V + + ++ G H++ L + G + A G N +GQ
Sbjct: 623 WGDNTEGQMGDGSWSDRFRAV--QVYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQ 680
Query: 103 LG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G ++ + P +SG+K + Y H A+ DG L WG N GQLGLG
Sbjct: 681 FGDGGVTPRVVAGAVP-GLSGIKL----LGASYLHVLAVREDGMLLTWGYNRFGQLGLG- 734
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
AA +P +V L ++ + G S+ V G VL+WG SG+LG G
Sbjct: 735 -AAGWSSLPVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGS------ 785
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T +P L + L + A+AG HS + +G V+ +G + ++ +G
Sbjct: 786 ---TTHRASPVLARNLP--CARAASAGRQHSLVLACDGTVWSWGGNSQGQL--GDGGVTS 838
Query: 280 R--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R P+ + L V+ GG + VL + G ++TWG+N +G LG G++ SP V+G
Sbjct: 839 RAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKG 897
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 149/330 (45%), Gaps = 27/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G+LG G+ R PV + + + LA G AH L + + G V+A G N GQ
Sbjct: 573 WGDGFEGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQ 630
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + +++ GL V + G +HS A+ DG L WG N+ GQ G G
Sbjct: 631 MG-DGSWSDRFRAVQVYGLTG-VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTP 688
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSILGF 220
+V+ V LSGI K + +AV G +L+WG G+LG G SS+
Sbjct: 689 RVVA--GAVPGLSGI--KLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--- 741
Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L +G ++ +AG HS + +G V +G ++ H
Sbjct: 742 --------PVQVRGLGQGRRL---SAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRA 790
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P L LP + G H+ VL G +++WG N G LG G + P +V+G +
Sbjct: 791 SPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWG 850
Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
V ++ G ++G + TWG GS
Sbjct: 851 VVAV--LAGGDSSMVLRADGTVWTWGANGS 878
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 113/300 (37%), Gaps = 68/300 (22%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK----------------- 159
R L +++ G HS +T G ++ WG N +GQLG G
Sbjct: 42 RSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDV 101
Query: 160 -------------KAAKVI-------------------PIPTKVECLSGIFTKQAALGFE 187
+A + + P P KV LS + A G
Sbjct: 102 TSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDVVA--VAAGEF 159
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S+A+ G V +WG+ G+LG G S +P + L GV AAGF
Sbjct: 160 HSLALRADGTVWAWGSNFYGQLGRGH---------SQPGPSPAQVVGLTGVVAL--AAGF 208
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTS 305
S + +G V+ +G ++ +G + +R P+ +S+L V G YH L S
Sbjct: 209 DFSLAVRSDGTVWAWGANGSGQL--GDGTYIQRLAPTQVSQLQGVSAVTAGLYHALALRS 266
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
G ++ WGSN +G +G G+ SP +V V G + +G + WG
Sbjct: 267 DGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAG--SLVLLDDGGVFAWG 324
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P + + L+ +K AA G + S+ VT G V +WG GSG+LG G S F R +
Sbjct: 38 PPAARSQALASATSKVAA-GAQHSLYVTQAGTVWAWGGNGSGQLGTGSVS----FQRVVA 92
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+ P L V AAG HS + + V+ +G ++ +G + RP+
Sbjct: 93 QQVPGL------TDVTSIAAGDAHSLALRADRTVWTWGGNNAGQV--GDGTNVDRPT-PQ 143
Query: 286 KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
K+P +VV G +H+ L + G ++ WGSN G LG G SP +V G +
Sbjct: 144 KVPGLSDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVG---LTG 200
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
V ++ G+ + A+ S+G + WG GS
Sbjct: 201 VVALAAGFDFSLAVRSDGTVWAWGANGS 228
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDFG 101
WG+ G+LG G++ +R P ++ ++ G +HT + +ET +A G N G
Sbjct: 1328 WGHNGQGQLGDGTVTTRRVPAPVPGLT--AIASVGAGTSHTFAVGSET---WAWGRNSHG 1382
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ LEP + GL V + G S A DG WG N +G LG+G
Sbjct: 1383 QLGTGDS-SDRLEPTLVKGLHG-VKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPG 1440
Query: 162 AKVIP 166
+ +P
Sbjct: 1441 QRTVP 1445
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 130 bits (327), Expect = 1e-27, Method: Composition-based stats.
Identities = 103/360 (28%), Positives = 174/360 (48%), Gaps = 28/360 (7%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+ +K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYMWG NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
H+ + EN VY FG ++ +F+ +R P ++ + CG H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
T ++T G LYT+G +G LG+G + + + P F + V V+CG H +++
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
Score = 119 bits (299), Expect = 2e-24, Method: Composition-based stats.
Identities = 97/306 (31%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
++CG HT +TE G ++ G N++GQLG+ + +P + LK E V+++ G H
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALKSERVKLTACGRTH 99
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
+ T G LY G N+ GQLGLG + T L F KQ A G S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDR-----TSFH-LVEFFNKQGPIKMLAAGSNTS 153
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G G+ES+ L TP+ + G +V + G+ H
Sbjct: 154 AALTQDGRLYMWGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202
Query: 250 SACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + +G +Y FG++ K+ NH + P ++ +P +V CGG HT LT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
E+Y++G + G LG G+ RV F + V +CG HTA I++ +L
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 GDGRHG 326
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 155/337 (45%), Gaps = 29/337 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + F S+ +LACGGAH + LT G + G + GQ
Sbjct: 23 WGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQ 82
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +L P ++ L + +S G+ HS ++ G ++ G S GQLG G A
Sbjct: 83 LGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNA 142
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ KV C + Q A G S+ + G +V +G+G G+LG +
Sbjct: 143 SHCSPV--KVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R S P+++ EGV++ AA HSA + +G VY +G F+ A P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRG------FKGFEDAHVP 247
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL----GIGSIDVLHSPERVQGP 337
++ +V G H ++ GE+Y G N G L IG H P+ +
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAK--HFPDLREFN 305
Query: 338 FSESP------VDQVSCGWKHTAAISE-GKILTWGWG 367
+ P + ++ G +H+ ++E G+I TWGWG
Sbjct: 306 LEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWG 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 14/228 (6%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
F G+G +G+LG G S PV S F + +ACG H+L L + VY G
Sbjct: 124 FVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSG 183
Query: 99 DFGQLGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG+S + S+ P +SG + E+V + HS+A++VDG +Y WG+
Sbjct: 184 KRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGR------- 236
Query: 157 LGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K + +P +CL S + + ALG+ ++A++G G+V G G L Q
Sbjct: 237 -GFKGFEDAHVP---QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNI 292
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E+ + L+G K+ AAG HS + E+G + +G
Sbjct: 293 GPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWG 340
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 16/229 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG + GQLG + P LS I A G +A+T GK LSWG
Sbjct: 20 VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI--SSLACGGAHVIALTSAGKALSWGR 77
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G SG+LGHG+ + S + Y P+ + L+G + +AG+ HS + + G V+ G
Sbjct: 78 GNSGQLGHGE-------VVSNTLY-PKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
D + ++ + P +S + +V CG H+ VL G ++Y +GS + G LG
Sbjct: 130 DGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLG 189
Query: 322 IGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
+ + + ++ P+ V G F + + H+AA+S +G + TWG G
Sbjct: 190 VSNDRVKSVNVPKVVSG-FEGVEIVGTAANGDHSAAVSVDGHVYTWGRG 237
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRISGLKK------ 123
+ +A G H L ++ G VY G N G L +NIG + LR L+K
Sbjct: 255 NFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDG 314
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
++ I+ G HS +T GE+ WG +GQLGLG + P+ ++
Sbjct: 315 TKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLD 364
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 152/300 (50%), Gaps = 17/300 (5%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG + SL ++ RP + +A E + + CG AH+L LT G VY+ G N G
Sbjct: 372 GNNDHGQLGHDVESLPNK-RPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVG 430
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + + P I + K+VVQI+ G++H A+T GELY WG N+ GQLGLG
Sbjct: 431 QLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMT 490
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV PT V+ L+G+ A G S AV+ G + WG G+LG +
Sbjct: 491 NEKV-STPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 544
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P ++ L + V+ + G S + G V+ G ++ N+
Sbjct: 545 ----SRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEIL 600
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P ++ +L S+ ++ CG HT S G++Y +G + G LGIG + ++P+ V+GP
Sbjct: 601 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGP 660
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 15/297 (5%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHS 135
ACG +HTL LT G +Y+ G ND GQLG + P ++ L+ ++ Q G HS
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHS 412
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G++Y WG N+ GQLG + I IP + ++ Q A G +A+T
Sbjct: 413 LALTNWGQVYSWGSNAVGQLGQETDTTRQI-IPRLIRSIAAKQVVQIAAGHYHCLALTNS 471
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G++ +WG+ G+LG G + + TP L++ L GV + A G HS + +
Sbjct: 472 GELYAWGSNAYGQLGLGMTNEKVS--------TPTLVQSLAGVPIAFIACGGNHSFAVSK 523
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG 313
+G ++ +G ++ + N + P+ + L V CG + LT+GG ++T G
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCG 583
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGG 368
+ G LG GS + P R+ S + Q++CG +HT A S GKI +G G
Sbjct: 584 AGTFGQLGHGSCNNEILP-RMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSG 639
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 24/265 (9%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTK 180
KE+ + + G H+ +T DG++Y G N +GQLG + +P P + L
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLG---HDVESLPNKRPQLLTALENYIIT 403
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
QA G S+A+T G+V SWG+ G+L GQE+ +T + PRLI+ + +V
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQL--GQETD------TTRQIIPRLIRSIAAKQV 455
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
AAG H + +G +Y +G A ++ L P+L+ L P + + CG
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIA-FIACG 514
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G H+ ++ G ++ WG N G LG+ ++ P +++ S V VSCG + +
Sbjct: 515 GNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFL 573
Query: 357 SE-GKILTWGWGGSHGTFSEDGHSS 380
+ G + T G GTF + GH S
Sbjct: 574 TAGGGVFTCG----AGTFGQLGHGS 594
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 18/234 (7%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+TVDGE G G++ A ++ +P K++ + +AA G ++ +T GK
Sbjct: 310 MTVDGENVECGP-IQGEV-FPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGK 367
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ S G G+LGH ES P+L+ LE + A G HS + G
Sbjct: 368 MYSCGNNDHGQLGHDVES--------LPNKRPQLLTALENYIITQACCGTAHSLALTNWG 419
Query: 258 RVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+VY +G AV + L QE + R+ P LI + + ++ G YH LT+ GELY WG
Sbjct: 420 QVYSWGSNAVGQ-LGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWG 478
Query: 314 SNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
SN G LG+G + + + +P VQ + P+ ++CG H+ A+S+ G I WG
Sbjct: 479 SNAYGQLGLGMTNEKVSTPTLVQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWG 531
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LGLG + E P + + + +ACGG H+ ++++G ++ G N FG
Sbjct: 477 WGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 536
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ S L LR G++ +S G S +T G ++ G + GQLG
Sbjct: 537 QLGLNDLNSRQFPTQLRTLRSLGVR----YVSCGDDFSVFLTAGGGVFTCGAGTFGQLGH 592
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
G ++ +P V L G Q A G ++A V GK+ +G G G+LG G
Sbjct: 593 GSCNNEI--LPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIG 646
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 156/303 (51%), Gaps = 20/303 (6%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
S+K +ACGG H++FL E G VY G N GQLG E G +P +I L + +V ++
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLG-HEREGN--KPEQIGALADQHIVHVAC 92
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A++ G+L+ WG S+GQLG + IP ++ L+ Q + G +
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+ +WG G+LG G+E S+ +P+ +K LEG+ + AAG HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKE--------FPSQASPQRVKSLEGIPLAQVAAGGAHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
+ +G V+ +G ++ + + P + KL +++VV CG HT VLT G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
++T+G+ G LG S++ +P RV S V Q++CG +HT A S G I +G
Sbjct: 263 GVFTFGAGSFGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321
Query: 366 WGG 368
G
Sbjct: 322 CGA 324
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG + P I
Sbjct: 75 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++++ Q+S G H A+ DG+ + WG+N +GQLGLGK+ P +V+ L GI
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E T +P +K L K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
HT S G +Y +G G LG G + P V+G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 25/284 (8%)
Query: 104 GISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
GIS N+ G EP + + + +++ G +HS + DGE+Y G N+ GQLG ++
Sbjct: 14 GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREG 73
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P ++ L+ A G S+A++ G++ SWGAG G+LGH
Sbjct: 74 NK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTED----- 124
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
S PRLIK+L + + G H + +G+ + +G ++ F
Sbjct: 125 ---SVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS 181
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+R + +P ++ V GG H+ L+ G ++ WG N G LG+ SP V+
Sbjct: 182 PQRVKSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-L 239
Query: 338 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
V +SCG +HTA +++ G + T+G G+F + GH S
Sbjct: 240 LRTQKVVYISCGEEHTAVLTKSGGVFTFG----AGSFGQLGHDS 279
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL R P + ++CG HT LT++G V+ G FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 334 CNVKCPSPVK 343
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 162/327 (49%), Gaps = 32/327 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + R SA + +K LA H + LTE G V++ G D+
Sbjct: 805 GEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY 864
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ++ G+ HS+ +T+DG+L+ +G G+LG G
Sbjct: 865 GKLG-HGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS 923
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
K IP +V L Q A G +V V+ V + G G G+LG G S+
Sbjct: 924 TTNK--KIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSA-- 979
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +P I+ L V +K + G +A + +G++++FG D+M GN
Sbjct: 980 -------KTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQ---DRMC---GNCE 1026
Query: 279 RR------PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
R P +++ L ++ G HT LTS G +YTWGSN +G LG+G + +
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS 357
P V+ S + Q+S G H+AA S
Sbjct: 1087 PTLVES-LSGKNIRQISAGRTHSAAWS 1112
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + +ACG H+ +T G ++ G D+G+
Sbjct: 859 WGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGR 918
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMW--GKNSNGQLGLGK 159
LG + P R+ L+ ++ Q++ G +H+ ++ D L +W G G+LG+G
Sbjct: 919 LGHGSTTNKKI-PERVMALENYIIGQVACGLNHTVIVSQDN-LTVWACGDGDYGKLGIGG 976
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+AK PTK+E LS + K+ + G + + A+T GK+ + G R+ E+
Sbjct: 977 TSAKT--SPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMF---GQDRMCGNCET---- 1027
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R++ + P+++ L + + G H+ + G VY +G ++ NH +
Sbjct: 1028 --RTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQ 1085
Query: 280 RPSLISKL 287
P+L+ L
Sbjct: 1086 EPTLVESL 1093
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 124/290 (42%), Gaps = 28/290 (9%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLR----ISGLKKEVVQISTGYHHSSAITVDGEL 144
T C ++ D I + S +PL + G+ +++V + ++
Sbjct: 693 TRCKFSQEFIDLFHEEIQLDSSISKDPLDNTQWVQGMDEQLVSWYEQCPNDWQCGTHCDV 752
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y++G +GQL + ++P TK S ++ G + + G VLS G G
Sbjct: 753 YLFGAGRHGQLA-EVGSGVLVPQLTK----SFHEARKVVCGQNCTFIINNNGVVLSCGEG 807
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFL---HSACIDENGRV 259
GRLG G S+ + RL I L+G VK A H+ + ENG V
Sbjct: 808 SYGRLGQGN-----------SDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEV 856
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD K+ + RRP I L E +V CG H+ V+T G+L+T+G +
Sbjct: 857 FSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDY 916
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
G LG GS PERV + QV+CG HT +S+ + W G
Sbjct: 917 GRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVSQDNLTVWACG 965
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 142/303 (46%), Gaps = 16/303 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G DYG+LG +R PV E H++ +ACG HTL E G V+A G N GQ
Sbjct: 58 FGLNDYGQLGHCRSRTRAEPV--DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQ 115
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ P + L K+VVQI+ G HS A+T GE+Y WG NS+GQLGLG
Sbjct: 116 LGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSG 175
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V+ L GI + G + S AVT G V WG G+LG G
Sbjct: 176 TPETK-PCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGD-------- 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T P +K L +V G H+A + +G V+ FG ++ + P
Sbjct: 227 -TTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLP 285
Query: 282 SLISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +L ++ CG HT S G +Y +G +G LG S ++SP+ V GP+
Sbjct: 286 RKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGPW 345
Query: 339 SES 341
S
Sbjct: 346 ETS 348
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 150/297 (50%), Gaps = 18/297 (6%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS 136
CG HT+ + + G +++ GLND+GQLG + + EP + GL+ + Q++ G H+
Sbjct: 41 CGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRA-EP--VDGLEAHNITQVACGAQHTL 97
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A GE++ WG NSNGQLGL + + ++P P V+ L+ Q A G S+A+T G
Sbjct: 98 AQNEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTNVG 156
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
++ WG+ G+LG G T E P L+K L+G+ + + G S + +
Sbjct: 157 EIYCWGSNSHGQLGLGSS--------GTPETKPCLVKLLQGIPISHISCGADFSFAVTPS 208
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
G VY +G + ++ + +P+ + L + + CG HT LT G ++T+G+
Sbjct: 209 GAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGA 268
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
G LG + P +V + V Q+ CG HT A S+G+I +G GGS
Sbjct: 269 GMYGQLGHCTSANEMLPRKVLELMGTT-VTQICCGRCHTLAFVPSKGRIYAFGLGGS 324
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L ++VQ+ G +H+ + DG+L+ +G N GQLG + + P V+ L
Sbjct: 32 LVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----VDGLEAHNIT 87
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G + ++A G+V +WG+ +G+LG E S++ TP+++K L +V
Sbjct: 88 QVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMP--------TPKMVKSLATKQV 139
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
A G HS + G +Y +G + ++ L G +P L+ L P S + CG
Sbjct: 140 VQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPIS-HISCG 198
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAA 355
+ +T G +Y WG N G LG+G D P+ Q V + CG HTAA
Sbjct: 199 ADFSFAVTPSGAVYGWGKNSFGQLGLG--DTTDRPQPTQLKSLRFQRVTYIRCGMDHTAA 256
Query: 356 IS-EGKILTWGWG 367
++ +G + T+G G
Sbjct: 257 LTRDGGVFTFGAG 269
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 19/250 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG+ +G+LGLG ++I P Q G ++ V GK+ S+G
Sbjct: 1 MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGL 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH RS + P + LE + A G H+ +E G V+ +G
Sbjct: 61 NDYGQLGH---------CRSRTRAEP--VDGLEAHNITQVACGAQHTLAQNEWGEVFAWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ L E + P ++ L + ++ CG H+ LT+ GE+Y WGSN +G L
Sbjct: 110 SNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQL 169
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
G+GS + + P+ +SCG + A++ + +GWG + +F + G
Sbjct: 170 GLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAV-YGWGKN--SFGQLG--L 224
Query: 381 GGQLDRGQLT 390
G DR Q T
Sbjct: 225 GDTTDRPQPT 234
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P + + + ++ +ACG +T+ +T+ G VY+ G ND
Sbjct: 4 WGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDH 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + G L ISG+ + + G H+ + G+L+ WG N GQLGL +
Sbjct: 64 GQLG--QEKGRKRLQL-ISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDR 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I P V+ L Q A G + S+A+T G++ +WG+ G+LG G ++ +
Sbjct: 121 VSA-TIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKM-- 177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+L+ L V + A G H+ I ++G V+ +G ++ + +
Sbjct: 178 ------ELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L S CG + LT G ++T G+ G LG G+ P ++
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIM-E 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 291 LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGA 324
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 16/298 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D+G+LG + R R + S + + + ACG +HTL + E G +++ G N GQL
Sbjct: 59 GNNDHGQLG--QEKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQL 116
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ EP + L K +VQI+ G HS A+T +GELY WG NS+GQLGLG
Sbjct: 117 GLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSD-T 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K+ P V L+ + A G ++ ++ G V +WG G+LG L ++
Sbjct: 176 KMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLG-------LSDIQ 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L +V AA G S + +G V+ G ++ P
Sbjct: 229 NRN--VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
I +L S ++ CG HT L S G +Y WG G LG +P+ V GP
Sbjct: 287 QIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFGP 344
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 15/226 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + I P +V +Q A G ++AVT G+V S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + L +LI ++ + + AA G H+ ++E G+++ +G
Sbjct: 61 NDHGQLGQEKGRKRL-----------QLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ L + R P ++ L ++ CG H+ LT+ GELY WGSN +G L
Sbjct: 110 SNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQL 169
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G+GS + ++ + P+ V+CG HT IS+ G + WG
Sbjct: 170 GLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWG 215
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL +++R P + ACG ++FLT G V+ G +GQ
Sbjct: 214 WGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 274 LGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 155/333 (46%), Gaps = 33/333 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G ++
Sbjct: 329 WGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 388
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 389 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 447
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P ++E L G+ T QAA G + AV GK+ +WG G
Sbjct: 448 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 505
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L+ A G + + G VY G
Sbjct: 506 GRLGHGDKESKL---------VPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGS-C 555
Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V L + P+ + KL S EE+ CG YH VLTS E++TWG NGCLG G
Sbjct: 556 VYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHG 615
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ ++P V+ + V ++CG TAAI
Sbjct: 616 DTNDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 647
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G E + VT G+V SWG GRLGHG +S +
Sbjct: 295 LPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP-------- 346
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI+ L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 347 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 405
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT V+TS G+L+T+G G LG G + P ++
Sbjct: 406 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLR 465
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V Q +CG HTAA+ E GK+ TWG G
Sbjct: 466 TV-QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 503
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G V+ +G + ++ + P LI L
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+ E V CG YHTC +T G+LYTWG + G LG G+ P+RV GP V
Sbjct: 356 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 415
Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 416 SISCGPWHTAVVTSSGQLFTFG----DGTFGVLGH 446
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 164/332 (49%), Gaps = 26/332 (7%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG LGLG +E P + +++ +ACG HT+ +T+ G V++ G ND
Sbjct: 31 WGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDS 90
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL + Q + G HS A+ G+L+ WG N++GQLGLG
Sbjct: 91 GQLG-HEKPTKRLQ--MIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGT 147
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L Q A G + ++A+T G++ +WG+ G+LG GQ+ I
Sbjct: 148 PLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKI-- 204
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+LI L + + A G HS + ++G V+ +G ++ + +
Sbjct: 205 ------ETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKY 258
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P L+ L + + V CG + LT G ++T G+ G LG G+ +S E +
Sbjct: 259 VPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGA----NSNEILPRQ 314
Query: 338 FSE---SPVDQVSCGWKHTAAI--SEGKILTW 364
E S V Q+SCG +HT A+ S GK+ W
Sbjct: 315 IIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 27/286 (9%)
Query: 92 VYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYM 146
+Y G +G+LG+ ENI L P + K V QI+ G H+ IT DGE++
Sbjct: 28 MYCWGSTVYGELGLGGIEDENI---LMPRELDFQKATAVEQIACGETHTVLITKDGEVFS 84
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G N +GQLG K ++ IP L KQAA G SVAV G++ WG+
Sbjct: 85 CGNNDSGQLGHEKPTKRLQMIPG----LDAFIFKQAACGASHSVAVNNWGQLFCWGSNAD 140
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G +I +TPR++K L V A G H+ + NG +Y +G +
Sbjct: 141 GQLGLGTPLTI--------AHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNS 192
Query: 267 VDKM-LFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L Q+ RP LI+ +P + + CGGYH+ V++ G ++ WG N G LG+
Sbjct: 193 DGQLGLGQDVKIETRPKLITGLATIPIAF-IACGGYHSIVVSKSGAVFGWGRNTFGQLGM 251
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
I + P ++ + V V+CG + + ++ +G + T G G
Sbjct: 252 NDISDKYVPCLLKT-LRNAKVKYVACGEEFSVFLTMDGGVFTCGAG 296
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 141/300 (47%), Gaps = 16/300 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D G+LG R + + + K ACG +H++ + G ++ G N GQL
Sbjct: 86 GNNDSGQLGHEKPTKRLQMI--PGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQL 143
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + + P + L VVQI+ G H+ A+T +GELY WG NS+GQLGLG+
Sbjct: 144 GLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDV- 202
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K+ P + L+ I A G S+ V+ G V WG G+LG S
Sbjct: 203 KIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISD------ 256
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+Y P L+K L KVK A G S + +G V+ G ++ ++ P
Sbjct: 257 ---KYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPR 313
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
I +L S ++ CG HT L S G++Y WG +G LG + + +P+ V GP+S
Sbjct: 314 QIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQMVLGPWS 373
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 17/252 (6%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
S K+ ++ T + I D +Y WG G+LGLG + I +P +++
Sbjct: 3 SAPKRLCIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATA 62
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+Q A G +V +T G+V S G SG+LGH + + L ++I L+
Sbjct: 63 VEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRL-----------QMIPGLDAF 111
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVC 295
K AA G HS ++ G+++ +G A ++ L A P ++ L S ++ C
Sbjct: 112 IFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIAC 171
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G HT LT+ GELY WGSN +G LG+G + + P+ + G + P+ ++CG H+
Sbjct: 172 GKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITG-LATIPIAFIACGGYHSI 230
Query: 355 AISE-GKILTWG 365
+S+ G + WG
Sbjct: 231 VVSKSGAVFGWG 242
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 129 bits (325), Expect = 2e-27, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 32/306 (10%)
Query: 86 LTETGCVYATGLNDFGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
LTE G VY G LGI + I L P ++ L +VV +S G+ H +A+
Sbjct: 764 LTENGDVYLWGRGAVKTPAVPILGIPQ-IEDQLLPFKLESLS-DVVSVSIGFCHGAAVRA 821
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+GEL WG NGQLG G ++ P ++ L+ + Q G + ++ +T GKV S
Sbjct: 822 NGELLTWGVGENGQLGHGDTNNQI--EPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYS 879
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WGA G+LG G T +P + LE V A+G H A + + V
Sbjct: 880 WGASEYGQLGLGD---------VTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVL 930
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+FG+ A + P+L+ L Y + + CG Y T +T G++YTWG+ +
Sbjct: 931 VFGNGAA----MGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE- 985
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
LG G SP+ ++ ++S + Q+SCG +HTA +++ G+I T G +F + G
Sbjct: 986 -LGHGGNSTETSPKLIEALRNQS-IRQISCGGRHTAFLTDSGRIFTCG----KDSFGQLG 1039
Query: 378 HSSGGQ 383
SG Q
Sbjct: 1040 QMSGDQ 1045
Score = 114 bits (286), Expect = 6e-23, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 22/264 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G ++ P + + + + CG HT+ LT+ G VY+ G +++GQ
Sbjct: 828 WGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +S P+++S L+K V+QI++G H + +T E+ ++G G A
Sbjct: 888 LGLGDVTQHS-SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN------GAAMGA 940
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A V+ +PT V L + + G + A+T G V +WG G LGHG S
Sbjct: 941 ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG--QELGHGGNS------ 992
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+E +P+LI+ L ++ + G H+A + ++GR++ G + ++ G+ +P
Sbjct: 993 ---TETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQ-NKP 1048
Query: 282 SLISKLPYSE--EVVCGGYHTCVL 303
I L + V CG + L
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVAL 1072
Score = 78.6 bits (192), Expect = 5e-12, Method: Composition-based stats.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 13/247 (5%)
Query: 134 HSSAITVDGE--LYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSV 190
H SAI +D L WG SN +LG A + P P ++ + + G S
Sbjct: 703 HRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSS 762
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G V WG G ILG + + P ++ L V V ++ GF H
Sbjct: 763 VLTENGDVYLWGRGAV----KTPAVPILGIPQIEDQLLPFKLESLSDV-VSVSI-GFCHG 816
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
A + NG + +G ++ + N+ P +I L + +V CG HT LT G+
Sbjct: 817 AAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGK 876
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWG 367
+Y+WG++E G LG+G + SP +V + V Q++ G H A ++ K +L +G G
Sbjct: 877 VYSWGASEYGQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935
Query: 368 GSHGTFS 374
+ G S
Sbjct: 936 AAMGAAS 942
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG GS R PV + + A+A G H+L L G V+A G ND+GQ
Sbjct: 194 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 251
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S P+ + GL +VV ++ G HS A+ DG ++ WG N GQLG
Sbjct: 252 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 309
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + A GF S+AV GG + SWG SG+LG+G SS
Sbjct: 310 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 359
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L V AAG +HS + +G V+ +G ++ + P
Sbjct: 360 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ L V G YH+ + +GG L+ WG N+ G LG ++ P
Sbjct: 415 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 463
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 23/324 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ +R P + A+A GG+H L L G V+A G N +GQL
Sbjct: 145 GSNSAGQLGNGTTAARSAPRPVPGLSR--AVAVAAGGSHALALCADGTVWAWGNNGYGQL 202
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + + + P+++ GL+ VV ++ GY HS A+ DG ++ WG N GQLG G
Sbjct: 203 G-NGSTAHRATPVQVPGLQG-VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHS 260
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P+P V LS + + AA GF S+A+ G V +WG G G+LG S
Sbjct: 261 PTPVP--VPGLSQVVSV-AAGGFH-SLALCADGTVWAWGNNGFGQLGEAV---------S 307
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T P ++ L +V A GF HS + G ++ +G+ ++ + + RP+
Sbjct: 308 TQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAP 365
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
+ L V GG H+ + + G ++ WG NE G LG +P RV G E
Sbjct: 366 VQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV-- 423
Query: 344 DQVSCGWKHTAAISEGKILTWGWG 367
V+ G+ H+ ++ G L W WG
Sbjct: 424 -AVAAGFYHSLSVQAGGSL-WAWG 445
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 147/309 (47%), Gaps = 21/309 (6%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S+ R A ++ ++A+A G ++L L G V+A G N GQLG S P
Sbjct: 107 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 165
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+ GL + V ++ G H+ A+ DG ++ WG N GQLG G A + P+ +V L G+
Sbjct: 166 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 222
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
A G+ S+A+ G V +WG G+LG+G + TP + L
Sbjct: 223 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 271
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
V V +AA GF HS + +G V+ +G+ ++ +P + L V G
Sbjct: 272 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 329
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
YH+ + +GG L++WG+N +G LG GS P VQG V V+ G H+ A+
Sbjct: 330 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG---LGAVTSVAAGGMHSVAVQ 386
Query: 357 SEGKILTWG 365
++G + WG
Sbjct: 387 ADGTVWAWG 395
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG GS R PV + + A+A G H+L L G V+A G ND+GQ
Sbjct: 197 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 254
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S P+ + GL +VV ++ G HS A+ DG ++ WG N GQLG
Sbjct: 255 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 312
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + A GF S+AV GG + SWG SG+LG+G SS
Sbjct: 313 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 362
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L V AAG +HS + +G V+ +G ++ + P
Sbjct: 363 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ L V G YH+ + +GG L+ WG N+ G LG ++ P
Sbjct: 418 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 466
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 23/324 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ +R P + A+A GG+H L L G V+A G N +GQL
Sbjct: 148 GSNSAGQLGNGTTAARSAPRPVPGLSR--AVAVAAGGSHALALCADGTVWAWGNNGYGQL 205
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + + + P+++ GL+ VV ++ GY HS A+ DG ++ WG N GQLG G
Sbjct: 206 G-NGSTAHRATPVQVPGLQG-VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHS 263
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P+P V LS + + AA GF S+A+ G V +WG G G+LG S
Sbjct: 264 PTPVP--VPGLSQVVSV-AAGGFH-SLALCADGTVWAWGNNGFGQLGEAV---------S 310
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T P ++ L +V A GF HS + G ++ +G+ ++ + + RP+
Sbjct: 311 TQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAP 368
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
+ L V GG H+ + + G ++ WG NE G LG +P RV G E
Sbjct: 369 VQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGEV-- 426
Query: 344 DQVSCGWKHTAAISEGKILTWGWG 367
V+ G+ H+ ++ G L W WG
Sbjct: 427 -AVAAGFYHSLSVQAGGSL-WAWG 448
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 147/309 (47%), Gaps = 21/309 (6%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S+ R A ++ ++A+A G ++L L G V+A G N GQLG S P
Sbjct: 110 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 168
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+ GL + V ++ G H+ A+ DG ++ WG N GQLG G A + P+ +V L G+
Sbjct: 169 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 225
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
A G+ S+A+ G V +WG G+LG+G + TP + L
Sbjct: 226 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 274
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
V V +AA GF HS + +G V+ +G+ ++ +P + L V G
Sbjct: 275 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 332
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
YH+ + +GG L++WG+N +G LG GS P VQG V V+ G H+ A+
Sbjct: 333 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG---LGAVTSVAAGGMHSVAVQ 389
Query: 357 SEGKILTWG 365
++G + WG
Sbjct: 390 ADGTVWAWG 398
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 163/334 (48%), Gaps = 26/334 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-----FEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG Y G S +P++ + S+K +ACGG H++FL E G VY G+
Sbjct: 63 WG---YWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGV 119
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG E G +P +I L + ++ ++ G HS A++ G L+ WG S+GQLG
Sbjct: 120 NTKGQLG-HEKEGS--KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLG 176
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L V +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 177 LTTTEDSV-AVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFP 235
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ +P+ +K L+G+ + AAG HS + +G V+ +G ++ +
Sbjct: 236 --------SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ 287
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P + KL +++VV CG HT VLT G ++T+G+ G LG S + +P R
Sbjct: 288 DRESPCHV-KLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRR 346
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
V S V Q++CG +HT A L + +G
Sbjct: 347 VLE-LMGSEVSQIACGRQHTLAFVPSSGLIYAFG 379
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 16/298 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG++ P I
Sbjct: 133 KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKK 192
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L +E++ Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V+ L GI
Sbjct: 193 LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQAS-PQRVKSLDGIPL 251
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG SG+LG E +P +K L K
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ---------DRESPCHVKLLRTQK 302
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + + G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 303 VVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGR 362
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS--ESPVDQVSCGWKH 352
HT S G +Y +G G LG G L P V+G ++ PV + + KH
Sbjct: 363 QHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKH 420
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 17/228 (7%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++ WG S G G +I P + K+ A G S+ + G+V + G
Sbjct: 59 KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGH +E S P I L + A G HS + + GR++ +
Sbjct: 119 VNTKGQLGHEKEGS-----------KPEQIGALADQHIIHVACGESHSLALSDQGRLFSW 167
Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
G + ++ L + P LI KL +V CG +H L + G+ + WG N +G
Sbjct: 168 GAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQ 227
Query: 320 LGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
LG+G SP+RV+ P+ QV+ G H+ A+S G + WG
Sbjct: 228 LGLGKEFPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWG 274
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+TG V+ G GQ
Sbjct: 273 WGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQ 332
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG ++ + P R+ L EV QI+ G H+ A + G +Y +G GQLG G
Sbjct: 333 LG-HDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHT 391
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 392 CNLKCPSPVK 401
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 156/305 (51%), Gaps = 20/305 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G +++ G N GQLG + + P RI L V +S G
Sbjct: 25 LRQAASGERHSLLLLSNGELHSCGDNSQGQLG-RKGVQRDEHPKRIRTLDNLRVDLVSCG 83
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ IPTK++ L+GI Q + G S+A
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGVGE-FKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ GG+V SWG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 143 LSEGGQVFSWGSNSHGQLGLGKECP--------SQASPQRVRSLDGIPLTQVAAGGAHSF 194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
+ +G + +G ++ ++ N + +P I L + CG HT VLT
Sbjct: 195 ALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQT 254
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTW 364
G+++T+G N G LG P+ V+G + V Q+ CG HT A + GK++++
Sbjct: 255 GKVFTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GRGPS 317
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 134/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG ++ P + + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ E +L P +I L +++Q+S G++HS A++ G+++ WG NS+GQLGLGK+
Sbjct: 108 GVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L Q +
Sbjct: 168 SQAS-PQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNV------ 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ PR I L+ + V + G+ H+A + + G+V+ FG + ++ P
Sbjct: 221 PVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + ++ CG YHT + + G++ ++G
Sbjct: 281 LVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 135/275 (49%), Gaps = 24/275 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +GEL+ G NS GQ LG+K + P ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQ--LGRKGVQRDEHPKRIRTLDNLRVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I P IK L G+K+
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEI--------NLIPTKIKTLTGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + E G+V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLT-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ L+ G + WGSN G L + +V H P + G V +SCG++HTA +
Sbjct: 193 SFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSI-GALKNLGVIYISCGYEHTAVL 251
Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
++ GK+ T+G G S+G GHS + + QL
Sbjct: 252 TQTGKVFTFG-GNSYGQL---GHSPTAEKEGPQLV 282
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P + ++CG H+L L+E G V++
Sbjct: 95 RVFA--WGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 153 GSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + +P+ P + L + + G+E + +T GKV ++G G+LG
Sbjct: 213 LALRQNN---VPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
H + G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 HSPTAEKEG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLG S+ P + + L +A GGAH+ L+ +G + G N+ G
Sbjct: 152 WGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAG 211
Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL + +N S +P I LK V+ IS GY H++ +T G+++ +G NS GQLG
Sbjct: 212 QLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
A K P VE + G+ ++ + V GKV+S+G G S
Sbjct: 272 PTAEK--EGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFGRGPS 317
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 160/334 (47%), Gaps = 24/334 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P +C + + + A+ GG TLF +T+ G VYA+G G
Sbjct: 3839 WGHNHRGQLGGIEGNKVKSPRLCESLSELN-PAMITGGEQTLFAVTDDGKVYASGYAAHG 3897
Query: 102 QLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S+N+ L L G+ + + I +G H A+T GELY WG+ +G+LGL
Sbjct: 3898 RLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGL 3957
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + +P +E L A G S +T G + +WG G GRLGH +
Sbjct: 3958 GTTVN--MNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHET- 4014
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
++ P+L+ L+G +V A +G + C +G V+ +GD K L + G
Sbjct: 4015 --------QHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGK-LGRGG 4065
Query: 276 NH-ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
N ++ P I L + +++CG + LT+ G +YTWG + LG G +P
Sbjct: 4066 NEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPR 4125
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
RV G + V + CG H +E GK+ +WG
Sbjct: 4126 RVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWG 4159
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 163/338 (48%), Gaps = 22/338 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG D +LG E++ + P+ + A G + +++ G V+A G
Sbjct: 2928 VWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSS 2987
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI + P +IS L VV+ +S H A+T DG+++ WG GQLG
Sbjct: 2988 GRLGIGGFANIRM-PHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH 3046
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E ++ + G S AV+ G++ +WG G GRLGHG
Sbjct: 3047 G--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGD---- 3100
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGN 276
S ++ P+L++ LE V++ A G ++ + + ++ +GD + K+ ++G+
Sbjct: 3101 -----SNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGS 3155
Query: 277 HARR-PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ P + P + ++ CG + + +LT G++YTWG E LG S V P V
Sbjct: 3156 SSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLV 3215
Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G S++ + QV+ G H A+ S G++ +WG HG
Sbjct: 3216 DGLASKT-ITQVAVGALHCLALTSSGEVYSWG-DNEHG 3251
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 143/323 (44%), Gaps = 25/323 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYATGLND 99
G +GRLG+GS ++ P ++ + A+ GG H L +T G +YA G +
Sbjct: 3892 GYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGE 3951
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG+ + ++ P I LK K V+ G HS+ IT DG LY WGK G+LG
Sbjct: 3952 DGKLGLGTTVNMNV-PHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHN 4010
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGH-GQES 215
+ P V L G A G Q++ T G V SWG G G+LG G E
Sbjct: 4011 DHETQ--HKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEG 4068
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S P+ I L G V G S + G VY +G ++ +
Sbjct: 4069 S----------KVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD 4118
Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+H R P + L E V+ CG H V T G++++WG N+ G +G + + P+
Sbjct: 4119 SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPK 4178
Query: 333 RVQGPFSESPVDQVSCGWKHTAA 355
R+ +D V+CG H+ A
Sbjct: 4179 RI-NITDNICIDHVACGSAHSIA 4200
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 17/325 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G + P S+ + ++ A++C G H L +T G V++ G +G
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYG 3042
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG Y + K + ++S G HS+A++V+GEL+ WG+ ++G+LG G
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSN 3102
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILGF 220
+ P V L + A G + + G L +WG G G+LG SS
Sbjct: 3103 NQTKP--KLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSS---- 3156
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P + ++I G S + + G+VY +G ++ +
Sbjct: 3157 ----STDVPVQVITFPSNIIQIEC-GMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPI 3211
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P+L+ L +V G H LTS GE+Y+WG NE+G G S P+ V
Sbjct: 3212 PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIV-ASL 3270
Query: 339 SESPVDQVSCGWKHTAAISEGKILT 363
+ +++CG H+ A ++G + T
Sbjct: 3271 KGHRICKIACGSSHSIAFAQGSLTT 3295
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 27/287 (9%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
V+ GLND QLG + P+ L + +Q + G S ++ DG+++ G+
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGR 208
S+G+LG+G A I +P ++ LS ++ A+ +AVT GKV SWG G G+
Sbjct: 2986 SSGRLGIGGFAN--IRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S+ + R P++I+ + ++ + G HSA + NG ++ +G A
Sbjct: 3044 LGHG---SLQSYDR------PKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADG 3094
Query: 269 KMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSG-GELYTWGSNENGCLGI--- 322
++ + N+ +P L+ L V CG + L +G L+ WG G LG+
Sbjct: 3095 RLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDG 3154
Query: 323 -GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
S DV VQ S + Q+ CG + ++ EGK+ TWG G
Sbjct: 3155 SSSTDV-----PVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKG 3196
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 23/265 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H L LT+ G VY+ G G LGI N P ++ L +V IS G HS+A+
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIG-NTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
T DG LY WGK S G+LG G K+ IPT VE L+G+ Q G ++A+ G
Sbjct: 576 TEDGVLYTWGKGSYGRLGHGNAEDKL--IPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633
Query: 197 KVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G G+LG G + + + S T ++K + G ++ +A + +
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMA---------LTK 684
Query: 256 NGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
+G++Y +G D GN H R+P LI L + +V G H LT+ ++Y
Sbjct: 685 DGKLYSWG--CGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYA 742
Query: 312 WGSNENGCLGIGSIDVLHSPERVQG 336
WG N + + S D++ SP ++
Sbjct: 743 WGKNSSFEVN-ESGDIISSPLMIEA 766
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 26/273 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G YG+LG GSL+S RP + F+ ++ ++CG H+ ++ G ++ G G+
Sbjct: 3036 WGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGR 3095
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
LG ++ + +P + L+K + ++ G ++ + D L+ WG S G+LGL K
Sbjct: 3096 LGHGDSNNQT-KPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGL-KD 3153
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P +V S I + + F SV +T GKV +WG G RLG+ S
Sbjct: 3154 GSSSTDVPVQVITFPSNIIQIECGMHF--SVLLTKEGKVYTWGKGEYYRLGNDSTS---- 3207
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
+ P L+ L + A G LH + +G VY +GD Q+GN++
Sbjct: 3208 -----VQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHG----QQGNNST 3258
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTSG 306
R+P +++ L ++ CG H+ G
Sbjct: 3259 ICNRKPQIVASLKGHRICKIACGSSHSIAFAQG 3291
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G LG+G+ ES+ P +A + ++ G H+ +TE G +Y G +G+
Sbjct: 532 WGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGR 591
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N L P + GL ++VQ+ +G H+ A+ G+++ WG G+LG
Sbjct: 592 LG-HGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPG 650
Query: 160 KAAKVIPIPTKVECLSGIFTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+P P +SGI + + G + S+A+T GK+ SWG G + +LGHG +
Sbjct: 651 SDQNKVPKP-----ISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQE 705
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+LI+ L V + G H + + VY +G
Sbjct: 706 HV---------RQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG+ + P + + + + CG +H+ +T+ G +Y G +G+
Sbjct: 3947 WGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGR 4006
Query: 103 LGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-G 158
LG +++ +P +S LK E V +G + T G ++ WG G+LG G
Sbjct: 4007 LGHNDH-ETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGG 4065
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +KV P K++ L+G + G + S+A+T G V +WG G RLGHG +S
Sbjct: 4066 NEGSKV---PKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDS--- 4119
Query: 219 GFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+ TP R++ L V G LH E+G+V+ +GD
Sbjct: 4120 ------HQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGD 4160
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 17/245 (6%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++++WG N QLG AKV P + L+ + Q A G + S V+ GKV +
Sbjct: 2924 NKVFVWGLNDMRQLGTDLSEAKV-KSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982
Query: 202 GAGGSGRLGHGQESSIL--GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G G SGRLG G ++I + S S Y R KV ++ AG H + +G+V
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVR--------KVAVSCAG-RHVLAVTADGKV 3033
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD ++ RP +I + + EV CG H+ ++ GEL+TWG +
Sbjct: 3034 FSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGAD 3093
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFS-E 375
G LG G + P+ V+ + + V+CG ++ ++ G W WG GS G +
Sbjct: 3094 GRLGHGDSNNQTKPKLVRA-LEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLK 3152
Query: 376 DGHSS 380
DG SS
Sbjct: 3153 DGSSS 3157
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T GKV SWG G +G LG G + S+ P + L G ++ +AG +H
Sbjct: 521 LALTKDGKVYSWGQGSNGVLGIGN---------TESQTAPTAVAALSGDRIVHISAGSMH 571
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTS 305
SA + E+G +Y +G + ++ P+++ L + +V CG HT L
Sbjct: 572 SAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD 631
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
G++++WG + G LG D P+ + G S SPV ++ CG + + A++ +GK+ +W
Sbjct: 632 TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSW 691
Query: 365 GWGGSH 370
G G ++
Sbjct: 692 GCGDTY 697
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G E P + KH +K L CG ++ LT G VY G D+
Sbjct: 4053 WGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIK-LLCGSQFSMALTTAGHVYTWGKGDYY 4111
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG ++ + P R+ GL + V+ I G H T G+++ WG N GQ +G
Sbjct: 4112 RLGHGDD-SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQ--IGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+ + +P ++ I A G S+A + + LS
Sbjct: 4169 DTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRNLS 4209
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG N GQLG G + KV P E LS + G + AVT GKV + G
Sbjct: 3836 VFGWGHNHRGQLG-GIEGNKV-KSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGY 3893
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
GRLG G ++ + TP G+ VK A +G H + G +Y
Sbjct: 3894 AAHGRLGIGSSDNV-------ATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYA 3946
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
+G+ K+ + P LI L S+ V+ CG H+ +T G LYTWG G
Sbjct: 3947 WGEGEDGKLGLGTTVNMNVPHLIESL-KSKHVIDAGCGSSHSACITDDGSLYTWGKGRYG 4005
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCG---WKHTAAISEGKILTWGWG 367
LG + H P+ V E V V+CG + A + G + +WG G
Sbjct: 4006 RLGHNDHETQHKPKLVSALKGEQ-VTCVACGSGDAQTLCATASGCVFSWGDG 4056
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V WG G+LG + + + +PRL + L + + G + ++G
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKV---------KSPRLCESLSELNPAMITGGEQTLFAVTDDG 3886
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYT 311
+VY G A ++ ++ P+ ++ L V GG H +T+ GELY
Sbjct: 3887 KVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYA 3946
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
WG E+G LG+G+ ++ P ++ S+ +D CG H+A I+ +G + TWG G +
Sbjct: 3947 WGEGEDGKLGLGTTVNMNVPHLIESLKSKHVID-AGCGSSHSACITDDGSLYTWG-KGRY 4004
Query: 371 GTFSEDGHSS 380
G + H +
Sbjct: 4005 GRLGHNDHET 4014
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 225 SEYTPRLIKELEGVKVKIAAAGFL----HSACIDENGRVYI-----FGDRAVDKMLFQEG 275
SE P +I + + ++I A F H + +G V+ GD V+++ F
Sbjct: 447 SEGGPSII-QTSNILLEIGAKEFYSSPKHRVVLTVHGTVFYVMDASMGDFTVEQLFF--- 502
Query: 276 NHARRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P EE++ G H LT G++Y+WG NG LGIG+ + +
Sbjct: 503 ------------PGDEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTA 550
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWG 367
P V S + +S G H+AA++E +L TWG G
Sbjct: 551 PTAVAA-LSGDRIVHISAGSMHSAAVTEDGVLYTWGKG 587
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 154/334 (46%), Gaps = 30/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 287 WGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNA 346
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG V +S G H++ IT G+LY +G + G LG G
Sbjct: 347 GLLGHGSNVSHWI-PKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 405
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+A+ P +VE L G+ T + G + AV GK+ +WG G RL
Sbjct: 406 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 463
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L AA G + + +G ++ G V
Sbjct: 464 GHGDRSSKL---------KPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-PVYG 513
Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L N R P L+ + EV CG YH VLT+ GE+YTWG NG LG G I
Sbjct: 514 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIA 573
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
P V+ + V +V+CG TAAI + K
Sbjct: 574 DRKVPTLVEA-LKDRSVKRVACGSSFTAAICQHK 606
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 119/253 (47%), Gaps = 35/253 (13%)
Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G + A + +P +E + A G + + VT
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +G T+ + PRL++ L V++ A G H+ +
Sbjct: 280 RQAEVFTWGEECSGRLGHG-----IG----TNVFQPRLVESLSTCNVELIACGEFHTCAV 330
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S LP S V CG +HT ++TS G
Sbjct: 331 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-AVSCGTWHTALITSSG 389
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+LYT+G G LG G+ P+ V+ + VSCG HTAA+ E
Sbjct: 390 QLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIISQSNAS 448
Query: 359 -GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 449 SGKLFTWGDGDKY 461
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P+ ++ + V A G H+A + V+ +G+ ++ G + +P
Sbjct: 248 TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPR 307
Query: 283 LISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGP 337
L+ L E + CG +HTC +T+ G+LYTWG ++ G LG GS +V H P+RV GP
Sbjct: 308 LVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS-NVSHWIPKRVSGP 366
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
PV VSCG HTA I S G++ T+G GTF GH
Sbjct: 367 LDGLPVSAVSCGTWHTALITSSGQLYTFG----DGTFGVLGH 404
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V ++ G H++ +T E++ WG+ +G+LG G + P VE
Sbjct: 255 KPLE-SNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHG--IGTNVFQPRLVES 311
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + A G + AVT G + +WG G +G LGHG + S + P+
Sbjct: 312 LSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS---------NVSHWIPKR 362
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISKLP 288
+ L+G+ V + G H+A I +G++Y FGD + GN A P + L
Sbjct: 363 VSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFG--VLGHGNRASCSYPKEVESLK 420
Query: 289 --YSEEVVCGGYHTCVLT---------SGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 421 GLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHG 466
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ P +V+ + V ++CG TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 418
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T + + GK+L+ G
Sbjct: 296 LIDYDFYRVACGHSLTVCLTTSGKVLSMG 324
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+RST + L K LE + V G H+A + NG V+ +G+ + ++
Sbjct: 56 IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
+ P L+ L + V CG +HTC +T+ GELYTWG ++ G LG G+ D H P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+R+ G PV VSCG HTA I S G++ T+G G
Sbjct: 175 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG 211
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 153/319 (47%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2907
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +I +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 2908 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 2966
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2967 ATQ--SKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3019
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3020 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3075
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3076 RKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVH- 3134
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 3135 ELDDARVNRVSCGSSHSIA 3153
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 3902 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 3961
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L A G Q++ VT V SWG G G+LG G
Sbjct: 3962 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4013
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4014 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4070
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H T GE++TWG N+ G LG G+ L P V
Sbjct: 4071 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4129
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4130 LQGKKITRVACGSAHTLAWSTMK 4152
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 163/354 (46%), Gaps = 27/354 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3789 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3847
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3848 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 3905
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 3906 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 3959
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+LI+ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 3960 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4014
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ D + P +
Sbjct: 4015 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4074
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
V + ++ G H A ++ G++ TWG G DG +S Q R
Sbjct: 4075 VAA-LQGKKIISIATGSLHCVACTDKGEVFTWG-DNDEGQLG-DGTTSALQRPR 4125
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 2901 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 2960
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S L S + + V+QI+ G + A+T DG +Y WG G+LG G
Sbjct: 2961 LGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGS 3020
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3021 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3075
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3076 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHG----QQGNGTTI 3125
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3126 VNKKPSLVHELDDARVNRVSCGSSHS 3151
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 45/296 (15%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
VY GLND QLG + + L+P+ I+G K + +S +
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQ----------E 2841
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG + P P + LS K+ A+ G + ++A+T GKV
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG S S PRLI+ L+ +++ A G HSA I +G +
Sbjct: 2900 SWGEGEDGKLGHGN---------SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L ++ CG T LT+ G +Y+WG
Sbjct: 2951 YTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDG 3010
Query: 316 ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ G LG G D ++P +R+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKG 3062
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 3895 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 3954
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P I L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 3955 LGHGDSED-QLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4012
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4013 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4069
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4070 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4122
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4123 RPRLVHALQGKKITRVACGSAHT 4145
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 165/346 (47%), Gaps = 26/346 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
Q +WG D +LG G S+ + PV K +A GG+ TLF+ ++ G +Y
Sbjct: 2788 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2845
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
A G G+LG+ ++ EP I L + V++ + +G H+ A+T DG+++ WG+
Sbjct: 2846 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG 2904
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+LG G + + P +E L + A G S A+T G++ +WG G GRLG
Sbjct: 2905 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 2962
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
HG + ++ P+L++ L G +V A G + + +G VY +GD
Sbjct: 2963 HGD---------TATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFG 3013
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
K+ + P LI +L ++ CG + LT GE++TWG + LG G+
Sbjct: 3014 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3073
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ P V+G + V+ G H A+++ G++ WG HG
Sbjct: 3074 HVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDIGQVYAWG-DNDHG 3117
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 24/279 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
G H L LT+ VY+ G + G+LG N+ + EP I L +K + I+ G +S+A+
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLG-HGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL 569
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG---FEQSVAVTGG 195
+ +GELY WG+ + G+LG G V+ IPT V L+G A G Q++ VT
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVM-IPTLVTALNGHMVVYVACGGGRDPQTLCVTAS 628
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G G+LG G TP+++ +L + V G SA +
Sbjct: 629 GIVFSWGDGNHGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA 679
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
G VY +G K+ +H R P +I L +++ G H LT +Y WG
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739
Query: 314 SNENGCL--GIGSIDVLHSPERVQGP-FSESPVDQVSCG 349
N++G + +G+I PE P FS V ++CG
Sbjct: 740 RNDHGQIDPALGTI----VPEPTLCPTFSGKNVIGLACG 774
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3842
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3843 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 3900
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 3901 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
++ + P LI L + +V CG T +T +++WG + G LG
Sbjct: 3952 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4011
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4012 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH 4059
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 115/239 (48%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +P E LS + Q G + AVT GKV +
Sbjct: 3784 GAIYGWGHNHRGQLG-GLEGAKV-KLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 3841
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S++ P L++ ++ V VK A +G H + G V
Sbjct: 3842 GYGAVGRLGIGGTDSVM---------VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP LI +L +E ++ CGG+H+ +TS G LYTWG
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G + +P+ ++ + V V+CG T +++ + W WG G +G
Sbjct: 3953 GRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWGDGDYGKL 4009
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y+WG N QLG G K +K I +P E LS + A G + V+ GK+ + G
Sbjct: 2792 VYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2849
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G +S++ P+ I L +K A +G H+ + ++G+V+
Sbjct: 2850 GTNGRLGLGDDSNVC---------EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFS 2900
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P LI L ++ CG H+ +TS GELYTWG E G
Sbjct: 2901 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 2960
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG--GSHGTFS 374
LG G P+ VQ + V Q++CG + A ++G + +WG G G G
Sbjct: 2961 LGHGDTATQSKPKLVQSLVGQR-VIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3019
Query: 375 EDGHSSGGQLDR 386
DG + +DR
Sbjct: 3020 SDGCYTPLLIDR 3031
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ GRLG G++ P + A + ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 526 WGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGK 585
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTG---YHHSSAITVDGELYMWGKNSNGQLGL- 157
LG + + P ++ L VV ++ G + +T G ++ WG ++G+LG
Sbjct: 586 LGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRG 645
Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G K K+ V+ L I + G + S A+T G+V +WG G +LGHG E
Sbjct: 646 GCDGSKTPKI------VDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE 699
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
+ P++I L+ K+K G LH + E+ VY
Sbjct: 700 DHV---------RYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVY 736
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG G E + + P L + L ++ G +
Sbjct: 3782 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 3832
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+VY G AV ++ + P+L+ + + V GG H L+S G +
Sbjct: 3833 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
Y+WG ++G LG G+ P+ ++ VD ++CG H+AAI S G + TWG
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWG--- 3948
Query: 369 SHGTFSEDGHSSGGQLDRGQLTP 391
G + GH QLTP
Sbjct: 3949 -KGRYGRLGHGDS----EDQLTP 3966
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4053 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4112
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4113 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4147
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ +LG G+ + P + + +K L G H L LTE VY G ND GQ
Sbjct: 686 WGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQ 745
Query: 103 L 103
+
Sbjct: 746 I 746
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 164/334 (49%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG LE P +F + +ACG HTLF+ + G V + G ND+
Sbjct: 14 WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P I L ++ V+Q S+G HS+ +T G+++ WG N + QLG G+
Sbjct: 74 GQLGHEKPCK---RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ 130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP V L+ Q A G +V +T G++ +WG+ HGQ LG
Sbjct: 131 VDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSN-----NHGQ----LG 181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T + P+ + + G+ + AAG H+ + +G ++ +G + ++ +
Sbjct: 182 LANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L+ L + CG H+ LT G ++T+G+ G LG + + P +V
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKV-FE 300
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q++CG KH+ A S G++ +G GG+
Sbjct: 301 LMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGN 334
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 18/300 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + RP + + + ++ + G H+ LT+ G V+ G N+ QL
Sbjct: 69 GNNDYGQLG--HEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQL 126
Query: 104 GISENIGYSLE-PLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + S P + GL +VVQ++ G H+ +T G++Y WG N++GQLGL K
Sbjct: 127 GRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKT 186
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V C+SG+ + A G + ++ +T G + +WG G+LG G +
Sbjct: 187 PQ--NEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQD----- 239
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P L+K L + A G HS + +G V+ FG ++ N+ P
Sbjct: 240 ----RGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLP 295
Query: 282 SLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +L S ++ CG H+ + S G +Y +G NG LG GS SP V+GPF
Sbjct: 296 RKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKGPF 355
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4071 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4130
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L A G Q++ VT V SWG G G+LG G
Sbjct: 4131 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4183 ---SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4239
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H T GE++TWG N+ G LG G+ L P V
Sbjct: 4240 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4298
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4299 LQGKKITRVACGSAHTLAWSTMK 4321
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 153/319 (47%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K ++ GG H L LT+ G V++ G + G
Sbjct: 2992 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDG 3051
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +I +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3052 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3110
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3111 ATQ--SKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3163
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3164 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3219
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3220 RKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE 3279
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 3280 -LDDARVNRVSCGSSHSIA 3297
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 163/354 (46%), Gaps = 27/354 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3958 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 4016
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 4017 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4074
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4075 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4128
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+LI+ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4129 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4183
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ D + P +
Sbjct: 4184 DGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4243
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
V + ++ G H A ++ G++ TWG G DG +S Q R
Sbjct: 4244 VAA-LQGKKIISIATGSLHCVACTDKGEVFTWG-DNDEGQLG-DGTTSALQRPR 4294
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3045 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S L S + + ++QI+ G + A+T DG +Y WG G+LG G
Sbjct: 3105 LGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGS 3164
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3165 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3219
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN
Sbjct: 3220 ------RKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHG----QQGNGTTI 3269
Query: 279 --RRPSLISKLPYSE--EVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3270 VNKKPSLVHELDDARVNRVSCGSSHS 3295
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4064 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4123
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P I L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4124 LGHGDSED-QLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4182 -GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4239 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4291
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4292 RPRLVHALQGKKITRVACGSAHT 4314
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 165/346 (47%), Gaps = 26/346 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
Q +WG D +LG G S+ + PV K +A GG+ TLF+ ++ G +Y
Sbjct: 2932 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2989
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
A G G+LG+ ++ EP I L + V++ + +G H+ A+T DG+++ WG+
Sbjct: 2990 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEG 3048
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+LG G + + P +E L + A G S A+T G++ +WG G GRLG
Sbjct: 3049 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 3106
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
HG + ++ P+L++ L G ++ A G + + +G VY +GD
Sbjct: 3107 HGD---------TATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFG 3157
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
K+ + P LI +L ++ CG + LT GE++TWG + LG G+
Sbjct: 3158 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3217
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ P V+G V V+ G H A+++ G++ WG HG
Sbjct: 3218 HVRKPTLVEG-LRGKKVIHVAVGALHCLAVTDIGQVYAWG-DNDHG 3261
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 142/316 (44%), Gaps = 28/316 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+ +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 451 SPFYYDTIAELGIKQLCCT-------ERALMILSVNGNVYMMYYGS-ETQY-PQRVYGFS 501
Query: 70 KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVV 126
+ + +A G H L LT+ VY+ G D G+LG + Y EP I L +K +
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYD-EPKLIEALVEKNIT 560
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
I+ G +S+A++ +GELY WG+ + G+LG G + + IPT V L+G A G
Sbjct: 561 FIACGSTYSAALSSNGELYTWGRGNYGRLGHGN--SDNVMIPTLVTALNGHMVVYVACGS 618
Query: 187 --EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
Q++ VT G V SWG G G+LG G TP+++ +L + V
Sbjct: 619 GDSQTLCVTASGIVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVY 669
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCV 302
G SA + G VY +G ++ +H R P +I K +E+ G H
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLA 729
Query: 303 LTSGGELYTWGSNENG 318
LT +Y WG N+ G
Sbjct: 730 LTEDQLIYGWGRNDYG 745
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 4011
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4012 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4069
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4070 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
++ + P LI L + +V CG T +T +++WG + G LG
Sbjct: 4121 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4180
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4181 GGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYH 4228
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 31/302 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG 131
+K L C + L+ G VY Q P R+ G +K ++ I++
Sbjct: 463 IKQLCCTERALMILSVNGNVYMMYYGSETQY-----------PQRVYGFSEKPIIMIASH 511
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A+T D +Y WG G+LG G +A P +E L A G S
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAW--YDEPKLIEALVEKNITFIACGSTYS 569
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
A++ G++ +WG G GRLGHG +++ P L+ L G V A +G
Sbjct: 570 AALSSNGELYTWGRGNYGRLGHGNSDNVM---------IPTLVTALNGHMVVYVACGSGD 620
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
+ C+ +G V+ +GD K+ + ++ P ++ KL +V CGG + LT+
Sbjct: 621 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA 680
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
GE+YTWG E LG G+ D + P ++ V ++ G H A++E + L +G
Sbjct: 681 YGEVYTWGKGEAYRLGHGNEDHVRYP-KIIDILKTKKVKELCVGNLHVLALTEDQ-LIYG 738
Query: 366 WG 367
WG
Sbjct: 739 WG 740
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 115/239 (48%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +P E LS + Q G + AVT GKV +
Sbjct: 3953 GAIYGWGHNHRGQLG-GLEGAKV-KLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 4010
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S++ P L++ ++ V VK A +G H + G V
Sbjct: 4011 GYGAVGRLGIGGTDSVM---------VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP LI +L +E ++ CGG+H+ +TS G LYTWG
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G + +P+ ++ + V V+CG T +++ + W WG G +G
Sbjct: 4122 GRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWGDGDYGKL 4178
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y+WG N QLG G K +K I +P E LS + A G + V+ GK+ + G
Sbjct: 2936 VYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2993
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G +S++ P+ I L +K + +G H+ + ++G+V+
Sbjct: 2994 GTNGRLGLGDDSNVC---------EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFS 3044
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P LI L ++ CG H+ +TS GELYTWG E G
Sbjct: 3045 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG--GSHGTFS 374
LG G P+ VQ + + Q++CG + A ++G + +WG G G G
Sbjct: 3105 LGHGDTATQSKPKLVQSLVGQRII-QIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3163
Query: 375 EDGHSSGGQLDR 386
DG + +DR
Sbjct: 3164 SDGCYTPLLIDR 3175
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 694
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P I LK K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 695 LG-HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQ--IDPAL 751
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V+P PT LSG A G QS A
Sbjct: 752 GTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG G E + + P L + L ++ G +
Sbjct: 3951 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 4001
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+VY G AV ++ + P+L+ + + V GG H L+S G +
Sbjct: 4002 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
Y+WG ++G LG G+ P+ ++ VD ++CG H+AAI S G + TWG
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWG--- 4117
Query: 369 SHGTFSEDGHSSGGQLDRGQLTP 391
G + GH QLTP
Sbjct: 4118 -KGRYGRLGHGDS----EDQLTP 4135
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4222 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4281
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4282 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4316
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ CG ++ L+S GELYTWG G LG G+ D + P V + V V+CG
Sbjct: 562 IACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTA-LNGHMVVYVACGSGD 620
Query: 353 TAAI---SEGKILTWGWGG 368
+ + + G + +WG G
Sbjct: 621 SQTLCVTASGIVFSWGDGN 639
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 178 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 237
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 238 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 296
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 297 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 354
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 355 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 404
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 405 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 464
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ P +V+ + V ++CG TAAI
Sbjct: 465 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 495
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 146 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 202
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 203 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 253
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 254 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 313
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 314 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV-AS 372
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T + + GK+L+ G
Sbjct: 373 LIDYDFYRVACGHSLTVCLTTSGKVLSMG 401
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+RST + L K LE + V G H+A + NG V+ +G+ + ++
Sbjct: 133 IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 192
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
+ P L+ L + V CG +HTC +T+ GELYTWG ++ G LG G+ D H P
Sbjct: 193 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 251
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+R+ G PV VSCG HTA I S G++ T+G G
Sbjct: 252 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG 288
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G G + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLSGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRQS--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKETRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 622
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D +SP V+ + V V CG TAAI
Sbjct: 623 TDDRNSPTLVEA-LKDKQVRSVVCGINFTAAI 653
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ ++CGG H +T+ G VY+ G G+LG + +P I L ++ ++ G
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLIDALAHMNIELVACG 371
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVE-CLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG N GL +V +P ++ L GI + G +
Sbjct: 372 EYHTCAVTLSGDLYTWG-NGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHT 430
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG SI PR ++ L+G++ AA G H
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQSI---------SVPREVESLKGLRTVRAACGVWH 481
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKETRLVPTCVASLVEPNFCQV 539
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS+ G LG D + P RV+G ++ V+++SCG H
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEISCGAYHV 598
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 599 AVLTSRTEVYTWGKGAN 615
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++++WG+ + N +LG A +P +E + + + G + VT
Sbjct: 268 GDVFIWGEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVT 327
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG GRLGHG + + P+LI L + +++ A G H+ +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLIDALAHMNIELVACGEYHTCAV 378
Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
+G +Y +G+ + L GN H L L + + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
L+T+G G LG G + P V+ V + +CG HTAA+ E
Sbjct: 439 LFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSN 497
Query: 359 ---GKILTWGWG 367
GKI TWG G
Sbjct: 498 CSSGKIFTWGDG 509
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+ + + G VY +G+ + ++ +P LI L
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALA 361
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG----SIDVLH-SPERVQGPFSES 341
+ E V CG YHTC +T G+LYTWG NG G +V H P+R+ GP
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFGLSGHGNEVSHWMPKRLNGPLEGI 418
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
V +SCG HTA + S G++ T+G G+F GH
Sbjct: 419 HVSSISCGPWHTAVVTSAGQLFTFG----DGSFGVLGH 452
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ P +V+ + V ++CG TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 418
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T + + GK+L+ G
Sbjct: 296 LIDYDFYRVACGHSLTVCLTTSGKVLSMG 324
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+RST + L K LE + V G H+A + NG V+ +G+ + ++
Sbjct: 56 IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
+ P L+ L + V CG +HTC +T+ GELYTWG ++ G LG G+ D H P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+R+ G PV VSCG HTA I S G++ T+G G
Sbjct: 175 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG 211
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 138/282 (48%), Gaps = 17/282 (6%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EV 125
A + ++ A++CG AHTL L + G VYA GL+ GQLG+ P I L ++
Sbjct: 29 ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQI 88
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ+S GY+HS A++ E++ WG+N GQLGLG + K P ++ L GI Q A G
Sbjct: 89 VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTS-PQLIKSLLGIPFMQIAAG 147
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S +T G + WG G+LG E+ Y P L+K L K+
Sbjct: 148 GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---------DRYVPNLLKSLRSQKIVYICC 198
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CV 302
G H+A + + G V+ FG ++ +H P + +L S +V CG HT
Sbjct: 199 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAF 258
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG---PFSES 341
+ S G +Y++G NG LG GS SP V+G P+SE
Sbjct: 259 VPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQ 300
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 135/252 (53%), Gaps = 16/252 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ +V +S G H+ A+ G++Y WG +++GQLGL + I +P ++ LS I Q
Sbjct: 33 QNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL-PGTEECIRVPRNIKSLSDIQIVQV 91
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G+ S+A++ G +V SWG G+LG G E F + TS P+LIK L G+
Sbjct: 92 SCGYYHSLALSKGSEVFSWGQNKYGQLGLGFE-----FKKQTS---PQLIKSLLGIPFMQ 143
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYH 299
AAG HS + +G ++ +G ++ + N P+L+ L S+++V CG H
Sbjct: 144 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RSQKIVYICCGEDH 202
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--S 357
T LT G ++T+G+ G LG S +P +V S V QV+CG +HT+A S
Sbjct: 203 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-FELMGSIVTQVACGRQHTSAFVPS 261
Query: 358 EGKILTWGWGGS 369
G+I ++G GG+
Sbjct: 262 SGRIYSFGLGGN 273
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 110 WGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 169
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 170 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 229
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 230 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 283
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 21/202 (10%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G ++A+ G+V +WG G+LG G E I PR IK L +++
Sbjct: 41 GDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECI---------RVPRNIKSLSDIQIVQV 91
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G+ HS + + V+ +G ++ L E P LI L P+ + + GG H
Sbjct: 92 SCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQ-IAAGGAH 150
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
+ VLT G ++ WG N+ G LG+ + + P ++ S+ V + CG HTAA++ E
Sbjct: 151 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 209
Query: 359 GKILTWGWGGSHGTFSEDGHSS 380
G + T+G GG + + GH+S
Sbjct: 210 GGVFTFGAGG----YGQLGHNS 227
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 25/334 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG S + F ++ +A G + G V+ GLN GQ
Sbjct: 470 GQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTCGLNKSGQC 529
Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G E + + +SG+ +V + G H A+ DG ++ WG N GQLGLG
Sbjct: 530 GNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGST 589
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P ++ L + AA+ + S V+ G++L++G G+LG H Q
Sbjct: 590 ISKS-HTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQH--- 645
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+++ L V AA G H+ +G VY FG ++ +
Sbjct: 646 --------QHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARN 697
Query: 278 ARRPSLI-SKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ P+L+ + L S+E V CG YHT ++ G+L TWG N+ G LGIGS + +S +
Sbjct: 698 IKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQ 757
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V P S S + SCG H+ + S G+++ +G
Sbjct: 758 FVPLPMS-SKIKNASCGCYHSLILMSNGRVMVFG 790
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 133/287 (46%), Gaps = 23/287 (8%)
Query: 49 GRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G G+ E R PV + S+ A A G H L + G V++ G ND GQLG+
Sbjct: 527 GQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGL 586
Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
I S P I L+++ + + YHHS+ ++ +GEL +G N GQLGL +
Sbjct: 587 GSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQ 646
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V+ LS +AA G +VA T G+V S+G G+LG G +I
Sbjct: 647 --HTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNI------ 698
Query: 224 TSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP L+K G K+ + G+ H+ I E G++ +G ++ H
Sbjct: 699 ---KTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNS 755
Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ LP S ++ CG YH+ +L S G + +G N G LG G+
Sbjct: 756 AQFV-PLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGA 801
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLGS S+ ++ S EK+ + A H+ ++ G + G+ND
Sbjct: 576 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L +VV + + G +H+ A T DGE+Y +GKN GQLGLG
Sbjct: 636 GQLGL-DHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGH 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A+ I P V+ G ++ + G+ +V ++ GK+++WG G+LG G +
Sbjct: 695 --ARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEH 752
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++++++ P + K+K A+ G HS + NGRV +FG
Sbjct: 753 -----KNSAQFVPLPMSS----KIKNASCGCYHSLILMSNGRVMVFG 790
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LGL + + P V A + ACG HT+ T G VY+ G ND+GQ
Sbjct: 630 FGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQ 689
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG- 158
LG+ L + L +++V +S GY+H+ I+ G+L WG+N GQLG+G
Sbjct: 690 LGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749
Query: 159 ---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
K +A+ +P+P + K A+ G S+ + G+V+ +G G+LG G +
Sbjct: 750 KEHKNSAQFVPLPMSSK------IKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGART 803
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
L S P L +V AAGF S YI R+ D
Sbjct: 804 -----LSSADLPLPVPSNSLANDEVVRIAAGFYSS---------YILTGRSSDN 843
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 144/323 (44%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3990 GYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4050 KLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4109
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4110 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4161
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4162 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4218
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H + GE++TWG N+ G LG G+ L P V
Sbjct: 4219 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4277
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4278 LQGKKITRVACGSAHTLAWSTAK 4300
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 3009 GEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3068
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3069 KLG-HGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3127
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ LSG Q A G Q++++T G V +WG G G+LG G
Sbjct: 3128 ATQMKP--KLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGG----- 3180
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP L+ L G+ V G S + + G V+ +G ++ +H
Sbjct: 3181 ----SDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3236
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3237 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVH- 3295
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ +++VSCG H+ A
Sbjct: 3296 ELDDTRMNRVSCGSSHSIA 3314
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 26/291 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LT+ GCVY+ G D G+LG +NI + L + L+K ++ I+ G +S+A++
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS 577
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
GELY WG+ + G+LG G + +PT V L G A G Q++ VT G
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGI 635
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G S TP+++ +L + V G SA + G
Sbjct: 636 VFSWGDGDYGKLGRGG---------SDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ H R P LI L +++ GG H LT +Y WG N
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRN 746
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+ G + + GP P + K+ ++ G ++ W
Sbjct: 747 DYGQI-----------DPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAW 786
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 25/267 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3062 WGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3121
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + ++P + L + VVQ++ G + ++T DG +Y WG G+LG G
Sbjct: 3122 LGHGDT-ATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGG 3180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3181 SDGCYTPL--LVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3236
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3237 -------RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3285
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHT 300
R+PSL+ +L + V CG H+
Sbjct: 3286 IVNRKPSLVHELDDTRMNRVSCGSSHS 3312
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 155/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G VY+TG G
Sbjct: 3937 WGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 3995
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3996 RLGIGGTDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L GI A G S A+T G + +WG G GRLGHG
Sbjct: 4054 GNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4107
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4108 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4162
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ D + P +
Sbjct: 4163 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4222
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V + ++ G H A S+ G++ TWG
Sbjct: 4223 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG 4254
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 177/371 (47%), Gaps = 30/371 (8%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ + +R + Q+ +WG D +LG G S+ + PV K
Sbjct: 2926 FLASDWEVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSK- 2983
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ Y++ EP I L + V++
Sbjct: 2984 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD--YNMCEPKLIPFLSQYVIKK 3040
Query: 128 --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ +G H+ A+T DG+++ WG+ +G+LG G + P +E L + A G
Sbjct: 3041 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN--CTTLDKPRLIESLKSKRIRDIACG 3098
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A
Sbjct: 3099 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TATQMKPKLVQALSGQRVVQVAC 3149
Query: 246 GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
G + + +G VY +GD K+ + P L+ +L +V CG +
Sbjct: 3150 GSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSL 3209
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
LT GE++TWG + LG G+ + P V+G + V+ G H A+++ G+
Sbjct: 3210 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQ 3268
Query: 361 ILTWGWGGSHG 371
+ WG HG
Sbjct: 3269 VYAWG-DNDHG 3278
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4043 WGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4102
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4103 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4160
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4161 -GSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4218 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQ 4270
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4271 RPRLVHALQGKKITRVACGSAHT 4293
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 143/291 (49%), Gaps = 23/291 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L P +S L+ +Q++ G A+T DG++Y
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3988
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3989 TGYGAAGRLGIG--GTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG 4046
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG L + R P+L+++L G+++ A G HSA I G +Y +G
Sbjct: 4047 DDGKLGHGNR---LSYDR------PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGK 4097
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
++ + + RP ++ L + +V CG T +T +++WG + G L
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4157
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G G D P ++ + V +V CG + + A++ G + TWG G H
Sbjct: 4158 GRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH 4207
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AK I +P E LS + Q A G + AVT GKV S
Sbjct: 3932 GAIYGWGHNHRGQLG-GLEGAK-IKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 3989
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G +GRLG G S++ P L++ ++ V +K A +G H + G V
Sbjct: 3990 GYGAAGRLGIGGTDSVM---------VPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP L+ L E ++ CGG+H+ +TS G LYTWG
Sbjct: 4041 YSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRY 4100
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G D P+ V+ + V V+CG T +++ + W WG G +G
Sbjct: 4101 GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWGDGDYGKL 4157
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 126/273 (46%), Gaps = 22/273 (8%)
Query: 124 EVVQIS-TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
EV+Q T + A +Y+WG N QLG G K +K I IP + E LS +
Sbjct: 2932 EVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSK-IKIPVRSEVLSKLKPIHI 2989
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + V+ GK+ + G G +GRLG G + ++ P+LI L +K
Sbjct: 2990 AGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMC---------EPKLIPFLSQYVIKK 3040
Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY 298
A +G H+ + ++G+V+ +G+ K+ +P LI L ++ CG
Sbjct: 3041 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSG 3100
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
H+ + S GELYTWG E G LG G P+ VQ S V QV+CG + +S
Sbjct: 3101 HSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQA-LSGQRVVQVACGSRDAQTMSL 3159
Query: 358 --EGKILTWGWG--GSHGTFSEDGHSSGGQLDR 386
+G + TWG G G G DG + +DR
Sbjct: 3160 TADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDR 3192
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G S P + + ++ +ACG ++ L+ +G +Y G ++G+
Sbjct: 533 WGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGR 592
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG N ++ P ++ LK VV ++ G S +T G ++ WG G+LG G
Sbjct: 593 LGHGSNDDVTV-PTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG 651
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L I + G + S A+T G+V +WG G + RLGHG E +
Sbjct: 652 SDGS--KTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHV-- 707
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+LI+ L K+K + G H + E+ VY +G ++ G
Sbjct: 708 -------RYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVS 760
Query: 280 RPSLISKL 287
PSL L
Sbjct: 761 EPSLCPTL 768
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ +P + + +A G H L +T+TG VYA G ND GQ
Sbjct: 3220 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA-ITVD 141
G I + +P + L + ++S G HS A I VD
Sbjct: 3280 QGNGTTI-VNRKPSLVHELDDTRMNRVSCGSSHSIAWILVD 3319
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + ++ G V+ G ND GQ
Sbjct: 4201 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 4260
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4261 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4295
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 150/320 (46%), Gaps = 20/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG+ E+ PV H +K + GG H+L +T G V++ G G
Sbjct: 2927 GEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ L P I L+ K +V+I+ G HS+A+T DGELY WG G+LG G
Sbjct: 2987 KLG-HGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD- 3044
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+K + IP +V+ L A G Q++A+T V SWG G G+LG G
Sbjct: 3045 -SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGG----- 3098
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ I L G V A G S + G+V+ +G ++ +H
Sbjct: 3099 ----SEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154
Query: 279 RRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R P LI K E+ G H +T GE+Y+WG N++G G G+ V P+
Sbjct: 3155 RSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICL 3214
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + ++CG H+ A
Sbjct: 3215 GELDGVKISHIACGSSHSIA 3234
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 169/344 (49%), Gaps = 33/344 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL----ACGGAHTLFL-TETGCVYATG 96
+WG D G+LG G S+ V S E ++ AL GG+ T+F+ T G VY +G
Sbjct: 2873 VWGLNDKGQLG-GCKGSK----VKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927
Query: 97 LNDFGQLGI--SENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G+LG+ +ENI L+ L + +KK V + G HS IT +G+++ WG+ +
Sbjct: 2928 EGANGRLGLGNTENISIPVQLDTLNMHFVKK--VTVHPGGRHSLCITREGKVFSWGEGID 2985
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G+LG G +++ P T +E L + A G S AVT G++ +WG G GRLGHG
Sbjct: 2986 GKLGHGDVTSRLSP--TLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHG 3043
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKM 270
++ + P+ +K L+ KV A G + + +N V+ +GD K+
Sbjct: 3044 DSKTL---------HIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKL 3094
Query: 271 LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
P I L + + CG + L++ G+++TWG + LG G+
Sbjct: 3095 GRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
SP+ ++GP + + +++ G H A+++ G++ +WG HG
Sbjct: 3155 RSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWG-DNDHG 3197
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 143/312 (45%), Gaps = 20/312 (6%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
PV+ + ++ L+ GG H + LT V++ G + G+LG + + S P +I
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLS-SETPRKIE 3904
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K++V IS G HS+AIT GELY WGK G+LG G + P +E L
Sbjct: 3905 ALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSYK 3962
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++A+T V SWG G G+LG G LR I+ L
Sbjct: 3963 VIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLR---------IESLI 4013
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
G+ V G S + +NG +Y +G ++ +H RRP ++ L + V
Sbjct: 4014 GMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVA 4073
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G H T GE++TWG N+ G LG G+++ + P V +++V CG H+
Sbjct: 4074 AGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVT-VLENVKLNRVGCGSAHSF 4132
Query: 355 AISEGKILTWGW 366
A S + G+
Sbjct: 4133 AWSTEAPIDIGY 4144
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 147/311 (47%), Gaps = 30/311 (9%)
Query: 92 VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
V+ GLND GQLG + E I+ L+ V I+ G +T DG++Y+ G+
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRP--VSIAGGSKTVFIVTYDGKVYVSGE 2928
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
+NG+LGLG + I IP +++ L+ F K+ + G S+ +T GKV SWG G G
Sbjct: 2929 GANGRLGLGN--TENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG TS +P LI+ LE + A G HSA + +G +Y +G
Sbjct: 2987 KLGHGD---------VTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDY 3037
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
++ + P + L + ++ CG T LT +++WG + G LG G
Sbjct: 3038 GRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG 3097
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS----HGTFSEDGH 378
+ + P+++ V +++CG + + A+S GK+ TWG G HG D H
Sbjct: 3098 GSEGCNIPQKIDA-LCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGN---DSH 3153
Query: 379 SSGGQLDRGQL 389
QL G L
Sbjct: 3154 YRSPQLIEGPL 3164
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 163/360 (45%), Gaps = 37/360 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYA--TGLN 98
+WG+ G+LG PV+ A+A GG TLF LT G VYA G +
Sbjct: 3774 VWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVA-GGEQTLFILTSEGKVYASGLGGS 3832
Query: 99 DFGQLGISENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+G S+NI +EPL+ LK E + + +G H+ +T + E++ WG +G+LG
Sbjct: 3833 GRLGIGRSDNIVTPVIIEPLQ--HLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K + P K+E L G + G S A+T G++ +WG G GRLGHG
Sbjct: 3891 HGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDD 3948
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L P+L++ L+ KV A +G + I ++ V+ +GD K+
Sbjct: 3949 CL---------KPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGG 3999
Query: 275 GNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ ++P I L +V CG + LT G+LYTWG + LG G+ D + P
Sbjct: 4000 SDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPR 4059
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+V + V+ G H A ++ G++ TW G + GQL G L P
Sbjct: 4060 KV-ACLQGKQIVTVAAGSLHCVACTDAGEVFTW------------GDNDEGQLGNGTLNP 4106
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 142/314 (45%), Gaps = 29/314 (9%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+K + C + + LT G VY+ N + + + SL ++I + V G
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEAPV---LLDSLIDIKIKKIAANV----EGE 523
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A++ DG +Y WG G+LG G + P V+ L Q A G S AV
Sbjct: 524 HYL-ALSSDGCVYSWGSGDGGRLGHGDIRRE----PELVKELVNKKITQIACGSTYSAAV 578
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
T G++ +WG G GRLGHG S P L+ L G V A +G H+
Sbjct: 579 TSNGELYTWGRGSYGRLGHGN---------SEDRLLPTLVAGLSGSHVVDVACGSGDAHT 629
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----YSEEVVCGGYHTCVLTSG 306
ID++G V+ +GD K+ + + P ++ L Y V+CG + L
Sbjct: 630 LAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKD 689
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
G ++TWG ++ LG G++D + P+ V+G + VD ++ G H A+++ +I TWG
Sbjct: 690 GTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD-IAVGPSHCLALTDNCQIFTWG 748
Query: 366 WGGSHGTFSEDGHS 379
S D ++
Sbjct: 749 SDVQKYALSSDNYN 762
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 19/234 (8%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+D +++WG N GQLG G K +KV PT+++ ++ + A G + VT GKV
Sbjct: 2867 IDSRVFVWGLNDKGQLG-GCKGSKV-KSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVY 2924
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENG 257
G G +GRLG G +I P + L VK G HS CI G
Sbjct: 2925 VSGEGANGRLGLGNTENI---------SIPVQLDTLNMHFVKKVTVHPGGRHSLCITREG 2975
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
+V+ +G+ K+ + P+LI L E+ CG H+ +T+ GELYTWG
Sbjct: 2976 KVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLG 3035
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISEGKILTWGWG 367
+ G LG G LH P++V+ + V ++CG + T A+++ + W WG
Sbjct: 3036 DYGRLGHGDSKTLHIPKQVKA-LQDYKVIDIACGSRDAQTLALTDNNCV-WSWG 3087
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG G S P A + ++CG +H+ +T G +Y G +G+
Sbjct: 3881 WGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGR 3940
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + LK +V+ ++ +G + AIT D ++ WG G+LG G
Sbjct: 3941 LGHGDG-DDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG- 3998
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++E L G+ + G + SVA+T G + +WG G RLGHG +
Sbjct: 3999 -GSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHV-- 4055
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G ++ AAG LH + G V+ +GD ++ N
Sbjct: 4056 -------RRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIP 4108
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+L++ L + V CG H+ + W + ID+ + P ++
Sbjct: 4109 EPTLVTVLENVKLNRVGCGSAHS---------FAWSTE-------APIDIGYMPNQIPVE 4152
Query: 338 FS 339
F+
Sbjct: 4153 FN 4154
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 62 PVVCSAFEKHSLKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
PV+ + +K +A G H L L+ GCVY+ G D G+LG + EP +
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGD---IRREPELVK 558
Query: 120 GL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K++ QI+ G +S+A+T +GELY WG+ S G+LG G ++ +PT V LSG
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRL--LPTLVAGLSGSH 616
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G ++A+ G V SWG G G+LG G S P++++ L+
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGG---------SDCCKVPKVVETLK 667
Query: 237 GVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEE 292
I G S + ++G V+ +G ++ +H R P ++ L + +
Sbjct: 668 HHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD 727
Query: 293 VVCGGYHTCVLTSGGELYTWGSN 315
+ G H LT +++TWGS+
Sbjct: 728 IAVGPSHCLALTDNCQIFTWGSD 750
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 73/302 (24%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKV-------------------------------------- 164
+ Y+WG N GQLG G + KV
Sbjct: 3771 KFYVWGHNHRGQLG-GVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGL 3829
Query: 165 -------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
I P +E L + ++ ++ G ++ +T +V SWG G G+L
Sbjct: 3830 GGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKL 3889
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG + S TPR I+ L G ++ + G HSA I G +Y +G +
Sbjct: 3890 GHGDK---------LSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGR 3940
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ +G+ +P L+ L + +V CG T +T +++WG + G LG G
Sbjct: 3941 LGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGS 4000
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P R++ + V +V CG + + A+++ G + TWG G + GH + +
Sbjct: 4001 DGCKKPLRIESLIGMA-VCKVECGSQFSVALTKNGDLYTWG----KGDYYRLGHGTNDHV 4055
Query: 385 DR 386
R
Sbjct: 4056 RR 4057
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEDEQILTPSKMPWQP-------DSAVNQIACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + S PL+I L V+ QI+ G HS A+T G++ WG N
Sbjct: 59 ACGSNDYAQLGHELS---SKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG V+ +P V L Q A G S+A+T G++ +WG+ G+LG
Sbjct: 116 GQLGHASD-QDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLG-- 172
Query: 213 QESSILGFLRSTSEY----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+++ SE P L+ L G+ V+ A G HS I ++ V+ +G
Sbjct: 173 --------VKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224
Query: 269 KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + + P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCG 284
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
P R+ S + QV+CG +HT A+ + G+I +G G S
Sbjct: 285 NEMLP-RMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSS 328
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 138/300 (46%), Gaps = 18/300 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L S+ RP+ + +ACG H++ LTE G V + G N+ GQL
Sbjct: 61 GSNDYAQLG-HELSSK-RPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K +
Sbjct: 119 GHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGV-KTPS 177
Query: 163 KV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + L GI + A G S ++ V WG G+LG E
Sbjct: 178 ELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------ 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ P +K L + V+ A G S + G V+ G A ++ +
Sbjct: 232 ---TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML 288
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P ++ +L S +V CG HT + G +Y +G +G LG + L+ P+ V GP
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIGP 348
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 27/238 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+K+ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH S P I EL + A G HS + E G+V +
Sbjct: 62 SNDYAQLGH-----------ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSW 110
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A D+ + Q R +L+SK ++ CG H+ LT GELY WGSN
Sbjct: 111 GDNECGQLGHASDQDVVQLPKTVR--ALVSKTVV--QIACGNNHSLALTCCGELYAWGSN 166
Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
G LG+ + L ++P + PV ++CG H+ IS+ + +GWG ++
Sbjct: 167 IYGQLGVKTPSELGQCNAPMLLTTLLG-IPVRAIACGGNHSFLISKSSAV-FGWGRNN 222
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKKA 161
LG L + + + + Q++ G H+ A + G +Y +G S+GQ LG +
Sbjct: 278 LGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQ--LGTRN 335
Query: 162 AKVIPIPTKV 171
K + +P V
Sbjct: 336 TKSLNLPQMV 345
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ P +V+ + V ++CG TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 418
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T + + GK+L+ G
Sbjct: 296 LIDYDFYRVACGHSLTVCLTTSGKVLSMG 324
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+RST + L K LE + V G H+A + NG V+ +G+ + ++
Sbjct: 56 IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
+ P L+ L + V CG +HTC +T+ GELYTWG ++ G LG G+ D H P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+R+ G PV VSCG HTA I S G++ T+G G
Sbjct: 175 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG 211
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 179/385 (46%), Gaps = 40/385 (10%)
Query: 7 TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
A +K+++++D L G + + R F +G+ +G+LGLG + +P
Sbjct: 15 NAPSKFWIREDKVLHISCGDEHTSLLAGDGRVFT--FGDNAWGQLGLGHTKPVTKPTRIK 72
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
+ + + +ACG +HTL TE+G +Y+ G N+ QLG+ + P I GL+ V
Sbjct: 73 SLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAV 132
Query: 127 Q-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-----VIPIPTKVECLSGIFTK 180
+ +S G +HS +T G +Y+WG GQLG G+ K + + +V C+
Sbjct: 133 KMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEVVCI------ 186
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G+ + VT GGK+L++G G+LG G ++ P+++ +EG V
Sbjct: 187 --ACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTG--------DNCLPKVVDGIEGHVV 236
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDK-----MLFQEGNHARRPSLI--SKLPYSEEV 293
+A G H+ I VY FG+ + + ML Q A P I K
Sbjct: 237 SVACGG-AHTVAI-TGWLVYTFGNGSSGQLGHGNMLLQ----ADTPHKIVWQKPTKVRSA 290
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESPVDQVSCGWKH 352
CG HT ++T G+L+T G +G L +G + + + FS+ V+QVSCG H
Sbjct: 291 SCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCH 350
Query: 353 TAAISEGKILTWGWGGSHGTFSEDG 377
T A GK +H + E+G
Sbjct: 351 TLAT--GKPSLQNGNAAHDSSDEEG 373
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 164/324 (50%), Gaps = 26/324 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++++ D + G I + R + +G+ D+G+LGLG ++ +P + +
Sbjct: 29 SKFWIRNDKAMHISCGDEHSAIITESGRLYT--FGSNDWGQLGLGHMKPTTKPGCVKSLK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ + +ACG +HT+ T+ G +Y+ G GQLG + + P I+ +++ +S
Sbjct: 87 QEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGD-AQCATSPQLINLPEQKYKLLS 145
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS+A+T DG LYMWG S GQLGLG + + P +++ S + + G+ +
Sbjct: 146 AGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDS--VETPKELKFHSSV--SWVSCGYYHT 201
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT GK+ ++G G+LG ++ L T+ TP+ ++ + K+K+ A G H
Sbjct: 202 AIVTDDGKLYTFGEKEFGKLGLTEDQ-----LEDTT--TPKHVESIT-EKIKLVACGGAH 253
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLP--YSEEVVCGGYHTCV 302
+A I + G +Y FG D M Q GN P +++L + V CG HT V
Sbjct: 254 TAVISDVGNLYTFG----DGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAV 309
Query: 303 LTSGGELYTWGSNENGCLGIGSID 326
+T G +YT+G +G LGI D
Sbjct: 310 ITEKGAMYTFGDGRHGKLGISEED 333
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 164/323 (50%), Gaps = 25/323 (7%)
Query: 57 ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+SR+ + S F + KA+ +CG H+ +TE+G +Y G ND+GQLG+ ++ + +
Sbjct: 20 KSRFADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLG-HMKPTTK 78
Query: 115 PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + LK+E V ++ G H+ T G LY +G S+GQLG G P ++
Sbjct: 79 PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSP---QLIN 135
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L K + G + S A+T G + WG+G G+LG G S+ TP+ +K
Sbjct: 136 LPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSV---------ETPKELK 186
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE 291
V + G+ H+A + ++G++Y FG++ K+ E P + +
Sbjct: 187 FHS--SVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKI 244
Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCG 349
++V CGG HT V++ G LYT+G +G LG G S+ L P++V SE VSCG
Sbjct: 245 KLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKV-ARLSEHKCKYVSCG 303
Query: 350 WKHTAAISE-GKILTWGWGGSHG 371
HTA I+E G + T+G G HG
Sbjct: 304 DNHTAVITEKGAMYTFG-DGRHG 325
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 138/289 (47%), Gaps = 28/289 (9%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ ++N+ P + + + IS G HS+ IT G LY
Sbjct: 9 IPETGAIFT-----FGKSRFADNL-----PSKFWIRNDKAMHISCGDEHSAIITESGRLY 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLGLG K P V+ L A G ++ T G++ S+GAG
Sbjct: 59 TFGSNDWGQLGLGH--MKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGS 116
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G + +P+LI L K K+ +AG HSA + +G +Y++G
Sbjct: 117 DGQLGTGD---------AQCATSPQLIN-LPEQKYKLLSAGTDHSAALTTDGTLYMWGSG 166
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI--G 323
+ ++ + P + V CG YHT ++T G+LYT+G E G LG+
Sbjct: 167 SEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTED 226
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
++ +P+ V+ + + V+CG HTA IS+ G + T+G G HG
Sbjct: 227 QLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFG-DGMHG 272
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 43 WGNGDYGRLGL--GSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+G ++G+LGL LE P V S EK +K +ACGGAHT +++ G +Y G
Sbjct: 213 FGEKEFGKLGLTEDQLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFGDGM 270
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG ++ P +++ L + + +S G +H++ IT G +Y +G +G+LG+
Sbjct: 271 HGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGIS 330
Query: 159 KKAAKVIPIPTKV 171
++ I P KV
Sbjct: 331 EEDFCNIFKPCKV 343
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 250 SACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLI-SKLPYSEEVVCGGYHTCVLTSGG 307
A I E G ++ FG R D + PS + + + CG H+ ++T G
Sbjct: 6 DADIPETGAIFTFGKSRFADNL----------PSKFWIRNDKAMHISCGDEHSAIITESG 55
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
LYT+GSN+ G LG+G + P V+ + V+ V+CG HT ++ G++ ++G
Sbjct: 56 RLYTFGSNDWGQLGLGHMKPTTKPGCVKS-LKQEGVNLVACGRSHTIVCTKAGRLYSFGA 114
Query: 367 G 367
G
Sbjct: 115 G 115
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG RP + A E + ++CG H+L + G V+A G GQL
Sbjct: 46 GDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E P +I L +++Q+S G++HS A++ DG++Y WGKNS GQLGLGK+
Sbjct: 106 GIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFP 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 166 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQL------ALSGNNT 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + +NG+V+ FGD + ++ + R P
Sbjct: 219 PVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQ 278
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNEN 317
+ + ++ CG YHT + + GE+ ++G N
Sbjct: 279 QVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRN 315
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 151/304 (49%), Gaps = 22/304 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTG 131
++ ACG H+L L G V++ G N GQLG P I L+ +V +S G
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLG-RRGKPREERPGLIKALETLLVGLVSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+ + K+ P K++ L+GI Q + G S+A
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIF-TPKKIKTLTGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS
Sbjct: 141 LSEDGQVYSWGKNSQGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV---CGGYHTCVLTS 305
+ +G + +G ++ N +P I L S +V+ CG HT VLT
Sbjct: 193 ALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALK-SLDVIYISCGYEHTAVLTQ 251
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILT 363
G+++T+G N G LG P++V+G + V Q+ CG HT A + G++++
Sbjct: 252 NGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVYTTGEVVS 309
Query: 364 WGWG 367
+G G
Sbjct: 310 FGRG 313
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G +QAA G S+ + G V S G G+LG + E P LIK L
Sbjct: 20 GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPR---------EERPGLIKAL 70
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLPYSE--E 292
E + V + + G HS + GRV+ +G + ++ +E P I L + +
Sbjct: 71 ETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQ 130
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWK 351
V CG YH+ L+ G++Y+WG N G LG+G SP+RV+ P+ QV+ G
Sbjct: 131 VSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGA 189
Query: 352 HTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQ 383
H+ A+S ++GWG ++ G + G+++ Q
Sbjct: 190 HSFALSLSGT-SFGWGSNNTGQLALSGNNTPVQ 221
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 178/362 (49%), Gaps = 26/362 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+L L E + + + ++ ++CG HTL+L E G + + G N +
Sbjct: 4 WGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N S+E +IS L+ + +V IS G +HS A++ +G +Y WG S GQLG G
Sbjct: 64 GQLGRKSN-NSSIE--QISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ P K+ L Q + G S+A++ G+V SWG G+LG G S I+
Sbjct: 121 LSSRNF-TPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLG--SQII- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
++ TP+L+K L+G+ + AG S + +G V+ +G ++ F+
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKG 231
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+P ++ L + CG HT VL+ G +YT+G + +G LG S + P++++
Sbjct: 232 TFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIE 291
Query: 336 GPFSESPVDQVSCGWKHTA--AISEGKILTWGWGG---SHGTFSEDGHSSGGQLDRGQLT 390
+ V QV+CG HT S +I+++G G T D + D L
Sbjct: 292 DYAGQ--VSQVACGRYHTLLYVFSCNRIVSFGKGSLRPQDNTECSDEAELPSEFDISSLV 349
Query: 391 PS 392
P+
Sbjct: 350 PT 351
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQL L + +V+ S ++ + G + ++ + G +LS G
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG R ++ + I LE + + G HS + + G +Y +G
Sbjct: 61 NPYGQLG-----------RKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWG 109
Query: 264 DRAVDKMLFQEGNHARR---PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
D + ++ GN + R P I+ L ++ ++ CG +H+ L+ G +++WG N+ G
Sbjct: 110 DGSEGQL--GTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCG 167
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
LG+GS + + ++ P+ QV+ G + A+S G + WG
Sbjct: 168 QLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWG 215
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 153/333 (45%), Gaps = 33/333 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 339 WGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNF 398
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ ++ G+L+ +G + G LG G
Sbjct: 399 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHG 457
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K I +P +VE L G+ T QAA G + AV GK+ +WG G
Sbjct: 458 DR--KSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 515
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + +G VY G
Sbjct: 516 GRLGHGDKEAKL---------VPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGS-P 565
Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V L + + P+ + KL S EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 566 VYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 625
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D + P V+ + V ++CG TAAI
Sbjct: 626 DTDDKNLPSLVEA-LKDKQVKSIACGTNFTAAI 657
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G +++ G G+LG + ++ L P I L ++ ++
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPQLIEALSNTNIEFVA 373
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 374 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 431
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ V+ G++ ++G G G LGHG SI PR ++ L+G++ AA G
Sbjct: 432 WHTAVVSSAGQLFTFGDGTFGVLGHGDRKSI---------SLPREVESLKGLRTVQAACG 482
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ + P+ +S L P
Sbjct: 483 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVSALVEPNF 540
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG T T+ G +YT GS G LG D P RV+G S S V++++CG
Sbjct: 541 CQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDG-KLPARVEGKLSRSSVEEIACGA 599
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S+ ++ TWG G +
Sbjct: 600 YHVAVLTSKTEVYTWGKGAN 619
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G++ SWG GRLGHG +S +L
Sbjct: 305 LPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 356
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI+ L ++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 357 -HPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 415
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT V++S G+L+T+G G LG G + P V+
Sbjct: 416 NGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLR 475
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V Q +CG HTAA+ E GK+ TWG G
Sbjct: 476 TV-QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 513
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G ++ +G+ + ++ + P LI L
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ +V H P+RV GP V
Sbjct: 366 NTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 424
Query: 344 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
+SCG HTA +S G++ T+G GTF GH
Sbjct: 425 SSISCGPWHTAVVSSAGQLFTFG----DGTFGVLGH 456
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 157/334 (47%), Gaps = 30/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 286 WGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNA 345
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 346 GLLGHGSTVSHWI-PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHG 404
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G S AV GK+ +WG G RL
Sbjct: 405 NR--ETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRL 462
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S+ L P + L +A G + + +G ++ G +V
Sbjct: 463 GHGDRSAKL---------KPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGS-SVYG 512
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L N R P L+ EV CG YH VLT+ GE+YTWG NG LG G I
Sbjct: 513 QLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIA 572
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
P V+ + V +++CG TAAIS+ K
Sbjct: 573 DRKVPTLVEA-LRDRSVKRIACGSSFTAAISQHK 605
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+G + G A I +P +E + A G + + +
Sbjct: 219 GDVYVWGEVMCDTTSRSGSDGNVH-GPGATTDILVPKPLESNVMLDVSYVACGVKHAALI 277
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T +V +WG SGRLGHG +SI + PRL++ L V+I A G H+
Sbjct: 278 TRQAEVFTWGEECSGRLGHGAGTSI---------FQPRLLESLSICNVEIIACGEFHTCA 328
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSG 306
+ G +Y +GD + L G+ P +S P V CG +HT ++TS
Sbjct: 329 VTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSG-PLEGLQVSTVSCGTWHTALITSS 387
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
G+LYT+G G LG G+ + + P+ V+ + VSCG H+AA+ E
Sbjct: 388 GQLYTFGDGTFGALGHGNRETISYPKEVESLKGLRTI-SVSCGVWHSAAVVEVIMTQSNA 446
Query: 359 --GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 447 SSGKLFTWGDGDKY 460
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + ++ G +T P+ ++ + V A G H+A I V+ +G+ ++
Sbjct: 236 GSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLG 295
Query: 272 FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDV 327
G +P L+ L E + CG +HTC +T+ G+LYTWG ++ G LG GS
Sbjct: 296 HGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVS 355
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
P+RV GP V VSCG HTA I S G++ T+G GTF GH
Sbjct: 356 HWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFG----DGTFGALGH 403
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V ++ G H++ IT E++ WG+ +G+LG G A I P +E
Sbjct: 254 KPLE-SNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHG--AGTSIFQPRLLES 310
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + A G + AVT G + +WG G +G LGHG + S + P+
Sbjct: 311 LSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS---------TVSHWIPKR 361
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG++V + G H+A I +G++Y FGD + P + L
Sbjct: 362 VSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLKGL 421
Query: 289 YSEEVVCGGYHTCVLT---------SGGELYTWGSNENGCLGIG 323
+ V CG +H+ + S G+L+TWG + LG G
Sbjct: 422 RTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHG 465
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 127 bits (320), Expect = 7e-27, Method: Composition-based stats.
Identities = 109/339 (32%), Positives = 161/339 (47%), Gaps = 24/339 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ +R PV+ + + + G T+ L G V+ G N+ GQ
Sbjct: 57 WGYGDRGQLGNGTWSARTTPVMAKGL--NHVIDVHTGVRSTMALRSDGTVWTWGSNENGQ 114
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI ++ P ++SGL + V GY HS A++ DG ++ WGKN NG+LG G
Sbjct: 115 LGIGTVTDMNV-PGQVSGLSGIKAVSGGLGY-HSMALSEDGSVWTWGKNDNGELGNGTTL 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ +V L+ + T AA G+ S+A+ G V +WG G G LG G
Sbjct: 173 QQNTPV--QVAGLNDV-TAIAAGGY-FSLALKSDGTVWAWGVNGDGELGDGT-------- 220
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T Y P + L V AAG HS + ++G V+ +G + + RP
Sbjct: 221 -TTDRYVPVQVAGL--TDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRP 277
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
I L + V GGYH+ L G +++WG N LG+GS P V G
Sbjct: 278 VQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGI---E 334
Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
V +++ G H+ A+ + + WGWG + G DG SS
Sbjct: 335 HVREIAAGGFHSVAMKKDGTV-WGWGFNGGGQLGDGTSS 372
Score = 124 bits (311), Expect = 7e-26, Method: Composition-based stats.
Identities = 92/323 (28%), Positives = 156/323 (48%), Gaps = 20/323 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
WG+ + G+LG+G++ P S +KA++ G G H++ L+E G V+ G ND G
Sbjct: 107 WGSNENGQLGIGTVTDMNVPGQVSGLS--GIKAVSGGLGYHSMALSEDGSVWTWGKNDNG 164
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + + P++++GL +V I+ G + S A+ DG ++ WG N +G+LG G
Sbjct: 165 ELGNGTTLQQN-TPVQVAGLN-DVTAIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTT 222
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ +V L+ + A G S+AVT G V +WG G LG G
Sbjct: 223 DRYVPV--QVAGLTDVMA--IAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTR------- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P IK L+ + V +A G+ HS +D G V+ +GD + ++ + P
Sbjct: 272 --TNRTRPVQIKNLQHI-VAVAGGGY-HSLALDRTGNVWSWGDNSQRQLGVGSNASSLIP 327
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+S + + E+ GG+H+ + G ++ WG N G LG G+ +P + +
Sbjct: 328 VPVSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTT 387
Query: 342 PVDQVSCGWKHTAAISEGKILTW 364
P D S + ++ L W
Sbjct: 388 PPDPGSGTLNPDSITTDSVALQW 410
Score = 98.6 bits (244), Expect = 4e-18, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 43 WG-NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG NGD G LG G+ R+ PV + + A+A GG+H+L +T+ G V+A G N +G
Sbjct: 208 WGVNGD-GELGDGTTTDRYVPVQVAGLT--DVMAIAAGGSHSLAVTQDGTVWAWGKNTYG 264
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P++I L + +V ++ G +HS A+ G ++ WG NS QLG+G A
Sbjct: 265 TLGDGTRTNRT-RPVQIKNL-QHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNA 322
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +IP+P +SGI ++ A G SVA+ G V WG G G+LG G
Sbjct: 323 SSLIPVP-----VSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT------- 370
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S++ TP L K + +G L+ I + V + +AVD M Q
Sbjct: 371 --SSTRDTPTLTKAVLDTTPPDPGSGTLNPDSITTDS-VALQWPKAVDNMTEQ 420
Score = 90.1 bits (222), Expect = 2e-15, Method: Composition-based stats.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 19/250 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ GY+H++++ GE+Y WG GQLG G +A+ P+ K L+ + G
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAK--GLNHVIDVHT--GV 92
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ G V +WG+ +G+LG G T P + L G+K G
Sbjct: 93 RSTMALRSDGTVWTWGSNENGQLGIGT---------VTDMNVPGQVSGLSGIKAVSGGLG 143
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
+ HS + E+G V+ +G ++ P ++ L + GGY + L S
Sbjct: 144 Y-HSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAIAAGGYFSLALKSD 202
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
G ++ WG N +G LG G+ + P +V G + V ++ G H+ A+++ + W W
Sbjct: 203 GTVWAWGVNGDGELGDGTTTDRYVPVQVAG---LTDVMAIAAGGSHSLAVTQDGTV-WAW 258
Query: 367 G-GSHGTFSE 375
G ++GT +
Sbjct: 259 GKNTYGTLGD 268
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 160/338 (47%), Gaps = 30/338 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G+ +R PV ++A+A H+L + + G V+A G+N GQ
Sbjct: 164 WGPNDYGQLGDGTTTNRPVPVQVGGLS--GIRAVAASSDHSLAVRDDGTVWAWGINSSGQ 221
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P++++GL + +++ G +S A+ DG ++ WG NS+GQLG G
Sbjct: 222 LG-DGTTNDRLTPVQVAGL-SSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTD 279
Query: 163 KVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V+ LS + AA LG +AV G G V +WG GSG+LG G
Sbjct: 280 RL--TPGRVKGLSEVVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGT----- 332
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFL-------HSACIDENGRVYIFGDRAVDKML 271
+T TP + EL+GVK F +S + +G V+ +G + ++
Sbjct: 333 ----TTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLG 388
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
RP+ ++ L V H + G +++WG N NG LG + P
Sbjct: 389 DGTTISRSRPAQVNALSGITAVSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIP 448
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
+V G S V V+ G H+ ++ E GK WG+ G
Sbjct: 449 VQVHG---LSGVRSVAAGESHSVSVREDGKAWAWGYRG 483
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 34/306 (11%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A+A G HTL L G V+A G ND+GQLG + P+++ GL + ++ H
Sbjct: 144 AVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV-PVQVGGLSG-IRAVAASSDH 201
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ DG ++ WG NS+GQLG G ++ P+ +V LS I K+ A G S+AV G
Sbjct: 202 SLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPV--QVAGLSSI--KRVAAGDGYSLAVHG 257
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA-----GFLH 249
G V +WG SG+LG G +T TP +K L V V+++AA G H
Sbjct: 258 DGTVWAWGINSSGQLGDGT---------TTDRLTPGRVKGLSEV-VEVSAAKYSLLGSAH 307
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG---------GYHT 300
+ +G V+ +G+ ++ P +S+L + + G G ++
Sbjct: 308 VLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYS 367
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
+ G ++ WGSN G LG G+ P +V + S + VS H A+ +G
Sbjct: 368 LAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVN---ALSGITAVSASSDHALAMRDDG 424
Query: 360 KILTWG 365
+ +WG
Sbjct: 425 TVWSWG 430
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---------GAHTLFLTETGCVY 93
WGN G+LG G+ R PV S E +KA+A G G+++L + G V+
Sbjct: 320 WGNNGSGQLGDGTTTDRLTPVQVS--ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVW 377
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
A G N GQLG I S P +++ L + +S H+ A+ DG ++ WGKN+NG
Sbjct: 378 AWGSNSTGQLGDGTTISRS-RPAQVNALSG-ITAVSASSDHALAMRDDGTVWSWGKNTNG 435
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG A ++IP+ +V LSG+ + A G SV+V GK +WG G G LG G
Sbjct: 436 KLGDETTAHRLIPV--QVHGLSGV--RSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGA 491
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
FL + P L +IA+ G S + E+ ++++G ++ +
Sbjct: 492 M-----FL----SFVPVQTMGLT-ATAQIASHGN-RSLAVKEDNTLWVWGSSSLGDL--G 538
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+G+ P S L + V G ++ + + G L+ WGSN G LG GS +P
Sbjct: 539 DGSTGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVP 598
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
V G E+ V + A S+G + WG
Sbjct: 599 VNG--LENVVGAAASFSVSLALRSDGTVWAWG 628
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 27/326 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G LG GS + PV S + +KA+A G ++L + G ++A G N G
Sbjct: 528 VWGSSSLGDLGDGSTGAH--PVPSSILDD--VKAVAAGNDYSLAVRNNGSLWAWGSNSIG 583
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG L P+ ++GL+ VV + + S A+ DG ++ WG NS GQLG G
Sbjct: 584 QLGDGSTTNR-LTPVPVNGLEN-VVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTI 641
Query: 162 AKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P + + G+ T S+A+ G V +WG G+LG G
Sbjct: 642 NRSTPGPVGGLVHIVGVATSGG-----HSLALRNDGTVWAWGGNHDGQLGDGT------- 689
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T++ P + L GVK AA + SA + +NG V+ +GD ++
Sbjct: 690 --TTNQPKPVQVSGLSGVKAVAAAI--VSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLT 745
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P L+S L + + G +H L + G ++ WG N LG G+ +P +V+G
Sbjct: 746 PVLVSGLSGVKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQVRG---L 802
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
S V ++ G H+ A+ +G + TWG
Sbjct: 803 SDVKLIAAGENHSMAVRKDGTVWTWG 828
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV+ S +KALA G H L L G V+A G N + Q
Sbjct: 727 WGDNYSGQLGDGTTTDRLTPVLVSGLS--GVKALASGNHHFLALRNDGTVWAWGDNYYSQ 784
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++ GL +V I+ G +HS A+ DG ++ WG N++GQLG G
Sbjct: 785 LGDGTRTQRS-TPVQVRGLS-DVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842
Query: 163 KVIPIP 168
+P+P
Sbjct: 843 SALPVP 848
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ++ +PV S +KA+A + + + G V+A G N GQ
Sbjct: 677 WGGNHDGQLGDGTTTNQPKPVQVSGLS--GVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQ 734
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ +SGL V +++G HH A+ DG ++ WG N QLG G +
Sbjct: 735 LGDGTTTDR-LTPVLVSGLSG-VKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQ 792
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P+ +V LS + K A G S+AV G V +WG SG+LG+G
Sbjct: 793 RSTPV--QVRGLSDV--KLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNG 838
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
Q LG A+ + + C++ A+G + ++ + G V +WG G+LG G
Sbjct: 121 QNALGLSASASFVLSSSPTCIA----PAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGT 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+T+ P + L G++ AA HS + ++G V+ +G + ++
Sbjct: 177 ---------TTNRPVPVQVGGLSGIRA--VAASSDHSLAVRDDGTVWAWGINSSGQLGDG 225
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
N P ++ L + V G ++ + G ++ WG N +G LG G+ +P R
Sbjct: 226 TTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGR 285
Query: 334 VQGPFSESPVDQVSC------GWKHTAAIS-EGKILTWGWGGS 369
V+G SE V +VS G H A+ +G + WG GS
Sbjct: 286 VKG-LSE--VVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGS 325
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 162/338 (47%), Gaps = 22/338 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P + + + CG +HTLFLT+ G +YA G ND
Sbjct: 6 WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65
Query: 101 GQLGISENIGYSLEPL-----RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG + + P R++ L+ ++ IS G HS A+T G+++ WG N+ GQ
Sbjct: 66 GQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 125
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG + + P P ++ + Q A G +A+T G++ +WG+ G+LG G
Sbjct: 126 LGHDAENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 184
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P LI+ L GV + A G HS + ++G ++ +G ++ +
Sbjct: 185 SEKVPM--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND 236
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
N P+ + L + CG + LT+ G ++T G+ G LG GS P
Sbjct: 237 LNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPR 296
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGG 368
+V S + Q++CG +HT A S GKI +G GG
Sbjct: 297 KV-FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGG 333
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 157/316 (49%), Gaps = 22/316 (6%)
Query: 44 GNGDYGRLG--LGSLESRWRPVV-----CSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
GN D+G+LG L +L ++ RP + ++ E + + ++CG AH+L LT G V++ G
Sbjct: 61 GNNDHGQLGHDLDTLPNK-RPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 119
Query: 97 LNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQLG G P I + K VVQI++G +H A+T +GELY WG NS GQL
Sbjct: 120 SNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQL 179
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+G + KV P+PT ++ L+G+ A G S AV+ G + WG G+LG +
Sbjct: 180 GIGTTSEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S P ++ L + V+ + G S + G V+ G ++
Sbjct: 239 ---------SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 289
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPE 332
++ P + +L S+ ++ CG HT S G++Y +G G LGIG + +P+
Sbjct: 290 SNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQ 349
Query: 333 RVQGPFSESPVDQVSC 348
V+GP+ ++ C
Sbjct: 350 IVRGPWFKTDFKSSDC 365
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 21/233 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG ++G+LGLG + + +P K++ + G ++ +T GK+ + G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRL-----IKELEGVKVKIAAAGFLHSACIDENGR 258
G+LGH L + PR+ + LE + + G HS + G+
Sbjct: 63 NDHGQLGHD--------LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 259 VYIFGDRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGS 314
V+ +G AV + L + + R+P+ +I + + ++ G YH LT+ GELY WGS
Sbjct: 115 VFSWGSNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGS 173
Query: 315 NENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
N G LGIG+ + + P +Q + P+ ++CG H+ A+S+ G I WG
Sbjct: 174 NSYGQLGIGTTSEKVPMPTLIQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWG 225
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG ++FLT G V+ G FGQ
Sbjct: 224 WGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLG 158
LG + + P ++ L ++ QI+ G H+ A + G++Y +G GQLG+G
Sbjct: 284 LG-HGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D ++P V+ + V V CG TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372
Query: 133 HHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWHT 430
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D L P RV+G ++ V+++SCG H
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 599 AVLTSRTEVYTWGKGAN 615
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + CG +HT ++TS G+L+T+G G LG G L P V+
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GKI TWG G
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+A + + G +Y +G+ + ++ +P LI L
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ DV H P+RV GP V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
+SCG HTA + S G++ T+G G+F GH L
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFG----DGSFGVLGHGDRASL 458
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 154/329 (46%), Gaps = 23/329 (6%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+ WGN + G+LG G R PV + + A+A G HT LT G V G N +
Sbjct: 129 SCWGNNESGQLGNGITIQRRTPVQVAGLSS-GVAAIAAGEYHTCALTTDGAVTCWGSNGY 187
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG S P++++GL V I+ G H+ A+T G + WG+N NGQLG G
Sbjct: 188 GQLGDGTTTQRS-TPVQVAGLSSGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTT 246
Query: 161 AAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+ + G+ ++ AA+ G + A+T GG V WGA SG+LG G
Sbjct: 247 TQRSTPVN-----VLGLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDG------ 295
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ TP + L V AAG H+ I G V +G ++
Sbjct: 296 ---TTDERSTPVDVVGLSS-GVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQ 351
Query: 279 RRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P +++ L + + G HTC +T+GG + WG N +G LG G+ +P +V+G
Sbjct: 352 STPVVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGL 411
Query: 338 FSESPVDQVSCGWKHTAAIS-EGKILTWG 365
S V ++ G HT A+S EG + WG
Sbjct: 412 --SSGVADITAGDSHTCALSTEGGVTCWG 438
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 148/329 (44%), Gaps = 21/329 (6%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+ WG G+LG G+ R P+ + + G +HT L+ G V G N+
Sbjct: 384 SCWGRNWSGQLGDGTTTQRRTPMQVEGLSS-GVADITAGDSHTCALSTEGGVTCWGNNES 442
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG I S P+++ GL VV I+ G H+ A++ +G + WG N +GQLG G
Sbjct: 443 GQLGDGTTIQRS-TPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTT 501
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +VE L SG+ A G + A+T GG V WG G+LG G
Sbjct: 502 TQRSTPV--QVEGLSSGVMAITA--GDSHTCALTTGGGVTCWGGNWYGQLGDG------- 550
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T P + L IAA G H+ + G V +G D++ +
Sbjct: 551 --TTTQRNMPVNVVGLSSGVAAIAAGGS-HTCALSTEGGVTCWGWNTYDQLGDGTRTNHN 607
Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L + GY HTC L + GE+ WG N G LG G+ +P V G
Sbjct: 608 TPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLS 667
Query: 339 SESPVDQVSCGWKHTAAISEGKILT-WGW 366
SE V + G+ HT A+S G +T WGW
Sbjct: 668 SE--VAAIVAGYAHTCALSTGGGVTCWGW 694
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 140/294 (47%), Gaps = 22/294 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G A+T LT V G N+FGQLG I + P+ ++GL VV I+ GY H+
Sbjct: 61 IAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRN-TPVAVNGLSSGVVAIAAGYAHT 119
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G + WG N +GQLG G + P+ +V LS AA G + A+T
Sbjct: 120 CALTTSGGVSCWGNNESGQLGNGITIQRRTPV--QVAGLSSGVAAIAA-GEYHTCALTTD 176
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V WG+ G G+LG G +T TP + L I A G H+ +
Sbjct: 177 GAVTCWGSNGYGQLGDG---------TTTQRSTPVQVAGLSSGVTAITAGGS-HTCALTT 226
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTW 312
G V +G ++ +G +R + ++ L S EV G +TC LT+GG + W
Sbjct: 227 GGAVTCWGRNGNGQL--GDGTTTQRSTPVNVLGLSSEVAAITAGDVYTCALTTGGGVTCW 284
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G+N +G LG G+ D +P V G S V ++ G HT AI+ G + WG
Sbjct: 285 GANWSGQLGDGTTDERSTPVDVVGL--SSGVTAIAAGNDHTCAITTGGGVSCWG 336
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 134/306 (43%), Gaps = 24/306 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + A+ G +HT LT G V G N +GQ
Sbjct: 488 WGGNGSGQLGNGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQ 546
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+ + GL V I+ G H+ A++ +G + WG N+ QLG G +
Sbjct: 547 LGDGTTTQRNM-PVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTN 605
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +VE LS AA G+ + A+ G+V WG G+LG G
Sbjct: 606 HNTPV--QVEGLSSGVAAIAA-GYAHTCALITSGEVTCWGWNWYGQLGDG---------T 653
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN----HA 278
+T TP ++ L +V AG+ H+ + G V +G +Q GN
Sbjct: 654 TTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTCWGW----NKYYQLGNGTISQR 708
Query: 279 RRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L + G HTC L++GG + WG + G LG+G+I +P V
Sbjct: 709 SIPMDVDGLSSGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTVL 768
Query: 338 FSESPV 343
F PV
Sbjct: 769 FVYLPV 774
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
I+ + + G +TC LT+ + WG+NE G LG G+ ++P V G S V
Sbjct: 52 IASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVAVNGL--SSGV 109
Query: 344 DQVSCGWKHTAAI-SEGKILTWG 365
++ G+ HT A+ + G + WG
Sbjct: 110 VAIAAGYAHTCALTTSGGVSCWG 132
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D ++P V+ + V V CG TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372
Query: 133 HHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWHT 430
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D L P RV+G ++ V+++SCG H
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 599 AVLTSRTEVYTWGKGAN 615
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + CG +HT ++TS G+L+T+G G LG G L P V+
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GKI TWG G
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+A + + G +Y +G+ + ++ +P LI L
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ DV H P+RV GP V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
+SCG HTA + S G++ T+G G+F GH L
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFG----DGSFGVLGHGDRASL 458
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 156/340 (45%), Gaps = 47/340 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P R++G + + IS G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G +Y G
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG GS D ++P V+ + V ++CG TAAI
Sbjct: 612 NGRLGHGSTDDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 650
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ +ACG H +T+ G V++ G G+LG + + P I L ++ ++ G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACG 368
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + +G LG GK + +P L G+ + G +
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLHISSISCGPWHT 427
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT GK+ ++G G G LGHG SI PR ++ L+G++ AA G H
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSI---------SIPREVESLKGLRTVRAACGVWH 478
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 479 TAAVVEVIIGNPNSNNNSSGKLFTWGDG--DKGRLGHGDKEARLVPTCVAALVEPNFCQV 536
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D P RV+G S+S V++++CG H
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEELACGAYHV 595
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 596 AVLTSRTEVYTWGKGAN 612
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + A G + VT G+V SWG GRLGHG +S
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
+ P+LI L + +++ A G H+ + +G +Y +GD + L G P +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT ++TS G+L+T+G G LG G D + P V+
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLR 468
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GK+ TWG G
Sbjct: 469 TV-RAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDG 506
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 18/177 (10%)
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
R+G +S I L P+ ++ + + V+ A G H+A + + G V+ +G+
Sbjct: 285 RVGSSFDSKIDSLL-------PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYG 337
Query: 268 DKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIG 323
++ + A P LI L E V CG YHTC +T G+LYTWG + +G LG G
Sbjct: 338 GRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHG 397
Query: 324 SIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
DV H P+RV GP + +SCG HTA + S GK+ T+G GTF GH
Sbjct: 398 K-DVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFG----DGTFGVLGH 449
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 9/261 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + R RP + A E ++ L+CG H+L + G V+A G GQL
Sbjct: 46 GDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P+++ L +++Q+S G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 106 GIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFL 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V+ L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 166 SQ-ESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNV 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR I L+ + V + G H+A + ++G+V+ FGD + ++ R P
Sbjct: 219 PVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQ 278
Query: 283 LISKLP-YSEEVVCGGYHTCV 302
L+ + ++ CG YHT V
Sbjct: 279 LVEGIDGLVSQIDCGSYHTLV 299
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 20/310 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G V+A G N GQLG + + P I L+ V +S G
Sbjct: 23 LRQAASGERHSLLLLSDGTVHACGDNSCGQLG-RRGVPHRKRPGLIQALETLNVDLLSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ P KV+ L+GI Q + G S+A
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG G+LG G+E FL S+ +P+ +K LEG+ + AAG HS
Sbjct: 141 LSQDGQVFSWGNNSHGQLGLGKE-----FL---SQESPQRVKSLEGIPLAQVAAGGAHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
+ +G + +G ++ N + +P I L + CG HT VLT
Sbjct: 193 ALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQD 252
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA--AISEGKILTW 364
G+++T+G N +G LG G P+ V+G + V Q+ CG HT + +++++
Sbjct: 253 GKVFTFGDNSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYHTLVYVYTTRQVISF 310
Query: 365 GWGGSHGTFS 374
G G S T S
Sbjct: 311 GRGPSDTTSS 320
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 25/275 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + DG ++ G NS GQ LG++ P ++ L + +
Sbjct: 22 ELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDLLS 79
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ + +TP +K L G+K+
Sbjct: 80 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEL--------NFTPMKVKALAGIKIIQV 131
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++G+V+ +G+ + ++ F +R + +P + +V GG H
Sbjct: 132 SCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLA-QVAAGGAH 190
Query: 300 TCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+ L+ G + WGSN G L + ++ V R G E V +SCG +HTA ++
Sbjct: 191 SFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLT 250
Query: 358 -EGKILTWGWGGS----HGTFSEDGHSSGGQLDRG 387
+GK+ T+G S HG +E G QL G
Sbjct: 251 QDGKVFTFGDNSSGQLGHGPTAE---KRGPQLVEG 282
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P+ A + ++CG H+L L++ G V++
Sbjct: 93 RVFA--WGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSW 150
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 151 GNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 210
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + +P+ P + L + + G E + +T GKV ++G SG+LG
Sbjct: 211 LAL---SGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLG 267
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
HG + G P+L++ ++G+ +I + + VY++ R V
Sbjct: 268 HGPTAEKRG---------PQLVEGIDGLVSQIDCGSY--------HTLVYVYTTRQV 307
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +G+LGLG S+ P + E L +A GGAH+ L+ +G + G N+ G
Sbjct: 150 WGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 209
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +P I LK+ VV IS G H++ +T DG+++ +G NS+GQLG G
Sbjct: 210 QLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHG 269
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
A K P VE + G+ ++ + V V +V+S+G G S
Sbjct: 270 PTAEK--RGPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFGRGPS 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
G +++ AA+G HS + +G V+ GD + ++ + H +RP LI L + +
Sbjct: 20 GAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLS 79
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG L+ +P +V+ + + QVSCG H+
Sbjct: 80 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKA-LAGIKIIQVSCGHYHS 138
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S +G++ +WG SHG
Sbjct: 139 LALSQDGQVFSWG-NNSHG 156
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 156/340 (45%), Gaps = 47/340 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P R++G + + IS G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G +Y G
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG GS D ++P V+ + V ++CG TAAI
Sbjct: 612 NGRLGHGSTDDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 650
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ +ACG H +T+ G V++ G G+LG + + P I L ++ ++ G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACG 368
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + +G LG GK + +P L G+ + G +
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLHISSISCGPWHT 427
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT GK+ ++G G G LGHG SI PR ++ L+G++ AA G H
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSI---------SIPREVESLKGLRTVRAACGVWH 478
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 479 TAAVVEVIIGNPNSNNNSSGKLFTWGDG--DKGRLGHGDKEARLVPTCVAALVEPNFCQV 536
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D P RV+G S+S V++++CG H
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEELACGAYHV 595
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 596 AVLTSRTEVYTWGKGAN 612
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + A G + VT G+V SWG GRLGHG +S
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
+ P+LI L + +++ A G H+ + +G +Y +GD + L G P +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT ++TS G+L+T+G G LG G D + P V+
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLR 468
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GK+ TWG G
Sbjct: 469 TV-RAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDG 506
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 18/177 (10%)
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
R+G +S I L P+ ++ + + V+ A G H+A + + G V+ +G+
Sbjct: 285 RVGSSFDSKIDSLL-------PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYG 337
Query: 268 DKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIG 323
++ + A P LI L E V CG YHTC +T G+LYTWG + +G LG G
Sbjct: 338 GRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHG 397
Query: 324 SIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
DV H P+RV GP + +SCG HTA + S GK+ T+G GTF GH
Sbjct: 398 K-DVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFG----DGTFGVLGH 449
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + +K LA GG H L L+ G VY+ G + G+LG N
Sbjct: 4532 ESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLG-HGNRSPCDR 4590
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ KEVV I+ G HS+ IT +GELY WGK G+LG G + P P VE
Sbjct: 4591 PRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQ--PRPKLVEA 4648
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L A G Q++ +T V SWG G G+LG G S P
Sbjct: 4649 LKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPMK 4699
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I+ L+G V G S + ++G VY +G ++ +H RRP +S L +
Sbjct: 4700 IETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKK 4759
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+V CG H T GE+++WG N+ G LG G+ + + P V + +++V+CG
Sbjct: 4760 VIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKK-INRVACG 4818
Query: 350 WKHTAAISEGKILTWG 365
H+ A S K ++ G
Sbjct: 4819 SAHSLAWSTNKAVSAG 4834
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 146/307 (47%), Gaps = 25/307 (8%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + L L + VQI G +T +G++Y G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG V +P ++ LS K+ A+ G S+A+T GKV SWG G G+L
Sbjct: 3526 NGRLGLGITTGTV-SVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +V+ A G HSA I NG +Y +G +
Sbjct: 3585 GH--------FSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGR 3635
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P + L + +V CG T LT G++Y+WG + G LG G
Sbjct: 3636 LGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGS 3695
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG----SHGTFSEDGHSS 380
+ + P V + V Q+ CG + + A+++ G++ TWG G HGT D H
Sbjct: 3696 EGCNVPHEVDR-LRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT---DAHVR 3751
Query: 381 GGQLDRG 387
Q+ G
Sbjct: 3752 KPQIVEG 3758
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 35/308 (11%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW--- 60
R +T++++Y +K K+ G +T + F+ WG GD G+LG SRW
Sbjct: 3542 RQITSLSQYVIK---KVAVHSGGRHSLALTTDGKVFS--WGEGDDGKLGHF---SRWNCD 3593
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + A + ++ +ACG +H+ +T G +Y GL ++G+LG +N L+P ++
Sbjct: 3594 KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTT-QLKPKQVKA 3652
Query: 121 LKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L E VVQ++ G + A+T +G++Y WG G+LG G ++ +P +V+ L
Sbjct: 3653 LAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG--GSEGCNVPHEVDRLRDQ 3710
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
Q G + S+A+T G+V +WG G RLGHG ++ + P++++ L+G
Sbjct: 3711 KVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV---------RKPQIVEGLKG 3761
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYS-EE 292
K+ A G LH + ++G+V+ +GD Q+GN R+P+L+ Y +
Sbjct: 3762 KKIVHVAVGALHCLAVTDSGQVFAWGDNDHG----QQGNGTTTVNRKPALVVLEGYKISK 3817
Query: 293 VVCGGYHT 300
V CG H+
Sbjct: 3818 VACGSSHS 3825
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 134/283 (47%), Gaps = 14/283 (4%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H + LT G V++ G D G+LG + + EP I+GL K+V +I G +S A+
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHE-EPALITGLSGKQVAKICCGSSYSVAL 686
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T +GE+Y WGK + G+LG G + P+ K I G Q++AVT G V
Sbjct: 687 TSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LG G TP++I++L G V G S + ++G
Sbjct: 747 YSWGDGDYGKLGRGGNDGC---------KTPKVIEKLMGQDVVRVYCGNQFSMALTKSGA 797
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G ++ +HAR P I L + ++ G H +T GELY WG NE
Sbjct: 798 VYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNE 857
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
G LG SI P + G ++ + V+CG T A + G
Sbjct: 858 QGQLGNPSISNFTEPTLIGGMEGKNIIG-VACGPTQTFAWTSG 899
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 21/331 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG +PV C A L GG TLF +T G V+ATG G
Sbjct: 4466 WGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLV-GGEQTLFAVTAEGKVFATGYGAGG 4524
Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG+ +E++ + + I + + + +++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 4525 RLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4584
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G A G S +T G++ +WG G GRLGHG
Sbjct: 4585 RSP--CDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD------ 4636
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + P+L++ L+ +V A +G + CI ++ V+ +GD K+ +
Sbjct: 4637 ---SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4693
Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+ P I L +V CG + LT G +YTWG + LG GS D + P +V
Sbjct: 4694 CKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVS 4753
Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
++ +D V+CG H A ++ G++ +WG
Sbjct: 4754 ALQNKKVID-VACGSLHCVACTDTGEVFSWG 4783
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 149/320 (46%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG + + P ++ ++ +K +A GG H+L LT G V++ G D
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG +P I LK K V I+ G HS+AIT +G+LY WG G+LG G
Sbjct: 3582 GKLGHFSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P +V+ L+ Q A G Q++A+T GKV SWG G G+LG G
Sbjct: 3641 NTTQLKP--KQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGG---- 3694
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P + L KV G S + ++G+V+ +G ++ H
Sbjct: 3695 -----SEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3749
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G+++ WG N++G G G+ V P V
Sbjct: 3750 VRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVV 3809
Query: 336 GPFSESPVDQVSCGWKHTAA 355
+ +V+CG H+ A
Sbjct: 3810 --LEGYKISKVACGSSHSIA 3827
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 26/313 (8%)
Query: 72 SLKALAC----GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
+L AL C GG+ +LF +T+ G VYA G G+LG+ G P +I+ L + V+
Sbjct: 3493 NLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVI 3552
Query: 127 Q---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+ + +G HS A+T DG+++ WG+ +G+LG + P +E L + A
Sbjct: 3553 KKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWN--CDKPRLIEALKSKRVRDIA 3610
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G S A+T G + +WG G GRLGHG +T++ P+ +K L +V
Sbjct: 3611 CGSSHSAAITSNGDLYTWGLGEYGRLGHGD---------NTTQLKPKQVKALAHERVVQV 3661
Query: 244 AAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
A G + + + G+VY +GD K+ P + +L + ++ CG
Sbjct: 3662 ACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQF 3721
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
+ LT G+++TWG + LG G+ + P+ V+G + V+ G H A+++
Sbjct: 3722 SLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEG-LKGKKIVHVAVGALHCLAVTDS 3780
Query: 359 GKILTWGWGGSHG 371
G++ WG HG
Sbjct: 3781 GQVFAWG-DNDHG 3792
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4572 WGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGR 4631
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ P + LK VV ++ +G + IT D ++ WG G+LG G
Sbjct: 4632 LGHGDSEDQP-RPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4689
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L G + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4690 -GSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHV-- 4746
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+ KV A G LH + G V+ +GD ++ N +
Sbjct: 4747 -------RRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQ 4799
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG H+
Sbjct: 4800 RPRLVASLLGKKINRVACGSAHS 4822
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 141/301 (46%), Gaps = 29/301 (9%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +AC L L++ G VY + ++ +L+ L G +EV++I++
Sbjct: 577 VQQIACSERCCLILSKAGKVY---------MLYYTSLSPTLQQLNGFG-DREVIRIASHP 626
Query: 133 H--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H +T DGE++ WG G+LG G P + LSG + G SV
Sbjct: 627 DGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH--EEPALITGLSGKQVAKICCGSSYSV 684
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFL 248
A+T G+V SWG G GRLGHG S + TP L+K +G ++ A +G
Sbjct: 685 ALTSNGEVYSWGKGNFGRLGHGS---------SEDQTTPMLLKFFKGHRIVDVACGSGDA 735
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSG 306
+ + ++G VY +GD K+ + + P +I KL + V CG + LT
Sbjct: 736 QTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKS 795
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
G +YTWG +N LG G+ D P++++ S V ++ G H AI+E L +GW
Sbjct: 796 GAVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAITEDGEL-YGW 853
Query: 367 G 367
G
Sbjct: 854 G 854
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 123/270 (45%), Gaps = 15/270 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD G+LG G ++ P + + + + CG ++++ LT G VY+ G +FG+
Sbjct: 643 WGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGR 702
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
L G SE+ + G + V +G + A+T G +Y WG G+LG G
Sbjct: 703 LGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGN 762
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P +E L G + G + S+A+T G V +WG G + RLGHG E
Sbjct: 763 DG--CKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHA--- 817
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I+ L KVK A G LH I E+G +Y +G ++ ++
Sbjct: 818 ------RHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTE 871
Query: 281 PSLISKLPYSEE--VVCGGYHTCVLTSGGE 308
P+LI + V CG T TSGG+
Sbjct: 872 PTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 121/254 (47%), Gaps = 16/254 (6%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ ++ WG N QLG G K +K I +PT + LS + Q G + VT GKV
Sbjct: 3462 IQTNVFCWGLNDKDQLG-GPKGSK-IKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVY 3519
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G +GRLG G + + R + + +IK KV + + G HS + +G+V
Sbjct: 3520 ACGEATNGRLGLGITTGTVSVPRQITSLSQYVIK-----KVAVHSGG-RHSLALTTDGKV 3573
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +G+ K+ + +P LI L ++ CG H+ +TS G+LYTWG E
Sbjct: 3574 FSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEY 3633
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG--GSHGT 372
G LG G P++V+ + V QV+CG + A EGK+ +WG G G G
Sbjct: 3634 GRLGHGDNTTQLKPKQVKA-LAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGR 3692
Query: 373 FSEDGHSSGGQLDR 386
+G + ++DR
Sbjct: 3693 GGSEGCNVPHEVDR 3706
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 124/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVI------------PI---------------------- 167
G+++ WG N GQLG G AKV PI
Sbjct: 4461 GQIWGWGHNHRGQLG-GVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATG 4519
Query: 168 -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
PT++E + +F K+ A+ G + +A++ G+V SWG G G+
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I L G +V AAG HSACI NG +Y +G
Sbjct: 4580 LGHGNRSPC---------DRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYG 4630
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + RP L+ L ++ CG T +T +++WG + G LG G
Sbjct: 4631 RLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4690
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P +++ V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4691 SDGCKVPMKIET-LQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRL----GHGSDDH 4745
Query: 384 LDR 386
+ R
Sbjct: 4746 VRR 4748
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP SA + + +ACG H + T+TG V++ G ND GQ
Sbjct: 4730 WGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQ 4789
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
LG L S L K++ +++ G HS A
Sbjct: 4790 LGDGTTNAIQRPRLVASLLGKKINRVACGSAHSLA 4824
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 163/353 (46%), Gaps = 47/353 (13%)
Query: 34 TLQRRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+L R+ AAL WG G G+LG P + + + +K++ACG T
Sbjct: 311 SLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTC 370
Query: 85 FLTETGCVYATGLNDFG-QLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVD 141
LT++G +YA G N +G LG E P RISG V + ++ G H++ ++
Sbjct: 371 ALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSS 430
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------- 194
G+L+ +G S G LG G + + P +VE L G+ K A G + A+
Sbjct: 431 GQLFTYGDGSFGVLGHGNLLS--VSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFK 488
Query: 195 ----GGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
GGK+ +WG G GRLGH E +L P + +L + + G +
Sbjct: 489 FNGVGGKLFTWGDGDKGRLGHADLEKKLL----------PTCVAQLVELDFDQVSCGRML 538
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-HARRPSLIS-----KLPYSEEVVCGGYHTCVL 303
+ + G+VY G ++ GN HA+ S++ K + +E+ G YH L
Sbjct: 539 TVALTNTGKVYTMGSSVHGQL----GNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAAL 594
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
TS G LYTWG NG LG+G+++ + P V+ + V ++CG TAAI
Sbjct: 595 TSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEA-LRDMQVQSIACGSNLTAAI 646
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
GCV N FG ++ + L L S + +V IS G H++ IT GE++ WG+
Sbjct: 277 GCVD----NQFGYHN-TKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGE 331
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG-R 208
S G+ LG K + P VE L G+ K A G Q+ A+T G++ +WG G
Sbjct: 332 GSRGK--LGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGAN 389
Query: 209 LGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG + RS S++ PR I L GV + A G H+A + +G+++ +GD +
Sbjct: 390 LGCEE--------RSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSF 441
Query: 268 DKMLFQEGN--HARRPSLISKLP--YSEEVVCGGYHTCVLTS-----------GGELYTW 312
+ GN +P + L + V CG +HT + GG+L+TW
Sbjct: 442 G--VLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTW 499
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G + G LG ++ P V E DQVSCG T A++ GK+ T G
Sbjct: 500 GDGDKGRLGHADLEKKLLPTCV-AQLVELDFDQVSCGRMLTVALTNTGKVYTMG 552
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 35/312 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G H +T+ G V+ G G+LG ++ S P + L V ++ G +
Sbjct: 310 ISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVS-SPKMVESLDGVHVKSVACGEYQ 368
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVT 193
+ A+T GELY WG+N G ++ ++ +P ++ L+G+ A G + V+
Sbjct: 369 TCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVS 428
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ ++G G G LGHG L S S+ P+ ++ L+G+ VK A G H+A I
Sbjct: 429 SSGQLFTYGDGSFGVLGHGN-------LLSVSQ--PKEVESLKGLLVKSVACGSWHTAAI 479
Query: 254 DE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHT 300
+ G+++ +GD ++ + P+ +++L ++V CG T
Sbjct: 480 VDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLT 539
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPER----VQGPFSESPVDQVSCGWKHTAAI 356
LT+ G++YT GS+ +G LG H+ ++ V+G E V ++S G H AA+
Sbjct: 540 VALTNTGKVYTMGSSVHGQLGNP-----HAKDKSIVIVEGKLKEEFVKEISSGSYHVAAL 594
Query: 357 -SEGKILTWGWG 367
S G + TWG G
Sbjct: 595 TSSGSLYTWGKG 606
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + +LG + + +T G+V WG G G+LGH + +
Sbjct: 295 LPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDV--------- 345
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
+P++++ L+GV VK A G + + ++G +Y +G+ L E + P I
Sbjct: 346 SSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRI 405
Query: 285 SKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
S P + V CG +HT +++S G+L+T+G G LG G++ + P+ V+
Sbjct: 406 SG-PLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVES-LKG 463
Query: 341 SPVDQVSCGWKHTAAISE------------GKILTWGWG 367
V V+CG HTAAI + GK+ TWG G
Sbjct: 464 LLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDG 502
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 198 VLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
VL WG G G +G + P+L++ + V + G H+A I +
Sbjct: 264 VLIWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKR 323
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
G V+ +G+ + K+ + P ++ L + + V CG Y TC LT GELY WG
Sbjct: 324 GEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGE 383
Query: 315 NENGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
N+ G +G + S P R+ GP + + V+CG HTA + S G++ T+G
Sbjct: 384 NKYGA-NLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYG----D 438
Query: 371 GTFSEDGH 378
G+F GH
Sbjct: 439 GSFGVLGH 446
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D ++P V+ + V V CG TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372
Query: 133 HHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWHT 430
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D L P RV+G ++ V+++SCG H
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 599 AVLTSRTEVYTWGKGAN 615
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + CG +HT ++TS G+L+T+G G LG G L P V+
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GKI TWG G
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+A + + G +Y +G+ + ++ +P LI L
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ DV H P+RV GP V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
+SCG HTA + S G++ T+G G+F GH L
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFG----DGSFGVLGHGDRASL 458
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D ++P V+ + V V CG TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372
Query: 133 HHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWHT 430
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ R P+ ++ L P +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D L P RV+G ++ V+++SCG H
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 599 AVLTSRTEVYTWGKGAN 615
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + CG +HT ++TS G+L+T+G G LG G L P V+
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GKI TWG G
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG 509
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+A + + G +Y +G+ + ++ +P LI L
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ DV H P+RV GP V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
+SCG HTA + S G++ T+G G+F GH L
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFG----DGSFGVLGHGDRASL 458
>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
Length = 1697
Score = 127 bits (318), Expect = 1e-26, Method: Composition-based stats.
Identities = 103/322 (31%), Positives = 155/322 (48%), Gaps = 26/322 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
++CG +H+ F+TE G ++ G N+ GQLG+ G +P+ + LK E Q ++ G H
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIK-GPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ T GE+ G NS+GQLGLG + + C K + G S A+T
Sbjct: 98 TLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI-KLLSAGDHTSAALTE 156
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
G++ WG +G+LG G +S L L +EL G + + G+ HSA +
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHAL------------LPQELNMGQSIHWVSCGYRHSALV 204
Query: 254 DENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
++G VY FG+ A ++ Q NH+ P + L +V CGG HT LT ELY
Sbjct: 205 TDSGDVYTFGESADGRLGLSAHQLANHSY-PQRVESLRSVLQVACGGKHTLALTED-ELY 262
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
+G E G LG+G + + G F + V V+CG +H+A I++ +L G H
Sbjct: 263 CFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSALITDSGLLYTFGDGRH 322
Query: 371 GTFSEDGHSSGGQLDRGQLTPS 392
G GH G + Q TP+
Sbjct: 323 GKL---GH--GDENFTNQFTPT 339
Score = 121 bits (303), Expect = 7e-25, Method: Composition-based stats.
Identities = 85/256 (33%), Positives = 139/256 (54%), Gaps = 21/256 (8%)
Query: 121 LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
LK ++ V IS G HS+ +T G L+++G N+ GQLGL K P+ KV L G
Sbjct: 31 LKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERA 88
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF--LRSTSEYTPRLIKELEG 237
+ A G + ++ T G++L+ G G+LG G + + F LR +Y P
Sbjct: 89 QSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAP-------- 140
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
+K+ +AG SA + E+GR++++GD + ++ F +HA P ++ V CG
Sbjct: 141 --IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWVSCGY 198
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVL-HS-PERVQGPFSESPVDQVSCGWKHTAA 355
H+ ++T G++YT+G + +G LG+ + + HS P+RV+ S V QV+CG KHT A
Sbjct: 199 RHSALVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRVE---SLRSVLQVACGGKHTLA 255
Query: 356 ISEGKILTWGWGGSHG 371
++E ++ +G GG G
Sbjct: 256 LTEDELYCFG-GGEFG 270
Score = 111 bits (278), Expect = 6e-22, Method: Composition-based stats.
Identities = 103/352 (29%), Positives = 159/352 (45%), Gaps = 23/352 (6%)
Query: 7 TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
+A ++ +LK DI + G + R F ++G+ + G+LGL +PV
Sbjct: 24 SAPSRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVK 81
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEV 125
+ +++ACG HTL T G + A G N GQLG+ N S + LR +
Sbjct: 82 VLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI 141
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+S G H S+A+T DG L++WG NS GQLG G + ++P E G + G
Sbjct: 142 KLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----QELNMGQSIHWVSCG 197
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ S VT G V ++G GRLG L + + P+ ++ L V +++A
Sbjct: 198 YRHSALVTDSGDVYTFGESADGRLG-------LSAHQLANHSYPQRVESLRSV-LQVACG 249
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
G H+ + E+ +Y FG ++ L A P + V CG H+ +
Sbjct: 250 G-KHTLALTED-ELYCFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSAL 307
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVSCGWKH 352
+T G LYT+G +G LG G + + +P Q F E V V+CG H
Sbjct: 308 ITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQ-RFFEYSVMTVACGSSH 358
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 145/323 (44%), Gaps = 18/323 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3954 GYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V ++ G HHS+AIT G LY WGK G+LG G
Sbjct: 4014 KLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4073
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4074 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4125
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4126 ---SDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVR 4182
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
RP ++ L + + G H + GE++TWG N+ G LG G+ L P V
Sbjct: 4183 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHA- 4241
Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
+ +V+CG HT A S K
Sbjct: 4242 LQGKKITRVACGSAHTLAWSTMK 4264
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 152/319 (47%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2967 GEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDG 3026
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P I LK K + ++ G HS+AIT GELY WG G+LG G
Sbjct: 3027 KLG-HGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3085
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3086 NTQLKP--KLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3138
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP L+ L G+ V G S + + G V+ +G ++ +H
Sbjct: 3139 ----SDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3194
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G GS V P V
Sbjct: 3195 RKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3254
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 3255 -LDDARVNRVSCGSSHSIA 3272
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 156/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3901 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3959
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3960 RLGIGGTDSVMMPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4017
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4018 GNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4071
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4072 -----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4126
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ D + P +
Sbjct: 4127 DGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRK 4186
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V + ++ G H A S+ G++ TWG
Sbjct: 4187 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG 4218
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 25/267 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3020 WGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + L + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3080 LGHGDT-NTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3138
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3139 SDGCYTPL--LVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3194
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3195 -------RKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGST 3243
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3244 IVNKKPSLVHELDDARVNRVSCGSSHS 3270
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 143/286 (50%), Gaps = 25/286 (8%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
VY GLND QLG + L S K + V I+ G ++ +G+LY G+ +
Sbjct: 2911 VYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2970
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG P P + LS K+ A+ G + ++A+T G+V SWG G G+L
Sbjct: 2971 NGRLGLGDDGNACEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKL 3028
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS+ PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3029 GHGNCSSL---------DKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + N +P L+ L +V CG T LT+ G +Y+WG + G LG G
Sbjct: 3080 LGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3139
Query: 326 DVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
D ++P +R+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 3140 DGCYTPLLVDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKG 3181
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 169/348 (48%), Gaps = 26/348 (7%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGC 91
T Q +WG D +LG G S+ + PV + K +A GG+ TLF+ ++ G
Sbjct: 2905 TPQHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSESLSKLKPVHIA-GGSKTLFVVSQEGK 2962
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWG 148
+YA G G+LG+ ++ G + EP I L + V++ + +G H+ A+T DG ++ WG
Sbjct: 2963 LYACGEGTNGRLGLGDD-GNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWG 3021
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ +G+LG G ++ + P +E L + A G S A+T G++ +WG G GR
Sbjct: 3022 EGEDGKLGHGNCSS--LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRA 266
LGHG + ++ P+L++ L G +V A G + + +G VY +GD
Sbjct: 3080 LGHGD---------TNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGD 3130
Query: 267 VDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
K+ + P L+ +L ++ CG + LT GE++TWG + LG G+
Sbjct: 3131 FGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3190
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ P V+G V V+ G H A+++ G++ WG HG
Sbjct: 3191 DHHVRKPTLVEG-LRGKKVIHVAVGALHCLAVTDTGQVYAWG-DNDHG 3236
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 148/343 (43%), Gaps = 40/343 (11%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
S TLQ A WG+ +G G GS P C A + +K L C + L+ +G
Sbjct: 432 SQTLQEVLA--WGSVKFG--GTGS-----SPFYCDAIAELGIKQLCCTERALMILSTSGN 482
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY---HHSSAITVDGELYMWG 148
VY Q P R+ G + V + + H A+T D +Y WG
Sbjct: 483 VYMMYYGSETQY-----------PQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWG 531
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G + P +E L A G S A++ G++ +WG G GR
Sbjct: 532 NGDGGRLGHGDRTW--YEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRA 266
LGHG ++ P L+ L G + A +G + C+ +G V+ +GD
Sbjct: 590 LGHGNSDDVM---------VPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
K+ N ++ P ++ KL +V CGG + LT+ GE+YTWG E LG G+
Sbjct: 641 YGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGN 700
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+ + P+ ++ V ++ G H A++E + L +GWG
Sbjct: 701 EEHVRYPKAIEA-LKTKKVKELCVGSLHVLALTEDQ-LVYGWG 741
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G +Y G N GQLG E L L S VQ++ G A+T DG++Y G
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3954
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
+ G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3955 YGAVGRLGIG--GTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4012
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4013 GKLGHGNR---LSYDR------PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
++ + P L+ L + +V CG T +T +++WG + G LG
Sbjct: 4064 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4123
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G D P +++ + V +V CG + + A++ G I TWG G H
Sbjct: 4124 GGSDGCKVPMKIES-LAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYH 4171
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4007 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGR 4066
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4067 LGHGDSED-QLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4124
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4125 -GSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHV-- 4181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
PR + L+G K+ A G LH + G V+ +GD D+ +G
Sbjct: 4182 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDN--DEGQLGDGTTCA 4232
Query: 279 -RRPSLISKLPYSE--EVVCGGYHT 300
+RP L+ L + V CG HT
Sbjct: 4233 LQRPRLVHALQGKKITRVACGSAHT 4257
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LTE VY+ G D G+LG + Y L S + K + I+ G +S+A++
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALS 574
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
+GELY WG+ + G+LG G + + +PT V L+G A G Q++ VT G
Sbjct: 575 SNGELYTWGRGNYGRLGHGN--SDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGI 632
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G TP+++ +L + V G SA + G
Sbjct: 633 VFSWGDGDYGKLGRGG---------CNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 683
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ H R P I L +E+ G H LT +Y WG N
Sbjct: 684 EVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRN 743
Query: 316 ENG 318
+ G
Sbjct: 744 DYG 746
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 123/272 (45%), Gaps = 21/272 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+VQ +Y+WG N QLG G K +K I +P E LS + A
Sbjct: 2891 EIVQEQASSQRGVETPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSESLSKLKPVHIA 2948
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + V+ GK+ + G G +GRLG G + + P+ I L +K
Sbjct: 2949 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNAC---------EPKPIPFLSQYVIKKV 2999
Query: 244 A--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
A +G H+ + ++GRV+ +G+ K+ + +P LI L +V CG H
Sbjct: 3000 AVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGH 3059
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAI 356
+ +TS GELYTWG E G LG G + P+ VQ + V QV+CG + A
Sbjct: 3060 SAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQR-VIQVACGSRDAQTMALT 3118
Query: 357 SEGKILTWGWG--GSHGTFSEDGHSSGGQLDR 386
++G + +WG G G G DG + +DR
Sbjct: 3119 ADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDR 3150
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 109/248 (43%), Gaps = 15/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + + ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 530 WGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589
Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N + P +S L + V +G + +T G ++ WG G+LG G
Sbjct: 590 LG-HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG- 647
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L I + G + S A+T G+V +WG G + RLGHG E +
Sbjct: 648 -GCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV-- 704
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ I+ L+ KVK G LH + E+ VY +G ++ G
Sbjct: 705 -------RYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVS 757
Query: 280 RPSLISKL 287
P+L L
Sbjct: 758 EPTLCPTL 765
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG G E + + P L + L ++ G +
Sbjct: 3894 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 3944
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+VY G AV ++ + P+L+ + + V GG H L+S G +
Sbjct: 3945 TADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4004
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
Y+WG ++G LG G+ P+ ++ VD V+CG H+AAI S G + TWG
Sbjct: 4005 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-VACGGHHSAAITSAGWLYTWG--- 4060
Query: 369 SHGTFSEDGHSSGGQLDRGQLTP 391
G + GH QLTP
Sbjct: 4061 -KGRYGRLGHGDS----EDQLTP 4078
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + A + + +ACG AHTL
Sbjct: 4217 WGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTL 4258
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 27/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +YG+LGLG + R P + A++ G H+L + G +++ G ND GQ
Sbjct: 296 WGDNEYGQLGLGDTDERHAPEQVGS--NTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQ 353
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + + P ++ G + +S G HS A+ DG L +WG N GQLGLG +
Sbjct: 354 LGLGDTADRN-APEQV-GADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVS 411
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P SGI G +VAV G + +WG G+LG LG +R
Sbjct: 412 RDAPVP----IASGI---ALVAGRNHTVAVNPDGTLRAWGDNEYGQLG-------LGVMR 457
Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y + + G + F HS + ++G ++ +G ++ + + P
Sbjct: 458 ----YIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATP 513
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ V YHT + + G L+ WG N +G LG+ + H+PERV S++
Sbjct: 514 EQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDTNDRHTPERVG---SDT 570
Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGW 366
VS G HT+A+ +G + WGW
Sbjct: 571 DWATVSVGQSHTSAVKPDGTLWAWGW 596
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 148/325 (45%), Gaps = 25/325 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LGLG + R P + A+ HTL + G ++A G N GQ
Sbjct: 494 WGRNNYGQLGLGDTDDRATPEQVGSHTD--WAAVNAASYHTLAVKNDGTLWAWGRNSSGQ 551
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+S+ P R+ G + +S G H+SA+ DG L+ WG N GQLGLG +
Sbjct: 552 LGLSD-TNDRHTPERV-GSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD 609
Query: 163 KVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P E + G A + G +VAV G + +WG G+LG G S +
Sbjct: 610 RLSP-----EQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPV 664
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ S+ ++A+G+ + + +G ++ +G+ ++ + ++ P
Sbjct: 665 QVGSDTD----------WAAVSASGY-RTLAVKADGTLWAWGENNNGQLGLGDTDNRNTP 713
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + V G +HT L+ WG N +G LG+G D +P +V +E+
Sbjct: 714 AQVGNDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDAPVQVG---NET 770
Query: 342 PVDQVSCGWKHT-AAISEGKILTWG 365
VS G HT A +S+G + WG
Sbjct: 771 DWSTVSGGGYHTLATMSDGTLRAWG 795
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 150/332 (45%), Gaps = 30/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDF 100
WG+ +YG+LGLG + V S S A GG+ H+L L + G ++A G N++
Sbjct: 443 WGDNEYGQLGLGVMR---YIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNY 499
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + + P ++ G + ++ +H+ A+ DG L+ WG+NS+GQLGL
Sbjct: 500 GQLGLGDTDDRAT-PEQV-GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDT 557
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +V + T ++G + AV G + +WG G+LG G S
Sbjct: 558 NDR--HTPERVGSDTDWAT--VSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD---- 609
Query: 221 LRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
RL E G + A G H+ + +G ++ +G ++ +
Sbjct: 610 ---------RLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDR 660
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + V GY T + + G L+ WG N NG LG+G D ++P +V
Sbjct: 661 HAPVQVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQVG--- 717
Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
+++ VS G HT A E L W WG +H
Sbjct: 718 NDADWAAVSTGLFHTLAFKEDDTL-WAWGRNH 748
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 31/306 (10%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C+AF LA G HT+ + G ++A G N +G+LG+ + + P ++ G
Sbjct: 120 VECTAF-----PVLAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDV-PEQV-GTD 172
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ +S G H+ A+ +G L+ WG++ G++GLG + P G+
Sbjct: 173 SDWTAVSAGRDHTVAVKANGTLWAWGRS--GRIGLGDSGDRDEPEQV------GVDNDWI 224
Query: 183 AL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
AL G +VAV G + +WG +G+LG G + YTP +
Sbjct: 225 ALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD---------TNHHYTPTQVGTDTDWAK 275
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
KI+A G HS + +G ++ +GD ++ + + P + + G H+
Sbjct: 276 KISA-GRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHS 334
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
+ + G L++WG N++G LG+G ++PE+V +++ D VS G +H+ A+ ++G
Sbjct: 335 LAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVG---ADTDWDLVSAGGEHSLAVKADG 391
Query: 360 KILTWG 365
++ WG
Sbjct: 392 TLMVWG 397
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 140/330 (42%), Gaps = 36/330 (10%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFA-------ALWGNGDYGRLGLGSLESRWRPVVCSAF 68
D + ++G W + + R LW G GR+GLG R P
Sbjct: 161 DDRDVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGV- 219
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+ AL+ GG+HT+ + G ++A G N+ GQLG+ + + P ++ +I
Sbjct: 220 -DNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD-TNHHYTPTQVGTDTDWAKKI 277
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GF 186
S G HS A+ DG L+ WG N GQLGLG + P G T AA+ G
Sbjct: 278 SAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQV------GSNTDWAAISAGR 331
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV--KIAA 244
S+AV G + SWG SG+LG G + R E G + +
Sbjct: 332 RHSLAVKADGSLWSWGYNDSGQLGLGDTAD-------------RNAPEQVGADTDWDLVS 378
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
AG HS + +G + ++G + ++ G+ R + + + +V G HT +
Sbjct: 379 AGGEHSLAVKADGTLMVWGLNHLGQLGL--GDTVSRDAPV-PIASGIALVAGRNHTVAVN 435
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERV 334
G L WG NE G LG+G + + +P +
Sbjct: 436 PDGTLRAWGDNEYGQLGLGVMRYIVTPSQT 465
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 24/296 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++ G +HT + G ++A G N +GQ
Sbjct: 544 WGRNSSGQLGLSDTNDRHTPERVGS--DTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQ 601
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L P ++ G + + +STG HH+ A+ DG L+ WG N GQLGLG +
Sbjct: 602 LGLGD-TSDRLSPEQVGG-ESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSD 659
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ + + +A G+ +++AV G + +WG +G+LG G
Sbjct: 660 RHAPVQVGSDT---DWAAVSASGY-RTLAVKADGTLWAWGENNNGQLGLGD--------- 706
Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + TP + G AA G H+ E+ ++ +G ++ + ++
Sbjct: 707 TDNRNTPAQV----GNDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDA 762
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + V GGYHT S G L WG N +G LG ++ P+ V G
Sbjct: 763 PVQVGNETDWSTVSGGGYHTLATMSDGTLRAWGLNTSGQLGQRTM-WFDQPQEVPG 817
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 142/326 (43%), Gaps = 31/326 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YGRLGLG + R V A++ G HT+ + G ++A G + G+
Sbjct: 147 WGRNGYGRLGLGDTDD--RDVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRS--GR 202
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G+ ++ G EP ++ G+ + + +S G H+ A+ DG L+ WG+N+ GQLGLG
Sbjct: 203 IGLGDS-GDRDEPEQV-GVDNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGDTNH 260
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P + + K+ + G S+AV G + +WG G+LG L
Sbjct: 261 HYTPTQVGTDT---DWAKKISAGRRHSLAVKADGSLWAWGDNEYGQLG----------LG 307
Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T E R E G AA AG HS + +G ++ +G ++ +
Sbjct: 308 DTDE---RHAPEQVGSNTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQLGLGDTADRNA 364
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + + V GG H+ + + G L WG N G LG+G +P + +
Sbjct: 365 PEQVGADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVSRDAPVPIASGIA- 423
Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWG 365
+ G HT A++ +G + WG
Sbjct: 424 -----LVAGRNHTVAVNPDGTLRAWG 444
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 148/328 (45%), Gaps = 31/328 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG SR PV + S AL G HT+ + G + A G N++G
Sbjct: 395 VWGLNHLGQLGLGDTVSRDAPVPIA-----SGIALVAGRNHTVAVNPDGTLRAWGDNEYG 449
Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + Y + P + ++G V + ++HS + DG L+ WG+N+ GQLGLG
Sbjct: 450 QLGLGV-MRYIVTPSQTVTGSAWAAVNGGS-FNHSLGLRDDGTLWAWGRNNYGQLGLGDT 507
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P G T AA+ ++AV G + +WG SG+ L
Sbjct: 508 DDRATPEQV------GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQ---------L 552
Query: 219 GFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
G + +TP R+ + + V + G H++ + +G ++ +G ++ + +
Sbjct: 553 GLSDTNDRHTPERVGSDTDWATVSV---GQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD 609
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + V G +HT + + G L+ WG N G LG+G H+P +V
Sbjct: 610 RLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGSD 669
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWG 365
+ V + G++ A ++G + WG
Sbjct: 670 TDWAAV--SASGYRTLAVKADGTLWAWG 695
>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
Length = 364
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 28/342 (8%)
Query: 43 WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG YG+LGLG + + + + ++ A+A G HTL L + G VY G
Sbjct: 6 WGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYCCGW 65
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG S++ +L+ +I LK +VQIS G+ S+A++ G+ ++WG NS QLG
Sbjct: 66 NSKGQLGTSDD---TLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSYTQLG 122
Query: 157 LGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K+ IP++++ + T KQ + G S + G +L G G G+LG G
Sbjct: 123 L-SKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDN 181
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+L + + +LE + V I A+G H+ + E+G VY +G+ ++
Sbjct: 182 FDDNNYLSISK------VPDLEDI-VSI-ASGQHHTVVLKEDGTVYSWGENKYGQLGIDP 233
Query: 275 G-NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+++ P I V G HT L+ GE++TWG N G LG +V + PE+
Sbjct: 234 NISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG-AQREVTYKPEK 292
Query: 334 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG--GSHGT 372
+ G V Q+S G +H A++ +GK+ WGW GS GT
Sbjct: 293 IPGL---KDVTQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGT 331
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 23/284 (8%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYM 146
+Y+ G N +GQLG+ + P ++ + +V I+ G H+ + +G +Y
Sbjct: 3 LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYC 62
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQLG K+ T++E L G Q + G++ S AV+ GK WG
Sbjct: 63 CGWNSKGQLGTSDDTLKI----TQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSY 118
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG + + G + S + + +L + V + G HSA ++++G + + G +
Sbjct: 119 TQLGLSKSITCTG-IPSRLQVSQKLATGFKQV-----SCGLRHSAMLNKDGGLLVAGTGS 172
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + ISK+P E++V G +HT VL G +Y+WG N+ G LGI
Sbjct: 173 KGQLGLGDNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGID 232
Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+I P + ++ + V GW HTAA+S+ G++ TWG
Sbjct: 233 PNISNSFVPMEI---LHDANLGSVYAGWTHTAALSKSGEVFTWG 273
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 2 LGRSLTAM---TKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-WGNGDYGRLGLG-SL 56
L +S+T ++ + Q + G K C S+ L + L G G G+LGLG +
Sbjct: 123 LSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDNF 182
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ + + + ++A G HT+ L E G VY+ G N +GQLGI NI S P+
Sbjct: 183 DDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNISNSFVPM 242
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
I + + G+ H++A++ GE++ WG+NS GQLG + +V P K+ L
Sbjct: 243 EILH-DANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQR---EVTYKPEKIPGLKD 298
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ Q ++G E ++AVT GK+ WG G G G ++ + + T + R +K
Sbjct: 299 V--TQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDKTDV---CKPTQIFANRKVK 350
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 42 LWGNGDYGRLGLG-SLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLN 98
+WGN Y +LGL S+ P +K + K ++CG H+ L + G + G
Sbjct: 112 VWGNNSYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTG 171
Query: 99 DFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG+ +N + L IS + +++V I++G HH+ + DG +Y WG+N GQLG
Sbjct: 172 SKGQLGLGDNFDDN-NYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLG 230
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P +E L G+ + A++ G+V +WG G+LG +E +
Sbjct: 231 IDPNISNSF-VP--MEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQREVT 287
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
Y P I L+ V + G H+ + ++G+++++G
Sbjct: 288 ----------YKPEKIPGLK--DVTQLSVGSEHNLAVTKDGKLFVWG 322
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 160/341 (46%), Gaps = 32/341 (9%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEEEQILTPSRIPWKP-------DSAVNQIACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + PL+I L+ V+ QI+ G HS A++ G+++ WG N
Sbjct: 59 ACGSNDYSQLGHELP---TKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG ++ +P V L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGHASD-QDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVS 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ + TP + L G+ V A G HS I ++ V+ +G ++
Sbjct: 175 SPNDL------QQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ + P+ + L V CG + LT G ++T G+ G LG G
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEML 288
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
P R+ S + QV+CG +HT A+ S G+I +G G S
Sbjct: 289 P-RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSS 328
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP+ + + + +ACG H++ L+E G V++ G N+ GQL
Sbjct: 61 GSNDYSQLG-HELPTK-RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+
Sbjct: 119 GHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPND 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ L GI A G S ++ V WG G+LG E
Sbjct: 179 LQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLP 289
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
++ +L S +V CG HT L S G +Y +G +G LG + L+ P+ V GP
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQLVIGP 348
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 19/234 (8%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P I EL+ + A G HS + E G+V+ +
Sbjct: 62 SNDYSQLGHELPTK-----------RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSW 110
Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
GD ++ + + + P ++ L ++ CG H+ LT GELY+WGSN G
Sbjct: 111 GDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQ 170
Query: 320 LGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
LG+ S + L ++P R+ PV ++CG H+ IS+ + +GWG ++
Sbjct: 171 LGVSSPNDLQQSNTPMRLTTLLG-IPVSAIACGGNHSFLISKSSAV-FGWGRNN 222
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQ LG +
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQ--LGTRN 335
Query: 162 AKVIPIPTKV 171
K + +P V
Sbjct: 336 TKSLNLPQLV 345
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 155/340 (45%), Gaps = 47/340 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ ++CG HT +T +G +Y G +F
Sbjct: 332 WGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNF 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P +I+G + V I+ G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGNEVSHWI-PKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRGS--VTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L + G + + +G VY G
Sbjct: 509 GRLGHGDKETKL---------VPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGS-- 557
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG
Sbjct: 558 --PVYGQLGN----PHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 611
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D +SP V+ + V ++CG TAAI
Sbjct: 612 NGRLGHGDTDDRNSPTLVEA-LKDKQVKSIACGTNFTAAI 650
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 157/320 (49%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G ++ G G+LG + ++ L+P + L ++ +S
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDV---LQPKLVDALGNTNIELVS 366
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + IP K+ L GI A G
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP--KKINGPLEGIHVSSIACGP 424
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 425 WHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVT---------MPREVESLKGLRTVRAACG 475
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ + P+ ++ L P
Sbjct: 476 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKETKLVPTCVAALVDPNF 533
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
V CG T LT+ G +YT GS G LG D P RV+G S+S V++++CG
Sbjct: 534 CRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPVRVEGKLSKSFVEEIACGA 592
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 593 YHVAVLTSRTEVYTWGKGAN 612
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + VT G++ +WG GRLGHG +S +L
Sbjct: 298 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVL-------- 349
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+L+ L +++ + G H+ + +G +Y +GD + L GN P I
Sbjct: 350 -QPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKI 408
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT V+TS G+L+T+G G LG G + P V+
Sbjct: 409 NGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLR 468
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GK+ TWG G
Sbjct: 469 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 506
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G ++ +G+ + ++ + +P L+ L
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ +V H P+++ GP V
Sbjct: 359 NTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWIPKKINGPLEGIHV 417
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT-PSE 393
++CG HTA + S G++ T+G GTF GH DRG +T P E
Sbjct: 418 SSIACGPWHTAVVTSAGQLFTFG----DGTFGVLGHG-----DRGSVTMPRE 460
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 156/336 (46%), Gaps = 31/336 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG GD GRLG + R+ P V + ++ +ACGG+HT+ L G V++ G G
Sbjct: 166 LWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQG 225
Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N+ PL I G ++ VV ++ +HS+ I+ DG LY WGK + LG
Sbjct: 226 CLG-HGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPFLGYMD 283
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L G Q A G ++ + G+V S+G G LG G + +I
Sbjct: 284 DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAIT- 342
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L V + + G HSA IDE+G ++++G A ++
Sbjct: 343 --------KPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQL-----GQGE 387
Query: 280 RPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHS 330
SL S P + E+V CG HT +T+ G Y WG N + G+ S L S
Sbjct: 388 PKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSS 447
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
P + P P Q++CG T ++ G++ TWG
Sbjct: 448 PRGIVLPSGIRPT-QINCGANFTVLVTSIGQLFTWG 482
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 143/335 (42%), Gaps = 53/335 (15%)
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKV 164
E + L +R S + ++ +++ G + + D +LY+WG G+LG K K
Sbjct: 125 EAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLG--HKDDKP 182
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH------------- 211
+P VE L G A G ++A+ G+V SWGAG G LGH
Sbjct: 183 RFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMID 242
Query: 212 ------------------------------GQESSILGFLRS--TSEYTPRLIKELEGVK 239
G+ LG++ T + PRL+ L G +
Sbjct: 243 GPLRDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTR 302
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ A G H+ IDE GRVY FG ++ +P+++ L +V CG +H
Sbjct: 303 IVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNLVSICKVSCGRHH 362
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
+ + G L+ WG G LG G L SP V G F++ P++ VSCG+ HTAAI+
Sbjct: 363 SAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNG-FNDQPLEDVSCGYGHTAAITAN 421
Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLD--RGQLTPS 392
+ + WG + + S G+L RG + PS
Sbjct: 422 GV-AYCWGDNASSQCGVPSSVYGELSSPRGIVLPS 455
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +G LG G ++ +P + S+ ++CG H+ + E G ++ G GQ
Sbjct: 325 FGINKFGELGQGHDKAITKPTMVPNLV--SICKVSCGRHHSAAIDEDGVLFMWGWGARGQ 382
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E P ++G + ++ +S GY H++AIT +G Y WG N++ Q G+
Sbjct: 383 LGQGEPKSL-FSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSV 441
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P + SGI Q G +V VT G++ +WG SG+LG+G+
Sbjct: 442 YGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFS-- 499
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
P ++ L +VK+ A G H C+
Sbjct: 500 ------QPMPVESLSEKRVKMVACGEDHIGCL 525
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 20/304 (6%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
A G H L L V+A G N GQLG G EP++ + + V +S G HS
Sbjct: 35 ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQ-ALVNLPVDLVSCGKEHS 93
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S+GQLG GK ++ IP K++ L+GI Q + G+ S+A++
Sbjct: 94 LAVCHKGKVFAWGVGSDGQLGTGK-FEEICFIPQKIKALTGIKIIQISCGYYHSLALSKD 152
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V SWG G+LG GQE S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 153 GQVFSWGKNSHGQLGLGQEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 204
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
+G + +G+ + ++ F N + +P + L + CG HT VLT +++
Sbjct: 205 SGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVF 264
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWGG 368
T+G N G LG + P+ V+G PV Q+ CG HT A + G+++++G
Sbjct: 265 TFGDNSFGQLGHNGVSQTTGPQLVEG--IGGPVSQIDCGSYHTLAYVYTTGQVVSFGREP 322
Query: 369 SHGT 372
SH +
Sbjct: 323 SHTS 326
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 12/274 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +P A + ++CG H+L + G V+A G+ GQL
Sbjct: 54 GDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQL 113
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + P +I L +++QIS GY+HS A++ DG+++ WGKNS+GQLGLG++
Sbjct: 114 GTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFP 173
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG +G+L + ++
Sbjct: 174 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLV---- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR + L+ + V + G+ H+A + +N +V+ FGD + ++ + P
Sbjct: 229 --QSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTGPQ 286
Query: 283 LISKL--PYSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + P S ++ CG YHT + + G++ ++G
Sbjct: 287 LVEGIGGPVS-QIDCGSYHTLAYVYTTGQVVSFG 319
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 23/273 (8%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G H+ + + ++ G NS GQ LG++ A P ++ L + +
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQ--LGRRGAPSGKQPEPIQALVNLPVDLVSC 88
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV GKV +WG G G+LG G+ I + P+ IK L G+K+ +
Sbjct: 89 GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEIC--------FIPQKIKALTGIKIIQIS 140
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
G+ HS + ++G+V+ +G + ++ L QE P + L P + +V GG H+
Sbjct: 141 CGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLA-QVAAGGAHS 199
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAIS 357
L+ G + WG+N G L +VL + P V G V +SCG++HTA ++
Sbjct: 200 FALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSV-GALKNLGVVYISCGYEHTAVLT 258
Query: 358 EG-KILTWGWGGSHGTFSEDG--HSSGGQLDRG 387
+ ++ T+G S G +G ++G QL G
Sbjct: 259 QNDQVFTFG-DNSFGQLGHNGVSQTTGPQLVEG 290
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G E + P A + ++CG H+L L++ G V++ G N G
Sbjct: 105 WGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHG 164
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQL
Sbjct: 165 QLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGN 224
Query: 161 AAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V P V L + + G+E + +T +V ++G G+LGH S G
Sbjct: 225 NVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTG 284
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+L++ + G +I + A + G+V FG +E +H
Sbjct: 285 ---------PQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFG---------REPSHTS 326
Query: 280 RPS 282
P+
Sbjct: 327 NPT 329
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 20/335 (5%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG+G + P C+ F LK + CGG H++FL G VY G N G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ + P + L +++ +S G HS A+ G+++ WG GQLGLG
Sbjct: 64 QLGHNKP---GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTT 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V IP ++ L Q G + +A++ G++ +WG SG+LG G+
Sbjct: 121 ETAV-RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEP---- 175
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S+ P+ +K L G+ + AG HS + +G V+ +G ++ +
Sbjct: 176 ----SKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV 231
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P I K S++VV CG HT LT G L+T+G G LG GS P RV
Sbjct: 232 PCHI-KFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL-E 289
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHG 371
+ V Q++CG HT A + + +G SHG
Sbjct: 290 LMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHG 324
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL ++ R P + ++CG HT LT+ G ++ G +GQ
Sbjct: 213 WGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A G +Y +G NS+GQLG G
Sbjct: 273 LG-HGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVL 331
Query: 161 AAKVIPIPTKVECLSG 176
+A P P K LSG
Sbjct: 332 SADKSPYPLKTSFLSG 347
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG G E + + R+ + +T R +KE+ G HS + +G
Sbjct: 1 MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEI--------VCGGQHSVFLLHDG 52
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ P + L + V CG H+ + G+++ WG+
Sbjct: 53 SVYTCGSNSCGQL--GHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAG 110
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
E G LG+G+ + R+ + + QV CG +H A+S +G++ TWG S
Sbjct: 111 EEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTS 165
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 161/341 (47%), Gaps = 32/341 (9%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LG+G +E W+P L+ +ACG HTLFLT G VY
Sbjct: 6 WGNASHGQLGMGGIEDEQILIPSQIPWKP-------DAPLRQIACGHRHTLFLTANGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
A G ND QLG N+ + PL I L+ VV I+ G HS A+T G++ WG N
Sbjct: 59 ACGNNDQAQLG--HNLP-TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG + +I +P + L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVK 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ S Y RL L G+ + A G HS I ++ V+ FG ++
Sbjct: 175 PPQEL-----SHCNYPLRLTT-LLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228
Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ ++ P+ + L V CG + LT+ G ++T G+ G LG GS
Sbjct: 229 NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML 288
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
P R+ S + QV+CG +HT A+ S G++ +G G S
Sbjct: 289 P-RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 328
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 143/306 (46%), Gaps = 17/306 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D +LG +L ++ RP++ + + + A+ACG H++ LTE G V + G ND GQL
Sbjct: 61 GNNDQAQLG-HNLPTK-RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
G S + P I L K VVQI+ G +HS A+T GELY WG N GQLG+ +
Sbjct: 119 GQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQE 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ V +G G+LG ES
Sbjct: 179 LSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDES------ 232
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P +K L + V+ A G S + G V+ G ++ + P
Sbjct: 233 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLP 289
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
++ +L S +V CG HT L S G +Y +G +G LG S + + P+ V GP+
Sbjct: 290 RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVLGPW 349
Query: 339 SESPVD 344
SP D
Sbjct: 350 V-SPSD 354
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+L+ WG S+GQLG+G + I IP+++ +Q A G ++ +T GKV + G
Sbjct: 2 DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+LGH + P LI EL+ V A G HS + E G+V +
Sbjct: 62 NNDQAQLGHNLPTK-----------RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSW 110
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD ++ D+ + + R SL+SK + ++ CG H+ LTS GELY+WGSN
Sbjct: 111 GDNDCGQLGQSTDQSIIELPKIIR--SLVSK--HVVQIACGNNHSLALTSCGELYSWGSN 166
Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
G LG+ L + P R+ P+ ++CG H+ IS+ + +G+G ++
Sbjct: 167 IYGQLGVKPPQELSHCNYPLRLTTLLG-IPLATIACGGNHSFLISKSSAV-FGFGRNN 222
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG N L + + + + Q++ G H+ A+ G +Y +G S+GQ LG ++
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGNRS 335
Query: 162 AKVIPIPTKV 171
+ +P +V
Sbjct: 336 TNSVTLPQEV 345
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 29/292 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +RP+ A + +K ACG HTL TE G VYATG N+ G
Sbjct: 54 MFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L S + ++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 114 QLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAALTEDGELFMWGDNSEGQIGLN 171
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P V G + G+ S VT GK+ ++G G+LG E I
Sbjct: 172 SISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLI- 226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQ 273
+ P+L+ + +++A G H+ + E VY FG ++ +FQ
Sbjct: 227 ------NHRKPQLVSGISEKVIQVACGGG-HTVVLTEKA-VYTFGQGRFGQLGLGSFIFQ 278
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A P+++ + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 279 ----APEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLG 326
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 155/313 (49%), Gaps = 40/313 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
L+CG HT +T +Y G N++GQLG+ S++ Y P+ + LK E V+++ G +
Sbjct: 36 LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVY--RPICVKALKSEKVKLAACGRN 93
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
H+ T G +Y G N+ GQLGLG + L FT KQ + G
Sbjct: 94 HTLVSTEGGNVYATGGNNEGQLGLGDTEER------NSFHLISFFTSRHKIKQLSAGANI 147
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S A+T G++ WG G++G S++ Y PR + G + + G+
Sbjct: 148 SAALTEDGELFMWGDNSEGQIGLNSISNV---------YVPRQV--TVGKPISWISCGYY 196
Query: 249 HSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLPYSEEVV---CGGYHTCV 302
HSA + G++Y FG+ K+ Q NH R+P L+S + SE+V+ CGG HT V
Sbjct: 197 HSAFVTMEGKLYTFGEPECGKLGLPSEQLINH-RKPQLVSGI--SEKVIQVACGGGHTVV 253
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAISE-GK 360
LT +YT+G G LG+GS + +PE + + + +SCG HTA I++ G
Sbjct: 254 LTEKA-VYTFGQGRFGQLGLGSF-IFQAPEPAILEHVKDQKIRHISCGENHTALITDVGH 311
Query: 361 ILTWGWGGSHGTF 373
+ T+G G HG
Sbjct: 312 MYTFG-DGRHGKL 323
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 141/282 (50%), Gaps = 24/282 (8%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
++G V+ FG+ ++ENI P + + +S G H++ IT + +LYM+
Sbjct: 6 DSGAVFT-----FGKTRLAENI-----PSKFWFKNDVPIYLSCGDEHTALITGNNKLYMF 55
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N+ GQLGLG K+A PI V+ L K AA G ++ T GG V + G G
Sbjct: 56 GSNNWGQLGLGSKSAVYRPIC--VKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G F S +T R K+K +AG SA + E+G ++++GD +
Sbjct: 114 QLGLGDTEERNSF-HLISFFTSRH-------KIKQLSAGANISAALTEDGELFMWGDNSE 165
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
++ ++ P ++ + CG YH+ +T G+LYT+G E G LG+ S +
Sbjct: 166 GQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQL 225
Query: 328 LH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
++ P+ V G SE V QV+CG HT ++E + T+G G
Sbjct: 226 INHRKPQLVSG-ISEK-VIQVACGGGHTVVLTEKAVYTFGQG 265
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F K + +ACGG H L
Sbjct: 315 FGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIF 360
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 160/334 (47%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + ++ +ACG +T+ +T+ G +Y+ G ND+
Sbjct: 31 WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V + + G +H+ AI G+L+ WG N+ GQLGL
Sbjct: 91 GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + P V+ L Q A G + + A+T G++ SWG+ G+LG G ++
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTK--- 203
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+ I G+ + A G HS I ++G V+ +G ++ +
Sbjct: 204 -----YEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L ++ CG + LT G ++T G+ G LG GS P +V
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-E 317
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + R R + + K ACG HTL + E G +++ G N GQL
Sbjct: 86 GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L VVQI+ G H+ A+T +GELY WG NS GQLGLG
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTK 203
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I P + GI A G S+A++ G V WG G+LG L
Sbjct: 204 YEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLG----------LN 252
Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T + P ++ L+ K+ AA G S + +G V+ G ++ ++ P
Sbjct: 253 DTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILP 312
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ +L S ++ CG HT L S G +Y WG G LG S + +P+ V GP
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG +G+LGLG + I IP +++ +Q A G +V +T G++ S G
Sbjct: 27 DMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCG 86
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGH + L +LI L+ K AA G H+ I+E G+++ +
Sbjct: 87 NNDYGQLGHEKGRKRL-----------QLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 263 GDRAVDKMLFQEGNHARR-PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
G ++ N P ++ L S ++ CG H LT+ GELY+WGSN G
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQ 195
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LG+G+ + F P+ ++CG H+ AIS+ G + WG
Sbjct: 196 LGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWG 242
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL + R P + + ACG ++FLT G V+ G +GQ
Sbjct: 241 WGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 300
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG N L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 301 LGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 163/322 (50%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK DI L G + + + F ++G+ ++G+LGLGS + +P A +
Sbjct: 29 SKFWLKNDIPLRIACGDEHTALITENGKLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
++ +ACG HTL T G VYA+G N GQLG+ + S + L + + +
Sbjct: 87 SEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKML 146
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G + S+A+TV G+L+MWG N+ GQ+GLGK++ + + E G + G+
Sbjct: 147 AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQ----VSSPQEVSVGQPISWVSCGYYH 202
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G + ++G SG+LG LG + P+L+K ++ V+ A G
Sbjct: 203 SALVTVDGALYTFGERDSGKLG-------LGTHQLPGHRVPQLVKSIKE-PVRQVACGGG 254
Query: 249 HSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E G VY FG ++ +F+ +R P L+ +VVCG HT
Sbjct: 255 HTVALAE-GNVYTFGLGQFGQLGHGTFIFE----SRVPRLVEHFKKGRACQVVCGENHTA 309
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
V+T G LYT+G +G LG+G
Sbjct: 310 VITEDGLLYTFGDGRHGKLGLG 331
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 30/308 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+ACG HT +TE G ++ G N++GQLG+ + + +P + LK E VQ ++ G +H
Sbjct: 41 IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVN-KPTCVKALKSEKVQLVACGRNH 99
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G++Y G NS GQLGLG + T + L + K A G S
Sbjct: 100 TLICTAKGKVYASGGNSEGQLGLGDCEER-----TSFKRLDFFDSQGPIKMLAAGSNTSA 154
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G G+ES + +P+ + G + + G+ HS
Sbjct: 155 ALTVSGKLFMWGDNTEGQIGLGKESQV---------SSPQEVSV--GQPISWVSCGYYHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYS-EEVVCGGYHTCVLTS 305
A + +G +Y FG+R K+ G H R P L+ + +V CGG HT L
Sbjct: 204 ALVTVDGALYTFGERDSGKLGL--GTHQLPGHRVPQLVKSIKEPVRQVACGGGHTVALAE 261
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
G +YT+G + G LG G+ R+ F + QV CG HTA I+E +L
Sbjct: 262 GN-VYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTF 320
Query: 366 WGGSHGTF 373
G HG
Sbjct: 321 GDGRHGKL 328
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 30/295 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ E+G V+ FG+ ++NI LK ++ ++I+ G H++ IT +G+L
Sbjct: 9 IPESGAVFT-----FGKSKFADNIPSKF------WLKNDIPLRIACGDEHTALITENGKL 57
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+M+G N+ GQLGLG K + PT V+ L + A G ++ T GKV + G
Sbjct: 58 FMFGSNNWGQLGLGSKV--TVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGN 115
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F R + +G +K+ AAG SA + +G+++++GD
Sbjct: 116 SEGQLGLGDCEERTSFKRLD-------FFDSQG-PIKMLAAGSNTSAALTVSGKLFMWGD 167
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + P +S V CG YH+ ++T G LYT+G ++G LG+G+
Sbjct: 168 NTEGQIGLGKESQVSSPQEVSVGQPISWVSCGYYHSALVTVDGALYTFGERDSGKLGLGT 227
Query: 325 IDVL--HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTF 373
+ P+ V+ + PV QV+CG HT A++EG + T+G G HGTF
Sbjct: 228 HQLPGHRVPQLVKS--IKEPVRQVACGGGHTVALAEGNVYTFGLGQFGQLGHGTF 280
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G D G+LGLG+ L P + + K ++ +ACGG HT+ L E G VY GL F
Sbjct: 215 FGERDSGKLGLGTHQLPGHRVPQLVKSI-KEPVRQVACGGGHTVALAE-GNVYTFGLGQF 272
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG I S P + KK Q+ G +H++ IT DG LY +G +G+LGLG+
Sbjct: 273 GQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGLGE 332
Query: 160 K 160
+
Sbjct: 333 E 333
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + ++++P +C F K++++ CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVL 365
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 151/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G F
Sbjct: 337 WGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 396
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P ++ G + V IS G H+ +T G+L+ +G S G LG G
Sbjct: 397 GLLGHGNDISHWV-PKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG 455
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 456 DRES--LSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 513
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L A G + + +G VY G
Sbjct: 514 GRLGHGDKESRL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 564
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G+
Sbjct: 565 YGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGN 624
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D ++P V+ + V V CG TAAI
Sbjct: 625 TDDKNTPTLVEA-LKDKQVRNVVCGTNFTAAI 655
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 156/318 (49%), Gaps = 36/318 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ ++CGG H +++ G +Y+ G G+LG + + P I L ++ ++ G
Sbjct: 315 VQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-HPKLIDALTHMNIELVACG 373
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
+H+ A+T+ G+LY WG + G LG G + +P K+ L GI + G
Sbjct: 374 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHW--VPKKLHGPLEGIHVSSISCGPFH 431
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+V VT G++ ++G G G LGHG S+ P+ ++ L+G++ AA G
Sbjct: 432 TVIVTSAGQLFTFGDGSFGVLGHGDRESL---------SVPKEVESLKGLRTVRAACGVW 482
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ R P+ ++ L P +
Sbjct: 483 HTAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKESRLVPTCVAALVEPNFCQ 540
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG H
Sbjct: 541 VACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGM-LPARVEGKLHKNFVEEISCGAYH 599
Query: 353 TAAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 600 VAVLTSRTEVYTWGKGAN 617
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + + V+ G++ SWG GRLGHG + +
Sbjct: 303 VPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-------- 354
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSL 283
P+LI L + +++ A G H+ + +G +Y +GD L GN H L
Sbjct: 355 -HPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKL 413
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
L + + CG +HT ++TS G+L+T+G G LG G + L P+ V+
Sbjct: 414 HGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLR 473
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GKI TWG G
Sbjct: 474 TV-RAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDG 511
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 163/344 (47%), Gaps = 32/344 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++E+GR+ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
P + L ++ GG+H+ LT GE+Y WG E+G LG+G D
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMV 292
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V +E + QVSCG H+ A++ +G+I ++G G HG
Sbjct: 293 PQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFG-RGDHGRL 334
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 121/289 (41%), Gaps = 22/289 (7%)
Query: 92 VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ A G + GQLGI N + +LEP + + +G +S AI DG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVR-------SVVSGSRNSLAICDDGTM 59
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG + K IP++V+ L+ + QAA+G +AV G+ +WG
Sbjct: 60 FTWGWNQRGTLGH-QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+ G +G P+ + + V+ AAG HS + G V+ +G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ Q P + L + G +H L G L WG+NE G LG G
Sbjct: 177 PWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
P VQG + VD + GW TA +G++ WG G HG
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRL 280
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G + A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T GE+Y WG+ +G+LGLG +P KV L+
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDII 305
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +N S + P +++ L +E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFT 179
P +P K+ G F
Sbjct: 340 VTTGQPLELPIKIPPPEGSFN 360
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 159/320 (49%), Gaps = 24/320 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG + P F+K +K ++ H+L LT TG VY+ G D+
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + + L L +VV+ +S GY HS+A+T DGELY WG G+LG
Sbjct: 512 GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDY 571
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
++K PTKV+ + + A G ++AV+ GK + S+G G +G+LGHG
Sbjct: 572 TSSK--NFPTKVQSIESV--GLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGD----- 622
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ + P++I+ L G+ ++ A G S + +G++Y +G A+ E A
Sbjct: 623 ----TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYT-A 677
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 335
RP L+ L ++ CG H LT E+Y WG+N G G G + + P+RV
Sbjct: 678 LRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVI 737
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G V QVS G H+ A
Sbjct: 738 G-LDGVSVHQVSAGTSHSVA 756
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 19/258 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ S + + Q+ G + I DG + GK S G+LGLG +P K
Sbjct: 422 KYSAVFTDCQQVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVP---KKPLFDK 478
Query: 177 IFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ K+ ++ G + S+A+T G+V SWG G G+LGHG S ++ P+L+K
Sbjct: 479 KYVKKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHS---------TQKIPKLVK 529
Query: 234 -ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
L G VK +AG+ HSA + E+G +Y +GD ++ + P+ + +
Sbjct: 530 GPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL 589
Query: 293 VVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
V CGG HT ++ G+ ++++G ENG LG G + P+ ++ + + +V+CG +
Sbjct: 590 VACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEA-LNGLYIRKVACGSQ 648
Query: 352 HTAAI-SEGKILTWGWGG 368
+ A+ S G++ WG G
Sbjct: 649 SSLAVTSSGQLYAWGCGA 666
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 30/234 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P +V +K ++ G H+ +TE G +Y G +FG
Sbjct: 506 WGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFG 565
Query: 102 QLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLG 156
+LG S+N ++ + GL ++ G H+ A++ DG+ ++ +G NG+LG
Sbjct: 566 RLGHDYTSSKNFPTKVQSIESVGL------VACGGSHTLAVSQDGKTIWSFGGGENGKLG 619
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L+G++ ++ A G + S+AVT G++ +WG G +
Sbjct: 620 HGDTNRQL--KPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCG-----------A 666
Query: 217 ILGFLRSTSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
ILG ++EYT PRL+++L+ ++ A G H + VY +G+ A+
Sbjct: 667 ILGC--GSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAM 718
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 27/255 (10%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVL 199
GE+Y+WG N QL G + P S +FT +Q G + + G V
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPK------YSAVFTDCQQVEAGQFCTFLIYSDGTVG 450
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G G GRLG G ++ + + + +K++ K + G HS + G V
Sbjct: 451 ACGKGSYGRLGLGDSNNC--SVPKKPLFDKKYVKKISSSK---GSDG--HSLALTTTGEV 503
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNE 316
Y +GD K+ + + P L+ + V C GY H+ +T GELYTWG E
Sbjct: 504 YSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGE 563
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
G LG + P +VQ S V V+CG HT A+S+ W +GG E+
Sbjct: 564 FGRLGHDYTSSKNFPTKVQ---SIESVGLVACGGSHTLAVSQDGKTIWSFGG-----GEN 615
Query: 377 GHSSGGQLDRGQLTP 391
G G +R QL P
Sbjct: 616 GKLGHGDTNR-QLKP 629
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+ G+LG G + +P V A ++ +ACG +L +T +G +YA G
Sbjct: 610 FGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILG 669
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G +E +L P + L+ K +V I+ G H A+T + E+Y WG N+ GQ G G A
Sbjct: 670 CGSAEYT--ALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG-HA 726
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
I P +V L G+ Q + G SVA T
Sbjct: 727 QSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTA 759
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 156/329 (47%), Gaps = 23/329 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + +++ ACGG+HTL LT+ G +Y G ND
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N + P IS L+ +V Q+S G HS A+T G+L+ WG N+ GQLG
Sbjct: 66 GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P ++ ++ Q + G +A+T G++ +WGA G+LG G +
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T L+K L G+ + A G HS + ++G ++ +G ++ + +
Sbjct: 185 --------TATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRC 236
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RV 334
P+ + L + CG + LT G ++T G G LG G+ H E R+
Sbjct: 237 YPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT----HGNEILPRM 292
Query: 335 QGPFSESPVDQVSCGWKHTAAI--SEGKI 361
S + Q++CG KHT A S GK+
Sbjct: 293 VFELMGSKITQIACGRKHTLAFVPSRGKV 321
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 152/309 (49%), Gaps = 21/309 (6%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG +L ++ RP SA E + + ++CG +H+L LT G +++ G N G
Sbjct: 61 GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQIS G+ H A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV P T V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P +K L + V+ + G S + + G V+ G ++ G H
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287
Query: 281 --PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P ++ +L S+ ++ CG HT S G++Y +G G LG+GS ++P+ V+
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVR 347
Query: 336 GPFSESPVD 344
GP+ + +D
Sbjct: 348 GPWVSNWID 356
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG +G+LGLG + + P +++ +QAA G ++ +T GK+ + G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+++ +G
Sbjct: 63 NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A ++ + P +I + ++ CG H LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G+G+ + + P+ ++CG H+ A+S+ G I WG
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG 220
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 22/303 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G ++ GN + +P I L + CG HT VLT G++
Sbjct: 198 TGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
+T+G N +G L P+ ++G V Q+ C HT A + G++++ G G
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314
Query: 368 GSH 370
SH
Sbjct: 315 PSH 317
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 22/251 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
+ G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGWKHTAA 355
H+ L+ G + WGSN +G L + V ++ P + G V +SCG++HTA
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAV 249
Query: 356 IS-EGKILTWG 365
++ EG++ T+G
Sbjct: 250 LTEEGQVFTFG 260
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
+ + V CG H+ + G+++ WG+ G LGIG ++ P +++ + +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130
Query: 345 QVSCGWKHTAAISE-GKILTWG 365
QVSCG H+ A+SE G + +WG
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWG 152
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG R S P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ---------RRDQSTERPEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSE-- 291
L + V + + G HS + G+V+ +G + ++ E + P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGW 350
+V CG YH+ L+ G +++WG N G LG+G + P++V+ P+ QV+ G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAAGG 189
Query: 351 KHTAAISEGKILTWGWG 367
H+ A+S ++GWG
Sbjct: 190 THSFALSLTGT-SFGWG 205
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 153/309 (49%), Gaps = 21/309 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
++ACG H++F+T +G ++ G ND+GQLG + P + LK K + ++ G
Sbjct: 46 SVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKAL-VNPRCVKALKDKRAILVACGRS 104
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ T D ++Y +G NS QLG+ K +A P V L+G+ K G + S+A++
Sbjct: 105 HTLVATDDKKVYAFGINSEHQLGV-KSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V WG+ G+LG G R P +K EG + I+A + HSA +
Sbjct: 164 AKGIVYLWGSSEHGQLGLG---------RKKQRKLPVQLKT-EGKAIAISAGAY-HSAYV 212
Query: 254 DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
+ +G +Y FG+ K+ R+PS + + V CGG HT LT G Y+
Sbjct: 213 NTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYS 272
Query: 312 WGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
+G G LG+G V H+ P +Q P + + +VS G HTA +SEG+ + G
Sbjct: 273 FGDGSQGQLGLGQ-RVTHAGRPHLIQMP-TGVKMARVSAGQSHTAFLSEGRQMYTCGEGR 330
Query: 370 HGTFS-EDG 377
HG + EDG
Sbjct: 331 HGKLALEDG 339
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 151/324 (46%), Gaps = 33/324 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ DYG+LG G ++ P A + +ACG +HTL T+ VYA G+N Q
Sbjct: 66 FGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQ 125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + Y +P ++ L +V ++ G HS A++ G +Y+WG + +GQLGLG+K
Sbjct: 126 LGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKK 185
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ K E + + G S V G + ++G G+LG L
Sbjct: 186 QRKLPVQLKTEGKAIAISA----GAYHSAYVNTDGVLYTFGETEHGKLGTN--------L 233
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
P + +++G+ +A G H+ + +GR Y FGD + ++ L Q HA R
Sbjct: 234 APKKCRKPSKVPDIQGLVTSVACGGS-HTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGR 292
Query: 281 PSLISKLPY---SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P LI ++P V G HT L+ G ++YT G +G L L E
Sbjct: 293 PHLI-QMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKLA------LEDGEMGSNK 345
Query: 338 FSESPVD--------QVSCGWKHT 353
FS VD QVSCG HT
Sbjct: 346 FSPMLVDILSLFQVQQVSCGGCHT 369
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V+ ++ G HS IT G + +G N GQLG G A V P C+ + K+A L
Sbjct: 44 VISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNP-----RCVKALKDKRAIL 98
Query: 185 ---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVK 239
G ++ T KV ++G +LG ++S++ Y P+L+ L GV+
Sbjct: 99 VACGRSHTLVATDDKKVYAFGINSEHQLG----------VKSSAAYHADPQLVATLNGVQ 148
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
VK AG HS + G VY++G ++ + P + + + G YH
Sbjct: 149 VKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYH 208
Query: 300 TCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
+ + + G LYT+G E+G LG + P +V P + V V+CG HT A++
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKV--PDIQGLVTSVACGGSHTVALTC 266
Query: 358 EGKILTWGWG 367
+G+ ++G G
Sbjct: 267 DGRAYSFGDG 276
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG+ ++G+LGLG + R PV K A++ G H+ ++ G +Y G + G
Sbjct: 170 LWGSSEHGQLGLGRKKQRKLPVQLKTEGK--AIAISAGAYHSAYVNTDGVLYTFGETEHG 227
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + +P ++ ++ V ++ G H+ A+T DG Y +G S GQLGLG++
Sbjct: 228 KLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRV 287
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ +G+ + + G + ++ G ++ + G G G+L E +G
Sbjct: 288 THA-GRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL--ALEDGEMG-- 342
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+++++P L+ L +V+ + G H+ + G G+R D
Sbjct: 343 --SNKFSPMLVDILSLFQVQQVSCGGCHTLVLVVPGLTDPQGNRMGD 387
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 160/362 (44%), Gaps = 62/362 (17%)
Query: 43 WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG RLG G+ + +P + FE +++ +ACGG HTL L E GC+++ G N +G
Sbjct: 15 WGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYG 74
Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + L+ R IS L +++ ++ G +HS+A+ V+G ++ WG NG+LG +
Sbjct: 75 QLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDE 134
Query: 161 AAKVIP-----IPT--KVEC---------LSGIFT------------------------- 179
+ IP +P K+ C G++T
Sbjct: 135 QTRTIPCRITHLPRAHKIFCGYHITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIF 194
Query: 180 -------KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
Q A G + T G V +WG+ G+LG G+ + I +P L+
Sbjct: 195 DDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYS--------SPVLL 246
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYS 290
L G+ V AAG HSA + G ++ +G A + + N P L+ L +
Sbjct: 247 TSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFI 306
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG T L+ ++Y +G+N G LG GS +P ++ FS ++CG
Sbjct: 307 LKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKL--FFSIPGTIDITCGH 364
Query: 351 KH 352
H
Sbjct: 365 FH 366
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 15/225 (6%)
Query: 144 LYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG+ N +LG G + P KV +Q A G ++ + G + S+G
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKV--FENCAIQQVACGGGHTLVLLEDGCLHSFG 69
Query: 203 AGGSGRLGHGQE-SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G+LG+G + S L R S + +LI A G HSA +D NG V+
Sbjct: 70 YNQYGQLGNGTKVDSPLDASRDISSLSNKLIA---------VACGRYHSAALDVNGTVFT 120
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+G ++ + P I+ LP + ++ CG + T +T G LYTWG E+G LG
Sbjct: 121 WGGGKNGRLGHNDEQTRTIPCRITHLPRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLG 179
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
GS++ + P++V + + Q++CG +H +E G + TWG
Sbjct: 180 QGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWG 224
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 165/342 (48%), Gaps = 38/342 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLGLG + +P + A ++ +ACG HT +T G +Y G+++
Sbjct: 300 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 359
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG+ + +V ++ G H++ I+ G+L+ +G + G LG G
Sbjct: 360 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 418
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K K I P +V+ L+G+ T A G + AV GK+ +WG G
Sbjct: 419 DK--KSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 476
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V+ G
Sbjct: 477 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS--- 524
Query: 268 DKMLFQEGN-HA--RRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ Q GN HA ++P L+ KL +EEV CG YH VLTS E+YTWG NG LG
Sbjct: 525 -SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLG 583
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
G ++ SP V+ + V ++CG ++AAI K L+
Sbjct: 584 HGDVEDRKSPTLVES-LKDKHVKIIACGSNYSAAICLHKSLS 624
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 40/256 (15%)
Query: 142 GELYMWGK--NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++++WG+ + N +A+ V + +P +E + + A G S VT
Sbjct: 234 GDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAIVTR 293
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLG LG + ++ PRL++ L V + A G H+ +
Sbjct: 294 QGEVFTWGEETGGRLG-------LGMGKDVTQ--PRLVEALAATTVDLVACGEFHTCAVT 344
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSG 306
+G +Y +GD + L G P IS ++ Y V CG +HT +++S
Sbjct: 345 MDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAY---VACGPWHTALISST 401
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
G+L+T+G G LG G + P V + V+CG HTAA+ E
Sbjct: 402 GQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTI-AVACGVWHTAAVVEVIMTQSST 460
Query: 359 ----GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 461 SIPSGKLFTWGDGDKN 476
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + + I+ G HS+ +T GE++ WG+ + G+LGLG K + P VE
Sbjct: 268 KPLE-SNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEA 324
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G +G LG+G + S + P+
Sbjct: 325 LAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTD---------VSHWMPKR 375
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG++V A G H+A I G+++ FGD + + P + L
Sbjct: 376 ISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGL 435
Query: 289 YSEEVVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + G+L+TWG + LG G + P V
Sbjct: 436 RTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA- 494
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +++CG T + + G++ T G
Sbjct: 495 LIDYNFHKIACGHSITIGLTTSGQVFTVG 523
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 254 DENGRVYIFGDRAVDKML----FQEGNHARRPSLISKLPYSEEVV-------CGGYHTCV 302
D G ++++G+ D + + N + R ++ P +V CG H+ +
Sbjct: 231 DALGDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAI 290
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
+T GE++TWG G LG+G + P V+ + + VD V+CG HT A++ +G++
Sbjct: 291 VTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEA-LAATTVDLVACGEFHTCAVTMDGEL 349
Query: 362 LTWGWG 367
TWG G
Sbjct: 350 YTWGDG 355
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 34/338 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E RP + + ++ +ACG HT +T TG +Y+ G ++
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P R+SG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
K + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + + L P + L A G + + +G+V G+
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
AV L + R P L+ E+V+ CG YH VLT E++TWG NG LG
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGH 387
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
G I+ P V+ + V ++CG TAAI + K
Sbjct: 388 GDIEDRKVPTLVE-VLKDRAVRYIACGANFTAAICQYK 424
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + + ++P P + + ++ G + + V
Sbjct: 35 GDVYVWGEVVCDTSVRTGSDTVISSTGRTDILLPKPLESNLVLDVY--HVDCGVKHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+V +WG GRLGHG + PRL++ L V A G H+
Sbjct: 93 MKNGEVFTWGEDSGGRLGHGTREDCV---------RPRLVESLTVSNVDFVACGEFHTCA 143
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLT 304
+ G +Y +GD + L GN P +S ++ Y V CG +HT ++T
Sbjct: 144 VTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAY---VSCGTWHTALIT 200
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------ 358
S G+L+T+G G LG G + + P V+ S V+CG HTAAI E
Sbjct: 201 SMGQLFTFGDGSFGVLGHGDLKSVSYPREVES-LSGLKTIAVACGVWHTAAIVEVIVTRS 259
Query: 359 --------GKILTWGWGGSH 370
GK+ TWG G H
Sbjct: 260 SSSVKLSAGKLFTWGDGDKH 279
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 32/271 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ + +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCV--RPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ SWG G G LGHG + + P+
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGND---------VGHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG++V + G H+A I G+++ FGD + + + P + L
Sbjct: 177 VSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVLT-------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCV- 295
Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T A+ + G++L+ G
Sbjct: 296 ATLIDHDFYRVACGHSLTVALTTSGQVLSMG 326
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 169/358 (47%), Gaps = 45/358 (12%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 158 ------GKKAAKVIPIPTKV---EC------------LSGIFTKQAALGFEQSVAVTGGG 196
+ + +P+ + EC L + L VAV+
Sbjct: 121 SEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVS-AS 179
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG G+LG G + + +P+LIK L G+ AAG HS + +
Sbjct: 180 EVFCWGQNKYGQLGLG--------IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS 231
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
G ++ +G ++ + N P L+ L S+++V CG HT LT G ++T+G
Sbjct: 232 GAIFGWGRNKFGQLGLNDENDRYVPYLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFG 290
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
+ G LG S +P +V S V Q++CG +HT+A S G+I ++G GG+
Sbjct: 291 AGGYGQLGHNSTSHEINPRKV-FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 347
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 142/320 (44%), Gaps = 39/320 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GI----------SENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVD----------- 141
G+ ++I ++ +RI KK + S S + D
Sbjct: 117 GLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV 176
Query: 142 --GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
E++ WG+N GQLGLG K P ++ L GI Q A G S +T G +
Sbjct: 177 SASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
WG G+LG E+ Y P L+K L K+ G H+A + + G V
Sbjct: 236 GWGRNKFGQLGLNDEN---------DRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGV 286
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNE 316
+ FG ++ +H P + +L S ++ CG HT + S G +Y++G
Sbjct: 287 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 346
Query: 317 NGCLGIGSIDVLHSPERVQG 336
NG LG GS SP V+G
Sbjct: 347 NGQLGTGSTSNRKSPFTVKG 366
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 184 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 243
Query: 102 QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+++ + Y L+ LR +++V I G H++A+T +G ++ +G GQLG
Sbjct: 244 QLGLNDENDRYVPYLLKSLR----SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 299
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 300 NSTSHEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 357
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 140/319 (43%), Gaps = 19/319 (5%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LG G ++ S PV ++ AL+ GG H L +T G A G N +G
Sbjct: 117 WGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWG 176
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG S P+ ++ + ++ G HS A+T G WG NS+GQLG G
Sbjct: 177 QLGDGSTT-RSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTA 235
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
IP+ V G A G S+A+T GG VL+WGA GSG+LG G
Sbjct: 236 TDSSIPVAADVPA--GTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGT------- 286
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+TS TP + G V AAG HS + G V +GD ++ H+
Sbjct: 287 --TTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSST 344
Query: 281 PSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + +P V G H+ +TS WG N G LG GS P V P
Sbjct: 345 PVAV-NVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLP 403
Query: 338 FSESPVDQVSCGWKHTAAI 356
+ V ++ G H+ AI
Sbjct: 404 AGTT-VTAIAGGSFHSLAI 421
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 136/328 (41%), Gaps = 18/328 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G+ PV + ++ A+A G H+L +T G A G N FGQ
Sbjct: 65 WGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQ 124
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG I S P+ + V +S G H+ A+T G WG N GQLG G
Sbjct: 125 LGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTT 184
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V +G A G S+AVT G L+WG SG+LG G
Sbjct: 185 RSRTPV--AVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGT-------- 234
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T P G + AAG LHS + G V +G ++ + P
Sbjct: 235 -ATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTP 293
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +P V GG H+ +TS G++ WG N G LG GS +P V P
Sbjct: 294 VAV-DVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPA 352
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ + V+ G H+ A+ S L WG
Sbjct: 353 GTT-ITAVATGSGHSLAVTSTDTALAWG 379
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G ++
Sbjct: 336 WGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 395
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 396 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG 454
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P ++E L G+ T QAA G + AV GK+ +WG G
Sbjct: 455 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 512
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L ++A G + + +G VY G
Sbjct: 513 GRLGHGDKESKL---------VPTCVVTLVEPNCQVAC-GHSMTVALSRSGHVYTMGSCV 562
Query: 267 VDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL S EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 563 YGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGD 622
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ ++P V+ + V ++CG TAAI
Sbjct: 623 TNDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 653
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 39/319 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G V++ G G+L G+ ++ + P I L ++ ++
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPH---PKLIESLSNTNIELVA 370
Query: 130 TGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHW--VPKRVNGPLEGIHVSSISCGP 428
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR I+ L+G++ AA G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGALGHGDRKSV---------SLPREIESLKGLRTVQAACG 479
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE- 291
H+A + E +G+++ +GD DK G+ + P+ + L
Sbjct: 480 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKESKLVPTCVVTLVEPNC 537
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+V CG T L+ G +YT GS G LG D P RV+G S+S V++++CG
Sbjct: 538 QVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADG-KLPIRVEGKLSKSFVEEIACGAY 596
Query: 352 HTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 597 HVAVLTSRTEVFTWGKGAN 615
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G+V SWG GRLGHG +S +
Sbjct: 302 LPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP-------- 353
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI+ L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 354 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 412
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT V+TS G+L+T+G G LG G + P ++
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLR 472
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V Q +CG HTAA+ E GK+ TWG G
Sbjct: 473 TV-QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 510
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G V+ +G+ + ++ + P LI L
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+ E V CG YHTC +T G+LYTWG + G LG G+ P+RV GP V
Sbjct: 363 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 422
Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 423 SISCGPWHTAVVTSSGQLFTFG----DGTFGALGH 453
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 163/329 (49%), Gaps = 22/329 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P+ + ++ + G HT+ LT++G V++ G ND
Sbjct: 4 WGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGNNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + +P ++ GL + +IS G +H+ A G+L+ WG +S+GQLG
Sbjct: 64 DQLGHKKQ---RTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNG 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+P ++ L+ Q + G S+A+T G++ SWG G+LG G
Sbjct: 121 TTQ---PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG------- 170
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+RS E P LIK L G+ + A G HS + ++G +Y +G ++ + +
Sbjct: 171 -MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKL 229
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L + + CG + L++ G ++T G+ G LG GS P ++
Sbjct: 230 HPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIM-E 288
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTW 364
S V QVSCG +HT A+ S G++ ++
Sbjct: 289 LMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 153/333 (45%), Gaps = 19/333 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D +LG + R +P + + + ++CGG HTL E G ++ G + GQL
Sbjct: 59 GNNDLDQLG--HKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQL 116
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + L + S +VQIS G +HS A+T +GELY WG N +GQLGLG + ++
Sbjct: 117 GFN-GTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR-SE 174
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PT ++ L GI A G S A++ G + WG G+LG E + L
Sbjct: 175 YEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH---- 230
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P +K L ++VK A G SA + +G V+ G ++ ++ P
Sbjct: 231 -----PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRK 285
Query: 284 ISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
I +L S +V CG HT L S G +Y++G G LG +P+ V GP+
Sbjct: 286 IMELMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGGGGQLGTRVKTNCSTPQVVLGPWVS 345
Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
V K T SE ++T + G + +F
Sbjct: 346 PSGVPVITDKKKT---SENVLVTHIFSGGNQSF 375
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 23/232 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG +G+LGLG I P + Q +G +V +T G+V S G
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LGH ++ + P ++ L+ ++ + G H+ +E G+++ +G
Sbjct: 61 NDLDQLGHKKQRT-----------KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWG 109
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ ++ F G P +I L + ++ CG H+ LT+ GELY+WG N +G LG
Sbjct: 110 SDSHGQLGFN-GTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLG 168
Query: 322 IGSIDVLHSPERVQGPFSES----PVDQVSCGWKHTAAISEGKILTWGWGGS 369
+G + S Q +S P+ ++CG H+ A+S+ + +GWG +
Sbjct: 169 LG----MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAI-YGWGKN 215
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 9 MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWR 61
M Y KQ + S LGI +I+ FA WG YG+LGL E++
Sbjct: 171 MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P +K +ACG + FL+ G V+ G +GQLG + + P +I L
Sbjct: 231 PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLG-HGSTSNEILPRKIMEL 289
Query: 122 K-KEVVQISTGYHHSSAIT 139
V Q+S G H+ A+
Sbjct: 290 MGSTVTQVSCGKRHTLALV 308
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+V G HT +LT GE+++ G+N+ LG PE+V+G + ++SCG
Sbjct: 38 QVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRT--KPEKVEG-LDFYRITKISCGGN 94
Query: 352 HTAAISE-GKILTWGWGGSHGTFSEDG 377
HT A +E G++ WG SHG +G
Sbjct: 95 HTLAFNEWGQLFGWG-SDSHGQLGFNG 120
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 152/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 301 WGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNA 360
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 361 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 419
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G QS + GK+ +WG G
Sbjct: 420 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKS 477
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + + +G+VY G V
Sbjct: 478 RLGHGDKESRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 527
Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + P L+ KL EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 528 YGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGD 587
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ +P V E V ++CG TAAI
Sbjct: 588 IEDRKAPSLVDT-LKERHVKNIACGSNFTAAI 618
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 146/315 (46%), Gaps = 37/315 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYH 133
+ACG H ++ G V+ G G+LG +G + P I L V ++ G
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLG--HGMGKDVTGPQLIESLAATSVDFVACGEF 339
Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
H+ A+T+ GE+Y WG ++ G LG G + IP ++ L G+ + G +
Sbjct: 340 HTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHW--IPKRISGPLEGLQIASVSCGPWHTA 397
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G++ ++G G G LGHG + ++ + PR ++ L G++ A G H+
Sbjct: 398 LITSTGQLFTFGDGTFGVLGHGDKETV---------FYPREVESLSGLRTIAVACGVWHA 448
Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EEVVC 295
A I E +G+++ +GD DK G+ R P+ +S L V C
Sbjct: 449 AAIVEVIVTQSTSSISSGKLFTWGDG--DKSRLGHGDKESRLKPTCVSALIDHTFHRVAC 506
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G T LT+ G++YT GS G LG + D P V+ + V++++CG H A
Sbjct: 507 GHSLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLIKDCVEEIACGAYHVAV 565
Query: 356 I-SEGKILTWGWGGS 369
+ S ++ TWG G +
Sbjct: 566 LTSRNEVFTWGKGAN 580
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 37/252 (14%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G K A V + IP +E + A G + V+
Sbjct: 234 GDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVS 293
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG + G P+LI+ L V A G H+ +
Sbjct: 294 RQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSVDFVACGEFHTCAV 344
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G P IS P V CG +HT ++TS G
Sbjct: 345 TMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTG 403
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+L+T+G G LG G + + P V+ S V+CG H AAI E
Sbjct: 404 QLFTFGDGTFGVLGHGDKETVFYPREVES-LSGLRTIAVACGVWHAAAIVEVIVTQSTSS 462
Query: 359 ---GKILTWGWG 367
GK+ TWG G
Sbjct: 463 ISSGKLFTWGDG 474
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 155/340 (45%), Gaps = 48/340 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 356 WGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNY 415
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 416 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 474
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +A+ G + AV GK+ +WG G
Sbjct: 475 DR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 532
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + +E ++A L + + +G VY G
Sbjct: 533 GRLGHGDKEAKL---------VPTCVALVEHNFCQVACGHSL-TVALTTSGHVYAMGS-- 580
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLT E+YTWG
Sbjct: 581 --PVYGQLGN----PQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGA 634
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D ++P V + V ++CG TAAI
Sbjct: 635 NGRLGHGDTDDRNNPTLVDA-LKDKHVKSIACGTNFTAAI 673
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 157/319 (49%), Gaps = 39/319 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G +++ G G+L G+ ++ L P I L ++ ++
Sbjct: 334 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDALSNTNIELVA 390
Query: 130 TGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 391 CGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHW--VPKRVNGPLEGIHVSYISCGP 448
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ A+ G
Sbjct: 449 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTMRASCG 499
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE- 291
H+A + E +G+++ +GD DK G+ + P+ ++ + ++
Sbjct: 500 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVALVEHNFC 557
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+V CG T LT+ G +Y GS G LG D P RV+G +S V++++CG
Sbjct: 558 QVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADG-KLPTRVEGKLLKSFVEEIACGAY 616
Query: 352 HTAAIS-EGKILTWGWGGS 369
H A ++ ++ TWG G +
Sbjct: 617 HVAVLTLRNEVYTWGKGAN 635
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 30/230 (13%)
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GLG K + P +E + + A G + VT G++ SWG GRLGHG +S
Sbjct: 313 GLGVKIDSLFP--KALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDS 370
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+L P+LI L +++ A G H+ + +G +Y +G+ A + L G
Sbjct: 371 DVL---------HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHG 421
Query: 276 NHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
N P ++ + + + CG +HT V+TS G+L+T+G G LG G +
Sbjct: 422 NQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSL 481
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-------------GKILTWGWG 367
P V+ + SCG HTAA+ E GK+ TWG G
Sbjct: 482 PREVES-LKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 530
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G ++ +G+ + ++ + P LI L
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+ E V CG YHTC +T G+LYTWG+ G LG G+ P+RV GP V
Sbjct: 383 NTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 442
Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 443 YISCGPWHTAVVTSAGQLFTFG----DGTFGALGH 473
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 153/324 (47%), Gaps = 20/324 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G+ G+LGLG E+ P + + + ++K ++ GG H L L+ G V++ G + G
Sbjct: 1500 GYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDG 1559
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N S +P RI K + I G HS+AI ++GELY WGK G+LG G
Sbjct: 1560 KLG-HGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDS 1618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +VE L F A G Q++ +T V SWG G G+LG G
Sbjct: 1619 DDQLKP--KQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGG----- 1671
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P +I++L G + G S + + G +Y +G ++ H
Sbjct: 1672 ----SDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHV 1727
Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
RRP +++ L + CG H V T GE+Y WG N+ G LG G+I +P +
Sbjct: 1728 RRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTP-TLNT 1786
Query: 337 PFSESPVDQVSCGWKHTAAISEGK 360
+D++SCG HT A S K
Sbjct: 1787 FLLNKKIDRISCGSAHTIAWSTSK 1810
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 161/354 (45%), Gaps = 21/354 (5%)
Query: 26 ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
+C W +ST ++ +WG D +LG P +C K +A G T F
Sbjct: 546 LCTLWENSTNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFF 605
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDG 142
+T G +Y+ G + FG+LGI + G P ++GL + + V + +G +H A+T DG
Sbjct: 606 ITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ WG NGQLG G + P +E G + G S A+ + +WG
Sbjct: 666 LAFSWGDGENGQLGHGNLMS--CSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWG 723
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVY 260
G GRLGHG E +IL P+ + G V + G + CI ++ +V+
Sbjct: 724 LGDFGRLGHGDEETIL---------QPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVW 774
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+GD K+ P + +L + +++CG T LT G ++TWG +
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFY 834
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
LG G+ + P+ V+G + +D ++ G H A++ +G++ +WG HG
Sbjct: 835 RLGHGTDIHVRQPKLVEGLRGKHVID-IAVGALHCLAVTQDGEVFSWG-DNDHG 886
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 21/273 (7%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG+G+ G+LG G+L S +P + AF + ++CG AH+ + E +Y GL
Sbjct: 666 LAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLG 725
Query: 99 DFGQL--GISENIGYSLEPLRISG-LKKEVVQISTGYH--HSSAITVDGELYMWGKNSNG 153
DFG+L G E I L+P ++ L VVQ+S G + IT D +++ WG G
Sbjct: 726 DFGRLGHGDEETI---LQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFG 782
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G +IP+ +VE L G+ + G + +VA+T G V +WG G RLGHG
Sbjct: 783 KLGRGGSERCLIPV--EVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGT 840
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + P+L++ L G V A G LH + ++G V+ +GD ++
Sbjct: 841 DIHV---------RQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTG 891
Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLT 304
E + + P+LI+ L + V CG H+ T
Sbjct: 892 ETDVKKVPNLITGLHNHRIKYVACGSSHSIAWT 924
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 19/322 (5%)
Query: 44 GNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G +G+LG+G + + P + + + + ++ GG H + LT G ++ G +
Sbjct: 616 GESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGEN 675
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + S L + + K V IS G HS+AI + LY WG G+LG G +
Sbjct: 676 GQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDE 735
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ I P V G Q + G Q+V +T KV SWG G G+LG G L
Sbjct: 736 --ETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCL 793
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P +++L G+++ G + + + G V+ +G ++ H
Sbjct: 794 ---------IPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHV 844
Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P L+ L + ++ G H +T GE+++WG N++G LG G DV P + G
Sbjct: 845 RQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITG 904
Query: 337 PFSESPVDQVSCGWKHTAAISE 358
+ V+CG H+ A +E
Sbjct: 905 -LHNHRIKYVACGSSHSIAWTE 925
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P++ + + CG ++ LT+ G +Y G D+ +
Sbjct: 1659 WGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYR 1718
Query: 103 L--GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ P+ ++ L K V IS G H T +GE+Y WG N GQLG G
Sbjct: 1719 LGHGTEEHVR---RPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGT 1775
Query: 160 KAAKVIP 166
A+ P
Sbjct: 1776 IIARQTP 1782
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ E RP++ +A + +++CG H + T+ G VY G ND GQ
Sbjct: 1711 WGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQ 1770
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
LG I L L K++ +IS G H+ A
Sbjct: 1771 LGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE---TGCVYATGLN 98
WG+ D+G+LG G + + P + + H +K +ACG +H++ TE + C+ L+
Sbjct: 880 WGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTEITTSACIIDKPLS 938
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 153/329 (46%), Gaps = 20/329 (6%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G+ + R P+ + + A A G AH+L +T G V A G N G
Sbjct: 67 WGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVG 126
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG I S P+ + V ++ G++HS A+T G ++ WG NS GQLG G +
Sbjct: 127 QLGDGTTINRS-TPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V SG A G S+A+T G V +WG +G+LG G
Sbjct: 186 TNRSTPV--AVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTR------ 237
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ TP ++ G V A G HS + G +G+ V + L N R
Sbjct: 238 ---TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQ-LGDGSNINRD 293
Query: 281 PSLISKLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
S+ +LP V V GG H+ LTS G + +WGSN G LG G+ ++P V P
Sbjct: 294 ASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVSLP 353
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ + V+ G A+ S G +L WG
Sbjct: 354 PGVT-ITAVAAGDLFGLALTSAGTVLAWG 381
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 142/314 (45%), Gaps = 28/314 (8%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
V SA +H+ A T+ + V A G N +GQLG Y P+ + GL K
Sbjct: 39 VSSAIAQHTSVAQHRPSPTTV---ASDAVLAWGDNYYGQLGDGTTNNYRTVPIPV-GLPK 94
Query: 124 --EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
EV + G HS A+T G + WG+N+ GQLG G + P+ V G
Sbjct: 95 GTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPV--DVRLPPGTTVTA 152
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A GF S+A+T G V +WG +G+LG G T+ TP + G +
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR---------TNRSTPVAVSFPSGTVIT 203
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-LISKLPYSEEVVC---GG 297
AAG +HS + G V+ +GD + ++ +G R + ++ LP V GG
Sbjct: 204 AVAAGGMHSLALTSAGTVFAWGDNSTGQL--GDGTRTNRSTPVVVGLPVGTIVTAIAGGG 261
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
H+ +TS G WG+N G LG GS + V+ P + V V+ G H+ A+
Sbjct: 262 SHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTT-VTAVAGGLTHSLALT 320
Query: 357 SEGKILTWG---WG 367
S G +L+WG WG
Sbjct: 321 SVGTVLSWGSNNWG 334
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 122/292 (41%), Gaps = 15/292 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV ++ A+A G H+L LT G V+A G N GQ
Sbjct: 120 WGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ +S V+ ++ G HS A+T G ++ WG NS GQLG G +
Sbjct: 180 LGDGTRTNRS-TPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRT 238
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V G A G S+AVT G +WG G+LG G
Sbjct: 239 NRSTPV--VVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSN-----IN 291
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R S + ++ G V A G HS + G V +G ++ P
Sbjct: 292 RDASVH----VRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTP 347
Query: 282 SLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+S P V G LTS G + WG N G LG G+ V +P
Sbjct: 348 GSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 103/246 (41%), Gaps = 12/246 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV S + A+A GG H+L LT G V+A G N GQ
Sbjct: 172 WGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S + + V I+ G HS A+T G WG N GQLG G
Sbjct: 232 LGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNIN 291
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ + V G A G S+A+T G VLSWG+ G+LG G
Sbjct: 292 RDASV--HVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTAR------- 342
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TP + GV + AAG L + G V +G V + L RR
Sbjct: 343 --DRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQ-LGDGTTTVRRTP 399
Query: 283 LISKLP 288
+ + LP
Sbjct: 400 VAASLP 405
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 36/227 (15%)
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-------------VTGGGKVLSWGAGG 205
++AA+VI CL+ + T A G ++A VL+WG
Sbjct: 15 RRAARVI---AGWFCLAVVVTAVQAGGVSSAIAQHTSVAQHRPSPTTVASDAVLAWGDNY 71
Query: 206 SGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G +T+ Y P + +G +V AA G HS + G V +G
Sbjct: 72 YGQLGDG----------TTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWG 121
Query: 264 DRAVDKMLFQEGNHARRPSLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGC 319
AV ++ +G R + + +LP V V G+ H+ LTS G ++ WG N G
Sbjct: 122 RNAVGQL--GDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
LG G+ +P V P S + + V+ G H+ A+ S G + WG
Sbjct: 180 LGDGTRTNRSTPVAVSFP-SGTVITAVAAGGMHSLALTSAGTVFAWG 225
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WGN G+LG GS +R V ++ A+A G H+L LT G V + G N+
Sbjct: 273 ARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNN 332
Query: 100 FGQLGI----SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+GQLG N SL P + ++ G A+T G + WG N G
Sbjct: 333 WGQLGDGTARDRNTPGSVSLPP------GVTITAVAAGDLFGLALTSAGTVLAWGGNIVG 386
Query: 154 QLGLGKKAAKVIPI 167
QLG G + P+
Sbjct: 387 QLGDGTTTVRRTPV 400
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 160/341 (46%), Gaps = 32/341 (9%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEDEQILTPSQIPWKP-------DSAVNQVACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + PL+I L+ V+ QI+ G HS A+T G++ WG N
Sbjct: 59 ACGSNDYSQLGHELP---TKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG VI +P V L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGHASD-QDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVK 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
S + S Y RL L G+ A G H+ I ++ V+ +G ++
Sbjct: 175 SPSEL-----SQCNYPMRLTT-LLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228
Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ + P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 288
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
P R+ S + QV+CG +HT A+ S G+I +G G S
Sbjct: 289 P-RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSS 328
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 139/299 (46%), Gaps = 16/299 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP+ E + + +ACG H++ LTE G V + G N+ GQL
Sbjct: 61 GSNDYSQLG-HELPTK-RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ +
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178
Query: 163 -KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G + ++ V WG G+LG E
Sbjct: 179 LSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDE------- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 289
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
++ +L S +V CG HT L S G +Y +G +G LG + L+ P+ V GP
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVVIGP 348
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 109/238 (45%), Gaps = 27/238 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P I ELE + A G HS + E G+V +
Sbjct: 62 SNDYSQLGHELPTK-----------RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSW 110
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A D+ + Q R L+SK ++ CG H+ LT GELY+WGSN
Sbjct: 111 GDNECGQLGHASDQDVIQLPKIVRY--LVSKTVV--QIACGNNHSLALTCCGELYSWGSN 166
Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
G LG+ S L + P R+ P ++CG HT IS+ + +GWG ++
Sbjct: 167 IYGQLGVKSPSELSQCNYPMRLTTLLG-IPAAAIACGGNHTFLISKSSAV-FGWGRNN 222
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQ LG +
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQ--LGTRN 335
Query: 162 AKVIPIPTKV 171
K + +P V
Sbjct: 336 TKSLNLPQVV 345
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 159/334 (47%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P + + ++ +ACG +T+ +T G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +I+ G H+ A+ G+L+ WG N GQLGL
Sbjct: 64 GQLG-HEKARKRLQ--LIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L Q A G E S+A+T G++ SWG+ G+LG G
Sbjct: 121 VDCTE-RTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGS------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +E P+ I L V + A G H+ I ++G V+ +G ++ +
Sbjct: 174 --HTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L ++ CG + LT G ++T G+ G LG G+ P +V
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVM-E 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 291 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 141/318 (44%), Gaps = 16/318 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG ++R R + + K +ACG HTL + E G +++ G N GQL
Sbjct: 59 GNNDYGQLG--HEKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116
Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L V VQI+ G HS A+T DGELY WG N GQLG+G
Sbjct: 117 GLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTV 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I P ++ L+ + A G +V ++ G V +WG G+LG
Sbjct: 177 TEIK-PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLND--------- 226
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P ++ L KV AA G S + +G V+ G ++ G + P
Sbjct: 227 TQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
+ +L S ++ CG HT L S G +Y WG G LG + +P V GP+S
Sbjct: 287 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVVLGPWS 346
Query: 340 ESPVDQVSCGWKHTAAIS 357
+ + H+ I
Sbjct: 347 SASGSSMKFDLYHSPQID 364
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 17/227 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + I +P +V+ +Q A G +V +T G+V S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + L +LI L+ K A G H+ ++E G+++ +G
Sbjct: 61 NDYGQLGHEKARKRL-----------QLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ L R P ++ L S ++ CG H+ LT+ GELY+WGSN G L
Sbjct: 110 CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQL 169
Query: 321 GIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
GIGS V P+R+ + P+ ++CG HT IS+ G + WG
Sbjct: 170 GIGSHTVTEIKPKRIIT-LAAVPIAFIACGGYHTVVISKSGVVFAWG 215
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL + R P + ACG ++FLT G V+ G +GQ
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 274 LGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASR 333
Query: 162 AKVIPI 167
+ P+
Sbjct: 334 SATTPL 339
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 159/334 (47%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + ++ +ACG +T+ +T+ G +Y+ G ND+
Sbjct: 31 WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V + + G +H+ AI G+L+ WG N+ GQLGL
Sbjct: 91 GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + P V+ L Q A G + + A+T G++ SWG+ G+LG G +
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK--- 203
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+ I G+ + A G HS I ++G V+ +G ++ +
Sbjct: 204 -----YEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L ++ CG + LT G ++T G+ G LG GS P +V
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-E 317
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S V Q+SCG +HT A+ S G++ WG GG+
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 351
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + R R + + K ACG HTL + E G +++ G N GQL
Sbjct: 86 GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L VVQI+ G H+ A+T +GELY WG NS GQLGLG
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK 203
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I P + GI A G S+A++ G V WG G+LG L
Sbjct: 204 YEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLG----------LN 252
Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T + P ++ L+ K+ AA G S + +G V+ G ++ ++ P
Sbjct: 253 DTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILP 312
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ +L S ++ CG HT L S G +Y WG G LG S + +P+ V GP
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG +G+LGLG + I IP +++ +Q A G +V +T G++ S G
Sbjct: 27 DMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCG 86
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGH + L +LI L+ K AA G H+ I+E G+++ +
Sbjct: 87 NNDYGQLGHEKGRKRL-----------QLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 263 GDRAVDKMLFQEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
G ++ N P ++ L S ++ CG H LT+ GELY+WGSN G
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQ 195
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LG+G+ + F P+ ++CG H+ AIS+ G + WG
Sbjct: 196 LGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWG 242
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL + R P + + ACG ++FLT G V+ G +GQ
Sbjct: 241 WGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 300
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG N L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 301 LGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 561
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D SP V+ + V V CG TAAI
Sbjct: 622 TDDRSSPTLVEA-LKDKQVRTVVCGINFTAAI 652
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 36/321 (11%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 425
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
++ CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM-LPVRVEGKLHKNFVEEISCG 593
Query: 350 WKHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 594 AYHVAVLTSRTEVYTWGKGAN 614
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+ + + G +Y +G+ + ++ +P LI L
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
E V CG YHTC +T G+LYTWG ++ +G LG G+ +V H P+RV GP V
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 419
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G G+F GH
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFG----DGSFGVLGH 451
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 155/303 (51%), Gaps = 31/303 (10%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G +HTL L G V+A G ND+GQLG + I + P+ + GL K V IS G ++S A+
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDIN-SPIPVEGLNK-VSSISAGKYYSMAL 240
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
DG ++ WG+N GQLG G A ++ P+ +V+ LSGI + G S+A+ G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRLSPV--QVQNLSGIIAISS--GNSHSLALKDDGTV 296
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+WG SG+LG G + S+Y P ++ L G+ V I + GF +S + +G
Sbjct: 297 WAWGDNESGQLGDG---------TTNSKYIPSQVQGLSGI-VSI-SCGFYYSMALKNDGT 345
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
V+++GD ++ +G R + +S L + CG H+ L + G ++TWG N
Sbjct: 346 VWVWGDNTSGQL--GDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNA 403
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS------H 370
G LG G+ ++ + G + ++CG H+ A+ + + W WG + +
Sbjct: 404 FGQLGDGTKVSKNTAVPISGL---DGIIAITCGTSHSMALKDDGTV-WAWGDNQYGQLGN 459
Query: 371 GTF 373
GTF
Sbjct: 460 GTF 462
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 27/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G+ +R PV + A++ G +H+L L + G V+A G N+ GQ
Sbjct: 249 WGENDYGQLGDGTTATRLSPVQVQNLS--GIIAISSGNSHSLALKDDGTVWAWGDNESGQ 306
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N Y P ++ GL +V IS G+++S A+ DG +++WG N++GQLG G
Sbjct: 307 LGDGTTNSKYI--PSQVQGLSG-IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTT 363
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P V L G+ A G S+A+ G V +WG G+LG G +
Sbjct: 364 DRNTAVP--VSGLDGVI--AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTK------- 412
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S+ T I L+G+ G HS + ++G V+ +GD ++ P
Sbjct: 413 --VSKNTAVPISGLDGIIA--ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP 468
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSE 340
S +S L + + CG + L G ++ WG+NE G LG G + V++ E +
Sbjct: 469 SQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTET----LNI 524
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +S G H A+ ++G + WG
Sbjct: 525 GDIKAISIGSSHCLALKNDGTVWAWG 550
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 29/330 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LG + P+ K S +++ G +++ L G V+ G ND+GQL
Sbjct: 200 GENDYGQLGNNNTIDINSPIPVEGLNKVS--SISAGKYYSMALKSDGTVWTWGENDYGQL 257
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G L P+++ L ++ IS+G HS A+ DG ++ WG N +GQLG G +K
Sbjct: 258 G-DGTTATRLSPVQVQNLSG-IIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSK 315
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
IP++V+ LSGI + + GF S+A+ G V WG SG+LG G +
Sbjct: 316 Y--IPSQVQGLSGIVS--ISCGFYYSMALKNDGTVWVWGDNTSGQLGDG---------TT 362
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T T + L+GV A G HS + +G V+ +G A ++ +G + +
Sbjct: 363 TDRNTAVPVSGLDGVIA--IACGVNHSMALRNDGTVWTWGFNAFGQL--GDGTKVSKNTA 418
Query: 284 --ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
IS L + CG H+ L G ++ WG N+ G LG G+ +P +V + S
Sbjct: 419 VPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVS---NLS 475
Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
+ + CG+ + A+ +G + W WG +
Sbjct: 476 GIKSIFCGYSTSFALKPDGTV--WAWGNNE 503
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + G+LG G+ S++ P + +++CG +++ L G V+ G N GQ
Sbjct: 299 WGDNESGQLGDGTTNSKYIPSQVQGLS--GIVSISCGFYYSMALKNDGTVWVWGDNTSGQ 356
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + +SGL V+ I+ G +HS A+ DG ++ WG N+ GQLG G K +
Sbjct: 357 LGDGTTTDRN-TAVPVSGLDG-VIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVS 414
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P + L GI G S+A+ G V +WG G+LG+G F+
Sbjct: 415 KNTAVP--ISGLDGII--AITCGTSHSMALKDDGTVWAWGDNQYGQLGNGT------FIS 464
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L G+K G+ S + +G V+ +G+ ++ P+
Sbjct: 465 NT---TPSQVSNLSGIKSIF--CGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPT 519
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ + + G H L + G ++ WG N G LG G+ + P +V G S
Sbjct: 520 ETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGI---SG 576
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
+ +S G H+ A+ S+G + WG
Sbjct: 577 ITAISAGGSHSLALKSDGTVWAWG 600
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 140/326 (42%), Gaps = 36/326 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG LG G P +KA++ G +H L L G V+A G N +GQ
Sbjct: 499 WGNNEYGELGKGFTTRVIYP--TETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQ 556
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P+++SG+ + IS G HS A+ DG ++ WG+N+ GQLG G K
Sbjct: 557 LGDGTTTIKSL-PVQVSGISG-ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKED 614
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LSGI + +S A+ G V WG+ +S L +
Sbjct: 615 RNTPV--QVSELSGITVISNCI--YRSFALKNDGTVWVWGS----------DSYNLPLEK 660
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P I L G+ G H+ + +G V+ +G + P
Sbjct: 661 MT---MPIQISGLSGIIA--IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPV 715
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L + + GG + L S G ++ W G I V SP V+ +
Sbjct: 716 QVSGLSGVKAIAVGGNRSIALKSDGTVWQW----------GRILVSVSPSTVETWTTARQ 765
Query: 343 VD---QVSCGWKHTAAISEGKILTWG 365
VD ++ + A ++GK+ TWG
Sbjct: 766 VDGLSEIVSISNNVALKNDGKVFTWG 791
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 19/247 (7%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
++ ++++S G H+ A+ DG ++ G+N GQLG PIP VE L+ + +
Sbjct: 173 IEGPIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIP--VEGLNKVSSI 230
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G S+A+ G V +WG G+LG G ++ L +P ++ L G+
Sbjct: 231 SA--GKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL---------SPVQVQNLSGIIA 279
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
++G HS + ++G V+ +GD ++ N PS + L + CG Y++
Sbjct: 280 --ISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYS 337
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
L + G ++ WG N +G LG G+ ++ V G V ++CG H+ A+ ++G
Sbjct: 338 MALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGL---DGVIAIACGVNHSMALRNDG 394
Query: 360 KILTWGW 366
+ TWG+
Sbjct: 395 TVWTWGF 401
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+ G G+ + PV S +KA+A GG ++ L G V+ +G+
Sbjct: 695 WGKNNFGQFGDGTTTTTNIPVQVSGLS--GVKAIAVGGNRSIALKSDGTVW-----QWGR 747
Query: 103 LGIS---ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+ +S + ++ GL E+V IS ++ A+ DG+++ WG N GQLG G
Sbjct: 748 ILVSVSPSTVETWTTARQVDGLS-EIVSIS----NNVALKNDGKVFTWGANDYGQLGDGT 802
Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
A+V P +E ++G+ + S+ + G + +WG G+LG+G+
Sbjct: 803 TTARVTVAPVSGLEGVAGVASSDTT-----SMVLMNDGTIRAWGKNNFGQLGNGER 853
>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101229506 [Cucumis sativus]
Length = 1079
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 165/342 (48%), Gaps = 38/342 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLGLG + +P + A ++ +ACG HT +T G +Y G+++
Sbjct: 261 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 320
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG+ + +V ++ G H++ I+ G+L+ +G + G LG G
Sbjct: 321 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 379
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + I P +V+ L+G+ T A G + AV GK+ +WG G
Sbjct: 380 DKXS--ISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 437
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V+ G
Sbjct: 438 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVY 488
Query: 268 DKMLFQEGN-HA--RRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ GN HA ++P L+ KL +EEV CG YH VLTS E+YTWG NG LG
Sbjct: 489 GQL----GNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLG 544
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
G ++ SP V+ + V ++CG ++AAI K L+
Sbjct: 545 HGDVEDRKSPTLVES-LKDKHVKIIACGSNYSAAICLHKSLS 585
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 29/249 (11%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+ +T GE++ WG+ + G+LGLG K + P VE L+ A G + AVT
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEALAATTVDLVACGEFHTCAVT 305
Query: 194 GGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHS 250
G++ +WG G +G LG+G + S + P+ I LEG++V A G H+
Sbjct: 306 MDGELYTWGDGVHNAGLLGNGTD---------VSHWMPKRISGILEGLQVAYVACGPWHT 356
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS--- 305
A I G+++ FGD + + P + L + V CG +HT +
Sbjct: 357 ALISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIM 416
Query: 306 --------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
G+L+TWG + LG G + P V + +++CG T +
Sbjct: 417 TQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA-LIDYNFHKIACGHSITIGLT 475
Query: 357 SEGKILTWG 365
+ G++ T G
Sbjct: 476 TSGQVFTVG 484
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S VT G+V +WG GRLG LG + ++ PRL++ L V + A
Sbjct: 246 IRHSAIVTRQGEVFTWGEETGGRLG-------LGMGKDVTQ--PRLVEALAATTVDLVAC 296
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGG 297
G H+ + +G +Y +GD + L G P IS ++ Y V CG
Sbjct: 297 GEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAY---VACGP 353
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+HT +++S G+L+T+G G LG G + P V + V+CG HTAA+
Sbjct: 354 WHTALISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTI-AVACGVWHTAAVV 412
Query: 358 E------------GKILTWGWGGSH 370
E GK+ TWG G +
Sbjct: 413 EVIMTQSSTSIPSGKLFTWGDGDKN 437
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G F
Sbjct: 134 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 193
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P ++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 194 GLLGHGNDVSHWV-PKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 252
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 253 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 310
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 311 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 361
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 362 YGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 421
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D ++P V+ + V V CG TAAI
Sbjct: 422 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 452
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ ++CGG H +T+ G +Y+ G G+LG + S +P I L ++ ++ G
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVACG 170
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + G LG G + +P L GI + G +
Sbjct: 171 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCGPWHT 229
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG SI PR ++ L+G++ AA G H
Sbjct: 230 ALVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVWH 280
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ + P+ ++ L P +V
Sbjct: 281 TAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNFCQV 338
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG H
Sbjct: 339 ACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADGM-LPVRVEGKLHKNFVEEISCGAYHV 397
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 398 AVLTSRTEVYTWGKGAN 414
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 100 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 150
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 151 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHV 210
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT ++TS G+L+T+G G LG G + + P V+
Sbjct: 211 NGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLR 270
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GKI TWG G
Sbjct: 271 TV-RAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDG 308
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 32/344 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ + P ++ LE V I A G H+ ++E+GR+ +G+ ++ +
Sbjct: 177 PWPPGDIKQI--FVPVRVQGLE--NVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
P + L ++ GG+H+ LT GE+Y WG E+G LG G D
Sbjct: 233 TQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMV 292
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V +E + QVSCG H+ A++ +G+I ++G G HG
Sbjct: 293 PQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFG-RGDHGRL 334
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 126/301 (41%), Gaps = 30/301 (9%)
Query: 92 VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ A G + GQLGI N + +LEP + + +G +S AI DG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVR-------SVVSGSRNSLAICDDGTM 59
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG + K IP++V+ L+ + QAA+G +AV G+ +WG
Sbjct: 60 FTWGWNQRGTLGHPPET-KTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+ G +G P+ + + V+ AAG HS + G V+ +G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 265 RAVD---KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K +F P + L + G +H L G L WG+NE G LG
Sbjct: 177 PWPPGDIKQIFV-------PVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHS 379
G P V G + VD + GW TA +G++ WG G HG F ++ S
Sbjct: 230 TGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRLGFGDNDKS 288
Query: 380 S 380
S
Sbjct: 289 S 289
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Query: 54 GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
G ++ + PV E S+ +A G H L L E G + A G N++GQLG + S
Sbjct: 181 GDIKQIFVPVRVQGLENVSI--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS- 237
Query: 114 EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P+ + GL +V I+ G HS+A+T GE+Y WG+ +G+LG G +P KV
Sbjct: 238 HPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 297
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L+ Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 298 LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L +E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFT 179
P +P + G F
Sbjct: 340 VTTGQPLELPIMIPPPEGSFN 360
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 124 bits (312), Expect = 5e-26, Method: Composition-based stats.
Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 28/360 (7%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYM G NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
H+ + EN VY FG ++ +F+ +R P ++ + CG H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
T ++T G LYT+G +G LG+G + + + P F + V V+CG H +++
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 95/306 (31%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
++CG HT +TE G ++ G N++GQLG+ + +P + L+ E V+++ G H
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALRSERVKLTACGRTH 99
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
+ T G LY G N+ GQLGLG + T L F KQ A G S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDR-----TSFH-LVEFFNKQGPIKMLAAGSNTS 153
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ G G++G G+ES+ L TP+ + G +V + G+ H
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202
Query: 250 SACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + +G +Y FG++ K+ NH + P ++ +P +V CGG HT LT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
E+Y++G + G LG G+ RV F + V +CG HTA I++ +L
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 GDGRHG 326
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 561
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D SP V+ + V V CG TAAI
Sbjct: 622 TDDRSSPTLVEA-LKDKQVRTVVCGINFTAAI 652
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 36/321 (11%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 425
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
++ CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEISCG 593
Query: 350 WKHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 594 AYHVAVLTSRTEVYTWGKGAN 614
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+ + + G +Y +G+ + ++ +P LI L
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
E V CG YHTC +T G+LYTWG ++ +G LG G+ +V H P+RV GP V
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 419
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G G+F GH
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFG----DGSFGVLGH 451
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 155/338 (45%), Gaps = 34/338 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E RP + + ++ +ACG HT +T TG +Y G +
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
K + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + + L P + L A G + + +G+V G+
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
AV L + R P L+ E+V+ CG YH VLT+ E++TWG NG LG
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGH 387
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
G + P V+ + V ++CG TAAI + K
Sbjct: 388 GDTEDRKVPTLVEA-LKDRAVRYIACGANFTAAICQYK 424
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + + ++P P + + ++ G + + V
Sbjct: 35 GDVYVWGEVVCDTSVRTGSDTVISSTGRIDILLPKPLESNLVLDVY--HVDCGVKHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+V +WG GRLGHG + PRL++ L V A G H+
Sbjct: 93 MKNGEVFTWGEDSGGRLGHGTREDCV---------RPRLVESLTVSNVDFVACGEFHTCA 143
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLT 304
+ G +Y +GD + L GN P IS ++ Y V CG +HT ++T
Sbjct: 144 VTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAY---VSCGTWHTALIT 200
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------ 358
S G+L+T+G G LG G + + P V+ S V+CG HTAAI E
Sbjct: 201 SMGQLFTFGDGSFGVLGHGDLKSVSYPREVES-LSGLKTIAVACGVWHTAAIVEVIVTRS 259
Query: 359 --------GKILTWGWGGSH 370
GK+ TWG G H
Sbjct: 260 SSSVKLSAGKLFTWGDGDKH 279
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 32/271 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ + +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCV--RPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + P+
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGND---------VGHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG++V + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVLT-------------SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCV- 295
Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +V+CG T A+ + G++L+ G
Sbjct: 296 ATLIDHDFYRVACGHSLTVALTTSGQVLSMG 326
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ ST L K LE + V G H+A + +NG V+ +G+ + ++
Sbjct: 56 VISSTGRIDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTRE 115
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
RP L+ L S + V CG +HTC +T+ GELYTWG + G LG G+ DV H P
Sbjct: 116 DCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGN-DVGHWIP 174
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+R+ G V VSCG HTA I S G++ T+G G+F GH
Sbjct: 175 KRISGALEGLQVAYVSCGTWHTALITSMGQLFTFG----DGSFGVLGH 218
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 380 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 439
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 440 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 498
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 499 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 556
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 557 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 607
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 608 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 667
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D SP V+ + V V CG TAAI
Sbjct: 668 TDDRSSPTLVEA-LKDKQVRTVVCGINFTAAI 698
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 36/321 (11%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 355 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 413
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 414 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 471
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 472 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 522
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 523 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 580
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
++ CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG
Sbjct: 581 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEISCG 639
Query: 350 WKHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 640 AYHVAVLTSRTEVYTWGKGAN 660
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+ + + G +Y +G+ + ++ +P LI L
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
E V CG YHTC +T G+LYTWG ++ +G LG G+ +V H P+RV GP V
Sbjct: 407 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 465
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G G+F GH
Sbjct: 466 SAISCGPWHTAIVTSAGQLFTFG----DGSFGVLGH 497
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG+G+ + + SA + + + +A H+L LT++G V++ G D+
Sbjct: 543 GEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDY 602
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVV ++ G+ HS+ +TVDG+L+ +G G+LG G
Sbjct: 603 GKLG-HGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
A K P +V L Q A G ++ ++ G V ++G G G+LG G
Sbjct: 662 SANK--KTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGS----- 714
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
T++ +P+ I L G+ K G S + +GRV+ FG +
Sbjct: 715 ----CTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGP 770
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
++P I L + ++V G H LTS GE++ WG+N +G LG+G + P +
Sbjct: 771 QKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPD 830
Query: 337 PFSESPVDQVSCGWKHTAA 355
+ Q+S G H+AA
Sbjct: 831 -LKGKNIRQISAGRNHSAA 848
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 158/340 (46%), Gaps = 30/340 (8%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A LWG G +G+L S P V + S + + CG T + G + A G
Sbjct: 490 AYLWGGGRHGQLA-ESGRGVNVPTVTKSLA--SAQQVVCGQNCTFVVQVNGTILACGEGS 546
Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVV-QISTGY---HHSSAITVDGELYMWGKNSNG 153
+G+LG+ S+++ ++L P IS L+ VV QI+T HS A+T GE++ WG G
Sbjct: 547 YGRLGMGNSDDL-FTLSP--ISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYG 603
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + P ++E L G A GF+ S VT GK+ ++G G GRLGHG
Sbjct: 604 KLGHGNSDRQR--RPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLF 272
S ++ TP + LE + A G H+ + +G V+ FGD K+
Sbjct: 662 ---------SANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGL 712
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P I L +++ CG + VLT+ G ++++G G +
Sbjct: 713 GSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQK 772
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
P+++Q + +D V G +H A+ S G++ WGWG +
Sbjct: 773 PQQIQA-LASHFIDDVCVGAEHVLALTSTGEV--WGWGNN 809
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + +ACG H+ +T G ++ G D+G+
Sbjct: 597 WGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGR 656
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG N P R++ L+K + Q++ G +H+ ++ DG ++ +G G+LGLG
Sbjct: 657 LG-HGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSC 715
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P ++ L+GI K+ G + SV +T G+V S+ G RL E + G
Sbjct: 716 TAKT--SPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSF---GQERLTGQPEGRLRG- 769
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I+ L + G H + G V+ +G+ ++ N R
Sbjct: 770 -----PQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQRE 824
Query: 281 PSLISKL 287
P +I L
Sbjct: 825 PCVIPDL 831
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ Y+WG +GQL ++ + + +PT + L+ +Q G + V G +L+ G
Sbjct: 489 DAYLWGGGRHGQLA---ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACG 543
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIAAA--GFLHSACIDENGRV 259
G GRLG G + +T I L+G V ++IA + HS + ++G V
Sbjct: 544 EGSYGRLGMGNSDDL---------FTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEV 594
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T G+L+T+G+ +
Sbjct: 595 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-RGEEVVNMACGFKHSAVVTVDGKLFTFGNGD 653
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
G LG G+ +PERV + + QV+CG HT +S W +G G +G
Sbjct: 654 YGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKL 710
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 137/327 (41%), Gaps = 17/327 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ P+ ++ A+A G H+L +T G A G N FGQ
Sbjct: 77 WGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQ 136
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ + V I+ G HS A+T G WG N G+LG G
Sbjct: 137 LGDGSTTDSS-TPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTT 195
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V+ +G A G S+A+T G VL+WG G+LG G
Sbjct: 196 RRDTPV--DVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGT-------- 245
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP + G V AAG LHS + G + +G+ + ++ ++ P
Sbjct: 246 -TTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTP 304
Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ LP S + G H+ +TS G WG N++G LG G+ +P V P
Sbjct: 305 IAV-NLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPA 363
Query: 339 SESPVDQVSCGWKHTAAISEGKILTWG 365
+ + A + G IL WG
Sbjct: 364 DTTVTATTAGSLHSLAVTTAGTILAWG 390
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 125/300 (41%), Gaps = 19/300 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +G+LG GS P+ ++ A+A G H+L +T G A G ND G+
Sbjct: 129 WGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGE 188
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG P+ + V I+ G HS A+T G + WG NS+GQLG G
Sbjct: 189 LGDGTTTRRD-TPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTT 247
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
PI V+ +G A G S+AVT G +L+WG G+LG G
Sbjct: 248 DSSTPI--AVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGT-------- 297
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T+ TP + + G HS + G +GD D +G
Sbjct: 298 -TTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDN--DDGQLGDGTTTNSS 354
Query: 282 SLIS-KLP---YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ I+ LP G H+ +T+ G + WG+N +G LG G+ +P V P
Sbjct: 355 TPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTTTNSSTPIAVNLP 414
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 86/215 (40%), Gaps = 23/215 (10%)
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-----VLSWGAGGSGRLGHGQE 214
+A +V+ T CL+ T L +VA G + VL+WG G LG G
Sbjct: 34 RAGRVV---TGAFCLALAVTLAQTLSVSPTVAQNGPSRDASDTVLAWGDNKDGELGDGT- 89
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T TP + G + AAG HS + G +G+ ++
Sbjct: 90 --------TTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGS 141
Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ P + LP V G H+ +TS G WG N+ G LG G+ +P
Sbjct: 142 TTDSSTPIAV-DLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTP 200
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V P + V ++ G H+ A+ S G +LTWG
Sbjct: 201 VDVDLPAGTT-VTAIAAGIGHSLALTSAGTVLTWG 234
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 23/285 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG+LG SR + S+ E ++ ++CG H++ + + G +Y+ G GQL
Sbjct: 59 GQNPYGQLGRKGNNSRIEQI--SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQL 116
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P RI+GL ++++QIS G HS A+ DG ++ WG+N GQLGLG +
Sbjct: 117 GTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ L GI Q G Q+ A++ G V +WG +G+LG ++
Sbjct: 177 NQ-ATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDA------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + L + V + G H+A ++++G VY FGD ++ Q GN P
Sbjct: 229 KKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQ 288
Query: 283 LISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
I + YS +V CG YHT LY + N G GS
Sbjct: 289 KIEE--YSRQVSQVACGRYHTL-------LYVFTCNRIVSFGKGS 324
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 179/361 (49%), Gaps = 36/361 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+L + E + + +K S++ ++ G H+L+L + G + + G N +
Sbjct: 4 WGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N +E +IS L+ + +V +S G +HS A+ +G +Y WG S GQLG GK
Sbjct: 64 GQLGRKGN-NSRIE--QISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGK 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++K P ++ L Q + G SVA+ G+V SWG G+LG G S I+
Sbjct: 121 FSSKNF-TPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLG--SQII- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++ TP+L+K L+G+ + AG + + +G V+ +G ++ F+ N A+
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFK--NDAK 229
Query: 280 RPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ + PY+ + + CG HT VL G +YT+G + G LG S +
Sbjct: 230 KGTF---KPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSV 286
Query: 331 PERVQGPFSESPVDQVSCGWKHTA--AISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQ 388
P++++ +S V QV+CG HT + +I+++G G + S Q + Q
Sbjct: 287 PQKIEE-YSRQ-VSQVACGRYHTLLYVFTCNRIVSFGKGSQR---QQGNDESSDQAEASQ 341
Query: 389 L 389
L
Sbjct: 342 L 342
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQL + ++ +V+ ++ ++G + S+ + G +LS G
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60
Query: 204 GGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G S I I LE + + G HS + + G +Y +
Sbjct: 61 NPYGQLGRKGNNSRI------------EQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSW 108
Query: 263 GDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
GD + ++ F N P I+ L + ++ CG +H+ L G +++WG N+
Sbjct: 109 GDGSEGQLGTGKFSSKNFT--PKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKC 166
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
G LG+GS + + ++ P+ QV+ G T A+S G + WG
Sbjct: 167 GQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWG 215
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S +R PV S + A+A G HT+ L G V+A G N+ GQ
Sbjct: 167 WGANWNGQLGDESTTNRSTPVQVSGLTD--VIAIAGGAYHTIALKSDGTVWAWGNNEGGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ I+ GY H+ A+ DG ++ WG N G+LG G
Sbjct: 225 LGDGSTTDRS-TPVQVSGL-TDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTN 282
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP+ KV LS + A G ++A+ G V +WG G+LG G
Sbjct: 283 RSIPV--KVGGLSDVI--AIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGS--------- 329
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V A G+ H+ + +G V+ +G ++ + P
Sbjct: 330 TTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPV 387
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L + G YHT + S G ++ WG N G LG G+ +P +V G +
Sbjct: 388 QVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNG---LTD 444
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
V ++ G+ HT A+ S+G + TWG
Sbjct: 445 VIAIAGGYYHTIAMKSDGAVWTWG 468
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 154/322 (47%), Gaps = 23/322 (7%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
+LG GS PV S A+A G HT+ L G V+ G N+ GQLG I
Sbjct: 622 QLGDGSTTDSSTPVQVSGLTD--AIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTI 679
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
S P+++ GL +V+ I+ G +H+ A+ DG ++ WG N GQLG G + P+
Sbjct: 680 NRS-TPVQVIGLT-DVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPV-- 735
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+V+ L+ I A G+ S+A+ G V +WG G G+LG G +T TP
Sbjct: 736 QVKGLADII--AIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGS---------TTDHLTP 784
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L + A G++H+ + +G V+ +G ++ ++ P +S L
Sbjct: 785 VQVSGL--TDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD 842
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
V YHT L S G ++TWG N G LG GS P +V G + V ++ G
Sbjct: 843 VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIG---LTDVIAIAGG 899
Query: 350 WKHTAAI-SEGKILTWGWGGSH 370
+ HT A+ S+G + WG+ G++
Sbjct: 900 YYHTIALKSDGAVWAWGYNGNN 921
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 139/291 (47%), Gaps = 19/291 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN + G+LG GS R PV S + A+A G AHT+ L G V+A G N+ G+
Sbjct: 217 WGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIAIAGGYAHTIALKSDGTVWAWGDNEGGR 274
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ P+++ GL +V+ I+ G H+ A+ DG ++ WG N GQLG G
Sbjct: 275 LGDGSTTNRSI-PVKVGGLS-DVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTN 332
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ KV L+ + A G+ ++ + G V +WG G+LG G
Sbjct: 333 RSTPV--KVSGLADVI--AIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGS--------- 379
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V A G H+ + +G ++ +G ++ ++ P
Sbjct: 380 TTNRSTPVQVSGLA--DVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPV 437
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
++ L + G YHT + S G ++TWG N G LG GSI +P +
Sbjct: 438 QVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQ 488
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 142/293 (48%), Gaps = 23/293 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+ G N GQLG E+ P+++SGL +V+ I+ G +H+
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLG-DESTTNRSTPVQVSGLT-DVIAIAGGAYHT 205
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N GQLG G + P+ +V L+ + A G+ ++A+
Sbjct: 206 IALKSDGTVWAWGNNEGGQLGDGSTTDRSTPV--QVSGLTDVI--AIAGGYAHTIALKSD 261
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG GRLG G +T+ P + L V A G H+ +
Sbjct: 262 GTVWAWGDNEGGRLGDGS---------TTNRSIPVKVGGLS--DVIAIAGGNAHTIALKS 310
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGS 314
+G V+ +GD ++ + P +S L + GGY HT VL S G ++TWG
Sbjct: 311 DGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLA-DVIAIAGGYSHTIVLRSDGTVWTWGH 369
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
NE G LG GS +P +V G + V ++ G HT A+ S+G + WG+
Sbjct: 370 NEGGQLGDGSTTNRSTPVQVSG---LADVIAIAGGVYHTIAVKSDGTMWAWGY 419
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 141/293 (48%), Gaps = 23/293 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+A G N GQLG I S P+++SGL +V+ I+ G +H+
Sbjct: 1044 ISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS-TPVQVSGLT-DVIAIAGGDYHT 1101
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ D ++ WG NS GQLG G + IP P V L+ I A G+ ++A+
Sbjct: 1102 IALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNII--AIAGGYVHTIALKSD 1157
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG-FLHSACID 254
G V +WG G G+LG G +T+ TP + L V IA AG ++H+ +
Sbjct: 1158 GTVWAWGYNGYGQLGDGS---------TTNRSTPVQVSGLTDV---IAIAGEYVHTVALK 1205
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+G V+ +G ++ + P +S L + G HT L S G ++TWG
Sbjct: 1206 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGW 1265
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
N +G LG G+ +P +V G + ++ G HT A+ + W WG
Sbjct: 1266 NNSGQLGDGTTINRLTPVQVSG---LTDAIAIAGGDYHTIALKSDNTV-WAWG 1314
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 25/282 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G++ +R P + + A+A G HT+ L G V+A G N +GQ
Sbjct: 1113 WGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVHTIALKSDGTVWAWGYNGYGQ 1170
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ I+ Y H+ A+ DG ++ WG N GQLG G
Sbjct: 1171 LGDGSTTNRS-TPVQVSGLT-DVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTN 1228
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+ + A G+ ++A+ G V +WG SG+LG G
Sbjct: 1229 RSTPV--QVSGLTDVI--AIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGT--------- 1275
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ + TP ++ G+ IA A G H+ + + V+ +G + ++ +G R
Sbjct: 1276 TINRLTP---VQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQL--GDGTTINRL 1330
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P +S L + + G YHT L S ++ WGSN G LG
Sbjct: 1331 TPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1372
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 149/322 (46%), Gaps = 29/322 (9%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG G+ +R PV S + A+A G HT+ L V+A G N +GQLG
Sbjct: 1069 GQLGDGTTINRSTPVQVSGLTD--VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTI 1126
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
S+ P ++ L ++ I+ GY H+ A+ DG ++ WG N GQLG G + P+
Sbjct: 1127 TNRSI-PTPVTYLTN-IIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQ 1184
Query: 169 TKVECLSGIFTKQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+SG+ A G + +VA+ G V +WG G G+LG G +T+
Sbjct: 1185 -----VSGLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGS---------TTNRS 1230
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS 285
TP + L V A G++H+ + +G V+ +G ++ +G R P +S
Sbjct: 1231 TPVQVSGL--TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQL--GDGTTINRLTPVQVS 1286
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
L + + G YHT L S ++ WGSN G LG G+ +P +V G +
Sbjct: 1287 GLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSG---LTDAIA 1343
Query: 346 VSCGWKHTAAISEGKILTWGWG 367
++ G HT A+ + W WG
Sbjct: 1344 IAGGDYHTIALKSDNTV-WAWG 1364
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 21/291 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+A G N QLG S P+++SGL + + I+ G +H+
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSS-TPVQVSGL-TDAIAIAGGVYHT 653
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N++GQLG G + P+ +V L+ + A G ++A+
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRSTPV--QVIGLTDVI--AIAGGDYHTIALKSD 709
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G +T+ TP +K L + A G++HS +
Sbjct: 710 GTVWTWGFNYYGQLGGGA---------TTNRSTPVQVKGLA--DIIAIAGGYVHSIALKS 758
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V+ +G ++ P +S L + G HT L S G ++ WG N
Sbjct: 759 DGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHN 818
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
E G LG G+ +P +V G + V V+ HT A+ S+G + TWG
Sbjct: 819 EGGQLGDGTTTNSSTPVQVSG---LTDVIAVTARLYHTIALKSDGTVWTWG 866
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 23/293 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +R PV + A+A G HT+ L G V+ G N +GQ
Sbjct: 665 WGWNNSGQLGDGTTINRSTPVQVIGLTD--VIAIAGGDYHTIALKSDGTVWTWGFNYYGQ 722
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++ GL +++ I+ GY HS A+ DG ++ WG N GQLG G
Sbjct: 723 LGGGATTNRS-TPVQVKGLA-DIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTD 780
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+ I A G+ ++A+ G V +WG G+LG G
Sbjct: 781 HLTPV--QVSGLTDII--AIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGT--------- 827
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V A H+ + +G V+ +G ++ +G+ R
Sbjct: 828 TTNSSTPVQVSGL--TDVIAVTARLYHTIALKSDGTVWTWGRNIYGQL--GDGSTTERSL 883
Query: 283 LISKLPYSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + ++ + G YHT L S G ++ WG N N LG S +P R
Sbjct: 884 PVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVR 936
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 160/358 (44%), Gaps = 43/358 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + G+LG GS +R PV S + A+A G HT+ + G ++A G N +GQ
Sbjct: 367 WGHNEGGQLGDGSTTNRSTPVQVSGLAD--VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQ 424
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S P++++GL +V+ I+ GY+H+ A+ DG ++ WG N GQLG G
Sbjct: 425 LGDGTTINSS-TPVQVNGLT-DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITN 482
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQES---- 215
+ P + + + T G V+++ G V G + +G +
Sbjct: 483 RSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNGNGVATTAWFDYGTSTGMYF 542
Query: 216 ----------------SILGFLRSTSEYTPRLIKELEG-----------VKVKIAAAGFL 248
+ LG L + Y R+ + G + +I+A +
Sbjct: 543 DATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQISAGAY- 601
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
H+ + +G V+ +G ++ + P +S L + + G YHT L S G
Sbjct: 602 HTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGT 661
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
++TWG N +G LG G+ +P +V G + V ++ G HT A+ S+G + TWG
Sbjct: 662 VWTWGWNNSGQLGDGTTINRSTPVQVIG---LTDVIAIAGGDYHTIALKSDGTVWTWG 716
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 117/265 (44%), Gaps = 31/265 (11%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QIS G +H+ + DG ++ WG N NGQLG + P+ +V L+ + A G
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPV--QVSGLTDVI--AIAGGA 202
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ G V +WG G+LG G +T TP + L V A G
Sbjct: 203 YHTIALKSDGTVWAWGNNEGGQLGDGS---------TTDRSTPVQVSGL--TDVIAIAGG 251
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
+ H+ + +G V+ +GD ++ + P + L + G HT L S
Sbjct: 252 YAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHTIALKSD 311
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G ++ WG NE G LG GS +P +V G + V ++ G+ HT + S+G + TW
Sbjct: 312 GTVWAWGDNEGGQLGDGSTTNRSTPVKVSG---LADVIAIAGGYSHTIVLRSDGTVWTW- 367
Query: 366 WGGSHGTFSEDGHSSGGQLDRGQLT 390
GH+ GGQL G T
Sbjct: 368 -----------GHNEGGQLGDGSTT 381
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 19/244 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QIS G +H+ + DG ++ G N NGQLG G + P+ +V L+ + A G
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPV--QVSGLTDVI--AIAGGD 1098
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ V +WG+ G+LG G T+ P + L + A G
Sbjct: 1099 YHTIALKSDNTVWAWGSNSYGQLGDGTI---------TNRSIPTPVTYL--TNIIAIAGG 1147
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
++H+ + +G V+ +G ++ + P +S L + HT L S
Sbjct: 1148 YVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSD 1207
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G ++ WG N G LG GS +P +V G + V ++ G+ HT A+ S+G + TWG
Sbjct: 1208 GTVWAWGYNGYGQLGDGSTTNRSTPVQVSG---LTDVIAIAGGYVHTIALKSDGTVWTWG 1264
Query: 366 WGGS 369
W S
Sbjct: 1265 WNNS 1268
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 33/270 (12%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-AL 184
QIS G +H+ + DG ++ +G N N QLG G P+ +SG+ A A
Sbjct: 594 TQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQ-----VSGLTDAIAIAG 648
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A+ G V +WG SG+LG G + + TP + L V A
Sbjct: 649 GVYHTIALKSDGTVWTWGWNNSGQLGDG---------TTINRSTPVQVIGL--TDVIAIA 697
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
G H+ + +G V+ +G ++ + P + L + G H+ L
Sbjct: 698 GGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALK 757
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 363
S G ++ WG N G LG GS +P +V G + + ++ G+ HT A+ S+G +
Sbjct: 758 SDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSG---LTDIIAIAGGYIHTIALKSDGTVWA 814
Query: 364 WGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
W GH+ GGQL G T S
Sbjct: 815 W------------GHNEGGQLGDGTTTNSS 832
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +R PV S A+A G HT+ L V+A G N +GQ
Sbjct: 1263 WGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQ 1320
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I L P+++SGL + + I+ G +H+ A+ D ++ WG NS GQLG A
Sbjct: 1321 LGDGTTIN-RLTPVQVSGLT-DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTAN 1378
Query: 163 KVIPIPTKVECL 174
+ P +CL
Sbjct: 1379 SLTP----AQCL 1386
>gi|195996231|ref|XP_002107984.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
gi|190588760|gb|EDV28782.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
Length = 347
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 151/326 (46%), Gaps = 23/326 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL----TETGCVYATGLND 99
G YG+LGLG + + P K + GG H++FL ETG +YA G N+
Sbjct: 31 GANSYGQLGLGHTDDKITPQKMPNL-NFKPKWIGGGGGHSVFLDVYVAETGELYACGWNN 89
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ L+ L + +++ G++H+ A++V+G+LY WG N+ GQLG
Sbjct: 90 NGQLGLEHQ--DNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNAFGQLGHSP 147
Query: 160 KA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +I PT +E +S G + AV G+ SWGA G+LG G+ I+
Sbjct: 148 CSRGSIINTPTLIEDISDREFIDTCAGLRHTHAVEACGQTWSWGACKKGQLGIGERMDIV 207
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P LI L G++VK AG HSAC+ E G V+ +G + + +
Sbjct: 208 --------EKPVLISTLRGIRVKKVVAGSYHSACLTECGEVFCWGSNRYGQCTLADKTES 259
Query: 279 RRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P IS ++ G H + GG +Y+WG + G LG + S
Sbjct: 260 LIPVKISSESCVNKCFIDIHSGWSHVVAVVEGGIVYSWGRCDYGQLGYTELSDGDSKRYQ 319
Query: 335 QGPF---SESPVDQVSCGWKHTAAIS 357
Q P + + Q++CG +H IS
Sbjct: 320 QEPACVPNLHDLRQIACGSEHNIVIS 345
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 18/198 (9%)
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
T LGF A W G +GQ LG + + TP+ + L
Sbjct: 6 ITAYTVLGF----ATANCSIDFVWSQRQQGANSYGQ----LGLGHTDDKITPQKMPNLN- 56
Query: 238 VKVKIAAAGFLHSACID----ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
K K G HS +D E G +Y G ++ + ++ R +S ++V
Sbjct: 57 FKPKWIGGGGGHSVFLDVYVAETGELYACGWNNNGQLGLEHQDNVTRLQKLSLPIRMQKV 116
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSI---DVLHSPERVQGPFSESPVDQVSCGW 350
CG HT L+ G+LY+WGSN G LG ++++P ++ +D + G
Sbjct: 117 ACGWNHTIALSVEGKLYSWGSNAFGQLGHSPCSRGSIINTPTLIEDISDREFIDTCA-GL 175
Query: 351 KHTAAISEGKILTWGWGG 368
+HT A+ E TW WG
Sbjct: 176 RHTHAV-EACGQTWSWGA 192
>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Anolis carolinensis]
Length = 409
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 159/349 (45%), Gaps = 34/349 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG+LGLG E + P V F + ++K + GG H+ LT+TG ++ G N
Sbjct: 15 WGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCGQNKN 74
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + L S V+Q++ G+ + + G+++ G NS GQLG+ +
Sbjct: 75 GQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQLGI-SQ 133
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
++ + ++E L AA G ++AVT G V WG G S + Q +
Sbjct: 134 TSEGSTVSKRIESLQEKVVNVAA-GLRHALAVTENGSVFQWGIGMSSQAKRACQGEMVPS 192
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
FLR+ P + LE +VKI A+G H+ + + G +Y++G+ K L + +
Sbjct: 193 FLRARQ---PCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNK-HKQLVNKDDFVL 248
Query: 280 RPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI---------- 325
+P I + E V G H T G+++TWG + G LG +
Sbjct: 249 KPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRSGLPYEQMGQDGK 308
Query: 326 --------DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+ LHSP V S Q++CG +H AI G+ +WGW
Sbjct: 309 ASDENSVKEPLHSPALVPALTGAS---QIACGSEHNLAIVGGQCFSWGW 354
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 43/343 (12%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
L G G+LGLG E +CS+ S+ +ACG T+ L +G V++ G N FG
Sbjct: 68 LCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFG 127
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLGIS+ S RI L+++VV ++ G H+ A+T +G ++ WG + Q K+A
Sbjct: 128 QLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGMSSQ---AKRA 184
Query: 162 AK--VIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ ++P P KV L K A G + A+T G++ WG +L + +
Sbjct: 185 CQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKHKQLVN-K 243
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--------- 264
+ +L + + Y G KV+ G+ H E G+V+ +G
Sbjct: 244 DDFVLKPQKIDAHY-------FGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRS 296
Query: 265 -----------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+A D+ +E H+ P+L+ L + ++ CG H + GG+ ++WG
Sbjct: 297 GLPYEQMGQDGKASDENSVKEPLHS--PALVPALTGASQIACGSEHNLAIV-GGQCFSWG 353
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NE+G G G+ + +P+ + S + + V CG H+ A
Sbjct: 354 WNEHGMCGNGTEANVCAPQPLD-VLSSAKLLYVGCGAGHSMAF 395
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 31/290 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWG 148
++ G N +GQLG+ L P + G ++ V I+ G HS+ +T GEL++ G
Sbjct: 12 LFTWGANSYGQLGLGHREDVFL-PQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCG 70
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+N NGQLGLG + + L G Q A G++ ++ + G G+V S G+ G+
Sbjct: 71 QNKNGQLGLGH--TEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQ 128
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFG--- 263
LG + TSE + + K +E ++ K+ AAG H+ + ENG V+ +G
Sbjct: 129 LG----------ISQTSEGS-TVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGM 177
Query: 264 ----DRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
RA + AR+P ++ L + + V G H LT GELY WG+N++
Sbjct: 178 SSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKH 237
Query: 318 GCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
L + D + P+++ F V +V GW H A +E GK+ TWG
Sbjct: 238 KQL-VNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWG 286
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 151/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G F
Sbjct: 373 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 432
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P ++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 433 GLLGHGNDISHWV-PKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 491
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 492 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 549
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + L P + L A G + + +G VY G
Sbjct: 550 GRLGHGDKGPKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 600
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 601 YGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGD 660
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D ++P V+ + V V CG TAAI
Sbjct: 661 TDDKNTPTLVEA-LKDKQVRIVVCGINFTAAI 691
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
++ ++CGG H +T+ G +Y+ G G+LG + S +P I L ++ ++ G
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVACG 409
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+H+ A+T+ G+LY WG + G LG G + +P L GI + G +
Sbjct: 410 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGP-LEGIHVSSISCGPWHT 468
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ ++G G G LGHG SI PR ++ L+G++ AA G H
Sbjct: 469 AVVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVWH 519
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
+A + E +G+++ +GD DK G+ + P+ ++ L P +V
Sbjct: 520 TAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKGPKLVPTCVAALVEPNFCQV 577
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG H
Sbjct: 578 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGM-LPVRVEGKLHKNFVEEISCGAYHV 636
Query: 354 AAI-SEGKILTWGWGGS 369
A + S+ ++ TWG G +
Sbjct: 637 AVLTSKTEVYTWGKGAN 653
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 339 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 389
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 390 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHV 449
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT V+TS G+L+T+G G LG G + + P V+
Sbjct: 450 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLR 509
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V + +CG HTAA+ E GKI TWG G
Sbjct: 510 TV-RAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDG 547
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
P+ ++ + V+ + G H+A + + G +Y +G+ + ++ +P LI L
Sbjct: 339 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDAL 398
Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESP 342
+ E V CG YHTC +T G+LYTWG + G LG G+ D+ H P+ V GP
Sbjct: 399 SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPKHVNGPLEGIH 457
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
V +SCG HTA + S G++ T+G G+F GH
Sbjct: 458 VSSISCGPWHTAVVTSAGQLFTFG----DGSFGVLGH 490
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 150/342 (43%), Gaps = 50/342 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 334 WGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNC 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 394 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDENGRVYIFGD 264
GRLGHG + + L R L VK HS + G VY G
Sbjct: 511 GRLGHGDKEAKLVPTRVA----------LVNVKPNFCQVACGHSLTVALTTKGHVYTMGS 560
Query: 265 RAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGS 314
++ P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 561 PVYGQLGI--------PQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGK 612
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D ++P V+ + V ++CG TAAI
Sbjct: 613 GANGRLGHGDTDDRNTPTLVEA-LKDKDVKSIACGTNFTAAI 653
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 41/321 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G +++ G G+L G+ ++ L P I L ++ ++
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV---LHPKLIEALSNTNIELVA 368
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 369 CGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHW--VPKRVNGPLEGIHVSYISCGP 426
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 427 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAACG 477
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPY 289
H+A + E +G+++ +GD DK G+ R +L++ P
Sbjct: 478 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTRVALVNVKPN 535
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+V CG T LT+ G +YT GS G LGI D P V+ SES V++++CG
Sbjct: 536 FCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADG-KLPICVEWKLSESFVEEIACG 594
Query: 350 WKHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 595 AYHVAVLTSRTEVYTWGKGAN 615
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 40/254 (15%)
Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++++WG+ + N ++G LG K + P +E + + A G +
Sbjct: 267 GDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFP--KSLESAVVLDVQNIACGGRHAAL 324
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G++ SWG GRLGHG +S +L P+LI+ L +++ A G H+
Sbjct: 325 VTKQGEIFSWGEEAGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHTC 375
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
+ +G +Y +G+ + L GN P ++ + + + CG +HT V+TS
Sbjct: 376 AVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 435
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
G+L+T+G G LG G + P V+ V + +CG HTAA+ E
Sbjct: 436 GQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSS 494
Query: 359 -----GKILTWGWG 367
GK+ TWG G
Sbjct: 495 SNCSSGKLFTWGDG 508
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G ++ +G+ A ++ + P LI L
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGC--LGIGSIDVLHSPERVQGPFSESPVD 344
+ E V CG YHTC +T G+LYTWG+ C LG G+ P+RV GP V
Sbjct: 361 NTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVS 420
Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 421 YISCGPWHTAVVTSAGQLFTFG----DGTFGALGH 451
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 2647 GEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2706
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 2707 KLGHGNCISLD-KPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 2765
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2766 ITQTRP--KLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 2818
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP + L G+ V G S + + G V+ +G ++ +H
Sbjct: 2819 ----SDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 2874
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 2875 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHD 2934
Query: 337 PFSESPVDQVSCGWKHTAA 355
++ V++VSCG H+ A
Sbjct: 2935 -LEDARVNRVSCGSSHSIA 2952
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 2700 WGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 2759
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + I + L + + + VVQ++ G + A+T DG +Y WG G+LG G
Sbjct: 2760 LGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 2819
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2820 DGCYTPL--AVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 2874
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN A
Sbjct: 2875 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGATS 2924
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
R+PSL+ L + V CG H+
Sbjct: 2925 VNRKPSLVHDLEDARVNRVSCGSSHS 2950
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 140/315 (44%), Gaps = 26/315 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y LG K C +R L NG+ + GS E+++ P+ F
Sbjct: 93 TPFYCDPIAGLGIKQLCCT-------ERSLMILSLNGNAYNMYHGS-ETQY-PLRVHGFS 143
Query: 70 KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + + Y L S L K +V
Sbjct: 144 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVF 203
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++ GELY WG+ + G+LG G + PT V L G A G
Sbjct: 204 IACGSTYSAALSASGELYTWGRGNYGRLGHGN--FDDVLTPTLVTTLKGHTVVHVACGSG 261
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 262 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 312
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
G SA + +G VY +G ++ H R P +I L +++ G H L
Sbjct: 313 GGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL 372
Query: 304 TSGGELYTWGSNENG 318
T +Y WG N+ G
Sbjct: 373 TEDQFVYGWGRNDYG 387
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 144/300 (48%), Gaps = 45/300 (15%)
Query: 88 ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
+ VY GLND QLG I + L+P+ I+G K + +S
Sbjct: 2587 QQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQ------- 2639
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG + P + LS K+ A+ G + ++A+T
Sbjct: 2640 ---EGKLYACGEGTNGRLGLGDD--NNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQD 2694
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG S+ P+LI+ L+ +++ A G HSA I
Sbjct: 2695 GKVFSWGEGEDGKLGHGNCISL---------DKPKLIEILKSKRIRDIACGSGHSAAIAS 2745
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYT 311
NG +Y +G ++ + RP L+ L +V CG T LT+ G +Y+
Sbjct: 2746 NGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYS 2805
Query: 312 WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
WG + G LG G D ++P +R+ G V QV CG + + A+++ G++ TWG G
Sbjct: 2806 WGDGDFGKLGRGGSDGCYTPLAVDRLNG----LGVIQVECGAQFSLALTKYGEVWTWGKG 2861
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 139/316 (43%), Gaps = 37/316 (11%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C +K L C + L+ G Y N+ + E PLR+
Sbjct: 94 PFYCDPIAGLGIKQLCCTERSLMILSLNGNAY--------------NMYHGSETQYPLRV 139
Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G + + + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 140 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIESLL 197
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G S A++ G++ +WG G GRLGHG +L TP L+ L
Sbjct: 198 DKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVL---------TPTLVTTL 248
Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
+G V A +G + C+ +G V+ +GD K+ + ++ P ++ KL
Sbjct: 249 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 308
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+V CGG + LT+ GE+YTWG + LG GS + + P+ ++ + + +S G
Sbjct: 309 KVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES-LRDKKIKDLSVGTT 367
Query: 352 HTAAISEGKILTWGWG 367
H A++E + + +GWG
Sbjct: 368 HILALTEDQFV-YGWG 382
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 223 WGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 282
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 283 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSE 342
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G +A+T V W GR +GQ LG
Sbjct: 343 --EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 395
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 396 VVSEPTLCPTL 406
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y+WG N QLG G K +K I +P E LS + A G + V+ GK+ + G
Sbjct: 2591 VYVWGLNDKDQLG-GLKGSK-IKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGE 2648
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++++ P+ I L +K A +G H+ + ++G+V+
Sbjct: 2649 GTNGRLGLGDDNNVC---------EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 2699
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P LI L ++ CG H+ + S GELYTWG E G
Sbjct: 2700 WGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 2759
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG--GSHGTFS 374
LG G P+ VQ + V QV+CG + A ++G + +WG G G G
Sbjct: 2760 LGHGDTITQTRPKLVQALVGQRVV-QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG 2818
Query: 375 EDGHSSGGQLDR 386
DG + +DR
Sbjct: 2819 SDGCYTPLAVDR 2830
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 65/202 (32%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T G V SWG G GRLGHG + S P+LI+ L
Sbjct: 160 LALTQDGCVYSWGNGDGGRLGHGD---------TVSYDEPKLIESL-------------- 196
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+D+N ++F + CG ++ L++ GEL
Sbjct: 197 ---LDKN-------------IVF--------------------IACGSTYSAALSASGEL 220
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGW 366
YTWG G LG G+ D + +P V V V+CG + + + G + +WG
Sbjct: 221 YTWGRGNYGRLGHGNFDDVLTPTLVTT-LKGHTVVHVACGSGDSQTLCVTASGIVFSWGD 279
Query: 367 G--GSHGTFSEDGHSSGGQLDR 386
G G G DG + +D+
Sbjct: 280 GDYGKLGRGGTDGSKTPKIVDK 301
>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 821
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 148/325 (45%), Gaps = 23/325 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G LGLG + P+ + A + G T + G ++ G N GQ
Sbjct: 447 WGRNDFGELGLGVMVYITSPL--QTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQ 504
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P+++ G + +S G H+ A+ DG L+ WG+N NGQLGLG
Sbjct: 505 LGLGDTDDRH-APVQVGG-DSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDD 562
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V S T A G+ ++AV G + +WG R HGQ LG
Sbjct: 563 R--KTPERVGSDSDWATVSAGTGY--TLAVKDDGTLWAWG-----RNSHGQ----LGLGD 609
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ +AG H+ + +G ++ +G + ++ + ++ P
Sbjct: 610 TNNRDAP--VQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPE 667
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ V G HT + + G L+ WG N +G LG+G D H+PE+V G +S
Sbjct: 668 QVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGG---DSD 724
Query: 343 VDQVSCGWKHTAAISEGKILTWGWG 367
V+ GW+HT AI L WGWG
Sbjct: 725 WAAVTAGWQHTLAIKNDGTL-WGWG 748
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 151/328 (46%), Gaps = 31/328 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG E R P + A++ GGA+TL + + G ++A G N FGQ
Sbjct: 147 WGQNNVGQLGLGDTEKRDTPAQVGS--DTDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQ 204
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P ++ G + V +S G HH+ A+ DG L+ WG+N GQLGLG
Sbjct: 205 LGLGDTDDRH-APEQV-GSDSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQLGLGGTTN 262
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P G + A + G S+AV G + SWG G+LG G
Sbjct: 263 RNAPEQV------GSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNVGQLGLG-------- 308
Query: 221 LRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ R E G A +AG LH+ + +G ++ +G ++ + ++
Sbjct: 309 -----DTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNR 363
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + + G ++ + + G L++WG N+ G LG+G D H+PE+V G
Sbjct: 364 DAPVQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDRHAPEQVGGGM 423
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ V+ G HT + ++G + WG
Sbjct: 424 EWAA---VTAGMYHTLGVKADGTLRAWG 448
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 154/363 (42%), Gaps = 51/363 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG ++R PV + + AL G ++L + G +++ G NDFG+
Sbjct: 347 WGGNGFGQLGLGDTDNRDAPVQVGS--DNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGE 404
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P ++ G E ++ G +H+ + DG L WG+N G+LGLG
Sbjct: 405 LGLGDTDDRH-APEQVGG-GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVY 462
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ T E A+ G Q+ AV G + WG SG+LG G ++
Sbjct: 463 ITSPLQTVTEA----DWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQ 518
Query: 223 --STSEYTPRLIKELEGVKVK-------------------------------------IA 243
S++T + + VK
Sbjct: 519 VGGDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATV 578
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
+AG ++ + ++G ++ +G + ++ + N+ P ++ V G HT +
Sbjct: 579 SAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAVSAGSRHTLAV 638
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ G L+ WG N +G LG+G D PE+V S++ VS G HT A+ ++G +
Sbjct: 639 KNDGTLWAWGRNSDGQLGLGDTDNRDVPEQVG---SDTDWAAVSTGSGHTLAVKTDGTLW 695
Query: 363 TWG 365
WG
Sbjct: 696 AWG 698
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 141/308 (45%), Gaps = 32/308 (10%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C+AF LA GG HTL + G ++A G N+ GQLG+ + P ++ G
Sbjct: 120 VECTAF-----PVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDT-PAQV-GSD 172
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ +S G ++ A+ DG L+ WG+N GQLGLG + P +V S A
Sbjct: 173 TDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDR--HAPEQVGSDSDWVAVSA 230
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI---KELEGVK 239
G ++A+ G + +WG G+LG G +T+ P + + GV
Sbjct: 231 --GRHHTLALKADGTLWAWGRNYFGQLGLGG---------TTNRNAPEQVGSHSDWAGV- 278
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
G HS + E+G ++ +G V ++ + RRP + V G H
Sbjct: 279 ----IGGDRHSLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLH 334
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
T + + G L+ WG N G LG+G D +P +V S++ ++ G +++ A+ ++
Sbjct: 335 TLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAPVQVG---SDNDWAALNAGQRYSLAVKND 391
Query: 359 GKILTWGW 366
G + +WGW
Sbjct: 392 GSLWSWGW 399
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 28/298 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG + R P + ++ G +TL + + G ++A G N GQ
Sbjct: 547 WGQNYNGQLGLGDTDDRKTPERVGS--DSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQ 604
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + P++++ + +S G H+ A+ DG L+ WG+NS+GQLGLG
Sbjct: 605 LGLGDTNNRD-APVQVAS-DNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDN 662
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P G T AA+ G ++AV G + +WG G+LG
Sbjct: 663 RDVPEQV------GSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLG---------- 706
Query: 221 LRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L T E R E G AA AG+ H+ I +G ++ +G ++ + +
Sbjct: 707 LGDTDE---RHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGR 763
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + V G YHT + G L WG N G LG + P+ V G
Sbjct: 764 HAPMQVGSDSDWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLGQRTY-RFDQPQEVPG 820
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
++E + AAG +H+ + +G ++ +G V ++ + P+ + V
Sbjct: 119 DVECTAFPVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAAV 178
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
GG +T + G L+ WG N G LG+G D H+PE+V S+S VS G HT
Sbjct: 179 SAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVG---SDSDWVAVSAGRHHT 235
Query: 354 AAI-SEGKILTWG 365
A+ ++G + WG
Sbjct: 236 LALKADGTLWAWG 248
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 161/337 (47%), Gaps = 30/337 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 310 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 369
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 370 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 428
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G + AV T GK+ +WG G RL
Sbjct: 429 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 486
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L A G + + +G ++ G +V
Sbjct: 487 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 536
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L N R P L+ + EVVCG YH VLT GE+YTWG NG LG G I
Sbjct: 537 QLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIA 596
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
+P V+ + V +++CG TAAI + K ++
Sbjct: 597 DRKTPTFVEA-LRDRSVKRIACGSGFTAAICQHKSVS 632
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 35/253 (13%)
Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG + + AA I +P +E + A G + + VT
Sbjct: 243 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 302
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +SI + PRL++ L V+ A G H+ I
Sbjct: 303 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 353
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S P V CG +HT ++TS G
Sbjct: 354 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 412
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+LYT+G G LG G+ + + P+ V+ + VSCG HTAA+ E
Sbjct: 413 KLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIMAQSNTS 471
Query: 359 -GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 472 SGKLFTWGDGDKY 484
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +S+ +T P+ ++ + V A G H+A + V+ +G+ ++
Sbjct: 259 QGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 318
Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
G +P L+ L E + CG +HTC +T+ G+LYTWG ++ G LG GS +
Sbjct: 319 GHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGS-N 377
Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
V H P+RV GP V VSCG HTA I S GK+ T+G GTF GH
Sbjct: 378 VSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFG----DGTFGVLGH 427
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 28/289 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
GN YG LG G +S P A S+K A G G H L LTE G VY+ G ND+ +
Sbjct: 52 GNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +++ L P + + K VV I+ G HHS A+T GE+Y WG N +GQ+G G
Sbjct: 112 LG-NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTI 170
Query: 161 AAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V PIP + L+G + G SVAVT G+V SWG G G+LG G
Sbjct: 171 LSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLG------- 223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TS+ P+ + + ++ G++H+ + + G +Y++G + ++ ++
Sbjct: 224 --NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVW 281
Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
P +KL E ++V YH + ++ G ++ WG CLG
Sbjct: 282 IP---TKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ----CLG 323
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 138/291 (47%), Gaps = 18/291 (6%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
TL +T+ VY G N +G LG + ++ P +I L K V + G H A+T
Sbjct: 39 TLLVTKDDMVYGIGNNTYGCLGTGDTQS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+G++Y WG N +LG K+ PT V L F A G S+A+T G++
Sbjct: 98 EGKVYSWGYNDYCELG--NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIY 155
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGR 258
+WG SG++G G + ST + P+L+ L G KV + G S + ++G
Sbjct: 156 AWGHNVSGQVG-------CGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGE 208
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G V ++ P ++ E+VVCG HT L+ G LY WG+N
Sbjct: 209 VYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANS 268
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISEG-KILTWG 365
G LG+ + + P +++ P +D V+ + H + A+SEG +I WG
Sbjct: 269 YGQLGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 43/272 (15%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LEP IS ++ +V + + +T D +Y G N+ G LG G + + P K+E
Sbjct: 18 LEPKFISNVRMAIVY-GKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYP--KKIE 74
Query: 173 CLSGIFTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPR 230
L G K A G +A+T GKV SWG LG+ +ST+E TP
Sbjct: 75 ALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGN----------KSTNEGLTPT 124
Query: 231 LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------------LFQE 274
L+ + K V IA G HS + G +Y +G ++ L
Sbjct: 125 LVPSVLDDKFVVDIACGGH-HSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNV 183
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
G + ++ IS CG + +T GE+Y+WG N G LG+G+ P++V
Sbjct: 184 GLNGKKVVHIS---------CGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKV 234
Query: 335 QGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
F++ +++V CG+ HT A+S EG + WG
Sbjct: 235 -ATFAKIVIEKVVCGYMHTLALSDEGVLYVWG 265
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G++G G++ S +P+ + + ++CG + ++ +T++G VY+ G N
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNG 216
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+ N +EP +++ K V++ + GY H+ A++ +G LY+WG NS GQLGL
Sbjct: 217 VGQLGLG-NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLN 275
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ IP +V + I + S+A++ G ++ WG
Sbjct: 276 TDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG+ S+ P + F K ++ + CG HTL L++ G +Y G N +GQ
Sbjct: 212 WGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQ 271
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
LG++ + + L + + + + +++ YHH S A++ ++MWG+ LG+
Sbjct: 272 LGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ------CLGQS 325
Query: 161 AAKVIPIPTKVECL 174
+P T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E + ++CG H+L + G V+A G GQL
Sbjct: 20 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 79
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WGKNS+GQLGLGK+
Sbjct: 80 GIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFP 139
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 140 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 192
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+ L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 193 PVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQ 252
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 253 LVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 22/298 (7%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA 137
G H+L L G V + G N GQLG + +P RI L+ V +S G HS A
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ G ++ WG S GQLG+G+ IP K++ L+ I Q A G S+A++ G+
Sbjct: 62 VCHKGRVFAWGAASEGQLGIGELKETTF-IPKKIKTLADIKIIQVACGHYHSLALSEDGQ 120
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS + +G
Sbjct: 121 VFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 172
Query: 258 RVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
+ +G ++ GN+A +P L+ L V CG HT VLT G+++T
Sbjct: 173 TSFGWGSNNAGQLALS-GNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFT 231
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
+G N G LG S P+ V+ E V Q+ CG HT A + G+++++G G
Sbjct: 232 FGDNSYGQLGHDSTAEKRGPQLVER--IEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 287
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 22/268 (8%)
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G HHS + DG + G NS GQ LG+K P ++ L + + G E S
Sbjct: 2 SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+AV G+V +WGA G+LG G+ L+ T+ + P+ IK L +K+ A G H
Sbjct: 60 LAVCHKGRVFAWGAASEGQLGIGE-------LKETT-FIPKKIKTLADIKIIQVACGHYH 111
Query: 250 SACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
S + E+G+V+ +G + ++ F +R + +P + +V GG H+ L+
Sbjct: 112 SLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAHSFALSL 170
Query: 306 GGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 362
G + WGSN G L + + V + G V +SCG++HTA ++ +GK+
Sbjct: 171 SGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVF 230
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
T+G S+G GH S + QL
Sbjct: 231 TFG-DNSYGQL---GHDSTAEKRGPQLV 254
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G+LG+G L E+ + P + +ACG H+L L+E G V++
Sbjct: 67 RVFA--WGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSW 124
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 125 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 184
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L A V P V L + + G+E + +T GKV ++G G+LGH
Sbjct: 185 LALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ +EG+ +I + A + G+V FG
Sbjct: 245 TAEKRG---------PQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G + G N+ G
Sbjct: 124 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 183
Query: 102 QLGISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ + LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 184 QLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHD 243
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG-GSGRLGHGQESSI 217
A K P VE + G+ ++ + V G+V+S+G G G R E+
Sbjct: 244 STAEK--RGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPGCTRSSPHPEA-- 299
Query: 218 LGFLRSTSEYTPRL-IKELEGVKVKIAAAG 246
L +S+ + + +LE V+VK AG
Sbjct: 300 ---LAESSDVSCLISANDLEDVQVKHIFAG 326
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 158/331 (47%), Gaps = 27/331 (8%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + +++ ACGG+HTL LT+ G +Y G ND
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N + P IS L+ +V Q+S G HS A+T G+L+ WG N+ GQLG
Sbjct: 66 GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P ++ ++ Q + G +A+T G++ +WGA G+LG G
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLG------- 177
Query: 220 FLRSTSEYTP--RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T + P L+K L G+ + A G HS + ++G ++ +G ++ + +
Sbjct: 178 ---TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDS 234
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE--- 332
P+ + L + CG + LT G ++T G G LG G+ H E
Sbjct: 235 RCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT----HGNEILP 290
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI--SEGKI 361
R+ S + Q++CG KHT A S GK+
Sbjct: 291 RMVFELMGSKITQIACGRKHTLAFVPSRGKV 321
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 150/304 (49%), Gaps = 21/304 (6%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG +L ++ RP SA E + + ++CG +H+L LT G +++ G N G
Sbjct: 61 GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQIS G+ H A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV P T V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P +K L + V+ + G S + + G V+ G ++ G H
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287
Query: 281 --PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P ++ +L S+ ++ CG HT S G++Y +G G LG+GS ++P+ V+
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVR 347
Query: 336 GPFS 339
GP+S
Sbjct: 348 GPWS 351
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG +G+LGLG + + P +++ +QAA G ++ +T GK+ + G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+++ +G
Sbjct: 63 NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A ++ + P +I + ++ CG H LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G+G+ + + P+ ++CG H+ A+S+ G I WG
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG 220
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 20/305 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
L+ A G H+L L G V++ G N GQLG + +P I L+ V+ +S G
Sbjct: 36 LRQAASGERHSLLLLSDGAVHSCGDNSRGQLG-RRGLQREEQPKPIQALETLRVELVSCG 94
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ IP K++ L+GI Q + G S+A
Sbjct: 95 KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FKEINLIPQKIKTLTGIKIIQVSCGNYHSLA 153
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 154 LSEDGQVFSWGSNSHGQLGLGKELP--------SQASPQRVRSLDGIPLAQVAAGGAHSF 205
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
+ +G + +G ++ F N + +P +S L + CG HT VLT
Sbjct: 206 ALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQN 265
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTW 364
G+++T+G N G LG P+ ++G E V Q+ CG HT A + G+++++
Sbjct: 266 GKVFTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVYTTGQVVSF 323
Query: 365 GWGGS 369
G G S
Sbjct: 324 GRGPS 328
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG L+ +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 59 GDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQL 118
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E +L P +I L +++Q+S G +HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 119 GIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELP 178
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 179 SQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------AFFGSNV 231
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR + L+ + V + G H+A + +NG+V+ FGD + ++ P
Sbjct: 232 PVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQ 291
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + ++ CG YHT + + G++ ++G
Sbjct: 292 LMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + DG ++ G NS GQ LG++ + P ++ L + + +
Sbjct: 35 ELRQAASGERHSLLLLSDGAVHSCGDNSRGQ--LGRRGLQREEQPKPIQALETLRVELVS 92
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I P+ IK L G+K+
Sbjct: 93 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEI--------NLIPQKIKTLTGIKIIQV 144
Query: 244 AAGFLHSACIDENGRVYIFGDRA-----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
+ G HS + E+G+V+ +G + + K L + + R SL +P + +V GG
Sbjct: 145 SCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL-DGIPLA-QVAAGGA 202
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHT 353
H+ L+ G + WGSN G L +V P + P S S V +SCG +HT
Sbjct: 203 HSFALSLSGTSFGWGSNNAGQLAFFGSNV---PVQSYKPRSVSALKTLGVVYISCGHEHT 259
Query: 354 AAISE-GKILTWG 365
A +++ GK+ T+G
Sbjct: 260 AVLTQNGKVFTFG 272
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 16/231 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P + ++CG H+L L+E G V++
Sbjct: 106 RVFA--WGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSW 163
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 164 GSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 223
Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L G P V L + + G E + +T GKV ++G G+LGH
Sbjct: 224 LAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS- 282
Query: 214 ESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
T+E T P+L++ +EG+ +I + A + G+V FG
Sbjct: 283 ---------PTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLG L S+ P + + L +A GGAH+ L+ +G + G N+ G
Sbjct: 163 WGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 222
Query: 102 QLGI--SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL S S +P +S LK VV IS G+ H++ +T +G+++ +G NS GQLG
Sbjct: 223 QLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS 282
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
A K P +E + G+ ++ + V G+V+S+G G S +
Sbjct: 283 PTAEKT--GPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPSCK 330
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+QAA G S+ + G V S G G+LG G R E P+ I+ LE ++
Sbjct: 37 RQAASGERHSLLLLSDGAVHSCGDNSRGQLGRR------GLQR---EEQPKPIQALETLR 87
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
V++ + G HS + GRV+ +G + ++ F+E N P I L + +V
Sbjct: 88 VELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLI--PQKIKTLTGIKIIQVS 145
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG YH+ L+ G++++WGSN +G LG+G + SP+RV+ P+ QV+ G H+
Sbjct: 146 CGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRS-LDGIPLAQVAAGGAHS 204
Query: 354 AAISEGKILTWGWGGSHG 371
A+S ++GWG ++
Sbjct: 205 FALSLSGT-SFGWGSNNA 221
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G +++ AA+G HS + +G V+ GD + ++ + +P I L E V
Sbjct: 33 GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ P++++ + + QVSCG H+
Sbjct: 93 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKT-LTGIKIIQVSCGNYHS 151
Query: 354 AAISE-GKILTWGWGGSHG 371
A+SE G++ +WG SHG
Sbjct: 152 LALSEDGQVFSWG-SNSHG 169
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 154/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG+ GRLG G P + A + + +ACG H+ +T +G ++ G + +
Sbjct: 331 WGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSY 390
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + P R+ G + V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 391 GLLGHGNDISH-WTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHG 449
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + + +P +VE L G+ T + A G + AV GK+ +WG G G
Sbjct: 450 DK--RSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKG 507
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L K A G + + NGRV+ G
Sbjct: 508 RLGHGDKEQKL---------VPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLY 558
Query: 268 DKMLFQEGNHARRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + P L+ +L + EE+ CG YH VLT+ E+YTWG NG LG G
Sbjct: 559 GQLGDVRAD-GKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGD 617
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ ++P V+ E V V+CG TAAI
Sbjct: 618 VMDRNTPTLVEA-LKEKQVKSVACGSGFTAAI 648
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 117/259 (45%), Gaps = 29/259 (11%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G H++ +T GE++ WG S G+LG G + P VE L+ T+ A
Sbjct: 308 DVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVD--VAHPKLVEALATTNTEFVA 365
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLI-KELEGVKV 240
G S AVT G + +WG G G LGHG + S +TP+ + LEG++V
Sbjct: 366 CGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGND---------ISHWTPKRVGGPLEGIRV 416
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
A G H+A + G+++ FGD + + P + L + V CG +
Sbjct: 417 SSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVW 476
Query: 299 HTCVLT-----------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
HT + S G+L+TWG + G LG G + P V + QV+
Sbjct: 477 HTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAA-LVDYNFKQVA 535
Query: 348 CGWKHTAAIS-EGKILTWG 365
CG T A++ G++ T G
Sbjct: 536 CGHTLTVALTINGRVFTMG 554
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 106/245 (43%), Gaps = 34/245 (13%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++++WG++ +G G K + P +E + A G + VT G+V
Sbjct: 275 GDVFLWGES----VGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFC 330
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG GRLGHG + + P+L++ L + A G HS + +G ++
Sbjct: 331 WGDESGGRLGHGVDVDVA---------HPKLVEALATTNTEFVACGEYHSCAVTLSGDLF 381
Query: 261 IFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGS 314
+GD L GN P + P V CG +HT ++TS G+L+T+G
Sbjct: 382 TWGDGTHSYGLLGHGNDISHWTPKRVGG-PLEGIRVSSVACGVWHTALVTSAGQLFTFGD 440
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------GKIL 362
G LG G + P+ V+ V +V+CG HTAA+ E GK+
Sbjct: 441 GTFGVLGHGDKRSVALPKEVESLKGLKTV-RVACGVWHTAAVVEVMVGYSNAGGSSGKLF 499
Query: 363 TWGWG 367
TWG G
Sbjct: 500 TWGDG 504
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 34/347 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV A LA G H L ++ G V++ G N GQ
Sbjct: 726 WGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ 783
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG E P ++G + + ++ G S A++ DG ++ WG N +GQLG G A
Sbjct: 784 LGY-EGSATQTSPRWLTG-PECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V L+ + A G + ++AV G V +WGA GSG+LG G
Sbjct: 842 RT--APARVPGLAHVVAIAA--GSDHALAVRADGTVWAWGANGSGQLGDGT--------- 888
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+TS P +KEL V V A G HS + +G V+ +G ++ P
Sbjct: 889 TTSRAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPV 946
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L + + G H+ L GG ++ WG+N +G LG G+ P +V G S
Sbjct: 947 FVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSG---LSG 1003
Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQL 389
V + G + A++ GK+ +W G++S GQL G L
Sbjct: 1004 VQGLVAGASFSLALTPGKVWSW------------GNNSAGQLGDGTL 1038
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 146/296 (49%), Gaps = 26/296 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++A+A G +L L+ G V+A G N GQLG + P R+ GL VV I+ G
Sbjct: 804 IEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGA-VTARTAPARVPGLA-HVVAIAAGS 861
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK--VECLSGIFTKQAALGFEQSV 190
H+ A+ DG ++ WG N +GQLG G ++ +P+ K V+ ++ A G S+
Sbjct: 862 DHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVA------VAGGSGHSL 915
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
AV G V +WGA GSG+LG G +TS P + L GV+ A+G HS
Sbjct: 916 AVRADGTVWAWGANGSGQLGDGT---------TTSRTLPVFVSTLSGVQA--IASGAQHS 964
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+ E G V+ +G ++ RP +S L + +V G + LT G+++
Sbjct: 965 LALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGLVAGASFSLALTP-GKVW 1023
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+WG+N G LG G+++ P GP S V +S G +HT + S+ L+WG
Sbjct: 1024 SWGNNSAGQLGDGTLNSRSQPG--AGPTLSSFV-ALSAGAQHTVVLRSDDSFLSWG 1076
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 157/329 (47%), Gaps = 23/329 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G+ R P V + +A G H+L L +G V+A G N +G
Sbjct: 524 WGDNSYGQLGAGATPRGPRAPAVVPGLAV--ITHVAAGLFHSLALDSSGQVWAWGDNVYG 581
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P R+SGL + I G +S A+ DG ++ WG+NSNGQLG G
Sbjct: 582 QLGDGSTTSRNV-PGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTT 640
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A+ P+P +V L + G +VA+ G + +WG SG+LG+G
Sbjct: 641 AR--PVPARV-SLPATLVALSTRG-SHTVALDTTGMLWAWGRNVSGQLGNGTL------- 689
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
SE TPR + +V+ A+G + + +G V+ +GD ++ ++ + + P
Sbjct: 690 --VSESTPRRVPSF--ARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVP 745
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
P + + G H ++S G ++++GSN G LG SP + GP
Sbjct: 746 VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSPRWLTGPEC-- 803
Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
++ V+ G + A+S +G + WG GS
Sbjct: 804 -IEAVAAGALFSLALSCDGGVWAWGDNGS 831
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 169/371 (45%), Gaps = 62/371 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET---GCVYATGLND 99
WG G+LG G+L+SR PV S + ALA GG+H++ + T G V+A G N
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLGGKVWAWGDNT 277
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+GQLG ++ SL PL + GL +VV +++G HS A+ D ++ WG N+ Q
Sbjct: 278 YGQLGNGGDV-SSLLPLEVPGLT-QVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTG 335
Query: 160 KAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--S 216
+ + +P+ +SG+ QA A G S+ G L WGA GSG+LG+G S +
Sbjct: 336 TSVQRVPV-----RVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRA 390
Query: 217 ILG------------------FLRST---------------------SEYTP-RLIKELE 236
+ G FLR S P RL L
Sbjct: 391 LPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLT 450
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
V+ A++ HS + +G V+ +GD A ++ G P+ + + + E+ G
Sbjct: 451 SVRALSASS--YHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPGVAGATEIAAG 508
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAA 355
YH+ L S G ++TWG N G LG G+ +P V G + + V+ G H+ A
Sbjct: 509 TYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPG---LAVITHVAAGLFHSLA 565
Query: 356 I-SEGKILTWG 365
+ S G++ WG
Sbjct: 566 LDSSGQVWAWG 576
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 20/272 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G++ +R P + A+A G H L + G V+A G N GQ
Sbjct: 826 WGDNGSGQLGDGAVTARTAPARVPGLAH--VVAIAAGSDHALAVRADGTVWAWGANGSGQ 883
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ L +VV ++ G HS A+ DG ++ WG N +GQLG G +
Sbjct: 884 LGDGTTTSRAV-PMQVKELV-DVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTS 941
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ V LSG+ + A G + S+A+ GG V +WGA GSG+LG G
Sbjct: 942 RTLPV--FVSTLSGV--QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGT--------- 988
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+TS P + L GV+ +A A F + G+V+ +G+ + ++ N +P
Sbjct: 989 TTSRTRPVQVSGLSGVQGLVAGASF---SLALTPGKVWSWGNNSAGQLGDGTLNSRSQPG 1045
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
L + G HT VL S +WG+
Sbjct: 1046 AGPTLSSFVALSAGAQHTVVLRSDDSFLSWGT 1077
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 23/328 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV +L AL+ G+HT+ L TG ++A G N GQ
Sbjct: 626 WGENSNGQLGDGTTTAR--PVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRNVSGQ 683
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P R+ + V ++G + A+ DG ++ WG NS GQLG G +A
Sbjct: 684 LGNGTLVSES-TPRRVPSFAR-VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSA 741
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P V+ + T A G + +AV+ G V S+G+ G+ LG+
Sbjct: 742 SPVP----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ---------LGYEG 788
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S ++ +PR + E ++ AAG L S + +G V+ +GD ++ P+
Sbjct: 789 SATQTSPRWLTGPE--CIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPA 846
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + + G H + + G ++ WG+N +G LG G+ P +V+
Sbjct: 847 RVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVD--- 903
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
V V+ G H+ A+ ++G + WG GS
Sbjct: 904 VVAVAGGSGHSLAVRADGTVWAWGANGS 931
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 141/297 (47%), Gaps = 28/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + R V + A+A G H+L L G V+A G N GQ
Sbjct: 122 WGTNTDGQLGDGVSQ---RSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAWGNNTTGQ 177
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P +++GL EVV I+ G HS A+ DG ++ WG N +GQLG G +
Sbjct: 178 LGDGSSTSRS-TPAKVAGLT-EVVAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS 235
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVA---VTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +V L+GI A G SVA T GGKV +WG G+LG+G + S L
Sbjct: 236 RSTPV--RVSGLTGIVAL--AGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGDVSSL- 290
Query: 220 FLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L E+ G+ +A A+G HS + + V+ +GD A Q G
Sbjct: 291 -----------LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNA-QAQTAQTGTSV 338
Query: 279 RR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+R P +S + ++ + CG + V WG+N +G LG GS V P RV
Sbjct: 339 QRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRV 395
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 138/299 (46%), Gaps = 34/299 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA G H+L++T G V+A G N GQLG + +S P ++ GL V ++ G HS
Sbjct: 53 LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHS-TPTQVVGLTG-VTAVAAGNTHS 110
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ +G ++ WG N++GQLG G V P +V L+G+ A G S+A+
Sbjct: 111 MALREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGV--TAIAAGNLHSLALI-N 164
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG +G+LG G STS TP + L +V AAG HS +
Sbjct: 165 GAVWAWGNNTTGQLGDGS---------STSRSTPAKVAGL--TEVVAIAAGDFHSLALKR 213
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS---GGELYTW 312
+G V+ +G ++ + P +S L + GG H+ +S GG+++ W
Sbjct: 214 DGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAW 273
Query: 313 GSNENGCLGIG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
G N G LG G S+ L P Q V ++ G H+ A+ G W WG
Sbjct: 274 GDNTYGQLGNGGDVSSLLPLEVPGLTQ-------VVALASGTSHSLAL-RGDDSVWAWG 324
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+++ G +HS +T G ++ WG N+ GQLG G PT+V L+G+ A G
Sbjct: 52 RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQH--STPTQVVGLTGV--TAVAAGN 107
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G V +WG G+LG G + P + L GV AAG
Sbjct: 108 THSMALREEGTVWTWGTNTDGQLGDGV----------SQRSVPAQVAGLTGVTA--IAAG 155
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
LHS + NG V+ +G+ ++ P+ ++ L + G +H+ L
Sbjct: 156 NLHSLAL-INGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRD 214
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE----GKIL 362
G ++ WG N +G LG G++D +P RV G + + ++ G H+ A S GK+
Sbjct: 215 GTVWAWGGNYSGQLGDGTLDSRSTPVRVSG---LTGIVALAGGGSHSVAASSTTLGGKVW 271
Query: 363 TWG 365
WG
Sbjct: 272 AWG 274
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
RR IS + G H+ +T G ++ WG+N G LG GS +P +V G
Sbjct: 39 RRAPAISVQGRPYRLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVG-- 96
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ V V+ G H+ A+ EG + TWG
Sbjct: 97 -LTGVTAVAAGNTHSMALREEGTVWTWG 123
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 21/231 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G ++ P A EK A GG H+L LTE VYA G N FGQ
Sbjct: 76 WGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + YS P +S L++ V I+ GY HS A+ +LY WG+N GQLGLG
Sbjct: 136 LGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYR 195
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----GGG-----KVLSWGAGGSGRLGHG 212
+ P+P + +Q + G++ ++A G G KV +WG G G+LGH
Sbjct: 196 SS--PVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHD 253
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ S P++++ L ++ AAG SA IDE ++Y +G
Sbjct: 254 E---------LYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 25/256 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAAL 184
V + G H+ A+T +G +Y WG +NG LG G ++++P + + + A
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPSITTIAC 59
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++AV G + +WG G+LGHG + PR ++ LE AA
Sbjct: 60 GEFHTLAVGQDGTLWTWGRNQYGQLGHGD---------CKTHKLPRRVEALEKKICIKAA 110
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
AG HS + E +VY FG ++ L + ++ P ++S+L S + CG H+
Sbjct: 111 AGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSM 170
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-ISE-- 358
L +LY+WG N+ G LG+G PE + F +S V Q+SCG+ H A +SE
Sbjct: 171 ALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLT-MFKKSQVQQISCGYDHNIAFVSEYA 229
Query: 359 -------GKILTWGWG 367
K+ TWG G
Sbjct: 230 GPGVPPLEKVYTWGRG 245
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 139/307 (45%), Gaps = 33/307 (10%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGY 132
ACG HT+ LTE G VY+ G + G LG S+ + +L+ I + + I+ G
Sbjct: 4 ACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMP-SITTIACGE 61
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+ DG L+ WG+N GQLG G K +P +VE L +AA G + S+ +
Sbjct: 62 FHTLAVGQDGTLWTWGRNQYGQLGHGD--CKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHS 250
T KV ++G+ G+LG L S +Y+ P ++ L V G+ HS
Sbjct: 120 TEANKVYAFGSNVFGQLG----------LESKVKYSAAPDIVSRLRRSGVCHITCGYSHS 169
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSG-- 306
+ ++ ++Y +G ++ + P ++ S +++ CG H S
Sbjct: 170 MALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYA 229
Query: 307 -------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
++YTWG E G LG + P+ VQ + + V+ G +AAI E
Sbjct: 230 GPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARG-IRAVAAGGFSSAAIDEA 288
Query: 360 KIL-TWG 365
K L TWG
Sbjct: 289 KQLYTWG 295
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG L SR P V ++A+A GG + + E +Y G + GQ
Sbjct: 242 WGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQ 301
Query: 103 LGISENI 109
LG ++I
Sbjct: 302 LGHGDDI 308
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 124 bits (310), Expect = 9e-26, Method: Composition-based stats.
Identities = 84/276 (30%), Positives = 128/276 (46%), Gaps = 44/276 (15%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLN---------------------DFGQLGISEN 108
K +K ++CG HTL +T+ G ++ G+ GQLG +EN
Sbjct: 267 KDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLG-NEN 325
Query: 109 IGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
EP + K++ +Q++ G HS A+T +G+++ WGKN+ GQLG G + ++ P
Sbjct: 326 FVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPT 385
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+E + G + S ++ ++ +WG G RLGHG +T E
Sbjct: 386 MIIIE----VMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGV---------TTDEL 432
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
P+ + LE V V + G H+ I G VY +GD K+ QE N + L
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKS--------L 484
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V GG H+ LT G LY+WGS++ G LGIG
Sbjct: 485 HLPTRVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG + + + P + K +ACG +H++ LT+ G ++ G N GQLG
Sbjct: 319 GQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLG---- 374
Query: 109 IGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G+ + L+ + + EV+ I +G HS+ I+ + ELY WG +LG G ++
Sbjct: 375 QGHRNDQLKPTMIIIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDEL-- 432
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV L ++ + G ++A+T G V +WG G SG+LG QE+ + S
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN-------NKSL 484
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P + +AG LHS + + G +Y +G
Sbjct: 485 HLPTRV-----------SAGGLHSMALTDQGILYSWG 510
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG Y RLG G P E + ++CG HTL +T G VYA G G+
Sbjct: 415 WGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGK 474
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--KK 160
LG+ EN P R+S G HS A+T G LY WG + G LG+G +
Sbjct: 475 LGVQENNKSLHLPTRVSA----------GGLHSMALTDQGILYSWGSSKGGVLGIGFQRD 524
Query: 161 AAKVIPIPTKVECLSGIFTK 180
+P K+ ++ I +K
Sbjct: 525 NKDCYSLPQKIRTVAKIQSK 544
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + +P + + ++ G H+ F+++ +Y G + +
Sbjct: 365 WGKNTRGQLGQGHRNDQLKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFR 422
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG L P ++ L+ V +S G H+ AIT +G +Y WG +G+LG+ ++
Sbjct: 423 LGHGVTTD-ELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN 480
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K + +PT+V + G S+A+T G + SWG+ G LG +GF
Sbjct: 481 NKSLHLPTRV-----------SAGGLHSMALTDQGILYSWGSSKGGVLG-------IGFQ 522
Query: 222 RSTSE-YT-PRLIKELEGVKVK 241
R + Y+ P+ I+ + ++ K
Sbjct: 523 RDNKDCYSLPQKIRTVAKIQSK 544
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
P I K +++ +S Y H+ AI+ G Y WG N QLGLG K IP K++
Sbjct: 781 PFLIPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLG-YMCKYNHIPQKIQ-- 837
Query: 175 SGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ TK+ + S +T G++ ++G SG LGH +++ + SE P++
Sbjct: 838 GALETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYV-----VSE--PKM 890
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
I ++ + + +A+ A ++ ++Y +G+ ++ Q N+
Sbjct: 891 INDIPPM-IFLASGPQGMMAITEQKRQIYAWGNNLYGQLGIQITNN 935
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQI 128
K+ + ++C H + ++ G Y+ G N + QLG+ Y+ P +I G L+ + + +
Sbjct: 788 KNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIM 847
Query: 129 STGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
ST SA+ D GE++ +G + +G LG +K V+ P + + + A G +
Sbjct: 848 STCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIF--LASGPQ 905
Query: 188 QSVAVTGGGK-VLSWGAGGSGRLG 210
+A+T + + +WG G+LG
Sbjct: 906 GMMAITEQKRQIYAWGNNLYGQLG 929
Score = 45.4 bits (106), Expect = 0.046, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ Y +LGLG + ++ + + A E + C + LT+ G ++ G +D
Sbjct: 813 WGSNKYYQLGLGYM-CKYNHIPQKIQGALETKRIIMSTCSDRFSALLTDKGEIWTFGTSD 871
Query: 100 FGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
G LG E Y + EP I+ + ++ +++G AIT ++Y WG N GQLG+
Sbjct: 872 SGVLGHDEKNYYVVSEPKMINDIPP-MIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGI 930
Score = 40.4 bits (93), Expect = 1.4, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ ++A++ G SWG+ +LG LG++ + ++ LE ++ ++
Sbjct: 798 YTHAIAISHKGVAYSWGSNKYYQLG-------LGYMCKYNHIPQKIQGALETKRIIMSTC 850
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYHTCVL 303
SA + + G ++ FG + E N+ P +I+ +P + G +
Sbjct: 851 SDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIFLASGPQGMMAI 910
Query: 304 TSGG-ELYTWGSNENGCLGI 322
T ++Y WG+N G LGI
Sbjct: 911 TEQKRQIYAWGNNLYGQLGI 930
Score = 40.4 bits (93), Expect = 1.7, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSES 341
+PY + + C H ++ G Y+WGSN+ LG+G + H P+++QG
Sbjct: 784 IPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETK 843
Query: 342 PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED 376
+ +C + +A +++ G+I T+G S G D
Sbjct: 844 RIIMSTCSDRFSALLTDKGEIWTFGTSDS-GVLGHD 878
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 149/340 (43%), Gaps = 47/340 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G +F
Sbjct: 336 WGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 395
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 396 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 454
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
K + P +VE L G T +A G + AV GK+ +WG G
Sbjct: 455 D--TKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDK 512
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 513 GRLGHGDKEAKL---------VPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGS-- 561
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 562 --PVYGQLGN----PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 615
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D +SP V+ + V ++CG TA I
Sbjct: 616 NGRLGHGDTDDRNSPTLVEA-LKDKQVKSIACGTNFTATI 654
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 157/320 (49%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G +++ G G+L G+ ++ L P I L ++ ++
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNTNIELVA 370
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGIHVSSISCGP 428
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G + I+A G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGVLGHGDTKSV---------SKPREVESLKGHRTVISACG 479
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ + P+ ++ L P
Sbjct: 480 VWHTAAVVEIMVGNPSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAALVDPNF 537
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
V CG T LT+ G +YT GS G LG D P RV+G ++S V++++CG
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPTRVEGKLAKSFVEEIACGA 596
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 597 YHVAVLTSRTEVYTWGKGAN 616
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + VT G++ SWG GRLGHG +S +L
Sbjct: 302 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 353
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 354 -HPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 412
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + CG +HT V+TS G+L+T+G G LG G + P V+
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHR 472
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
V +CG HTAA+ E GK+ TWG G
Sbjct: 473 TVIS-ACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDG 510
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G ++ +G+ + ++ + P LI L
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG + G LG G+ +V H P+RV GP V
Sbjct: 363 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 421
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 422 SSISCGPWHTAVVTSSGQLFTFG----DGTFGVLGH 453
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
V++ G + GQLGI + EP + L+ + ++ G +H++A+ +G+LY WG
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQD-EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGG 59
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G ++ P +VE L G+ A G + VT G + +WG +G
Sbjct: 60 GMYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVD 268
GHG +YTP+L++ L G KV +++A GF H+AC+ ++ + +G+
Sbjct: 118 GHGDTEG--------HQYTPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFG 168
Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + P LI L Y +V CGG+H+ V+T G++YT+G E+G LG
Sbjct: 169 RLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKV 228
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 360
P V+ V Q++CGW H+ A+ SEG+
Sbjct: 229 NKLKPTLVE-ALDGVVVKQITCGWSHSVALTSEGE 262
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+ G+LG+G + P A + + CG HT + G +Y G +G
Sbjct: 4 WGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYG 63
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG G+S P R+ L +V I+ G H++ +T G LY WG NG G G
Sbjct: 64 KLGHGNESGHS-TPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDT 122
Query: 161 AAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P +E L+G Q +A GF + +T + +WG G GRLG+G E +
Sbjct: 123 EGHQY-TPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFGRLGNGTERNC-- 178
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++PRLI+ L G A G HSA I +G++Y FG ++ + +
Sbjct: 179 -------HSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL 231
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+P+L+ L +++ CG H+ LTS GE +
Sbjct: 232 KPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 117/237 (49%), Gaps = 22/237 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWG 202
++ WG+ +GQLG+G + + PT V+ L G+ G + AV G + +WG
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQ--DEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G G+LGHG ES TPR ++ L G+ + A G H+A + G +Y +
Sbjct: 59 GGMYGKLGHGNESG---------HSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTW 109
Query: 263 GDR--AVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNEN 317
GD+ V EG H P L+ +L + V CG +HT LT E + WG +
Sbjct: 110 GDKENGVAGHGDTEG-HQYTPKLLERLNGKKVVQLSACG-FHTACLTDDHETFAWGEGKF 167
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
G LG G+ HSP ++ + P QV+CG H+A I+ +GK+ T+G GG HG
Sbjct: 168 GRLGNGTERNCHSPRLIESLIGKYPC-QVACGGFHSAVITRDGKMYTFG-GGEHGQL 222
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G+ P A S+ +ACG HT +T GC+Y G + G
Sbjct: 57 WGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGV 116
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + G+ P + L K+VVQ+S H++ +T D E + WG+ G+LG G +
Sbjct: 117 AGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTE- 175
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +E L G + Q A G S +T GK+ ++G G G+LGH + + L
Sbjct: 176 -RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL--- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
P L++ L+GV VK G+ HS + G ++
Sbjct: 232 ------KPTLVEALDGVVVKQITCGWSHSVALTSEGEYHL 265
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
V CG YHT + S G+LYTWG G LG G+ +P RV+ S VD ++CG +
Sbjct: 37 HVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVD-IACGSR 95
Query: 352 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
HTA + S+G + TWG E+G + G + Q TP
Sbjct: 96 HTAVVTSKGCLYTWG-------DKENGVAGHGDTEGHQYTP 129
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 29/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+L +R PV + +A G H+L L G V+A G ND GQ
Sbjct: 118 WGRNDDGQLGDGTLSTRGDPVQVQGLS--GVTTVALGATHSLALCYDGSVWAWGANDHGQ 175
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +I P ++GL+ EVV ++ G +HS A+ DG ++ WG+N +GQLG G
Sbjct: 176 LGDGTSIARR-TPQMVAGLQ-EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVT 233
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+P ++ LSGI A G S+A+ G V +WG+ SG+LG G
Sbjct: 234 RRVPVP--IQGLSGIVA--VASGTSHSLALRYDGNVWAWGSNYSGQLGDGS--------- 280
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
S S +P + EL G+ V + G +S + +G V+ +G ++ +G R
Sbjct: 281 SLSRSSPVQVTELSGI-VSV-EGGPDYSMAVRYDGTVWTWGINTYGQL--GDGTTIARSV 336
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P S L V G H + + ++ WG N NG G S V SP +
Sbjct: 337 PVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTIL----- 391
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
+ V ++ H+ A+ S+G + WG
Sbjct: 392 NEVVTMAATNDHSLAVRSDGGLWAWG 417
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 27/324 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS SR PV + E + ++ G +++ + G V+ G+N +GQ
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVT--ELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQ 325
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S+ P++ SGL VV ++ G H+ A+ + ++ WG N NGQ G ++
Sbjct: 326 LGDGTTIARSV-PVQTSGLSG-VVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSV 383
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P E ++ T + S+AV G + +WGA G+LG G
Sbjct: 384 YFSPRTILNEVVTMAATN------DHSLAVRSDGGLWAWGANNEGQLGDGT--------- 428
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + + P E+ G V + AAG HS + ++G ++ +G V ++ G+ P
Sbjct: 429 TKNRWAP---AEVLGNVVSV-AAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM 484
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ + V G ++ L L+ WG N G LG G+ H P RVQG S
Sbjct: 485 QVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQG---LSG 541
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
+ ++ G H A+ S G + WG
Sbjct: 542 IVAIATGNGHMLAVRSNGTVWAWG 565
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 29/339 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ ++RW P A ++ ++A G H+L + + G ++A G N GQ
Sbjct: 416 WGANNEGQLGDGTTKNRWAP----AEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQ 471
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ G+ + ++ G +S A+ D L+ WG+NS GQLG G
Sbjct: 472 LGDGTGSSRTI-PMQVPGISG-IASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVN 529
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +PT+V+ LSGI A G +AV G V +WG SG+LG G
Sbjct: 530 R--HVPTRVQGLSGIVA--IATGNGHMLAVRSNGTVWAWGDNSSGQLGDGT--------- 576
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + TP ++ L + AAG HS + +G ++ +G ++ G P+
Sbjct: 577 TINRATPVQVQVLS--GIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPT 634
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFS 339
+ + + V +H+ + + G L+ WG+N G LG + +P +V G
Sbjct: 635 QVQGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTPSKVTTLTGVTE 694
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 377
S G+ H+ A+ S+G ++ WG H T+ + G
Sbjct: 695 AVGTFGYSIGFGHSLALRSDGYLVGWG----HNTYGQLG 729
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 31/304 (10%)
Query: 68 FEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK 123
F S +A +A ++L + G V+ G +S N Y + P ++ GL
Sbjct: 41 FTLQSAQARDRIAASSMNSLAIRSDGTVWTVGTRY-----VSANGWYRQDWPGQLPGLSG 95
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I +G S A+ DG ++ WG+N +GQLG G + + P+ +V+ LSG+ T A
Sbjct: 96 -MVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPV--QVQGLSGVTT--VA 150
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG S+A+ G V +WGA G+LG G S + TP+++ L+ +V
Sbjct: 151 LGATHSLALCYDGSVWAWGANDHGQLGDGT---------SIARRTPQMVAGLQ--EVVAV 199
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCV 302
AAG HS + +G V+ +G+ D L RR P I L V G H+
Sbjct: 200 AAGANHSLAVLSDGTVWAWGEN-YDGQLGDGTTVTRRVPVPIQGLSGIVAVASGTSHSLA 258
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
L G ++ WGSN +G LG GS SP +V S + V G ++ A+ +G +
Sbjct: 259 LRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQVT---ELSGIVSVEGGPDYSMAVRYDGTV 315
Query: 362 LTWG 365
TWG
Sbjct: 316 WTWG 319
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ +R PV S + A+A G H L + ++A G N GQ
Sbjct: 318 WGINTYGQLGDGTTIARSVPVQTSGLS--GVVAVAAGRTHALAMRANNSIWAWGGNVNGQ 375
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G E+ P I EVV ++ HS A+ DG L+ WG N+ GQLG G
Sbjct: 376 RG-DESRSVYFSPRTI---LNEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKN 431
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P E L + + A G S+AV G + +WG+ G+LG G SS
Sbjct: 432 RWAP----AEVLGNVVS--VAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSS------ 479
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
P + + G+ AAG +S + + ++ +G+ + ++ +G R
Sbjct: 480 ---RTIPMQVPGISGIAS--VAAGSDYSVALRYDRTLWAWGENSYGQL--GDGTTVNRHV 532
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P+ + L + G H + S G ++ WG N +G LG G+ +P +VQ
Sbjct: 533 PTRVQGLSGIVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQ 587
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 139/304 (45%), Gaps = 35/304 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ SR P+ + ++A G +++ L ++A G N +GQ
Sbjct: 464 WGSNTVGQLGDGTGSSRTIPMQVPGIS--GIASVAAGSDYSVALRYDRTLWAWGENSYGQ 521
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P R+ GL +V I+TG H A+ +G ++ WG NS+GQLG G
Sbjct: 522 LGDGTTVNRHV-PTRVQGLSG-IVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTIN 579
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ LS A G S+AV G + +WG + +LG G
Sbjct: 580 RATPV--QVQVLS--GIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTG-------- 627
Query: 223 STSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
PRL+ +++G+ +A +A HS + +G ++ +G ++ + N
Sbjct: 628 -----IPRLVPTQVQGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPT 682
Query: 281 PSLISKLP-YSEEVVCGGY-----HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
PS ++ L +E V GY H+ L S G L WG N G LG G PE +
Sbjct: 683 PSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTG------VPENI 736
Query: 335 QGPF 338
P
Sbjct: 737 PVPV 740
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 173/362 (47%), Gaps = 28/362 (7%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYM G NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
H+ + EN VY FG ++ +F+ +R P ++ + CG H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
T ++T G LYT+G +G LG+G + + + P F + V V+CG H +++
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
Query: 359 GK 360
+
Sbjct: 368 PR 369
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
++CG HT +TE G ++ G N++GQLG+ + +P + L+ E V+++ G H
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALRSERVKLTACGRTH 99
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
+ T G LY G N+ GQLGLG + L F KQ A G S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDRT------SFHLVEFFNKQGPIKMLAAGSNTS 153
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ G G++G G+ES+ L TP+ + G +V + G+ H
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202
Query: 250 SACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + +G +Y FG++ K+ L E NH + P ++ +P +V CGG HT LT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
E+Y++G + G LG G+ RV F + V +CG HTA I++ +L
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 GDGRHG 326
>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Saccoglossus kowalevskii]
Length = 1049
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 35/363 (9%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ + LQR + WG YG+LGLG + + +P + + GG HTL LT+ G
Sbjct: 19 VGTCLQRGMFS-WGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTDCG 77
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y+ G N GQLG+ S+ RI L V++++ G+ AIT G+LY WG N
Sbjct: 78 AIYSCGWNSKGQLGLGHTDNLSVFK-RIDHL-PPVIKVTCGWDFCLAITEVGDLYAWGCN 135
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG+ + IPTK++ S T AA G S+AVT GK+ SWG+ G+LG
Sbjct: 136 VFGQLGI-PEIDSFTAIPTKIQIFSRNVTSIAA-GLRHSLAVTNDGKLWSWGSARKGQLG 193
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH--SACIDENGRVYIFGDRAVD 268
+ Q + L + P+ + +LE + + + +AC G +Y++G +
Sbjct: 194 NDQSKTGYQLL----QRVPKQVHKLENISSVSSGSYHSTALTAC----GNMYLWGSNKHN 245
Query: 269 KM------LFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWG 313
++ + Q G ++ L + E V G H +T ++ WG
Sbjct: 246 QLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWG 305
Query: 314 SNENGCLGIGSIDVLHSPERVQGP---FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
N+ LGI + + V P + Q++CG +H A+S + K+L WGW
Sbjct: 306 RNDYSQLGISLTGNNCAKKDVTKPKELVILKDIKQIACGSEHNLALSDDNKVLAWGW-NE 364
Query: 370 HGT 372
HG+
Sbjct: 365 HGS 367
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 25/304 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEK----HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G+LGLG ++ S F++ + + CG L +TE G +YA G N FGQLG
Sbjct: 88 GQLGLGHTDN------LSVFKRIDHLPPVIKVTCGWDFCLAITEVGDLYAWGCNVFGQLG 141
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAA 162
I E ++ P +I + V I+ G HS A+T DG+L+ WG GQLG K
Sbjct: 142 IPEIDSFTAIPTKIQIFSRNVTSIAAGLRHSLAVTNDGKLWSWGSARKGQLGNDQSKTGY 201
Query: 163 KVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++ +P +V L I + + S A+T G + WG+ +L + + +
Sbjct: 202 QLLQRVPKQVHKLENISSVSSGS--YHSTALTACGNMYLWGSNKHNQLTNSVQGVVQSGG 259
Query: 222 RSTSEYTP---RLIKELEGVKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN 276
S + P +L EL G + +A +G+ H I + V+ +G ++ + GN
Sbjct: 260 SSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGN 319
Query: 277 H-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ +P + L +++ CG H L+ ++ WG NE+G G G + + +P
Sbjct: 320 NCAKKDVTKPKELVILKDIKQIACGSEHNLALSDDNKVLAWGWNEHGSCGNGKEENVLTP 379
Query: 332 ERVQ 335
+ +
Sbjct: 380 QVID 383
>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 390
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 150/330 (45%), Gaps = 27/330 (8%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLN 98
+L G G GRLG G P + + K +KA + CG H++ ++ G VY G
Sbjct: 69 SLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRG 128
Query: 99 DFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G LG NI L ++ LK V Q+ +HS +T DG++Y +G +G+LG
Sbjct: 129 YKGFLGHKNQNNIRSFLLVDALASLK--VTQVCAARNHSLVVTSDGQVYSFGFPKHGRLG 186
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G A + +P T +E L G Q + +T G+V WG+G G+LG G S
Sbjct: 187 HGDDAYRRLP--TMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNES 244
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ P L++ LEG +K G+ +A I+ G ++ +G ++ +
Sbjct: 245 ---------HFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEE 295
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ PSL++ L + CG H ++ LYTWG N G LG G H P V
Sbjct: 296 NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVV 355
Query: 335 Q----GPFSESP----VDQVSCGWKHTAAI 356
P ++P V +VSCG HTA++
Sbjct: 356 ATLLLAPSEDAPPRGRVAKVSCGANHTASL 385
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ + G S G+LG G + + PT V+ L GI K G+ S+ ++ G+V +
Sbjct: 68 ISLGGLGSTGRLGHGDE--RKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTC 125
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGH +++I FL L+ L +KV A HS + +G+VY
Sbjct: 126 GRGYKGFLGHKNQNNIRSFL---------LVDALASLKVTQVCAARNHSLVVTSDGQVYS 176
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
FG ++ + + R P++I L + + C G H VLT G+++ WGS +G
Sbjct: 177 FGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGK 236
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
LG G + +P V+ + + CG+ AAI+ EG + TW
Sbjct: 237 LGQGDNESHFAPVLVRA-LEGKGIKSIQCGYDFAAAINVEGHLFTW 281
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 124/277 (44%), Gaps = 21/277 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSN 152
GL G+LG + Y +P + L K+ ++ + GY HS I+ G++Y G+
Sbjct: 72 GLGSTGRLGHGDERKYR-DPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYK 130
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G LG K I V+ L+ + Q S+ VT G+V S+G GRLGHG
Sbjct: 131 GFLG--HKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHG 188
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
++ P +I+ L G KV H+A + + G+V+++G D L
Sbjct: 189 DDAY---------RRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGS-GTDGKLG 238
Query: 273 QEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
Q N + P L+ L + + CG + G L+TWG G LG G +
Sbjct: 239 QGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRT 298
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWG 365
P V +E P+ ++CG H AAIS+ +L TWG
Sbjct: 299 VPSLVTA-LAEVPIRAIACGAGHMAAISDMNVLYTWG 334
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H+L +T G VY+ G G+LG ++ Y P I GL+ K+VVQ + H++ +T
Sbjct: 164 HSLVVTSDGQVYSFGFPKHGRLGHGDD-AYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTD 222
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G+++MWG ++G+LG G + P+ V L G K G++ + A+ G + +
Sbjct: 223 AGQVFMWGSGTDGKLGQGDNESHFAPV--LVRALEGKGIKSIQCGYDFAAAINVEGHLFT 280
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLGHG E + P L+ L V ++ A G H A I + +Y
Sbjct: 281 WGHGLGGRLGHGDEE---------NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLY 331
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKL---PYSE--------EVVCGGYHTCVLTS 305
+G A ++ + + P++++ L P + +V CG HT L S
Sbjct: 332 TWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLVS 387
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 24/234 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW- 201
LY WG S +G++A++ P L + + +A ++ A + G G +S
Sbjct: 13 LYTWGDQSL----IGREASEDHPADLPCPVLLHVGAEPSASTSSRTGAQIPGDGAAISTI 68
Query: 202 ---GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDEN 256
G G +GRLGHG E P L++ L +G+K K G+ HS I
Sbjct: 69 SLGGLGSTGRLGHGDERKY---------RDPTLVQSLHKQGIKAKSVVCGYFHSMVISSK 119
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
G+VY G + + N+ R L+ L + +V H+ V+TS G++Y++G
Sbjct: 120 GQVYTCGRGYKGFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGF 179
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++G LG G P ++G V Q +C H A +++ G++ WG G
Sbjct: 180 PKHGRLGHGDDAYRRLPTMIEG-LRGKKVVQTTCFGAHNAVLTDAGQVFMWGSG 232
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 379 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 438
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 439 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 497
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 498 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 555
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 556 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 606
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 607 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 666
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D SP V+ + V V CG TAAI
Sbjct: 667 TDDRSSPTLVES-LKDKQVRTVVCGINFTAAI 697
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 36/321 (11%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 354 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 412
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 413 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 470
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 471 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 521
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 522 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 579
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
++ CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG
Sbjct: 580 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM-LPVRVEGKLHKNFVEEISCG 638
Query: 350 WKHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 639 AYHVAVLTSRTEVYTWGKGAN 659
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ + G H+ + + G +Y +G+ + ++ +P LI L
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
E V CG YHTC +T G+LYTWG ++ +G LG G+ +V H P+RV GP V
Sbjct: 406 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 464
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWG 367
+SCG HTA + S G++ T+G G
Sbjct: 465 SAISCGPWHTAIVTSAGQLFTFGDG 489
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 150/319 (47%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P +A +H ++ +A GG H L LT G V++ G D G
Sbjct: 2756 GEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDG 2815
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L V ++ G +HS+A+T GELY WG G+LG G
Sbjct: 2816 KLGHGDVTSLD-TPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDN 2874
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +VE L G Q + G Q++A+ GG V SWG G G+LG G
Sbjct: 2875 LTQLTP--KRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGG----- 2927
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S +P L+ +L G+ V G S + NG VY +G ++ H
Sbjct: 2928 ----SEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV 2983
Query: 279 RRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R P+L+ L + V G H +T G+++ WG N++G G GSI V P VQG
Sbjct: 2984 RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQG 3043
Query: 337 PFSESPVDQVSCGWKHTAA 355
+ +V+CG H+ A
Sbjct: 3044 -IDGIKITRVACGSSHSVA 3061
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 135/293 (46%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG + P I L+ K+VV ++ G
Sbjct: 3705 AVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCD-RPRIIESLRGKDVVDVACGGA 3763
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+AIT GELY WGK G+LG G ++ P VE L G A G Q+ A
Sbjct: 3764 HSAAITALGELYTWGKGRYGRLGHGDSDDQLKP--KLVEALLGYRVMDVACGSGDAQTCA 3821
Query: 192 VTG--GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T GG V SWG G G+LG G S P I+ L G+ + G
Sbjct: 3822 ITDEEGGTVWSWGDGDYGKLGRGG---------SDGCKIPTKIESLSGLGIIKVECGSQF 3872
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
S + NG VY +G ++ H RRP + L + + G H V T G
Sbjct: 3873 SVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQG 3932
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
E+YTWG N+ G LG G+ + P R+ +++VSCG HT A S K
Sbjct: 3933 EVYTWGDNDEGQLGDGTTTGIQKP-RLVAALQNKKINRVSCGSAHTVAWSTCK 3984
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 148/304 (48%), Gaps = 27/304 (8%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGY 132
GG+ +LFL T++G YA G G+LG+ S N+ P +I+ L + VV+ + +G
Sbjct: 2738 GGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVN---SPHQITALSQHVVRKVAVHSGG 2794
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+T DG ++ WG+ +G+LG G + + P +E L+G + A G S AV
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHGDVTS--LDTPRCIEALNGFRVRDVAAGSNHSAAV 2852
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
T G++ +WG G GRLGHG + ++ TP+ ++ L G +V + G +
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGD---------NLTQLTPKRVESLVGQRVVQVSCGSRDAQT 2903
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
+ E G VY +GD K+ P L+ KL V CG + LT G
Sbjct: 2904 LALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGH 2963
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+YTWG + LG GS + P V+G V VS G H A+++ G++ WG
Sbjct: 2964 VYTWGKGDYFRLGHGSDQHVRWPTLVEG-LRGKKVIGVSVGALHCLAVTDAGQVFAWG-D 3021
Query: 368 GSHG 371
HG
Sbjct: 3022 NDHG 3025
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 42/322 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G + S P A ++ +A G H+ +T +G +Y GL ++G+
Sbjct: 2809 WGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N+ L P R+ L + VVQ+S G + A+ G +Y WG G+LG G
Sbjct: 2869 LGHGDNLT-QLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG- 2926
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P V+ LSG+ G + SVA+T G V +WG G RLGHG + +
Sbjct: 2927 -GSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV-- 2983
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G KV + G LH + + G+V+ +GD Q+GN +
Sbjct: 2984 -------RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHG----QQGNGSI 3032
Query: 279 ---RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
RRP+L+ + V CG H+ W + E + PE
Sbjct: 3033 TVNRRPTLVQGIDGIKITRVACGSSHS---------VAWTAPEPPSVA--------PPEP 3075
Query: 334 VQGPFSESPVDQVSCGWKHTAA 355
V P + P+ + G ++A
Sbjct: 3076 VPFPTIKDPLGSTAAGLTESSA 3097
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 19/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP + + + +ACGGAH+ +T G +Y G +G+
Sbjct: 3725 WGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGR 3784
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVD--GELYMWGKNSNGQLGL 157
LG ++ L+P + L + V +G + AIT + G ++ WG G+LG
Sbjct: 3785 LGHGDS-DDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGR 3843
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + IPTK+E LSG+ + G + SVA++ G V +WG G RLGHG + +
Sbjct: 3844 G--GSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHV 3901
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P+ + L+G KV + G LH + G VY +GD ++
Sbjct: 3902 ---------RRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTG 3952
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
++P L++ L + V CG HT
Sbjct: 3953 IQKPRLVAALQNKKINRVSCGSAHT 3977
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 167/358 (46%), Gaps = 33/358 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P VC A LA GG TLF +T G VYATG G
Sbjct: 3619 WGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLA-GGEQTLFAITSDGRVYATGYGAGG 3677
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE L+ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3678 RLGIGGAESVTVPSLLESLQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGH 3735
Query: 158 GKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K +P P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3736 GNK----LPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGD-- 3789
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI--DENGRVYIFGDRAVDKML 271
S + P+L++ L G +V A +G + I +E G V+ +GD K+
Sbjct: 3790 -------SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLG 3842
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ + P+ I L +V CG + L++ G +YTWG + LG G + +
Sbjct: 3843 RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVR 3902
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
P++V V +S G H ++ G++ TWG G DG ++G Q R
Sbjct: 3903 RPKKVMT-LQGKKVISISTGALHCVVCTDQGEVYTWG-DNDEGQLG-DGTTTGIQKPR 3957
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 139/293 (47%), Gaps = 39/293 (13%)
Query: 92 VYATGLNDFGQLG--------ISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVD 141
VY GLND QLG + + + + SL+P+ ++G K + +T
Sbjct: 2700 VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLF----------LVTQS 2749
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+ Y G+ SNG+LGLG ++ + P ++ LS ++ A+ G ++A+T G+V
Sbjct: 2750 GKAYACGEGSNGRLGLGH--SRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVF 2807
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG +S+ TPR I+ L G +V+ AAG HSA + +G +
Sbjct: 2808 SWGEGDDGKLGHGDVTSL---------DTPRCIEALNGFRVRDVAAGSNHSAAVTSSGEL 2858
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSN 315
Y +G ++ + P + L +V CG T L GG +Y+WG
Sbjct: 2859 YTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDG 2918
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
+ G LG G + SP V S V V CG + + A++ G + TWG G
Sbjct: 2919 DFGKLGRGGSEGCSSPCLVDK-LSGLGVCHVECGAQFSVALTCNGHVYTWGKG 2970
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 33/326 (10%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTET------GCVYATGLNDFGQLGISENIGYSLEP 115
PVV S +H + L +H T++ G +Y G N GQLG E +
Sbjct: 3582 PVVFS--HEHDQQLLQWMNSHPEDWTQSWTAVGGGQIYGWGHNHRGQLGGVEGAKVKVPT 3639
Query: 116 L--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ +S L+ +Q++ G AIT DG +Y G + G+ LG A+ + +P+ +E
Sbjct: 3640 VCEALSALRP--IQLAGGEQTLFAITSDGRVYATGYGAGGR--LGIGGAESVTVPSLLES 3695
Query: 174 LSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L +F K+ A+ G + +A++ G+V SWG G G+LGHG + PR+
Sbjct: 3696 LQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPC---------DRPRI 3746
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
I+ L G V A G HSA I G +Y +G ++ + + +P L+ L
Sbjct: 3747 IESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYR 3806
Query: 290 SEEVVCGG--YHTCVLTS--GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+V CG TC +T GG +++WG + G LG G D P +++ S + +
Sbjct: 3807 VMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIES-LSGLGIIK 3865
Query: 346 VSCGWKHTAAIS-EGKILTWGWGGSH 370
V CG + + A+S G + TWG G H
Sbjct: 3866 VECGSQFSVALSNNGSVYTWGKGDYH 3891
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 112/238 (47%), Gaps = 19/238 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S+++ +Y+WG N QLG G K +K I +P V+ + A G + VT
Sbjct: 2692 SSVSGAKRVYVWGLNDKEQLG-GPKGSK-IKVPQAVDWTVSLQPISVAGGSKSLFLVTQS 2749
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAA-AGFLHSACI 253
GK + G G +GRLG G ++ +P I L + V K+A +G H+ +
Sbjct: 2750 GKAYACGEGSNGRLGLGHSRNV---------NSPHQITALSQHVVRKVAVHSGGRHALAL 2800
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYT 311
+GRV+ +G+ K+ + P I L +V G H+ +TS GELYT
Sbjct: 2801 TADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYT 2860
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISEGKILTWGWG 367
WG E G LG G +P+RV+ + V QVSCG + T A+ EG L + WG
Sbjct: 2861 WGLGEYGRLGHGDNLTQLTPKRVESLVGQRVV-QVSCGSRDAQTLALVEGG-LVYSWG 2916
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 21/233 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ + G+N L L AA +++P + E F K + +V+G +V W
Sbjct: 2644 IQLVGRNVGNSLPLDDSAALARLLPPDFEFEQGDSAFNKSQQSVIQPISSVSGAKRVYVW 2703
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G +LG + S I P+ + ++ A G + ++G+ Y
Sbjct: 2704 GLNDKEQLGGPKGSKI---------KVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYA 2754
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYTWGSN 315
G+ + ++ + P I+ L S+ VV GG H LT+ G +++WG
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITAL--SQHVVRKVAVHSGGRHALALTADGRVFSWGEG 2812
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
++G LG G + L +P ++ + V V+ G H+AA+ S G++ TWG G
Sbjct: 2813 DDGKLGHGDVTSLDTPRCIEA-LNGFRVRDVAAGSNHSAAVTSSGELYTWGLG 2864
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G E RP + + +++ G H + T+ G VY G ND GQ
Sbjct: 3885 WGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQ 3944
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG G +P ++ L+ K++ ++S G H+ A
Sbjct: 3945 LGDGTTTGIQ-KPRLVAALQNKKINRVSCGSAHTVA 3979
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 123 bits (309), Expect = 1e-25, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 161/320 (50%), Gaps = 24/320 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G +G+LGLG S+ + F ++ + + G+ HTL LT+ G VY+ G +FG
Sbjct: 393 GKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFG 452
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG N+ P I G+ K +++ IS G HS+AIT DG+LY WG+ +G+LG G
Sbjct: 453 KLG-HGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGD 511
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
+ + +PT V + Q A G +V ++ V ++GAG +G+LGHG
Sbjct: 512 SSIQ--RVPTLVRSIDA--ASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGN----- 562
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ EY P+++ L+G+++K AAG S + G +Y++G + + H
Sbjct: 563 ----TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHL 618
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 335
P ++ L + ++ G H L++ E+Y+WG+N G G+G + P +V
Sbjct: 619 -LPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHCFTPVSLPTKVL 677
Query: 336 GPFSESPVDQVSCGWKHTAA 355
++Q+S G H+ A
Sbjct: 678 A-LDGIKIEQISTGTSHSFA 696
Score = 97.1 bits (240), Expect = 1e-17, Method: Composition-based stats.
Identities = 95/348 (27%), Positives = 164/348 (47%), Gaps = 39/348 (11%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
SS+L+ A WG+ +L G+ + P AF K++++ L G T L + G
Sbjct: 332 SSSLKHE-AYAWGSNSSHQLVEGNKDKILTPKKNDAF-KNAIQ-LEAGQYCTFALFDDGS 388
Query: 92 VYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGY---HHSSAITVDGELYMW 147
++A G G+LG+ ++ S + L +++ + + QIS+ H+ A+T +G +Y W
Sbjct: 389 LHACGKGSHGKLGLGDS--SSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSW 446
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA----ALGFEQSVAVTGGGKVLSWGA 203
G G+LG G A + +P + + G+F Q + G S A+T G + +WG
Sbjct: 447 GDGEFGKLGHGNVATQKLP-----KVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGE 501
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIF 262
G GRLGHG +SSI + P L++ ++ AAG H+ + ++ V+ F
Sbjct: 502 GEHGRLGHG-DSSI--------QRVPTLVRSIDAASQ--VAAGCSHTVVLSKDEMTVWTF 550
Query: 263 GDRAVDKMLFQEGNHARR--PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
G A D GN P ++ L +++ G + LT G +Y WG
Sbjct: 551 G--AGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGP-- 606
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
CLG+G+ D +H ++ + + +S G H A+S + ++ +WG
Sbjct: 607 CLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWG 654
Score = 93.2 bits (230), Expect = 2e-16, Method: Composition-based stats.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 37/299 (12%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
YA G N QL + N L P + K +Q+ G + + A+ DG L+ GK S+
Sbjct: 340 YAWGSNSSHQL-VEGNKDKILTPKKNDAFKN-AIQLEAGQYCTFALFDDGSLHACGKGSH 397
Query: 153 GQLGLGKKAAKVIPIPTKVECLS--GIFTKQ-----AALGFE-QSVAVTGGGKVLSWGAG 204
G+LGLG ++K +CL +F + ++ G + ++A+T G V SWG G
Sbjct: 398 GKLGLGDSSSK--------QCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDG 449
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV----KVKIAAAGFLHSACIDENGRVY 260
G+LGHG + T +L K + GV + +AG HSA I ++G +Y
Sbjct: 450 EFGKLGHGNVA------------TQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLY 497
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG-ELYTWGSNENGC 319
+G+ ++ + + R P+L+ + + +V G HT VL+ ++T+G+ +NG
Sbjct: 498 TWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGK 557
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
LG G+ + + P+ V + +++ G + + A++ G I WG G G + D
Sbjct: 558 LGHGNTKMEYYPKIVDA-LKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADA 615
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+G++G+LG G++ ++ P V+ F+ + ++ G H+ +T+ G +Y G + G
Sbjct: 446 WGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHG 505
Query: 102 QLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMW--GKNSNGQLG 156
+LG ++ S++ R+ L + + Q++ G H+ ++ D E+ +W G NG+LG
Sbjct: 506 RLGHGDS---SIQ--RVPTLVRSIDAASQVAAGCSHTVVLSKD-EMTVWTFGAGDNGKLG 559
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K+ P V+ L GI K+ A G + S+A+T G + WG G LG G +
Sbjct: 560 HGN--TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC--LGVGAADA 615
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+ P++++ L V + + G H + + VY +G+
Sbjct: 616 V--------HLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGN 655
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + A ++ +ACG HT +T G +Y G ++
Sbjct: 366 WGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 425
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RI+G + +V ++ G H++ IT G+L+ +G + G LG G
Sbjct: 426 GLLGHGTDVSHWI-PKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 484
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
+ + I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 485 DR--ENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKN 542
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P I L A G + + +GRV+ G V
Sbjct: 543 RLGHGDKDARL---------EPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGS-TV 592
Query: 268 DKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + + P L+ KL EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 593 YGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGD 652
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
++ +P V+ + V ++CG ++AAI
Sbjct: 653 VEDRKTPTLVEA-LKDRHVKYIACGSNYSAAI 683
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 102 QLGISENIGYS--------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
++G +N+ Y +PL S + +V+QI+ G H++ +T GE++ WG+ S G
Sbjct: 314 KVGADKNVSYCSPRTDILLPKPLE-SNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGG 372
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGH 211
+LG G K + P VE L+ A G + AVT G++ +WG G +G LGH
Sbjct: 373 RLGHG--VGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGH 430
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + S + P+ I LEG++V G H+A I G+++ FGD +
Sbjct: 431 GTD---------VSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVL 481
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT-----------SGGELYTWGSNEN 317
+ + P + L + V CG +HT + S G+L+TWG +
Sbjct: 482 GHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDK 541
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
LG G D P + + +++CG T + + G++ T G
Sbjct: 542 NRLGHGDKDARLEPTCISA-LIDYNFHRIACGHSLTVGLTTSGRVFTMG 589
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 41/257 (15%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ + ++G K + P +P +E + Q A G + + VT
Sbjct: 299 GDVYIWGEVISENVVKVGADKNVSYCSPRTDILLPKPLESNVVLDVLQIACGVKHAALVT 358
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ +WG GRLGHG +++ P L++ L V A G H+ +
Sbjct: 359 RQGEMFTWGEESGGRLGHGVGKNVV---------QPCLVEALASSTVDFVACGEFHTCAV 409
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTS 305
G +Y +GD + L G P I+ ++ + V CG +HT ++TS
Sbjct: 410 TMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAF---VTCGPWHTALITS 466
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------- 358
G+L+T+G G LG G + + P V+ S V+CG HTAAI E
Sbjct: 467 TGQLFTFGDGTFGVLGHGDRENISYPREVES-LSGLRTVSVACGVWHTAAIVEVIVTQSS 525
Query: 359 -----GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 526 ASISSGKLFTWGDGDKN 542
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 157/328 (47%), Gaps = 21/328 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P S++ ACG +HTL LT+ G +++ G ND
Sbjct: 6 WGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + P IS L+ +V +S G HS A+T G+++ WG NS GQLG
Sbjct: 66 GQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG-HD 124
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ ++ Q A G S+A+T G++ SWGA G G+LG G
Sbjct: 125 TDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG------- 177
Query: 220 FLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T E TP L+K L G+ + A G HS + ++G ++ +G ++ +
Sbjct: 178 ---TTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVS 234
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P + L + CG + LT G ++T G+ G LG G+ P R+
Sbjct: 235 RCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILP-RMV 293
Query: 336 GPFSESPVDQVSCGWKHTAAI--SEGKI 361
S + Q++CG +HT A S GKI
Sbjct: 294 FELMGSKITQIACGRRHTLAFVPSRGKI 321
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 17/300 (5%)
Query: 44 GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG + L ++ RP S+ E + + ++CG H+L LT G V++ G N G
Sbjct: 61 GNNDHGQLGHDTDCLPNK-RPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQI++G HS A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV+ PT V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GEKVV-TPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND------- 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P+ +K L + V+ + G SA + + G V+ G ++ ++
Sbjct: 232 --LVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL 289
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P ++ +L S+ ++ CG HT S G++Y +G G LG+G I ++P+ V+GP
Sbjct: 290 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVISNYNTPQIVRGP 349
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG +G+LGLG + + +P +++ +QAA G ++ +T GK+ S G
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+V+ +G
Sbjct: 63 NDHGQLGHDTD--------CLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWG 114
Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ ++ P +I + ++ G +H+ LT+ GEL++WG+N G L
Sbjct: 115 SNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQL 174
Query: 321 GIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G+G+ + + +P V+ + P+ ++CG H+ A+S+ G I WG
Sbjct: 175 GLGTTGEKVVTPTLVKS-LAGIPIAFIACGGNHSFAVSKSGAIFGWG 220
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG + FLT+ G V+ G FGQ
Sbjct: 219 WGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
LG L + + ++ QI+ G H+ A + G++Y
Sbjct: 279 LGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 24/258 (9%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV+++ G HS+ +T G LY++G N GQLGLG K + P+ V+ L ++ A
Sbjct: 40 VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLG--HTKSLNKPSFVKPLKPEKVRKVAC 97
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ + GK+ S+G G+LGH + +E P+ I+ + +++K A
Sbjct: 98 GRNHTIVYSESGKLFSFGCNEDGQLGH---------VDKENELLPKEIESIPQMEIKQIA 148
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTC 301
G HS + E+G VY++G+ ++ E SL KL + +EVV CG YHT
Sbjct: 149 CGTYHSIILSEDGDVYVWGNNNEGQLGLGE---EVENSLPKKLKFKKEVVSVSCGYYHTA 205
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAIS-E 358
++T G LYT+G NE G LG+ S + ++ P+ V P VSCG +HT AI+ +
Sbjct: 206 LVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQ 265
Query: 359 GKILTWGWGGS----HGT 372
G WG G HGT
Sbjct: 266 GHCYAWGDGSQGQLGHGT 283
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 26/307 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHH 134
+ACG H+ +TE+G +Y G ND+GQLG+ + +P + LK E V +++ G +H
Sbjct: 43 MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLN-KPSFVKPLKPEKVRKVACGRNH 101
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + G+L+ +G N +GQLG K ++ +P ++E + + KQ A G S+ ++
Sbjct: 102 TIVYSESGKLFSFGCNEDGQLGHVDKENEL--LPKEIESIPQMEIKQIACGTYHSIILSE 159
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACI 253
G V WG G+LG G+E P+ +K + E V V + G+ H+A +
Sbjct: 160 DGDVYVWGNNNEGQLGLGEE---------VENSLPKKLKFKKEVVSV---SCGYYHTALV 207
Query: 254 DENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
+G +Y FG+ + K+ ++ P ++ ++E V CG HT +T G
Sbjct: 208 TRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGH 267
Query: 309 LYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
Y WG G LG G+ + ++ P++++ S VSCG HTA ++E GK+ T+G
Sbjct: 268 CYAWGDGSQGQLGHGTKLLEVNEPKQIK-KLSGQKCISVSCGESHTAVVTESGKVFTFG- 325
Query: 367 GGSHGTF 373
G HG
Sbjct: 326 DGRHGKL 332
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 147/318 (46%), Gaps = 65/318 (20%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +S +P + ++ +ACG HT+ +E+G +++ G N+ G
Sbjct: 61 VFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDG 120
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + L P I + + E+ QI+ G +HS ++ DG++Y+WG N+ GQLGLG++
Sbjct: 121 QLGHVDKEN-ELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEE 179
Query: 161 AAKVIPIPTK-------VEC-------------------------------LSGIFTKQA 182
+P K V C LS Q+
Sbjct: 180 VENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQS 239
Query: 183 -------------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+ G +VA+T G +WG G G+LGHG + L +E P
Sbjct: 240 VAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTK------LLEVNE--P 291
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISKL 287
+ IK+L G K + G H+A + E+G+V+ FGD K+ E + + P +S+
Sbjct: 292 KQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRF 351
Query: 288 PYSEEVV--CGGYHTCVL 303
Y V CGG HT VL
Sbjct: 352 NYFNVVYVSCGGCHTLVL 369
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
E+ CG H+ V+T G LY +GSN+ G LG+G L+ P V+ P V +V+CG
Sbjct: 42 EMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVK-PLKPEKVRKVACGRN 100
Query: 352 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR-GQLTPSE 393
HT SE GK+ ++G +EDG G +D+ +L P E
Sbjct: 101 HTIVYSESGKLFSFGC-------NEDGQL--GHVDKENELLPKE 135
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 158/336 (47%), Gaps = 29/336 (8%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WG+ YG+LG G+ R+ P AL+ HTL L + G V+
Sbjct: 458 QDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHTLALAQDGTVWGW 517
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G ND GQLG + ++ + P + GL V +++G +HS A+ DG ++ WG N+ GQL
Sbjct: 518 GYNDSGQLGDTVDM-VRVTPAPLPGLTG-VTALASGTYHSLALKQDGTVWAWGLNNLGQL 575
Query: 156 GLGKKAAKV--IPIP--TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G G ++ +P+P T V L A S+A+ G V +WG SG+LG
Sbjct: 576 GDGTTVSRTEQMPVPGLTDVTAL--------AASTYHSLALKQDGTVWTWGYNSSGQLGD 627
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +S L TP + L GV AAG +HS + ++G V+ +G ++
Sbjct: 628 GTTASRL---------TPAQVPGLTGVSA--IAAGLVHSLALKQDGTVWAWGRNTDGQLG 676
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
++ P + L + G YH+ L G ++WG N G LG +I +P
Sbjct: 677 NGAAVNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTP 736
Query: 332 ERVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGW 366
+VQG + V ++ G H+ A + +G + TWG+
Sbjct: 737 VQVQG---LTAVTALAGGDAHSMALLRDGTVWTWGY 769
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 19/294 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG R P + ALA G H+L L + G V+A GLN+ GQ
Sbjct: 517 WGYNDSGQLGDTVDMVRVTPAPLPGLT--GVTALASGTYHSLALKQDGTVWAWGLNNLGQ 574
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + E + + GL +V ++ +HS A+ DG ++ WG NS+GQLG G A+
Sbjct: 575 LGDGTTVSRT-EQMPVPGLT-DVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTAS 632
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V L+G+ A G S+A+ G V +WG G+LG+G
Sbjct: 633 RLTPA--QVPGLTGV--SAIAAGLVHSLALKQDGTVWAWGRNTDGQLGNGA--------- 679
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L GV AAG HS + ++G + +G ++ + + P
Sbjct: 680 AVNSPVPVQVQGLTGVSAI--AAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTPV 737
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ L + G H+ L G ++TWG N G LG G+ +P RVQG
Sbjct: 738 QVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTAPVRVQG 791
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 26/270 (9%)
Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+S + LE P S + V I+ G HS + DG WG N GQLG G
Sbjct: 420 LGLSASASMILEGGTPCAPS--PRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGT 477
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P P +V+ L+G T +A + ++A+ G V WG SG+LG +
Sbjct: 478 SVDRFLPGPVQVQGLTGA-TALSATAY-HTLALAQDGTVWGWGYNDSGQLGD-----TVD 530
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+R TP + L GV A+G HS + ++G V+ +G + ++ +G
Sbjct: 531 MVR----VTPAPLPGLTGVTAL--ASGTYHSLALKQDGTVWAWGLNNLGQL--GDGTTVS 582
Query: 280 RPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
R + L + YH+ L G ++TWG N +G LG G+ +P +V G
Sbjct: 583 RTEQMPVPGLTDVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPG- 641
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+ V ++ G H+ A+ + + W WG
Sbjct: 642 --LTGVSAIAAGLVHSLALKQDGTV-WAWG 668
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+VY G V
Sbjct: 473 RLGHGDKEPRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 522
Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + P L+ KL EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 523 YGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGD 582
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
++ +P V E V ++CG TAAI
Sbjct: 583 VEDRKAPTLVDA-LKERHVKNIACGSNFTAAI 613
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 36/340 (10%)
Query: 52 GLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
+G L SR ++ E + + +ACG H ++ G V+ G G+LG
Sbjct: 250 NIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLG--HG 307
Query: 109 IGYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKV 164
+G + P I L + ++ G H+ A+T+ GE+Y WG ++ G LG G +
Sbjct: 308 MGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHW 367
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
IP ++ L G+ + G + +T G++ ++G G G LGHG + ++
Sbjct: 368 --IPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETV------ 419
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----------NGRVYIFGDRAVDKMLF 272
+ PR ++ L G++ A G H+A I E +G+++ +GD ++
Sbjct: 420 ---FYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGH 476
Query: 273 QEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ +P+ +S L V CG T LT+ G++YT GS G LG + D
Sbjct: 477 GDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KL 535
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
P V+ ++ V++++CG H A + S ++ TWG G +
Sbjct: 536 PCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGAN 575
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 111/254 (43%), Gaps = 41/254 (16%)
Query: 142 GELYMWGK---------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++Y+WG+ ++ +G LG ++ +IP P + + + A G + +
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAAL 286
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
V+ G+V +WG GRLGHG + G P+LI+ L + A G H+
Sbjct: 287 VSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSIDFVACGEFHTC 337
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTS 305
+ G +Y +GD + L G P IS P V CG +HT ++TS
Sbjct: 338 AVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITS 396
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------- 358
G+L+T+G G LG G + + P V+ S V+CG H AAI E
Sbjct: 397 TGQLFTFGDGTFGVLGHGDKETVFYPREVES-LSGLRTIAVACGVWHAAAIVEVIVTHSS 455
Query: 359 -----GKILTWGWG 367
GK+ TWG G
Sbjct: 456 SSVSSGKLFTWGDG 469
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 150/329 (45%), Gaps = 20/329 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 3239 GYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ KEV+ I+ G HS+ +T GELY WGK G+LG G
Sbjct: 3299 KLG-HGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDS 3357
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P + L G A G Q++ ++ V SWG G G+LG G
Sbjct: 3358 EDQLRP--KMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG----- 3410
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ + L + V G S + ++G VY +G ++ +H
Sbjct: 3411 ----SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV 3466
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
RRP ++ L + + G H + GE+YTWG N+ G LG G+ + + P R+
Sbjct: 3467 RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRP-RIVT 3525
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWG 365
+ + V+CG HT A S K L G
Sbjct: 3526 ALQDKKITNVACGSAHTVAWSTSKPLHAG 3554
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 170/343 (49%), Gaps = 32/343 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-GGAHTLFL-TETGCVYATGLND 99
+WG D +LG G S+ + V + F SLK + C GG+ +LF+ T G VYA G
Sbjct: 2210 VWGLNDKDQLG-GPRGSKIKTPVLNEFLS-SLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267
Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+LG+ S+N+ P +++GL + VV+ + +G H+ A+TVDG+++ WG+ +G+
Sbjct: 2268 NGRLGLGSSQNVDI---PKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2324
Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
LG L + + P +E L + A G S AVT G++ +WG G GRLGHG
Sbjct: 2325 LGHLSRMNCEK---PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKML 271
ST++ P+L+K L G +V A G + + + G VY +GD K+
Sbjct: 2382 ---------STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG 2432
Query: 272 FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
P + +L ++ CG + LT G+++TWG + LG G+ +
Sbjct: 2433 RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVR 2492
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
P+ +G + V+ G H A+++ G++ WG HG
Sbjct: 2493 KPQVAEG-LKGKKIIHVAVGALHCLAVTDTGQVFAWG-DNDHG 2533
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 148/319 (46%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLGS ++ P + ++ +K +A GG H + LT G V++ G D G
Sbjct: 2264 GEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 2323
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2324 KLGHLSRMNCE-KPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDS 2382
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V+ L G Q A G Q++ +T G V SWG G G+LG G
Sbjct: 2383 TTQLRP--KLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGG----- 2435
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P ++ L G V G S + + G+V+ +G ++ +H
Sbjct: 2436 ----SEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHV 2491
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P + L + V G H +T G+++ WG N++G G GS V P VQG
Sbjct: 2492 RKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKPALVQG 2551
Query: 337 PFSESPVDQVSCGWKHTAA 355
+ +V+CG H+ A
Sbjct: 2552 -LEGVRITRVACGSSHSTA 2569
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP V + + +ACGGAH+ +T +G +Y G +G+
Sbjct: 3292 WGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGR 3351
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L P LK V+ ++ G S + + D ++ WG G+LG G
Sbjct: 3352 LGHGDSED-QLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG- 3409
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P KV+ LS I + G + S+A+T G V +WG G RLGHG + +
Sbjct: 3410 -GSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV-- 3466
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G VY +GD ++ N +
Sbjct: 3467 -------RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQ 3519
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
RP +++ L + V CG HT ++ L+
Sbjct: 3520 RPRIVTALQDKKITNVACGSAHTVAWSTSKPLH 3552
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 133/263 (50%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 2317 WGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L P + L K V+Q++ G + +T+ +G +Y WG G+LG G
Sbjct: 2377 LGHGDST-TQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG- 2434
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P VE L+G Q G + S+A+T G+V +WG G RLGHG +S +
Sbjct: 2435 -GSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHV-- 2491
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++ + L+G K+ A G LH + + G+V+ +GD + +
Sbjct: 2492 -------RKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNK 2544
Query: 280 RPSLISKLP--YSEEVVCGGYHT 300
+P+L+ L V CG H+
Sbjct: 2545 KPALVQGLEGVRITRVACGSSHS 2567
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT +E L+ + Q G + AVT GK+ +
Sbjct: 3181 GTIYGWGHNHRGQLG-GIEGAKV-KVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYAT 3238
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G SGRLG G S+ TP L++ ++ V +K A +G H+ + G V
Sbjct: 3239 GYGASGRLGIGGTDSV---------STPTLLESIQHVHIKKVAVNSGGKHALALSVEGEV 3289
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP +I L E ++ CGG H+ +TS GELYTWG
Sbjct: 3290 YSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRY 3349
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G + P+ +D V+CG T IS+ + W WG G +G
Sbjct: 3350 GRLGHGDSEDQLRPKMADALKGYRVID-VACGSGDSQTLCISDDDNV-WSWGDGDYGKL 3406
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H + + ++++WG N QLG G + +K I P E LS + A G + VT
Sbjct: 2198 HGGSREIQTKVFVWGLNDKDQLG-GPRGSK-IKTPVLNEFLSSLKVVCCAGGSKSLFVVT 2255
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
GKV + G G +GRLG G ++ P+ + L VK A +G H+
Sbjct: 2256 AEGKVYACGEGTNGRLGLGSSQNV---------DIPKQVNGLSQYVVKKVAVHSGGRHAM 2306
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ +G+V+ +G+ K+ + +P L+ L ++ CG H+ +TS GEL
Sbjct: 2307 ALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGEL 2366
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS---EGKILTWGW 366
YTWG E G LG G P+ V+ + V QV+CG + ++ EG + +WG
Sbjct: 2367 YTWGLGEYGRLGHGDSTTQLRPKLVKALVGKR-VIQVACGSRDAQTLTLTDEGMVYSWGD 2425
Query: 367 G 367
G
Sbjct: 2426 G 2426
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 171/374 (45%), Gaps = 61/374 (16%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG LG+G ++ PV + + + +ACG H++ LT G VY+ G N
Sbjct: 818 WGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNH 876
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+GQLG G + P+ + L E +V +S G +HS AI+ G+L+ WG GQLG G
Sbjct: 877 YGQLGTGRR-GQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHG 935
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A P ++ L A G+ S+ +T GKV ++G+G G+LG+G + I
Sbjct: 936 --AIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKI- 992
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------------R 265
TS + E +K + H+ + + GR+Y +G R
Sbjct: 993 -----TSPVPVYGLPE----PIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKR 1043
Query: 266 AVDKMLFQEGNHAR----------------RPSLISKLPYSEEVV---CGGYHTCVLTSG 306
A ++++ EG+ A P+L+ S ++ CG +H+ V+++
Sbjct: 1044 ARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTT 1103
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSE---------SPVDQVSCGWKHTAAI 356
G+LYTWG N +G LG+ I P + GP S S + +V CG T A+
Sbjct: 1104 GQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLAL 1163
Query: 357 SEGKILTWGWGGSH 370
L WGWG +H
Sbjct: 1164 DAANKL-WGWGSNH 1176
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 27/296 (9%)
Query: 107 ENIGYSLEPL-RISGLKKEVVQIST---GYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
E++ YS +P+ +S + E+ S+ G+ H++ I + +LY WG +S G LG+G
Sbjct: 775 ESVSYSHQPISNVSDSENEIEHKSSLGAGWAHAAHIR-NHKLYTWGHSSYGCLGVGPHMT 833
Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P P + Q A G S+A+T G V SWG+ G+LG G+
Sbjct: 834 KTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNHYGQLGTGR-------- 884
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R + Y P L+ L + +AG HS I +G+++ +G ++ + +P
Sbjct: 885 RGQAPY-PMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKP 943
Query: 282 SLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
L+ L +E ++ GGY H+ +LTS G+++T+GS G LG GS + SP V G
Sbjct: 944 KLLKSLE-NENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITSPVPVYG-- 1000
Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
P+ + + H A+S+ G++ TWG F H+ + R QL +E
Sbjct: 1001 LPEPIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRF----HAQSQKRARNQLVLNE 1052
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 40/214 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
+G+G +G+LG GS PV + +K + H L L++ G +Y G
Sbjct: 976 FGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQVL 1034
Query: 97 ---------------LNDFGQLGISENIGYS-------LEPLRI--SGLKKEVVQISTGY 132
LN+ Q +E + L P + S + ++ Q+ G
Sbjct: 1035 RFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGC 1094
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---------ECLSGIFTKQAA 183
HHS+ I+ G+LY WG N +GQLG+ +++P T V SG K+
Sbjct: 1095 HHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVR 1154
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + ++A+ K+ WG+ G+LG E +
Sbjct: 1155 CGADFTLALDAANKLWGWGSNHEGQLGKIPEEDL 1188
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 46/289 (15%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF-TK 180
+K +++S G+ H + I+ GEL+ WGKN +GQLG G K+ P ++E G
Sbjct: 1217 EKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPII 1276
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G E S+ V V SWG G+LGHG +S S+ P++I+++ G K+
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGT--------KSVSQNRPKIIEDISGQKI 1328
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEE------- 292
+ AAGF H+ + ++G +Y FG + + S +SK +P E
Sbjct: 1329 QAIAAGFAHTIVLKKSGELYSFG--------YGDQGQLGHGSFVSKSIPTRIELNTIVGI 1380
Query: 293 ---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
+ CG H+ + + GE+Y+WG + G LG G+ + + P ++ + V
Sbjct: 1381 QHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIE---ALKGV 1437
Query: 344 DQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
++SCG +T A ++ K + +WG G H GH S D+ + TP
Sbjct: 1438 TKISCGHFYTMATTDLKNVYSWGL-GEHMKL---GHGS----DKNEATP 1478
Score = 121 bits (304), Expect = 5e-25, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGL--KKEV 125
EK ++K ++CG H ++E+G ++ G N GQLG +IG P R+ K +
Sbjct: 1217 EKRAIK-VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPI 1275
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ + G HS + D +Y WG++ GQLG G K+ P +E +SG + A G
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQ-NRPKIIEDISGQKIQAIAAG 1334
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G++ S+G G G+LGHG S + + + E + + G K+ A
Sbjct: 1335 FAHTIVLKKSGELYSFGYGDQGQLGHG--SFVSKSIPTRIELNTIVGIQHGGGKITQIAC 1392
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
GF HS +NG VY +G ++ RP LI L ++ CG ++T T
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKISCGHFYTMATTD 1452
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+Y+WG E+ LG GS D + RV F + V ++ CG HT ++
Sbjct: 1453 LKNVYSWGLGEHMKLGHGS-DKNEATPRVVDFFIQKNVSKIVCGLNHTITLT 1503
Score = 108 bits (271), Expect = 4e-21, Method: Composition-based stats.
Identities = 112/408 (27%), Positives = 161/408 (39%), Gaps = 108/408 (26%)
Query: 43 WGNGDYGRLG----LGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGL 97
WG G+LG +G +++ P F K + + CGG H++ + VY+ G
Sbjct: 1242 WGKNQSGQLGHGLDIGKIQTT--PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQ 1299
Query: 98 NDFGQLG-----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ FGQLG +S+N +E ISG K + I+ G+ H+ + GELY +G
Sbjct: 1300 DKFGQLGHGTKSVSQNRPKIIED--ISGQK--IQAIAAGFAHTIVLKKSGELYSFGYGDQ 1355
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
GQLG G +K IP ++ + GI Q A GF SV + G+V SWG G G
Sbjct: 1356 GQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQG 1415
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG SI PRLI+ L+GV KI+ F A D VY +G
Sbjct: 1416 QLGHGNYESIA---------RPRLIEALKGV-TKISCGHFYTMATTDLKN-VYSWGLGEH 1464
Query: 268 DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGEL---------------- 309
K+ + P ++ ++VCG HT LT G+L
Sbjct: 1465 MKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFID 1524
Query: 310 -------------------------------------YTWGSNENGCLGIGSIDVLHSPE 332
Y G+ E+G LG+G
Sbjct: 1525 LAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGG-------- 1576
Query: 333 RVQGPFSESPVD------------QVSCGWKHTAAI-SEGKILTWGWG 367
++ PF + P+ +SCG TA I S G + WG+G
Sbjct: 1577 DLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYG 1624
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 84/343 (24%), Positives = 126/343 (36%), Gaps = 76/343 (22%)
Query: 43 WGNGDYGRLGLGSLESRWRP-------VVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
+G GD G+LG GS S+ P +V + +ACG H++ ++ G VY+
Sbjct: 1350 FGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSW 1409
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GL GQLG N P I LK V +IS G+ ++ A T +Y WG + +L
Sbjct: 1410 GLGKQGQLG-HGNYESIARPRLIEALKG-VTKISCGHFYTMATTDLKNVYSWGLGEHMKL 1467
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV----------------- 198
G G + P V+ + G ++ +T G +
Sbjct: 1468 GHGSDKNEAT--PRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDL 1525
Query: 199 --------------LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G SGRLG L S+ +P + G K+
Sbjct: 1526 APSTSNSSSSSSLTNDNNNGRSGRLG----------LNENSQVSP-IYACGAGEHGKLGL 1574
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
G L S D+ I G A++ + ++ CG T ++T
Sbjct: 1575 GGDLKSPFFDKPIPTAIKGVNALNLI---------------------DISCGTDFTAMIT 1613
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
S G LY WG G +G G D P R+ P ++S +Q S
Sbjct: 1614 SNGALYVWGYGNFGQIGNGKTDDAWVPIRI--PLTDSKANQSS 1654
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 156/326 (47%), Gaps = 29/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + + A+ G +H+L L G V+A G N GQ
Sbjct: 110 WGDNPNGQLGEGTTTRRLVPVQVQGLSE--VVAVTAGSSHSLALRSDGTVWAWGANASGQ 167
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ + GL EVV + G HS A+ DG ++ WG N++GQLG G
Sbjct: 168 LGEGTTTN-RLVPVPVLGL-SEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P V+ LSG+ +A G+ S+AV G V +WG SG+LG + ++
Sbjct: 226 RLVP----VQVLSGVVAMEAGSGY--SLAVRNDGTVWAWGYNFSGQLG---DDTV----- 271
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TS TP + L +V AAG S + +G V+ +G D EG + R
Sbjct: 272 -TSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVWAWGSN--DYGQRGEGTTSNRAF 326
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P L V G H+ + S G ++ WGSN +G LG G+ P +VQG
Sbjct: 327 PVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQG---L 383
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
S V VS G + AI S+G + WG
Sbjct: 384 SGVVAVSAGASSSLAIRSDGTVWAWG 409
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 25/323 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN G+LG G+ ++R PV + + A A G H+L L G V+A G N +GQL
Sbjct: 11 GNNGSGQLGDGTRDNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAWGYNGYGQL 68
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + ++G EP+++ GL V + G++HS A+ DG ++ WG N NGQLG G +
Sbjct: 69 G-NGSLGSRAEPVQVQGLSGG-VSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRR 126
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
++P+ +V+ LS + A G S+A+ G V +WGA SG+LG G +
Sbjct: 127 LVPV--QVQGLSEVVAVTA--GSSHSLALRSDGTVWAWGANASGQLGEGT---------T 173
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T+ P + L +V AG HS + +G V+ +G A ++ +G +R
Sbjct: 174 TNRLVPVPVLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQL--GDGTTTKRLVP 229
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
+ L + G ++ + + G ++ WG N +G LG ++ +P +V G S V
Sbjct: 230 VQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLG---LSEV 286
Query: 344 DQVSCGWKHTAAI-SEGKILTWG 365
V+ G + A+ S+G + WG
Sbjct: 287 VAVAAGSSLSLALRSDGTVWAWG 309
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 153/324 (47%), Gaps = 25/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG GSL SR PV ++ G H+L + + G V+A G N GQ
Sbjct: 60 WGYNGYGQLGNGSLGSRAEPVQVQGLSGG--VSVDAGHYHSLAVRDDGTVWAWGDNPNGQ 117
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL EVV ++ G HS A+ DG ++ WG N++GQLG G
Sbjct: 118 LGEGTTT-RRLVPVQVQGLS-EVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTTTN 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+P V LS + +A G S+A+ G V +WGA SG+LG G
Sbjct: 176 RLVPVP--VLGLSEVVAVEA--GSSHSLALRSDGTVWAWGANASGQLGDGT--------- 222
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P ++ L GV A +G+ S + +G V+ +G ++ P
Sbjct: 223 TTKRLVP--VQVLSGVVAMEAGSGY--SLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPV 278
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L V G + L S G ++ WGSN+ G G G+ P + +G S
Sbjct: 279 QVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNRAFPVQARG---LSG 335
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
V+ G+ H+ A+ S+G + WG
Sbjct: 336 GVAVAAGYAHSLAVRSDGTVWAWG 359
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 27/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ SR PV + + A+A G + +L L G V+A G ND+GQ
Sbjct: 258 WGYNFSGQLGDDTVTSRSTPVQVLGLSE--VVAVAAGSSLSLALRSDGTVWAWGSNDYGQ 315
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + N + P++ GL V ++ GY HS A+ DG ++ WG N++GQLG G
Sbjct: 316 RGEGTTSNRAF---PVQARGLSGGVA-VAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTT 371
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P+ +V+ LSG+ A G S+A+ G V +WG+ SG+LG G
Sbjct: 372 SNRSEPV--QVQGLSGVVAVSA--GASSSLAIRSDGTVWAWGSNASGQLGDGT------- 420
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P ++ L GV +A F S + +G V+ +G ++
Sbjct: 421 --TTDRLVPVQVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVLV 476
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P ++ L V G H+ + S G ++ G N+NG LG GS +P +V G
Sbjct: 477 PVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQVTG---L 533
Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWG 365
S V V+ G H+ A+ +G + WG
Sbjct: 534 SGVVSVAAGDSHSLAVRYDGSVWAWG 559
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 136/284 (47%), Gaps = 24/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + A+ G + +L + G V+ G N +GQ
Sbjct: 408 WGSNASGQLGDGTTTDRLVPVQVQGLSG--VVAVVAGTSFSLAVRNDGTVWGWGYNGYGQ 465
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ + L P++++GL VV ++ G HS A+ DG ++ G+N NGQLG G
Sbjct: 466 LGTFTSL-FVLVPVQVTGLSG-VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTN 523
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LSG+ + A G S+AV G V +WG G+LG G F R
Sbjct: 524 RSAPV--QVTGLSGVVS--VAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSW-----FQR 574
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
S P + L G + +AA+ +S + +G V+ +G ++ +G +
Sbjct: 575 S----APVQVTGLSG-RGSVAASSD-YSMAVRYDGTVWAWGFNLYGQL--GDGTTSSNQL 626
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L V G H+ L S G ++TWG N G LG G
Sbjct: 627 VPVQVQQLRGVVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G V+A G N GQLG S P+++ GL EVV + G HS A+ DG ++ WG
Sbjct: 5 GTVWAAGNNGSGQLGDGTRDNRS-TPVQVLGLS-EVVAAAAGSIHSLALRNDGTVWAWGY 62
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG G ++ P+ +V+ LSG + A G S+AV G V +WG +G+L
Sbjct: 63 NGYGQLGNGSLGSRAEPV--QVQGLSGGVSVDA--GHYHSLAVRDDGTVWAWGDNPNGQL 118
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G +T P ++ L +V AG HS + +G V+ +G A +
Sbjct: 119 GEGT---------TTRRLVPVQVQGLS--EVVAVTAGSSHSLALRSDGTVWAWGANASGQ 167
Query: 270 MLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+ EG R + L SE V G H+ L S G ++ WG+N +G LG G+
Sbjct: 168 L--GEGTTTNRLVPVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
P +V S V + G ++ A+ ++G + WG
Sbjct: 226 RLVPVQVL-----SGVVAMEAGSGYSLAVRNDGTVWAWG 259
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R +WG G G LG+ S + V + A+A G H+L + G V+A G
Sbjct: 450 RNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALG 509
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
ND GQLG S P++++GL VV ++ G HS A+ DG ++ WG NS GQLG
Sbjct: 510 RNDNGQLGDGSWTNRS-APVQVTGLSG-VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLG 567
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + P+ +V LSG + A+ + S+AV G V +WG G+LG G SS
Sbjct: 568 DGSWFQRSAPV--QVTGLSGRGSVAASSDY--SMAVRYDGTVWAWGFNLYGQLGDGTTSS 623
Query: 217 ILGFLRSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFG 263
++ P +++L G V V++ ++ HS + +G V+ +G
Sbjct: 624 --------NQLVPVQVQQLRGVVAVEVGSS---HSLALRSDGTVWTWG 660
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 109/229 (47%), Gaps = 25/229 (10%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
DG ++ G N +GQLG G + + P+ +V LS + AA G S+A+ G V +
Sbjct: 4 DGTVWAAGNNGSGQLGDGTRDNRSTPV--QVLGLSEVVA--AAAGSIHSLALRNDGTVWA 59
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRV 259
WG G G+LG+G L S +E P ++ L GV V AG HS + ++G V
Sbjct: 60 WGYNGYGQLGNGS-------LGSRAE--PVQVQGLSGGVSVD---AGHYHSLAVRDDGTV 107
Query: 260 YIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD ++ EG RR P + L V G H+ L S G ++ WG+N +
Sbjct: 108 WAWGDNPNGQL--GEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANAS 165
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G LG G+ P V G S V V G H+ A+ S+G + WG
Sbjct: 166 GQLGEGTTTNRLVPVPVLG---LSEVVAVEAGSSHSLALRSDGTVWAWG 211
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVTI--GKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 121 LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
K +V V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L
Sbjct: 32 FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKV 89
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKE 234
K AA G ++ T GG V + G G+LG G ++ F TSE+
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH------- 140
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
K+K +AG SA + E+GR++++GD + ++ + ++ P ++ +
Sbjct: 141 ----KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKH 352
CG YH+ +T+ GELY +G ENG LG+ + L R SE P V QV+CG +H
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEH 254
Query: 353 TAAISEGKILTWGWG 367
T ++E + T+G G
Sbjct: 255 TVVLTENAVYTFGLG 269
>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Megachile rotundata]
Length = 864
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 161/326 (49%), Gaps = 22/326 (6%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ + S F K + ++ CG H+ + ++G ++ G ND+GQLG+ S +P
Sbjct: 92 SRFADNIASHFFIRKDPVVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHIS-KP 150
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
+ LK E V ++ G H+ T +++ G + GQLG G A + P+
Sbjct: 151 SCVKVLKPEKVTHVACGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYD 210
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L+G Q A G S+A+ G V +WG+ G+LG S ++ + T + P
Sbjct: 211 AGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVN--KPTKVHIPEP 268
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+K++ +AG+ HSA + E+G VYI G+ K+ + +LP
Sbjct: 269 VKQI--------SAGYYHSAFLTESGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPA 320
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSC 348
V CGG+HT VL G +Y GSN NG LG+G+ + LH+P+ + +G + ++SC
Sbjct: 321 VHVACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISC 380
Query: 349 GWKHTAAISE-GKILTWGWGGSHGTF 373
G HTA ++E GK+ T G G HG
Sbjct: 381 GESHTAIVTESGKLFTCG-DGRHGKL 405
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 25/323 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +P + + +ACG AHTL T ++A G + G
Sbjct: 130 VFGSNDWGQLGLGHRNHISKPSCVKVLKPEKVTHVACGRAHTLISTGAQKIFACGSDQEG 189
Query: 102 QLGI-SENIG-YSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLG + IG S P+ + +GL +++Q++ G HHS A+ DG ++ WG N GQLG
Sbjct: 190 QLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLG 249
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + ++ PTKV + KQ + G+ S +T G V G SG+LG
Sbjct: 250 L-PDVSGLVNKPTKVHIPEPV--KQISAGYYHSAFLTESGLVYICGESESGKLGID---- 302
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG 275
+ F +++ TP+ + +L V +A G H+ + ENG +Y G + ++ L
Sbjct: 303 -VNF---STQITPKQM-QLPSPAVHVACGGH-HTVVLAENGNIYCTGSNSNGQLGLGTNV 356
Query: 276 NHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHS 330
P L+S+ E + CG HT ++T G+L+T G +G LG+ + + +H
Sbjct: 357 TELHTPKLLSRGMLQNETISRISCGESHTAIVTESGKLFTCGDGRHGKLGLEENENNVHE 416
Query: 331 PERVQGPFSESPVDQVSCGWKHT 353
VQ + E V +V+CG HT
Sbjct: 417 LTFVQR-YKELFVSKVACGGCHT 438
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 150/308 (48%), Gaps = 30/308 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHGTF 373
G HG
Sbjct: 321 -DGRHGKL 327
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 171/356 (48%), Gaps = 28/356 (7%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+L G + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPNQLLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVL-HSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+T G +YT+G +G LG+G + H + F V V+CG H +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVTI--GKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 121 LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
K +V V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L
Sbjct: 32 FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKV 89
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKE 234
K AA G ++ T GG V + G G+LG G ++ F TSE+
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH------- 140
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
K+K +AG SA + E+GR++++GD + ++ + ++ P ++ +
Sbjct: 141 ----KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKH 352
CG YH+ +T+ GELY +G ENG LG+ + L R SE P V QV+CG +H
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEH 254
Query: 353 TAAISEGKILTWGWG 367
T ++E + T+G G
Sbjct: 255 TVVLTENAVYTFGLG 269
>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 447
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 147/311 (47%), Gaps = 20/311 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG G+ E+ PV + +KA++ G +L L G V+A G N +GQ
Sbjct: 94 WGSNSYGELGDGTNENSIEPVQVAGLT--GVKAISAGKGFSLALKGDGSVWAWGSNTYGQ 151
Query: 103 LGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + SL P+++ GL+ VV IS G H A+ +G L+ WG+NS+G LG G
Sbjct: 152 LGKNPLSFMGSLTPIQVEGLEG-VVSISCGGSHCFALQENGVLWAWGENSHGILGDGTNE 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG----QESSI 217
++ P+ K++ + + ++AV G V +WG G+LG G +
Sbjct: 211 SQFKPVKPKIKDVKAFDAGE----LSHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGR 266
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
+ R Y P +++ + K AAG HS + +G V+ +G + ++ G
Sbjct: 267 ISLGREADNYNPDIVRGVS--DAKAVAAGGSHSVALASDGSVWAWGSNSDGQLGLGHAGG 324
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
+ P+ + + + G YHT L G ++ WGSN +G LG S SP +
Sbjct: 325 SDVTSPTRVQGIEGVTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASSPVPIL 384
Query: 335 ---QGPFSESP 342
Q P + SP
Sbjct: 385 IGPQIPTAASP 395
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L + V I+ S A+ DG ++ WG+ +G P +V+ +SG+ +
Sbjct: 26 LSPQAVAIAASNCTSVALLEDGSVWQWGRVCDG---------VEWSAPQRVD-ISGV--R 73
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G +A+ G G V +WG+ G LG G E+SI P + L GVK
Sbjct: 74 QIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSI----------EPVQVAGLTGVK 123
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGG 297
A GF S + +G V+ +G ++ + + P + L + CGG
Sbjct: 124 AISAGKGF--SLALKGDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGG 181
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H L G L+ WG N +G LG G+ + P +
Sbjct: 182 SHCFALQENGVLWAWGENSHGILGDGTNESQFKPVK 217
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
V+ AAG H + +G V+ +G + ++ ++ P ++ L + + G
Sbjct: 72 VRQIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSIEPVQVAGLTGVKAISAGKGF 131
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
+ L G ++ WGSN G LG + + S +Q E V +SCG H A+ E
Sbjct: 132 SLALKGDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEGVV-SISCGGSHCFALQEN 190
Query: 360 KILTWGWG-GSHGTFSE 375
+L W WG SHG +
Sbjct: 191 GVL-WAWGENSHGILGD 206
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 150/308 (48%), Gaps = 30/308 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHGTF 373
G HG
Sbjct: 321 -DGRHGKL 327
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + +V G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 305 WGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNA 364
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+SG + +V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 365 GLLGHGSDVSHWI-PKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHG 423
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + I P +VE LSG+ T A G + AV GK+ +WG G
Sbjct: 424 DR--ENISYPKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 481
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V+ G V
Sbjct: 482 RLGHGDKEPRL---------KPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGS-TV 531
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + P L+ + E EV CG YH VLTS E+YTWG NG LG G
Sbjct: 532 YGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGD 591
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
++ +P V+ + V ++CG +TAAI
Sbjct: 592 VEDRKTPTLVEA-LKDRHVKYIACGSNYTAAI 622
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ ++G K ++ V + +P +E + A G + VT
Sbjct: 238 GDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVLLPRPLESNIVLDIHHIACGVRHAALVT 297
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG ++ PR+++ L + A G H+ +
Sbjct: 298 RQGEVFTWGEESGGRLGHGVVKDVI---------QPRMVESLAASSIGFVACGEFHTCAV 348
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G+ P +S P V CG +HT ++TS G
Sbjct: 349 TITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSG-PLEGLQVTSVTCGPWHTALVTSMG 407
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+L+T+G G LG G + + P+ V+ S V+CG HTAA+ E
Sbjct: 408 QLFTFGDGTFGALGHGDRENISYPKEVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSSS 466
Query: 359 ---GKILTWGWG 367
GK+ TWG G
Sbjct: 467 ISSGKLFTWGDG 478
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 32/282 (11%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
PL S + ++ I+ G H++ +T GE++ WG+ S G+LG G K + P VE L
Sbjct: 274 PLE-SNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VVKDVIQPRMVESL 330
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLI 232
+ A G + AVT G++ +WG G +G LGHG + S + P+ +
Sbjct: 331 AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSD---------VSHWIPKRV 381
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
LEG++V G H+A + G+++ FGD + + + P + L
Sbjct: 382 SGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLR 441
Query: 290 SEEVVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ V CG +HT + G+L+TWG + LG G + P V
Sbjct: 442 TIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA-L 500
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWG--GSHGTFSEDG 377
+ +V+CG T + + G++ + G G G S DG
Sbjct: 501 IDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADG 542
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
Query: 196 GKVLSWGA-GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V WG G + G E + T PR ++ + + A G H+A +
Sbjct: 238 GDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVLLPRPLESNIVLDIHHIACGVRHAALVT 297
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTW 312
G V+ +G+ + ++ +P ++ L S V CG +HTC +T GELYTW
Sbjct: 298 RQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTITGELYTW 357
Query: 313 --GSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
G++ G LG GS DV H P+RV GP V V+CG HTA + S G++ T+G
Sbjct: 358 GDGTHNAGLLGHGS-DVSHWIPKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFG--- 413
Query: 369 SHGTFSEDGH 378
GTF GH
Sbjct: 414 -DGTFGALGH 422
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 254 DENGRVYIFGDRAVDKMLF--QEGNHAR---RPSLISKLPYSEEVV-------CGGYHTC 301
D G VYI+G+ D ++ E N + R ++ P +V CG H
Sbjct: 235 DALGDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVLLPRPLESNIVLDIHHIACGVRHAA 294
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
++T GE++TWG G LG G + + P V+ + S + V+CG HT A++ G+
Sbjct: 295 LVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVES-LAASSIGFVACGEFHTCAVTITGE 353
Query: 361 ILTWGWG 367
+ TWG G
Sbjct: 354 LYTWGDG 360
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 161/346 (46%), Gaps = 25/346 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-TGLNDFG 101
WG G G LG G + P V A H +K L G HT+ L +G VY+
Sbjct: 164 WGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGR 223
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
E ++ PLR++GL+ ++ I+ +HS A+ +GE Y+WG+ +G LG+ G
Sbjct: 224 LGQGRERDRFT--PLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGD 281
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K PT++ L G AA G ++ V G+V + G G+LG G ++
Sbjct: 282 KHVS----PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAM-- 335
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
SE P L+ L V+I A G H+ + E GR+Y +G + ++ E R
Sbjct: 336 -----SE--PTLVTNLPERIVRI-ACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDR 387
Query: 280 -RPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P + ++V CGG HT +L++ G LY +GS G LG+G + +
Sbjct: 388 LSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATPAA 447
Query: 336 GPFSE-SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
P E +SCG +AA+S+ GKI TWG G S+ DG +
Sbjct: 448 LPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGRT 493
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 133/265 (50%), Gaps = 17/265 (6%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A +WG G G LG+ + P A + + ACG A TLF+ E+G VYA G N+
Sbjct: 265 AYVWGRGIDGSLGVEG-DKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNE 323
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLGI N S EP ++ L + +V+I+ G H+ A++ G LY WG +S+GQLG+G+
Sbjct: 324 HGQLGIGSNEAMS-EPTLVTNLPERIVRIACGNSHAVALSETGRLYAWGAHSSGQLGVGE 382
Query: 160 KAAKVIPIPTKVECLSGIFTKQAA---LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +VE S + A G ++ ++ G + ++G+G G+LG
Sbjct: 383 PLEDRLS-PVRVE--SNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLG------ 433
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG L + ++ TP + EG K + G SA + + G++Y +G A + + +G
Sbjct: 434 -LGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGR 492
Query: 277 HARRPSLISKLP--YSEEVVCGGYH 299
P+LI + V CG +H
Sbjct: 493 TKYAPTLIESMADKRCRTVACGFFH 517
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 110/210 (52%), Gaps = 12/210 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN ++G+LG+GS E+ P + + + ++ +ACG +H + L+ETG +YA G + GQL
Sbjct: 320 GNNEHGQLGIGSNEAMSEPTLVTNLPERIVR-IACGNSHAVALSETGRLYAWGAHSSGQL 378
Query: 104 GISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ E + L P+R+ ++ +V + G +H+ ++ G LY +G + GQLGLG A
Sbjct: 379 GVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLA 438
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P + G + G + S AV+ GK+ +WG+G S+ LG
Sbjct: 439 TKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGA---------SNALGLP 489
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++Y P LI+ + + + A GF H A
Sbjct: 490 DGRTKYAPTLIESMADKRCRTVACGFFHMA 519
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 87/214 (40%), Gaps = 49/214 (22%)
Query: 198 VLSWGAGGSGRLGHGQES---------SILGF---------------------------- 220
V +WG G G LGHG+E ++LG
Sbjct: 161 VYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGL 220
Query: 221 ------LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
R +TP + L G + A HS + +NG Y++G R +D L E
Sbjct: 221 GGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWG-RGIDGSLGVE 279
Query: 275 GNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
G+ P+ I L V CG T + GE+Y G+NE+G LGIGS + + P
Sbjct: 280 GDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPT 339
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V E V +++CG H A+SE G++ WG
Sbjct: 340 LVTN-LPERIV-RIACGNSHAVALSETGRLYAWG 371
>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Nomascus leucogenys]
Length = 704
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTRNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG H L TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWGKNS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAAVTEDGRLFMWGKNSEGQIGL--KNVPNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+L G S +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPSQLLGNHR-----TPQLVSEIPEKVIQVARGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+ G +YT+G++ +G LG+G
Sbjct: 310 IRDIGLMYTFGNSRHGKLGLG 330
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 ILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
AVT G++ WG G++G ++ P+ + G V + G+ HS
Sbjct: 154 AVTEDGRLFMWGKNSEGQIGLKNVPNVC---------VPQQVTI--GKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V GG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPSQLLGNH-RTPQLVSEIPEKVIQVARGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I + G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIRDIGLMYTFG 320
Query: 366 WGGSHG 371
HG
Sbjct: 321 -NSRHG 325
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 22/306 (7%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G + ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
T G+++T+G N G LG P+ V+ E V Q+ CG HT A + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 362 LTWGWG 367
+++G G
Sbjct: 310 VSFGRG 315
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 27/272 (9%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAA 355
L+ G + WGSN G L + + +P + P S V +SCG+KHTA
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTLGVVSISCGYKHTAV 250
Query: 356 IS-EGKILTWGWGGSHGTFSED--GHSSGGQL 384
++ +GK+ T+G S+G D G QL
Sbjct: 251 LTQDGKVFTFG-DNSYGQLGHDPTAEKRGPQL 281
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW--GAGGSGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+ G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 164/337 (48%), Gaps = 42/337 (12%)
Query: 43 WGNGDYG-----RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG G G R+GLG +E L+ A G H+L L G V++ G
Sbjct: 5 WGPGPRGPVSRRRVGLGGVE---------------LRQAASGERHSLLLLSNGQVHSCGD 49
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG S + RI L+ V +S G HS A+ G ++ WG S GQLG
Sbjct: 50 NGRGQLG-QRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 157 LGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ K +IP+ K++ L+ I KQ + G S+A++ GG+V SWG+ G+LG G+
Sbjct: 109 TGEFKETNLIPM--KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGK-- 164
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ S+ +P+ ++ L+G+ + AAG HS + +G + +G ++ +
Sbjct: 165 ------KFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKN 218
Query: 276 N---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
N + +P IS L + CG HT VLT G+++T+G N G LG
Sbjct: 219 NVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG 278
Query: 331 PERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 365
P+ V+G + V Q+ CG HT A + GK++++G
Sbjct: 279 PQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P+ + L G+ +QAA G S+ + G+V S G G G+LG R
Sbjct: 12 PVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKR--- 68
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPS 282
I+ LE + V + + G HS + GRV+ +G + ++ F+E N P
Sbjct: 69 ------IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PM 120
Query: 283 LISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFS 339
I L ++V CG YH+ L+ GG++++WGSN +G LG+G SP+RV+
Sbjct: 121 KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS-LD 179
Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
P+ QV+ G H+ A+S ++GWG ++
Sbjct: 180 GIPLAQVAAGGAHSFALSLSGT-SFGWGRNNA 210
>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Takifugu rubripes]
Length = 388
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 161/367 (43%), Gaps = 38/367 (10%)
Query: 48 YGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
YG+LG G +E R P +C +A + +++ + GG HT +TE G V+ G N GQLG+
Sbjct: 5 YGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHRGQLGL 64
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
S R GL + V ++ G+ + +T G + G N+ GQLG+G+K A
Sbjct: 65 GHLTDISTLQ-RCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKPAYTA 123
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
+ VE L AA G S+AVT G V WG G + S + S
Sbjct: 124 DVQI-VESLKAAVVSVAA-GLRHSLAVTDSGCVYQWGIGLMSQAKRTLSPSPVP--SHLS 179
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
P L+ L ++ AAG +H C+ ENG ++++G ++L E P L S
Sbjct: 180 SVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQLLSSE------PFLSS 233
Query: 286 KLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGCLG-------IGSIDVLH 329
P ++ G H T G ++TWG G LG
Sbjct: 234 PTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQSTT 293
Query: 330 SPERVQGPFSESP----VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ V+ P E P Q++CG +H AI G++L+WGW HG + H+ +
Sbjct: 294 EDQEVRLP-EEVPALQGATQITCGSEHNLAILGGRLLSWGW-NEHGMCGDGSHA---DVF 348
Query: 386 RGQLTPS 392
+ QL P+
Sbjct: 349 QPQLVPA 355
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 143/338 (42%), Gaps = 46/338 (13%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G+LGLG L C + ++ + CG TLFLT++G V + G N FGQL
Sbjct: 55 GQNHRGQLGLGHLTDISTLQRCLGLTQ-TVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQL 113
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI + Y+ + + LK VV ++ G HS A+T G +Y WG G + K+
Sbjct: 114 GIGQKPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQWGI---GLMSQAKRTLS 170
Query: 164 VIPIPTK--------VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
P+P+ V L+ ++ A G V +T G + WG+ H Q
Sbjct: 171 PSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSN-----KHSQLL 225
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S FL S TP L G V +G+ H E GRV+ +G ++ G
Sbjct: 226 SSEPFLSSP---TPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQL----G 278
Query: 276 NHA-----------------RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
HA R P + L + ++ CG H + GG L +WG NE+G
Sbjct: 279 RHASTSQSSESQSTTEDQEVRLPEEVPALQGATQITCGSEHNLAIL-GGRLLSWGWNEHG 337
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G GS + P+ V + P+ + CG H+ A+
Sbjct: 338 MCGDGSHADVFQPQLVP---ALRPL-LIGCGAGHSMAV 371
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 34/287 (11%)
Query: 98 NDFGQLGISENIGYSLEPL----RISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSN 152
N +GQLG + G P+ + LK + V++ TG H++ IT DGE+++ G+N
Sbjct: 3 NSYGQLG---HGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHR 59
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLGLG + I T CL T G++ ++ +T G+VLS G+ G+LG
Sbjct: 60 GQLGLG----HLTDISTLQRCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGI 115
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------D 264
GQ+ + + ++++ L+ V + AAG HS + ++G VY +G
Sbjct: 116 GQKPAYTADV--------QIVESLKAAVVSV-AAGLRHSLAVTDSGCVYQWGIGLMSQAK 166
Query: 265 RAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
R + + PSL+ L S V G H LT G+L+ WGSN++ L +
Sbjct: 167 RTLSPSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQL-L 225
Query: 323 GSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
S L SP V+ V +V GW H A +E G++ TWG G
Sbjct: 226 SSEPFLSSPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRG 272
>gi|130488540|ref|NP_001076272.1| Williams-Beuren syndrome chromosome region 16 [Danio rerio]
gi|126631511|gb|AAI33898.1| Si:dkeyp-36f5.3 protein [Danio rerio]
Length = 451
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 26/306 (8%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKE 124
++ + ++CG AH+L LT++ V++ G N FGQ G I E+ YS + +I G
Sbjct: 159 QETRVPQVSCGRAHSLVLTDSEGVFSMGSNTFGQCGRKIVEDEVYSGSHVVHKIEGFDSR 218
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V+Q++ G HS +T G ++ G ++GQ GLG P+P + L+G+ +Q A
Sbjct: 219 VIQVACGQDHSLFLTDRGSVFACGWGADGQTGLGHHNKASCPVPVGGD-LAGVTVQQVAT 277
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIA 243
+ S+AV+ G+V WG +L ES+ + +PRL+ L+GV +++ A
Sbjct: 278 YGDCSLAVSTDGQVFGWGNSEYLQLASVTESTQIS--------SPRLL-PLKGVGRIRQA 328
Query: 244 AAGFLHSACIDENGRVYI--FGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVV---C 295
A G A ++E+G V++ FG L + R P+ S+ + +V C
Sbjct: 329 ACGGTQVAVLNEDGDVFVWGFGILGKGPKLSESAIPERVPATFFGRSEFNPTVKVASIRC 388
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H +T GGEL+ WG N GCLGIG D + P RV P V V+CG H A
Sbjct: 389 GLSHFAAVTDGGELFVWGKNVRGCLGIGKHDDQYFPWRVTVP---GHVTDVACGVDHMVA 445
Query: 356 ISEGKI 361
+ + I
Sbjct: 446 LVKSLI 451
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 122 bits (306), Expect = 3e-25, Method: Composition-based stats.
Identities = 107/346 (30%), Positives = 162/346 (46%), Gaps = 34/346 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ +R PV+ + + + G ++ L + G V+ G N+ GQ
Sbjct: 57 WGYGDRGQLGDGTWNTRTTPVMAKNL--NHVIDIHSGVRSSMALRQDGTVWTWGANENGQ 114
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI I P ++ GL + IS G +H A++ +G ++ WGKN NG+LG G
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTI 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V LS + T AA G+ S+A+ G V +WG GSG LG G
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T + P + L V AAG HS I ++G V+ +G+ + H RP
Sbjct: 221 -TTDRHVPVQVAGL--TDVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTRP 277
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ L + V GGYH+ + G +++WG N LG+ S P V G
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPVPGI---E 334
Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
V ++S G H+ A+ + + WGW G++SGGQ+ G
Sbjct: 335 HVREISAGGFHSVAMKKDGTV-WGW----------GYNSGGQIGDG 369
Score = 111 bits (277), Expect = 7e-22, Method: Composition-based stats.
Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 20/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
WG + G+LG+G++ + P +KA++ G A H + L+E G V+ G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG I + P+ ++GL +V I+ G ++S A+ DG ++ WG N +G+LG G
Sbjct: 165 ELGNGTTIQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ +V L+ + A G S+A+ G V +WG G LG G
Sbjct: 223 DRHVPV--QVAGLTDVMA--IAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTR------- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T P ++ L+ + V +A G+ HS +D G V+ +GD + ++ + P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIP 327
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ + + E+ GG+H+ + G ++ WG N G +G G+
Sbjct: 328 VPVPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGT 370
Score = 94.7 bits (234), Expect = 7e-17, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+I GY+H++++ GE+Y WG GQLG G + P+ K L+ + + G
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G V +WGA +G+LG G +++ P + L G+K I+
Sbjct: 93 RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
H + ENG V+ +G ++ P L++ L + GGY++ L S
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
G ++ WG N +G LG G+ H P +V G + V ++ G H+ AI + + W W
Sbjct: 203 GTVWAWGVNGSGELGDGTTTDRHVPVQVAG---LTDVMAIAAGGSHSLAIKQDGTV-WAW 258
Query: 367 G-GSHGTFSE 375
G ++GT +
Sbjct: 259 GNNTYGTLGD 268
Score = 85.9 bits (211), Expect = 3e-14, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G+ R PV + + A+A GG+H+L + + G V+A G N +G
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGLT--DVMAIAAGGSHSLAIKQDGTVWAWGNNTYGT 265
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ L + +V ++ G +HS A+ G ++ WG NS QLGL A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNAS 323
Query: 163 KVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+IP+P + GI ++ + G SVA+ G V WG G++G G ++ G
Sbjct: 324 SLIPVP-----VPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRG 376
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 147/317 (46%), Gaps = 26/317 (8%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+LGLG ++ + H++K ++CG HT+ L + G +Y+ G ND+
Sbjct: 4 WGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGSNDY 63
Query: 101 GQLGISENIGY-----SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQ G N + E +RI+ + S G +H+ AI +Y WG NS+GQL
Sbjct: 64 GQTGRQRNNKRFARIDAFESMRITNVS------SNGANHNLAINDKNCIYAWGDNSDGQL 117
Query: 156 GLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + K P +++ LS Q A G S+AV G V SWG+ G+LG
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS- 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S P+ I +L G + AAG HS I +G + +G + ++
Sbjct: 177 --------NVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGT 228
Query: 275 GNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ P+ +S L + CG HT VLT G ++T+G+ +G LG S+ SP+
Sbjct: 229 NDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCSPQ 288
Query: 333 RVQGPFSESPVDQVSCG 349
V V Q++CG
Sbjct: 289 MVVDLMG-IVVTQITCG 304
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 19/262 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQ 102
G+ DYG+ G R+ + AFE + ++ GA H L + + C+YA G N GQ
Sbjct: 59 GSNDYGQTGRQRNNKRFARI--DAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQ 116
Query: 103 LGISE-NIG-YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+++ N+ + P +I L K VVQ++ G HS A+ DG ++ WG N GQLG+
Sbjct: 117 LGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V P ++ LSG + Q A G S+A+T G +L+WG G+LG G +L
Sbjct: 177 NVSSV--EPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVL- 233
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+P + L + AA G H+A + + G V+ FG + ++ +H
Sbjct: 234 --------SPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHC 285
Query: 280 RPSLISKLP--YSEEVVCGGYH 299
P ++ L ++ CG ++
Sbjct: 286 SPQMVVDLMGIVVTQITCGRFY 307
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 15/246 (6%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGF 186
IS G +H+ + DG++Y G N GQ G + + +++ + T ++ G
Sbjct: 39 ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRF----ARIDAFESMRITNVSSNGA 94
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ + +WG G+LG + ++ F R TPR IK L V A G
Sbjct: 95 NHNLAINDKNCIYAWGDNSDGQLG-VTDQNLKQFYR-----TPRQIKSLSKFAVVQVACG 148
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
HS + +G V+ +G ++ + P I KL Y ++ GG H+ +T
Sbjct: 149 QSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAIT 208
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILT 363
+ G L TWG N G LG+G+ D + SP V S+ + +CG HTA ++ EG + T
Sbjct: 209 NSGALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRSQH-IAYAACGEDHTAVLTKEGGVFT 267
Query: 364 WGWGGS 369
+G G S
Sbjct: 268 FGAGSS 273
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 159/327 (48%), Gaps = 29/327 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R PV + AL+ G +H+L L G V+A G N GQ
Sbjct: 270 WGYNSYGQLGDGTTTPRLSPVQVPGLTN--VVALSAGYSHSLALRTDGTVWAWGYNYNGQ 327
Query: 103 LGISENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG I P + + GL +VV +S GY HS A+ DG ++ WG NS GQLG G
Sbjct: 328 LG--NGIPTQRSPSIPVFGLI-DVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTI 384
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P P +V L+ + A G S+A+ G V +WG SG+LG G
Sbjct: 385 PR--PSPVQVPDLTDVVALSA--GDSHSLALRTDGTVRAWGVNYSGQLGDGT-------- 432
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T +P + +L V V ++A G H+ + NG V+ +G + ++ +G R
Sbjct: 433 -TTHRLSPVQVPDLTDV-VALSAGGN-HTLALRTNGTVWAWGSNSDGQL--GDGTTTPRL 487
Query: 282 SLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
S + L + V G YH+ + + G ++ WGSN +G LG G+ +P +V G
Sbjct: 488 SPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPG--- 544
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ V +S G H+ A+ ++G + WG
Sbjct: 545 LTDVVALSAGDSHSLALRTDGTVWAWG 571
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 138/294 (46%), Gaps = 23/294 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + AL+ GG HTL L G V+A G N GQ
Sbjct: 420 WGVNYSGQLGDGTTTHRLSPVQVPDLTD--VVALSAGGNHTLALRTNGTVWAWGSNSDGQ 477
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV +S GY+HS A+ DG ++ WG NS+GQLG G
Sbjct: 478 LGDGTTT-PRLSPVQMLGLTN-VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTH 535
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + A G S+A+ G V +WG+ S +LG G
Sbjct: 536 RLTPV--QVPGLTDVVALSA--GDSHSLALRTDGTVWAWGSNSSSQLGDGT--------- 582
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T +P + L V +AG HS + +G V+ +G ++ +G R
Sbjct: 583 TTPRGSPVQVPGL--TDVVALSAGGAHSLALRTDGTVWAWGSNYYGQL--GDGTTTPRLF 638
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P L+S L + + G H+ L + G WG+N G LG G+ P +V
Sbjct: 639 PVLVSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 43/322 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G +H+L L G V+A G N GQLG P+++ GL +VV +S G HH
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG-SPVQVPGLT-DVVALSAGNHHC 58
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG NS+GQLG G ++ + +V L+ + A G ++A+
Sbjct: 59 LALRTDGTVWAWGSNSSGQLGDGTTTPRLSSV--QVPGLTDVVALSA--GSSYTLALRTD 114
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIA-AAGFLHSACI 253
G V +WG G+LG G TPRL ++ G+ +A ++G HS +
Sbjct: 115 GTVWAWGYNFYGQLGDGTT-------------TPRLAPVQVPGLTDVVALSSGIYHSLAL 161
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G V+ +GD A ++ +G RR S + ++P +VV GGYH+ + + G ++
Sbjct: 162 RTDGTVWAWGDNASGQL--GDGTATRRLSPV-QVPGLTDVVALSAGGYHSLAVRTDGTVW 218
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
WGSN +G LG G+ SP +V G + V +S +T A+ ++G + W W
Sbjct: 219 AWGSNFSGQLGDGTATPRLSPVQVSG---LTNVVALSADDSYTLALRTDGTV--WAW--- 270
Query: 370 HGTFSEDGHSSGGQLDRGQLTP 391
G++S GQL G TP
Sbjct: 271 -------GYNSYGQLGDGTTTP 285
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 33/330 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R V + AL+ G ++TL L G V+A G N +GQ
Sbjct: 70 WGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALSAGSSYTLALRTDGTVWAWGYNFYGQ 127
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL +VV +S+G +HS A+ DG ++ WG N++GQLG G
Sbjct: 128 LGDGTTT-PRLAPVQVPGLT-DVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATR 185
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + A G S+AV G V +WG+ SG+LG G
Sbjct: 186 RLSPV--QVPGLTDVVALSA--GGYHSLAVRTDGTVWAWGSNFSGQLGDGTA-------- 233
Query: 223 STSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TPRL ++ G+ +A +A ++ + +G V+ +G + ++ +G R
Sbjct: 234 -----TPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQL--GDGTTTPR 286
Query: 281 PSLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
S + ++P VV GY H+ L + G ++ WG N NG LG G I SP
Sbjct: 287 LSPV-QVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG-IPTQRSPSIPV-- 342
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
F V +S G+ H+ A+ ++G + WG+
Sbjct: 343 FGLIDVVALSAGYSHSLALRTDGTVWAWGY 372
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + AL+ G +H+L L G V A G+N GQ
Sbjct: 370 WGYNSLGQLGDGTTIPRPSPVQVPDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQ 427
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ L +VV +S G +H+ A+ +G ++ WG NS+GQLG G
Sbjct: 428 LGDGTTT-HRLSPVQVPDL-TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTP 485
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ ++ L+ + A G+ S+AV G V +WG+ G+LG G
Sbjct: 486 RLSPV--QMLGLTNVVALSA--GYYHSLAVHTDGTVWAWGSNSDGQLGDGT--------- 532
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L V +AG HS + +G V+ +G + ++ +G R S
Sbjct: 533 TTHRLTPVQVPGL--TDVVALSAGDSHSLALRTDGTVWAWGSNSSSQL--GDGTTTPRGS 588
Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ ++P +VV GG H+ L + G ++ WGSN G LG G+
Sbjct: 589 PV-QVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGT 632
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 23/325 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + AL+ G H L L G V+A G N GQ
Sbjct: 20 WGSNSSGQLGDGTTTPRGSPVQVPGLTD--VVALSAGNHHCLALRTDGTVWAWGSNSSGQ 77
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L +++ GL +VV +S G ++ A+ DG ++ WG N GQLG G
Sbjct: 78 LGDGTTT-PRLSSVQVPGL-TDVVALSAGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTP 135
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + + G S+A+ G V +WG SG+LG G
Sbjct: 136 RLAPV--QVPGLTDVVALSS--GIYHSLALRTDGTVWAWGDNASGQLGDGT--------- 182
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +P + L V V ++A G+ HS + +G V+ +G ++ P
Sbjct: 183 ATRRLSPVQVPGLTDV-VALSAGGY-HSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPV 240
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L + +T L + G ++ WG N G LG G+ SP +V G +
Sbjct: 241 QVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPG---LTN 297
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGW 366
V +S G+ H+ A+ ++G + WG+
Sbjct: 298 VVALSAGYSHSLALRTDGTVWAWGY 322
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 122 bits (305), Expect = 4e-25, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 140/295 (47%), Gaps = 25/295 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG GS R PV S+ A H+L L G V+A G N++GQ
Sbjct: 110 WGFNGYGQLGDGSTTGRNTPVQVEGLR--SIVGAAAHYDHSLALKSDGTVWAWGRNEYGQ 167
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+R+ GL VV IS+G+ +S A+ DG ++ WGKN GQLG G
Sbjct: 168 LGDGSKTDRH-TPVRVKGL-DSVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQ 225
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +V+ L + A G ++A+ G V SWG +G+LG G +
Sbjct: 226 SSAPV--QVQGLHSV--TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSD-------- 273
Query: 223 STSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
YTP ++EG + AGF HS + +G V+ +G+ ++ F P
Sbjct: 274 -MDRYTP---VQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGSST----P 325
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ +L ++ G H+ + + G ++ WG N+NG LG G+ +P +VQG
Sbjct: 326 VQVQELDSVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKVQG 380
Score = 119 bits (299), Expect = 2e-24, Method: Composition-based stats.
Identities = 105/352 (29%), Positives = 170/352 (48%), Gaps = 42/352 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +LG GS PV + HS++A+A GG+H L + G V+A G N +GQ
Sbjct: 63 WGGG---QLGNGSTTGSPAPVQVQ--DLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQ 117
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G + P+++ GL + +V + Y HS A+ DG ++ WG+N GQLG G K
Sbjct: 118 LGDGSTTGRN-TPVQVEGL-RSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTD 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L + + G+ S+AV G V +WG G+LG+G
Sbjct: 176 RHTPV--RVKGLDSVVAISSGFGY--SLAVKSDGTVWAWGKNEYGQLGNGS--------- 222
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T P ++ L V A+G H+ I +G V+ +G ++ +G+ R
Sbjct: 223 TTQSSAPVQVQGLHSVTA--VASGDYHNLAIKRDGTVWSWGPNLAGQL--GDGSDMDRYT 278
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + + +V G H+ L S G ++ WG+ + G GS +P +VQ +
Sbjct: 279 PVQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGS----STPVQVQE--LD 332
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
S VD ++ G +H+ A+ ++G + W WG + DG S+ +LTP
Sbjct: 333 SVVD-IAAGTQHSLAVRNDGTV--WAWGKNDNGQLGDGTST------ARLTP 375
Score = 110 bits (275), Expect = 1e-21, Method: Composition-based stats.
Identities = 103/319 (32%), Positives = 153/319 (47%), Gaps = 28/319 (8%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
VV + ++ A G +HTL L G V+A G GQLG G S P+++ L
Sbjct: 31 VVAAKSTYSGIRMAAGGESHTLALNANGTVWAWG---GGQLGNGSTTG-SPAPVQVQDLH 86
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V I+ G H+ AI DG ++ WG N GQLG G + P+ +VE L I A
Sbjct: 87 -SVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPV--QVEGLRSIVG--A 141
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A ++ S+A+ G V +WG G+LG G + T +TP +K L+ V V I
Sbjct: 142 AAHYDHSLALKSDGTVWAWGRNEYGQLGDGSK---------TDRHTPVRVKGLDSV-VAI 191
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
++ GF +S + +G V+ +G ++ + P + L V G YH
Sbjct: 192 SS-GFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQGLHSVTAVASGDYHNLA 250
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
+ G +++WG N G LG GS ++P +V+G FS S VD V G+ H+ A+ S+G +
Sbjct: 251 IKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEG-FS-SAVD-VDAGFGHSLALKSDGTV 307
Query: 362 LTWGWGGSHGTFSEDGHSS 380
W WG F+E G S
Sbjct: 308 --WAWGNYQ--FNEWGFGS 322
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R+ PV F S + G H+L L G V+A G F +
Sbjct: 260 WGPNLAGQLGDGSDMDRYTPVQVEGFS--SAVDVDAGFGHSLALKSDGTVWAWGNYQFNE 317
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G S P+++ L VV I+ G HS A+ DG ++ WGKN NGQLG G A
Sbjct: 318 WGFG-----SSTPVQVQELD-SVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTA 371
Query: 163 KVIPIPTKVECLSG 176
++ PI KV+ G
Sbjct: 372 RLTPI--KVQGFGG 383
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A + PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A + PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 130/290 (44%), Gaps = 16/290 (5%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A++ GG H + L+ G VY+ G D G+LG + Y L L E+V I+ G HH
Sbjct: 18 AVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHH 77
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT G LY WGK G+LG G ++ P VE L A G Q++ V
Sbjct: 78 SAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCV 135
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T V SWG G G+LG G S P I L G+ V G S
Sbjct: 136 TDDDNVWSWGDGDYGKLGRGG---------SDGCKVPLKIDSLAGLGVVKVECGSQFSVA 186
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ +G VY +G ++ +H RRP ++ L + + G H + GE++
Sbjct: 187 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVF 246
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
TWG N+ G LG G+ LH P V + +V+CG HT A S K
Sbjct: 247 TWGDNDEGQLGDGTTSALHRPRLVHA-LQGKKITRVACGSAHTLAWSTAK 295
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 38 WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 97
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 98 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 156 -GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 212
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 213 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 265
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 266 RPRLVHALQGKKITRVACGSAHT 288
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG G K + P +E
Sbjct: 6 LESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLIE 61
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L G+ A G S A+T G + +WG G GRLGHG S + P+++
Sbjct: 62 DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---------SDDQLRPKVV 112
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ L+ KV A +G + C+ ++ V+ +GD K+ + + P I L
Sbjct: 113 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 172
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+V CG + LT G +YTWG + LG G+ D + P +V + ++
Sbjct: 173 GVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAA-LQGKKIISIAT 231
Query: 349 GWKHTAAISE-GKILTWG 365
G H A S+ G++ TWG
Sbjct: 232 GSLHCVACSDKGEVFTWG 249
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V GG H L+S G +Y+WG ++G LG G+ P+ ++ VD ++CG H
Sbjct: 19 VSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVD-IACGGHH 77
Query: 353 TAAI-SEGKILTWGWG 367
+AAI S G + TWG G
Sbjct: 78 SAAITSAGWLYTWGKG 93
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G+ + RP + A + + +ACG AHTL ++T +
Sbjct: 248 WGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL-------AWSTAKATQSR 300
Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+ S + Y L + L S L+ +V + HH + + L M+ G +GL K A
Sbjct: 301 MPASTPMEYDLVKDLSYSVLRNRLVLL----HHFAELLCPA-LAMF--PITGHIGLSKLA 353
Query: 162 AKVI 165
++
Sbjct: 354 PMLV 357
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 110/212 (51%), Gaps = 16/212 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LG+G P F +H + A+ACG +T+ G V A G ND GQL
Sbjct: 197 GCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQL 256
Query: 104 GISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ L P R++ L + VV Q+S GYHH++ +T DG +Y +G+N GQLGLG K
Sbjct: 257 GLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKL 316
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P VE LS + Q A G ++A++ GKV + GR HGQ LG
Sbjct: 317 HMARPTP--VESLSRMRITQVACGCYHTLALSDDGKVFPF-----GRNNHGQ----LGLE 365
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
S +P+LI L K AAGF HS C+
Sbjct: 366 TSMDCLSPQLISTLRN---KPVAAGFYHSVCL 394
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 151/352 (42%), Gaps = 49/352 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
+G YG L LG R P + K +ACG T L E G V+ G ND
Sbjct: 35 FGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCGYND 94
Query: 100 FGQ--LGISENIGYSLEPLRIS-GLKK-EVVQISTGY--HHSSAITVDGELYMWGKNSNG 153
GQ +G +E + LR S GL V++ +G H +A+ +G LY G N G
Sbjct: 95 SGQCAIGTTERV----PSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRG 150
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLG A + T VE L+G A + + V G + + G G+LG G
Sbjct: 151 QLGLG--TATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGD 208
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------D 264
S L PR + V A G ++ +G V FG D
Sbjct: 209 HSGHL---------VPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLD 259
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCL 320
R + +L P+ ++ P VV CG +HT ++T G +YT+G N+ G L
Sbjct: 260 RVSEPVLL--------PTRLAP-PLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQL 310
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
G+G + P V+ S + QV+CG HT A+S +GK+ +G +HG
Sbjct: 311 GLGHKLHMARPTPVES-LSRMRITQVACGCYHTLALSDDGKVFPFGR-NNHG 360
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 25/321 (7%)
Query: 44 GNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLN 98
G D G+ +G+ E R+ P + S H+++ + G+ H L G +Y G N
Sbjct: 91 GYNDSGQCAIGTTERVPSLRFSPGLSS---HHTVRLFSGNGSEHLAALCANGFLYTVGFN 147
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+ + L K VV ++ Y H++ + +G+L+ G N GQLG+G
Sbjct: 148 MRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMG 207
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ ++P P + A G +VA G V+++G G+LG + S +
Sbjct: 208 DHSGHLVPRPVDYFFRHPVLA--VACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPV 265
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L T RL L+ V + G+ H+A + E+G VY FG ++ H
Sbjct: 266 --LLPT-----RLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHM 318
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPERVQ 335
RP+ + L +V CG YHT L+ G+++ +G N +G LG+ S+D L SP+ +
Sbjct: 319 ARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMDCL-SPQLIS 377
Query: 336 GPFSESPVDQVSCGWKHTAAI 356
P V+ G+ H+ +
Sbjct: 378 T-LRNKP---VAAGFYHSVCL 394
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 20/284 (7%)
Query: 29 RWISSTLQRRFAALWGNGDY--------GRLGLGSLESRWRPVVCSAFEKHSLKALACGG 80
R S AAL NG G+LGLG+ + + + +AC
Sbjct: 122 RLFSGNGSEHLAALCANGFLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSY 181
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
HT + + G ++A G ND+GQLG+ ++ G+ + + V+ ++ G H++ A
Sbjct: 182 FHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLR 241
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG + +GKN +GQLGL + + V+ +PT++ L Q + G+ + VT G V
Sbjct: 242 DGGVVAFGKNDHGQLGLDRVSEPVL-LPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVY 300
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G+LG G + L R P ++ L +++ A G H+ + ++G+V
Sbjct: 301 TFGRNDYGQLGLGHK---LHMAR------PTPVESLSRMRITQVACGCYHTLALSDDGKV 351
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
+ FG ++ + P LIS L ++ V G YH+ L
Sbjct: 352 FPFGRNNHGQLGLETSMDCLSPQLISTL-RNKPVAAGFYHSVCL 394
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRIS----GLKKEVVQISTGYHHSSAITVDGELYMW 147
+++ G N +G+L + + S P R+ K VV ++ G ++ + +G+++
Sbjct: 32 LFSFGQNTYGELALGDTNDRS-TPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTC 90
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGG 205
G N +GQ +G + +P LS T + + G E A+ G + + G
Sbjct: 91 GYNDSGQCAIG--TTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNM 148
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-- 263
G+LG G +++ +E T L++EL G +V A + H+A + +NG ++ G
Sbjct: 149 RGQLGLGTATTV-------TEAT--LVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCN 199
Query: 264 DRAVDKMLFQEGNHARRP-SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
D M G+ RP + P V CG ++T G + +G N++G LG+
Sbjct: 200 DYGQLGMGDHSGHLVPRPVDYFFRHPVLA-VACGQHYTVASLRDGGVVAFGKNDHGQLGL 258
Query: 323 GSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ + + P R+ P + V Q+SCG+ HTA ++E G + T+G
Sbjct: 259 DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFG 303
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 166/334 (49%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG ++ P +++ ++ HTL +T G V++ G D+
Sbjct: 426 GKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDY 485
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG N P I G L K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 486 GKLG-HGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHS 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSI 217
++ +PT V+ +SG+ Q A G ++AV G+++ S+G G +G+LGHG + +
Sbjct: 545 DSHSRN--VPTLVKDISGV--GQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L G ++ AG S + G+V+ +G + E
Sbjct: 601 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 650
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERV 334
+ RP LI +L ++ ++ CG H L+ E++ WG+N G G G + P++V
Sbjct: 651 SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKV 710
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q++ G H TA ++ +++ W
Sbjct: 711 IG-LEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 743
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 157/335 (46%), Gaps = 31/335 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+LE +P + F + + G T ++ G V A G +G
Sbjct: 374 VWGSNSSHQLAEGTLEKILQPKLAQGFSDAQM--IEAGQYCTFSVSADGAVKACGKGSYG 431
Query: 102 QLGISENIGYS------LEPLRISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQ 154
+LG+ ++ S LEP R ++K V S G H+ A+T +GE++ WG G+
Sbjct: 432 RLGLGDSNNQSMPKKLVLEPPRT--MRK--VSSSKGSDGHTLAVTAEGEVFSWGDGDYGK 487
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A + P + L + +A G+ S AVT G++ +WG G GRLGH
Sbjct: 488 LGHGNSATQKYPKIIQGPLLGKVVVCVSA-GYRHSAAVTNDGELYTWGEGDFGRLGHSD- 545
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
S S P L+K++ GV A G H+ + ++GR V+ FG K+
Sbjct: 546 --------SHSRNVPTLVKDISGVGQ--VACGSSHTIAVAQDGRIVWSFGGGDNGKLGHG 595
Query: 274 EGNHARRPSLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ N RP +I L + VC G + + LTS G+++ WG CLG GS +
Sbjct: 596 DTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC--GSCLGCGSSETTSLR 653
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
R+ S + + +SCG H A+S E ++ WG
Sbjct: 654 PRLIEELSITKIIDISCGDSHCLALSHENEVFAWG 688
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 147/338 (43%), Gaps = 53/338 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWGNG +G+L S P + + + + + CG T + G V A G +G
Sbjct: 3864 LWGNGRHGQLADAG-TSASVPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGSYG 3920
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGY---HHSSAITVDGELYMWGKNSNGQLGL 157
+LG N P IS L+ VV Q+ T Y HS A+T GE++ WG G+LG
Sbjct: 3921 RLG-QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGH 3979
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q A GF+ S VT GK+ ++G+G SGRLG
Sbjct: 3980 GNSERQR--RPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQ------ 4031
Query: 218 LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV---DKMLFQ 273
RSTS + P + L+G + G R + D ML
Sbjct: 4032 ----RSTSNKMIPERVTALDG----------------------HHIGQRLIGLPDAML-- 4063
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
NH RP +I L + E++ G H L++ G++Y WG N LG+G + + P
Sbjct: 4064 -KNH-NRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEP 4121
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
V + Q+S G H++A + + T G S
Sbjct: 4122 ILVTT-LQGKNIRQISAGRCHSSAWTTPALSTRASGCS 4158
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 20/291 (6%)
Query: 87 TETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+T VY G N QL G E I L+P G + I G + + +++ DG +
Sbjct: 367 NDTVMVYVWGSNSSHQLAEGTLEKI---LQPKLAQGFS-DAQMIEAGQYCTFSVSADGAV 422
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGA 203
GK S G+LGLG + +P +E + ++ G + ++AVT G+V SWG
Sbjct: 423 KACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGD 482
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G G+LGHG S ++ P++I+ L G V +AG+ HSA + +G +Y +
Sbjct: 483 GDYGKLGHGN---------SATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTW 533
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL-YTWGSNENGCLG 321
G+ ++ + + P+L+ + +V CG HT + G + +++G +NG LG
Sbjct: 534 GEGDFGRLGHSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG 593
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
G + ++ P+ ++ + +V G + + A+ S G++ WG G G
Sbjct: 594 HGDTNRVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 643
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + ++ G H+ +T G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLG 158
+LG S++ ++ L ISG V Q++ G H+ A+ DG + + +G NG+LG G
Sbjct: 540 RLGHSDSHSRNVPTLVKDISG----VGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHG 595
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 596 D--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS---- 647
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PRLI+EL K+ + G H + V+ +G+ A+
Sbjct: 648 ----ETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAM 692
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG +GQL +A V PT LS T+Q G + V G VL+ G
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASV---PTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVG 3915
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRV 259
G GRLG G + YTP +I L+G V + HS + E G V
Sbjct: 3916 EGSYGRLGQGNSDDL---------YTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEV 3966
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ RRP I L EEVV CG H+ V+T+ G+L+T+GS +
Sbjct: 3967 FSWGDGDYGKLGHGNSERQRRPKQIEGL-QGEEVVQLACGFKHSAVVTADGKLFTFGSGD 4025
Query: 317 NGCLGIGSIDVLHSPERV 334
+G LG S PERV
Sbjct: 4026 SGRLGQRSTSNKMIPERV 4043
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 584 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 643
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P I L +++ IS G H A++ + E++ WG N+ GQ G G +
Sbjct: 644 CGSSETT--SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTS 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
V P KV L G+ +Q G S+ AV ++++W L E S
Sbjct: 702 TPVTK-PKKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDL----EESTF 756
Query: 219 GFLRSTSE 226
+LRS E
Sbjct: 757 TYLRSFLE 764
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G +V WG G G+L TS P L L + + G + +
Sbjct: 3858 GKSEVYLWGNGRHGQLADA----------GTSASVPTLAPSLS--QTQQVVCGQNCTFLV 3905
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGY----HTCVLTSGGE 308
NG V G+ + ++ + P++IS L Y + Y H+ LT GE
Sbjct: 3906 QANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGE 3965
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
+++WG + G LG G+ + P++++G E V Q++CG+KH+A ++ +GK+ T+G G
Sbjct: 3966 VFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEE-VVQLACGFKHSAVVTADGKLFTFGSG 4024
Query: 368 GS 369
S
Sbjct: 4025 DS 4026
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 156/341 (45%), Gaps = 50/341 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG H+ +T +G +Y G ++
Sbjct: 333 WGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNY 392
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 393 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 451
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +AA G + AV + +WG G
Sbjct: 452 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDK 509
Query: 207 GRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLGH +E+ ++ + +E+ V A G + + +GRVY G
Sbjct: 510 GRLGHVDKEAKLVPTCVALAEHN-----------VCQVACGHSLTVALTTSGRVYTMGS- 557
Query: 266 AVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 558 ---PVYGQLGN----PQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKG 610
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D ++P V+ + V ++CG TAAI
Sbjct: 611 ANGRLGHGDTDDRNTPTLVEA-LKDKDVKSIACGTTFTAAI 650
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 35/317 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G V++ G G+L G+ ++ L P I L ++ ++
Sbjct: 311 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIEALSNTNIELVA 367
Query: 130 TGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +HS A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 368 CGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHW--VPKRVNGPLEGIHVSYISCGP 425
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 426 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAACG 476
Query: 247 FLHSACIDE--NGRVYIFGDRAVDKMLFQEGNHARR----------PSLISKLPYSE-EV 293
H+A + E G +VD + +G+ R P+ ++ ++ +V
Sbjct: 477 VWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQV 536
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G +YT GS G LG D P V+G SES V++++CG H
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADG-KLPILVEGKLSESFVEEIACGAYHV 595
Query: 354 AAI-SEGKILTWGWGGS 369
A + S ++ TWG G +
Sbjct: 596 AVLTSRTEVYTWGKGAN 612
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 27/232 (11%)
Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++++WG+ + N ++G LG K + P +E + + A G +
Sbjct: 266 GDVFIWGEGTGDGVLGGGNHRVGSCLGAKMDSLFP--KALESAVVLDVQNIACGGRHAAL 323
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G+V SWG GRLGHG +S +L P+LI+ L +++ A G HS
Sbjct: 324 VTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHSC 374
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
+ +G +Y +G+ + L GN P ++ + + + CG +HT V+TS
Sbjct: 375 AVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 434
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
G+L+T+G G LG G + P V+ V + +CG HTAA+ E
Sbjct: 435 GQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTV-RAACGVWHTAAVVE 485
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V+ A G H+A + + G V+ +G+ + ++ + P LI L
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALS 359
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+ E V CG YH+C +T G+LYTWG+ G LG G+ P+RV GP V
Sbjct: 360 NTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 419
Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G GTF GH
Sbjct: 420 YISCGPWHTAVVTSAGQLFTFG----DGTFGALGH 450
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 173/356 (48%), Gaps = 28/356 (7%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVTNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ + P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFETSD----PKVIENIRDQTISYISCGESHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVL-HSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+T G +YT+G +G LG+G + H + FS V V+CG H +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVFA 365
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 149/306 (48%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G T+ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIG---------LKNVTNVCVPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A + PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + + P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 18/283 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
G H L +T G VY+ G N+ GQLG+ S + SL L + LK V+ S YHHS
Sbjct: 144 GAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSL--LLVESLKHVRVLSASCSYHHSV 201
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
++ DG + +G N GQLG+G + +++P +VE S + AA G ++ +T G
Sbjct: 202 VVSSDGSAFSFGLNDCGQLGIGTRPNQLLP--HRVELPSPHLVRLAACGQYHTIFLTEEG 259
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V S G +G+LG G SS P LI L+ + A G+ H+ + E+
Sbjct: 260 MVFSCGKNLNGQLGLGSRSST---------NVPTLIAALQERPASMIACGYSHTCVVLED 310
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
G+++ FG ++ + P + L + ++ CG + TCVL+ GEL+++G
Sbjct: 311 GKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGC 370
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
N +G LG+G P V ++ + +++CG+ H AIS
Sbjct: 371 NCHGQLGLGDSTDRLVPVLVPS-MTKKNLSEIACGFHHLVAIS 412
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 155/339 (45%), Gaps = 28/339 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G G LG + + + + + + +A G + FLTE G VY GLN GQ
Sbjct: 45 CGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQ 104
Query: 103 LGISENIG-------YSLEPLRISGLKKE--VVQIS--TGYHHSSAITVDGELYMWGKNS 151
L + G YS + + GL + VVQ+S G H +T G++Y G N+
Sbjct: 105 LARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNN 164
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+GQLGLG + K+ P VE L + A+ + SV V+ G S+G G+LG
Sbjct: 165 HGQLGLG--STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGI 222
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + L P ++ V++AA G H+ + E G V+ G ++
Sbjct: 223 GTRPNQL---------LPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLG 273
Query: 272 FQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P+LI+ L P S + CG HTCV+ G+L+T+G N G LG+G D +
Sbjct: 274 LGSRSSTNVPTLIAALQERPASM-IACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSV 332
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
SP +V+ V ++SCG T +SE L W +G
Sbjct: 333 SSPMQVE-TLRNVKVVKISCGTHFTCVLSESGEL-WSFG 369
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LG+G+ ++ P H ++ ACG HT+FLTE G V++ G N GQ
Sbjct: 212 FGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQ 271
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ ++ L + ++ I+ GY H+ + DG+L+ +G N GQLGLG +
Sbjct: 272 LGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS 331
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + + + G + ++ G++ S+G G+LG G
Sbjct: 332 --VSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGD--------- 380
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
ST P L+ + + A GF H I
Sbjct: 381 STDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG +S P+ + ++CG T L+E+G +++ G N GQ
Sbjct: 316 FGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQ 375
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
LG+ ++ + L S KK + +I+ G+HH AI+
Sbjct: 376 LGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 28/289 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
GN YG LG G S P A S+K A G G H L LTE G VY+ G ND+ +
Sbjct: 52 GNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111
Query: 103 LGISENIGYSLEPLRI-SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P I S L E VV I+ G HHS A+T GE+Y WG N +GQ+G G
Sbjct: 112 LG-NRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTI 170
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V PIP + L+G + G SVAVT G+V SWG G G+LG G
Sbjct: 171 LSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIG------- 223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TS+ P+ + + ++ G++H+ + + G +Y++G + ++ ++
Sbjct: 224 --NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVW 281
Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
P +KL E ++ YH + ++ G ++ WG CLG
Sbjct: 282 IP---TKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ----CLG 323
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 20/292 (6%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
TL +T+ VY G N +G LG + ++ P +I L K V + G H A+T
Sbjct: 39 TLIVTKDDMVYGIGNNTYGCLGTGDTHS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+G++Y WG N +LG + P IP+ L+ F A G S+A+T G+V
Sbjct: 98 EGKVYSWGYNDYCELGNRSTNEGLTPTLIPS---ALNNEFVVDIACGGHHSLALTNKGEV 154
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
+WG SG++G G + ST + P+L+ L G KV + G S + +NG
Sbjct: 155 YAWGHNVSGQVG-------CGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNG 207
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G V ++ P ++ E+VVCG HT L+ G+LY WG+N
Sbjct: 208 EVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGAN 267
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISEG-KILTWG 365
G LG+ + + P ++Q P +D + + H + A+SEG +I WG
Sbjct: 268 SYGQLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWG 319
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G++G G++ S +P+ + + ++CG + ++ +T+ G VY+ G N
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNG 216
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLGI N EP +++ K V++ + GY H+ A++ +G+LY+WG NS GQLGL
Sbjct: 217 VGQLGIG-NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLN 275
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ IP +V + I + S+A++ G ++ WG
Sbjct: 276 TDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWG 319
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G+ S+ P + F K ++ + CG HTL L++ G +Y G N +GQ
Sbjct: 212 WGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQ 271
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
LG++ + + L++ + + + ++ YHH S A++ ++MWG+ LG+
Sbjct: 272 LGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ------CLGQS 325
Query: 161 AAKVIPIPTKVECL 174
+P T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 22/306 (7%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G + ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
T G+++T+G N G LG P+ V+ E V Q+ CG HT A + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 362 LTWGWG 367
+++G G
Sbjct: 310 VSFGRG 315
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 27/272 (9%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAA 355
L+ G + WGSN G L + + +P + P S V +SCG+KHTA
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTLGVVSISCGYKHTAV 250
Query: 356 IS-EGKILTWGWGGSHGTFSED--GHSSGGQL 384
++ +GK+ T+G S+G D G QL
Sbjct: 251 LTQDGKVFTFG-DNSYGQLGHDPTAEKRGPQL 281
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW--GAGGSGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+ G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 122 bits (305), Expect = 4e-25, Method: Composition-based stats.
Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 29/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YGRLG GS +R PV S + S A++ H++ L G ++ G N+ GQ
Sbjct: 292 WGYNYYGRLGDGSTINRIVPVQVSGLTEVS--AISAAFGHSMALKSDGTLWTWGYNNRGQ 349
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +I SL P+++ V IS GY +S A+ DG ++ WG+N GQ G
Sbjct: 350 LG-NNSITQSLVPVQVL---TGVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTID 405
Query: 163 KVIPIPTKVECLSGI--FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++PI +V L+G+ + ++ + S+A+ G V WG +G+LG+
Sbjct: 406 SLVPI--QVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNS------- 456
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P L GV V I +AG HS + +G +I+G + ++ +
Sbjct: 457 --ATQSLVPVQALGLTGV-VSI-SAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLV 512
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + L + G YH+ L S G ++ WG N +G LG S V P +V
Sbjct: 513 PVQVPGLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLVPIQVL----- 567
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ VS G H+ A+ S+G + WGWG +
Sbjct: 568 TGTTSVSAGTYHSMALKSDGAV--WGWGNN 595
Score = 103 bits (258), Expect = 1e-19, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 140/320 (43%), Gaps = 35/320 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ G H L L G V+A G N +G+LG I + P+++SGL EV IS + HS
Sbjct: 273 VVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTIN-RIVPVQVSGL-TEVSAISAAFGHS 330
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG L+ WG N+ GQLG ++P V+ L+G+ + A G++ S+AV
Sbjct: 331 MALKSDGTLWTWGYNNRGQLGNNSITQSLVP----VQVLTGVASISA--GYDYSLAVKSD 384
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACI 253
G V +WG G+ G+ + P + L GV A + + HS +
Sbjct: 385 GTVWAWGRNYYGQFGNNS---------TIDSLVPIQVSGLTGVTSISATSSNNYSHSLAL 435
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V+ +G + ++ + P L + G H+ L S G + WG
Sbjct: 436 KSDGTVWGWGYNSTGQLGNNSATQSLVPVQALGLTGVVSISAGSNHSMALKSDGTAWIWG 495
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGT 372
N +G LG S P +V G S V +S G H+ A+ S+G + W W
Sbjct: 496 GNSDGQLGNNSTAQSLVPVQVPG---LSGVSAISAGNYHSMALKSDGTV--WAW------ 544
Query: 373 FSEDGHSSGGQLDRGQLTPS 392
G +S GQL T S
Sbjct: 545 ----GRNSSGQLGNNSTTVS 560
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 127/289 (43%), Gaps = 17/289 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG S + PV S + ++ G H++ L G V+A G N GQ
Sbjct: 710 WGDNAYGMLGNNSTVTSSIPVQVSGLT--GVSSVKAGRLHSMALKSDGTVWAWGYNTEGQ 767
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++SGL+ +V+ IS G +HS I DG ++ WG+NSNGQLG
Sbjct: 768 LG-DGSTTQRLVPVQVSGLE-DVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTG 825
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++P+ +V L+G+ A G S AV G L+WG+ G+L G
Sbjct: 826 SLVPV--QVPGLTGVALISA--GTNTSAAVKSDGTALAWGSNTYGQLCDGS--------- 872
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + E GV HS + +G V+ G + ++ P
Sbjct: 873 NIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPV 932
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
L + G YH+ L S G ++ WG N G LG S +P
Sbjct: 933 QTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 47/347 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGG-AHTLFLTETGCVYATGLNDF 100
WG YG+ G S P+ S S+ A + +H+L L G V+ G N
Sbjct: 390 WGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNST 449
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + + SL P++ GL VV IS G +HS A+ DG ++WG NS+GQLG
Sbjct: 450 GQLG-NNSATQSLVPVQALGLTG-VVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNST 507
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++P+ +V LSG+ A G S+A+ G V +WG SG+LG+
Sbjct: 508 AQSLVPV--QVPGLSGVSAISA--GNYHSMALKSDGTVWAWGRNSSGQLGNNS------- 556
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P I+ L G +AG HS + +G V+ +G+ K++
Sbjct: 557 --TTVSLVP--IQVLTGTTS--VSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLV 610
Query: 281 P------SLISK-----LPYSEEVVC------GGY-HTCVLTSGGELYTWGSNENGCLGI 322
P + IS +P S+E+ G Y ++ L S ++ WG +G LG
Sbjct: 611 PVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGN 670
Query: 323 GSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAI-SEGKILTWGWG 367
G+ + + V P + + V+Q+S G H+ A+ S+G W WG
Sbjct: 671 GTGEQM----LVGYPVRDLTGVEQISAGEGHSLALRSDGT--AWAWG 711
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 87/332 (26%), Positives = 144/332 (43%), Gaps = 21/332 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S PV A + +++ G H++ L G + G N GQ
Sbjct: 444 WGYNSTGQLGNNSATQSLVPV--QALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQ 501
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + SL P+++ GL V IS G +HS A+ DG ++ WG+NS+GQLG
Sbjct: 502 LG-NNSTAQSLVPVQVPGLSG-VSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTV 559
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++PI + L+G T + G S+A+ G V WG ++ L ++
Sbjct: 560 SLVPI----QVLTG--TTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVK 613
Query: 223 ST-----SEYTPRLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ S++ + + +K ++G + +S + + V+ +G + G
Sbjct: 614 TAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTG 673
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+ L E++ G H+ L S G + WG N G LG S P +V
Sbjct: 674 EQMLVGYPVRDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVS 733
Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
G + V V G H+ A+ S+G + WG+
Sbjct: 734 G---LTGVSSVKAGRLHSMALKSDGTVWAWGY 762
Score = 76.3 bits (186), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/260 (28%), Positives = 101/260 (38%), Gaps = 55/260 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R PV S E + A++ G H++ + G V+A G N GQ
Sbjct: 760 WGYNTEGQLGDGSTTQRLVPVQVSGLE--DVIAISAGDYHSMVIKSDGTVWAWGRNSNGQ 817
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + G SL P+++ GL V IS G + S+A+ DG WG N+ GQL G
Sbjct: 818 LGNNSTTG-SLVPVQVPGLTG-VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQ 875
Query: 163 KVIPI----PTKVECLSGIFTKQAAL---------------------------------- 184
++IP+ P V LS + +L
Sbjct: 876 RLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTL 935
Query: 185 ----------GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
G S+A+ G + WG G G+LG +S L + S + P
Sbjct: 936 GLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAPVASKRWFFPDDYLN 995
Query: 235 LEGVKVKIAAAGFLHSACID 254
L G A G S ID
Sbjct: 996 LGG---GYEAPGTFESGTID 1012
Score = 71.6 bits (174), Expect = 6e-10, Method: Composition-based stats.
Identities = 83/303 (27%), Positives = 126/303 (41%), Gaps = 43/303 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---------------VCSAFEKHSLKALACGGAH--TLF 85
WGN +Y ++ + + PV V S+ E S+ A + GG++ +L
Sbjct: 592 WGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSI-ATSSGGSYGYSLA 650
Query: 86 LTETGCVYATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
L V+A G G LG +GY + L V QIS G HS A+ D
Sbjct: 651 LKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRDL------TGVEQISAGEGHSLALRSD 704
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G + WG N+ G LG IP+ +V L+G+ + +A G S+A+ G V +W
Sbjct: 705 GTAWAWGDNAYGMLGNNSTVTSSIPV--QVSGLTGVSSVKA--GRLHSMALKSDGTVWAW 760
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG G +T P + LE V + I+A + HS I +G V+
Sbjct: 761 GYNTEGQLGDGS---------TTQRLVPVQVSGLEDV-IAISAGDY-HSMVIKSDGTVWA 809
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+G + ++ + P + L + G + + S G WGSN G L
Sbjct: 810 WGRNSNGQLGNNSTTGSLVPVQVPGLTGVALISAGTNTSAAVKSDGTALAWGSNTYGQLC 869
Query: 322 IGS 324
GS
Sbjct: 870 DGS 872
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ YG+L GS R PV S ++ +H+L L G V+ G ND
Sbjct: 857 ALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRND 916
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G +G + +I S P++ GL VV IS G +HS A+ DG ++ WG N GQLG
Sbjct: 917 YGPIG-NNSITDSKVPVQTLGLAG-VVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNS 974
Query: 160 KAAKVIPIPTK 170
+++ P+ +K
Sbjct: 975 TTSRLAPVASK 985
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 22/306 (7%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G + ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
T G+++T+G N G LG P+ V+ E V Q+ CG HT A + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 362 LTWGWG 367
+++G G
Sbjct: 310 VSFGRG 315
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 27/272 (9%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAA 355
L+ G + WGSN G L + + +P + P S V +SCG+KHTA
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTLGVVSISCGYKHTAV 250
Query: 356 IS-EGKILTWGWGGSHGTFSED--GHSSGGQL 384
++ +GK+ T+G S+G D G QL
Sbjct: 251 LTQDGKVFTFG-DNSYGQLGHDPTAEKRGPQL 281
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW--GAGGSGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+ G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 146/332 (43%), Gaps = 23/332 (6%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
+ R A WG G+LG G+ E R PV S + ALA G +HT L +T V
Sbjct: 492 MNVRTAQCWGRNSSGQLGDGTTERRLTPVTVSGLSAAT--ALAAGDSHTCALLDTRRVRC 549
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+ +SGL ++ G H+ + G + WG NS+GQ
Sbjct: 550 WGRNSSGQLGDGTRTDR-VTPVAVSGLSGATA-LAAGNSHTCTLLDTGTVQCWGWNSSGQ 607
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + +V P V LSG+ A G + A+ G V WG SG+LG G
Sbjct: 608 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTR 663
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
T TP + L GV AAG H+ + ++G V +G + ++
Sbjct: 664 ---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSSGQLGDGT 712
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P+ +S L +V G HTC L G + WG NE G LG G+ +P V
Sbjct: 713 TTDRVTPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAV 772
Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G S + ++ G +HT A+ + G WG
Sbjct: 773 SG---LSGITALAAGSEHTCAVLNTGAARCWG 801
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 128/300 (42%), Gaps = 19/300 (6%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
L R WG G+LG G+ R PV S + ALA G +HT L +TG V
Sbjct: 542 LDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSGAT--ALAAGNSHTCTLLDTGTVQC 599
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P +SGL V ++ G +H+ A+ G + WG+NS+GQ
Sbjct: 600 WGWNSSGQLGDGTRTDR-VTPAAVSGLSG-VTALAAGANHTCALMDSGTVQCWGRNSSGQ 657
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + +V P V LSG+ A G + A+ G V WG SG+LG G
Sbjct: 658 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGT- 712
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T TP + L GV +A A H+ + G V +G ++
Sbjct: 713 --------TTDRVTPAAVSGLSGVTALVAGAN--HTCALMPTGTVQCWGKNEFGQLGDGT 762
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P +S L + G HTC + + G WG N G LGI +D P V
Sbjct: 763 TTDRLTPVAVSGLSGITALAAGSEHTCAVLNTGAARCWGRNLFGRLGISPLDYSPLPRTV 822
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 146/326 (44%), Gaps = 27/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S + ALA G HT L TG V GLN GQ
Sbjct: 100 WGWNGSGQLGDGTTTDRAMPVAVSGLS--GVTALAAGRYHTCALLNTGTVQCWGLNSSGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+ +SGL V+ ++ G H+ A+ + WG+N +GQLG G
Sbjct: 158 LG-DWTITNRVTPVAVSGLSG-VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTND 215
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V LSG+ A G + A G V WG G+G+LG G
Sbjct: 216 RWTPV--AVSGLSGV--TALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTR-------- 263
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TS TP + L G AAGF H+ + + G V +G + ++ +G RR
Sbjct: 264 -TSRLTPMAVSGLSGATAL--AAGFEHTCALLDTGTVRCWGLNSSGQL--GDGTTERRLT 318
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P +S L + G +HTC + + WG N +G LG G+ + +P V G
Sbjct: 319 PVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGS 378
Query: 341 SPVDQVSCGWKHTAAISE-GKILTWG 365
+ ++ G HT A+ + G + WG
Sbjct: 379 T---ALAAGGVHTCALLQTGTVQCWG 401
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 137/311 (44%), Gaps = 23/311 (7%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
R + L R WG ++G+LG G+ RW PV S + ALA GG HT
Sbjct: 185 DRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS--GVTALAAGGRHTCAAL 242
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
TG V G N GQLG L P+ +SGL ++ G+ H+ A+ G + W
Sbjct: 243 NTGTVQCWGGNGAGQLGDGTRTSR-LTPMAVSGLSGATA-LAAGFEHTCALLDTGTVRCW 300
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G NS+GQLG G ++ P+ V LSG+ T AA F + AV V WG SG
Sbjct: 301 GLNSSGQLGDGTTERRLTPV--AVSGLSGV-TALAAGDF-HTCAVLQTETVQCWGLNSSG 356
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G L TP + L G AAG +H+ + + G V +G
Sbjct: 357 QLGDGTTERRL---------TPVSVSGLSGSTAL--AAGGVHTCALLQTGTVQCWGRNEF 405
Query: 268 DKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++ +G RR P ++S L + + G HTC + WG N G LG G+
Sbjct: 406 GQL--GDGTTERRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTT 463
Query: 326 DVLHSPERVQG 336
+ +P V G
Sbjct: 464 ERRLTPVTVSG 474
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 144/320 (45%), Gaps = 26/320 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ +R PV S + ALA G HT L +T V G N+ GQ
Sbjct: 150 WGLNSSGQLGDWTITNRVTPVAVSGLS--GVIALAAGDRHTCALLDTRTVRCWGENEHGQ 207
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+ +SGL V ++ G H+ A G + WG N GQLG G + +
Sbjct: 208 LG-DGTTNDRWTPVAVSGLSG-VTALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTRTS 265
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ V LSG A GFE + A+ G V WG SG+LG G L
Sbjct: 266 RLTPM--AVSGLSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRL---- 317
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TP + L GV AAG H+ + + V +G + ++ +G RR
Sbjct: 318 -----TPVAVSGLSGVTAL--AAGDFHTCAVLQTETVQCWGLNSSGQL--GDGTTERRLT 368
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P +S L S + GG HTC L G + WG NE G LG G+ + +P V G
Sbjct: 369 PVSVSGLSGSTALAAGGVHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSG---L 425
Query: 341 SPVDQVSCGWKHTAAISEGK 360
S ++ G +HT A+ + +
Sbjct: 426 SGATALTAGDRHTCAVLQTR 445
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 161/382 (42%), Gaps = 51/382 (13%)
Query: 15 KQDIKLGSKL--GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
K+ +KL L G+ WI ST G GRL ++ P+ S
Sbjct: 34 KRPVKLDRYLYPGVAHTWIDST-----------GSEGRLMTNPGKAPASPLPLS-----R 77
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ ALA G HT L TG V+ G N GQLG ++ P+ +SGL V ++ G
Sbjct: 78 VIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAM-PVAVSGLSG-VTALAAGR 135
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ A+ G + WG NS+GQLG +V P+ V LSG+ A G + A+
Sbjct: 136 YHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPV--AVSGLSGVIALAA--GDRHTCAL 191
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
V WG G+LG G + +TP + L GV AAG H+
Sbjct: 192 LDTRTVRCWGENEHGQLGDGT---------TNDRWTPVAVSGLSGVTAL--AAGGRHTCA 240
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
G V +G ++ +G R P +S L + + G HTC L G +
Sbjct: 241 ALNTGTVQCWGGNGAGQL--GDGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVR 298
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
WG N +G LG G+ + +P V G S V ++ G HT A+ + + + WG
Sbjct: 299 CWGLNSSGQLGDGTTERRLTPVAVSG---LSGVTALAAGDFHTCAVLQTETVQCWG---- 351
Query: 370 HGTFSEDGHSSGGQLDRGQLTP 391
+ G G +R +LTP
Sbjct: 352 ---LNSSGQLGDGTTER-RLTP 369
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 160/334 (47%), Gaps = 18/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + P I L+ V +QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L V CG + LT+ G ++T G+ G LG G P R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S GK+ +G G S
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGKVYAFGLGSS 332
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P ++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P+LI EL+ + + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A +K + Q R+ L+SK ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G LG+ S + L + P R+ P+ ++CG H+ IS+ G + WG
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAVFGWG 223
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISE--NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+++ N Y L+ LR G++ ++ G S +T +G ++ G + GQL
Sbjct: 227 CGQLGLNDETNRAYPTQLKTLRTLGVRF----VACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQE 214
G G + +++P V L G Q A G ++A V GKV ++G G SG+LG
Sbjct: 283 GHGFSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRST 340
Query: 215 SSIL 218
S++
Sbjct: 341 KSLM 344
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G++Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+ G +S+ GH + R QL P
Sbjct: 61 VYACG----SNDYSQLGHDLPTK--RPQLIP 85
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GNPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGNPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2131
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 172/357 (48%), Gaps = 55/357 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1177 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1236
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQI-----------------------STGYHHSS 136
G+LG N P +I L+ +EVVQ+ S G+ HS+
Sbjct: 1237 GKLG-HGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSA 1295
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVT 193
+T DG+L+ +G G+LGLG + K +P +V L G Q A G ++ V+
Sbjct: 1296 VVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVAALEGYQIGQVANVACGLNHTLVVS 1353
Query: 194 GGGKVL-SWGAGGSGRLGHGQESSILGFLRSTSEY------TPRLIKELE-----GVKVK 241
G ++ ++G G G+LG G ++ +S+ + +P L +EL+ G+ +K
Sbjct: 1354 ADGMMVWAFGDGDYGKLGLGNSTA-----KSSPQVWAVILQSPTLCQELKVDVLCGISIK 1408
Query: 242 IAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
A G S + ++GRV+ FG DR + + NH RP + L + ++V G
Sbjct: 1409 KVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNH-NRPQQLPALSGVHVQDVAVGAE 1467
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
HT L+S G++Y WGSN G LG+G + + P V + QVS G H+AA
Sbjct: 1468 HTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTM-LQGKHIHQVSAGRCHSAA 1523
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 53/306 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----------------------KHSLKALACG 79
WG+GDYG+LG G+ + + RP A + H ++CG
Sbjct: 1231 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCG 1290
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK----KEVVQISTGYHHS 135
H+ +T G ++ G D+G+LG+ L P R++ L+ +V ++ G +H+
Sbjct: 1291 FKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGQVANVACGLNHT 1349
Query: 136 SAITVDGEL-YMWGKNSNGQLGLGKKAAKVIP--------IPT-----KVECLSGIFTKQ 181
++ DG + + +G G+LGLG AK P PT KV+ L GI K+
Sbjct: 1350 LVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKK 1409
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G + SVA+T G+V ++ G RL ES R+ + P+ + L GV V+
Sbjct: 1410 VACGTQFSVALTKDGRVFTF---GQDRLIGLPES------RARNHNRPQQLPALSGVHVQ 1460
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYH 299
A G H+ + G VY +G + ++ NH R P++++ L + +V G H
Sbjct: 1461 DVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIHQVSAGRCH 1520
Query: 300 TCVLTS 305
+ T+
Sbjct: 1521 SAAWTA 1526
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
SGL ++++ +T + ++++WG +GQL +A + I +PT S
Sbjct: 1099 SGLDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTTAPSFSQ-- 1153
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 1154 AQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQGF 1204
Query: 239 KVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 1205 VVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQ 1263
Query: 295 -------------------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
CG H+ V+T+ G+L+T+G+ + G LG+G+
Sbjct: 1264 VGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK 1323
Query: 330 SPERVQGP--FSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
PERV + V V+CG HT +S ++ W +G G +G
Sbjct: 1324 LPERVAALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKL 1370
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 156/337 (46%), Gaps = 36/337 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F+ +++ CG HT +T +G +YA G D
Sbjct: 328 WGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNA 387
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 388 GLLGLGSGASH-WKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHG 446
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T + A G S AV + GK+ +WG G G+LGH
Sbjct: 447 DRIS--TNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGH 504
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
G +S L P + EL+ + A G + + +G+VY G D + D
Sbjct: 505 GDIASRL---------IPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQDD 555
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ R PS I + +EV CG +H VL S E+YTWG NG LG G +
Sbjct: 556 VV-------RAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 608
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
P V+ V +V CG +TA I K +T
Sbjct: 609 YRRMPTLVKA-LKGKQVRKVVCGSNYTATICLHKPIT 644
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 39/326 (11%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P V + ++++CG + + +T+ G +Y+ G G+LG Y P I
Sbjct: 295 PKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGV-CSYVPHPKLIDEF 353
Query: 122 KKEVVQIST-GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+++ G H+ A+T G+LY WG ++ G LGLG A+ P+ + + GI
Sbjct: 354 DGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIN 412
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ + G + VT GK+ ++G G G LGHG S PR ++ L G
Sbjct: 413 VRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGC 463
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ----------EGNHARR--PSLISK 286
+ A G HSA + V +FG+ + LF G+ A R P +++
Sbjct: 464 RTIRTACGVWHSAAV-----VSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTE 518
Query: 287 LPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
L + ++V CG T L+ G++Y G+ + DV+ +P ++G +S V
Sbjct: 519 LDTTSFQQVACGQSITVALSMSGQVYAMGTADPS-----QDDVVRAPSCIEGGLGKSFVQ 573
Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGS 369
+V+CG+ H A + S+ ++ TWG G +
Sbjct: 574 EVACGYHHIAVLNSKAEVYTWGKGSN 599
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 294 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPH------- 346
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
P+LI E +G V++A G H+ + +G +Y +GD + L G+ A +
Sbjct: 347 --PKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 404
Query: 287 LPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
L E + CG +HT +TS G+L+T+G G LG G + P V+ +
Sbjct: 405 LGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEA-LNGC 463
Query: 342 PVDQVSCGWKHTAAI--------SEGKILTWGWG 367
+ +CG H+AA+ S GK+ TWG G
Sbjct: 464 RTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDG 497
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V WG G G LG G S T + P+++K + + + G ++ + +
Sbjct: 263 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 322
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
G++Y +G+ + ++ ++ P LI + S E CG +HTC +T+ G+LY WG
Sbjct: 323 GQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGD 382
Query: 315 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
++ G LG+GS P R+ G V +SCG HTA + S GK+ T+G G
Sbjct: 383 GDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFG----DG 438
Query: 372 TFSEDGH 378
TF GH
Sbjct: 439 TFGALGH 445
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 26/302 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G S
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649
Query: 376 DG 377
+
Sbjct: 650 EA 651
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G G + +++
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 654
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 655 -------RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA++E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 529 DGELYTWG----EGDFGRLGH 545
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 157/336 (46%), Gaps = 27/336 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S+ +LACGGAH + LT G V + G + GQ
Sbjct: 23 WGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQ 82
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + SL P ++ L + +S G+ HS ++ +G ++ G S GQLG G A
Sbjct: 83 LGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHA 142
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ KV C +Q A G S+ + G +V +G+G G+LG +
Sbjct: 143 SHCSPV--KVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R S P+++ EGV++ AA HSA + +G VY +G F+ AR P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRG------FKGFEDARVP 247
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG-IGSID-VLHSP-------E 332
++ +V G H ++ GE+ G N G L + +I H P E
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLE 307
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+V G + + ++ G +H+ ++E G+I TWGWG
Sbjct: 308 KVPG-LDGTKITDIATGAEHSVIVTEHGEIKTWGWG 342
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 56/223 (25%)
Query: 197 KVLSWGAGGSGRLG-------------HGQESSIL------------------------- 218
+V SWGAG G+LG H S +
Sbjct: 19 RVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRG 78
Query: 219 -------GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + S S Y P+ + L+G + +AG+ HS + +NG V+ GD + ++
Sbjct: 79 NSGQLGHGLVVSNSLY-PKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQL- 136
Query: 272 FQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--I 325
G+HA P +S + E+V CG H+ VL G ++Y +GS + G LG+ + +
Sbjct: 137 -GHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRV 195
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
++ P+ V G F + ++ H+AA+S +G + TWG G
Sbjct: 196 KSVNVPKVVSG-FEGVEIAGIAANGDHSAAVSVDGHVYTWGRG 237
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRISGLKK------ 123
+ +A G H L ++ G V G N G L +NI + L LR L+K
Sbjct: 255 NFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPGLDG 314
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ I+TG HS +T GE+ WG +GQLGLG ++ P+
Sbjct: 315 TKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPV 359
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
I D ++L Q PSL S + CGG H LTS G++ +WG +G L
Sbjct: 35 ILQDEHFPQLLHQ-------PSLSSI----SSLACGGAHVIALTSAGKVLSWGRGNSGQL 83
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
G G + + + VS GW H+ +S+ G + T G G+F + GH
Sbjct: 84 GHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCG----DGSFGQLGH 138
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+++WG+ G LG + H P+ + P S S + ++CG H A+ S GK+L+WG G
Sbjct: 20 VWSWGAGTEGQLGTKILQDEHFPQLLHQP-SLSSISSLACGGAHVIALTSAGKVLSWGRG 78
Query: 368 GS 369
S
Sbjct: 79 NS 80
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 166/372 (44%), Gaps = 59/372 (15%)
Query: 43 WGNGDYGRLGLGSLESRW----RPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYA 94
WGN G+LGL P AF S+ A+ACG AHTLFL + G VY+
Sbjct: 88 WGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD-GQVYS 146
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G ND GQLG + + +P R+ L+ + QI+ G HS A+T +G+++ WG N
Sbjct: 147 CGSNDQGQLGHKK---HRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKAS 203
Query: 154 QLGL---------------GKKAAKVIPI-----------------PTKVECLSGIFTKQ 181
QLGL K AA I P V L+G Q
Sbjct: 204 QLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQ 263
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S+ ++ G V +WG SG+L L L++ P L+KEL G+ ++
Sbjct: 264 IVCGANFSLVLSERGDVFAWGDNTSGQL-------CLRELKTVP--VPTLVKELYGIPIR 314
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
AAG H+ + NG+VY +G+ ++ + PS + L + + CG H
Sbjct: 315 QLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDH 374
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--S 357
+ VLT G +Y++G+ G LG G++ +P + +S QV CG +HT
Sbjct: 375 SVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKS-ASQVLCGRRHTIVFFPK 433
Query: 358 EGKILTWGWGGS 369
KI +G GG+
Sbjct: 434 TNKIYAFGLGGN 445
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 48/328 (14%)
Query: 90 GCVYATGLNDFGQLGISENIGYSL---EPLRISGLKKEVVQ-----ISTGYHHSSAITVD 141
G V+A G GQLG+ ++L EP + + I+ G H+ VD
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHT-LFLVD 141
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G++Y G N GQLG K +K P +V+ L Q A G S+A+T G+V +W
Sbjct: 142 GQVYSCGSNDQGQLGHKKHRSK----PERVDALEPYTITQIACGETHSLALTSNGQVFAW 197
Query: 202 GAGGSGRLG-HGQESSILGFLRSTSEYT------------------------PRLIKELE 236
G + +LG ESS RS++ T PRL++ L
Sbjct: 198 GDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALT 257
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEV 293
G K+ G S + E G V+ +GD ++ +E P+L+ +L P ++
Sbjct: 258 GHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPI-RQL 316
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
GG HT LT G++Y+WG+N+ G LG+G P R++ ++CG H+
Sbjct: 317 AAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKT-LEHQFCAHIACGEDHS 375
Query: 354 AAISE-GKILTWGWGGS----HGTFSED 376
++E G + ++G GG HGT +
Sbjct: 376 VVLTETGGVYSFGAGGQGQLGHGTLQNE 403
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 26 ICKRWISSTLQRR---FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH 82
+C S L R FA WG+ G+L L L++ P + ++ LA GG H
Sbjct: 265 VCGANFSLVLSERGDVFA--WGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRH 322
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVD 141
TL LT G VY+ G N FGQLG+ + +++ P R+ L+ + I+ G HS +T
Sbjct: 323 TLALTFNGQVYSWGNNQFGQLGVGDTAPHTI-PSRLKTLEHQFCAHIACGEDHSVVLTET 381
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLS 200
G +Y +G GQLG G ++ P + L G Q G ++ K+ +
Sbjct: 382 GGVYSFGAGGQGQLGHGTLQNEI--NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYA 439
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+G GG+G+LG G +G TP L++ L+ + A G S C
Sbjct: 440 FGLGGNGQLGTG-----VGVEPQQHVLTPMLVRVLDATPILRIATGASASHCF 487
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 147/305 (48%), Gaps = 22/305 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G ++ GN + +P I L + CG HT VLT G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
+T+G N +G L P+ ++G V Q+ C HT A + G++++ G G
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314
Query: 368 GSHGT 372
SH +
Sbjct: 315 PSHTS 319
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 136/275 (49%), Gaps = 25/275 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
+ G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGWKHTAA 355
H+ L+ G + WGSN +G L + V ++ P + G V +SCG++HTA
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAV 249
Query: 356 IS-EGKILTWGWGGSHGTFSEDGHS--SGGQLDRG 387
++ EG++ T+G G S G S G QL G
Sbjct: 250 LTEEGQVFTFG-GNSSGQLQPSPRSGQRGPQLIEG 283
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
+ + V CG H+ + G+++ WG+ G LGIG ++ P +++ + +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130
Query: 345 QVSCGWKHTAAISE-GKILTWG 365
QVSCG H+ A+SE G + +WG
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWG 152
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG R S P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
L + V + + G HS + G+V+ +G + ++ F+E + P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSC 348
+V CG YH+ L+ G +++WG N G LG+G + P++V+ P+ QV+
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAA 187
Query: 349 GWKHTAAISEGKILTWGWGGS 369
G H+ A+S ++GWG +
Sbjct: 188 GGTHSFALSLTGT-SFGWGSN 207
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 154/337 (45%), Gaps = 37/337 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 320 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 379
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T +G+L+ +G + G LG G
Sbjct: 380 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 438
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 439 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 496
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
G L P + EL+ + A G + + +G+VY G D + D
Sbjct: 497 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 547
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ R PS I + +EV CG +H VL S E+YTWG NG LG G +
Sbjct: 548 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 599
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
P V+ V +V CG +TA I K +T
Sbjct: 600 YRCMPTLVKA-LKGKQVRKVVCGSNYTATICLHKPIT 635
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 40/314 (12%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
++++CG + + +T+ G +Y+ G G+LG Y P I V+++ G
Sbjct: 299 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEFNGSTVELADCGE 357
Query: 133 HHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H+ A+T G+LY WG ++ G LGLG A+ P+ + + GI+ K + G +
Sbjct: 358 FHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIYVKAISCGPWHTA 416
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
VT GK+ ++G G G LGHG S PR ++ L G + AA G HS
Sbjct: 417 FVTSEGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGCRTIKAACGVWHS 467
Query: 251 ACIDENGRVYIFGDRAVDKMLFQ--EGNHARR----------PSLISKLPYS--EEVVCG 296
A + V +FG+ LF +G+ R PS +++L + ++V CG
Sbjct: 468 AAV-----VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACG 522
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
T L+ G++Y G+ + S D++ +P ++G +S V +V+CG+ H A +
Sbjct: 523 QSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVL 576
Query: 357 -SEGKILTWGWGGS 369
S+ ++ TWG G +
Sbjct: 577 NSKAEVYTWGKGSN 590
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 286 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 338
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
P+LI E G V++A G H+ + +G +Y +GD + L G +H + +
Sbjct: 339 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 396
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ ++ Y + + CG +HT +TS G+L+T+G G LG G + P V+ +
Sbjct: 397 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA-LNGC 455
Query: 342 PVDQVSCGWKHTAAI--------SEGKILTWGWG 367
+ +CG H+AA+ S GK+ TWG G
Sbjct: 456 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDG 489
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 139/320 (43%), Gaps = 19/320 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G LG G+ R PV ++ A+A G HTL LT TG + A G N FG+
Sbjct: 111 WGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGE 170
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + EP+ ++ + I+ G HS A+T G + WGKN+ GQLG G A
Sbjct: 171 LGDGTTTARN-EPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA 229
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V+ G A G S A+T G VL+WG SG++G G
Sbjct: 230 NSTTPV--DVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGT-------- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP + G V A G HS + G V +G + ++ + P
Sbjct: 280 -TTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTP 338
Query: 282 SLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ LP + G H+ LTS G + WG N +G LG G+ +P V P
Sbjct: 339 VDV-NLPPDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRSTPVDVNLP 397
Query: 338 FSESPVDQVSCGWKHTAAIS 357
+ V + G H+ A++
Sbjct: 398 PGTT-VTAIDNGDDHSMALT 416
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 144/333 (43%), Gaps = 20/333 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ PV ++ A+A A++ LT TG V A G N G+
Sbjct: 59 WGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNNTGGE 118
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P+ + V I+ G H+ A+T G L WG N G+LG G
Sbjct: 119 LGDGTNTDRT-TPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGELGDGTTT 177
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A+ P+P V G A G S+A+T G VL+WG G+LG G +
Sbjct: 178 ARNEPVPVNVPA--GTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA------ 229
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP + G V A G +S + G V +G + ++ +G R
Sbjct: 230 ---NSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQV--GDGTTTDRS 284
Query: 282 SLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ + LP V + GG H+ LTS G + WG N +G LG G+ +P V P
Sbjct: 285 TPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVNLP 344
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ + H+ A+ S G IL WG S
Sbjct: 345 PDTTITAITAHDGSHSLALTSTGTILAWGLNSS 377
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 20/329 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P FE S+ A G HTLFLT+ G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P +SGL ++ ++ G HS A++ GE++ WG ++ GQLG +
Sbjct: 64 GQLGHDQP---RKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG-HQ 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q A G SVA+T G++ WGA G+LG G
Sbjct: 120 LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGT------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ E TP + L G+ + A G H+ + ++G V+ +G ++ + +
Sbjct: 174 --ITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKK 231
Query: 280 RPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L S + CG + LT G +++ G+ G LG G P +V
Sbjct: 232 FPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVLE- 290
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTW 364
S + Q+SCG +H+ A S G++ ++
Sbjct: 291 LMGSTITQISCGRQHSLAFVPSRGRVYSY 319
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 15/226 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + + P ++ +AALG ++ +T GKV S G+
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH Q P+L+ L+ + A G +HS + G V+ +G
Sbjct: 61 NDYGQLGHDQPRK-----------RPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWG 109
Query: 264 DRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ Q G + P LI L + ++ G H+ LT+ GE++ WG+N+ G L
Sbjct: 110 SDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQL 169
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G+G+I S S P ++CG HT A+S+ G + WG
Sbjct: 170 GLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWG 215
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 42 LWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG D+G+LGLG++ P + +ACG HT ++++G V+ G N
Sbjct: 160 VWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNIN 219
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ + P ++ L+ V+ IS G S+ +T+DG ++ G GQLG G
Sbjct: 220 GQLGLNDTVSKKF-PTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGG 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
+ ++ +P +V L G Q + G + S+A V G+V S+
Sbjct: 279 TSNEI--LPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 154/337 (45%), Gaps = 37/337 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 323 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 382
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T +G+L+ +G + G LG G
Sbjct: 383 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 442 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 499
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
G L P + EL+ + A G + + +G+VY G D + D
Sbjct: 500 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 550
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ R PS I + +EV CG +H VL S E+YTWG NG LG G +
Sbjct: 551 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 602
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
P V+ V +V CG +TA I K +T
Sbjct: 603 YRCMPTLVKA-LKGKQVRKVVCGSNYTATICLHKPIT 638
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 40/314 (12%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
++++CG + + +T+ G +Y+ G G+LG Y P I V+++ G
Sbjct: 302 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEFNGSTVELADCGE 360
Query: 133 HHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H+ A+T G+LY WG ++ G LGLG A+ P+ + + GI+ K + G +
Sbjct: 361 FHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIYVKAISCGPWHTA 419
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
VT GK+ ++G G G LGHG S PR ++ L G + AA G HS
Sbjct: 420 FVTSEGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGCRTIKAACGVWHS 470
Query: 251 ACIDENGRVYIFGDRAVDKMLFQ--EGNHARR----------PSLISKLPYS--EEVVCG 296
A + V +FG+ LF +G+ R PS +++L + ++V CG
Sbjct: 471 AAV-----VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACG 525
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
T L+ G++Y G+ + S D++ +P ++G +S V +V+CG+ H A +
Sbjct: 526 QSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVL 579
Query: 357 -SEGKILTWGWGGS 369
S+ ++ TWG G +
Sbjct: 580 NSKAEVYTWGKGSN 593
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 289 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 341
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
P+LI E G V++A G H+ + +G +Y +GD + L G +H + +
Sbjct: 342 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 399
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ ++ Y + + CG +HT +TS G+L+T+G G LG G + P V+ +
Sbjct: 400 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA-LNGC 458
Query: 342 PVDQVSCGWKHTAAI--------SEGKILTWGWG 367
+ +CG H+AA+ S GK+ TWG G
Sbjct: 459 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDG 492
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 19/296 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ D+G+LG G++ SR PV S +++A+ G AH++ + G V+ G NDFG
Sbjct: 584 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 641
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P+++SGL V ++ G +HS A+ DG L+ WG N+ GQLG G
Sbjct: 642 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 699
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L+G+ A G S+A+ G V WGA G+LG G +
Sbjct: 700 --IQSTPAQVPGLTGVIALAAGNG--HSLALRTDGTVWGWGANSFGQLGDGTTTP----- 750
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
RST P L V AG ++ + V+ +G ++ ++ P
Sbjct: 751 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 804
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+S L + G H L + ++ WG N+ G +G G+ ++ +P V P
Sbjct: 805 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 860
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 154/339 (45%), Gaps = 36/339 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
WG+ YG+LG G+ R PV + ALA GG AH+L L G V+A
Sbjct: 218 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 275
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL V ++ G HS A+ DG ++ WG NS+GQ
Sbjct: 276 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
LG G A+ P P +V L+ + A +LG + S+A+ G V +WG S
Sbjct: 334 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+ G G + + TP + EL G + AG LH+ + +G V+ +GD +
Sbjct: 392 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 440
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
++ +P +S L + G H+ + S G ++ WG N G LGIG
Sbjct: 441 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 500
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
P + G S + ++ G H+ A+ G + TWG
Sbjct: 501 REIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTWG 536
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 150/327 (45%), Gaps = 27/327 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G G +R PV S E AL G H + L G V+A G N GQ
Sbjct: 385 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 442
Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +P+++SGL + ++TG HS A+ DG ++ WG N GQLG+G A
Sbjct: 443 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 499
Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ T + +S + A G S+A+ G G V +WG+ G+LG G
Sbjct: 500 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 549
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+T+ P L + AAG HS + +G V+++G ++ +
Sbjct: 550 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 603
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P +S L V G H+ + G ++ WG+N+ G LG G++ P +V G
Sbjct: 604 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---L 660
Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWG 367
+ V V+ G H+ A+ L W WG
Sbjct: 661 TGVTAVAVGVYHSLALRNDGTL-WAWG 686
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 158/349 (45%), Gaps = 35/349 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G +R PV + S+ ALA G +H+L L G V+ G N +GQ
Sbjct: 485 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 542
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + ++ GL ++ ++ G HHS A+ DG +++WG N GQLG G +
Sbjct: 543 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 600
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + +A G SVAV G V WG G+LG G
Sbjct: 601 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 648
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS P + L GV A G HS + +G ++ +G V ++ P+
Sbjct: 649 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 705
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + G H+ L + G ++ WG+N G LG G+ +P +V G +
Sbjct: 706 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG---LTN 762
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
V ++ G +T A+ SE + W G S GQL G +T
Sbjct: 763 VIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVT 799
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 153/342 (44%), Gaps = 42/342 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S+ A+A AH+L L G V+A G N +GQ
Sbjct: 168 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 225
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
LG P+++ GL V ++ G + HS A+ DG ++ WG NS GQ
Sbjct: 226 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 283
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P V+ L A G S+A+ G V +WG SG+LG G
Sbjct: 284 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 338
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
+T+ TP + L V + +AA G HS + +G V+ +G
Sbjct: 339 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 389
Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ F +G A R P +S+L +V G H VL S G ++ WG N +G LG G
Sbjct: 390 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 447
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V P +V G + + ++ G H+ A+ S+G I WG
Sbjct: 448 TPVRAKPMQVSG---LAAITALATGDGHSVAVGSDGGIWAWG 486
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S+ ALA G H+L L + G V+A G N GQ
Sbjct: 276 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
LG P+++ GL V+ ++ G HS A+ DG ++ WG N +
Sbjct: 334 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
Q G G A + P+ +V L+G A G +V + G V +WG SG+LG G
Sbjct: 392 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 446
Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
TP K ++ G+ A A G HS + +G ++ +GD ++
Sbjct: 447 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 493
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P + L + G H+ L G ++TWGSN G LG G+ +
Sbjct: 494 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRAT 553
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+V G + + ++ G H+ A+ ++G + WG
Sbjct: 554 AAQVPG---LTDITALAAGNHHSLALRNDGTVWVWG 586
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 19/296 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ D+G+LG G++ SR PV S +++A+ G AH++ + G V+ G NDFG
Sbjct: 583 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 640
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P+++SGL V ++ G +HS A+ DG L+ WG N+ GQLG G
Sbjct: 641 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 698
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L+G+ A G S+A+ G V WGA G+LG G +
Sbjct: 699 --IQSTPAQVPGLTGVIALAAGNG--HSLALRTDGTVWGWGANSFGQLGDGTTTP----- 749
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
RST P L V AG ++ + V+ +G ++ ++ P
Sbjct: 750 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 803
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+S L + G H L + ++ WG N+ G +G G+ ++ +P V P
Sbjct: 804 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 859
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 154/339 (45%), Gaps = 36/339 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
WG+ YG+LG G+ R PV + ALA GG AH+L L G V+A
Sbjct: 217 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 274
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL V ++ G HS A+ DG ++ WG NS+GQ
Sbjct: 275 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
LG G A+ P P +V L+ + A +LG + S+A+ G V +WG S
Sbjct: 333 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+ G G + + TP + EL G + AG LH+ + +G V+ +GD +
Sbjct: 391 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 439
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
++ +P +S L + G H+ + S G ++ WG N G LGIG
Sbjct: 440 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 499
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
P + G S + ++ G H+ A+ G + TWG
Sbjct: 500 REIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTWG 535
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 150/327 (45%), Gaps = 27/327 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G G +R PV S E AL G H + L G V+A G N GQ
Sbjct: 384 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 441
Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +P+++SGL + ++TG HS A+ DG ++ WG N GQLG+G A
Sbjct: 442 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 498
Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ T + +S + A G S+A+ G G V +WG+ G+LG G
Sbjct: 499 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 548
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+T+ P L + AAG HS + +G V+++G ++ +
Sbjct: 549 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 602
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P +S L V G H+ + G ++ WG+N+ G LG G++ P +V G
Sbjct: 603 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---L 659
Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWG 367
+ V V+ G H+ A+ L W WG
Sbjct: 660 TGVTAVAVGVYHSLALRNDGTL-WAWG 685
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 158/349 (45%), Gaps = 35/349 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G +R PV + S+ ALA G +H+L L G V+ G N +GQ
Sbjct: 484 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 541
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + ++ GL ++ ++ G HHS A+ DG +++WG N GQLG G +
Sbjct: 542 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 599
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + +A G SVAV G V WG G+LG G
Sbjct: 600 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 647
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS P + L GV A G HS + +G ++ +G V ++ P+
Sbjct: 648 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 704
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + G H+ L + G ++ WG+N G LG G+ +P +V G +
Sbjct: 705 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG---LTN 761
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
V ++ G +T A+ SE + W G S GQL G +T
Sbjct: 762 VIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVT 798
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 153/342 (44%), Gaps = 42/342 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S+ A+A AH+L L G V+A G N +GQ
Sbjct: 167 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
LG P+++ GL V ++ G + HS A+ DG ++ WG NS GQ
Sbjct: 225 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 282
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P V+ L A G S+A+ G V +WG SG+LG G
Sbjct: 283 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 337
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
+T+ TP + L V + +AA G HS + +G V+ +G
Sbjct: 338 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 388
Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ F +G A R P +S+L +V G H VL S G ++ WG N +G LG G
Sbjct: 389 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 446
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V P +V G + + ++ G H+ A+ S+G I WG
Sbjct: 447 TPVRAKPMQVSG---LAAITALATGDGHSVAVGSDGGIWAWG 485
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 38/336 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S+ ALA G H+L L + G V+A G N GQ
Sbjct: 275 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
LG P+++ GL V+ ++ G HS A+ DG ++ WG N +
Sbjct: 333 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
Q G G A + P+ +V L+G A G +V + G V +WG SG+LG G
Sbjct: 391 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 445
Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
TP K ++ G+ A A G HS + +G ++ +GD ++
Sbjct: 446 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 492
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P + L + G H+ L G ++TWGSN G LG G+ +
Sbjct: 493 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRAT 552
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+V G + + ++ G H+ A+ ++G + WG
Sbjct: 553 AAQVPG---LTDITALAAGNHHSLALRNDGTVWVWG 585
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 22/306 (7%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNNAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
T G+++T+G N G LG P+ V+ E V Q+ CG HT A + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309
Query: 362 LTWGWG 367
+++G G
Sbjct: 310 VSFGRG 315
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 133/272 (48%), Gaps = 27/272 (9%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLHVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAA 355
L+ G + WGSN G L + + +P + P S V +SCG+KHTA
Sbjct: 194 FALSLSGTSFGWGSNNAGQLALSGNN---APVQRYKPVSIGALKTLGVVSISCGYKHTAV 250
Query: 356 IS-EGKILTWGWGGSHGTFSED--GHSSGGQL 384
++ +GK+ T+G S+G D G QL
Sbjct: 251 LTQDGKVFTFG-DNSYGQLGHDPTAEKRGPQL 281
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N+ G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG-----SGRLGHG 212
A K P VE + G+ + Q G + ++A + G+V+S+G G S G
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAL 328
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
ESS + L S K+L V+VK AG
Sbjct: 329 AESSDISCLVSA--------KDLADVQVKHIFAG 354
>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
Length = 508
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 43/332 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+ +LG G+ E+R PV + +KA+A GG +L L + G V++ G ND+ Q
Sbjct: 202 WGRNDWAQLGDGTKETRHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQ 261
Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
LG + G++ P+++ GL V + G HS A+ DG ++ WG GQLG G
Sbjct: 262 LGAGD-TGFNAHTIPVKVEGLSG-VTAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTN 319
Query: 160 ---KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
AA V+P LSG+ K + G+ S+A+ G V SWG G+LG G
Sbjct: 320 SDHNAAAVVP------GLSGV--KAVSAGYRHSLALLRDGTVWSWGYNAQGQLGDGT--- 368
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLH----SACIDENGRVYIFGDRAVDKM 270
+T+ TP + L G IAA + H S + E+G V+ +G D
Sbjct: 369 ------NTNRNTPVKVASLGGRVKAIAASSSNVFHDPSFSLALLEDGTVWSWGTN--DWH 420
Query: 271 LFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+G + R P +S L + + GG H+ L G ++ WG+N++G +G G
Sbjct: 421 QLGDGTNTSRNTPVKVSDLSGVKAIAPGGRHSLALLKDGTVWGWGANDHGQVGTGD---- 476
Query: 329 HSPERVQGPFSESPVDQVSC----GWKHTAAI 356
+P+R P + V GW AA+
Sbjct: 477 GTPDRYAAPVKIEGISHVKAIAAGGWHSIAAL 508
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 167/386 (43%), Gaps = 50/386 (12%)
Query: 16 QDIKLGSKLGI-CKRWISSTLQRRFAA-----------------LWGNGDYGRLGLGSLE 57
QD GS +W+S T FA +WG D+G LG G+ +
Sbjct: 105 QDTSTGSTWVFPAGQWLSDTATHTFAGELLGSGEVVAPTLWQGWVWGQNDHGELGDGTNK 164
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEP 115
R+ P ++ + A+ GG +L L G V++ G ND+ QL G E ++
Sbjct: 165 RRFAPSPMPYLDQVGVSAIDGGGWFSLALLNDGSVWSWGRNDWAQLGDGTKETRHAPVDV 224
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+ ++ + V I+ G S A+ DG ++ WG N QLG G IP KVE LS
Sbjct: 225 MHLA--RFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQLGAGDTGFNAHTIPVKVEGLS 282
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G+ +G S+A+ G V SWG G G+LG G S ++ L
Sbjct: 283 GV--TAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTNS---------DHNAAAVVPGL 331
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-------- 287
GVK +AG+ HS + +G V+ +G A ++ + P ++ L
Sbjct: 332 SGVKA--VSAGYRHSLALLRDGTVWSWGYNAQGQLGDGTNTNRNTPVKVASLGGRVKAIA 389
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
S V + L G +++WG+N+ LG G+ ++P +V S V ++
Sbjct: 390 ASSSNVFHDPSFSLALLEDGTVWSWGTNDWHQLGDGTNTSRNTPVKVS---DLSGVKAIA 446
Query: 348 CGWKHT-AAISEGKILTWGWGGS-HG 371
G +H+ A + +G + WGWG + HG
Sbjct: 447 PGGRHSLALLKDGTV--WGWGANDHG 470
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 144/274 (52%), Gaps = 9/274 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ +G+LG ++ + +P A E + ++CG H+L + G V+A G GQ
Sbjct: 47 YGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQ 106
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI E +L P +I L +++Q+S G+HHS A++ DG L+ WG NS+GQLGLGK+
Sbjct: 107 LGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKEC 166
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P +V+ L GI Q A G S A++ G WG+ G+L +++ + +
Sbjct: 167 PSQAS-PQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKN--VPVV 223
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+S+ P + LE + V + G+ H+A + + G+V+ FG + ++ + P
Sbjct: 224 QSSK---PCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGP 280
Query: 282 SLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + ++ CG YHT + + G++ ++G
Sbjct: 281 QLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 27/307 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G +++ G N GQLG ++ +P RI L+ V +S G
Sbjct: 25 LRQAASGERHSLLLLSNGELHSYGDNSHGQLG-RRDVQRQEQPKRIPALETLRVDLVSCG 83
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ IP K++ L+ I Q + G S+A
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G++ +WG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECP--------SQASPQRVQFLDGIPLTQVAAGGAHSF 194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCV 302
+ +G + +G + ++ ++ N P + S P S + + CG HT V
Sbjct: 195 ALSLSGASFGWGSNSEGQLALRKKN---VPVVQSSKPCSVDALENLGVVYISCGYEHTAV 251
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 360
LT G+++T+G N G LG P+ V+G + V Q+ CG HT A + GK
Sbjct: 252 LTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGK 309
Query: 361 ILTWGWG 367
++++G G
Sbjct: 310 VVSFGRG 316
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 140/274 (51%), Gaps = 22/274 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +GEL+ +G NS+GQ LG++ + P ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQPKRIPALETLRVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ + I PR IK L +K+
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEI--------NLIPRKIKTLTDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + E+GR++ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLT-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAI 356
+ L+ G + WGSN G L + ++ V+ S + E+ V +SCG++HTA +
Sbjct: 193 SFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVL 252
Query: 357 SE-GKILTWGWGGSHGT--FSEDGHSSGGQLDRG 387
++ GK+ T+G G S+G +S G QL G
Sbjct: 253 TQTGKVFTFG-GNSYGQLGYSPTAGKEGPQLVEG 285
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G +++ AA+G HS + NG ++ +GD + ++ ++ +P I L + V
Sbjct: 22 GAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CG H+ + G ++ WG+ G LGIG + ++ R ++ + QVSCG H+
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSL 141
Query: 355 AISE-GKILTWGWGGSHG 371
A+SE G++ TWG SHG
Sbjct: 142 ALSEDGRLFTWG-SNSHG 158
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 159/334 (47%), Gaps = 18/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L V CG + LT+ G ++T G+ G LG G P R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ +G G S
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSS 332
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 29/255 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L++K ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG--GS 369
G LG+ S + L + P R+ P+ ++CG H+ IS+ G + WG G
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229
Query: 370 HGTFSEDGHSSGGQL 384
G E S QL
Sbjct: 230 LGLNDETNRSYPTQL 244
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+++ S P ++ L+ V+ ++ G S +T +G ++ G + GQLG G
Sbjct: 227 CGQLGLNDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P V L G Q A G ++A V G+V ++G G SG+LG S+
Sbjct: 286 FSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343
Query: 218 L 218
+
Sbjct: 344 M 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 361 ILTWGWGGSHGTFSEDGHS 379
+ G +S+ GH
Sbjct: 61 VYACG----SNDYSQLGHD 75
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 162/346 (46%), Gaps = 34/346 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ +R PV+ H + + G ++ L + G V+ G N+ GQ
Sbjct: 57 WGYGDRGQLGDGTWNTRTTPVMAKNL-NHVID-IHSGVRSSMALRQDGTVWTWGANENGQ 114
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI I P ++ GL + IS G +H A++ +G ++ WGKN NG+LG G
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTT 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V LS + T AA G+ S+A+ G V +WG GSG LG G
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T + P + L V AAG HS I ++G V+ +G+ + H RP
Sbjct: 221 -TTERHVPVQVAGL--TDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRP 277
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ L + V GGYH+ + G +++WG N LG+ S P V G
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTGI---E 334
Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRG 387
V ++S G H+ A+ + + WGW G++SGGQL G
Sbjct: 335 HVREISAGGFHSVAMKKDGTV-WGW----------GYNSGGQLGDG 369
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 20/285 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
WG + G+LG+G++ + P +KA++ G A H + L+E G V+ G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + P+ ++GL +V I+ G ++S A+ DG ++ WG N +G+LG G
Sbjct: 165 ELGNGTTTQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ +V L+ + A G S+A+ G V +WG G LG G
Sbjct: 223 ERHVPV--QVAGLTDVMA--IAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTR------- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T P ++ L+ + V +A G+ HS +D+ G V+ +GD + ++ + P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIP 327
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + + E+ GG+H+ + G ++ WG N G LG G+ +
Sbjct: 328 VPVTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYN 372
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ GY+H++++ GE+Y WG GQLG G + P+ K L+ + + G
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G V +WGA +G+LG G +++ P + L G+K I+
Sbjct: 93 RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
H + ENG V+ +G ++ P L++ L + GGY++ L S
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
G ++ WG N +G LG G+ H P +V G + V ++ G H+ AI + + W W
Sbjct: 203 GTVWAWGVNGSGELGDGTTTERHVPVQVAG---LTDVMAIAAGGSHSLAIRQDGTV-WAW 258
Query: 367 G-GSHGTFSE 375
G ++GT +
Sbjct: 259 GNNTYGTLGD 268
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 19/233 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G+ R PV + + A+A GG+H+L + + G V+A G N +G
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGLTD--VMAIAAGGSHSLAIRQDGTVWAWGNNTYGT 265
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ L + +V ++ G +HS A+ G ++ WG NS QLGL A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNAS 323
Query: 163 KVIPIP-TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+IP+P T +E + I +A GF SVA+ G V WG G+LG G ++ G
Sbjct: 324 SLIPVPVTGIEHVREI----SAGGF-HSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGI- 377
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
P L K + +G L+ I + V + +A D M Q
Sbjct: 378 -------PTLTKAVLDTTSPDTGSGSLNPHSITSD-SVALEWPKASDNMTEQH 422
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 147/305 (48%), Gaps = 22/305 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G ++ GN + +P I L + CG HT VLT G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
+T+G N +G L P+ ++G V Q+ C HT A + G++++ G G
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314
Query: 368 GSHGT 372
SH +
Sbjct: 315 PSHTS 319
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 136/275 (49%), Gaps = 25/275 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
+ G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGWKHTAA 355
H+ L+ G + WGSN +G L + V ++ P + G V +SCG++HTA
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAV 249
Query: 356 IS-EGKILTWGWGGSHGTFSEDGHS--SGGQLDRG 387
++ EG++ T+G G S G S G QL G
Sbjct: 250 LTEEGQVFTFG-GNSSGQLQPSPRSGQRGPQLIEG 283
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
+ + V CG H+ + G+++ WG+ G LGIG ++ P +++ + +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130
Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
QVSCG H+ A+SE G + +WG +G G+ R Q P +
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNS-------EGQLGLGKNSRSQAIPQK 173
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG R S P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
L + V + + G HS + G+V+ +G + ++ F+E + P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSC 348
+V CG YH+ L+ G +++WG N G LG+G + P++V+ P+ QV+
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAA 187
Query: 349 GWKHTAAISEGKILTWGWGGS 369
G H+ A+S ++GWG +
Sbjct: 188 GGTHSFALSLTGT-SFGWGSN 207
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 4 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQL 63
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 64 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 122
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 123 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 176
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 177 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 236
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 237 LIEGIGGRVSQIECASYHTIAYVYTTG 263
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 22/287 (7%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
Y+ G N +GQLG + P I L V +S G HS A+ G+++ WG S
Sbjct: 1 YSCGDNSWGQLGQRRDQSTE-RPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGS 59
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG+G+ ++ +PTK++ L+GI Q + G S+A++ G V SWG G+LG
Sbjct: 60 EGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G+ S S+ P+ +K LEG+ + AAG HS + G + +G ++
Sbjct: 119 GKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLA 170
Query: 272 FQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
GN + +P I L + CG HT VLT G+++T+G N +G L
Sbjct: 171 L-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPR 229
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWGGSH 370
P+ ++G V Q+ C HT A + G++++ G G SH
Sbjct: 230 SGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRGPSH 274
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 55 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 114
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 115 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 175 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 234
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 235 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 159/334 (47%), Gaps = 18/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L V CG + LT+ G ++T G+ G LG G P R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ +G G S
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSS 332
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 29/255 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L++K ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG--GS 369
G LG+ S + L + P R+ P+ ++CG H+ IS+ G + WG G
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229
Query: 370 HGTFSEDGHSSGGQL 384
G E S QL
Sbjct: 230 LGLNDETNRSYPTQL 244
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+++ S P ++ L+ V+ ++ G S +T +G ++ G + GQLG G
Sbjct: 227 CGQLGLNDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P V L G Q A G ++A V G+V ++G G SG+LG S+
Sbjct: 286 FSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343
Query: 218 L 218
+
Sbjct: 344 M 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 361 ILTWGWGGSHGTFSEDGHS 379
+ G +S+ GH
Sbjct: 61 VYACG----SNDYSQLGHD 75
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 157/336 (46%), Gaps = 22/336 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG +E P ++K +ACG HTLFLT +G VYA G ND
Sbjct: 10 WGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L VVQI+ G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEV-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ V A G HS I ++ V+ +G ++ +
Sbjct: 184 ----THSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRS 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCL--GIGSIDVLHSPERVQ 335
P+ + L V CG + LT+ G ++T G+ G L G G+ ++L R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEML---PRMV 296
Query: 336 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ +G G S
Sbjct: 297 MELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 332
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T ELY WG S+GQLGLG + I P++V KQ A G ++ +T G+
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V + G+ +LGH + P LI EL V A G HS + E G
Sbjct: 61 VYACGSNDHSQLGHDLPTK-----------RPLLIPELLDYVVVQIACGSRHSMALSEWG 109
Query: 258 RVYIFGD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+V +GD +A D+ + Q R+ L+SK ++ CG H+ LTS GELY
Sbjct: 110 QVLSWGDNDCGQLGQATDQDIVQLPKIVRQ--LVSKTVV--QIACGNNHSLALTSCGELY 165
Query: 311 TWGSNENGCLGIGSI-DVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGKILTWGWG- 367
+WGSN G LG+ + +V HS + V+ PV ++CG H+ IS+ + +GWG
Sbjct: 166 SWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV-FGWGR 224
Query: 368 ---GSHGTFSEDGHSSGGQL 384
G G E S QL
Sbjct: 225 NNCGQLGLNDETSRSYPTQL 244
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL SR P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG L + + + + Q++ G H+ A+ G +Y +G S+GQ LG ++
Sbjct: 282 LGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGTRS 339
Query: 162 AKVIPIPTKV 171
K + +P V
Sbjct: 340 TKSLTLPQVV 349
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 156/326 (47%), Gaps = 24/326 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +YG+ PV E ++ A+A G +L + G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LGI + S P+++ GLK +VV +S G +HS A+ DG ++ WG N +G+LG
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P +V+ LS + A GF S+A+ G V WG G + G S
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P I+ L KV AAG+ HS + ++G V+++G + + G H+ P
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLP 335
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSE 340
+ L V G H+ LT G ++ WG+N G LG + L+ P +V+
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL--- 392
Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWG 365
V ++ G HT AI +G + +WG
Sbjct: 393 DNVVAIAAGGSHTLAIKRDGTVWSWG 418
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 169/371 (45%), Gaps = 63/371 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG LG E + PV + ++ A+A G H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLPVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372
Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG EN +SL P ++ L VV I+ G H+ AI DG ++ WG N+ GQLG G
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTY 430
Query: 161 AAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWG--------------- 202
+ IP C+ G+ +A L G + S+AV G V WG
Sbjct: 431 KSSYIP-----TCVKGL--NKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDIL 483
Query: 203 ----------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELE 236
AGG + G G + F S+ +LI+ L+
Sbjct: 484 SPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LD 542
Query: 237 GVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
+K V+ AAG+ HS + +G V+ +GD +D + N + +P I L +V
Sbjct: 543 NIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKE-KYLNFSEKPVKIKGLSGVVKVAA 601
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G YH+ L G +++WG N G LG G+ + P RV+G + V ++ G H+ A
Sbjct: 602 GKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL---NNVVAIAAGDYHSMA 658
Query: 356 I-SEGKILTWG 365
+ +G + WG
Sbjct: 659 LKKDGTVWVWG 669
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 160/330 (48%), Gaps = 29/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ + PV + + A++ G H+L L + G V+ G ++GQ
Sbjct: 66 WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
++ P+++ L K +V I+ G+ S A+ DG ++ WG N++G+LG+G +
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P KV+ L + A G S+A+ G V SWG G LG+ R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227
Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T +YT P +K L V + I+A GF HS ++++G V+I+G ++K + +++
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P I L + G H+ L G ++ WG N G LG + P +V+G
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGL-- 341
Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
V V+ G H+ A+++ + W WG +
Sbjct: 342 -KNVVAVAAGRLHSVALTKNGTI-WAWGNN 369
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 155/383 (40%), Gaps = 89/383 (23%)
Query: 43 WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +G+LG + S P + ++ A+A GG+HTL + G V++ G N+ G
Sbjct: 366 WGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIAAGGSHTLAIKRDGTVWSWGANNKG 423
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--------KNSNG 153
QLG + S P + GL K V+ + G HS A+ DG +++WG KN+
Sbjct: 424 QLG-NGTYKSSYIPTCVKGLNKAVL-VEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKD 481
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L P+P K+ L+ I + A G + + + G + WG G
Sbjct: 482 ILS---------PLPIKIGKLNDI--TEIAGGLDYILVLRKDGNI--WGCG--------N 520
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDK--- 269
+ F S+ +LI+ L+ +K V+ AAG+ HS + +G V+ +GD +D
Sbjct: 521 DFYFRKFTDSSVSSVTKLIR-LDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEK 579
Query: 270 -MLFQE-----------------------------------------GNHARR----PSL 283
+ F E GN R P
Sbjct: 580 YLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVR 639
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
+ L + G YH+ L G ++ WGSN G LG +I+ P +V+ V
Sbjct: 640 VKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVE---KLDNV 696
Query: 344 DQVSCGWKHTAAI-SEGKILTWG 365
++ G H+ A+ +G + WG
Sbjct: 697 VAIAAGDTHSVALKKDGTVWVWG 719
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 25/206 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+++++A G H+L + G V++ G D + + +S +P++I GL VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKEKYLNFSEKPVKIKGLSG-VVKVAAG 602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+HS A+ DG ++ WG N+ GQLG G + +P+ +V+ L+ + A G S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
+ G V WG+ G+LG R E++ P +++L+ V V I AAG H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705
Query: 250 SACIDENGRVYIFG---DRAVDKMLF 272
S + ++G V+++G DR + K +
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEIL 731
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ G +V+ G H+ AI DG ++ WG N GQLG G IP+ +V+ L
Sbjct: 36 ELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKD 93
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G S+A+ G V W G +GQ S R + TP +KEL+
Sbjct: 94 VVAVSA--GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELK 142
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
+ V I AAG+ S + +G V+ +G ++ + P + L V G
Sbjct: 143 NI-VAI-AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAG 200
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHTA 354
YH+ L G +++WG NE+G LG + + P RV+G S V +S G H+
Sbjct: 201 LYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGL---SDVIAISAGGFHSI 257
Query: 355 AIS-EGKILTWG 365
A++ +G + WG
Sbjct: 258 ALNKDGAVWIWG 269
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ E+ + PV +++ A+A G H++ L + G V+ G N GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG NI +S PL++ L VV I+ G HS A+ DG +++WG + L ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733
Query: 163 KVIPIPTK 170
IP+ K
Sbjct: 734 SSIPVQIK 741
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 33/345 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + + A E + ++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L +VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + I IP + C S + +Q A G SV +T G V SWG
Sbjct: 130 KDDTGRPLRRDIVIPQR--CASKLVVRQVAAGGTHSVVLTREGHVWSWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S P ++ LE +V++ A G H+ + E+G ++ +G+ ++
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--RVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
+ +P + L ++ GG+H+ LT GE+Y WG E+G LG G D
Sbjct: 233 DTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 292
Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P+RV E V QVSCG H+ A++ +G++ T+G G HG
Sbjct: 293 VPQRVNLLVGEDIV-QVSCGGTHSVALTRDGRMYTFG-RGDHGRL 335
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 127/300 (42%), Gaps = 27/300 (9%)
Query: 92 VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
V A G + GQLGI N I +LEP ++ + G +S AI DG+L
Sbjct: 7 VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVR-------SVVAGSRNSLAICDDGKL 59
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG K IP++V+ L+ + QAA+G +AV G+ +WG
Sbjct: 60 FTWGWNQRGTLGH-PPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 205 GSGRLGHGQE--SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+ G E LR R +L V+ AAG HS + G V+ +
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASKL---VVRQVAAGGTHSVVLTREGHVWSW 175
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
G + Q P + L + G +H L G L+ WG+NE G LG
Sbjct: 176 GQPWPPGDIKQ----ISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGT 231
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHSS 380
G P VQG + VD + GW TA +G++ WG G HG F ++ SS
Sbjct: 232 GDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG-RGEHGRLGFGDNDKSS 290
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E+ ++ +A G H L L E G ++A G N++GQLG + S +P+ + GL
Sbjct: 190 PVRVQGLER--VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPITVQGL 246
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T DGE+Y WG+ +G+LG G +P +V L G
Sbjct: 247 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIV 306
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ ++G G GRLG+G++
Sbjct: 307 QVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRK 340
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ +L +A GG H+ LT+ G VY G + G+
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P R++ L +++VQ+S G HS A+T DG +Y +G+ +G+LG G+K
Sbjct: 281 LGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRK 340
Query: 161 AAKVIPIPTKVE 172
P+ ++
Sbjct: 341 VTTGQPMEVPID 352
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 19/301 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DYG+LG + RP V +A + S++ ++CG H L + + V++ G +D GQL
Sbjct: 59 GSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQL 116
Query: 104 GISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + G S P + L ++VQ++ G HS A++ DG ++ WG NS+GQLG+G
Sbjct: 117 GHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIG-- 174
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ K P P ++ L+GI Q G S ++ G V +G G+LG G
Sbjct: 175 STKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD------- 227
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P +K L +KV + G H+A + +G V FG + ++ NH
Sbjct: 228 --TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL 285
Query: 281 PSLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + +L E ++ CG HT + S G +Y++G NG LG ++P V GP
Sbjct: 286 PRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGP 345
Query: 338 F 338
F
Sbjct: 346 F 346
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 164/338 (48%), Gaps = 27/338 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-----HSLKALACGGAHTLFLTETGCVYATGL 97
WG G LGLG +E V+ + E+ +++ ++CG HT+F+ G VY G
Sbjct: 4 WGAARNGELGLGGIEED---VILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
ND+GQLG ++ G+ P I+ L + + Q+S G +H+ + +++ WG + GQLG
Sbjct: 61 NDYGQLG--QDKGHK-RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117
Query: 157 LGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+A P V+ LS + Q A G + S+A++ G++ SWG G+LG G
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-- 175
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ ++ P+ + L G+ AG HS + ++G V+ FG ++ +
Sbjct: 176 -------TKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDT 228
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ P+ + L + + CG HT VLT G + T+G+ G LG S + P +
Sbjct: 229 GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRK 288
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE--GKILTWGWGGS 369
V V Q++CG HT A E G+I ++G GG+
Sbjct: 289 V-FELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGN 325
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 5/170 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +G+LG+GS +++ +P ++ + GG+H+ L+++G V+ G N FGQ
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQ 222
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + G P + L+ +V IS G H++ +T+DG + +G S GQLG
Sbjct: 223 LGLGDT-GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG 210
+ +P KV L G+ Q A G ++A V G++ S+G GG+G+LG
Sbjct: 282 HEA--LPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG NG+LGLG VI P + + ++ + G + +V V G V + G+
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + G R P +I L+ ++ + G H+ +++ +V+ +G
Sbjct: 61 NDYGQLGQDK-----GHKR------PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109
Query: 264 DRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
++ L GN++RRP ++ +L + +V CGG H+ L++ G +++WG+N +G
Sbjct: 110 YDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHG 169
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LGIGS P+ + + P Q+ G H+ +S+ G + +G
Sbjct: 170 QLGIGSTKNQPKPQELTS-LTGIPFCQIVAGGSHSFVLSKSGAVFGFG 216
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 120 bits (302), Expect = 8e-25, Method: Composition-based stats.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 31/253 (12%)
Query: 90 GCVYATGLNDFGQLG---------ISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAIT 139
G +++ G N GQ+G +S+ I + P I LK +V ++ GY HS AIT
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNF-PKLIVPLKDTIVTSVACGYQHSVAIT 1558
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G + WG NS+ QLGLG+K+ +P PT + L+ I + + G E ++A+ G+V
Sbjct: 1559 YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNI--QSVSCGSEHTLALDYIGQVF 1616
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G LGHG E +P++I+ L+G+ V G LHS + +N +V
Sbjct: 1617 SWGNGEGGLLGHGNEDVCP---------SPKIIEALKGLNVDFIVCGGLHSLVLTKNRQV 1667
Query: 260 YIFGDR-----AVDKMLF-QEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELY 310
Y +G +DK LF E + P + ++ G H+ L G++Y
Sbjct: 1668 YSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVY 1727
Query: 311 TWGSNENGCLGIG 323
WG N NG +G+G
Sbjct: 1728 GWGYNMNGQIGLG 1740
Score = 90.1 bits (222), Expect = 2e-15, Method: Composition-based stats.
Identities = 94/329 (28%), Positives = 144/329 (43%), Gaps = 30/329 (9%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTG 131
+ ++ACG H++ +T G V A G N QLG+ E S+ P I L + +S G
Sbjct: 1544 VTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTN-IQSVSCG 1602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H+ A+ G+++ WG G LG G + V P P +E L G+ G S+
Sbjct: 1603 SEHTLALDYIGQVFSWGNGEGGLLGHGNE--DVCPSPKIIEALKGLNVDFIVCGGLHSLV 1660
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIK-ELEGVKVKIAAAGFL 248
+T +V SWG G+LG ++ + Y TP+ +K LEGV V AAG
Sbjct: 1661 LTKNRQVYSWGRNEGGQLGIDKK-----LFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEA 1715
Query: 249 HSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH-TCVLT 304
HS + NG+VY +G + + + + P LI KL E++ C G + + L
Sbjct: 1716 HSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLG 1775
Query: 305 SGGELYTWGSNENGCLG-------IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
E S N L ++ + P+++ F + PV VSCG H+ A+
Sbjct: 1776 LEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDC-FHQIPVLHVSCGHNHSLALV 1834
Query: 357 --SEGKILTWGWG-GSHGTF--SEDGHSS 380
+ + WG HG E G +S
Sbjct: 1835 VADTKHYMLFAWGMHKHGQLGIGETGQNS 1863
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 91/335 (27%), Positives = 145/335 (43%), Gaps = 29/335 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + +LGLG P ++++++CG HTL L G V++ G + G
Sbjct: 1566 WGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGL 1625
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N P I LK V I G HS +T + ++Y WG+N GQLG+ KK
Sbjct: 1626 LG-HGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKL 1684
Query: 162 AK----VIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +V+ L G+ Q A G S+A+ G+V WG +G++G G ++
Sbjct: 1685 FTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTD 1744
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DENGRVYIFGDRAVDKMLFQ 273
+ Y P+LI +L ++ KI G S + E ++ + +D+ Q
Sbjct: 1745 ------TYPVYEPQLIPKLNKIE-KIFCCGLNDSNQLGLEKEPIKITSTTNNILDQYKPQ 1797
Query: 274 EGNHARRPSLISK-------LPYSEEVVCGGYHTCVL----TSGGELYTWGSNENGCLGI 322
+ A I K +P V CG H+ L T L+ WG +++G LGI
Sbjct: 1798 DQKRAVTDVFIPKKMDCFHQIPVL-HVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGI 1856
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
G S R + ++CG H+ ++
Sbjct: 1857 GETGQNSSVPRPITYLQDVTTYSMACGSYHSLVVA 1891
Score = 75.5 bits (184), Expect = 5e-11, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 4/178 (2%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G + SWG G++G+ + + P+LI L+ V A G+ HS I
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITY 1559
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP--SLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
G V +GD + ++ E + + P + I L + V CG HT L G++++WG
Sbjct: 1560 AGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWG 1619
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
+ E G LG G+ DV SP+ ++ VD + CG H+ +++ + + + WG + G
Sbjct: 1620 NGEGGLLGHGNEDVCPSPKIIEA-LKGLNVDFIVCGGLHSLVLTKNRQV-YSWGRNEG 1675
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ +G +G+LG + +LG
Sbjct: 176 NVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ--LLGN 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
R TP+L+ E+ +++A G H+ + EN VY FG + LF+
Sbjct: 232 HR-----TPQLVSEIPEKVIQVACGG-EHTVVLTENA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +I + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+YT+G + G LG+G+ S +V + + +SCG HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 129/249 (51%), Gaps = 24/249 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
+T+ GELY +G ENG LG+ + L R SE P V QV+CG +HT ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260
Query: 359 GKILTWGWG 367
+ T+G G
Sbjct: 261 NAVYTFGLG 269
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 170/343 (49%), Gaps = 45/343 (13%)
Query: 44 GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLN 98
G G YGRLGLG + +S + +V +++ ++ HTL LT GC+++ G
Sbjct: 340 GKGSYGRLGLGDSNNQSTLKTIVFDP--PQTIRKISSSKGSDGHTLALTTEGCIFSWGDG 397
Query: 99 DFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
D+G+LG ++ + P I G ++ VV +S GY HS+ +T +G+L+ WG+ G+LG
Sbjct: 398 DYGKLGHGSSLTHK-SPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLG 456
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQES 215
LG ++ +P+ K +G G ++ + G V S+GAG +G+LGHG S
Sbjct: 457 LGDNTSRNVPVLVKDIASAG----SVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTS 512
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV------DK 269
+ Y P++I+ + G+ AG +S ++++G+V+ +G A D
Sbjct: 513 RV---------YRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDA 563
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID- 326
+P+LI +L ++ ++ G H LT E+Y WG+N G G+G +
Sbjct: 564 TFM-------KPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNS 616
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKH----TAAISEGKILTWG 365
+ P +VQ + + Q+S G H TA S+ +++W
Sbjct: 617 PISVPTQVQQ-LNNVTIHQISAGTSHSIAYTAMPSDRHVISWS 658
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 92/236 (38%), Gaps = 58/236 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---------- 92
WG GDYGRLGLG SR PV+ S ++ CG +HTL L + G
Sbjct: 447 WGEGDYGRLGLGDNTSRNVPVLVKDIA--SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNG 504
Query: 93 --------------------------------YATGLNDFGQ---------LGISENIGY 111
Y+ LND GQ LG
Sbjct: 505 KLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDAT 564
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++P I L VV I++G H A+T + E+Y WG N+ GQ GLG + I +PT+
Sbjct: 565 FMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSP-ISVPTQ 623
Query: 171 VECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILGFLRS 223
V+ L+ + Q + G S+A T V+SW L + FL S
Sbjct: 624 VQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPYCVDLSESTFKKMNNFLSS 679
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG GS + P ++ + + ++ G H+ +T+ G ++ G D+G
Sbjct: 394 WGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYG 453
Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMW--GKNSNGQLG 156
+LG+ +N + + L K++ + G H+ + DG L +W G NG+LG
Sbjct: 454 RLGLGDNTSRN-----VPVLVKDIASAGSVVCGSSHTLVLAQDG-LTVWSFGAGDNGKLG 507
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E ++G+ + G + S+A+ G+V SWG G LG G +
Sbjct: 508 HGDTSR--VYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGAC--LGCGSPDA 563
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
F++ P LI EL +V +G H + N VY +G+ A+
Sbjct: 564 --TFMK------PTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAM 606
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 63/314 (20%)
Query: 121 LKKEVVQISTGYHHSSAITV-------DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++VV +S Y S T + ++Y WG NS+ QL + + I P KV+
Sbjct: 256 LMEQVVSLSEEYAISCTETATKSVDMNNCDVYAWGSNSSHQLA--ELGSDKIVFPKKVKS 313
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
++ G + AV+G G V S G G GRLG G +S+ L++ P+ I+
Sbjct: 314 FGN--SQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLG-DSNNQSTLKTIVFDPPQTIR 370
Query: 234 ELEGVK------------------------------------------------VKIAAA 245
++ K V +A
Sbjct: 371 KISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSA 430
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G+ HSAC+ + G+++ +G+ ++ + P L+ + + VVCG HT VL
Sbjct: 431 GYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAGSVVCGSSHTLVLAQ 490
Query: 306 GG-ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
G ++++G+ +NG LG G ++ P+ ++ + ++ G +++ A+++ G++ +
Sbjct: 491 DGLTVWSFGAGDNGKLGHGDTSRVYRPKVIES-INGMMFYKLCAGSQYSLALNDSGQVFS 549
Query: 364 WGWGGSHGTFSEDG 377
WG G G S D
Sbjct: 550 WGCGACLGCGSPDA 563
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 159/314 (50%), Gaps = 33/314 (10%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R LT++++Y +K K+ G + ++ T+ + + WG GD G+LG S + +P
Sbjct: 2992 RQLTSLSQYVIK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3046
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A ++ +ACGG+H+ + G +Y GL ++G+LG +N L P + L+
Sbjct: 3047 LIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNT-TQLRPKLVKALEG 3105
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+ V+Q++ G + A+T G +Y WG G+LG G +P P +E L+G+
Sbjct: 3106 QRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHP--IERLNGVGVC 3163
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G+V +WG G RLGHG ++ + P+L++ L+G KV
Sbjct: 3164 QIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV---------RKPQLVETLKGKKV 3214
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLP--YSEEVV 294
A G LH + +NG+VY +GD Q+GN R+P+L+ L V
Sbjct: 3215 THVAVGALHCLSVLDNGQVYAWGDNDHG----QQGNSTTTVNRKPALVQGLEGCKISRVA 3270
Query: 295 CGGYHT---CVLTS 305
CG H+ C L S
Sbjct: 3271 CGSSHSIAWCTLDS 3284
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 136/296 (45%), Gaps = 18/296 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG N P I L+ KEVV I+ G
Sbjct: 4027 AINSGGKHCLALSAEGEVYSWGEGEDGKLG-HGNRSPCDRPRAIESLRGKEVVDIAAGGA 4085
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+ IT GELY WGK G+LG G + P V+ L G A G Q++
Sbjct: 4086 HSACITSTGELYSWGKGRYGRLGHGDSEDQTKP--KLVDALKGYRVTDVACGSGDAQTLC 4143
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L+G+ V G S
Sbjct: 4144 ITDDDSVWSWGDGDYGKLGRGG---------SDGCKVPMKIDALQGLGVIKVECGSQFSV 4194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + CG H T GE+
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEV 4254
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
YTWG N+ G LG G+ + + P R+ +++V+CG H+ A S K + G
Sbjct: 4255 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHSLAWSTNKPVNAG 4309
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 126/249 (50%), Gaps = 17/249 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G+H L LT G VY+ G DFG+LG + + P+ I+ L K VV ++ G HHS+AI
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCD-SPMLINELHGKSVVNVACGSHHSAAI 545
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
T GEL+ WG+ S G+LGLG + + I P V L G+ A G Q++A+ G
Sbjct: 546 TASGELFTWGRGSFGRLGLG--STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTG 603
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G S P+L+ +L+G+ V G +SA + +N
Sbjct: 604 SVYSWGDGEYGKLGRGG---------SEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKN 654
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
G V+ +G+ K+ H R P + L + + G +H T GEL +WG
Sbjct: 655 GAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGR 714
Query: 315 NENGCLGIG 323
N+ G LG G
Sbjct: 715 NDKGQLGEG 723
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 150/320 (46%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + +P ++ ++ +K +A GG H + LT G V++ G D
Sbjct: 2972 GEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3031
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I L+ K V I+ G HS+AI +G+LY WG G+LG G
Sbjct: 3032 GKLGHFSRMNCD-KPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGD 3090
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P V+ L G Q ALG Q++A+T G V SWG G G+LG G
Sbjct: 3091 NTTQLRP--KLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG---- 3144
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P I+ L GV V G S + ++G+V+ +G ++ H
Sbjct: 3145 -----SEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3199
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P L+ L + V G H + G++Y WG N++G G + V P VQ
Sbjct: 3200 VRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQ 3259
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3260 G-LEGCKISRVACGSSHSIA 3278
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 120/262 (45%), Gaps = 15/262 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP + + +A GGAH+ +T TG +Y+ G +G+
Sbjct: 4047 WGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGR 4106
Query: 103 LGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ + L + G + V +G + IT D ++ WG G+LG G
Sbjct: 4107 LGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG-- 4164
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ L G+ + G + SVA+T G V +WG G RLGHG E I
Sbjct: 4165 GSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHI--- 4221
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
PR L+G K+ A G LH + G VY +GD ++ N +R
Sbjct: 4222 ------RRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQR 4275
Query: 281 PSLISKL--PYSEEVVCGGYHT 300
P L++ L V CG H+
Sbjct: 4276 PRLVAALQGKKINRVACGSAHS 4297
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 151/334 (45%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV C L GG TLF +T G V ATG G
Sbjct: 3941 WGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQL-IGGEQTLFSITGDGKVCATGYGAGG 3999
Query: 102 QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LGI + L I + V I++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 4000 RLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4059
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L G A G S +T G++ SWG G GRLGHG
Sbjct: 4060 RSP--CDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD------ 4111
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + P+L+ L+G +V A +G + CI ++ V+ +GD K+ +
Sbjct: 4112 ---SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 4168
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER-- 333
+ P I L +V CG + LT G +YTWG + LG G+ D + P R
Sbjct: 4169 CKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCT 4228
Query: 334 -VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+QG + ++CG H A ++ G++ TWG
Sbjct: 4229 TLQG----KKIVSIACGSLHCVACTDAGEVYTWG 4258
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 131/301 (43%), Gaps = 37/301 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL---RISGLKK-EVVQISTG 131
+AC L L TG VY + S EP IS L E+++++
Sbjct: 439 VACSSNSLLILLRTGRVY--------------KMTNSAEPQSMHEISTLADIEIIKLAAH 484
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A+T +G++Y WG G+LG G P + L G A G S
Sbjct: 485 SEGSHCLALTSEGDVYSWGNGDFGKLGHGDTV--TCDSPMLINELHGKSVVNVACGSHHS 542
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
A+T G++ +WG G GRLG G IL TP L+ L GV V A +G
Sbjct: 543 AAITASGELFTWGRGSFGRLGLGSTEDIL---------TPALVSGLLGVTVVDVACGSGD 593
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
+ + + G VY +GD K+ + P L+ KL + V CG ++ +
Sbjct: 594 AQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCK 653
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
G ++TWG+ E LG G+ + + P +V+ + V +S G H A + EG++L+W
Sbjct: 654 NGAVFTWGNGEGYKLGHGTEEHVRFPRQVET-LAGKHVTSLSLGSHHCLATTEEGELLSW 712
Query: 365 G 365
G
Sbjct: 713 G 713
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD+G+LG G + P++ + S+ +ACG H+ +T +G ++ G FG+
Sbjct: 502 WGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGR 561
Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG+ +E+I L P +SGL VV ++ +G + A+ G +Y WG G+LG
Sbjct: 562 LGLGSTEDI---LTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGR 618
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P V+ L G+ + G + S AV G V +WG G +LGHG E +
Sbjct: 619 G--GSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHV 676
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PR ++ L G V + G H E G + +G
Sbjct: 677 ---------RFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWG 713
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 135/290 (46%), Gaps = 21/290 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G ++ G N GQLG E L P+ L VQ+ G +IT DG++
Sbjct: 3935 SGQIWGWGHNHRGQLGGVEGAKVKL-PVSCETLATMRPVQLIGGEQTLFSITGDGKVCAT 3993
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+LG+G + + PT +E + +F ++ A+ G + +A++ G+V SWG G
Sbjct: 3994 GYGAGGRLGIGGTDS--VATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGE 4051
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR I+ L G +V AAG HSACI G +Y +G
Sbjct: 4052 DGKLGHGNRSPC---------DRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKG 4102
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
++ + +P L+ L +V CG T +T +++WG + G LG
Sbjct: 4103 RYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG 4162
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
G D P ++ V +V CG + + A+++ G + TWG G H
Sbjct: 4163 RGGSDGCKVPMKIDA-LQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYH 4211
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ ++++WG N QLG G K +K I P E LS + Q G + VT GK+
Sbjct: 2912 IQTQVFVWGLNDKDQLG-GPKGSK-IKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLF 2969
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G +GRLG G + + R + + +IK KV + + G H+ + +G+V
Sbjct: 2970 ACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIK-----KVAVHSGGR-HAMALTVDGKV 3023
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +G+ K+ + +P LI L ++ CGG H+ + S G+LYTWG E
Sbjct: 3024 FSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEY 3083
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG 367
G LG G P+ V+ V QV+ G + T A+++ G + +WG G
Sbjct: 3084 GRLGHGDNTTQLRPKLVKA-LEGQRVIQVALGSRDAQTLALTDSGTVYSWGDG 3135
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 21/186 (11%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+T G V SWG G G+LGHG + + +P LI EL G V A G H
Sbjct: 491 LALTSEGDVYSWGNGDFGKLGHGD---------TVTCDSPMLINELHGKSVVNVACGSHH 541
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG--YHTCVLTS 305
SA I +G ++ +G + ++ P+L+S L +V CG T L
Sbjct: 542 SAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD 601
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
G +Y+WG E G LG G + +P +++QG V +V CG +++AA+ + G +
Sbjct: 602 TGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQG----LDVTRVYCGPQYSAAVCKNGAV 657
Query: 362 LTWGWG 367
TWG G
Sbjct: 658 FTWGNG 663
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 73/178 (41%), Gaps = 54/178 (30%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G +GRLGLGS E P + S ++ +ACG A T+ L +TG VY+ G ++
Sbjct: 554 WGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEY 613
Query: 101 GQLG---------------------------------ISEN-------------IGYSLE 114
G+LG + +N +G+ E
Sbjct: 614 GKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTE 673
Query: 115 -----PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
P ++ L K V +S G HH A T +GEL WG+N GQLG G K P
Sbjct: 674 EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEP 731
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP C+ + + ++ACG H + T+ G VY G ND GQ
Sbjct: 4205 WGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQ 4264
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G HS A
Sbjct: 4265 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHSLA 4299
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PY 289
+ ++E +K+ + G H + G VY +G+ K+ + P LI++L
Sbjct: 473 LADIEIIKLAAHSEGS-HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKS 531
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
V CG +H+ +T+ GEL+TWG G LG+GS + + +P V G + VD V+CG
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVD-VACG 590
Query: 350 W--KHTAAISE-GKILTWGWG 367
T A+++ G + +WG G
Sbjct: 591 SGDAQTIALADTGSVYSWGDG 611
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G++A++V+ KV+C SG+ Q +V WG +LG + S I
Sbjct: 2892 GQRASQVMA--KKVKCGSGVKDIQT--------------QVFVWGLNDKDQLGGPKGSKI 2935
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEG 275
TP + + L +K G C+ ++G+++ G+ ++ G
Sbjct: 2936 ---------KTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAG 2986
Query: 276 NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
N + L S Y + V GG H LT G++++WG ++G LG S P
Sbjct: 2987 NVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 3046
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
++ S+ V ++CG H+AAI S G + TWG G
Sbjct: 3047 LIEALRSKR-VRDIACGGSHSAAIISNGDLYTWGLG 3081
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 157/327 (48%), Gaps = 37/327 (11%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K+DI + G I++ + F ++G+ ++G+LGLGS + +P A +
Sbjct: 54 SKFWFKKDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 111
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K +ACG HTL LT G VYATG N+ GQLG+ E + L S K +
Sbjct: 112 PEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 169
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G + S+A+T DGEL+MWG NS GQ+GL +P V G + G+
Sbjct: 170 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTV----GKPISWISCGY 225
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G++ ++G SG+LG L + P+L+ + +++A G
Sbjct: 226 YHSAFVTTEGELYTFGEPESGKLG-------LPPKLLVNHKVPQLVPGISEKVIQVACGG 278
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGN--------HARRPSLISKLPYSE--EVVCG 296
H+ + E VY FG L Q G P +I + + V CG
Sbjct: 279 G-HTVVLTEKA-VYTFG-------LGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCG 329
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
HT ++T G LYT+G +G LG+G
Sbjct: 330 ENHTALITESGLLYTFGDGRHGKLGLG 356
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 145/318 (45%), Gaps = 34/318 (10%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F+K +L+CG HT T ++ G N++GQLG+ + +P I LK E V+
Sbjct: 58 FKKDIPISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVN-KPTCIKALKPEKVK 116
Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
++ G +H+ +T G++Y G N+ GQLGLG + L FT KQ
Sbjct: 117 FVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDER------SAFHLISFFTSQHKIKQ 170
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G S A+T G++ WG G++G T+ P + G +
Sbjct: 171 LSAGSNTSAALTEDGELFMWGDNSEGQIG---------LQNITNMCVPHQV--TVGKPIS 219
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSEEVV---C 295
+ G+ HSA + G +Y FG+ K+ NH + P L+ + SE+V+ C
Sbjct: 220 WISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNH-KVPQLVPGI--SEKVIQVAC 276
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
GG HT VLT +YT+G + G LG+G+ S +V + + V CG HTA
Sbjct: 277 GGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTAL 335
Query: 356 ISEGKILTWGWGGSHGTF 373
I+E +L G HG
Sbjct: 336 ITESGLLYTFGDGRHGKL 353
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 14/69 (20%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P +CS F K+ + +ACGG H L V+AT
Sbjct: 345 FGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHML-------VFAT----- 392
Query: 101 GQLGISENI 109
+LG++E+I
Sbjct: 393 PRLGMAEDI 401
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K +ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G + P+ + ++ Q+S G + S+A+T +GEL+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ ++G +G+LG +E I
Sbjct: 176 NVTNVCVPHQVTI--GKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLI--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ TP+L+ + +++A G H+ + E VY FG + +F+
Sbjct: 231 ----NHKTPQLVTRIPEKVIQVACGGG-HTVVLTET-IVYTFGLGQFGQLGLGTFIFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G G LG+G
Sbjct: 283 --TSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDGRYGKLGLG 330
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 146/298 (48%), Gaps = 21/298 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
L+CG HT +T +Y G N++GQLG+ + +P + LK E V+ ++ G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTIN-KPTCVKALKPEKVKYVACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ T +G +Y G N++GQLGLG + P S KQ + G S A+T
Sbjct: 99 TLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISF-FTSQHKIKQLSAGSNTSAALTE 157
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ WG G++G +++ P + G + + G+ HSA +
Sbjct: 158 NGELFMWGDNSEGQIGLKNVTNVC---------VPHQV--TIGKPISWISCGYYHSAFVT 206
Query: 255 ENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELY 310
+G +Y FG+ K+ E NH + P L++++P +V CGG HT VLT +Y
Sbjct: 207 MDGELYTFGECENGKLGLPEELLINH-KTPQLVTRIPEKVIQVACGGGHTVVLTETI-VY 264
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
T+G + G LG+G+ S + + + +SCG HTA I+E G++ T+G G
Sbjct: 265 TFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDG 322
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT----G 96
+G+G YG+LGLG + +++ P +C F + ++ +ACGG H + ++AT
Sbjct: 319 FGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMV-------IFATPRLGS 371
Query: 97 LNDFGQLGISENIGYSLEPLRIS 119
N+F +S+ YS PL S
Sbjct: 372 ANEF----VSDEPNYSYFPLSSS 390
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG ++ +P A + ++CG H++ + G V+A G GQL
Sbjct: 46 GDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E +L P+RI L +++Q+S G++HS A++ DG+++ WGKNS GQLGLG +++
Sbjct: 106 GIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSS 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV L GI Q A G S A++ G WG+ G+L E+S + +
Sbjct: 166 SQAS-PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISK 224
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 225 ------PHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQ 278
Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
L+ + ++ CG YHT V T+G
Sbjct: 279 LVEGIKGQVSKIECGSYHTIAYVYTTG 305
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 150/303 (49%), Gaps = 28/303 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
A G H+L L VY+ G N GQLG E EP++ G ++ +S G HS
Sbjct: 27 ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALG-TLDIDLVSCGKEHS 85
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ +P +++ L GI Q + G S+A++
Sbjct: 86 IAVCHKGRVFAWGAGSEGQLGIGE-FKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSED 144
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V SWG G+LG G +SS S+ +P+ + LEG+ + AAG HS +
Sbjct: 145 GQVFSWGKNSQGQLGLGMQSS--------SQASPQKVTSLEGIPLAQVAAGGSHSFALSL 196
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSG 306
G Y +G +V ++ N + ISK P+S + + CG HT VLT
Sbjct: 197 TGTSYGWGSNSVGQLALSGENSTVQ---ISK-PHSIDALKNLGVIYISCGYEHTAVLTKD 252
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTW 364
G+++T+G N +G L P+ V+G + V ++ CG HT A + G++++
Sbjct: 253 GQVFTFGDNSSGQLQNNPRGKRRGPQLVEG--IKGQVSKIECGSYHTIAYVYTTGQVVSL 310
Query: 365 GWG 367
G G
Sbjct: 311 GHG 313
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 24/287 (8%)
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
S +P R++G E++Q ++G HS + + +Y G NS GQLG ++ P P
Sbjct: 9 SRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEP-- 66
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ L + + G E S+AV G+V +WGAG G+LG G+ I P
Sbjct: 67 IQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEI--------NLMPM 118
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL-- 287
IK L G+K+ + G HS + E+G+V+ +G + ++ L + + P ++ L
Sbjct: 119 RIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEG 178
Query: 288 -PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPV 343
P + +V GG H+ L+ G Y WGSN G L + S + P + V
Sbjct: 179 IPLA-QVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDA-LKNLGV 236
Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED--GHSSGGQLDRG 387
+SCG++HTA ++ +G++ T+G S G + G G QL G
Sbjct: 237 IYISCGYEHTAVLTKDGQVFTFG-DNSSGQLQNNPRGKRRGPQLVEG 282
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P+ + ++CG H+L L+E G V++
Sbjct: 93 RVFA--WGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSW 150
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ P +++ L+ + Q++ G HS A+++ G Y WG NS GQ
Sbjct: 151 GKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQ 210
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ + I P ++ L + + G+E + +T G+V ++G SG+L +
Sbjct: 211 LALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNP 270
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G KI + A + G+V G
Sbjct: 271 RGKRRG---------PQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311
>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
Length = 440
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 144/297 (48%), Gaps = 22/297 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG++G + E P K +K +A G H+L + E G V+A G N++GQL
Sbjct: 43 GRNNYGQIGDSTYEDHNTPYHVERLPK--IKIIARGYDHSLAIDEQGRVWAWGRNNYGQL 100
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + I ++ L ++ ++ + + G+ H+ A+ DG ++ WG N G+LG G +
Sbjct: 101 GSAIPIDFNTPQLVVN--HRDFISVEGGHWHTVALKEDGTVWTWGHNFYGELGDGTREHS 158
Query: 164 VIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P + L GI K ++G+ ++A+ G+V SWG+ G LGH F
Sbjct: 159 QYPRSVVKKDKTTLQGI-VKIVSVGY-HTLALDKNGEVYSWGSNDFGELGH--------F 208
Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y ++ EG++ +K A G+ HS I+ENG ++++G ++ +H
Sbjct: 209 HNVIQHYAEKV----EGLQNIKSIAVGWHHSVAINENGELFMWGSDPSTQVRESTSDHFN 264
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
I LP ++ CG +H+ + G+++ WG+N G LG P+++ G
Sbjct: 265 SIVKIDSLPPMVKIACGSWHSLAIDETGQVWGWGNNRYGMLGTKDTISYTYPKKIPG 321
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 26/245 (10%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ G H+ + DG+++ G+N+ GQ +G + P VE L I K A G++
Sbjct: 23 VDAGNGHAIVLDKDGKVFTMGRNNYGQ--IGDSTYEDHNTPYHVERLPKI--KIIARGYD 78
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL-IKELEGVKVKIAAAG 246
S+A+ G+V +WG G+LG S+I TP+L + + + V+ G
Sbjct: 79 HSLAIDEQGRVWAWGRNNYGQLG----SAI-----PIDFNTPQLVVNHRDFISVE---GG 126
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTC 301
H+ + E+G V+ +G ++ H++ P + K + ++V GYHT
Sbjct: 127 HWHTVALKEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVKIVSVGYHTL 186
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
L GE+Y+WGSN+ G LG + H E+V+G + ++ GW H+ AI+E G+
Sbjct: 187 ALDKNGEVYSWGSNDFGELGHFHNVIQHYAEKVEGL---QNIKSIAVGWHHSVAINENGE 243
Query: 361 ILTWG 365
+ WG
Sbjct: 244 LFMWG 248
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 163/325 (50%), Gaps = 31/325 (9%)
Query: 44 GNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLN 98
G G YGRLG G+ + R RP+ +A + + LA H+L LTETG V++ G
Sbjct: 3462 GEGSYGRLGQGNSDDLPRLRPI--TALQGFVVTELATSTGLEGHSLALTETGEVFSWGDG 3519
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
D+G+LG N P +I L+ ++V+ ++ G+ HS+ +TVDG+L+ +G + G+LGL
Sbjct: 3520 DYGKLG-HGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGL 3578
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G + K +P +V L I + A G +V VT + V ++G G G+LG G
Sbjct: 3579 GNTSNK--KLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG---- 3632
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
R+T++ TP+ + + +K G + + + G+VY G + + +
Sbjct: 3633 -----RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQ 3687
Query: 277 HARR-PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
HA P + L + E++ G H LT G++++WG++ +G LG+G P+R
Sbjct: 3688 HADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQT----LPQR 3743
Query: 334 VQGPFSESP---VDQVSCGWKHTAA 355
S + Q+S G H+AA
Sbjct: 3744 EPCLISSLQGKGIRQISAGHNHSAA 3768
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 33/323 (10%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDFGQ 102
G+YGRLGLG ++ RP + + +K L HTL + G +Y+ G D+G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ L + ++ +VV QI+ GY HS+AIT +G LY WG G+LG G
Sbjct: 501 LGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNH 560
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ IPT V+ ++G+ + F ++ V S+GAG +G+LGHG S +
Sbjct: 561 SR--SIPTLVKDITGVGSVSCGSSFTVVIS-QDATTVWSFGAGDNGKLGHGDTSRV---- 613
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI--------FGDRAVDKMLFQ 273
Y P++I L+G+ ++ S + G+V++ +G ++ +
Sbjct: 614 -----YRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLVPK 668
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHSPE 332
+ + +I ++ G H LT ++Y+WG+N +G G+G+ + + P
Sbjct: 669 RLDEFQDLQII-------DIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPR 721
Query: 333 RVQGPFSESPVDQVSCGWKHTAA 355
+V G F + Q+S G H+ A
Sbjct: 722 KVTG-FDNHVIYQISVGTSHSIA 743
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 45/365 (12%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG G +G+L S +P + S+F K K + CG T + G V A G
Sbjct: 3409 AYTWGGGRHGQLA-ESGRLVLQPTLTSSFSKA--KQIHCGHNSTFVIEHDGTVLACGEGS 3465
Query: 100 FGQLGISENIGYSLEPLR-ISGLKKEVVQ---ISTGYH-HSSAITVDGELYMWGKNSNGQ 154
+G+LG + L LR I+ L+ VV STG HS A+T GE++ WG G+
Sbjct: 3466 YGRLG--QGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGK 3523
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P ++E L G A G + S VT GK+ ++GA GRLG G
Sbjct: 3524 LGHGNSERQ--RRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNT 3581
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
S ++ P + L+ + V++ A G H+ + + V+ FG+ ++
Sbjct: 3582 S---------NKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG 3632
Query: 274 EGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P + SKL +++ CG T LT G++Y+ G N C GI +D H+
Sbjct: 3633 RTTAKMTPQYVDAFSKLNI-KKICCGARFTLALTKEGKVYSCGHNR--CNGIFEVDTQHA 3689
Query: 331 ---PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDR 386
P++V SE ++ ++ G++H A++ EG + W W G+ + GQL
Sbjct: 3690 DYYPQQVMA-LSEQFIEDIAAGYEHALALTKEGDV--WSW----------GNDTDGQLGL 3736
Query: 387 GQLTP 391
GQ P
Sbjct: 3737 GQTLP 3741
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 13/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ E + RP A + +ACG H+ +T G ++ G +D G+
Sbjct: 3516 WGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGR 3575
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P +++ L+ +V+ I+ G +H+ +T D E ++ +G+ GQLGLG+
Sbjct: 3576 LGLGNTSNKKL-PAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRT 3634
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK+ P V+ S + K+ G ++A+T GKV S GH + + I
Sbjct: 3635 TAKM--TPQYVDAFSKLNIKKICCGARFTLALTKEGKVYS--------CGHNRCNGIFEV 3684
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++Y P+ + L ++ AAG+ H+ + + G V+ +G+ ++ + R
Sbjct: 3685 DTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQRE 3744
Query: 281 PSLISKL 287
P LIS L
Sbjct: 3745 PCLISSL 3751
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
T R +G G+YG+LGLG ++ P AF K ++K + CG TL LT+ G VY
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVY 3671
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
+ G N + + P ++ L ++ ++ I+ GY H+ A+T +G+++ WG +++
Sbjct: 3672 SCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTD 3731
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLG+ + P + L G +Q + G S A T A S R
Sbjct: 3732 GQLGLGQTLPQ--REPCLISSLQGKGIRQISAGHNHSAAWT--------VAPASIRKAMA 3781
Query: 213 QESSI-LGFLRSTSEYTPRLIKELEGVKVKI 242
SS+ LG E P + L G+ +++
Sbjct: 3782 TSSSLELGL----PERIPEIYGSLAGIDIQL 3808
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 25/276 (9%)
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+ QL S L P ++ + +E+++ T ++ E Y WG +GQL
Sbjct: 3365 NLFQLITSTKENEILPPWKL-AMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLA-- 3421
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ +++ PT S KQ G + + G VL+ G G GRLG G
Sbjct: 3422 -ESGRLVLQPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGN----- 3473
Query: 219 GFLRSTSEYTPRL--IKELEG-VKVKIAAAGFL--HSACIDENGRVYIFGDRAVDKMLFQ 273
S+ PRL I L+G V ++A + L HS + E G V+ +GD K+
Sbjct: 3474 ------SDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHG 3527
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
RRP I L + V CG H+ ++T G+L+T+G+++ G LG+G+ P
Sbjct: 3528 NSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLP 3587
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+V V+ ++CG HT ++ + W +G
Sbjct: 3588 AQVTA-LQPIMVELIACGANHTVVVTTDRESVWTFG 3622
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 56/275 (20%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIF-----------TKQAALGFE 187
+ +Y+WG NS+ QLG+ + +IP P+ G + + + FE
Sbjct: 404 ESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRFE 463
Query: 188 Q----------------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
++A+ G++ SWG G G+LGHG ++ +P+L
Sbjct: 464 HECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNH---------VTQKSPKL 514
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPY 289
I ++G V+ A G+ HSA I G +Y +GD + L NH+R P+L+ +
Sbjct: 515 ILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGR-LGHGDNHSRSIPTLVKDITG 573
Query: 290 SEEVVCGGYHTCVLTSGG-ELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQ 345
V CG T V++ ++++G+ +NG LG G ++ P+ +QG + +
Sbjct: 574 VGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLL----IRK 629
Query: 346 VSCGWKHTAAISE-GKILTW------GWGGSHGTF 373
V C + + A++ G++ W G+G + TF
Sbjct: 630 VCCASQSSLALTSIGQVFVWGSGPCLGYGQADATF 664
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 22/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + ++ +A G H+ +T G +Y G D+G
Sbjct: 493 WGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYG 552
Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
+LG +N S I L K++ +S G + I+ D ++ +G NG+LG
Sbjct: 553 RLGHGDNHSRS-----IPTLVKDITGVGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGH 607
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P + L G+ ++ + S+A+T G+V WG+G LG+GQ +
Sbjct: 608 GDTSR--VYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC--LGYGQADA- 662
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
FL P+ + E + +++ A G H + + VY +G+ A
Sbjct: 663 -TFL------VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNA 704
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V S + ++ + C +L LT G V+ G
Sbjct: 597 FGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC-- 654
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + L P R+ + +++ I+ G +H A+T D ++Y WG N++GQ GLG
Sbjct: 655 LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNN 714
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ V+ +P KV Q ++G S+A T
Sbjct: 715 SPVL-LPRKVTGFDNHVIYQISVGTSHSIAWTA 746
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG+GDYGRLG G SR P + + +++CG + T+ +++ V++ G D G
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQDATTVWSFGAGDNG 603
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P IS L+ ++ ++ S A+T G++++WG S LG G+
Sbjct: 604 KLGHGDT-SRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWG--SGPCLGYGQA 660
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + +P +++ + A+G +A+T V SWG SG+ G G +S +
Sbjct: 661 DATFL-VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLL 719
Query: 221 LRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
R + + +I ++ G IA CI
Sbjct: 720 PRKVTGFDNHVIYQISVGTSHSIAWTALPTDRCI 753
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
HT + S G +Y+WG + G LG G+ SP+ + GP V Q++ G++H+AAI S
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539
Query: 358 EGKILTWGWGGSHGTFSE-DGHS 379
EG + TWG G +G D HS
Sbjct: 540 EGLLYTWG-DGDYGRLGHGDNHS 561
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGIC--KRWISSTLQRRFAALWGNGDYGRLGLGSLESR 59
LGR+ MT Y+ KL K C + ++ T + + + N G + + +
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHAD 3690
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+ P A + ++ +A G H L LT+ G V++ G + GQLG+ + + EP IS
Sbjct: 3691 YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQR-EPCLIS 3749
Query: 120 GLK-KEVVQISTGYHHSSAITV 140
L+ K + QIS G++HS+A TV
Sbjct: 3750 SLQGKGIRQISAGHNHSAAWTV 3771
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 144/298 (48%), Gaps = 41/298 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LG GS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 58 MFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEG 117
Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + S L IS K+ + Q++ G + S+ +T DG+L MWG NS GQ+GLG
Sbjct: 118 QLGLGDTEERSTFHL-ISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGD 176
Query: 160 KAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
KA +P I V C+S G+ S +T G++ ++G +G+LG
Sbjct: 177 KAYVSVPHQVDIGKPVSCIS--------CGYYHSALITQDGELYTFGEPENGKLG----- 223
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
L + + P+L+ + G KV A G H+ + E G VY FG L Q G
Sbjct: 224 --LSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLAE-GDVYTFG-------LGQYG 272
Query: 276 N--------HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + + CG HT ++T G +YT+G +G LG+G
Sbjct: 273 QLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLG 330
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 146/307 (47%), Gaps = 28/307 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
++CG HT +TE G +Y G N++GQLG + +P + LK E V+++ G +H
Sbjct: 40 ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVN-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G NS GQLGLG + +I TK + KQ A G S
Sbjct: 99 TLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKI-----KQLAAGSYTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G+++ WG G++G G ++ + P + G V + G+ HS
Sbjct: 154 VLTEDGQLVMWGDNSEGQIGLGDKAYV---------SVPHQVDI--GKPVSCISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSG 306
A I ++G +Y FG+ K+ Q NH + P L+S + +V CGG HT VL G
Sbjct: 203 ALITQDGELYTFGEPENGKLGLSPKQLKNH-KLPQLVSGISGKVSKVACGGGHTVVLAEG 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
++YT+G + G LG G+ S + + + ++CG HTA I+E ++
Sbjct: 262 -DVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFG 320
Query: 367 GGSHGTF 373
G HG
Sbjct: 321 DGRHGKL 327
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + + ++ACGG H L
Sbjct: 319 FGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVF 364
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 175/374 (46%), Gaps = 22/374 (5%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK 74
K D KL +LG+ +S WG G LG G P V A ++
Sbjct: 350 KADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIR 409
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYH 133
+ACG HTL ++ G +++ G G+LG+ +NI PL+I + + +S
Sbjct: 410 TVACGTEHTLAVSVNGEMFSWGCGRGGKLGL-KNILDRYMPLKIGAFENVNITFVSCNEL 468
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+++T GELY +G+ S LG + K +P KV+ + K + G E ++A+
Sbjct: 469 HSASVTESGELYTFGR-SGPHLGYTTEDRKQ-AVPRKVDFSTANKIKAVSCGLEFTIALN 526
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ S+G G+LG G + I P LIK L GV++ + G H +
Sbjct: 527 SEGELYSFGKNDCGQLGAGHFNDI---------EEPYLIKHLNGVRISKVSCGSKHVGAV 577
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
NG V+++G ++ + P ++EE+ CGG HT VL+ G +Y
Sbjct: 578 TVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVY 637
Query: 311 TWGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
+G+ ++G LG+ + + +P + P + + + +V CG +HTAA++E G + TWG
Sbjct: 638 VFGNGQSGQLGVAVNQTSPYITNPCILSMP-NNTKIAKVDCGIEHTAAVTESGCLYTWG- 695
Query: 367 GGSHGTFSEDGHSS 380
GS G H
Sbjct: 696 NGSRGRLGHGDHQD 709
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 161/327 (49%), Gaps = 34/327 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LGL ++ R+ P+ AFE ++ ++C H+ +TE+G +Y FG+
Sbjct: 430 WGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYT-----FGR 484
Query: 103 LGISENIGYSLEPLRISGLKK-------EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G ++GY+ E + + +K ++ +S G + A+ +GELY +GKN GQL
Sbjct: 485 SG--PHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQL 542
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
G G I P ++ L+G+ + + G + AVT G V WG+ G+LG + E
Sbjct: 543 GAGH--FNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLE 600
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---L 271
+ + F ++ + +E++ +K G H+ + G VY+FG+ ++ +
Sbjct: 601 AHDIPFEAPSTFWN----EEIQDIK-----CGGSHTVVLSCTGVVYVFGNGQSGQLGVAV 651
Query: 272 FQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
Q + P ++S +P + ++ CG HT +T G LYTWG+ G LG G
Sbjct: 652 NQTSPYITNPCILS-MPNNTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGRLGHGDHQDR 710
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAA 355
+ P V+ + V ++CG HTAA
Sbjct: 711 YVPTLVES-LAYKQVQSIACGAYHTAA 736
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 42 LWGNGDYGRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++GNG G+LG+ ++ P + S + + CG HT +TE+GC+Y G
Sbjct: 638 VFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNG 697
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
G+LG ++ + L S K+V I+ G +H++A +
Sbjct: 698 SRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACVI 739
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 120 bits (300), Expect = 2e-24, Method: Composition-based stats.
Identities = 107/352 (30%), Positives = 165/352 (46%), Gaps = 35/352 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG DY +LGLG +R P ++ ++A G +L L G ++A G N +G
Sbjct: 90 VWGRNDYNQLGLGDDINRLAPEQAPVVS--NIVSVAAGRLFSLALASDGSLWAWGGNYYG 147
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ +N L P + GL +V I+ G +H+ A T GE++ G+N +GQLG
Sbjct: 148 QLGMGDN-DNRLTPSKTPGLS-DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDH 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A P +V LS + K A G S+A+ G V +WG S +LG G +
Sbjct: 206 ADA---PVQVAGLSNV--KSVAAGEFFSLALKNDGTVWAWGNNESAQLGTG--------I 252
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP I L + AAG H+ + E+G V+ +G ++ F + + P
Sbjct: 253 AGEAVATPAPIAVLSNITA--IAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAP 310
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+S L + G +H+ LTS G L+ WG+N +G LG + P +V S S
Sbjct: 311 GRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVS---SIS 367
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
+ G +H+ AI ++G + W WGG ++ GQL LTP+
Sbjct: 368 NAVSFAGGQRHSLAIAADGSV--WSWGG----------NAYGQLGVESLTPA 407
Score = 112 bits (280), Expect = 4e-22, Method: Composition-based stats.
Identities = 96/311 (30%), Positives = 146/311 (46%), Gaps = 26/311 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGYH 133
+A G H L L G V++ G N GQLG+ + YS + P +I+ + V I+ G
Sbjct: 1038 IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN-VAAIACGGS 1096
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG L+ WG N GQLGLG +K P KV +S + A G S+A+T
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTP--QKVNAISNV--AAIAAGEYYSLALT 1152
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V SWG G+LG G + TP+ ++ L V AAG HS +
Sbjct: 1153 RDGSVWSWGDNSDGQLGLGD---------NEDRNTPQKVEVLSNVAA--IAAGEDHSLAL 1201
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V+ +G + ++ + + P ++ + + + G H+ ++ G + WG
Sbjct: 1202 TRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFAISEEGLAWAWG 1261
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
N +G LGIG+ L + Q S V +S G H+ A++E L W WG
Sbjct: 1262 YNYDGQLGIGTSGSLANENTPQKVKVISNVVGLSGGNYHSLALTEDGAL-WAWGD----- 1315
Query: 374 SEDGH--SSGG 382
++DG S+GG
Sbjct: 1316 NDDGQIGSTGG 1326
Score = 110 bits (275), Expect = 1e-21, Method: Composition-based stats.
Identities = 91/299 (30%), Positives = 139/299 (46%), Gaps = 19/299 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGY 132
++A GG H L L G V++ G N GQLG+ YS E P +I+ + V I+ G
Sbjct: 548 SIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN-VAAIACGG 606
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HS A+ DG + WG N GQLGLG +K P KV LS + A G S+A+
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTP--RKVNALSNVVAMAA--GDRHSLAL 662
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G + SWG G+LG G + TPR + + V AAG+ HS
Sbjct: 663 TLDGSLWSWGDNTYGQLGLGD---------NDHRNTPRKVNAISNVVA--IAAGYRHSLA 711
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G V+ +G+ ++ + + P ++ + + + G ++ ++ G ++ W
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAW 771
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
G N +G LGIG+ L Q S V +S G H+ A++E L W WG +
Sbjct: 772 GYNCSGQLGIGTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGAL-WAWGNNEA 829
Score = 109 bits (273), Expect = 2e-21, Method: Composition-based stats.
Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ A+ACGG+H+L L G ++ G N +GQLG+ +N+ + P +++ L VV ++ G
Sbjct: 598 NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKT-TPRKVNALSN-VVAMAAG 655
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+T+DG L+ WG N+ GQLGLG + P KV +S + A G+ S+A
Sbjct: 656 DRHSLALTLDGSLWSWGDNTYGQLGLGDNDHR--NTPRKVNAISNVVA--IAAGYRHSLA 711
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G V SWG G+LG G + TP+ + + +K A G +S
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGD---------NDDRNTPQPVTTISNIKA--IAVGNNYSI 760
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHA-----RRPSLISKLPYSEEVVCGGYHTCVLTSG 306
I E G V+ +G ++ G H P + + + G H+ LT
Sbjct: 761 AISEEGLVWAWGYNCSGQLGI--GTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTED 818
Query: 307 GELYTWGSNENG 318
G L+ WG+NE G
Sbjct: 819 GALWAWGNNEAG 830
Score = 99.0 bits (245), Expect = 4e-18, Method: Composition-based stats.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L L G V+ G ND+ QLG+ ++I L P + + + +V ++ G S A+ D
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDIN-RLAPEQ-APVVSNIVSVAAGRLFSLALASD 135
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G L+ WG N GQLG+G ++ P+K LS + A G ++A T G+V W
Sbjct: 136 GSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDV--AAIAGGDYHALAATQSGEV--W 189
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
GR HGQ LGF T ++ ++ VK AAG S + +G V+
Sbjct: 190 AM---GRNDHGQ----LGF---TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWA 239
Query: 262 FGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+G+ ++ G P+ I+ L + G H L G ++ WG+N +G L
Sbjct: 240 WGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQL 299
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
G G + +P RV S + V ++ GW H+ A++ +L W WG +
Sbjct: 300 GFGDFETPKAPGRVS---SLADVTAIASGWFHSLALTSDGVL-WAWGNN 344
Score = 98.6 bits (244), Expect = 5e-18, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 20/294 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHH 134
+A GG +L L G +++ G N GQLG+ ++ P ++ L +I+ G +H
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP-AAKIAAGDNH 1044
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A+ DG ++ WG NS+GQLGLG P K+ +S + A G S+AV
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV--AAIACGGSHSLAVA 1102
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + SWG G+LG G + S+ TP+ + + V AAG +S +
Sbjct: 1103 RDGSLWSWGYNYYGQLGLGD---------NYSKTTPQKVNAISNVAA--IAAGEYYSLAL 1151
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V+ +GD + ++ + P + L + G H+ LT G +++WG
Sbjct: 1152 TRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWG 1211
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
N G LG+ D ++P+ V + S + ++ G H+ AISE + L W WG
Sbjct: 1212 RNSRGQLGLDDNDDRNTPQPVT---TISNIKAIAAGNSHSFAISE-EGLAWAWG 1261
Score = 88.6 bits (218), Expect = 5e-15, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 31/313 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYH 133
+A GG +L L G V++ G N GQLG+ EN P + L I+ G
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDV-FTPTNVDALPL-AASIAAGGG 554
Query: 134 HSSAITVDGELYMWGKNS-NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+ DG ++ WG+NS P K+ +S + A G S+A+
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNV--AAIACGGSHSLAL 612
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G SWG G+LG G + S+ TPR + L V AAG HS
Sbjct: 613 ARDGSFWSWGYNYYGQLGLGD---------NVSKTTPRKVNALSNVVA--MAAGDRHSLA 661
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G ++ +GD ++ + +H P ++ + + G H+ LT G +++W
Sbjct: 662 LTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSW 721
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG----- 367
G+N G LG+G D ++P+ V + S + ++ G ++ AISE + L W WG
Sbjct: 722 GNNTRGQLGLGDNDDRNTPQPVT---TISNIKAIAVGNNYSIAISE-EGLVWAWGYNCSG 777
Query: 368 ----GSHGTFSED 376
G+HG+ +++
Sbjct: 778 QLGIGTHGSLADE 790
Score = 84.7 bits (208), Expect = 7e-14, Method: Composition-based stats.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 29/294 (9%)
Query: 83 TLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
T+FL G +A G+ D Q G +N + EP +G +++ HS A
Sbjct: 25 TIFLIAPGAAFAADSDGDGVED-AQDGCPDNF-FKSEP-GFTGCGNAEPMVASRLDHSLA 81
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ DG +++WG+N QLGLG ++ P + +S I + A F S+A+ G
Sbjct: 82 LKGDGTVWVWGRNDYNQLGLGDDINRL--APEQAPVVSNIVSVAAGRLF--SLALASDGS 137
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G+LG G + R T TP L V A G H+ ++G
Sbjct: 138 LWAWGGNYYGQLGMGDNDN-----RLTPSKTPGL------SDVAAIAGGDYHALAATQSG 186
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
V+ G ++ F G+HA P ++ L + V G + + L + G ++ WG+NE+
Sbjct: 187 EVWAMGRNDHGQLGFT-GDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNES 245
Query: 318 GCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
LG G + + + +P + S + ++ G +H A++E G + WG GS
Sbjct: 246 AQLGTGIAGEAVATPAPIA---VLSNITAIAAGRRHAMALAEDGSVWAWGANGS 296
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LGLG + R P + ++KA+A G +++ ++E G V+A G N GQ
Sbjct: 721 WGNNTRGQLGLGDNDDRNTPQPVTTIS--NIKAIAVGNNYSIAISEEGLVWAWGYNCSGQ 778
Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LGI + + E P ++ + VV +S G HS A+T DG L+ WG N GQ+ ++
Sbjct: 779 LGIGTHGSLADENTPQKVIVISN-VVGLSAGSSHSIALTEDGALWAWGNNEAGQIA-AEE 836
Query: 161 AAKVIPIPTKV 171
A + I P +V
Sbjct: 837 AIEYIDNPVQV 847
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISKLPYSEEVVCGGYH 299
+ AAG S + +G ++ +GD ++ G P+ + LP + ++ G H
Sbjct: 985 MVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAAGDNH 1044
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
L G +++WG N +G LG+GS + R Q + S V ++CG H+ A++ +
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAVARD 1104
Query: 359 GKILTWGW 366
G + +WG+
Sbjct: 1105 GSLWSWGY 1112
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGL + + +P A + + +CG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P K++ G + G+ S VT G++ ++G +G+LG L
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
+ P+ + L G KVKI + G H+ + E VY FG ++ +F+
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + L V CG HT V+T G LYT+G +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 26/304 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV S G +H
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G+LY G NS GQLGLG + + T + +S T KQ + G S
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G+LG +E+ TP+ I G + + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
A + ++G +Y FG+ K+ ++P +S L ++V CGG HT +T
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
E+YT+G + G LG G+ + ++ + V+CG HTA I++ +L
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGD 323
Query: 368 GSHG 371
G HG
Sbjct: 324 GRHG 327
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 23/280 (8%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + IS G H+ +T +G+LY++G N+ GQLGL
Sbjct: 19 FGKSKFAENI-----PSKFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I PT V+ L A+ G ++ T GK+ S G G+LG G S
Sbjct: 72 EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + T IK+L +AG SA + +G+++++GD + ++ ++
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGP 337
P I + CG YH+ +T GELYT+G ENG LG+ S + P+RV G
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG- 242
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTF 373
V VSCG +HT A++E ++ T+G G HGTF
Sbjct: 243 -LSGKVKIVSCGGEHTIAVTEKEVYTFGLGQFGQLGHGTF 281
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
L+ K + G H+ + NG++Y+FG ++ + G+ +P+ + L SE+VV
Sbjct: 34 LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKAL-KSEKVV 92
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG HT + T G+LY+ G N G LG+G S + + ++ + Q+S G
Sbjct: 93 FASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSN 152
Query: 352 HTAAIS-EGKILTWGWG--GSHGTFSEDGHSSGGQLDRGQ 388
+AA++ +GK+ WG G G E +S+ ++D G+
Sbjct: 153 TSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGK 192
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L V+AT
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373
Query: 101 GQLGISENI 109
++ I++ +
Sbjct: 374 SEMMINDEL 382
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 26/323 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +G+LGLG E+ ++P + + +K +ACG +HT+ TE VY G N GQ
Sbjct: 58 FGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNSDGQ 117
Query: 103 LGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-- 158
LG S ++ +S P+ ++ K ++Q+S G +H++A+ +G++Y+WG NS+ QLGL
Sbjct: 118 LGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSM 177
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + +PT V + + G + VT G + + G G+LGHG S
Sbjct: 178 DDDSVNVSVPTIVPIALPVL--YVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWS--- 232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + T +++K + G H+ +++ G+V++ G+ ++ +
Sbjct: 233 ---LSRVDTTEKIVK---------VSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQ 280
Query: 279 --RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P I+ P ++VCG H+ +T+ G+L+ G + G LGI ++ + +P V
Sbjct: 281 GHLYPCPITNEPIV-QIVCGQSHSAFITASGKLFMCGDGKYGKLGI-DVNQITTPTLVLA 338
Query: 337 PFSES-PVDQVSCGWKHTAAISE 358
++ V VSCG HT +E
Sbjct: 339 FVDKNLNVQMVSCGGNHTLIHAE 361
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 32/302 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGY 132
++CG H+ + + G V+ G N FGQLG+ +EN+ +P + LK + V+ I+ G
Sbjct: 39 ISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENV---YKPNCVKSLKPDKVKHIACGR 95
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ T + +Y +G NS+GQLG +P +V + Q + G + A+
Sbjct: 96 SHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAAL 155
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V WG+ +LG S + P ++ + V + G H+A
Sbjct: 156 LENGDVYVWGSNSDRQLGLNSMDD-----DSVNVSVPTIVP--IALPVLYVSCGHTHTAF 208
Query: 253 IDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
+ G +Y GDR K+ L+ +S++ +E++V CG HT L
Sbjct: 209 VTRIGDLYTCGDREYGKLGHGLWS----------LSRVDTTEKIVKVSCGANHTIALNDA 258
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
G+++ G+N+ C IG +V P + P+ Q+ CG H+A I+ GK+ G
Sbjct: 259 GKVFVCGNND--CGQIGLRNVTSQGHLYPCPITNEPIVQIVCGQSHSAFITASGKLFMCG 316
Query: 366 WG 367
G
Sbjct: 317 DG 318
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG V+ +G+ ++NI P V++IS G HS + +G ++
Sbjct: 7 IPETGAVFT-----YGKSSFADNI-----PSHFFIRNDPVIEISCGEEHSGIVCKNGRVF 56
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+GKNS GQLGLG + + P V+ L K A G ++ T V +G
Sbjct: 57 CFGKNSFGQLGLGH--TENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNS 114
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG T P + + +AG H+A + ENG VY++G
Sbjct: 115 DGQLGQ-------SVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSN 167
Query: 266 AVDKM-LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ ++ L + + S+ + +P + V+ CG HT +T G+LYT G E G LG
Sbjct: 168 SDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLG 227
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G L S RV + + +VSCG HT A+++ GK+ G
Sbjct: 228 HG----LWSLSRVD---TTEKIVKVSCGANHTIALNDAGKVFVCG 265
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 160/326 (49%), Gaps = 22/326 (6%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ V S F + + ++ CG H+ + +TG ++ G ND+GQLG+ S +P
Sbjct: 21 SRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHIS-KP 79
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
+ LK E V ++ G H+ T +++ G + GQLG G A + P+
Sbjct: 80 SCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYD 139
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG Q A G S+A+T G V +WG+ G+LG S ++ + T + P
Sbjct: 140 SGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVN--KPTKVHIPEP 197
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+K++ +AG+ HS + E+G VY+ G+ K+ + +LP
Sbjct: 198 VKQI--------SAGYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPA 249
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSC 348
V CGG+HT +L G LY GSN +G LG+G+ + LH P+ + +G + ++SC
Sbjct: 250 VHVACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISC 309
Query: 349 GWKHTAAISE-GKILTWGWGGSHGTF 373
G HTA ++E GK+ T G G HG
Sbjct: 310 GESHTAVVTESGKLYTCG-DGRHGKL 334
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 180/370 (48%), Gaps = 32/370 (8%)
Query: 2 LGRSLTA---MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
+GRS A + +++++D L G + R F ++G+ D+G+LGLG
Sbjct: 18 IGRSRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLF--VFGSNDWGQLGLGHKNH 75
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLE-P 115
+P A + + +ACG AHTL T + ++A G + GQL GIS IG S+ P
Sbjct: 76 ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISA-IGDSVNTP 134
Query: 116 LRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + SGL ++VQI+ G HHS A+T DG ++ WG N GQLGL + ++ PTKV
Sbjct: 135 VLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGL-PDVSGLVNKPTKVH 193
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
+ KQ + G+ S +T G V G SG+LG S ++ P+ +
Sbjct: 194 IPEPV--KQISAGYYHSTFLTESGLVYVCGESESGKLGIDASFS--------TQVAPKQM 243
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE 291
+L V +A G H+ + ENG +Y G + ++ L + P L+ +
Sbjct: 244 -QLPSPAVHVACGGH-HTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRN 301
Query: 292 EVV----CGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQV 346
E + CG HT V+T G+LYT G +G LG+ + + +H VQ + E V V
Sbjct: 302 ETITRISCGESHTAVVTESGKLYTCGDGRHGKLGLEENENNVHELTFVQR-YKELFVSDV 360
Query: 347 SCGWKHTAAI 356
+CG HT +
Sbjct: 361 ACGGCHTILV 370
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGL + + +P A + + +CG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P K++ G + G+ S VT G++ ++G +G+LG L
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
+ P+ + L G KVKI + G H+ + E VY FG ++ +F+
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + L V CG HT V+T G LYT+G +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 26/304 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV S G +H
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G+LY G NS GQLGLG + + T + +S T KQ + G S
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G+LG +E+ TP+ I G + + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
A + ++G +Y FG+ K+ ++P +S L ++V CGG HT +T
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
E+YT+G + G LG G+ + ++ + V+CG HTA I++ +L
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGD 323
Query: 368 GSHG 371
G HG
Sbjct: 324 GRHG 327
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + IS G H+ +T +G+LY++G N+ GQLGL
Sbjct: 19 FGKSKFAENI-----PSKFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I PT V+ L A+ G ++ T GK+ S G G+LG G S
Sbjct: 72 EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + T IK+L +AG SA + +G+++++GD + ++ ++
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGP 337
P I + CG YH+ +T GELYT+G ENG LG+ S + P+RV G
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG- 242
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTF 373
V VSCG +HT A++E ++ T+G G HGTF
Sbjct: 243 -LSGKVKIVSCGGEHTIAVTEKEVYTFGLGQFGQLGHGTF 281
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHT 300
+ G H+ + NG++Y+FG ++ + G+ +P+ + L SE+VV CG HT
Sbjct: 43 SCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKAL-KSEKVVFASCGRNHT 101
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
+ T G+LY+ G N G LG+G S + + ++ + Q+S G +AA++ +G
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDG 161
Query: 360 KILTWGWG--GSHGTFSEDGHSSGGQLDRGQ 388
K+ WG G G E +S+ ++D G+
Sbjct: 162 KLFMWGDNSEGQLGLEKEAIYSTPQKIDIGK 192
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L V+AT
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373
Query: 101 GQLGISENI 109
++ I++ +
Sbjct: 374 SEMMINDEL 382
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 155/324 (47%), Gaps = 35/324 (10%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVAVHLSCGDEHSAVVTGNNKLY--VFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVVQ 127
+K ACG HTL TE G VYATG ND GQLG+ E + L + + ++ Q
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHL--ISFFTPQHKIKQ 144
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G + S+A+T DG L+MWG NS GQ+GL +P + +G + G+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVP----HQVTTGKPVSWISCGYY 200
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S VT G++ +G +G+LG L + ++ P+L+ E+ +++A G
Sbjct: 201 HSAFVTTDGELYIFGEPENGKLG-------LPYELLSNHRIPQLVPEIPEKVIQVACGG- 252
Query: 248 LHSACIDENGRVYI----FGDRAVDKMLFQEGNHARRPSLIS-----KLPYSEEVVCGGY 298
HS + EN FG + LF+ P ++ K+ Y + CG
Sbjct: 253 EHSVVLTENDLYTFGLGKFGQLGLGTFLFE----TSEPRVVESIKGRKISY---ISCGEN 305
Query: 299 HTCVLTSGGELYTWGSNENGCLGI 322
H +LT G +YT+G +G LG+
Sbjct: 306 HAALLTDTGLMYTFGDGRHGKLGL 329
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 142/285 (49%), Gaps = 24/285 (8%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ ++G V+ FG+ +EN P + V +S G HS+ +T + +L
Sbjct: 7 LMPDSGAVFV-----FGKSKFTENT-----PGKFWFKNDVAVHLSCGDEHSAVVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y++G N+ GQLGLG K+A + PT V+ L K AA G ++ T GG V + G
Sbjct: 57 YVFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGN 114
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F S +TP+ K+K +AG SA + E+GR++++GD
Sbjct: 115 DEGQLGLGDTEERTTF-HLISFFTPQH-------KIKQLSAGSNTSAALTEDGRLFMWGD 166
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ ++ + +A P ++ + CG YH+ +T+ GELY +G ENG LG+
Sbjct: 167 NSEGQIGLPDMPNACVPHQVTTGKPVSWISCGYYHSAFVTTDGELYIFGEPENGKLGLPY 226
Query: 325 IDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKILTWGWG 367
L S R+ E P V QV+CG +H+ ++E + T+G G
Sbjct: 227 --ELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTENDLYTFGLG 269
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 28/307 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G N GQLGLG + T +S FT KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNDEGQLGLGDTEER-----TTFHLIS-FFTPQHKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G + + T+ G V + G+ H
Sbjct: 153 AALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTT-----------GKPVSWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKM--LFQEGNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
SA + +G +YIFG+ K+ ++ ++ R P L+ ++P +V CGG H+ VLT
Sbjct: 202 SAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTEN 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+LYT+G + G LG+G+ S RV + +SCG H A +++ ++
Sbjct: 262 -DLYTFGLGKFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTDTGLMYTFG 320
Query: 367 GGSHGTF 373
G HG
Sbjct: 321 DGRHGKL 327
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 17/323 (5%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG + G+L +G E S P S ++ +K ++CG HTL +T+ G +Y+ G N++
Sbjct: 7 WGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEY 66
Query: 101 GQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG S+ + + L S +V+Q + G S IT GE++ WG+N GQLG
Sbjct: 67 GELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLG 126
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
GK + + P ++ L+ Q G +A+T G++ SWG G+LG G S
Sbjct: 127 RGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHS 186
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
TP+ I L G+ + A+G HS + + V+ +G + ++ +
Sbjct: 187 F--------HDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEY 238
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P+L L + + CG HT LT G ++++G+ G LG S P+RV
Sbjct: 239 DKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRV 298
Query: 335 QGPFSESPVDQVSCGWKHTAAIS 357
S + QV+CG +HT A S
Sbjct: 299 ME-LMGSVISQVACGRRHTVAFS 320
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG++++GQL +G I P +V L + K+ + G + ++ VT GK+ S G+
Sbjct: 7 WGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEY 66
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LGH + S R+ S L+ L ++V AA G S I G V+ +G
Sbjct: 67 GELGHSKPRS-----RAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRN- 120
Query: 267 VDKMLFQEGN----HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
DK G R+P L+ L ++ CG H LT G L++WG N+ G L
Sbjct: 121 -DKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQL 179
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW-----GWG 367
G+GS H + P+ Q++ G H+ ILTW GWG
Sbjct: 180 GLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSF------ILTWSRAVFGWG 225
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL + P +C + + ++CG HT+ LT+ G V++ G FGQ
Sbjct: 224 WGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQ 283
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L V+ Q++ G H+ A + G++Y +G +GQLGLG
Sbjct: 284 LGHNSTQNEIL-PKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDT 342
Query: 161 AAKVIPIP 168
+A+ P P
Sbjct: 343 SARNSPFP 350
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 157/328 (47%), Gaps = 26/328 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P E + A+A GG +L L G V+A G N GQ
Sbjct: 841 WGENQRGQLGDGTTSARVAPGRVEGLE--GIVAVAGGGDTSLALRSDGTVWAWGANASGQ 898
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + L P RI L +V+ I+ G H+ A+ DG ++ WG N++GQLG G +
Sbjct: 899 VG-DGTVEDRLTPRRIEALS-DVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP 956
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P +V+ L G+ + A F S+AV G +WGA SG+LG G
Sbjct: 957 SL--LPARVKGLEGVGSVAAGRAF--SLAVRDDGTAWAWGANESGQLGDGSNQ------- 1005
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA---R 279
S P + ++G++ +AG H+ + E+G V+ +GD + ++ +G A
Sbjct: 1006 --SRRVPHRVASVKGLRA--VSAGAHHAMALGEDGAVWAWGDNTLGQL--GDGTSAFTVM 1059
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ--GP 337
P +++L E V G + + G ++WGSNE G LG G SP V+ G
Sbjct: 1060 WPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGS 1119
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWG 365
+ + V + G A +++G + WG
Sbjct: 1120 KARTVVTVGAWGQHAVALMADGTLQAWG 1147
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 18/297 (6%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E S +A G H+LFLT TG V+A G N GQLG ++ L P R+ L +++V +
Sbjct: 64 EPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVL-EDIVSV 122
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+G HS A+ DG ++ WG NS+GQLG G + P +VE + + A G
Sbjct: 123 VSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRA--EPQRVEGFTDVVA--VAAGDFH 178
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+ + G V +WG G+LG G + L P+ + LEGV AAGF
Sbjct: 179 SLVLKSDGTVWAWGTNFHGQLGQGHTQTGL---------WPKPVPGLEGVVAL--AAGFD 227
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+ + +G V +G + ++ P I L V G YH L G
Sbjct: 228 FTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGITSVAAGTYHAVALGKDGT 287
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
++TWGSN +G LG G+ + P + G V + G A + G +L WG
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAG--SLALLEGGDVLAWG 342
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 154/374 (41%), Gaps = 73/374 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P F + A+A G H+L L G V+A G N GQ
Sbjct: 141 WGSNSSGQLGDGTTTDRAEPQRVEGFTD--VVAVAAGDFHSLVLKSDGTVWAWGTNFHGQ 198
Query: 103 LG-------------------ISENIGYS------------------------------L 113
LG ++ G+ L
Sbjct: 199 LGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRL 258
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P RI L + ++ G +H+ A+ DG ++ WG NS+GQLG G + +P P
Sbjct: 259 SPERIPTLSG-ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP----- 312
Query: 174 LSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L G+ +A + S+A+ GG VL+WGA SG+LG G + TP L+
Sbjct: 313 LPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD---------TADRSTPSLV 363
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
EL V + G H+ + ++G ++ +G ++ P+ + L
Sbjct: 364 PELSAVTAVV--GGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTS 421
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ G +H+ G ++ WG N G LG G++ H P RV G S V V+ H
Sbjct: 422 MATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS---VRAVAAAGHH 478
Query: 353 TAAIS-EGKILTWG 365
+ A++ +G + TWG
Sbjct: 479 SIAVAMDGTVWTWG 492
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 163/411 (39%), Gaps = 97/411 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R RPV S S+ A+A GG+H L L G V+A G N GQ
Sbjct: 491 WGRNAAGQLGDGTTRDRARPVAVSGLT--SVLAIAAGGSHVLALRSDGDVWAWGYNALGQ 548
Query: 103 LGISENIGYSLEPLRISGLK---------------------------------------- 122
LG + G L P+R+ GL
Sbjct: 549 LGDGTS-GDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR 607
Query: 123 ---------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
++ IS G H+ A+ DG ++ WG N+ GQLG G + P+ +V
Sbjct: 608 LSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPV--QVRN 665
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL--------------- 218
L+GI G S+A+ G V +WG+ G G+LG G +S +
Sbjct: 666 LTGITAVSG--GRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALH 723
Query: 219 -GFLRSTSEYTPRLIK----------------------ELEGV-KVKIAAAGFLHSACID 254
G L + + + ++ ++ G+ +V+ AAG H+ +
Sbjct: 724 PGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIGRVERLAAGRAHALLVR 783
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+G V +G A ++ H R + + + V GG H+ VL G ++TWG
Sbjct: 784 ADGSVVAWGANASGQLGDGGTTHGARAVTVRGVSCARSVASGGQHSLVLACDGTVWTWGE 843
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
N+ G LG G+ +P RV+G E V G A S+G + WG
Sbjct: 844 NQRGQLGDGTTSARVAPGRVEG--LEGIVAVAGGGDTSLALRSDGTVWAWG 892
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 154/353 (43%), Gaps = 35/353 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +YG+LG G R P V + ++ + G H + L G + A G N
Sbjct: 1092 WGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNAT 1151
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG S P I G+ + V +STG HS A+ +DG ++ WG N GQLG G
Sbjct: 1152 GQLGDGTTTRRS-SPGEIRGVTR-VTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTT 1209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ +P+P V+ L + A G SVAV G V +WG G+LG G
Sbjct: 1210 TARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTWGYNTFGQLGDGT------- 1258
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S S P + +LEGV+ G HS + +G V +G A ++ +G+ R
Sbjct: 1259 --SESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQL--GDGSRTDR 1312
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + + EV G HT L G ++TWG N +G LG G V GP
Sbjct: 1313 YTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDG----------VTGPR 1362
Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
VS G AI G ++ G G F+ G +S GQL G P
Sbjct: 1363 MRLVPKPVS-GLPAATAIGAGAWHSFASGPEEGAFTW-GRNSHGQLGVGDNAP 1413
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 143/327 (43%), Gaps = 24/327 (7%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG R P E + ++ G AH+L L G V+ G N G
Sbjct: 90 WGGNSAGQLGGADTSFQRLSPARLPVLED--IVSVVSGDAHSLALGADGTVWTWGSNSSG 147
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + EP R+ G +VV ++ G HS + DG ++ WG N +GQLG G
Sbjct: 148 QLGDGTTTDRA-EPQRVEGF-TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQ 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P P V L G+ A GF+ ++AV G V SWGA G+LG G
Sbjct: 206 TGLWPKP--VPGLEGVVALAA--GFDFTLAVHADGAVSSWGANSFGQLGLGT-------- 253
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T +P I L G+ AAG H+ + ++G V+ +G + ++ N P
Sbjct: 254 -FTQRLSPERIPTLSGITS--VAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVP 310
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ + + + V + L GG++ WG+N +G LG G +P V S
Sbjct: 311 APLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVP---ELS 367
Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGG 368
V V G +H A+ + L W WGG
Sbjct: 368 AVTAVVGGAQHALALRKDGTL-WAWGG 393
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 144/324 (44%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P +A+A A +L L E G V A G N+ GQ
Sbjct: 291 WGSNSSGQLGDGTWNDRAVPAPLPGVG--GARAVASLDAGSLALLEGGDVLAWGANNSGQ 348
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P + L V + G H+ A+ DG L+ WG GQLG G
Sbjct: 349 LGDGDTADRS-TPSLVPELSA-VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSER 406
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+P V L+ + + A G S+A G V +WG G+LG G
Sbjct: 407 HVVP--ATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGT--------- 453
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T + P + L V+ +AAAG HS + +G V+ +G A ++ RP
Sbjct: 454 VTERHVPVRVPGLPSVRA-VAAAGH-HSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPV 511
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L + GG H L S G+++ WG N G LG G+ +P RV G +P
Sbjct: 512 AVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPG---LAP 568
Query: 343 VDQVSCGWKHTAAIS-EGKILTWG 365
+ V+ G + A++ +G + TWG
Sbjct: 569 IQSVAAGTYFSMALANDGTVWTWG 592
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 23/298 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ +R PV + A+A GG H++ + G V+ G N FGQ
Sbjct: 1196 WGANGFGQLGDGTTTARAVPVPVQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQ 1253
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +L P+++ L+ V ++ G HHS A+ DG + WG N++GQLG G +
Sbjct: 1254 LGDGTSESRAL-PVQVHKLEG-VQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +++ + G+ +A G +VA+ G V +WG G+LG G +
Sbjct: 1312 RYTPV--RLKDVDGLTEVRA--GAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRM---- 1363
Query: 223 STSEYTPRLI-KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
RL+ K + G+ A AG HS + +G R L N R
Sbjct: 1364 -------RLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWG-RNSHGQLGVGDNAPRA 1415
Query: 281 PSLISKLPYSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
KL +V+ GG T + +T G L +WGS+ +G LG+G + SP RV P
Sbjct: 1416 EPQRMKLLSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLLP 1473
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 141/325 (43%), Gaps = 23/325 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G R P + E ++ A+ G H L L + G ++A G GQ
Sbjct: 341 WGANNSGQLGDGDTADRSTPSLVP--ELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQ 398
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + + P + GL V ++TG HS A DG ++ WG+NS GQLG G
Sbjct: 399 LGHGGSERHVV-PATVMGLTN-VTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTE 456
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L + + A S+AV G V +WG +G+LG G
Sbjct: 457 RHVPV--RVPGLPSV--RAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDG---------- 502
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ R + V AAG H + +G V+ +G A+ ++ P
Sbjct: 503 -TTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPV 561
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + V G Y + L + G ++TWG G LG G SP V+G S
Sbjct: 562 RVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKG---LSD 618
Query: 343 VDQVSCGWKHTAAISEGKILTWGWG 367
+ +S G H A+ G W WG
Sbjct: 619 IRNISVGSAHALAV-RGDGTVWAWG 642
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 165/320 (51%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++A+ACG H +T+ G V++ G G+L G+ ++ + P + GLK V+ ++
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 363
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +HS A+T+ G+LY+WG N+ G LG G +A + +P K++ L GI + G
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQW--VPRKLDGPLEGIHVSSVSCGP 421
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 422 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISV---------SIPREVESLKGLRTMRAACG 472
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 473 VWHTAAVVEIMVGSSNSSNCSSGKLFTWGDG--DKCRLGHGDKEARLVPTCVATLVEPNF 530
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG T LT+ G++YT GS G LG D + P RV+G ++ V++++CG
Sbjct: 531 CQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML-PTRVEGKLMKNFVEELACGA 589
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 590 YHVAVLTSRTEVYTWGKGAN 609
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 151/333 (45%), Gaps = 33/333 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
WG GRLG G P + +++ +ACG H+ +T +G +Y G N +F
Sbjct: 329 WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNF 388
Query: 101 GQLGI-SENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG SE + P ++ G + V +S G H++ +T G+L+ +G + G LG
Sbjct: 389 GLLGCGSEATQWV--PRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G + + + IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 447 GDRIS--VSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGD 504
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + + L P + L A G +A + G+VY G
Sbjct: 505 KCRLGHGDKEARL---------VPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSP 555
Query: 266 AVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 556 VYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHG 615
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D +SP V+ + V + CG TAAI
Sbjct: 616 DADDRNSPSVVEA-LKDKQVKGIVCGTSFTAAI 647
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G+V SWG GRLGHG +S +
Sbjct: 295 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 345
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
P+ + L+ V++ A G HS + +G +YI+G A + L G+ A + + K
Sbjct: 346 SHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ-WVPRK 404
Query: 287 LP------YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
L + V CG +HT V+TS G+L+T+G G LG G + P V+
Sbjct: 405 LDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVES-LKG 463
Query: 341 SPVDQVSCGWKHTAAISE-------------GKILTWGWG 367
+ +CG HTAA+ E GK+ TWG G
Sbjct: 464 LRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDG 503
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
+ P+ ++ + V+ A G H+A + + G V+ +G+ ++ + P +
Sbjct: 294 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 353
Query: 287 LPY--SEEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESP 342
L E V CG YH+C +T G+LY WG N G LG GS P ++ GP
Sbjct: 354 LKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIH 413
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
V VSCG HTA + S G++ T+G GTF GH
Sbjct: 414 VSSVSCGPWHTAVVTSAGQLFTFG----DGTFGVLGH 446
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+K +S G+ H++ ITVDGEL+ WG N++GQLG G A K P +VE L
Sbjct: 1193 EKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMM 1252
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+LG E +V + + SWG G G+LGHG ST P+ I+E G K+
Sbjct: 1253 MSLGGEHTVVIDRSFHIYSWGNGKYGQLGHG---------VSTPHNLPKRIEEFAGQKIS 1303
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEE-------- 292
A G+ H+ + G ++ FG ++ L +H P+ ++
Sbjct: 1304 SIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTG 1363
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ CG H+ + TS G++Y++G+N G LG GS + P+ +QG + +++CG H
Sbjct: 1364 IFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQG-LKGKNIKRITCGPYH 1422
Query: 353 TAAISE-GKILTWGWG 367
T ++ + WG G
Sbjct: 1423 TVVTTDLDSVYCWGQG 1438
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 168/368 (45%), Gaps = 67/368 (18%)
Query: 43 WGNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN G+LG L + + + P+ + ++ + ++ GG HT+ + + +Y+ G +
Sbjct: 1218 WGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKY 1277
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + ++L P RI +++ I+TGY H+ + G+L+ +G N +GQLGL
Sbjct: 1278 GQLGHGVSTPHNL-PKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLND 1336
Query: 160 KAAKVIPIPTKVEC-----------LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+PIPT+V ++GIF G SV T G V S+GA G+
Sbjct: 1337 LKHH-LPIPTRVNTADIHHAGQPTRVTGIFC-----GHSHSVLRTSHGDVYSFGANAKGQ 1390
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S P+LI+ L+G +K G H+ + VY +G
Sbjct: 1391 LGHGSTESC---------RYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWG----- 1436
Query: 269 KMLFQEGNH------ARRPSLISKL------PYSEEVVCGGYHTCVLT-------SGGEL 309
+G H + + L+ KL E VVCG YHT LT +GG +
Sbjct: 1437 -----QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNV 1491
Query: 310 YTWGSNENGCLGIG------SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
Y GS+E+G LGIG S+D + P + S + VD S + S G +
Sbjct: 1492 YICGSSEHGKLGIGGDPRSPSLDKAY-PAIIPSINSANVVDLASGAEFNALITSNGALYM 1550
Query: 364 WGWGGSHG 371
WG G+HG
Sbjct: 1551 WG-AGTHG 1557
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 9/301 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISG 120
P+ F + K+++CG H +T G ++ G N GQLG G + P+R+
Sbjct: 1185 PMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES 1244
Query: 121 LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
LK+ ++ +S G H+ I +Y WG GQLG G +P ++E +G
Sbjct: 1245 LKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPH--NLPKRIEEFAGQKI 1302
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G+ ++ + GG + ++G+ G+LG L T T + + +
Sbjct: 1303 SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPI--PTRVNTADIHHAGQPTR 1360
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG 297
V G HS +G VY FG A ++ R P LI L + + CG
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
YHT V T +Y WG E+ CLG GS P+ V+ F V++V CG HTA ++
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVEL-FVNKRVERVVCGLYHTATLT 1479
Query: 358 E 358
+
Sbjct: 1480 Q 1480
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 134/315 (42%), Gaps = 36/315 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG YG+LG G P F + ++A G HTL L G ++A G N+ GQ
Sbjct: 1272 WGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQ 1331
Query: 103 LGISENIGYSLEPLRI-------SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG+++ + P R+ +G V I G+ HS T G++Y +G N+ GQL
Sbjct: 1332 LGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQL 1391
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P ++ L G K+ G +V T V WG G LG G
Sbjct: 1392 GHG--STESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGS-- 1447
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-----DEN--GRVYIFGDRAVD 268
+ +E P+L++ +V+ G H+A + D N G VYI G
Sbjct: 1448 -------NKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHG 1500
Query: 269 KMLFQEGNHARRPSLISKLP------YSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
K+ G R PSL P S VV G ++TS G LY WG+ +G
Sbjct: 1501 KLGI--GGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQ 1558
Query: 320 LGIGSIDVLHSPERV 334
+G G P RV
Sbjct: 1559 IGNGKNQDTWIPTRV 1573
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPF 338
P+L +++ V CG H V+T GEL+TWG+N +G LG G H +P RV+
Sbjct: 1187 PALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES-L 1245
Query: 339 SESPVDQVSCGWKHTAAISEG-KILTWGWG 367
++P+ +S G +HT I I +WG G
Sbjct: 1246 KQTPIMMMSLGGEHTVVIDRSFHIYSWGNG 1275
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 147/316 (46%), Gaps = 30/316 (9%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGEL 144
E V+A G N GQLG S P R++ + + ++ GY H+ A+T DG++
Sbjct: 6 ERSLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDV 65
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+G GQLG+G + P +V LSG + A G E S+A+T G + ++G
Sbjct: 66 LGFGNGVKGQLGIGNTDSHSNP--QRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDN 123
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
SG+LG LG + E TP+ + L K+ A G H+A + +G +++FG+
Sbjct: 124 LSGQLG-------LGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGN 176
Query: 265 RAVDKMLFQEGNHARRPSLISKLP---------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
D L G+ P +++ P + ++ CG HT LT+ G +Y WG N
Sbjct: 177 NR-DGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGEN 235
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
G LG G ++P V P S V+CG +HT A+++ + +G+G
Sbjct: 236 GRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDV-YGFG-------S 287
Query: 376 DGHSSGGQLDRGQLTP 391
D H G RG + P
Sbjct: 288 DRHGQLGLGRRGVIVP 303
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 145/314 (46%), Gaps = 24/314 (7%)
Query: 36 QRRFAALW--GNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALA---CGGAHTLFLTET 89
+R + +W G G+LG G+ +S + P AF+ + +A CG HT LT
Sbjct: 4 RRERSLVWAVGGNSKGQLGNGTPTQSSFLPCRV-AFQLAPTQRIAEVFCGYEHTFALTSD 62
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G V G GQLGI +S P R+ L K VV+++ G HS A+T G+LY +G
Sbjct: 63 GDVLGFGNGVKGQLGIGNTDSHS-NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFG 121
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N +GQLGLG P KV L Q A G + + +T G++ +G G
Sbjct: 122 DNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGA 181
Query: 209 L---GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
L GH E + P+L+ L+G V G H+ + G VY +G+
Sbjct: 182 LGVAGHANEGPPI------VASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGEN 235
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ + + PSL+ K P S V CGG HT +T ++Y +GS+ +G LG
Sbjct: 236 GRGQLGTGDTQNRYTPSLVCK-PLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294
Query: 322 IGSIDVL-HSPERV 334
+G V+ P R+
Sbjct: 295 LGRRGVIVPVPTRI 308
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 112/272 (41%), Gaps = 51/272 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+GNG G+LG+G+ +S P + +A G H+L LTE+G +YA G N GQ
Sbjct: 68 FGNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQ 127
Query: 103 LGISENIGYSLE-PLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ N + P ++ L + ++ Q++ G H++ +T GEL+M+G N +G LG+
Sbjct: 128 LGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGH 187
Query: 161 AAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A + PI P V L G Q G + +VA+T G V WG G G+LG G +
Sbjct: 188 ANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQN 247
Query: 217 ----------------------------------ILGF-----------LRSTSEYTPRL 231
+ GF R P
Sbjct: 248 RYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTR 307
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
I L G +VK G H+ G YI G
Sbjct: 308 IVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 153/325 (47%), Gaps = 22/325 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG GS +R P+ + S+ A+ G H+L L G V++ G N GQ
Sbjct: 71 WGGNNYGQLGTGS--TRQNPMPARVWRLFSITAIGAGELHSLALKSDGTVWSWGANTNGQ 128
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S+ P + GL VV I+ G+ HS + DG ++ WG N+ GQLG G
Sbjct: 129 LGDGTLISRSV-PAPVPGLTN-VVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTR 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+G+ K A G S+A+T G++ +WG G+LG G ++G R
Sbjct: 187 RLTPV--QVLGLTGV--KDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGD---LVG--R 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST+ P + V + G HS + +G V+ +G ++ P+
Sbjct: 238 STAAALPGM------TGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPT 291
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L V GG H+ L G ++ WGSN LG G+ SP +V G
Sbjct: 292 QVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKG 351
Query: 343 VDQVSCGWKHTAAISEGKILTWGWG 367
V + G H+ A+ +G W WG
Sbjct: 352 V--AAGGGLHSVAV-KGNGEVWAWG 373
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 144/288 (50%), Gaps = 27/288 (9%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L L G V++ G N++GQLG + P R+ L + I G HS A+ D
Sbjct: 58 HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPM-PARVWRLF-SITAIGAGELHSLALKSD 115
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+NGQLG G ++ +P P V L+ + A GF S+ + G V +W
Sbjct: 116 GTVWSWGANTNGQLGDGTLISRSVPAP--VPGLTNVVAIAA--GFSHSMVLKADGTVWAW 171
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G +G+LG G T TP + L G VK AAG +HS + +GR++
Sbjct: 172 GLNAAGQLGDGTP---------TRRLTPVQVLGLTG--VKDIAAGNVHSLALTADGRLWT 220
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENG 318
+G VD L G+ R S + LP VV GG H+ +L G +++WG N+ G
Sbjct: 221 WGGN-VDGQL-GTGDLVGR-STAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAG 277
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
LG+GS+ +P +V G +E + V+ G +H+ A+ +G + WG
Sbjct: 278 QLGLGSVVSTPTPTQVPG-LTE--MVAVTGGGQHSVALRVDGTVWAWG 322
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 149/325 (45%), Gaps = 23/325 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLGS+ S P + + A+ GG H++ L G V+A G N Q
Sbjct: 271 WGKNDAGQLGLGSVVSTPTPTQVPGLTE--MVAVTGGGQHSVALRVDGTVWAWGSNARAQ 328
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P +++GL + + G HS A+ +GE++ WG NS GQ+G G
Sbjct: 329 LGDGTQT-QRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLM 387
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K++P +V + + G ++A+ G WG +LG G
Sbjct: 388 KLVPTTARVL----VERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDG---------- 433
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P ++ L +V +AG HS + E+G V+ +G + + +P
Sbjct: 434 -TTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPV 492
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSES 341
+S + V G +H+ L+ G ++ WG N G LG G++ ++P RV P E
Sbjct: 493 KVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRNAPFRV--PNLEG 550
Query: 342 PVDQVSCGWKHTAAI-SEGKILTWG 365
V ++ G +H+ A+ ++G + WG
Sbjct: 551 VV-SLAAGGEHSLALKADGTVWVWG 574
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 154/332 (46%), Gaps = 30/332 (9%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG G+L R PV + +A+A G H L L G V + G N G+LG
Sbjct: 778 GQLGDGTLFPRAEPVPVIGLSE--CRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTT 835
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ + G V+ I+ G HS A+ DG + WG N GQLG G ++V+P+
Sbjct: 836 VARRAPA--VVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPV- 892
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+V+ L+G+ A GF S+A+ G V +WG G+LG LRS
Sbjct: 893 -RVQGLTGVAAIAAGDGF--SLALKHDGTVWAWGGNTLGQLGDNTT------LRS---LV 940
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
P + L GV AAG HS + +G ++ +G ++ +G AR+ P ++
Sbjct: 941 PVRTQALTGVTA--VAAGRNHSLALKGDGTLWAWGSNTYGEL--GDGTQARKLAPVQVTS 996
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
L + G +H+ +TSGG+++ WG N+ G +G G P +V G S
Sbjct: 997 LTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQVPGLTSAV---A 1053
Query: 346 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
V+ G +H+ A+ + + W WG HG + G
Sbjct: 1054 VAGGGEHSLALLSDRSV-WAWG--HGDMGQLG 1082
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 143/324 (44%), Gaps = 22/324 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G++G G+ + P + + ++ GG HTL L G + GLN Q
Sbjct: 372 WGSNSEGQVGDGTYLMKLVPTTARVLVERA--DVSAGGGHTLALKPDGTAWGWGLNAQSQ 429
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ L + V +S G +HS A+ DG ++ WG N G +G G
Sbjct: 430 LGDGTTTARPL-PVQVLNLTR-VAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALN 487
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P V+ + A G S+A++ G V +WG G+LG G +
Sbjct: 488 RSQP----VKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTP------ 537
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + LEGV V +AA G HS + +G V+++G + G R P
Sbjct: 538 --TRNAPFRVPNLEGV-VSLAAGGE-HSLALKADGTVWVWGRQDTCADPENVGRVLRVPE 593
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + V G H+ VL + G L+ WG N G L G+ +P RV G +
Sbjct: 594 QVQGLTDAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPARVDG---LTG 650
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
V S G + T A+ ++G WG
Sbjct: 651 VISFSVGSEQTLALKADGTAWAWG 674
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 133/293 (45%), Gaps = 20/293 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G+ +R P V + ++A G H+L L G V A G N GQ
Sbjct: 822 WGANAEGELGDGTTVARRAPAVVGPLA--GVLSIAVGARHSLALLGDGSVQAWGSNIQGQ 879
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+R+ GL V I+ G S A+ DG ++ WG N+ GQLG
Sbjct: 880 LGDGTTVSRVL-PVRVQGLTG-VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLR 937
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++P+ + + L+G+ A G S+A+ G G + +WG+ G LG G ++ L
Sbjct: 938 SLVPV--RTQALTGV--TAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKL---- 989
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRP 281
P + L GV AG HS + G+V+ +G ++ + N P
Sbjct: 990 -----APVQVTSLTGVSAL--DAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLP 1042
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ + L + V GG H+ L S ++ WG + G LG G ++ SP +V
Sbjct: 1043 AQVPGLTSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNLRLSPVQV 1095
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 22/293 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
WG +G +G G+ +R +PV S +L A+ A G H+L L+ G V+A G N
Sbjct: 472 WGANYWGAIGDGTALNRSQPVKVSG----TLVAMTVASGNFHSLALSVDGSVWAWGDNSL 527
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG P R+ L+ VV ++ G HS A+ DG +++WG+ +
Sbjct: 528 GQLGDGTVTPTRNAPFRVPNLEG-VVSLAAGGEHSLALKADGTVWVWGRQDT--CADPEN 584
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+V+ +P +V+ L+ +A G SV + G + +WG G+L G
Sbjct: 585 VGRVLRVPEQVQGLTDAVAVRA--GRCHSVVLRADGTLWAWGRNAEGQLADGT------- 635
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T TP + L GV + G + + +G + +G A ++ R
Sbjct: 636 --FTDRMTPARVDGLTGVISF--SVGSEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTR 691
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P+ + L V G H VL L+ WGSN G +G G++D +P R
Sbjct: 692 PTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDWQAAPVR 744
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 135/331 (40%), Gaps = 32/331 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+L G+ R P + + + G TL L G +A G N GQ
Sbjct: 623 WGRNAEGQLADGTFTDRMTPARVDGLT--GVISFSVGSEQTLALKADGTAWAWGPNAQGQ 680
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ + P ++ L +V ++ G H+ + D L+ WG N+ GQ+G G
Sbjct: 681 LGGGLSVPRT-RPTQVPTLT-DVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDW 738
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ + + G+ A + S+ + G V S GA SG+LG G L
Sbjct: 739 QAAPVRSGLAASRGL-----AAATQYSLGIALDGSVQSTGANASGQLGDGT-------LF 786
Query: 223 STSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+E P + + E + A G H + +GRV +G A ++ R P
Sbjct: 787 PRAEPVPVIGLSECRAI-----AGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRAP 841
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+++ L + G H+ L G + WGSN G LG G+ P RVQG +
Sbjct: 842 AVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGLTGVA 901
Query: 342 PV---DQVSCGWKHTAAISEGKILTWGWGGS 369
+ D S KH + W WGG+
Sbjct: 902 AIAAGDGFSLALKHDGTV-------WAWGGN 925
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 22/326 (6%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ V S F + + +++CG H+ + ++G ++ G ND+GQLG+ S +P
Sbjct: 10 SRFADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHIS-KP 68
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
+ LK E V ++ G H+ TV +++ G + GQLG G A + IP+
Sbjct: 69 SCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASIPVLVYD 128
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+G Q G S+A+T G V +WG+ G+LG S ++ + T + P
Sbjct: 129 SGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVN--KPTKVHIPEP 186
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+K++ G+ HS + ENG VY+ G+ K+ + +LP
Sbjct: 187 VKQIN--------TGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPV 238
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSC 348
V CGG+HT +LT LY GSN +G LG+G+ + LH P+ + +G + +SC
Sbjct: 239 IHVACGGHHTVILTEKDNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISC 298
Query: 349 GWKHTAAISE-GKILTWGWGGSHGTF 373
G HTA ++E GK+ T G G HG
Sbjct: 299 GESHTAILTESGKLYTCG-DGRHGKL 323
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 142/277 (51%), Gaps = 23/277 (8%)
Query: 92 VYATGLNDFGQLGISENIGY-SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
V++ G N +G+LG + S E RI L+ KE++QI G H+ +T DG+++ G
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 621
Query: 150 NSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
N NGQ G G + + + IP K++ SG A G E ++ V+ G+V + G G
Sbjct: 622 NDNGQCGQGGTARVSHLSEIP-KMD--SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 678
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDEN-GRVYIFGD 264
+LGHG +TSE P++I+ LE V++ + + H+ AC D N +Y FG
Sbjct: 679 QLGHGN---------TTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 729
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + + P + L + V CG YHT V+T+ G+ + +G N+ G LGI
Sbjct: 730 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGI 789
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
+++ +P +V+G ++ CG+ HT A+ G
Sbjct: 790 DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSG 826
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G DYG+LG R P A + ++ACG HT+ +T +G +A G ND+GQ
Sbjct: 727 FGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQ 786
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LGI + + L P+++ G ++E ++I GY+H+ A+ L+ +G+N GQLGLG+
Sbjct: 787 LGI-DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRS 845
Query: 161 AA----------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
A + ++ L G + A G ++AV+ G + +G G+LG
Sbjct: 846 NASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 905
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI------DENGR 258
G +T P I + G +V + AAGF H+ + D+N R
Sbjct: 906 TGD---------TTERVYPFPIDDFVGKRVALVAAGFYHTVVLTGGKEDDKNER 950
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 19/273 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI 105
G+LG G+ S P + + E ++ ++C HT+ E G + Y G ND+GQLG
Sbjct: 678 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGH 737
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+++I + + +++V ++ G +H+ +T G+ + +GKN GQLG+ ++
Sbjct: 738 NDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLA 797
Query: 166 PIPTK-----VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSIL 218
P+ + ECL + G+ ++A+ G + ++G G+LG G+ SS
Sbjct: 798 PVQVRGGLERQECL------EIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 851
Query: 219 GFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++ RLI ELEG + A G H+ + +NG +Y+FG ++ +
Sbjct: 852 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTE 911
Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
P I V G YHT VLT G E
Sbjct: 912 RVYPFPIDDFVGKRVALVAAGFYHTVVLTGGKE 944
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A +G DYG+LG+ ++E++ PV V E+ + CG HT+ L ++A G N
Sbjct: 776 AFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRN 835
Query: 99 DFGQLGI-----SENIGYSLEPLRISGLK-------KEVVQISTGYHHSSAITVDGELYM 146
D+GQLG+ S L+ R S + K++V+I+ G +H+ A++ +G +Y+
Sbjct: 836 DYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYV 895
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+G+N++GQLG G +V P P ++ G A GF +V +TGG +
Sbjct: 896 FGRNNHGQLGTGDTTERVYPFP--IDDFVGKRVALVAAGFYHTVVLTGGKE 944
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 33/348 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG LG G SR A ++ + + G HT+ LT G V+ G ND GQ
Sbjct: 568 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 627
Query: 104 GI--SENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + + + E P SG + G H+ ++ DG + G N GQLG G
Sbjct: 628 GQGGTARVSHLSEIPKMDSGSSQ--AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 685
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG---KVLSWGAGGSGRLGHGQESSI 217
++ +P + L + + + +V G + ++G G+LGH
Sbjct: 686 TSE--SVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHND---- 739
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ ++ L ++ A G H+ + +G+ + FG ++ +
Sbjct: 740 -----SIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMEN 794
Query: 278 ARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV------- 327
P + L E E+ CG YHT L SG L+ +G N+ G LG+G +
Sbjct: 795 QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQ 854
Query: 328 ----LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
S R+ + +++CG HT A+S+ ++ +HG
Sbjct: 855 LQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHG 902
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 152/348 (43%), Gaps = 37/348 (10%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGNGD GRLG G ++ V+ + H G H + LT G VY+ G D
Sbjct: 215 WGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHP------EGKHYMALTSEGEVYSWGNGDG 268
Query: 101 GQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG + EP + GL + VV I G +S+AIT DGEL+ WG+ + G+L
Sbjct: 269 GRLGHGDTNSRE-EPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRL 327
Query: 156 GLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G G ++ P T V L G + G Q++AVT G V SWG G G+LG G
Sbjct: 328 GHGSSEDQLTP--TLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGG 385
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S TP++I L+G + G S + + G ++ +G ++
Sbjct: 386 ---------SDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHG 436
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
H R P + L + +V G H V+T GE+Y WG N+ G LG S P
Sbjct: 437 TEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDP 496
Query: 332 ERVQGPFSESPVDQVSCG------WKHTAAISEGKILTWGWGGSHGTF 373
+ P + ++CG W T S G + + HGTF
Sbjct: 497 TLM--PLDGKSISGIACGPAQSFCWTSTGHWSVGLRVPFVVDVCHGTF 542
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 36/326 (11%)
Query: 55 SLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYS 112
S ES+ ++ S +K LK A G H + LT G VY+ G D G+LG + N+ Y
Sbjct: 174 SSESQGPQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYK 233
Query: 113 LEPLRISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
++V+ I YH H A+T +GE+Y WG G+LG G ++ P
Sbjct: 234 ---------GQKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSR--EEP 282
Query: 169 TKVECLSGI----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
T V LSG G S A+T G++ +WG G GRLGHG S
Sbjct: 283 TLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGS---------SE 333
Query: 225 SEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ TP L+ L+G +V +G + + ++G V+ +GD K+ + + P
Sbjct: 334 DQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPK 393
Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
+I +L + V CG + LT G ++TWG ++ LG G+ + + P++++G +
Sbjct: 394 IIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGK 453
Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWG 365
VD V+ G H ++ EG++ WG
Sbjct: 454 KVVD-VAVGSMHCLVMTEEGEVYGWG 478
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 157/346 (45%), Gaps = 46/346 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + +P + + ++ +ACG HT +T G +Y G ++
Sbjct: 304 WGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 363
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + +V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 364 GLLGHGNDVSHWI-PKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHG 422
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + + P +VE LSG+ T AA G + AV GK+ +WG G
Sbjct: 423 DR--ENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 480
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G V+ G
Sbjct: 481 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGS--- 528
Query: 268 DKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ Q GN P KLP EE+ CG YH VLTS E+YTWG N
Sbjct: 529 -TVYGQLGN----PYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
G LG G I+ +P V+ + V ++CG +TAAI K+++
Sbjct: 584 GRLGHGDIEDRKAPILVEA-LKDRHVKYIACGANYTAAICLHKLVS 628
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 110/252 (43%), Gaps = 37/252 (14%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ ++G K A V + +P +E + A G + VT
Sbjct: 237 GDVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 296
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG ++ PRL++ L V A G H+ +
Sbjct: 297 RQGEVFTWGEESGGRLGHGVGKDVI---------QPRLVESLAVSTVDFVACGEFHTCAV 347
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L GN P IS P V CG +HT ++TS G
Sbjct: 348 TMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISG-PLEGLQVASVTCGPWHTALVTSTG 406
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+L+T+G G LG G + + P V+ S +CG HTAA+ E
Sbjct: 407 QLFTFGDGTFGVLGHGDRENVAYPREVES-LSGLRTIAAACGVWHTAAVVEVIVTQSSSS 465
Query: 359 ---GKILTWGWG 367
GK+ TWG G
Sbjct: 466 ISSGKLFTWGDG 477
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 129/306 (42%), Gaps = 63/306 (20%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G H++ +T GE++ WG+ S G+LG G K + P VE L+ A
Sbjct: 281 DVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VGKDVIQPRLVESLAVSTVDFVA 338
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESS------------------------- 216
G + AVT G++ +WG G +G LGHG + S
Sbjct: 339 CGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWH 398
Query: 217 -------------------ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-- 255
+LG + PR ++ L G++ AA G H+A + E
Sbjct: 399 TALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVWHTAAVVEVI 458
Query: 256 ---------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHTCVLT 304
+G+++ +GD +++ + +P+ + L Y+ ++ CG T LT
Sbjct: 459 VTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLT 518
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 363
+ G ++ GS G LG D P V+ S V++++CG H A + S ++ T
Sbjct: 519 TSGHVFAMGSTVYGQLGNPYADG-KLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYT 577
Query: 364 WGWGGS 369
WG G +
Sbjct: 578 WGKGAN 583
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 254 DENGRVYIFG----DRAVDKMLFQEGNH-ARRPSLISKLPYSEEVV-------CGGYHTC 301
D G VYI+G D AV + N+ + R ++ P VV CG H
Sbjct: 234 DALGDVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACGVRHAA 293
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
++T GE++TWG G LG G + P V+ + S VD V+CG HT A++ G+
Sbjct: 294 LVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVES-LAVSTVDFVACGEFHTCAVTMAGE 352
Query: 361 ILTWGWG 367
I TWG G
Sbjct: 353 IYTWGDG 359
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 159/335 (47%), Gaps = 20/335 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT G VYA G ND
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ VV QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHELP---TKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
T P + L G+ + A G HS I ++G V+ +G ++ L E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239
Query: 279 RRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+ + L V CG + LT+ G ++T G+ G LG G P R+
Sbjct: 240 -YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVM 297
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ +G G S
Sbjct: 298 ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSS 332
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D+ +LG L ++ RP++ + + + ++CG H+L L+E G V + G ND GQL
Sbjct: 65 GSNDHSQLG-HELPTK-RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQL 122
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K
Sbjct: 123 GHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E+
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA------ 236
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 237 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
++ +L S +V CG HT L S G +Y +G +G LG S L P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ V + G HS + E G+V +
Sbjct: 66 SNDHSQLGHELPTK-----------RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L+SK ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G LG+ S D+ H P R+ P+ ++CG H+ IS+ G + WG
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAVFGWG 223
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60
Query: 361 ILTWG 365
+ G
Sbjct: 61 VYACG 65
>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
(RCC1) repeat [Roseburia intestinalis XB6B4]
Length = 1546
Score = 119 bits (299), Expect = 2e-24, Method: Composition-based stats.
Identities = 99/353 (28%), Positives = 167/353 (47%), Gaps = 43/353 (12%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG D+G++G G+ ++R++P + H + +++ G ++ +T+ G +Y G N +G
Sbjct: 762 MWGVNDFGQIGDGTTKNRYKP---TKILDHVV-SVSLGDYYSGAITQDGSLYMWGSNVYG 817
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Q+G G + + + + + V+ +S GY HS AIT DG LYMWG N +GQ+G G
Sbjct: 818 QIGD----GTTEDRYKPTKILDHVIAVSLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTE 873
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PTK+ L + +LG S A+T G + WG+ G +G G
Sbjct: 874 DRY--KPTKI--LDHVIA--VSLGVSHSGAITQDGSLYMWGSNSRGGIGDG--------- 918
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+E + K L+ V G +S I ++G +Y++G ++ +G R
Sbjct: 919 --TTEVRYKPTKILDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEI--GDGTEEDRY 972
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
L + V G H+ +T G LY WG N G +G G+ + + P ++
Sbjct: 973 KPTKILDHVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTKIL-----D 1027
Query: 342 PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
V VS G H+ AI++ G + WGW + DG G + + TP++
Sbjct: 1028 HVIAVSLGVGHSGAITQDGSLYMWGW-------NSDGQIGDGT-TKARYTPTQ 1072
Score = 114 bits (285), Expect = 9e-23, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 29/296 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG++G G+ E R++P + H + A++ G H+ +T+ G +Y G ND G
Sbjct: 810 MWGSNVYGQIGDGTTEDRYKP---TKILDHVI-AVSLGYCHSGAITQDGSLYMWGSNDSG 865
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Q+G G + + + + + V+ +S G HS AIT DG LYMWG NS G G+G
Sbjct: 866 QIGD----GTTEDRYKPTKILDHVIAVSLGVSHSGAITQDGSLYMWGSNSRG--GIGDGT 919
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+V PTK+ L + G S A+T G + WG+ G +G G E
Sbjct: 920 TEVRYKPTKI--LDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEIGDGTEED----- 970
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P I + V + G HS I ++G +Y++G ++ +G R
Sbjct: 971 ----RYKPTKILD----HVIAVSLGDDHSGAITQDGSLYMWGRNYYGEI--GDGTEEDRY 1020
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
L + V G H+ +T G LY WG N +G +G G+ ++P ++ P
Sbjct: 1021 KPTKILDHVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPTQITIP 1076
Score = 104 bits (259), Expect = 9e-20, Method: Composition-based stats.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 31/293 (10%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
+ L+ G H+ + + G +Y G+NDFGQ+G G + + + + VV +S G +
Sbjct: 742 QVLSLGDYHSGVIAQDGSLYMWGVNDFGQIG----DGTTKNRYKPTKILDHVVSVSLGDY 797
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+S AIT DG LYMWG N GQ+G G + PTK+ L + +LG+ S A+T
Sbjct: 798 YSGAITQDGSLYMWGSNVYGQIGDGTTEDRY--KPTKI--LDHVIA--VSLGYCHSGAIT 851
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG+ SG++G G + Y P I + V + G HS I
Sbjct: 852 QDGSLYMWGSNDSGQIGDGT---------TEDRYKPTKILD----HVIAVSLGVSHSGAI 898
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
++G +Y++G + + +G R L + V ++ +T G LY WG
Sbjct: 899 TQDGSLYMWGSNSRGGI--GDGTTEVRYKPTKILDHVIAVSLQTGNSGAITQDGSLYMWG 956
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
SN G +G G+ + + P ++ V VS G H+ AI++ G + WG
Sbjct: 957 SNVYGEIGDGTEEDRYKPTKIL-----DHVIAVSLGDDHSGAITQDGSLYMWG 1004
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+++ +LG S + G + WG G++G G + + Y P I +
Sbjct: 740 YSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGT---------TKNRYKPTKILD--- 787
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
V + G +S I ++G +Y++G ++ +G R L + V G
Sbjct: 788 -HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQI--GDGTTEDRYKPTKILDHVIAVSLGY 844
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
H+ +T G LY WGSN++G +G G+ + + P ++ V VS G H+ AI+
Sbjct: 845 CHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKIL-----DHVIAVSLGVSHSGAIT 899
Query: 358 E-GKILTWG 365
+ G + WG
Sbjct: 900 QDGSLYMWG 908
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 167/360 (46%), Gaps = 58/360 (16%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN G+LG G +++ P F+ + ++CGG H++ + ++ +Y+ G + +
Sbjct: 1056 WGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRY 1115
Query: 101 GQLG----ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG +N+ P +I ++V+ I+TGY H+ + G+L+ +G N +GQ
Sbjct: 1116 GQLGHGVLTPQNL-----PKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQ 1170
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
LGLG + +P+ + + GI ++ A G S+ G + SWGA G+LGH
Sbjct: 1171 LGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +I LR P+ I EL+G + + G H+ I E VY +G + M
Sbjct: 1231 G---NIEKSLR------PKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQG--EHMC 1279
Query: 272 FQEGNHARR--PSLISKLPYS--EEVVCGGYHTCVLTSG------GELYTWGSNENGCLG 321
G++ P +I E+VVCG YHT +T+ G +Y G E+G LG
Sbjct: 1280 LGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLG 1339
Query: 322 IGSIDVLHSPERVQGPFSESPVDQV------------SCGWKHTAAIS-EGKILTWGWGG 368
G ++ PF + P V S G + +A I+ G + TWG+G
Sbjct: 1340 TGG--------DLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGN 1391
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 37/264 (14%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+K+ V ++ G+ H + I+ DGEL+ WG NS GQLG G K P +VE
Sbjct: 1031 EKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIM 1090
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKV 240
+ G E SVAV ++ SWG+ G+LGHG +L T + P+ I++ G KV
Sbjct: 1091 ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHG----VL-----TPQNLPKKIEDFTGGQKV 1141
Query: 241 KIAAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQE---GNHARRPSLI 284
A G+ H+ + ++G ++ FG +RAV + G H R + I
Sbjct: 1142 LAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAI 1201
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+ G H+ + G++Y+WG+N G LG G+I+ P+++ P+
Sbjct: 1202 A---------AGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDE-LKGKPII 1251
Query: 345 QVSCGWKHTAAISE-GKILTWGWG 367
++SCG HT AISE + WG G
Sbjct: 1252 KISCGHFHTVAISELNSVYCWGQG 1275
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 147/310 (47%), Gaps = 22/310 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKE-VVQISTGY 132
++ACG H ++ G ++ G N GQLG N+G Y P R+ K ++ IS G
Sbjct: 1036 SVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGG 1095
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVA 191
HS A+ ++Y WG + GQLG G + +P K+E +G A A G+ ++
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQ--NLPKKIEDFTGGQKVLAIATGYAHTMV 1153
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLR-STSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ G + ++G SG+LG G + +R TSE I + G ++ AAG HS
Sbjct: 1154 LKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSE-----IVGIHGERITAIAAGHSHS 1208
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+NG +Y +G + ++ + RP I +L ++ CG +HT ++
Sbjct: 1209 IMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNS 1268
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-------EGKI 361
+Y WG E+ CLG GS SP+ ++ F +++V CG HTA ++ G +
Sbjct: 1269 VYCWGQGEHMCLGNGSNKNELSPKMIEF-FINKKIEKVVCGLYHTATVTAAENGSDRGNV 1327
Query: 362 LTWGWGGSHG 371
G GG HG
Sbjct: 1328 YICG-GGEHG 1336
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 42/317 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G L + P F + A+A G AHT+ L ++G ++ G ND G
Sbjct: 1110 WGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSG 1169
Query: 102 QLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG+ N P+RI + + + I+ G+ HS +G++Y WG NS GQL
Sbjct: 1170 QLGLG-NFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQL 1228
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P +++ L G + + G +VA++ V WG G LG+G
Sbjct: 1229 GHGNIEKSLRP--KQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNGS-- 1284
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI------DENGRVYIFGDRAVDK 269
+ +E +P++I+ K++ G H+A + + G VYI G K
Sbjct: 1285 -------NKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGK 1337
Query: 270 M---------LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNEN 317
+ F + + A PSL S +V G + ++T+ G LYTWG
Sbjct: 1338 LGTGGDLKTPFFDKPHPAVIPSL-----NSMNIVGFSSGSEFSAIITNNGALYTWGYGNF 1392
Query: 318 GCLGIGSIDVLHSPERV 334
G +G G + + P ++
Sbjct: 1393 GQIGNGKTEDMWLPTKI 1409
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 18/115 (15%)
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGP 337
P L+ + V CG H V++S GEL+TWG+N G LG G ++V +P RV+
Sbjct: 1025 PPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHG-LNVGKYQSTPRRVET- 1082
Query: 338 FSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
F SP+ +SCG +H+ A+ + +I +W G S GQL G LTP
Sbjct: 1083 FKSSPIIMISCGGEHSVAVDQSFQIYSW------------GSSRYGQLGHGVLTP 1125
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 154/338 (45%), Gaps = 31/338 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG GS E P + + ++ +ACG HT +T G +Y G ++
Sbjct: 116 WGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNI 175
Query: 101 GQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG ++V +S G H++ IT G+L+ +G + G LG G
Sbjct: 176 GLLGHGTDLSHWI-PKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHG 234
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + IP P +VE LSG+ T A G + AV GK+ +WG G
Sbjct: 235 NRES--IPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKH 292
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + P + L A G + + +G+V+ G+ V
Sbjct: 293 RLGHGDKEP---------RVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGN-TV 342
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
L + + P L+ + +V CG YH VLT E++TWG NG LG G I
Sbjct: 343 YGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDI 402
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
+ P V+ + V ++CG TAAI + K ++
Sbjct: 403 EDRKIPTLVE-VLRDRGVRHIACGANFTAAICQRKWMS 439
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 38/255 (14%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+ + + ++P P + + + ++ G + + V
Sbjct: 50 GDVYVWGEVICENSVRAGSDAVIRSTVRHDVLLPKPLESKLVLDVY--HVDCGVKHAALV 107
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V +WG GRLGHG + P L++ L V A G H+
Sbjct: 108 TKNGEVFTWGEESGGRLGHGSREDYI---------HPSLVESLAVSNVDFVACGEFHTCA 158
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGG 307
+ G +Y +GD + L G P IS ++V CG +HT ++TS G
Sbjct: 159 VTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTG 218
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+L+T+G G LG G+ + + P V+ S V+CG HTAA+ E
Sbjct: 219 QLFTFGDGTFGVLGHGNRESIPCPREVES-LSGLKTIAVACGVWHTAAVVEVIVTQSSSS 277
Query: 359 ---GKILTWGWGGSH 370
GK+ TWG G H
Sbjct: 278 ISSGKLFTWGDGDKH 292
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 219 GFLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+RST + L K LE + V G H+A + +NG V+ +G+ + ++
Sbjct: 70 AVIRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSR 129
Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-S 330
PSL+ L S + V CG +HTC +T+ GELYTWG ++ G LG G+ D+ H
Sbjct: 130 EDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGT-DLSHWI 188
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
P+R+ G V VSCG HTA I S G++ T+G GTF GH
Sbjct: 189 PKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFG----DGTFGVLGH 233
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 122/280 (43%), Gaps = 46/280 (16%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +GE++ WG+ S G+LG G + + P+ VE
Sbjct: 84 KPLE-SKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYI--HPSLVES 140
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + S + P+
Sbjct: 141 LAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTD---------LSHWIPKR 191
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
I LEG +V + G H+A I G+++ FGD F H R S+ P
Sbjct: 192 ISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGT-----FGVLGHGNRESI--PCPRE 244
Query: 291 EE---------VVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHS 330
E V CG +HT + G+L+TWG + LG G +
Sbjct: 245 VESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVK 304
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
P V + +++CG T + + G++ WG G +
Sbjct: 305 PTCV-ASLIDYDFHRIACGHSLTVGLTTSGQV--WGMGNT 341
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 152/303 (50%), Gaps = 26/303 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
L+CG H+ +T G +Y G ND+GQLG Y+ +P + LK E V ++ G +H
Sbjct: 40 LSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYT-KPSVVKKLKPEKVYMVACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A T G LY +G +GQLG G A+ +P +E L K A G + S A+T
Sbjct: 99 TIAATESGHLYSFGCGGDGQLGHGD--AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITE 156
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG+ G G+ G G+++ I RL L G KV++ + G+ H A +
Sbjct: 157 NGELYTWGSCGEGQNGLGEDTEI----------PTRL--HLHG-KVRMVSCGYYHMAVVT 203
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELY 310
E+G +Y+ G++ K+ S + K+ E+ V CG T V+T G +Y
Sbjct: 204 EDGSLYMCGEKEGGKLGLDH-EQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVY 262
Query: 311 TWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
T+G G LG+G S+ PER+ F + VSCG TA I++ G + T+G G
Sbjct: 263 TFGQGNQGQLGLGSSMMETEFPERIP-LFEKVKARTVSCGESFTAVITKHGNLYTFG-DG 320
Query: 369 SHG 371
HG
Sbjct: 321 RHG 323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 151/317 (47%), Gaps = 24/317 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D+G+LG G+ +S +P V + + +ACG HT+ TE+G +Y+ G GQ
Sbjct: 59 FGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQ 118
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + S P I GL ++ ++ G S+AIT +GELY WG GQ GLG+
Sbjct: 119 LGHGDAED-SHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
IPT++ + + + G+ VT G + G G+LG E L
Sbjct: 178 ----EIPTRLHLHGKV--RMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQ-----L 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
+TS+ + IK +E +V +AA G +A + +NG VY FG ++ E
Sbjct: 227 DNTSQL--QKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEF 283
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQ 335
R L K+ + V CG T V+T G LYT+G +G LG+G PE+V+
Sbjct: 284 PERIPLFEKVK-ARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVK 342
Query: 336 GPFSESPVDQVSCGWKH 352
F+ V V+CG H
Sbjct: 343 -RFNNFTVKMVTCGGCH 358
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 14/244 (5%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV +S G HS+ +T +G+LY +G N GQLG G K P+ V+ L A
Sbjct: 37 VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGN--TKSYTKPSVVKKLKPEKVYMVAC 94
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A T G + S+G GG G+LGHG + + P++I+ L+ K K A
Sbjct: 95 GRNHTIAATESGHLYSFGCGGDGQLGHGD---------AEDSHVPKIIEGLDVQKYKHLA 145
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
G SA I ENG +Y +G + G P+ + V CG YH V+T
Sbjct: 146 CGSDFSAAITENGELYTWGSCGEGQNGL--GEDTEIPTRLHLHGKVRMVSCGYYHMAVVT 203
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
G LY G E G LG+ + ++ + + E V +CG + TA +++ G + T
Sbjct: 204 EDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYT 263
Query: 364 WGWG 367
+G G
Sbjct: 264 FGQG 267
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 163/320 (50%), Gaps = 22/320 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V S+ + + LA H+L L E+G V++ G DF
Sbjct: 3382 GEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDF 3441
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ E VVQ++ G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3442 GKLG-HGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGS 3500
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
A K +P +V L G Q A G + V T G V ++G G G+LG L
Sbjct: 3501 VANK--KLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLG-------L 3551
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
G+ +T + P+ ++ + + +K G + + ++G+V++ G DR LF+E
Sbjct: 3552 GY--ATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRE-RA 3608
Query: 278 ARRPSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+P +++ L YS E++ G H LT+ G++ WG G LG+ + ++ PE +
Sbjct: 3609 VFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEII- 3667
Query: 336 GPFSESPVDQVSCGWKHTAA 355
S+ + Q+S G H+AA
Sbjct: 3668 TELSDKGIRQISTGRTHSAA 3687
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 156/328 (47%), Gaps = 41/328 (12%)
Query: 44 GNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G YGRLGLG ++ P ++ K L + HTL L ETG VY+ G D+G
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRILLDCVVK-KLSSSKGSDGHTLALAETGVVYSWGDGDYG 462
Query: 102 QLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG N +P RI+G L K + I GY HS+A+T DG+LY WG+ +G+LG G
Sbjct: 463 KLG-HGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGD 521
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
A+ +PT+V L+ + A G ++ V+ GK V S+G+G G+LG G+ +
Sbjct: 522 SNARY--VPTQVAGLAEV--GSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKV- 576
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVD 268
Y P++++ L+G+ ++ AG S + G VY +G D V+
Sbjct: 577 --------YRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGKGSADAIVN 628
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDV 327
++ E R IS G H LT E++ WG+N G G G +
Sbjct: 629 LPMYVEDLAQYRIVDIS---------AGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSP 679
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAA 355
+ P +V G + Q+S G H+ A
Sbjct: 680 ITRPLKVIG-LEGVSIRQISAGTSHSMA 706
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 145 YMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
YMWG + +GQL LG A+ +P +VE S ++ G + + G VL+ G
Sbjct: 3330 YMWGSDRHGQLAELGYSAS----VPVQVESFS--IARKIICGQNCTFVIQSDGTVLACGE 3383
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVY 260
G GRLG G + ++ +I L+G + A HS + E+G V+
Sbjct: 3384 GSYGRLGQGNSDDL---------HSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVF 3434
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+GD K+ + RRP I L + +V CG H+ V+TS G+L+T+G+ + G
Sbjct: 3435 SWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFG 3494
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHG 371
LG+GS+ PERV + QV+CG HTA +S + W +G G +G
Sbjct: 3495 KLGLGSVANKKLPERVMA-LEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYG 3547
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 154/319 (48%), Gaps = 28/319 (8%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL 121
VCSA E S + + E VY G N QL G E I L P++ S +
Sbjct: 330 VCSAVETTSESEVG--------VYEKSDVYVWGSNSSHQLAEGNQEKI---LMPVK-SKM 377
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTK 180
+V Q+ G + + AI DG + GK S G+LGLG+ + + +P ++C + + +
Sbjct: 378 FTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSS 437
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
+ + G ++A+ G V SWG G G+LGHG +T + R+ G +
Sbjct: 438 KGSDG--HTLALAETGVVYSWGDGDYGKLGHGN--------CATHKQPERITGPFLGKTI 487
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K AG+ HSA + ++G++Y +G+ ++ + N P+ ++ L V CG HT
Sbjct: 488 KYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSVACGSSHT 547
Query: 301 CVLTSGGE-LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISE 358
V++ G+ ++++GS E+G LG G + ++ P+ V+ + +V G W A +
Sbjct: 548 LVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEA-LQGLTIQKVCAGTWFSMALTTA 606
Query: 359 GKILTWGWGGSHGTFSEDG 377
G++ TWG G G S D
Sbjct: 607 GEVYTWGSGAILGKGSADA 625
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ + + RP A + + +ACG H+ +T G ++ G DFG+
Sbjct: 3436 WGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGK 3495
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG+ L P R+ L+ + Q++ G +H++ ++ DG ++ +G+ G+LGLG
Sbjct: 3496 LGLGSVANKKL-PERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYA 3554
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILG 219
K+ +P KVE + + K+ G ++ +T GKV G R+ H
Sbjct: 3555 TMKL--LPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVF---VCGIDRMPWH-------S 3602
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R + + P+++ L ++ A G H + G+V +G ++ + R
Sbjct: 3603 LFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVR 3662
Query: 280 RPSLISKL 287
P +I++L
Sbjct: 3663 HPEIITEL 3670
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G +R+ P + + + ++ACG +HTL +++ G V++ G + G
Sbjct: 509 WGEGDHGRLGHGDSNARYVPTQVAGLAE--VGSVACGSSHTLVVSKDGKTVWSFGSGEHG 566
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG E +G P + L+ +Q + G S A+T GE+Y WG S LG G
Sbjct: 567 KLGTGE-LGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG--SGAILGKG-S 622
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ +P VE L+ + G +A+T +V +WG G+ G G S +
Sbjct: 623 ADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPIT- 681
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P + LEGV ++ +AG HS
Sbjct: 682 -------RPLKVIGLEGVSIRQISAGTSHS 704
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 18/228 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ + +P + F ++K + G H+ +T+ G +Y G D G
Sbjct: 456 WGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHG 515
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGK 159
+LG + N Y P +++GL EV ++ G H+ ++ DG+ ++ +G +G+LG G+
Sbjct: 516 RLGHGDSNARYV--PTQVAGL-AEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGE 572
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P VE L G+ ++ G S+A+T G+V +WG+G LG G +I+
Sbjct: 573 LGK--VYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI--LGKGSADAIVN 628
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
P +++L ++ +AG H + + V+ +G ++
Sbjct: 629 L--------PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSM 668
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G++G+LG G L +RP V A + +++ + G ++ LT G VY G
Sbjct: 560 FGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILG 619
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G ++ I P+ + L + +V IS G +H A+T + E++ WG NS GQ G G
Sbjct: 620 KGSADAIVNL--PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTC 677
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ I P KV L G+ +Q + G S+A T
Sbjct: 678 SP-ITRPLKVIGLEGVSIRQISAGTSHSMAWTS 709
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 192/411 (46%), Gaps = 72/411 (17%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLG------------LGS 55
A+ KY + Q I GS C I+ + + + WG+ +LG S
Sbjct: 90 ALEKYNINQVI-CGSDQTFC---ITKSPENHVFS-WGSNQNAKLGHSYYKPSPNNVSSSS 144
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFGQLGISENIGYSLE 114
++ +P + A E + L+CG +H+ + E+G VY GL G+LG +EN G E
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLG-NENEGVVQE 203
Query: 115 P-----LRIS-GLKKEVVQISTGYHHSSAI----------TVDGELYMWGKNSNGQLGLG 158
P L+I+ +K +V+QIS G +H+ A+ T +L++WG N QLG+
Sbjct: 204 PQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMD 263
Query: 159 KKAA----------------KVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVL 199
+A ++ P P + + + ++ Q + S A+T G V
Sbjct: 264 NQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVY 323
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG+G GRLG ++ + P+++KEL G +V + G+ H A I E G+V
Sbjct: 324 TWGSGEFGRLG---------YMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQV 374
Query: 260 YIFGDRAVDKML----FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+ +G R ++ L + R S + + + ++ CG HT LT+ GE+Y+WG
Sbjct: 375 FSWG-RGINGQLGHGSVLNEDQVRPVSALQNI-HIIDISCGESHTLALTNKGEVYSWGGG 432
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+ +G D L ++ E + Q+S G +H++A++ +GK+ TWG
Sbjct: 433 Q--LGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALTDDGKLFTWG 481
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 50/317 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFL----------T 87
WG G GRLG + P V + K + ++CG HTL L T
Sbjct: 185 WGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGET 244
Query: 88 ETGCVYATGLNDFGQLGISE---------------NIGYSLEPLRIS------GLKKEVV 126
++ G ND QLG+ ++ + L+P +++
Sbjct: 245 SQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI 304
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ Y++S+A+T +G +Y WG G+ G LG K P P ++ L+G + +LG
Sbjct: 305 GVHASYYYSAALTSNGNVYTWGS---GEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLG 361
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ A+T G+V SWG G +G+LGHG S+L +E R + L+ + + +
Sbjct: 362 YYHGAAITEQGQVFSWGRGINGQLGHG---SVL------NEDQVRPVSALQNIHIIDISC 412
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
G H+ + G VY +G + ++ + P ++ L + ++ G H+ LT
Sbjct: 413 GESHTLALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALT 472
Query: 305 SGGELYTWGSNENGCLG 321
G+L+TWGSNE G LG
Sbjct: 473 DDGKLFTWGSNEYGQLG 489
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 147/359 (40%), Gaps = 68/359 (18%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTET--GCVYATGLNDFGQLGIS-----------E 107
RP A EK+++ + CG T +T++ V++ G N +LG S
Sbjct: 84 RPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSS 143
Query: 108 NIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVI 165
+I +P + L+ + + +S G HS A + + G +Y WG NG+ LG + V+
Sbjct: 144 SIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGR--LGNENEGVV 201
Query: 166 PIPTKVECLS-----GIFTKQAALGFEQSVAV----------TGGGKVLSWGAGGSGRLG 210
P +ECL + Q + G ++A+ T K+ WG +LG
Sbjct: 202 QEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLG 261
Query: 211 ---------------------HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
H + Y+ +LI GV A + +
Sbjct: 262 MDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI----GVH-----ASYYY 312
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGG 307
SA + NG VY +G ++ + + +P ++ +L + G YH +T G
Sbjct: 313 SAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQG 372
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
++++WG NG LG GS VL+ + R + +SCG HT A++ +G++ +W
Sbjct: 373 QVFSWGRGINGQLGHGS--VLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSW 429
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 292 EVVCGGYHTCVLTSGGE--LYTWGSNENGCLG------------IGSIDVLHSPERVQGP 337
+V+CG T +T E +++WGSN+N LG SI ++ P V+
Sbjct: 98 QVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVKA- 156
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+D +SCG H+ A S L +GWG
Sbjct: 157 LENQKIDGLSCGTSHSFAWSNESGLVYGWG 186
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 166/334 (49%), Gaps = 29/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG + + FE H ++K ++ HTL T G V++ G D
Sbjct: 438 GKGSYGRLGLGD-SNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 496
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 497 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 556
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP T V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 557 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 612
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 613 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 662
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
A RP LI +L + ++ G H L+ E+Y WG+N G G G S + P++V
Sbjct: 663 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 722
Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
G + Q+S G H TA + +++ W
Sbjct: 723 VG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 377 VVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAATFADAQTIEAGQYCTFVISSDG 432
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 433 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSW 492
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 493 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 543
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 544 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 603
Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
LG G + ++ P E +QG F + +V G + + A+ S G++ WG G G
Sbjct: 604 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLG 655
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 653
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 654 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 713
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 714 GPITK-PKKVVGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT T+ GE+++WG + G LG G+ P+ +QGP V VS G++H+AA+SE
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 538
Query: 359 -GKILTWGWGGSHGTFSEDGH 378
G++ TWG G F GH
Sbjct: 539 DGELYTWG----EGDFGRLGH 555
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 162/335 (48%), Gaps = 20/335 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE---KHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +G+LGLG +E+ + ++ S E ++ +ACG HTLFLT G VYA G ND
Sbjct: 6 WGDASHGQLGLGGIENE-QILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNND 64
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + PL I L+ VV QI+ G HS A+T G++ WG N GQ+G
Sbjct: 65 HHQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-H 120
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
VI +P + L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 121 STDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL- 179
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P + + G+ + A G HS I ++ V+ +G ++ + +
Sbjct: 180 -----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234
Query: 279 RRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
PS + + V CG ++ LT+ G ++T G+ G LG G+ + P R+
Sbjct: 235 AYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIP-RMVI 293
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ ++G G S
Sbjct: 294 ELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS 328
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 20/301 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D+ +LG L ++ RP+ + + + +ACG H++ LTE G + + G ND GQ+
Sbjct: 61 GNNDHHQLG-HELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118
Query: 104 GIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G S +N L + + + VVQI+ G +HS A+T GELY WG N GQLG+ ++
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSP 176
Query: 163 KVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P P ++ + GI A G S ++ V WG G+LG E
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ---- 232
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P +K + + V+ G +S + G V+ G ++ N+
Sbjct: 233 -----NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEM 287
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P ++ +L S +V CG HT L SGG +Y++G +G LG + P+ V G
Sbjct: 288 IPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIG 347
Query: 337 P 337
P
Sbjct: 348 P 348
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 114/251 (45%), Gaps = 23/251 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG S+GQLGLG + I +P+++E +Q A G ++ +T G+V + G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LGH + P I EL+ V A G HS + E G++ +G
Sbjct: 63 NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
D ++ N I + S VV CG H+ LTS GELY+WGSN G L
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171
Query: 321 GIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG----GSHGTF 373
G+ S D+ HS P R+ P+ ++CG H+ IS+ + +GWG G G
Sbjct: 172 GVQSPKDLPHSNAPLRLTTILG-IPLATIACGGNHSFLISKSSAV-FGWGKNTCGQLGLN 229
Query: 374 SEDGHSSGGQL 384
E + QL
Sbjct: 230 DEQNRAYPSQL 240
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL ++R P + ++ + CG +++FLT G V+ G ++GQ
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + + + I + + Q++ G H+ A+ G +Y +G ++GQLG
Sbjct: 278 LGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTI 337
Query: 162 AKVIP 166
++ +P
Sbjct: 338 SQTLP 342
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 175/403 (43%), Gaps = 71/403 (17%)
Query: 43 WGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G LG G +E W P+ + +K +A G H+L LTE G V + GLND G
Sbjct: 572 WGANSDGVLGHTGGIEQLW-PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQG 630
Query: 102 QLGI-------SENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
Q G S ++ P I KK VV I+ G +HS+ +T DGELY +G+
Sbjct: 631 QCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG 690
Query: 151 SNGQLG------LGK------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
QLG LG+ + + P PT++ L+G KQ A G S V
Sbjct: 691 GEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACV 750
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI---AAAGFLH 249
T G + +WG G +G+LGHG T + TP+ ++ G+K KI A G H
Sbjct: 751 TEEGALYTWGRGANGQLGHGD---------MTDQATPKRVE--AGIKDKIMVKVACGENH 799
Query: 250 SACIDENGRVYIFGDRAVDKM---------LFQEG-------NHARRPSLISKLPYSE-- 291
SA +D G +Y G ++ EG R P+ +S L
Sbjct: 800 SAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQ 859
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
++ CG +T+ G LYTWG + LG+G + P + S V V+CG
Sbjct: 860 FVDIACGHGFCAAITNRGLLYTWG--KGTALGLGPSGDVSEPTHLS---SIDGVVSVACG 914
Query: 350 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
H AA+++ L + WG S DG S+ G +L P+
Sbjct: 915 DIHAAALTDKGQL-YMWGSSEAGRLGDGRSTEGVTRTPKLVPA 956
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 142/337 (42%), Gaps = 43/337 (12%)
Query: 58 SRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG------ 110
+R RP+V K ++ ++A GG H+ +T G +Y G QLG +
Sbjct: 649 ARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708
Query: 111 -------------YSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ +P R+S L +VV Q++ G HS+ +T +G LY WG+ +NGQLG
Sbjct: 709 ALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLG 768
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE-- 214
G + P + I K A G S AV G + + G SG+LG G E
Sbjct: 769 HGDMTDQATPKRVEAGIKDKIMVK-VACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWI 827
Query: 215 -----SSILGFLRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAV 267
G S E P + L V+ A G A I G +Y +G +
Sbjct: 828 CATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWG-KGT 886
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID- 326
L G+ P+ +S + V CG H LT G+LY WGS+E G LG G
Sbjct: 887 ALGLGPSGD-VSEPTHLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTE 945
Query: 327 -VLHSPERVQGPFSESPVDQVSC-----GWKHTAAIS 357
V +P+ V F++ + Q C G +H AIS
Sbjct: 946 GVTRTPKLVPA-FAD--IHQARCLGVSIGPRHALAIS 979
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
IS+ SL L + LK + + Y+ + G + WG NS+G LG ++
Sbjct: 531 ISKQNMTSLHLLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQL 589
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSILG 219
P+ +E LS + K A G S+ +T G+V S+G G+ G + S +
Sbjct: 590 WPLA--IESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAA 647
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVD-- 268
R P +++ V IAA G+ HSA + +G +Y FG D +
Sbjct: 648 VARPRPIVLPDDLRK--KTVVSIAAGGY-HSALVTADGELYTFGRGGEFQLGHDTVMALG 704
Query: 269 ---KMLFQEGNHAR------RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
L N A+ +P+ +S L ++V CG +H+ +T G LYTWG N
Sbjct: 705 EGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGAN 764
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G LG G + +P+RV+ + + +V+CG H+AA+ S G I T G
Sbjct: 765 GQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTG 813
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
WG+ + G+LG+G+ + P S +KA++ G G H++ LTE G V+ G ND G
Sbjct: 108 WGSNENGQLGIGTTADKNVPTPVSGLS--GIKAISGGLGYHSMALTENGTVWTWGKNDNG 165
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + + P+ + GL +V I+ G ++S A+ DG ++ WG N NG+LG G
Sbjct: 166 ELGNGTTVQQN-SPVLVIGLS-DVTAIAAGGYYSLALKSDGTIWAWGANGNGELGDGTIV 223
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P+ +V LS + A G S+A+ G V +WG G LG G
Sbjct: 224 DKHTPV--QVSGLSDVIAITA--GGSHSLAIKQDGTVWAWGINMYGTLGDGTR------- 272
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P ++ L+ +K A G HS +D+ G V+ +GD + ++ + P
Sbjct: 273 --TNRTIPVKVRNLQ--HIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTP 328
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
++ + + ++ GG+H+ L G ++ WG N +G +G G+ + ++P + +
Sbjct: 329 EQLTGIEHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRNDRNAPALTKAVLDTT 388
Query: 342 PVD 344
D
Sbjct: 389 APD 391
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 28/329 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD G++G + +R PV + + + G T+ L G V+ G N+ G
Sbjct: 57 VWGQGDRGQIGDAAWNARNTPVQARGL--NDVMDIHTGVRSTMALRSDGTVWTWGSNENG 114
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLGI ++ P +SGL + IS G +HS A+T +G ++ WGKN NG+LG G
Sbjct: 115 QLGIGTTADKNV-PTPVSGLSG-IKAISGGLGYHSMALTENGTVWTWGKNDNGELGNGTT 172
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V LS + T AA G+ S+A+ G + +WGA G+G LG G
Sbjct: 173 VQQNSPV--LVIGLSDV-TAIAAGGY-YSLALKSDGTIWAWGANGNGELGDGT------- 221
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++TP + L V + I A G HS I ++G V+ +G + +G R
Sbjct: 222 --IVDKHTPVQVSGLSDV-IAITAGGS-HSLAIKQDGTVWAWGINMYGTL--GDGTRTNR 275
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L + + + GG+H+ L G ++ WG N G LG+G +PE++ G
Sbjct: 276 TIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTPEQLTG-- 333
Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWG 367
E +D G+ A +G++ WGWG
Sbjct: 334 IEHVLDIAGGGFHSAALKKDGRV--WGWG 360
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 20/242 (8%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALG 185
++ GY+H++++ G++Y+WG+ GQ+G A+ P+ + + + I T G
Sbjct: 38 KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIHT-----G 92
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ G V +WG+ +G+LG G + + P + L G+K
Sbjct: 93 VRSTMALRSDGTVWTWGSNENGQLGIGT---------TADKNVPTPVSGLSGIKAISGGL 143
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G+ HS + ENG V+ +G ++ P L+ L + GGY++ L S
Sbjct: 144 GY-HSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDVTAIAAGGYYSLALKS 202
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
G ++ WG+N NG LG G+I H+P +V G S V ++ G H+ AI + + W
Sbjct: 203 DGTIWAWGANGNGELGDGTIVDKHTPVQVSGL---SDVIAITAGGSHSLAIKQDGTV-WA 258
Query: 366 WG 367
WG
Sbjct: 259 WG 260
>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
protein 1-like [Metaseiulus occidentalis]
Length = 550
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 17/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ Y ++G PV+ F++ + +ACGG H++ T +G VY G N+ GQ
Sbjct: 121 WGHNGYSQVGNDQNSQANSPVL--VFDRQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQ 178
Query: 103 LGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+S ++ + P ++ G E+ IS G++ ++A+ GE+Y+WG N NGQLGLG
Sbjct: 179 LGLSASVNHQ-SPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWGSNGNGQLGLGSL 237
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P K+E L +F K+ A GF ++A+T G V WGA G+LG +
Sbjct: 238 TNQ--PFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENK------ 289
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
T++ P L+K + G ++AA + SA + E +V ++G
Sbjct: 290 ---TNQSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWG 330
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 145/312 (46%), Gaps = 26/312 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G+ G LG+G S P K +++ ACG G H L LT G VY G N + Q
Sbjct: 69 GSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQ 128
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G +N + P+ + ++ V QI+ G +HS TV G +Y WG+N+ GQLGL
Sbjct: 129 VGNDQN-SQANSPVLVFD-RQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVN 186
Query: 163 KVIPIPT-----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +++C +GI + G + AV G+V WG+ G+G+LG
Sbjct: 187 HQSPRKVGGAIAEMKC-TGI-----SCGHNFTTAVFDTGEVYVWGSNGNGQLG------- 233
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
LG L T++ P I++L+ V +K A GF H+ + + G VY++G A+ ++ + +
Sbjct: 234 LGSL--TNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENKTN 291
Query: 278 ARRPSLISKLP-YSEEVVCGGYH--TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P L+ + EV Y+ + +T ++ WG + + + S V
Sbjct: 292 QSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWGLCRGQHVTVPTETPFDSVHDV 351
Query: 335 QGPFSESPVDQV 346
FS PV V
Sbjct: 352 FVAFSSVPVTPV 363
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 40/298 (13%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITV 140
L +TE V+A G N G LGI + L P ++ GL K+ VQ TG H A+T
Sbjct: 57 LLVTEEDEVWAMGSNAAGCLGIGDTRS-CLSPTKVEGLSKKGVQSFACGTG-PHVLALTA 114
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA----ALGFEQSVAVTGGG 196
GE+Y WG N Q+G + + P+ +F +Q A G SV T G
Sbjct: 115 RGEVYGWGHNGYSQVGNDQNSQANSPVL--------VFDRQPVAQIACGGYHSVIRTVSG 166
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDE 255
V +WG G+ LG S + +PR + + +K + G + + +
Sbjct: 167 GVYTWGQNNCGQ---------LGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFD 217
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
G VY++G ++ + P I +L + ++V CG HT LT G +Y WG
Sbjct: 218 TGEVYVWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWG 277
Query: 314 SNENGCLGI-----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+N G LG SI VL + + G +E Q + + +AA++E K+L WG
Sbjct: 278 ANALGQLGTENKTNQSIPVLM--KTIHGRINEVAATQYN---QTSAAMTETSKVLMWG 330
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 27/219 (12%)
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L +F+ A +++ VT +V + G+ +G LG G S L +P ++
Sbjct: 45 LCCVFSSSAT----EALLVTEEDEVWAMGSNAAGCLGIGDTRSCL---------SPTKVE 91
Query: 234 ELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
L V+ A G H + G VY +G ++ + + A P L+ +
Sbjct: 92 GLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQVGNDQNSQANSPVLVFDRQPVAQ 151
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
+ CGGYH+ + T G +YTWG N G LG+ + SP +V G +E +SCG
Sbjct: 152 IACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCGHNF 211
Query: 353 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
T A+ + G++ WG G+ GQL G LT
Sbjct: 212 TTAVFDTGEVYVWGSNGN------------GQLGLGSLT 238
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G+LGLGSL ++ PV + +K +ACG +HTL LT+ G VY G N G
Sbjct: 223 VWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALG 282
Query: 102 QLGISENIGYSLEPLR--ISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLG 158
QLG S+ L I G EV +T Y+ +S A+T ++ MW GL
Sbjct: 283 QLGTENKTNQSIPVLMKTIHGRINEVA--ATQYNQTSAAMTETSKVLMW--------GLC 332
Query: 159 KKAAKVIPIPTKVECLSGIFT 179
+ +P T + + +F
Sbjct: 333 RGQHVTVPTETPFDSVHDVFV 353
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 21/297 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G R P + + + + G H++ +TE G V+ G N +GQ
Sbjct: 169 WGNNPSGQLGNGQRTQRNAPTRVRGLNQ--VVSASAGAEHSVAVTEDGSVWTWGSNAYGQ 226
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N ++ P+++ G+ +VV ++ + A+ DG ++ WG NS+G+LG G
Sbjct: 227 LGDGTNTLRAV-PVQVPGMS-DVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTH 284
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++PI +V LSG+ A G ++AV G SWG G+LG G + L LR
Sbjct: 285 SLLPI--QVPNLSGV--TNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDG---TTLNRLR 337
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P L+ L GV+ + G +H+ + +G + +G + ++ ++ P
Sbjct: 338 ------PVLVAGLTGVRAL--SGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPV 389
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
++ L + E+ GGYHT G LY WG N G LG G+ P VQ P S
Sbjct: 390 QVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVP--VQVPLS 444
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 144/296 (48%), Gaps = 24/296 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ G LG G+ R P VV S K A G AH++ L G V+ G N +
Sbjct: 474 WGHNTNGELGDGTTTQRTSPTAVVVSGIVK-----TAGGSAHSVALGAGGAVWTWGYNAY 528
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + + P ++ G+ V+ ++ G +H+ A++ DG + WG N+ GQLG G
Sbjct: 529 GQLG-NGTTTQVVTPTQLPGMSG-VIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTT 586
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ P V L G+ A G +VA+ G V +WG+ G+LG G
Sbjct: 587 ANQLTP--QSVPELDGVTAISA--GSTHTVALKADGTVWAWGSNLYGQLGDG-------- 634
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T +P + LE V V IAA G H+ + +G ++++G ++ +
Sbjct: 635 -TFTHRSSPVQVPSLENV-VSIAA-GHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV 691
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P +S L ++ + GGYHT L + G+++TWG N +G LG +I +SP V G
Sbjct: 692 PVQVSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPG 747
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 129/284 (45%), Gaps = 19/284 (6%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
HTL + G ++A G N GQLG + + P R+ GL +VV S G HS A+T D
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRN-APTRVRGL-NQVVSASAGAEHSVAVTED 213
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+ GQLG G + +P+ +V +S + AA ++VA+ G V +W
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTLRAVPV--QVPGMSDVVAVAAA--GSRTVALKADGTVWTW 269
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SG LG G +T P + L G V AAG H+ + ++G +
Sbjct: 270 GINSSGELGDG---------TTTHSLLPIQVPNLSG--VTNIAAGLWHTLAVKKDGSAWS 318
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+G+ A ++ + RP L++ L + G HT L G + WG N G LG
Sbjct: 319 WGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLG 378
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
G+ P +V +D + G+ A +G + WG
Sbjct: 379 NGTTTNSSIPVQVAALTQAVEID--AGGYHTLARRQDGTLYAWG 420
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 131/289 (45%), Gaps = 19/289 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ P + +A G HT+ L+ G V A G N +GQ
Sbjct: 523 WGYNAYGQLGNGTTTQVVTPTQLPGMS--GVIDVAAGVNHTVALSADGTVAAWGYNAYGQ 580
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P + L V IS G H+ A+ DG ++ WG N GQLG G
Sbjct: 581 LG-NGTTANQLTPQSVPELDG-VTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTH 638
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L + + A G +VAV G G + WG G G+LG G
Sbjct: 639 RSSPV--QVPSLENVVSIAA--GHFHTVAVKGDGTLWVWGYGPQGQLGLG---------T 685
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T++ P + L G V IAA G+ H+ + NG+V+ +G + ++ P
Sbjct: 686 TTNQSVPVQVSGL-GHAVAIAAGGY-HTVALLANGQVWTWGYNSSGQLGDATIIQRYSPV 743
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
L+ L + GGY T VL G ++ +G N NG LG G+ SP
Sbjct: 744 LVPGLTNVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSP 792
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 24/296 (8%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
A WG YG+LG G+ ++ P S E + A++ G HT+ L G V+A G N +
Sbjct: 571 AAWGYNAYGQLGNGTTANQLTP--QSVPELDGVTAISAGSTHTVALKADGTVWAWGSNLY 628
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + P+++ L+ VV I+ G+ H+ A+ DG L++WG GQLGLG
Sbjct: 629 GQLG-DGTFTHRSSPVQVPSLEN-VVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTT 686
Query: 161 AAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P+ +SG+ A A G +VA+ G+V +WG SG+LG +++I+
Sbjct: 687 TNQSVPVQ-----VSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATII- 737
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y+P L+ L V + +AA G+ +A + +G V+ FG ++ +G
Sbjct: 738 -----QRYSPVLVPGLTNV-IALAAGGYT-TAVLKRDGTVWAFGYNPNGQL--GDGTTTS 788
Query: 280 RPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
R S + L S ++ G H L + G N G LG G+ +P +V
Sbjct: 789 RSSPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQV 844
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 35/333 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ R PV + A+A G+ T+ L G V+ G+N G+
Sbjct: 219 WGSNAYGQLGDGTNTLRAVPVQVPGMSD--VVAVAAAGSRTVALKADGTVWTWGINSSGE 276
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +SL P+++ L V I+ G H+ A+ DG + WG N+ GQLG G
Sbjct: 277 LGDGTTT-HSLLPIQVPNLSG-VTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLN 334
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ V L+G+ + + G +VA+ G WG +G+LG+G
Sbjct: 335 RLRPV--LVAGLTGV--RALSGGVVHTVALKWDGTAWGWGYNSAGQLGNG---------T 381
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ P + L V+I A G+ H+ ++G +Y +GD + GN S
Sbjct: 382 TTNSSIPVQVAALT-QAVEIDAGGY-HTLARRQDGTLYAWGDNFYGAL--GTGN-TTSSS 436
Query: 283 LISKLPYSEEVVCG-GYHTCV-------LTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ ++P S G GY+ V + L+ WG N NG LG G+ SP V
Sbjct: 437 VPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAV 496
Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
S + + + G H+ A+ + G + TWG+
Sbjct: 497 ----VVSGIVKTAGGSAHSVALGAGGAVWTWGY 525
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 129/283 (45%), Gaps = 39/283 (13%)
Query: 120 GLKKEVVQ--------ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
G+ +EV++ +S G +H+ + G L+ WG N +GQLG G++ + PT+V
Sbjct: 134 GITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQR--NAPTRV 191
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G E SVAVT G V +WG+ G+LG G + LR+ P +
Sbjct: 192 RGLNQVVSASA--GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNT-----LRAVPVQVPGM 244
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
V +AAAG + + +G V+ +G + ++ H+ P + L
Sbjct: 245 SD-----VVAVAAAGS-RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVT 298
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+ G +HT + G ++WG+N G LG G+ P V G + V +S G
Sbjct: 299 NIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAG---LTGVRALSGGVV 355
Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
HT A+ +G WGW G++S GQL G T S
Sbjct: 356 HTVALKWDGT--AWGW----------GYNSAGQLGNGTTTNSS 386
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ R+ PV+ + ALA GG T L G V+A G N GQ
Sbjct: 723 WGYNSSGQLGDATIIQRYSPVLVPGLTN--VIALAAGGYTTAVLKRDGTVWAFGYNPNGQ 780
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S + L VV +S+G +H + D + G NS GQLG G
Sbjct: 781 LGDGTTTSRSSP---TATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQ 837
Query: 163 KVIPIPTKVECLSG 176
+ P P +V L G
Sbjct: 838 R--PTPVQVTNLPG 849
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 259 VYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
V+ F +A ++ GN A+ R L + + + V G YHT + SGG L+ WG+
Sbjct: 112 VHSFVVKASPMIIDSNGNRAKCGITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGN 171
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
N +G LG G ++P RV+G + V S G +H+ A++E G + TWG
Sbjct: 172 NPSGQLGNGQRTQRNAPTRVRG---LNQVVSASAGAEHSVAVTEDGSVWTWG 220
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVAVHLSCGDEHSAVVTGNNKLY--VFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG ND GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL +P + G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTI----GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG E +L R P+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYIFGESENGKLGLPNE--LLSNHR-----IPQLVPEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCV 302
S + E+ VY FG + +LF+ P ++ + + CG H +
Sbjct: 255 SVVLTEDA-VYTFGLGQFGQLGLGTLLFE----TSEPKVVENIGNKTISYISCGENHAAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
LT G +YT+G +G LG+G
Sbjct: 310 LTDNGLMYTFGDGRHGKLGLG 330
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 138/270 (51%), Gaps = 19/270 (7%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ I+ENI P + V +S G HS+ +T + +LY++G N+ GQLGLG
Sbjct: 17 FGKSKIAENI-----PGKFWFKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+A + PT V+ L K AA G ++ T GG V + G G+LG G
Sbjct: 72 KSA--VSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTT 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F R + + IK+L +AG SA + E+GR++++GD + ++ +A
Sbjct: 130 FHRVSFFTSQHKIKQL--------SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNAC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P ++ + CG YH+ +T+ GELY +G +ENG LG+ + L S R+
Sbjct: 182 VPHQVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLP--NELLSNHRIPQLVP 239
Query: 340 ESP--VDQVSCGWKHTAAISEGKILTWGWG 367
E P V QV+CG +H+ ++E + T+G G
Sbjct: 240 EIPEKVIQVACGGEHSVVLTEDAVYTFGLG 269
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 145/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G N GQLGLG + T +S FT KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNDEGQLGLGDTEER-----TTFHRVS-FFTSQHKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G + L + + + G V + G+ H
Sbjct: 153 AALTEDGRLFMWGDNSEGQIG------LPNILNACVPHQVTI-----GKPVSWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + +G +YIFG+ K+ L E NH R P L+ ++P +V CGG H+ VLT
Sbjct: 202 SAFVTTDGELYIFGESENGKLGLPNELLSNH-RIPQLVPEIPEKVIQVACGGEHSVVLTE 260
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
+YT+G + G LG+G++ S +V + +SCG H A +++ ++
Sbjct: 261 DA-VYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMYTF 319
Query: 366 WGGSHG 371
G HG
Sbjct: 320 GDGRHG 325
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +C F K +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVF 364
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G RP + +++ +ACG HT ++ +G ++ G ++
Sbjct: 288 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 347
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R+SG + +V+ ++ G HS+ T +G+L+ +G + G LG G
Sbjct: 348 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 406
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
+ + +P P +V+ LSG+ T + A G + A+ K+ +WG G R
Sbjct: 407 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 464
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G A
Sbjct: 465 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 515
Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN R P L+ KL + EE+ CG YH VLTS E++TWG NG LG
Sbjct: 516 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 571
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G + SP V+ + V +SCG TA+I
Sbjct: 572 GDTEDRRSPTFVEA-LKDRNVKSISCGSNFTASI 604
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 168 PTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P +E L ++ + A G VT G+V +WG GRLGHG ++ F R
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND---FSR---- 306
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P L++ L V A G H+ + +G ++ +GD + L G P +
Sbjct: 307 --PHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRV 364
Query: 285 SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
S +V+ CG +H+ + TS G+L+T+G G LG G + + P VQ S
Sbjct: 365 SGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQI-LSGL 423
Query: 342 PVDQVSCGWKHTAA-----------ISEGKILTWGWGGSH 370
+V+CG HTAA IS K+ TWG G H
Sbjct: 424 KTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKH 463
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG GS E+ P SA ++ LACG T+ LT +G V+ G +GQ
Sbjct: 457 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 516
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + G L L L E V +IS G +H + +T E++ WG+ +NG+LG G
Sbjct: 517 LGNPLSDG-RLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 575
Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
+ PT VE L K + G F S+ +
Sbjct: 576 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 606
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
A G H A + G V+ +G+ + ++ N RP L+ L + + V CG YHTC
Sbjct: 270 ACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTC 329
Query: 302 VLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTA-AIS 357
+++ G+L+TWG ++ G LG G+ +V H P+RV GP V V+CG H+A A S
Sbjct: 330 AVSTSGDLFTWGDGTHNAGLLGHGT-EVSHWIPKRVSGPLEGLQVLSVACGTWHSALATS 388
Query: 358 EGKILTWGWGGSHGTFSEDGH 378
GK+ T+G GTF GH
Sbjct: 389 NGKLFTFG----DGTFGVLGH 405
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 52 GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N G+ + + + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A + P
Sbjct: 112 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 169
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
IP +V CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 170 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 220
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
+ TP I L+G++V+ A G+ H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 280
Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 281 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 19/294 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ TE V+ G+N G LG + + ++EP R+ L K++ +S G H
Sbjct: 30 AGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIEPRRLDSLCGKKIACLSYGSGPHVV 88
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE+Y WG N+ QLG G +P L + A G S+ +T G
Sbjct: 89 LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN-LVNKKVIEVACGSHHSMVLTSDG 147
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + K+ + A G + S + E
Sbjct: 148 EVYTWGYNNSGQVGSGS---------TANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVE 198
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 199 NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 365
+N G LG G+ P V + ++ +C HT+A G++ WG
Sbjct: 259 ANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T +V G SG LG G ++ST E PR + L G K+ + G H
Sbjct: 38 TENDEVFVLGMNCSGCLGTGD-------MQSTIE--PRRLDSLCGKKIACLSYGSGPHVV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
E G VY +G A ++ NH P +S ++ EV CG +H+ VLTS GE
Sbjct: 89 LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+YTWG N +G +G GS P RV V ++CG + A+ E G++ WG+
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K V++I+ + H S+A T G++YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 312
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 12/256 (4%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P AFE + ++CG H+L + G V+A G GQLGI E S P +I
Sbjct: 87 KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146
Query: 121 LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L +++Q+S GY+HS A++ DG+++ WGKNS+GQLGLGK+ P +V L GI
Sbjct: 147 LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTS-PQRVRSLEGIPL 205
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G WG+ +G+L ++ G Y P + L+ +
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQL------ALSGTKAPVQRYKPLSVGALKTLG 259
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGY 298
V + G H+A + +NG VY FG + ++ R P + ++ ++ CG Y
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQL--GHSAEQRGPQCVERIDGLVSQIDCGSY 317
Query: 299 HTCV-LTSGGELYTWG 313
HT + + G++ ++G
Sbjct: 318 HTLAYVYTTGQVVSFG 333
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 29/277 (10%)
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ E S +P +I + V +S G HS A+ G ++ WG S GQLG+G+ +
Sbjct: 78 LREESAPSSKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKER 137
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P K++ L+GI Q + G+ S+A++ G+V SWG G+LG G+E
Sbjct: 138 SF-TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVP------- 189
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARR 280
S+ +P+ ++ LEG+ + AAG HS + +G + +G + ++ + +
Sbjct: 190 -SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYK 248
Query: 281 PSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P + L + CG HT VLT G +YT+G+N +G LG HS E+ +GP
Sbjct: 249 PLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLG-------HSAEQ-RGPQ 300
Query: 339 SESPVD----QVSCGWKHTAA--ISEGKILTWGWGGS 369
+D Q+ CG HT A + G+++++G G S
Sbjct: 301 CVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFGHGPS 337
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAHTLFLTE 88
R FA WG G G+LG+G + R +F +KALA CG H+L L+E
Sbjct: 117 RVFA--WGAGSEGQLGIGEFKER-------SFTPQKIKALAGIKIIQVSCGYYHSLALSE 167
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
G V++ G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + W
Sbjct: 168 DGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 227
Query: 148 GKNSNGQLGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQL L G KA P V L + + G E + +T G V ++GA S
Sbjct: 228 GSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSS 287
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH E + P+ ++ ++G+ +I + A + G+V FG
Sbjct: 288 GQLGHSAE-----------QRGPQCVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 333
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GEL+ WG+NS+GQLGLG+ P P VE L+G+ Q + G S+A++ G V SW
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSS-PTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW 971
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG G + S+ +P L++ L+ KV A G H+A + ++G V+
Sbjct: 972 GKNDFGQLGLGH---------TESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFT 1022
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG-GELYTWGSNENG 318
FG ++ RP L+++L ++ CG +HT S G+++ +GS +NG
Sbjct: 1023 FGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNG 1082
Query: 319 CLG 321
LG
Sbjct: 1083 QLG 1085
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G ++A G N GQLG+ S P + L +VQIS G HS A+++ G +Y WG
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
KN GQLGLG +K P+ + L A G + +T G V ++GAG G+
Sbjct: 973 KNDFGQLGLGHTESK--DSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
LGH + E P L+ EL G +V A G H+ A + E G+V+ FG
Sbjct: 1031 LGHSS---------TRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFG 1077
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +++ + + G E S+AV G+V +WGAG G+LG G+ RS +
Sbjct: 88 PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKE-----RS---F 139
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK 286
TP+ IK L G+K+ + G+ HS + E+G+V+ +G + ++ L +E P +
Sbjct: 140 TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS 199
Query: 287 L---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP- 342
L P ++ V GG H+ L+ G + WGSN G L + +P + P S
Sbjct: 200 LEGIPLAQ-VAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTK---APVQRYKPLSVGAL 255
Query: 343 ----VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
V +SCG +HTA +++ G + T+G S G G Q
Sbjct: 256 KTLGVVYISCGSEHTAVLTQNGAVYTFG-ANSSGQLGHSAEQRGPQ 300
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LGLG ES+ P + A + + LACGG+HT LT+ G V+ G +GQ
Sbjct: 971 WGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG S L P ++ L V QI+ G H+ A + G+++ +G NGQLG
Sbjct: 1031 LGHSSTRD-ELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S P + L ++ G AH++ L+ TG VY+ G NDFG
Sbjct: 918 WGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFG 977
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ L + ++V ++ G H++ +T DG ++ +G GQLG
Sbjct: 978 QLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTR 1037
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG----HGQESS 216
++ P V L G Q A G ++A V+ GKV ++G+G +G+LG H Q +S
Sbjct: 1038 DEL--RPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTHNQPNS 1095
Query: 217 ILGFLR 222
+ R
Sbjct: 1096 YVNLRR 1101
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
++ G H+ L+ G +Y+WG N+ G LG+G + SP ++ S+ VD ++CG
Sbjct: 951 QISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQK-VDFLACGGS 1009
Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
HTA ++ +G + T+G G + + GHSS R +L P
Sbjct: 1010 HTALLTQDGLVFTFG----AGKYGQLGHSS----TRDELRP 1042
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
GEL+ WG N +G LG+G I ++ + P+ Q+S G H+ A+S G + +WG
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 141/277 (50%), Gaps = 23/277 (8%)
Query: 92 VYATGLNDFGQLGISENIGY-SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
V++ G N +G+LG + S E RI L+ KE++QI G H+ +T DG+++ G
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 432
Query: 150 NSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
N NGQ G G + + + IP K++ SG A G E ++ V+ G+V + G G
Sbjct: 433 NDNGQCGQGGTARVSHLSEIP-KMD--SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 489
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDEN-GRVYIFGD 264
+LGHG +TSE P++I+ LE V++ + + H+ AC D N +Y FG
Sbjct: 490 QLGHGN---------TTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 540
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + + P + L + V CG YHT V+T G+ + +G N+ G LGI
Sbjct: 541 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGI 600
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
+++ +P +V+G ++ CG+ HT A+ G
Sbjct: 601 DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSG 637
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI 105
G+LG G+ S P + + E ++ ++C HT+ E G + Y G ND+GQLG
Sbjct: 489 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGH 548
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+++I + + +++V ++ G +H+ +TV G+ + +GKN GQLG+ ++
Sbjct: 549 NDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLA 608
Query: 166 PIPTK-----VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSIL 218
P+ + ECL + G+ ++A+ G + ++G G+LG G+ SS
Sbjct: 609 PVQVRGGLERQECL------EIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 662
Query: 219 GFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++ RLI ELEG + A G H+ + +NG +Y+FG ++ +
Sbjct: 663 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTE 722
Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
P I V G YHT VLT G E
Sbjct: 723 RVYPFPIDDFVGKRIALVAAGFYHTVVLTGGKE 755
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G DYG+LG R P A + ++ACG HT+ +T +G +A G ND+GQ
Sbjct: 538 FGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQ 597
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LGI + + L P+++ G ++E ++I GY+H+ A+ L+ +G+N GQLGLG+
Sbjct: 598 LGI-DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRS 656
Query: 161 AA----------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
A + ++ L G + A G ++AV+ G + +G G+LG
Sbjct: 657 NASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 716
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G +T P I + G ++ + AAGF H+ +
Sbjct: 717 TGD---------TTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 15/171 (8%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A +G DYG+LG+ ++E++ PV V E+ + CG HT+ L ++A G N
Sbjct: 587 AFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRN 646
Query: 99 DFGQLGI-----SENIGYSLEPLRISGLK-------KEVVQISTGYHHSSAITVDGELYM 146
D+GQLG+ S L+ R S + K++V+I+ G +H+ A++ +G +Y+
Sbjct: 647 DYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYV 706
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+G+N++GQLG G +V P P ++ G A GF +V +TGG +
Sbjct: 707 FGRNNHGQLGTGDTTERVYPFP--IDDFVGKRIALVAAGFYHTVVLTGGKE 755
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 33/348 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG LG G SR A ++ + + G HT+ LT G V+ G ND GQ
Sbjct: 379 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 438
Query: 104 GI--SENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + + + E P SG + G H+ ++ DG + G N GQLG G
Sbjct: 439 GQGGTARVSHLSEIPKMDSGSSQ--AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 496
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG---KVLSWGAGGSGRLGHGQESSI 217
++ +P + L + + + +V G + ++G G+LGH
Sbjct: 497 TSE--SVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHND---- 550
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ ++ L ++ A G H+ + +G+ + FG ++ +
Sbjct: 551 -----SIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMEN 605
Query: 278 ARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV------- 327
P + L E E+ CG YHT L SG L+ +G N+ G LG+G +
Sbjct: 606 QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQ 665
Query: 328 ----LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
S R+ + +++CG HT A+S+ ++ +HG
Sbjct: 666 LQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHG 713
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 169/428 (39%), Gaps = 97/428 (22%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G G G LG G + P++ F ++++ACG H++ + ETG VY G GQ
Sbjct: 1 GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60
Query: 103 LGISE-NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMW------------- 147
LG E +L+P+R+ GL+ E VV GY+H A+TV G+LY W
Sbjct: 61 LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANK 120
Query: 148 ----------GKNSN----------------GQLG-----------LGKKAAKVIPIPTK 170
G NS+ G G G P P
Sbjct: 121 EYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEV 180
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V L + + A G+ S+AVT G+V SWG +LG G ++ P+
Sbjct: 181 VTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHR---------YNQSVPQ 231
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L+ L+GV + A G HS + G VY FG ++ + R P + L +
Sbjct: 232 LVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPA 291
Query: 291 EE-----------VVCGGYHTCVLTSGGELYTWGSNENGCLG---------------IGS 324
EE + CG +HT L G ++TWGS E G G +
Sbjct: 292 EEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSA 351
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 383
+ +P + G F + VSCG H A + +G + +WGW GS+G H
Sbjct: 352 AMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGW-GSYGVLGHGNH----- 405
Query: 384 LDRGQLTP 391
R QL P
Sbjct: 406 --RFQLVP 411
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 102/238 (42%), Gaps = 38/238 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + +LGLG ++ P + + + + CG H++ L+ G VY GL FGQ
Sbjct: 211 WGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQ 270
Query: 103 L--GISENIGYSLEPLRISGLK----------KEVVQISTGYHHSSAITVDGELYMWGKN 150
L G+S + + P R+ L + +VQI+ G HH+ A+ V G ++ WG
Sbjct: 271 LGHGVSSDERF---PRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSA 327
Query: 151 SNGQLG-------------LGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGG 196
GQ G K AA + P + C G + G ++A G
Sbjct: 328 EYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDG 387
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
V SWG G G LGHG L P+LI+ + G ++ AAG HS ++
Sbjct: 388 SVYSWGWGSYGVLGHGNHRFQL---------VPKLIRRIGGERIVQTAAGAKHSLAVN 436
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 123/276 (44%), Gaps = 46/276 (16%)
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P ++GL+ +VV+++ GY S A+T GE+Y WG N QLGLG + + +P V
Sbjct: 178 PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVP--QLVPH 235
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L G+ A G + SV ++ G V ++G G G+LGHG S+ E PR ++
Sbjct: 236 LQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGV---------SSDERFPRRVE 286
Query: 234 EL----EGV-----KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA------ 278
L EGV ++ A G H+ + +G V+ +G + Q G +A
Sbjct: 287 ALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQ---QGGTNAYEDWAT 343
Query: 279 -----RRPSLISKLPYS----------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++I P S V CG H G +Y+WG G LG G
Sbjct: 344 GQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHG 403
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
+ P+ ++ E V Q + G KH+ A++ G
Sbjct: 404 NHRFQLVPKLIRRIGGERIV-QTAAGAKHSLAVNAG 438
>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 400
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
WG G G+LG LE P + S + LACGGAH L LT G V G
Sbjct: 17 WGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGT 76
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG + + SL+P + L+ V+ +S G+ HS ++ G L+ G S GQLG G
Sbjct: 77 SGQLGHGDMVS-SLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHG 135
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+ KV Q A G S+ + G +V +G+G G+LG +++
Sbjct: 136 DCKSHCSPV--KVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLGVSMDNT-- 191
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
RS S P+ LEGV++ A HSA + NG +Y +G F +
Sbjct: 192 ---RSIS--VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG------FGSTSDV 240
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG----------IGSIDV- 327
P + +V G H VLT GGE++ G N +G LG + I+V
Sbjct: 241 HCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVF 300
Query: 328 LHSP--------ERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWG 367
LH P E+VQG V Q++ G +H+A ++E +++ TWGWG
Sbjct: 301 LHGPEESREENLEKVQG-LDGLNVVQIAAGAEHSALVTENRVIKTWGWG 348
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 40/315 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + S +P E + ++ G +H+ F+++TGC++ G FGQ
Sbjct: 72 WGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQ 131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + P+++S K V QI+ G HS + ++Y +G GQLG+
Sbjct: 132 LGHGDCKSHC-SPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLGVSMDN 190
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ I +P L G+ + S A++ G + +WG GF
Sbjct: 191 TRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGR---------------GFG 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF-GDRAVDKMLFQEGNHARR 280
++ + PR + + A G+ H + G V++ G+R Q+G+ +
Sbjct: 236 STSDVHCPRCLP--SSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKH 293
Query: 281 PSLISKLPYSEE--------------------VVCGGYHTCVLTSGGELYTWGSNENGCL 320
S+I + E + G H+ ++T + TWG E+G L
Sbjct: 294 LSVIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQL 353
Query: 321 GIGSIDVLHSPERVQ 335
G+G+ SP+ V+
Sbjct: 354 GLGNTYDQISPQAVR 368
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 16/231 (6%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSW 201
E++ WG ++GQLG + + +P + S A G +A+T GKV++W
Sbjct: 13 EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 72
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G SG+LGHG S L P+ +K LE + +AG+ HS + + G ++
Sbjct: 73 GRGTSGQLGHGDMVSSL---------QPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFT 123
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
GD + ++ + P +S + +++ CG H+ VL G ++Y +GS + G
Sbjct: 124 CGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQ 183
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVS--CGWKHTAAIS-EGKILTWGWG 367
LG+ S+D S Q V+ +S H+AA+S G + TWG G
Sbjct: 184 LGV-SMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG 233
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L V CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ ++ + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLNDIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
A+S + ++ +W G +S GQL G+ PS+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQ 169
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 20/329 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +S+ PV ++ A+ CGG H++ L G V+A G N G+
Sbjct: 179 WGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGE 238
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
L G +EN P+ + L +++ IS G +S A++ DG + WG NS+GQLG G
Sbjct: 239 LGGGTTENNSNVPVPVPVPNL-TDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNT 297
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+PTK+ L K + G S+AVT G V +WG G++G+G++S+
Sbjct: 298 DQNS--VPTKISSLP--LMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPV 353
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L P ++ L + A A F + ID GRV+ +G ++ ++
Sbjct: 354 LN------PVQVQGLTDIDAVCAGATFSLALGID--GRVWAWGLNDEGQLGDGTNTNSTT 405
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P ++ L V CG H+ + + G++ +WG N+ G LG GS +P V G
Sbjct: 406 PVEVTNLAKISAVACGSDHSLAIRN-GKVKSWGLNDEGQLGDGSTRSSSAPLDVTG---L 461
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
S + V+ G H+ AI S+G I WG G
Sbjct: 462 SDIVYVAAGESHSLAITSKGNIYVWGLNG 490
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 22/295 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
++ G +H+L L G ++A GLN+ GQLG N + ++I+ L + + G H
Sbjct: 160 ISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTT-ITAVDCGGDH 218
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S A+ G ++ WG N +G+LG G + +P+P V L+ I A G E S+A++
Sbjct: 219 SMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISA--GGEYSIALS 276
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G VL+WGA G+LG+G + P I L +K +AG HS +
Sbjct: 277 SDGSVLTWGANSDGQLGNG---------NTDQNSVPTKISSLP--LMKGISAGEAHSLAV 325
Query: 254 DENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
E+G VY +G ++ E N P + L + V G + L G ++
Sbjct: 326 TEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCAGATFSLALGIDGRVW 385
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
WG N+ G LG G+ +P V + + + V+CG H+ AI GK+ +WG
Sbjct: 386 AWGLNDEGQLGDGTNTNSTTPVEVT---NLAKISAVACGSDHSLAIRNGKVKSWG 437
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 28/276 (10%)
Query: 104 GISENIGYSLEPLRISGLKKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G G+S P R +G + + QIS G+ HS A+ +G+L+ WG N +GQL
Sbjct: 129 GTQPQPGFSPRP-RPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQL 187
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P+ ++ L+ I G + S+A+ G+V +WG G G LG G
Sbjct: 188 GDGTNDSQTTPVAVQINALTTITA--VDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTE 245
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ I + I+A G +S + +G V +G + ++
Sbjct: 246 NNSNVPVPVPVPNLTDI-------IAISAGGE-YSIALSSDGSVLTWGANSDGQLGNGNT 297
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG---SIDVLHSPE 332
+ P+ IS LP + + G H+ +T G +Y WG N+ G +G G + + + +P
Sbjct: 298 DQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPV 357
Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
+VQG + +D V G + A+ +G++ W WG
Sbjct: 358 QVQG---LTDIDAVCAGATFSLALGIDGRV--WAWG 388
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ + PV + K + A+ACG H+L + G V + GLND GQ
Sbjct: 387 WGLNDEGQLGDGTNTNSTTPVEVTNLAK--ISAVACGSDHSLAI-RNGKVKSWGLNDEGQ 443
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S PL ++GL ++V ++ G HS AIT G +Y+WG N +GQLG G +
Sbjct: 444 LGDGSTRSSSA-PLDVTGLS-DIVYVAAGESHSLAITSKGNIYVWGLNGDGQLGDGTNRS 501
Query: 163 KVIP 166
P
Sbjct: 502 SRTP 505
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 169/368 (45%), Gaps = 57/368 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG LG E + V + ++ A+A G H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLLVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372
Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG EN +SL P ++ L VV I+TG H+ AI DG ++ WG N+ GQLG G
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNG-- 428
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG------------------ 202
K IPT V+ L+ +A G + S+AV G V WG
Sbjct: 429 TYKSSYIPTCVKGLNNAVLVEA--GSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPL 486
Query: 203 -------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELEGVK 239
AGG + G G + F S+ +LI+ L+ +K
Sbjct: 487 PIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LDNIK 545
Query: 240 -VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
V+ AAG+ HS + +G V+ +GD +D + N + +P I L +V G Y
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKK-KYLNFSEKPVKIKGLSGVVKVAAGKY 604
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
H+ L G +++WG N G LG G+ + P RV+G + V ++ G H+ A+
Sbjct: 605 HSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL---NNVVAIAAGDYHSMALKK 661
Query: 358 EGKILTWG 365
+G + WG
Sbjct: 662 DGTVWVWG 669
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 155/326 (47%), Gaps = 24/326 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +YG+ PV E ++ A+A G +L + G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LGI + S P+++ GLK +VV +S G +HS A+ DG ++ WG N +G+LG
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P +V+ LS + A GF S+A+ G V WG G + G S
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P I+ L KV AAG+ HS + ++G V+++G + + G H+
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLL 335
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSE 340
+ L V G H+ LT G ++ WG+N G LG + L+ P +V+
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL--- 392
Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWG 365
V ++ G HT AI +G + +WG
Sbjct: 393 DNVVAIATGGSHTLAIKRDGTVWSWG 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 162/332 (48%), Gaps = 33/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ + PV + + A++ G H+L L + G V+ G ++GQ
Sbjct: 66 WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
++ P+++ L K +V I+ G+ S A+ DG ++ WG N++G+LG+G +
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P KV+ L + A G S+A+ G V SWG G LG+ R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227
Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T +YT P +K L V + I+A GF HS ++++G V+I+G ++K + +++
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGP 337
P I L + G H+ L G ++ WG N G LG +G HS VQ
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGE----HSFLLVQVK 339
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
++ V V+ G H+ A+++ + W WG +
Sbjct: 340 GLKNVV-AVAAGRLHSVALTKNGTI-WAWGNN 369
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 142/311 (45%), Gaps = 47/311 (15%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E + + G HTL + + G V+A G N FGQLG + S P+R+ GL K+VV +
Sbjct: 40 ENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLG-NGTYKDSCIPVRVKGL-KDVVAV 97
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS A+ DG +++WG + GQ + P KV+ L I A G++
Sbjct: 98 SAGTFHSLALKKDGSVWIWGHTNYGQ--RKSDVYRDFTTPVKVKELKNIVA--IAAGWDF 153
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+AV G V +WG G LG +G L+ ++ P +K L+ V +AG
Sbjct: 154 SLAVGSDGSVWAWGINNHGELG-------IGSLKPSA--VPVKVKGLKDVVA--VSAGLY 202
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS---------LISKLPYSEEVVCGGYH 299
HS + +G V+ +G ++G RP+ + L + GG+H
Sbjct: 203 HSLALKRDGTVWSWGYN-------EDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFH 255
Query: 300 TCVLTSGGELYTWGSNENGCLGI----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
+ L G ++ WG GI G ID + P R++ + V ++ G++H+ A
Sbjct: 256 SIALNKDGAVWIWGG------GIIEKNGKIDNSYIPVRIRWL---NKVVAIAAGYRHSIA 306
Query: 356 I-SEGKILTWG 365
+ +G + WG
Sbjct: 307 LKDDGTVWVWG 317
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 154/383 (40%), Gaps = 89/383 (23%)
Query: 43 WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +G+LG + S P + ++ A+A GG+HTL + G V++ G N+ G
Sbjct: 366 WGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIATGGSHTLAIKRDGTVWSWGANNKG 423
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--------KNSNG 153
QLG + S P + GL V+ + G HS A+ DG +++WG KN+
Sbjct: 424 QLG-NGTYKSSYIPTCVKGLNNAVL-VEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKD 481
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L P+P K+ L+ I + A G + + + G + WG G
Sbjct: 482 ILS---------PLPIKIGKLNDI--TEIAGGLDYILVLRKDGNI--WGCG--------N 520
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDK--- 269
+ F S+ +LI+ L+ +K V+ AAG+ HS + +G V+ +GD +D
Sbjct: 521 DFYFRKFTDSSVSSVTKLIR-LDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKKK 579
Query: 270 -MLFQE-----------------------------------------GNHARR----PSL 283
+ F E GN R P
Sbjct: 580 YLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVR 639
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
+ L + G YH+ L G ++ WGSN G LG +I+ P +V+ V
Sbjct: 640 VKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVE---KLDNV 696
Query: 344 DQVSCGWKHTAAI-SEGKILTWG 365
++ G H+ A+ +G + WG
Sbjct: 697 VAIAAGDTHSVALKKDGTVWVWG 719
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 25/206 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+++++A G H+L + G V++ G D + + +S +P++I GL VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKKKYLNFSEKPVKIKGLSG-VVKVAAG 602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+HS A+ DG ++ WG N+ GQLG G + +P+ +V+ L+ + A G S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
+ G V WG+ G+LG R E++ P +++L+ V V I AAG H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705
Query: 250 SACIDENGRVYIFG---DRAVDKMLF 272
S + ++G V+++G DR + K +
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEIL 731
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 21/251 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+ G +V+ G H+ AI DG ++ WG N GQLG G IP+ +V+ L +
Sbjct: 37 LQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKDV 94
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
A G S+A+ G V W G +GQ S R + TP +KEL+
Sbjct: 95 VAVSA--GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELKN 143
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
+ V I AAG+ S + +G V+ +G ++ + P + L V G
Sbjct: 144 I-VAI-AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGL 201
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHTAA 355
YH+ L G +++WG NE+G LG + + P RV+G S V +S G H+ A
Sbjct: 202 YHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGL---SDVIAISAGGFHSIA 258
Query: 356 IS-EGKILTWG 365
++ +G + WG
Sbjct: 259 LNKDGAVWIWG 269
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ E+ + PV +++ A+A G H++ L + G V+ G N GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG NI +S PL++ L VV I+ G HS A+ DG +++WG + L ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733
Query: 163 KVIPIPTK 170
IP+ K
Sbjct: 734 SSIPVQIK 741
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 57 GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 116
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N G+ + + + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A + P
Sbjct: 117 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 174
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
IP +V CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 175 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 225
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
+ TP I L+G++V+ A G+ H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 226 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 285
Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 286 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 316
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ TE V+ G+N G LG + + ++E
Sbjct: 11 KWPIFSLCSQEELKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 69
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G +P
Sbjct: 70 PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 129
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 130 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 179
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
K+ + A G + S + ENG VY++G ++ + P I+ L
Sbjct: 180 TSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 239
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 240 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACH 298
Query: 350 WKHTAA--ISEGKILTWG 365
HT+A G++ WG
Sbjct: 299 SAHTSAAKTQSGQVYMWG 316
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T +V G SG LG G ++ST E PR + L G K+ + G H
Sbjct: 43 TENDEVFVLGMNCSGCLGTGD-------MQSTIE--PRRLDSLCGKKIACLSYGSGPHVV 93
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
E G VY +G A ++ NH P +S ++ EV CG +H+ VLTS GE
Sbjct: 94 LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE 153
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+YTWG N +G +G GS P RV V ++CG + A+ E G++ WG+
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYN 213
Query: 368 GS 369
G+
Sbjct: 214 GN 215
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 209 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 268
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K V++I+ + H S+A T G++YMWG+ GQ
Sbjct: 269 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 321
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 322 --SVILPHLTHFACTDDVF 338
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 154/355 (43%), Gaps = 56/355 (15%)
Query: 37 RRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
RR AAL WG GRLG G P + + +++ +ACG H+ +T
Sbjct: 314 RRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVT 373
Query: 88 ETGCVYATG--LNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGE 143
+G +Y G ++ G LG N + P +++G + V +S G H++ +T G+
Sbjct: 374 LSGDLYTWGGSSHNCGLLGY-RNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQ 432
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------- 193
L+ +G + G LG G + + + P +VE L G+ T +AA G + AV
Sbjct: 433 LFTFGDGTFGVLGHGDR--RSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 490
Query: 194 --GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
GK+ +WG G GRLGHG + S L P + L A G +
Sbjct: 491 NCSSGKLFTWGDGDKGRLGHGDKESRL---------VPTCVAALVEPNFCQVACGHSMTV 541
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTC 301
+ G VY G + Q GN P KLP + EE+ CG YH
Sbjct: 542 ALTTTGHVYTMGS----PVYGQLGN----PQADGKLPVRVEGKLSKNFVEELDCGAYHVA 593
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
VLTS E+YTWG NG LG G D SP V+ + V V CG TAAI
Sbjct: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEA-LKDKQVKSVVCGTSFTAAI 647
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 161/320 (50%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACG H +T+ G V++ G G+L G+ ++ L P + GLK V+ ++
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDV---LHPKLVDGLKNTNVELVA 363
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +HS A+T+ G+LY WG +S+ G LG +A+ +P K+ L GI + G
Sbjct: 364 CGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNW--VPKKLNGPLEGIHVAAVSCGP 421
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ TPR ++ L+G++ AA G
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRRSV---------STPREVESLKGLRTVRAACG 472
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 473 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKESRLVPTCVAALVEPNF 530
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG T LT+ G +YT GS G LG D P RV+G S++ V+++ CG
Sbjct: 531 CQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADG-KLPVRVEGKLSKNFVEELDCGA 589
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 590 YHVAVLTSRTEVYTWGKGAN 609
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-------IPTKVECLSGIFTKQAA 183
G+ S A+ G++Y+WG+ + G + G +P +E + + A
Sbjct: 255 GHDDSDAL---GDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESAVLLDVQTIA 311
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + VT G+V SWG GRLGHG +S +L P+L+ L+ V++
Sbjct: 312 CGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLH---------PKLVDGLKNTNVELV 362
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGY 298
A G HS + +G +Y +G + + L N A P ++ + + V CG +
Sbjct: 363 ACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPW 422
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT V+TS G+L+T+G G LG G + +P V+ V + +CG HTAA+ E
Sbjct: 423 HTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTV-RAACGVWHTAAVVE 481
Query: 359 -------------GKILTWGWG 367
GK+ TWG G
Sbjct: 482 VMVGSSSSSNCSSGKLFTWGDG 503
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + A ++ +ACG HT +T G +Y G ++
Sbjct: 303 WGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RI+G + +V ++ G H++ IT G+L+ +G + G LG G
Sbjct: 363 GLLGHGTDVSHWI-PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 421
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
+ + + P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 422 DR--ENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKN 479
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + R P LI++ A G + + +GRV+ G V
Sbjct: 480 RLGHGDKDA-----RLEPTCVPSLIED----NFHRIACGHSLTVGLTTSGRVFTMGS-TV 529
Query: 268 DKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + + P L+ EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 530 YGQLGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGD 589
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
++ SP V+ + V ++CG +++AI
Sbjct: 590 VEDRKSPTLVEA-LKDRHVKYIACGSNYSSAI 620
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 29/259 (11%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V+QI+ G H++ +T GEL+ WG+ S G+LG G K + P VE ++ A
Sbjct: 280 DVLQIACGVKHAALVTRQGELFTWGEESGGRLGHG--VGKNVVQPRLVEAMASTTVDFVA 337
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKV 240
G + AVT G++ +WG G +G LGHG + S + P+ I LEG++V
Sbjct: 338 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD---------VSHWIPKRIAGPLEGLQV 388
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
+ G H+A I G+++ FGD + + + P + L + V CG +
Sbjct: 389 ALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVW 448
Query: 299 HTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
HT + S G+L+TWG + LG G D P V E +++
Sbjct: 449 HTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPS-LIEDNFHRIA 507
Query: 348 CGWKHTAAI-SEGKILTWG 365
CG T + + G++ T G
Sbjct: 508 CGHSLTVGLTTSGRVFTMG 526
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 37/255 (14%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ + ++G K A+ P +P +E + Q A G + + VT
Sbjct: 236 GDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVT 295
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ +WG GRLGHG +++ PRL++ + V A G H+ +
Sbjct: 296 RQGELFTWGEESGGRLGHGVGKNVV---------QPRLVEAMASTTVDFVACGEFHTCAV 346
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G P I+ P V CG +HT ++TS G
Sbjct: 347 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-PLEGLQVALVTCGPWHTALITSTG 405
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI----------- 356
+L+T+G G LG G + + P V+ S V+CG HTAAI
Sbjct: 406 QLFTFGDGTFGVLGHGDRENVSYPREVES-LSGLRTIAVACGVWHTAAIIEVIVTQSSAS 464
Query: 357 -SEGKILTWGWGGSH 370
S GK+ TWG G +
Sbjct: 465 VSSGKLFTWGDGDKN 479
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 159/354 (44%), Gaps = 32/354 (9%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLT 87
+I S R FA G G GRLGLG + P ++ +K +A GG H L LT
Sbjct: 3120 FIVSQEGRVFAC--GEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3177
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYM 146
G V++ G + G+LG +P ++ L+ K++ ++ G HS+AI+ GELY
Sbjct: 3178 LDGKVFSWGEGEDGKLGHGNRTTLD-KPRQVEALRAKKIRDVACGSSHSAAISSQGELYT 3236
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAG 204
WG G+LG G A ++ P V L+G Q A G Q++A+T G V SWG G
Sbjct: 3237 WGLGEYGRLGHGDNATQLKP--KLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3294
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G S TP I+ L G+ V G S + G V+ +G
Sbjct: 3295 DFGKLGRGG---------SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3345
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ H R+P I L V G H +T G++Y WG N++G G
Sbjct: 3346 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGS 3405
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
G+ V P V G + V++V+CG H+ A WG + T E+
Sbjct: 3406 GNTFVNKKPALVIG-LDDVFVNRVACGSSHSIA----------WGLPNATMEEE 3448
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4229 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4286
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4287 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4345
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L G+ A G S A+T G+VL+WG G GRLGHG
Sbjct: 4346 GNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGD---- 4399
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4400 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4449
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 4450 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4507
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4508 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWG 4546
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 131/291 (45%), Gaps = 16/291 (5%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A+ GG H L LT G VYA G + G+LG + Y L V I+ G H
Sbjct: 4315 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAH 4374
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT G++ WGK G+LG G ++ P VE L G A G Q++ +
Sbjct: 4375 SAAITASGQVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLCI 4432
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4433 TDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFSVA 4483
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G VY +G ++ +H RRP ++ L + + G H + GE+Y
Sbjct: 4484 LTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY 4543
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
TWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4544 TWGDNDEGQLGDGTVTAIQRP-RLVSALQGKHIVKVTCGSAHTLALSTSQL 4593
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4335 WGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR 4394
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4395 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4452
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4453 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4509
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4510 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4562
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L+S L + +V CG HT L++
Sbjct: 4563 RPRLVSALQGKHIVKVTCGSAHTLALST 4590
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 147/302 (48%), Gaps = 23/302 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G V+A G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3114 GGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3172
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P +VE L + A G S A++
Sbjct: 3173 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRQVEALRAKKIRDVACGSSHSAAISS 3230
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3231 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALAGRRVVQVACGSRDAQTLA 3281
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3282 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3341
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3342 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDSGQVYAWG-DND 3399
Query: 370 HG 371
HG
Sbjct: 3400 HG 3401
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV+ F+ +K + C L L++ G ++A L+ EP +
Sbjct: 581 PVLSCRFQ---VKQVVCSENQVLLLSQEGKLHAWRLSK-----------PEAEPQPLEEA 626
Query: 122 KKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
E IS H H AI + Y WG + +LG G A+ +P TK+ L
Sbjct: 627 GHETF-ISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVP--TKIAALEQH 683
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-E 236
+ G S +T GG +L+WG G RLGHG S P L+ L E
Sbjct: 684 CVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGN---------SDDRCLPTLVAALAE 734
Query: 237 GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
V +A +G HS + G V+ +GD K+ N + +P L+ LP + +
Sbjct: 735 HTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA 794
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVSCGWKH 352
G ++ L+S G++YTWG + CLG ++ S R+ + ++ G H
Sbjct: 795 GSQYSVALSSEGQVYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAH 852
Query: 353 TAAI-SEGKILTWG 365
A+ S G++ WG
Sbjct: 853 CLALSSSGEVFGWG 866
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 91/313 (29%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVSQ---------- 3124
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
+G ++ G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 3125 EGRVFACGEGTNGRLGLG--VTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3182
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PR ++ L K++
Sbjct: 3183 FSWGEGEDGKLGHGNRTTL---------DKPRQVEALRAKKIR----------------- 3216
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+V CG H+ ++S GELYTWG E G
Sbjct: 3217 ---------------------------------DVACGSSHSAAISSQGELYTWGLGEYG 3243
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG--GSHGTF 373
LG G P+ V + V QV+CG + T A++E G + +WG G G G
Sbjct: 3244 RLGHGDNATQLKPKLVAA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3302
Query: 374 SEDGHSSGGQLDR 386
+G + +++R
Sbjct: 3303 GSEGSDTPHEIER 3315
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG ++ +T G + G + +
Sbjct: 655 WGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYAR 714
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L L + + VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 715 LGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 774
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
+ PI VE L + ++ G + SVA++ G+V +WG LGH E S+ G
Sbjct: 775 NGSLQPI--LVESLPRV--QRIFAGSQYSVALSSEGQVYTWGKATC--LGHQLVERSVQG 828
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A G H + +G V+ +G
Sbjct: 829 C------SVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWG 866
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 133/305 (43%), Gaps = 34/305 (11%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H + + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSA 696
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
IT G L WG+ + +LG G + +P T V L+ ALG S+A+T
Sbjct: 697 VITCGGNLLTWGRGTYARLGHGNSDDRCLP--TLVAALAEHTVVDVALGSGDAHSLALTS 754
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L +V+ AG +S +
Sbjct: 755 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLP--RVQRIFAGSQYSVALS 803
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G+VY +G +++ + P L+S L + ++ G H L+S GE++
Sbjct: 804 SEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVF 863
Query: 311 TWGSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
WG N+ + + S +L SP V P P ++C + G+ L W
Sbjct: 864 GWGRNDCQQVCPSSVSSEPLLRSPILVALP--TLPASGIAC--------TAGQSLIWTQS 913
Query: 368 GSHGT 372
G
Sbjct: 914 SHQGV 918
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 119/302 (39%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4226 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4283
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4284 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4343
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G+V +G +
Sbjct: 4344 GHGNR---------VSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR 4394
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4395 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4454
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 4455 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 4509
Query: 385 DR 386
R
Sbjct: 4510 RR 4511
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 56/168 (33%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + +A +H++ AL G AH+L LT G V+A G D+
Sbjct: 707 WGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDY 766
Query: 101 GQLGISENIGYSLEPLRISGLK-------------------------------------- 122
G+LG + N SL+P+ + L
Sbjct: 767 GKLG-NGNCNGSLQPILVESLPRVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERS 825
Query: 123 ---------------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
K +V ++ G H A++ GE++ WG+N Q+
Sbjct: 826 VQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV 873
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG G+LG + S I TP + L ++ A G +
Sbjct: 4222 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4272
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+++ G + ++ + P+L+ L + V GG H LT+ GE+
Sbjct: 4273 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4332
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
Y WG E+G LG G+ P+ V+ S D ++CG H+AAI+ G++LTWG G
Sbjct: 4333 YAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVAD-IACGSAHSAAITASGQVLTWGKG 4390
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 160/335 (47%), Gaps = 19/335 (5%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L GS E +P + AF + + + G T + G V A G +G
Sbjct: 381 VWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQTIEAGQYCTFVVYSDGTVRACGKGSYG 438
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG+ + N +L+ L + + +IS+ H+ A+T DGE++ WG G+LG
Sbjct: 439 RLGLGDSNNQTTLKKLNFDH-RYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGKLGH 497
Query: 158 GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +++ L G K + G+ S AVT G++ +WG G GRLGHG +
Sbjct: 498 GNSSTQ--KYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNR 555
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG + Y P++I+ L G+ ++ G S + G+++ +G A E
Sbjct: 556 KLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGCGACLGCGSPEST 615
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPER 333
A RP L+ +L + +V CG H LT E+Y WG+N G G G S + P++
Sbjct: 616 -ALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKK 674
Query: 334 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
V G V Q+S G H TA ++ +++ W
Sbjct: 675 VVG-LDGVTVHQISAGTSHSLAWTALPTDRQVVAW 708
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE---------- 172
++++Q+ S D ++ K S+G L A ++ +P++V
Sbjct: 295 QQILQVMENSGGSGNDKRDHQITDTNKTSDGMFPL-YLAGMLLSLPSQVAWLASDYARSC 353
Query: 173 -CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
C S + ++ G E VT +V WG+ S +L G + IL P+L
Sbjct: 354 VCPSPVPIDDSSTG-ENGNMVTENSEVYVWGSNSSHQLAEGSQEKIL---------QPKL 403
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+ AG + + +G V G + ++ + N+ + + KL +
Sbjct: 404 SPAF--ANAQTIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQ---TTLKKLNFDH 458
Query: 292 EVVCGGY--------HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
V HT LT+ GE+++WG + G LG G+ P+++QG V
Sbjct: 459 RYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVV 518
Query: 344 DQVSCGWKHTAAISE-GKILTWGWG 367
+S G++H+AA++E G++ TWG G
Sbjct: 519 KSISAGYRHSAAVTEDGELFTWGEG 543
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 86 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 145
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 146 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 203
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 204 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 254
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LH C+++
Sbjct: 255 TP----------VRVAA---LHGMCVNQ-------------------------------- 269
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG GS + L SP ++ E ++ +
Sbjct: 270 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 323
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 324 CHSTHTSAAKTQGGHVYMWG 343
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 131 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 190
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 191 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 249
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 250 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 307
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 308 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 343
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 237 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 296
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 297 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 348
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 349 -SVILPHLTHFCCTDDVF 365
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 65 EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 115
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 116 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 175
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GEL+ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 176 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 235
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 236 GWGYNGN------------GQLGLGNNGNQLTP 256
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 28/329 (8%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ V S F + + +++CG H+ + ++G ++ G ND+GQLG+ S +P
Sbjct: 84 SRFADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHIS-KP 142
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
+ LK E V ++ G H+ TV +++ G + GQLG G A + P+
Sbjct: 143 SCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTSTPVLIYD 202
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+G Q G S+A+T G V +WG+ G+LG S ++ + T + P
Sbjct: 203 SGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVN--KPTKVHIPEP 260
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKL 287
+K + G+ HS + ENG VY+ G+ K+ F ++ L + +
Sbjct: 261 VKRI--------NTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNPV 312
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQ 345
Y V CGG+HT LT LY GSN +G LG+G+ + LH+P+ + QG + +
Sbjct: 313 IY---VACGGHHTMFLTENNNLYCTGSNSSGQLGLGTNVTELHTPKLLSQGALKNERISR 369
Query: 346 VSCGWKHTAAISE-GKILTWGWGGSHGTF 373
+SCG HTA ++E GK+ T G G HG
Sbjct: 370 ISCGESHTAILTESGKLYTCG-DGRHGKL 397
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 158/332 (47%), Gaps = 37/332 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +P + + +ACG AHTL T ++A G + G
Sbjct: 122 VFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEG 181
Query: 102 QLG--ISENIGYSLE-PLRI-----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
QLG IS IG S P+ I +G K +VQI G HHS A+T DG ++ WG N G
Sbjct: 182 QLGRGISA-IGDSTSTPVLIYDSGPTGSK--IVQIVAGSHHSLALTSDGNVFAWGSNLEG 238
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGL + ++ PTKV + K+ G+ S+ +T G V G SG+LG
Sbjct: 239 QLGLPDISG-LVNKPTKVHIPEPV--KRINTGYYHSIFLTENGLVYVCGESESGKLGID- 294
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
+ F +++ P+ + +L + +A G H+ + EN +Y G + ++ L
Sbjct: 295 ----INF---STQIMPKQM-QLPNPVIYVACGGH-HTMFLTENNNLYCTGSNSSGQLGLG 345
Query: 273 QEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGI----GS 324
P L+S+ E + CG HT +LT G+LYT G +G LG+ +
Sbjct: 346 TNVTELHTPKLLSQGALKNERISRISCGESHTAILTESGKLYTCGDGRHGKLGLEENENN 405
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ L +R + F + +SCG HT I
Sbjct: 406 VHELTFVQRYKQLF----ISNISCGGCHTILI 433
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G RP + +++ +ACG HT ++ +G ++ G ++
Sbjct: 291 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 350
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R+SG + +V+ ++ G HS+ T +G+L+ +G + G LG G
Sbjct: 351 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 409
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
+ + +P P +V+ LSG+ T + A G + A+ K+ +WG G R
Sbjct: 410 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 467
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G A
Sbjct: 468 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 518
Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN R P L+ KL + EE+ CG YH VLTS E++TWG NG LG
Sbjct: 519 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 574
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G + SP V+ + V +SCG TA+I
Sbjct: 575 GDTEDRRSPTFVEA-LKDRNVKSISCGSNFTASI 607
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 28/310 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ACG H +T G V+ G G+LG + +S L V ++ G +H+
Sbjct: 272 IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHT 331
Query: 136 SAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
A++ G+L+ WG ++ G LG G + + IP +V L G+ A G S
Sbjct: 332 CAVSTSGDLFTWGDGTHNAGLLGHGTEVSHW--IPKRVSGPLEGLQVLSVACGTWHSALA 389
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T GK+ ++G G G LGHG S+ PR ++ L G+K A G H+A
Sbjct: 390 TSNGKLFTFGDGTFGVLGHGDRESV---------PYPREVQILSGLKTIKVACGVWHTAA 440
Query: 253 IDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHT 300
I E + +++ +GD ++ P+ +S L Y+ ++ CG T
Sbjct: 441 IIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMT 500
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
LT+ G ++T G G LG + P VQ V+++SCG H A + S
Sbjct: 501 VALTTSGHVFTMGGTAYGQLG-NPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRS 559
Query: 360 KILTWGWGGS 369
++ TWG G +
Sbjct: 560 EVFTWGRGAN 569
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 115/267 (43%), Gaps = 46/267 (17%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V QI+ G H + +T GE++ WG+ S G+LG G P VE L+ A
Sbjct: 268 DVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHG--IDNDFSRPHLVEFLAVNNVDFVA 325
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKV 240
G + AV+ G + +WG G +G LGHG E S + P+ + LEG++V
Sbjct: 326 CGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTE---------VSHWIPKRVSGPLEGLQV 376
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE-------- 292
A G HSA NG+++ FGD F H R S +PY E
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGT-----FGVLGHGDRES----VPYPREVQILSGLK 427
Query: 293 ---VVCGGYHTCVL----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
V CG +HT + S +L+TWG + LG GS + P V
Sbjct: 428 TIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSA-LI 486
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ Q++CG T A+ + G + T G
Sbjct: 487 DYNFHQLACGHTMTVALTTSGHVFTMG 513
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 39/254 (15%)
Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPIPTKVECLSG--------IFTKQAALGFEQSVAV 192
G++Y+WG+ +G L G V P P K++ L+ + Q A G V
Sbjct: 227 GDVYVWGEVWCDGVLPDGS----VSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V +WG GRLGHG ++ F R P L++ L V A G H+
Sbjct: 283 TRQGEVFTWGEESGGRLGHGIDND---FSR------PHLVEFLAVNNVDFVACGEYHTCA 333
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGG 307
+ +G ++ +GD + L G P +S +V+ CG +H+ + TS G
Sbjct: 334 VSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNG 393
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-----------I 356
+L+T+G G LG G + + P VQ S +V+CG HTAA I
Sbjct: 394 KLFTFGDGTFGVLGHGDRESVPYPREVQI-LSGLKTIKVACGVWHTAAIIEVMSQSGTNI 452
Query: 357 SEGKILTWGWGGSH 370
S K+ TWG G H
Sbjct: 453 SSRKLFTWGDGDKH 466
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG GS E+ P SA ++ LACG T+ LT +G V+ G +GQ
Sbjct: 460 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 519
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + G L L L E V +IS G +H + +T E++ WG+ +NG+LG G
Sbjct: 520 LGNPLSDG-RLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 578
Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
+ PT VE L K + G F S+ +
Sbjct: 579 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 609
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S+ F TP+ ++ + V A G H A + G V+ +G+ + ++
Sbjct: 245 SVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGID 304
Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-S 330
N RP L+ L + + V CG YHTC +++ G+L+TWG ++ G LG G+ +V H
Sbjct: 305 NDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGT-EVSHWI 363
Query: 331 PERVQGPFSESPVDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGH 378
P+RV GP V V+CG H+A A S GK+ T+G GTF GH
Sbjct: 364 PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFG----DGTFGVLGH 408
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 19/244 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH S P + L+ + + G H+ +++ G+VY +G
Sbjct: 61 NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ Q R P I L + +V CG YH+ L+ E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG--GSHGTFSED 376
G+G SP+ ++ P QV+ G H+ ++ G I WG G G E+
Sbjct: 170 GLGIECQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 377 GHSS 380
G S
Sbjct: 229 GRFS 232
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLE 114
QLG++ EN +SLE
Sbjct: 221 QLGLNDENGRFSLE 234
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 162/344 (47%), Gaps = 32/344 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ + + V A E ++++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ + + I IP + C + +Q A G SV +T G V SWG +
Sbjct: 130 DEMERPLRRDIVIPKR--CAPKLVVRQVAAGGTHSVVLTREGHVWSWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++ENG ++ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
+P + L ++ GG+H+ LT GE+Y WG E+G LG G D
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V E + QVSCG H+ A++ +G+I ++G G HG
Sbjct: 293 PQKVNLLAGED-IIQVSCGGTHSVALTRDGRIFSFG-RGDHGRL 334
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 132/309 (42%), Gaps = 34/309 (11%)
Query: 86 LTETGCVYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
+ + V A G + GQLG+ N + +LEP + + +G +S AI
Sbjct: 1 MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVR-------SVVSGSRNSLAI 53
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
DG L+ WG N G LG + K IP++V+ L+ + QAA+G +AV G+
Sbjct: 54 CDDGTLFTWGWNQRGTLGHPPET-KTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRA 112
Query: 199 LSWGAGGSGRLGH--GQESSILGFLRS---TSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+WG G+ G G++ R P+L+ V+ AAG HS +
Sbjct: 113 YAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLV-------VRQVAAGGTHSVVL 165
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
G V+ +G + Q P + L + G +H L G L+ WG
Sbjct: 166 TREGHVWSWGQPWPPGDIKQ----ISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWG 221
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT- 372
+NE G LG G P VQG S + VD + GW TA +G++ WG G HG
Sbjct: 222 NNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRL 280
Query: 373 -FSEDGHSS 380
F ++ SS
Sbjct: 281 GFGDNDKSS 289
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G ++A G N++GQLG + S +P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRS-QPIPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T GE+Y WG+ +G+LG G +P KV L+G
Sbjct: 246 DSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII 305
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG G++
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRK 339
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L ++++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFTKQA 182
P +P K+ G F A
Sbjct: 340 VTTGQPLDVPVKIPPPEGQFNDAA 363
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LH C+++
Sbjct: 223 TP----------VRVAA---LHGMCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG GS + L SP ++ E ++ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 23/285 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G ++ +G ++ + P ++ +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV V+Q+ C
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQIVC 240
Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
G+ HT A+++ +L + WG + T+ + G S L L+P++
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN--TYGQLGTGSKNNL----LSPTQ 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 18/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ ++CG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + P I L+ V +QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L CG + LT+ G ++T G+ G LG G P R+
Sbjct: 240 YPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A S GK+ +G G S
Sbjct: 299 LMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSS 332
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 16/299 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP + + + + ++CG H+L L++ G V + G ND GQL
Sbjct: 65 GSNDYSQLG-HDLPTK-RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122
Query: 104 G-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G +E L + + K VVQI+ G +HS A+T GELY WG N GQLG+
Sbjct: 123 GHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND 182
Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P +K L + V+ AA G S + G V+ G A ++ ++ P
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
++ +L S +V CG HT S G++Y +G +G LG S L P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P ++ +Q + G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P+LI EL+ + + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A +K + Q R+ L+SK ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G LG+ S + L + P R+ P+ ++CG H+ IS+ G + WG
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAVFGWG 223
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A + G++Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QVSCG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60
Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+ G +S+ GH + R QL P
Sbjct: 61 VYACG----SNDYSQLGHDLPTK--RPQLIP 85
>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 386
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 157/333 (47%), Gaps = 28/333 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S S+ LACGGAH + LT G V+ G GQ
Sbjct: 20 WGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +L P +S V+ Q + G+ HS ++ G ++ G S GQLG G
Sbjct: 80 LGHGDILNITL-PKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTL 138
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ + P KV + K A G S+ + G +V +G+G G+LG +
Sbjct: 139 S--LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD------- 189
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R S P ++ L+ V+V +A HSA I +G+ + +G F G P
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRG------FCGGPDVHAP 243
Query: 282 -SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN-----ENGCLGIGSIDVLHSPERVQ 335
SL S L + EV G H +LT GE++ GS E L I S + L E+V
Sbjct: 244 QSLPSPLSF-REVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF--EKVP 300
Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
F V Q++ G +H+AA++E G++ TWGWG
Sbjct: 301 -DFDGVKVMQIAAGAEHSAAVTENGEVKTWGWG 332
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 24/298 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + + P + S F+ + A G +H+ F++++GC++ G FGQ
Sbjct: 72 WGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + S P ++S + V+ ++ G HS + ++ +G GQLG
Sbjct: 132 LGHGDTLSLS-TPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K + +P V L + + + + S A++ G+ SWG G F
Sbjct: 191 IKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRG---------------FC 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P+ + + + A G+ H+ + +G V+ G + Q+
Sbjct: 236 GGPDVHAPQSLPS--PLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSE 293
Query: 282 SLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+L K+P + ++ G H+ +T GE+ TWG E+G LG+G+ + SPE V
Sbjct: 294 ALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELV 351
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 17/230 (7%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG ++GQLG K +++P + L I A G +A+T GGKV +WG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSGGKVFTWG 73
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G SG+LGHG +I P+L+ + + AAAG+ HS + ++G ++
Sbjct: 74 RGSSGQLGHGDILNI---------TLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTC 124
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G+ + ++ + P+ +S + V CG H+ VL +G ++ +GS + G L
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 321 GIGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
G S I ++ P V G + V ++S H+AAIS +G+ +WG G
Sbjct: 185 GFSSDRIKSVNLPCVVSG-LKDVEVVRISANGDHSAAISADGQFFSWGRG 233
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LH C+++
Sbjct: 223 TP----------VRVAA---LHGMCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG GS + L SP ++ E ++ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 23/285 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G ++ +G ++ + P ++ +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV V+Q+ C
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQIVC 240
Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
G+ HT A+++ +L + WG + T+ + G S L L+P++
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN--TYGQLGTGSKNNL----LSPTQ 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 33/345 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E R A E ++ ++ G ++L +TE G ++ G N G
Sbjct: 10 WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G + S P ++ L+ V++ A G H+ + E+G ++ +G+ ++
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
+ +P + L ++ GG+H+ LT GE+Y WG E+G LG G D
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292
Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
P++VQ S + Q+SCG H+ A+ S+G++ ++G G HG
Sbjct: 293 VPQKVQ-LLSGEEIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL 335
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+ A G + GQLG+ N + + V + G +S AIT DG+L+ WG N
Sbjct: 6 AIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65
Query: 151 SNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G LG G K+ V P++V+ LS + QAA+G +AV G+ +WG G+
Sbjct: 66 QRGTLGHPAGTKSENV---PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 209 LGHGQESSILGFLRSTSEYTPR---LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFG 263
G E + + PR I + K V+ AAG HS + G V+ +G
Sbjct: 123 CGEEPEK------KDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ Q P + L + G +H L G L+ WG+NE G LG G
Sbjct: 177 QPWPPGDITQ----ISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHSS 380
P VQG + VD + GW TA G++ WG G HG F ++ SS
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG-RGEHGRLGFGDNDKSS 290
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
++ +A G H L L E G ++A G N++GQLG + S +P+ + GL +V I+ G
Sbjct: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAG 257
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS+A+T +GE+Y WG+ +G+LG G +P KV+ LSG Q + G SVA
Sbjct: 258 GWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVA 317
Query: 192 VTGGGKVLSWGAGGSGRLGHGQE 214
VT G++ S+G G GRLG+G++
Sbjct: 318 VTSDGRMFSFGRGDHGRLGYGRK 340
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ +L +A GG H+ LT+ G VY G + G+
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGR 280
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P ++ L +E+VQIS G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 281 LGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRK 340
Query: 161 AAKVIPIPTKVE 172
P ++
Sbjct: 341 VTTGQPEEVPID 352
>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
Length = 1698
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 160/323 (49%), Gaps = 28/323 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
++CG +H+ F+TE G ++ G N+ GQLG+ + G +P+ + LK E Q ++ G H
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGL-QIKGPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ T GE+ G NS+GQLGLG + + C K + G S A+T
Sbjct: 98 TLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI-KLLSAGDHTSAALTE 156
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
G++ WG +G+LG G +S L L KEL G + + G+ HSA +
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHAL------------LPKELNMGQSIHWVSCGYRHSALV 204
Query: 254 DENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
++G VY FG+ A ++ Q NH+ P + L +V CGG HT LT ELY
Sbjct: 205 TDSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLHSVLQVACGGKHTLALTED-ELY 262
Query: 311 TWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
+G E G LG+G+ + V SP V G F + V V+CG +H+A I++ +L G
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSPVAV-GHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGR 321
Query: 370 HGTFSEDGHSSGGQLDRGQLTPS 392
HG GH G + Q TP+
Sbjct: 322 HGKL---GH--GDENFTNQFTPT 339
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 153/287 (53%), Gaps = 31/287 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ I+ N+ P R+ LK ++ V IS G HS+ +T G L
Sbjct: 7 IPDTGAVFT-----FGKSKIANNV-----PSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+++G N+ GQLGL K P+ KV L G + A G + ++ T G++L+ G
Sbjct: 56 FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113
Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G + + F LR +Y P +K+ +AG SA + E+GR++++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLW 163
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
GD + ++ F +HA P ++ V CG H+ ++T G++Y++G + +G LG+
Sbjct: 164 GDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGL 223
Query: 323 GSIDVL-HS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+ + HS P+RV+ S V QV+CG KHT A++E ++ +G G
Sbjct: 224 SAHQLANHSYPQRVESLHS---VLQVACGGKHTLALTEDELYCFGGG 267
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 157/362 (43%), Gaps = 49/362 (13%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
++ +LK DI + G + R F ++G+ + G+LGL +PV +
Sbjct: 27 SRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVKVLK 84
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+++ACG HTL T G + A G N GQLG+ N S + LR + +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H S+A+T DG L++WG NS GQLG G + ++P E G + G+
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----KELNMGQSIHWVSCGYRH 200
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G V S+G GRLG L + + P+ ++ L V +++A G
Sbjct: 201 SALVTDSGDVYSFGESADGRLG-------LSAHQLANHSYPQRVESLHSV-LQVACGG-K 251
Query: 249 HSACIDENGRVYIFG----------------DRAVDKMLFQEGNHARRPSLISKLPYSEE 292
H+ + E+ +Y FG D V F++G
Sbjct: 252 HTLALTED-ELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTH------------- 297
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVSCGW 350
V CG H+ ++T G LYT+G +G LG G + + +P Q F E V V+CG
Sbjct: 298 VTCGEQHSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQR-FFEYSVMTVACGS 356
Query: 351 KH 352
H
Sbjct: 357 SH 358
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 9/259 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 46 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 106 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L ++ G
Sbjct: 166 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQL------ALSGNSA 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ + P
Sbjct: 219 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQ 278
Query: 283 LISKL-PYSEEVVCGGYHT 300
LI + + ++ CG YHT
Sbjct: 279 LIEGIGGHVSQIECGSYHT 297
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 24 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 82 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 141 LSEDGQVFSWGSNRQGQLGLGNNL--------CSQASPQKVKSLEGIPLAQVAAGGTHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 193 ALSLMGTSFGWGNNRSGQLAL-SGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 251
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
G+++T+G G S + HSP +G P V Q+ CG HT A
Sbjct: 252 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 300
Query: 356 -ISEGKILTWGWGGS 369
+ G++++ G G S
Sbjct: 301 VYTTGQVVSLGRGPS 315
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 134/262 (51%), Gaps = 23/262 (8%)
Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P R+ +G ++++ ++G HS + + +Y G NS GQ LG+K+ + P ++
Sbjct: 11 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQ--LGQKSPQSTKRPEPIQ 68
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + + G E SVAV G+V +WGAG G+LG G+ I + P I
Sbjct: 69 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPTKI 120
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKL 287
L G+K+ + G HS + E+G+V+ +G ++ L + + + SL +
Sbjct: 121 NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-EGI 179
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVD 344
P + +V GG H+ L+ G + WG+N +G L + + + ++ P + G V
Sbjct: 180 PLA-QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVV 237
Query: 345 QVSCGWKHTAAISE-GKILTWG 365
+SCG++HT+ ++E G++ T+G
Sbjct: 238 YISCGYEHTSVLTEDGQVFTFG 259
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 97 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 156
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 157 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 216
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I P + L + + G+E + +T G+V ++G S +L H S G
Sbjct: 217 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 276
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+LI+ + G +I + A + G+V G R
Sbjct: 277 ---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG---------------R 312
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTS 305
PS S + +E C TC+L++
Sbjct: 313 GPSCTSNATH-QEAACSDV-TCLLSA 336
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 16/222 (7%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++E +G+ +AA G S+ + +V S G G+LG Q+S S
Sbjct: 12 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSP-------QSTK 62
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
P I+ L V + + + G HS + GRV+ +G + ++ E + P+ I+
Sbjct: 63 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 122
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
L + +V CG YH+ L+ G++++WGSN G LG+G ++ SP++V+ P+
Sbjct: 123 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 181
Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQL 384
QV+ G H+ A+S ++GWG + G + G+S+ Q+
Sbjct: 182 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI 222
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ ++ + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLNDIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
A+S + ++ +W G +S GQL G+ PS+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQ 169
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ ++ +K +A GG H + LT G V++ G + G
Sbjct: 3043 GEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3102
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I LK K + I+ G HS+AI+ GEL+ WG G+LG G
Sbjct: 3103 KLGHDNRLSLD-RPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDN 3161
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V+ L G Q A G Q++A++ G V SWG G G+LG G
Sbjct: 3162 LTQLRP--KLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGG----- 3214
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P I+ L G+ V + G S + + G+VY +G ++ H
Sbjct: 3215 ----SEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHV 3270
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+L+ L + V G H T G++Y WG N++G G G+I V P V
Sbjct: 3271 RKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLN 3330
Query: 337 PFSESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 3331 -LEGVRVNRVACGSSHSIA 3348
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 138/292 (47%), Gaps = 20/292 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G D G+LG G P I L+ KE+V I+ G
Sbjct: 4059 AVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCD-HPQLIDALQGKEIVDIACGGA 4117
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+A+T GE+Y WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4118 HSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKP--KLVETLIGFKVIDIACGSGDAQTLC 4175
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4176 ITDDDNVWSWGDGDYGKLGRGG---------SDGCKIPMKIESLAGLGVVKVECGSQFSV 4226
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGE 308
+ +G VY +G ++ H R P I+ L ++++C G H + GE
Sbjct: 4227 ALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAAL-QGKKIICIATGSLHCVACSDLGE 4285
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
++TWG N+ G LG G+++ +H P R+ +++V+CG H+ A S K
Sbjct: 4286 VFTWGDNDEGQLGDGTMNAIHRP-RLVVTLQGKNINRVACGSAHSLAWSTNK 4336
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG + S RP + A + ++ +ACG +H+ ++ TG ++ GL ++G+
Sbjct: 3096 WGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGR 3155
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N+ L + L +VQ++ G + A++ +G ++ WG G+LG G
Sbjct: 3156 LGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG-- 3213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G+ G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3214 GSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHV--- 3270
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L K+ A G LH C + G+VY +GD Q+GN
Sbjct: 3271 ------RKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHG----QQGNGTIL 3320
Query: 279 --RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
R+PSL+ L V CG H+ T+
Sbjct: 3321 VNRKPSLVLNLEGVRVNRVACGSSHSIAWTT 3351
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 144/315 (45%), Gaps = 37/315 (11%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C + + +K + C L LT TG VY + YS E P +I
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYI--------------MYYSSETQCPEQI 513
Query: 119 SGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G KE+ +++ HS A++ DG++Y WG G+LG G ++ PTK+ L
Sbjct: 514 EGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSR--DQPTKITELV 571
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + G S AVT G+V +WG G GRLGHG S P L+ L
Sbjct: 572 GKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGT---------SEDHTVPTLVVGL 622
Query: 236 EG-VKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
+ V IA +G + + G V+ +GD K+ + ++ P LI KL E
Sbjct: 623 KDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVA 682
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
V CG + LT G +YTWG +N LG GS + + P+ V+G + + +V+ G
Sbjct: 683 RVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG-LNGKCIKKVAVGSG 741
Query: 352 HTAAIS-EGKILTWG 365
H A++ +G++ WG
Sbjct: 742 HVLALTDDGEVYGWG 756
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 140/301 (46%), Gaps = 20/301 (6%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P F+ + LA G H+L L+ G VY+ G D G+LG +N +P +I+
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRD-QPTKIT 568
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K V+ IS G +S+A+T GE+Y WG+ + G+LG G +P T V L F
Sbjct: 569 ELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVP--TLVVGLKDYF 626
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++AVT G V SWG LG S TP+LI++L+
Sbjct: 627 IVDIACGSGDAQTLAVTNTGLVFSWG---------DGGYGKLGTGGSDGSKTPKLIEKLQ 677
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
++V G S + ++G VY +G ++ NH R P L+ L ++V
Sbjct: 678 DIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVA 737
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G H LT GE+Y WG N+NG +G S + P + ++ VD + CG +
Sbjct: 738 VGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVD-IDCGPNQSI 796
Query: 355 A 355
A
Sbjct: 797 A 797
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ P + A + + +ACGGAH+ +T G +Y G +G+
Sbjct: 4079 WGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGR 4138
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ L + + +V+ I+ +G + IT D ++ WG G+LG G
Sbjct: 4139 LGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-- 4196
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4197 GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHV--- 4253
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I L+G K+ A G LH + G V+ +GD ++ N R
Sbjct: 4254 ------RHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHR 4307
Query: 281 PSLISKL--PYSEEVVCGGYHT 300
P L+ L V CG H+
Sbjct: 4308 PRLVVTLQGKNINRVACGSAHS 4329
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 151/332 (45%), Gaps = 23/332 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG P C A L G L +T G VYATG G+
Sbjct: 3973 WGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGR 4032
Query: 103 LGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG+ LE ++ +KK V +++G H A++ DG++Y WG+ +G+LG G
Sbjct: 4033 LGLGGTDTILTPTLLESIQHIFIKK--VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG 4090
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K P ++ L G A G S AVT GG++ +WG G GRLGHG
Sbjct: 4091 NKNG--CDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGD----- 4143
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P+L++ L G KV A +G + CI ++ V+ +GD K+ +
Sbjct: 4144 ----SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD 4199
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ P I L +V CG + LT G +YTWG + LG GS + + P+++
Sbjct: 4200 GCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKI 4259
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ ++ G H A S+ G++ TWG
Sbjct: 4260 AA-LQGKKIICIATGSLHCVACSDLGEVFTWG 4290
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 50/352 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTLFLTE-TGCVYATG 96
+WG D +LG G S+ + V S SL AL GG+ +LF+ G +YA G
Sbjct: 2989 VWGLNDKDQLG-GLKGSKVKVPVYS----ESLTALKPIHIAGGSKSLFIVSYDGKLYACG 3043
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNS 151
G+LG+ S N+ P +++ L + V++ + +G H+ A+T+DG+++ WG+
Sbjct: 3044 EGTNGRLGLGHSNNVA---TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3100
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+LG + + + P +E L + A G S A++ G++ +WG G GRLGH
Sbjct: 3101 DGKLGHDNRLS--LDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGH 3158
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDK 269
G + ++ P+L+K L G + A G + + G V+ +GD K
Sbjct: 3159 GD---------NLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGK 3209
Query: 270 MLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ R S +P++ E + CG + LT G++YTWG + L
Sbjct: 3210 L-------GRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRL 3262
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHG 371
G GS + P V+ SE + V+ G H A +G++ WG HG
Sbjct: 3263 GHGSDQHVRKPTLVES-LSEKKIVHVAVGALHCLCATDQGQVYAWG-DNDHG 3312
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 27/293 (9%)
Query: 89 TGCVYATGLNDFGQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+G +Y G N GQLG E I S E L S L+ VQ+ G A+T DG++
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEAL--SALRP--VQLVGGEQTLLAVTSDGKV 4022
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWG 202
Y LG I PT +E + IF K+ A+ G + +A++ GKV SWG
Sbjct: 4023 Y--ATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWG 4080
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G G+LGHG ++ P+LI L+G ++ A G HSA + G +Y +
Sbjct: 4081 EGDDGKLGHGNKNGC---------DHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTW 4131
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENG 318
G ++ + +P L+ L + ++ CG T +T +++WG + G
Sbjct: 4132 GKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4191
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
LG G D P +++ + V +V CG + + A++ G + TWG G H
Sbjct: 4192 KLGRGGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYH 4243
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G SR +P + ++ ++CG ++ +T +G VY G ++G+
Sbjct: 545 WGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGR 604
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
LG + +++ P + GLK +V I+ +G + A+T G ++ WG G+LG
Sbjct: 605 LGHGTSEDHTV-PTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGG 663
Query: 158 --GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K+I E L I + G + S+A+T G V +WG G + RLGHG E+
Sbjct: 664 SDGSKTPKLI------EKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSEN 717
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
+ P+L++ L G +K A G H + ++G VY
Sbjct: 718 HV---------RFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVY 753
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + KV IPT E LS + Q G + +AVT GKV +
Sbjct: 3968 GTIYGWGHNHRGQLG-GVEGPKV-KIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYAT 4025
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G +IL TP L++ ++ + +K A +G H + +G+V
Sbjct: 4026 GYGAGGRLGLGGTDTIL---------TPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKV 4076
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ N P LI L E ++ CGG H+ +T+GGE+YTWG
Sbjct: 4077 YSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRY 4136
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G + P+ V+ +D ++CG T I++ + W WG G +G
Sbjct: 4137 GRLGHGDSEDQMKPKLVETLIGFKVID-IACGSGDAQTLCITDDDNV-WSWGDGDYGKL 4193
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 26/267 (9%)
Query: 115 PLRISGLK---KEVVQISTGYHHSSAITV----DGELYMWGKNSNGQLGLGKKAAKVIPI 167
PL +S L +E+ ++ T SS + ++++WG N QLG G K +KV +
Sbjct: 2951 PLNVSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLG-GLKGSKV-KV 3008
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P E L+ + A G + V+ GK+ + G G +GRLG G +++
Sbjct: 3009 PVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNV---------A 3059
Query: 228 TPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
TP + L +K A +G H+ + +G+V+ +G+ K+ RP +I
Sbjct: 3060 TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIE 3119
Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
L ++ CG H+ ++S GEL+TWG E G LG G P+ V+ V
Sbjct: 3120 ALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIV 3179
Query: 344 DQVSCGWK--HTAAIS-EGKILTWGWG 367
QV+CG + T A+S EG + +WG G
Sbjct: 3180 -QVACGSRDAQTLALSAEGLVFSWGDG 3205
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG GS P + +K +A G H L LT+ G VY G ND GQ
Sbjct: 703 WGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQ 762
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
+G + S EP ++ L+ K +V I G + S A
Sbjct: 763 VGETSETNVS-EPTLLTLLQGKNIVDIDCGPNQSIA 797
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G++ + RP + + ++ +ACG AH+L + AT
Sbjct: 4289 WGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSAT------H 4342
Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELY-MWGKNSNGQL 155
L + + Y L + + L+ +V + +H S ++ + ++ M G+ S QL
Sbjct: 4343 LPVDAPMEYDLVRDISLPTLRNRLVLL---HHFSELVSPNVAMFPMEGEGSLDQL 4394
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGEL+ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LH C+++
Sbjct: 223 -TP----------VRVAA---LHGVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG GS + L SP ++ E ++
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G ++K + G
Sbjct: 33 EAIYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKRIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLISKLPYSE--EVVCGGYHTCVL 303
H E+G VY +G ++ N P + + L + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GEL+ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 33/345 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E R A E ++ ++ G ++L +TE G ++ G N G
Sbjct: 10 WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G + S P ++ L+ V++ A G H+ + E+G ++ +G+ ++
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
+ +P + L ++ GG+H+ LT GE+Y WG E+G LG G D
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292
Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
P++VQ S + Q+SCG H+ A+ S+G++ ++G G HG
Sbjct: 293 VPQKVQ-LLSGEEIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL 335
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+ A G + GQLG+ N + + V + G +S AIT DG+L+ WG N
Sbjct: 6 AIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65
Query: 151 SNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G LG G K+ V P++V+ LS + QAA+G +AV G+ +WG G+
Sbjct: 66 QRGTLGHPAGTKSENV---PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122
Query: 209 LGHGQESSILGFLRSTSEYTPR---LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFG 263
G E + + PR I + K V+ AAG HS + G V+ +G
Sbjct: 123 CGEEPEK------KDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ Q P + L + G +H L G L+ WG+NE G LG G
Sbjct: 177 QPWPPGDITQ----ISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHSS 380
P VQG + VD + GW TA G++ WG G HG F ++ SS
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG-RGEHGRLGFGDNDKSS 290
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
++ +A G H L L E G ++A G N++GQLG + S +P+ + GL +V I+ G
Sbjct: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPIPVQGLSGLTLVDIAAG 257
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS+A+T +GE+Y WG+ +G+LG G +P KV+ LSG Q + G SVA
Sbjct: 258 GWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVA 317
Query: 192 VTGGGKVLSWGAGGSGRLGHGQE 214
VT G++ S+G G GRLG+G++
Sbjct: 318 VTSDGRMFSFGRGDHGRLGYGRK 340
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ +L +A GG H+ LT+ G VY G + G+
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGR 280
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P ++ L +E+VQIS G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 281 LGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRK 340
Query: 161 AAKVIP--IPTKVECLSG 176
P +P + G
Sbjct: 341 VTTGQPEEVPIDIPPPRG 358
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 161/335 (48%), Gaps = 20/335 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE---KHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +G+LGLG +E+ + ++ S E ++ +ACG HTLFLT G VYA G ND
Sbjct: 6 WGDASHGQLGLGGIENE-QILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNND 64
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + PL I L+ VV QI+ G HS A+T G++ WG N GQ+G
Sbjct: 65 HHQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-H 120
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
VI +P + L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 121 STDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL- 179
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P + + G+ + A G HS I ++ V+ +G ++ + +
Sbjct: 180 -----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234
Query: 279 RRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
PS + + V CG ++ LT+ G ++T G+ G LG G + P R+
Sbjct: 235 AYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIP-RMVI 293
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ ++G G S
Sbjct: 294 ELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS 328
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 20/301 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D+ +LG L ++ RP+ + + + +ACG H++ LTE G + + G ND GQ+
Sbjct: 61 GNNDHHQLG-HELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118
Query: 104 GIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G S +N L + + + VVQI+ G +HS A+T GELY WG N GQLG+ ++
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSP 176
Query: 163 KVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P P ++ + GI A G S ++ V WG G+LG E
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ---- 232
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P +K + + V+ G +S + G V+ G ++ N+
Sbjct: 233 -----NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEM 287
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P ++ +L S +V CG HT L SGG +Y++G +G LG + P+ V G
Sbjct: 288 IPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIG 347
Query: 337 P 337
P
Sbjct: 348 P 348
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 114/251 (45%), Gaps = 23/251 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG S+GQLGLG + I +P+++E +Q A G ++ +T G+V + G
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LGH + P I EL+ V A G HS + E G++ +G
Sbjct: 63 NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
D ++ N I + S VV CG H+ LTS GELY+WGSN G L
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171
Query: 321 GIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG----GSHGTF 373
G+ S D+ HS P R+ P+ ++CG H+ IS+ + +GWG G G
Sbjct: 172 GVQSPKDLPHSNAPLRLTTILG-IPLATIACGGNHSFLISKSSAV-FGWGKNTCGQLGLN 229
Query: 374 SEDGHSSGGQL 384
E + QL
Sbjct: 230 DEQNRAYPSQL 240
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL ++R P + ++ + CG +++FLT G V+ G ++GQ
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + + + I + + Q++ G H+ A+ G +Y +G ++GQLG
Sbjct: 278 LGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTI 337
Query: 162 AKVIP 166
++ +P
Sbjct: 338 SQTLP 342
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 156/347 (44%), Gaps = 20/347 (5%)
Query: 43 WGNGDYGRLGLGSL----ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG G+LG+ L S P A ++ ++CG HT L G V G N
Sbjct: 6 WGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMCGAN 65
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
D GQLG + G L + + V+ Q+S G H+ A+T G++ WG+N GQ GL
Sbjct: 66 DRGQLG-QDRPGSELA--HVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGL 122
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P ++ LS Q A G S+A+T G++ +WG G+LG G
Sbjct: 123 STGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPG-- 180
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
R+ P+ + L GV ++ A G HS + +G V+ +G ++
Sbjct: 181 ----RTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTED 236
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P+ + L + + CG +T +LT+ G L+ +G G LG GS +P VQ
Sbjct: 237 RVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQ 296
Query: 336 GPFSESPVDQVSCGWKHTAAIS--EGKILTWGWGGSHGTFSEDGHSS 380
G F S + QV+CG +HT + G+ + G GS G D SS
Sbjct: 297 G-FLGSEITQVACGRQHTLVLEGRTGRFFSLGQ-GSKGQLGLDNDSS 341
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 51/287 (17%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++ WG +GQLG+ V + P +V L+G ++ + G + + G V+
Sbjct: 3 VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62
Query: 202 GAGGSGRLGHGQESSILGFLRST------------------------------------- 224
GA G+LG + S L + +T
Sbjct: 63 GANDRGQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGL 122
Query: 225 ------SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNH 277
+ PR +K L +V A G +HS + +GR++ +GD + ++ + G
Sbjct: 123 STGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRT 182
Query: 278 ARR--PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
R P +S LP + CGG+H+ L+ G ++ WG N G LG+G+ + SP
Sbjct: 183 LYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTP 242
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
++ V ++CG +TA ++ L GS G HS+
Sbjct: 243 LKN-LKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSN 288
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 32/349 (9%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C W S L A WG + G+LGLG+ E R P + +K +ACG +T
Sbjct: 204 CGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAI 263
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAIT-VDGE 143
LT +G ++ G GQLG + + P + G L E+ Q++ G H+ + G
Sbjct: 264 LTASGGLFLFGQGSEGQLGHGSH-SNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGR 322
Query: 144 LYMWGKNSNGQLGLGKKAAK--VIPIPTKVECLSGIFTKQAALGFEQSVAVTG----GGK 197
+ G+ S GQLGL ++K P+P E S + + E+S ++ G GG
Sbjct: 323 FFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPS---STEGCSNGEESRSIIGSIFAGGD 379
Query: 198 ----VLSWGAGGSGRLGHGQ-----ESSIL--GFLRSTSEYTPRL--IKELEGVKVKIAA 244
++S G L + E +L L+ SE +P L K ++ +++ +++
Sbjct: 380 QSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSS 439
Query: 245 AGFLHSACI--DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
L+++ + +G +++FG + ++ ++ P + +E +V CG HT
Sbjct: 440 PACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHT 499
Query: 301 CVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VL G Y+ G G LG+ + V GP+ E+P C
Sbjct: 500 LVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLVPGPW-EAPSSTEGC 547
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 142/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
K+ CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LH C+++
Sbjct: 223 TP----------VRVAA---LHGMCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG GS + L SP ++ E ++ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +I+ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 134/285 (47%), Gaps = 23/285 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G ++ +G ++ + P I+ +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV V+Q+ C
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQIVC 240
Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
G+ HT A+++ +L + WG + T+ + G S L L+P++
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN--TYGQLGTGSKNNL----LSPTQ 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 149/330 (45%), Gaps = 17/330 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S+ + PV+ S + + ++ G H+L + G YA G N G+
Sbjct: 73 WGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGR 132
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS---TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + G S+ L +G V IS G HS A+ +G++Y WG N +GQLG G
Sbjct: 133 LGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGT 192
Query: 160 KAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A +P+ + +G+ Q + G S+A+ GK +WG G+LG G S
Sbjct: 193 TLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSIS--- 249
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
R+ + P L+ GV +AG LHS + +G+ Y +G+ ++ +
Sbjct: 250 ---RTPA---PALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSS 303
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P L+S + +V G H+ + + G Y WG N NG LG +I P V
Sbjct: 304 LAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTA 363
Query: 337 PFSESPVDQVSCGWKHT-AAISEGKILTWG 365
P + ++ G H+ A S+ TWG
Sbjct: 364 PDGVT-FTRIEAGGLHSLTAASDENTYTWG 392
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 13/295 (4%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G H+L + G +YA G N GQLG + + S+ L + Q+S G HS
Sbjct: 54 VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTG 194
A+ DG Y WG+N++G+LG G +P+ + SG+ Q G S+AV
Sbjct: 114 LAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGS 173
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + SWG SG+LG G + L+ ++ P GV +AG HS I
Sbjct: 174 NGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP------AGVTFSQVSAGDRHSLAIG 227
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYT 311
NG+ Y +G+ ++ + P+L+S P +V G H+ + S G+ Y
Sbjct: 228 SNGKTYAWGEARGGQLGIGSISRTPAPALVSA-PAGVSFTQVSAGDLHSLAVGSDGKAYA 286
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
WG+N++G LG + +P V P V QVS G H+ AI ++G WG
Sbjct: 287 WGNNDSGQLGNATTTSSLAPVLVS-PMGGLAVTQVSAGADHSLAIGADGNAYAWG 340
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 137/297 (46%), Gaps = 29/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
WG GRLG G+ P++ SA S + + GG H+L + G +Y+ G N
Sbjct: 125 WGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNR 184
Query: 100 FGQLGISENIGYSLEPLRIS--GLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG + S+ PL++S + V Q+S G HS AI +G+ Y WG+ GQL
Sbjct: 185 SGQLGDGTTLASSV-PLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQL 243
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+G + P P V +G+ Q + G S+AV GK +WG SG+LG+
Sbjct: 244 GIGSISRT--PAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNAT-- 299
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+TS P L+ + G+ V +AG HS I +G Y +G ++ G
Sbjct: 300 -------TTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQL----G 348
Query: 276 NHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
N+ S + + + + V GG H+ S YTWG+N G LG G+ D
Sbjct: 349 NNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSD 405
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 133/317 (41%), Gaps = 49/317 (15%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
+F S+ AL+ L + +G +A FG G + +SG+ VV
Sbjct: 3 SFRVASVVALSA-----LLVGMSGSAFAAPAETFGS-------GPTAGGTTVSGVLPGVV 50
Query: 127 --QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
Q+S G +HS A+ DG +Y WG NS+GQLG +P+ V G+ Q +
Sbjct: 51 FTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPV--LVSTPDGVTFTQVSA 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE---LEGVKVK 241
G + S+AV G +WG GRLG+G ST P L+ GV +
Sbjct: 109 GADHSLAVGSDGNAYAWGRNTDGRLGNGT---------STGSSVPLLVSAGAVPSGVTIS 159
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----------- 290
AG HS + NG +Y +G + G +L S +P
Sbjct: 160 QVMAGGFHSLAVGSNGDIYSWGYN-------RSGQLGDGTTLASSVPLKVSAGAVPAGVT 212
Query: 291 -EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+V G H+ + S G+ Y WG G LGIGSI +P V P S QVS G
Sbjct: 213 FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVS-FTQVSAG 271
Query: 350 WKHTAAI-SEGKILTWG 365
H+ A+ S+GK WG
Sbjct: 272 DLHSLAVGSDGKAYAWG 288
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D G+LG + S PV+ S ++ ++ G H+L + G YA GLN GQ
Sbjct: 287 WGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQ 346
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + I S P+ ++ +I G HS D Y WG NS GQLG G
Sbjct: 347 LG-NNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSD 405
Query: 162 AKVIPI 167
++P+
Sbjct: 406 GSLVPV 411
>gi|147920282|ref|YP_685948.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
gi|110621344|emb|CAJ36622.1| predicted regulator of chromosome condensation [Methanocella
arvoryzae MRE50]
Length = 451
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 13/285 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +YG+LG G+ + V + + A++ G H L L G V+A G N FGQ+
Sbjct: 100 GDNEYGQLGDGTRVDSSKAVQVQCLSE--VVAISAGDCHNLALKRDGTVWAWGCNLFGQI 157
Query: 104 GISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G ++N+G+ L P+++ GL V +IS GY S AIT DG ++ WG N GQ+G G K
Sbjct: 158 G-NDNVGHDELTPVQVPGLSG-VKEISAGYMGSKAITGDGTVWAWGINEYGQIGDGTKEI 215
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + +S I T + + S+A+ G V +WG G G+LG E ++ L
Sbjct: 216 RSLPVRISINNVSAIDTGE----YGTSIALKSDGSVWTWGNNGQGQLGDPAEDTLSMMLP 271
Query: 223 STSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNHA 278
++ + RL+ G V +AG +S + ++G ++++G+ + + G +
Sbjct: 272 VSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGENQEGRFGNGLKFGRDS 331
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L V G + L+ G +Y WG N G +G G
Sbjct: 332 IRPVIVPGLNNIVSVKAGASYMLALSDDGTVYGWGKNIFGAVGNG 376
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT-LFLTETGCVYATGLNDFG 101
WG +YG++G G+ E R PV S +++ A+ G T + L G V+ G N G
Sbjct: 200 WGINEYGQIGDGTKEIRSLPVRISI---NNVSAIDTGEYGTSIALKSDGSVWTWGNNGQG 256
Query: 102 QLGISENIGYSLEPLRISGLKKE------------VVQISTGYHHSSAITVDGELYMWGK 149
QLG S+ L +S L E V +S G +S A+ DG L++WG+
Sbjct: 257 QLGDPAEDTLSMM-LPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGE 315
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N G+ G G K + P V L+ I + +A G +A++ G V WG G +
Sbjct: 316 NQEGRFGNGLKFGRDSIRPVIVPGLNNIVSVKA--GASYMLALSDDGTVYGWGKNIFGAV 373
Query: 210 GHGQES 215
G+G+ S
Sbjct: 374 GNGERS 379
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEK---------HSLKALACGGAHTLFLTETGC 91
WGN G+LG + + S PV E+ +++ +++ G ++L + + G
Sbjct: 250 WGNNGQGQLGDPAEDTLSMMLPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGT 309
Query: 92 VYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
++ G N G+ G G S+ P+ + GL +V + G + A++ DG +Y WGKN
Sbjct: 310 LWVWGENQEGRFGNGLKFGRDSIRPVIVPGLNN-IVSVKAGASYMLALSDDGTVYGWGKN 368
Query: 151 SNGQLGLGKKAAKVI 165
G +G G+++ V+
Sbjct: 369 IFGAVGNGERSETVV 383
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 36/334 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG- 101
WG G G+LG P + + + +K +ACG T LT++G ++ G N +G
Sbjct: 329 WGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGG 388
Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L E G P +ISG + ++ G H++A++ G+L+ +G + G LG G
Sbjct: 389 NLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGN 448
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-----------GGKVLSWGAGGSGR 208
+ + P +VE L G++ K A G + A+ GGK+ +WG G GR
Sbjct: 449 --LQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGR 506
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGH L P + +L + G + + + G++Y G
Sbjct: 507 LGHADLEKKL---------QPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHG 557
Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN + I+ K + +E+ G YH LTSGG +YTWG NG LG+
Sbjct: 558 QL----GNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGL 613
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G+++ + P V+ + V ++CG TAAI
Sbjct: 614 GNVEDRNVPTLVEA-LRDRQVQSIACGSNLTAAI 646
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 25/257 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V IS G +H++ IT GE++ WG+ S G+ LG K + PT VE L G K A
Sbjct: 306 DVRNISLGRNHAALITKRGEVFCWGEGSRGK--LGHKVDMDVSSPTIVESLDGFLVKFVA 363
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKI 242
G Q+ A+T G++ WG G +++ R+ S++ PR I L GV +
Sbjct: 364 CGEYQTCALTDSGELFVWGENKYG-------GNLVCEERTGSQWLPRQISGPLAGVSISN 416
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHT 300
A G H+A + +G+++ +GD + P + L + + V CG +HT
Sbjct: 417 VACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHT 476
Query: 301 CVLTS-----------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ GG+L+TWG + G LG ++ P V E QVSCG
Sbjct: 477 AAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCV-AQLVEHDFVQVSCG 535
Query: 350 WKHTAAISE-GKILTWG 365
T A++ GKI T G
Sbjct: 536 RMLTVALTRTGKIYTMG 552
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 27/312 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ ++ G H +T+ G V+ G G+LG ++ S P + L +V+ ++
Sbjct: 306 DVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVS-SPTIVESLDGFLVKFVAC 364
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
G + + A+T GEL++WG+N G + ++ +P ++ L+G+ A G +
Sbjct: 365 GEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHT 424
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
AV+ G++ ++G G G LGHG L+S S P+ ++ L+G+ VK A G H
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGN-------LQSVSH--PKEVESLKGLWVKSVACGSWH 475
Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCG 296
+A I + G+++ +GD ++ + +P+ +++L + +V CG
Sbjct: 476 TAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCG 535
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
T LT G++YT GS+ +G LG S V+G E V ++S G H AA+
Sbjct: 536 RMLTVALTRTGKIYTMGSSVHGQLGNPQAKN-KSIAIVEGKLKEEFVKEISSGSYHVAAL 594
Query: 357 SE-GKILTWGWG 367
+ G + TWG G
Sbjct: 595 TSGGSVYTWGKG 606
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + +LG + +T G+V WG G G+LGH + +
Sbjct: 295 LPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDV--------- 345
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
+P +++ L+G VK A G + + ++G ++++G+ L E + P I
Sbjct: 346 SSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQI 405
Query: 285 SKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
S P + V CG +HT ++S G+L+T+G G LG G++ + P+ V+
Sbjct: 406 SG-PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVES-LKG 463
Query: 341 SPVDQVSCGWKHTAAISE------------GKILTWGWG 367
V V+CG HTAAI + GK+ TWG G
Sbjct: 464 LWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDG 502
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+L++ + V+ + G H+A I + G V+ +G+ + K+ + P+++ L
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355
Query: 289 --YSEEVVCGGYHTCVLTSGGELYTWGSNENG----CLGIGSIDVLHSPERVQGPFSESP 342
+ V CG Y TC LT GEL+ WG N+ G C L P ++ GP +
Sbjct: 356 GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWL--PRQISGPLAGVS 413
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+ V+CG HTAA+ S G++ T+G GTF GH
Sbjct: 414 ISNVACGDWHTAAVSSSGQLFTYG----DGTFGVLGH 446
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 149/321 (46%), Gaps = 22/321 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + +P + + +K +A GG H L LT G V++ G + G
Sbjct: 2710 GEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDG 2769
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I Y P + LK K + ++ G HS+A+T GELY WG G+LG G
Sbjct: 2770 KLGHGNKISYD-RPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDN 2828
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V LS Q A G Q++A+T V SWG G G+LG G
Sbjct: 2829 VPQL--KPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG----- 2881
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ ++ L +V G S + +NG+V+ +G ++ +H
Sbjct: 2882 ----SDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV 2937
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R P ++ +L +V G H +T GE+Y WG N++G G G+ V P V+G
Sbjct: 2938 RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRG 2997
Query: 337 PFSESPVDQVSCGWKHTAAIS 357
+ V+CG H+ A S
Sbjct: 2998 ---LEAITNVACGSSHSVAWS 3015
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 157/333 (47%), Gaps = 24/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +C A +L+ + GG TLF LT G VYATG
Sbjct: 3624 WGHNHRGQLGGVEGAKVKTATICDALT--ALRPVQIVGGEQTLFALTSDGKVYATGYGAG 3681
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P I L+ +V +++G H A+T G+++ WG+ +G+LG
Sbjct: 3682 GRLGIGGTESVS-TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH 3740
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G KA + P +E L A G S +T G++ +WG G GRLGHG
Sbjct: 3741 GSKA--LCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGD---- 3794
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+ ++EL G V A +G + C+ +G V+ +GD K+
Sbjct: 3795 -----SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGS 3849
Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L + +V CG + LT+ G +YTWG + LG GS D + P+
Sbjct: 3850 DGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQA 3909
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V QV+ G H A ++ G++ TWG
Sbjct: 3910 VQGALQGKRVIQVAVGSLHCVACTDSGEVFTWG 3942
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 133/292 (45%), Gaps = 19/292 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L LT +G V++ G D G+LG P I L+ K VV ++ G
Sbjct: 3710 AVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSK-ALCERPKLIESLRDKHVVSVACGGA 3768
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GELY WGK G+LG G ++ P KVE L+G + G Q++
Sbjct: 3769 HSACITASGELYTWGKGRYGRLGHGDSEDQLKP--KKVEELAGHNVLDVACGSGDAQTLC 3826
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
V+ G V SWG G G+LG G S P+ I L+ V G S
Sbjct: 3827 VSRDGLVWSWGDGDYGKLGRGG---------SDGCKFPQKIDSLQNAGVIKVECGSQFSV 3877
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+ G VY +G ++ +H RRP + + V+ G H T GE
Sbjct: 3878 ALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGE 3937
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
++TWG N+ G LG GS + + P+ V +++V+CG HT + S K
Sbjct: 3938 VFTWGDNDEGQLGDGSTNAIQRPKLV-ASLKGKKMNRVACGSAHTVSWSTSK 3988
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 154/311 (49%), Gaps = 28/311 (9%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
+ LT ++ Y++K K+ G + ++ T+ R + WG G+ G+LG G+ S RP
Sbjct: 2729 KPLTDLSPYFIK---KVAVHSG-GRHALALTIDGRVFS-WGEGEDGKLGHGNKISYDRPK 2783
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
+ + + ++ +ACG +H+ +T +G +Y G ++G+LG +N+ L+P ++ L
Sbjct: 2784 LVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVP-QLKPKQVRALSH 2842
Query: 124 E-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
E VVQ++ G + A+T +Y WG G+LG G +P VE L+
Sbjct: 2843 ERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGS--SLPQNVETLNSQQVI 2900
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A++ GKV +WG G RLGHG +S + P++++EL V
Sbjct: 2901 QVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV---------RWPQVVEELADKNV 2951
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN----HARRPSLISKLPYSEEVVCG 296
+ G LH + + G VY +GD Q+GN R+P+++ L V CG
Sbjct: 2952 IQVSVGALHCIAVTDRGEVYAWGDNDHG----QQGNGNTTVNRKPAIVRGLEAITNVACG 3007
Query: 297 GYHTCVLTSGG 307
H+ +S G
Sbjct: 3008 SSHSVAWSSTG 3018
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 18/264 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG GS RP + + + ++ACGGAH+ +T +G +Y G +G+
Sbjct: 3730 WGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGR 3789
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L+P ++ L V+ ++ G + + V DG ++ WG G+LG G
Sbjct: 3790 LGHGDSED-QLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRG- 3847
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P K++ L + G + SVA+T G V +WG G RLGHG E +
Sbjct: 3848 -GSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHV-- 3904
Query: 220 FLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ ++ L+G +V A G LH ++G V+ +GD ++ N
Sbjct: 3905 -------RRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAI 3957
Query: 279 RRPSLISKL--PYSEEVVCGGYHT 300
+RP L++ L V CG HT
Sbjct: 3958 QRPKLVASLKGKKMNRVACGSAHT 3981
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 142/294 (48%), Gaps = 41/294 (13%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V+ GLND QLG SE I +L+P+ I+G K + +S
Sbjct: 2654 VFVWGLNDKDQLGGLKGSKIKEPKFSEVIS-NLKPMNIAGGSKSLFIVSH---------- 2702
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG+++ G+ +NG+LGLG P P + LS F K+ A+ G ++A+T G+V
Sbjct: 2703 DGKVFACGEGTNGRLGLGHSHNVAQPKP--LTDLSPYFIKKVAVHSGGRHALALTIDGRV 2760
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG + S P+L++ L+ +++ A G HSA + +G
Sbjct: 2761 FSWGEGEDGKLGHGNK---------ISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGE 2811
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
+Y +G ++ + +P + L + +V CG T LT +Y+WG
Sbjct: 2812 LYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGD 2871
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ G LG G D P+ V+ S+ V QV CG + + A+S+ GK+ TWG G
Sbjct: 2872 GDFGKLGKGGSDGSSLPQNVETLNSQQ-VIQVECGAQFSLALSKNGKVWTWGKG 2924
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 15/234 (6%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ ++++WG N QLG G K +K I P E +S + A G + V+ GKV
Sbjct: 2649 NIECKVFVWGLNDKDQLG-GLKGSK-IKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKV 2706
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+ G G +GRLG G ++ + ++ +P IK KV + + G H+ + +GR
Sbjct: 2707 FACGEGTNGRLGLGHSHNV-AQPKPLTDLSPYFIK-----KVAVHSGG-RHALALTIDGR 2759
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
V+ +G+ K+ RP L+ L +V CG H+ +TS GELYTWGS E
Sbjct: 2760 VFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGE 2819
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISEGK-ILTWGWG 367
G LG G P++V+ S V QV+CG + T A++E + +WG G
Sbjct: 2820 YGRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHWVYSWGDG 2872
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 73/305 (23%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G ++ WG N GQLG G + AKV
Sbjct: 3619 GVIHGWGHNHRGQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATG 3677
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E L + Q A+ G + +A+T G V SWG G G+
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ++ P+LI+ L V A G HSACI +G +Y +G
Sbjct: 3738 LGHGSKALC---------ERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYG 3788
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P + +L +V CG T ++ G +++WG + G LG G
Sbjct: 3789 RLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGG 3848
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 383
D P+++ + V +V CG + + A++ G + TWG G H GH S
Sbjct: 3849 SDGCKFPQKIDS-LQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRL----GHGSEDH 3903
Query: 384 LDRGQ 388
+ R Q
Sbjct: 3904 VRRPQ 3908
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG GS + RP + ++ + + +ACG AHT+
Sbjct: 3941 WGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 366 WGGSHG 371
G HG
Sbjct: 359 -DGRHG 363
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 20/131 (15%)
Query: 230 RLIKELEGVKVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
R+ + + +I AGF + + + G V+ FG K F E ++ SK
Sbjct: 20 RVAPAIFPKQAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSK 67
Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ ++ CG HT ++T +LY +GSN G LG+GS + P ++
Sbjct: 68 FWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA-LKPEK 126
Query: 343 VDQVSCGWKHT 353
V +CG HT
Sbjct: 127 VKLAACGRNHT 137
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 152/335 (45%), Gaps = 31/335 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG GS E P + + ++ +ACG HT +T G +Y G ++
Sbjct: 101 WGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P RI+G + V +S G H++ IT G+L+ +G + G LG G
Sbjct: 161 GLLGHGKDVSHWI-PKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V G+ V
Sbjct: 278 RLGHGDKEPRL---------KPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGN-TV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
L + + P L+ ++ +V CG YH VLT E++TWG NG LG G I
Sbjct: 328 YGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDI 387
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+ P V+ + V ++CG TAAI + K
Sbjct: 388 EDRKIPTLVEA-LRDRSVRHIACGANFTAAICQHK 421
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 114/257 (44%), Gaps = 42/257 (16%)
Query: 142 GELYMWGK----NS--NGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ NS G + + + + P +E + G + S VT
Sbjct: 35 GDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTK 94
Query: 195 GGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG +E SI PRLI+ L V I A G H+ +
Sbjct: 95 NGEVFTWGEESGGRLGHGSREDSI----------HPRLIESLAVCNVDIVACGEFHTCAV 144
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTS 305
G +Y +GD + L G P I+ + Y V CG +HT ++T+
Sbjct: 145 TTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAY---VSCGTWHTALITT 201
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------- 358
G+L+T+G G LG G+ + + P+ V+ S V+CG HTAAI E
Sbjct: 202 MGQLFTFGDGTFGVLGHGNRESISCPKEVES-LSGLKTISVACGVWHTAAIVEVIVTQSS 260
Query: 359 -----GKILTWGWGGSH 370
GK+ TWG G H
Sbjct: 261 SSISSGKLFTWGDGDKH 277
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L + + G HS+ +T +GE++ WG+ S G+LG G + + P +E
Sbjct: 69 KPLE-SNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTP-R 230
L+ A G + AVT G++ +WG G G LGHG++ S + P R
Sbjct: 126 LAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKD---------VSHWIPKR 176
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+A I G+++ FGD + P + L
Sbjct: 177 IAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGL 236
Query: 289 YSEEVVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + G+L+TWG + LG G + P V
Sbjct: 237 KTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCV-AS 295
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ +++CG T + + GK+L+ G
Sbjct: 296 LIDYDFHRIACGHSLTVGLTTSGKVLSMG 324
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 157/334 (47%), Gaps = 18/334 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT G VYA G ND
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ V +QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P+ + L V CG + LT+ G ++T G+ G LG G P R+
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298
Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ +G G S
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLGSS 332
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D+ +LG L ++ RP++ + + + ++CG H+L L++ G V + G ND GQL
Sbjct: 65 GSNDHSQLG-HDLPTK-RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K
Sbjct: 123 GHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
++ +L S +V CG HT L S G +Y +G +G LG S L P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + + G HS + + G+V +
Sbjct: 66 SNDHSQLGHDLPTK-----------RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L+SK ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIMQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
G LG+ S D+ H P R+ P+ ++CG H+ IS+ G + WG
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAVFGWG 223
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
+ SG ELY WGS +G LG+G I+ Q P++ ++ V+QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60
Query: 361 ILTWGWGGSHGTFSED 376
+ G H D
Sbjct: 61 VYACG-SNDHSQLGHD 75
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 163/335 (48%), Gaps = 25/335 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LGLGS E+ S+ ++A G HT++LT T VY+ G N+FGQ
Sbjct: 4 WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ P ++G +E+ ++ G S AI G L+ WG++ NG+L + +
Sbjct: 63 LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ K+ S + Q A G + +A+T G +LSWG+ G+LG G SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HA 278
P +I L + AG HS + +G ++ +G ++ GN
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQL--GHGNSDSFQ 226
Query: 279 RRPSLISKLPYSEEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P L+ L + E V G H+ T G +++WG NG LG S+ + P+++
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIM- 285
Query: 337 PFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSH 370
+ V Q+ CG +HT ++++ K+L +G ++
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNN 320
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 125/278 (44%), Gaps = 17/278 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G L + +S P + S+ +ACG H + LTE G + + G N GQ
Sbjct: 105 WGRSLNGEL-MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQ 163
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + LEP I+ L + QI G +HS ++ G L+ WGKN+ GQLG G
Sbjct: 164 LGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V+ L A+G E SV T G V SWG GG+G+LGH +++
Sbjct: 224 S-FQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVT--- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P+ I EL G V G H+ + + ++ FG + +++ AR P
Sbjct: 280 ------QPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLP 333
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
I P S + +C+ G + ++ NE+ C
Sbjct: 334 ITI---PIS--LTDDRQLSCIAAGGDQSFSGSQNESSC 366
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 21/230 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WGKN GQLGLG + +I P+ ++ + + A G +V +T KV S G+
Sbjct: 1 MYGWGKNDYGQLGLGSENM-LISCPSPIDANQSVIS--IASGLRHTVYLTSTRKVYSCGS 57
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + S+ P L+ ++ AAG S I E+G ++ +G
Sbjct: 58 NEFGQLG-----------QQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG 106
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R+++ L + + P L+ K+ + +V CG H LT G + +WGSN G LG
Sbjct: 107 -RSLNGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLG 165
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG---WG 367
+GS ++ + + P+ Q+ G H+ +S G + TWG WG
Sbjct: 166 LGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWG 215
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
Query: 92 VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G ND+GQLG+ SEN+ S P I + V+ I++G H+ +T ++Y G N
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG K + P+ V A G S+A+ G + WG +G L
Sbjct: 59 EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
Q+S + P+L+ ++ V A G H + E G + +G ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164
Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L P++I+ L P S+ + G YH+ VL+ G L+TWG N G LG G+ D
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGS 369
S R+ V V+ G +H+ G + +WG GG+
Sbjct: 224 SFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGN 267
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 39/297 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+ G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDG 203
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DGELYMWG NS GQ+GL +
Sbjct: 204 QLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASE 263
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P + G + G+ S VT G++ ++G +G+LG E
Sbjct: 264 SNVCVP----CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSE------ 313
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------DRA 266
+ + P+L+ + G KV A G H+ + E VY FG + +
Sbjct: 314 -QLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEED-VYTFGLGEFGQLGLGTCIFETS 370
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V K++ H R+ K+ Y V CG HT +++ G +YT+G +G LG+G
Sbjct: 371 VPKVV----EHLRK----QKIHY---VACGENHTALISDTGLMYTFGDGRHGKLGLG 416
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 150/311 (48%), Gaps = 32/311 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST- 130
+L L+CG HT F+T +Y G N++GQLG+ + +P + LK E V+ +
Sbjct: 122 TLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKFAAC 180
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALG 185
G +H+ T G +Y G NS+GQLGLG + T +S FT KQ + G
Sbjct: 181 GRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEER-----TTFHQIS-FFTSRYKIKQLSAG 234
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S A+T G++ WG G++G ES++ R + G V +
Sbjct: 235 SNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV-----------VIGKPVSWVSC 283
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTC 301
G+ HSA + +G +Y FG+ K+ Q NH R P L+ + +V CGG HT
Sbjct: 284 GYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNH-RIPQLVPGISGKVNQVACGGGHTV 342
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
LT ++YT+G E G LG+G+ S +V + + V+CG HTA IS+ G
Sbjct: 343 ALTEE-DVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGL 401
Query: 361 ILTWGWGGSHG 371
+ T+G G HG
Sbjct: 402 MYTFG-DGRHG 411
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G++GL S + P C + ++CG H+ +T G +Y G + G
Sbjct: 249 MWGDNSEGQIGLASESNVCVP--CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENG 306
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+ SE + P + G+ +V Q++ G H+ A+T + ++Y +G GQLGLG
Sbjct: 307 KLGLSSEQLKNHRIPQLVPGISGKVNQVACGGGHTVALT-EEDVYTFGLGEFGQLGLGTC 365
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P VE L A G + ++ G + ++G G G+LG G+E+
Sbjct: 366 IFET-SVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEEN----- 419
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
T+++ P L V + A G H
Sbjct: 420 --FTNQFIPTLCSNFLRFSVHLVACGGCH 446
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + S+ +ACGG H L
Sbjct: 405 FGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVF 450
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 153/338 (45%), Gaps = 33/338 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G YG LGLG ++ R P F++ ++ +A G H LT G V G N G
Sbjct: 43 VFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSG 102
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG N S P +I LK + IS+ G + + I+ DG+LY G N+ GQLG G
Sbjct: 103 QLGHGNNKSIST-PKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHG 161
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK--------VLSWGAGGSGRLG 210
++ + PT V+ L + + S+ VT + V S G +G+L
Sbjct: 162 TQSN--LSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQL- 218
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
GQE + E TP++I+ L +V A G HS + +G V+ G ++
Sbjct: 219 -GQE-------HTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQL 270
Query: 271 LFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DV 327
+ +P LI L + + CG YHT V GE+Y +G N+ G LGI +
Sbjct: 271 GHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQA 330
Query: 328 LHSPERVQGPFSESPV-------DQVSCGWKHTAAISE 358
L P+++Q + S + +Q+ G +H S+
Sbjct: 331 LIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQ 368
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET--------GCVYAT 95
G +YG+LG G+ + P + A + + ++C H+L +T+ VY+
Sbjct: 151 GYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSV 210
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G ND GQLG E+ + + P I L ++V+Q + G HHS +TV GE++ G N NGQ
Sbjct: 211 GRNDNGQLG-QEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQ 269
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG ++ P+ +E L F QAA G+ ++ G++ ++G G+LG
Sbjct: 270 LGHNDTKSRNQPVL--IESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETN 327
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG----FLHSACIDENGRVYIFGDR-AVDK 269
L P+ I+E V I +G LHS G+ A+ +
Sbjct: 328 GQAL--------IQPKQIQEFLTVS-NIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQ 378
Query: 270 MLFQEGN-HARRPSL--ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L + N + ++P + +SK ++ CG YH+ L G+L+T+G +G LG G+ +
Sbjct: 379 GLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTE 438
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
P++V + V ++ G+ HT + + K
Sbjct: 439 DQKLPKQV-ASLHDKKVIGIAGGFYHTIVLVKQK 471
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 25/239 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++++G+NS G+LGLG + IP++V + Q A G E +T G VL+ G
Sbjct: 41 VFVFGQNSYGELGLGDVQER--SIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYI 261
GSG+LGHG SI TP+ I+ L+ +++ +A G + A I ++G++Y
Sbjct: 99 NGSGQLGHGNNKSI---------STPKKIESLKNIRITHISSANGCENLAIISQDGKLYT 149
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE--------LYT 311
G ++ ++ P+L+ L ++ V C YH+ ++T +Y+
Sbjct: 150 CGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
G N+NG LG +P+ ++ + V Q +CG H+ ++ G++ + G+ +
Sbjct: 210 VGRNDNGQLGQEHTCHEITPKIIRS-LNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDN 267
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS + DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V +WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP V E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHVMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G VY +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+ V
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMV 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE+Y WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YAWGYNGN------------GQLGLGNNGNQLTP 224
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 366 WGGSHG 371
G HG
Sbjct: 359 -DGRHG 363
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
+ +I AGF + + + G V+ FG K F E ++ SK + ++
Sbjct: 29 QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG HT ++T +LY +GSN G LG+GS + P ++ E V +CG
Sbjct: 77 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK-VKLAACGRN 135
Query: 352 HT 353
HT
Sbjct: 136 HT 137
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 153/340 (45%), Gaps = 30/340 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3119 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3178
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P + L+ K++ I+ G HS+AI+ GELY WG G+LG G
Sbjct: 3179 KLG-HGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3237
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V LSG Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3238 ATQLKP--KLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3290
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3291 ----SEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3346
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I+ L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3347 RKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3406
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
V++V+CG H+ A WG + + E+
Sbjct: 3407 -LDAVIVNRVACGSSHSMA----------WGLPNASLDEE 3435
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4219 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4276
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4277 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4335
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4336 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4389
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4390 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4439
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS++
Sbjct: 4440 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVE 4497
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4498 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVFTWG 4536
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 131/292 (44%), Gaps = 18/292 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L LT G VYA G + G+LG + Y P + L V I+ G
Sbjct: 4305 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEHLNGMSVADIACGSA 4363
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4364 HSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLC 4421
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4422 ITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFSV 4472
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ H RRP ++ L + + G H + GE+
Sbjct: 4473 ALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEV 4532
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+TWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4533 FTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4583
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3232 LGHGDN-ATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3290
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3291 SEGSS--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3346
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3347 -------RKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3397
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L V CG H+
Sbjct: 3398 NKKPALVIGLDAVIVNRVACGSSHS 3422
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 147/302 (48%), Gaps = 23/302 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3101 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3159
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G ++ + P VE L + A G S A++
Sbjct: 3160 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3217
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3218 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALSGRRVIQVACGSRDAQTLA 3268
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3269 LTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3328
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3329 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGHRVIHVAVGALHCLAVTDAGQVYAWG-DND 3386
Query: 370 HG 371
HG
Sbjct: 3387 HG 3388
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4325 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4384
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4385 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4442
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4443 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHV-- 4499
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 4500 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQ 4552
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4553 RPRLVAALQGKHIVKVTCGSAHTLALST 4580
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 132/311 (42%), Gaps = 44/311 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVY----ATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
K L+ +AC L L++ G +Y A + QL +E +
Sbjct: 599 KFQLQQVACSEDVVLLLSKEGKLYNWHIAKPEAEPQQLDFAEIANETF------------ 646
Query: 126 VQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
IS H H A+ + Y WG + +LG G A+ +PTK+E L + K
Sbjct: 647 --ISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVRL-VKS 701
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S A+T GG + +WG G GRLGHG S + P ++ L+ +V
Sbjct: 702 VYCGCSYSAAITLGGNLYTWGRGTYGRLGHGT---------SDDQCLPAMVMALKDHQVV 752
Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
A +G H+ C+ G V+ +GD K+ N + P LI LP + V G
Sbjct: 753 DVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVFAGAQF 812
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSESPVDQVSCGWKHTAA 355
+ L+ G+LY+WG + CLG ++ P + G + VD V+ G H A
Sbjct: 813 SLALSCEGQLYSWG--KASCLGHQLVERNVQGCSVPRLITGLQHKRIVD-VAVGVAHCLA 869
Query: 356 I-SEGKILTWG 365
+ S G+I WG
Sbjct: 870 LSSSGEIFGWG 880
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A C G H L + Y+ G+ D +LG + L P +I L + V + G +
Sbjct: 650 AAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRLVKSVYCGCSY 708
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT+ G LY WG+ + G+LG G + +P V L ALG ++ +
Sbjct: 709 SAAITLGGNLYTWGRGTYGRLGHGTSDDQC--LPAMVMALKDHQVVDVALGSGDAHTLCL 766
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G V +WG G G+LG+G +S L P+LI L V+ A A F S
Sbjct: 767 TSEGLVFAWGDGDYGKLGNGSCNSSL---------LPQLIDCLPRVQRVFAGAQF--SLA 815
Query: 253 IDENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ G++Y +G + +++ + P LI+ L + +V G H L+S GE
Sbjct: 816 LSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGE 875
Query: 309 LYTWGSNENGCLGIGSI---DVLHSPERVQGP 337
++ WG N+N + S+ +L P +V P
Sbjct: 876 IFGWGRNDNQQICPASVCSEPLLRQPIQVTLP 907
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A + H + AL G AHTL LT G V+A G D+
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL P I L + V ++ G S A++ +G+LY WGK S L ++
Sbjct: 781 GKLG-NGSCNSSLLPQLIDCLPR-VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVER 838
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +P + L A+G +A++ G++ WG + ++
Sbjct: 839 NVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT +S + A G + V+ GKV + G
Sbjct: 3063 VMVWGLNDKEQLG-GLKGSKV-KVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3120
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 3121 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3171
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ + +P L+ L + ++ CG H+ ++S GELYTWG E G
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG--GSHGTFS 374
LG G P+ V S V QV+CG + T A++E G + +WG G G G
Sbjct: 3232 LGHGDNATQLKPKLVAA-LSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3290
Query: 375 EDGHSSGGQLDR 386
+G S+ +++R
Sbjct: 3291 SEGSSTPHEIER 3302
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 71/286 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS---------------------------- 175
+Y WG N GQLG G + ++ I PT E LS
Sbjct: 4216 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4273
Query: 176 ------------------------GIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
+F K+ A+ G + +A+T G+V +WG G G+L
Sbjct: 4274 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4333
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4334 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4384
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4385 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4444
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
D P +++ + V +V CG + + A+++ G + TWG G H
Sbjct: 4445 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH 4489
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G +R P + + +K++ CG +++ +T G +Y G +G+
Sbjct: 670 WGVGDSRRLGHGDCHARELPTKIESLVR-LVKSVYCGCSYSAAITLGGNLYTWGRGTYGR 728
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L + ++ +VV ++ +G H+ +T +G ++ WG G+LG G
Sbjct: 729 LGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSC 788
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
+ ++P ++CL + ++ G + S+A++ G++ SWG LGH E ++ G
Sbjct: 789 NSSLLP--QLIDCLPRV--QRVFAGAQFSLALSCEGQLYSWGKASC--LGHQLVERNVQG 842
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRLI L+ ++ A G H + +G ++ +G
Sbjct: 843 C------SVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWG 880
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG G+LG + S I TP + L ++ A G +
Sbjct: 4212 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4262
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+++ G + ++ + P+L+ L + V GG H LT+ GE+
Sbjct: 4263 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEV 4322
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
Y WG E+G LG G+ P+ V+ S D ++CG H+AAI+ G +LTWG G
Sbjct: 4323 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITASGHVLTWGKG 4380
>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Strongylocentrotus purpuratus]
Length = 539
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 174/369 (47%), Gaps = 45/369 (12%)
Query: 39 FAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
FA L WG YG+LGLG + P F + +K + GG HT+FLT G ++ G
Sbjct: 149 FAYLAWGANSYGQLGLGHQKDHLLPENLKTFPE-DVKTIVGGGGHTVFLTGNGDLHVCGS 207
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
N+ GQLG+ + + +R+ L+ + +I+ G++H+ AIT + EL WG N++GQL
Sbjct: 208 NNKGQLGLGHTSDIN-KLVRVPDLRP-LKKIACGWNHTVAITENDELLCWGSNTHGQL-- 263
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
++ P ++E LSG+ + A G ++AV+ G++ +WGAG G+LG
Sbjct: 264 -THKESIVTKPRQIE-LSGVDCPRFAAISGGLRHTLAVSTDGQLWTWGAGKKGQLGWTDS 321
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ + + P +++ VK AAG HSA + + G +YI+G ++ +
Sbjct: 322 KMRVPHQWNKPVHIPVKEDDVD-VKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLAQPK 380
Query: 275 GNHA----RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG------- 321
++ +R P+L L + + G H +T +YTWG N+ G LG
Sbjct: 381 SSNPISTPKRLDPALFDGLTI-KGIHSGWTHMLAITEDESVYTWGRNDYGQLGRPAAKSI 439
Query: 322 --------------IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 366
+ D H P + Q+ CG +H+ AI+ + K+L WGW
Sbjct: 440 PNGSAESESNATPTTTTPDCCHVPTEIS---ILKNAKQIVCGAEHSLAITKDDKLLAWGW 496
Query: 367 GGSHGTFSE 375
HG ++
Sbjct: 497 -NEHGMCAD 504
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 143/305 (46%), Gaps = 43/305 (14%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G +TLF A G N +GQLG+ + L P + ++V I G H+ +T
Sbjct: 144 GVYTLF-----AYLAWGANSYGQLGLGHQKDHLL-PENLKTFPEDVKTIVGGGGHTVFLT 197
Query: 140 VDGELYMWGKNSNGQLGLGKKA--AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+G+L++ G N+ GQLGLG + K++ +P K+ A G+ +VA+T +
Sbjct: 198 GNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP------LKKIACGWNHTVAITENDE 251
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA---GFLHSACID 254
+L WG+ G+L H +ES + PR I EL GV AA G H+ +
Sbjct: 252 LLCWGSNTHGQLTH-KESIV---------TKPRQI-ELSGVDCPRFAAISGGLRHTLAVS 300
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEE--------VVCGGYHTCVL 303
+G+++ +G ++ + + + R P +K +P E+ V G YH+ L
Sbjct: 301 TDGQLWTWGAGKKGQLGWTD-SKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAAL 359
Query: 304 TSGGELYTWGSNENGCLG-IGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISEGK- 360
+ G LY WG N+ L S + + +P+R+ F + + GW H AI+E +
Sbjct: 360 SDMGILYIWGCNKWSQLAQPKSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDES 419
Query: 361 ILTWG 365
+ TWG
Sbjct: 420 VYTWG 424
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 31/308 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+K + GG HT+FLT G ++ G N+ GQLG+ + + +R+ L+ + QI G
Sbjct: 23 DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDIN-KLVRVPDLRP-LKQIVCG 80
Query: 132 YHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPT-------KVECLSGIFTKQAA 183
++H+ AIT DG L + + ++G ++IP+P V G + ++
Sbjct: 81 WNHTVAITGTDGSLELLHRGQFNEVG-----RELIPVPECSWEETLPVAVRVGAGSHESC 135
Query: 184 LGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVK 241
+G + V L+WGA G+LG G + L P +K E VK
Sbjct: 136 VGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHL---------LPENLKTFPEDVKTI 186
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
+ G H+ + NG +++ G ++ + + + L +++ CG HT
Sbjct: 187 VGGGG--HTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKKIACGWNHTV 244
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAIS-EG 359
+T EL WGSN +G L ++ P +++ + P +S G +HT A+S +G
Sbjct: 245 AITENDELLCWGSNTHGQL-THKESIVTKPRQIELSGVDCPRFAAISGGLRHTLAVSTDG 303
Query: 360 KILTWGWG 367
++ TWG G
Sbjct: 304 QLWTWGAG 311
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 37/274 (13%)
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA--AKVIPIPTKVEC 173
LRIS ++V I G H+ +T +G+L++ G N+ GQLGLG + K++ +P
Sbjct: 15 LRISNFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP- 73
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLI 232
KQ G+ +VA+T G GS L H GQ + + L E +
Sbjct: 74 -----LKQIVCGWNHTVAIT--------GTDGSLELLHRGQFNEVGRELIPVPECS---W 117
Query: 233 KELEGVKVKIAAAGFLHSACIDE----NGRVYIF-----GDRAVDKM-LFQEGNHARRPS 282
+E V V++ A H +C+ NG +F G + ++ L + +H +
Sbjct: 118 EETLPVAVRVGAGS--HESCVGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHLLPEN 175
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
L + + +V GG HT LT G+L+ GSN G LG+G ++ RV P
Sbjct: 176 LKTFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVP---DLRP 232
Query: 343 VDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSE 375
+ +++CGW HT AI+E ++L WG +HG +
Sbjct: 233 LKKIACGWNHTVAITENDELLCWG-SNTHGQLTH 265
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 49/229 (21%)
Query: 43 WGNGDYGRLGLGSLESR----W-RPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYA 94
WG G G+LG + R W +PV E +A G H+ L++ G +Y
Sbjct: 308 WGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDMGILYI 367
Query: 95 TGLNDFGQLGISEN-----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G N + QL ++ L+P GL + I +G+ H AIT D +Y WG+
Sbjct: 368 WGCNKWSQLAQPKSSNPISTPKRLDPALFDGLT--IKGIHSGWTHMLAITEDESVYTWGR 425
Query: 150 NSNGQLGLGKKAAKVIP---------------------IPTKVECLSGIFTKQAALGFEQ 188
N GQ LG+ AAK IP +PT++ L KQ G E
Sbjct: 426 NDYGQ--LGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISILKN--AKQIVCGAEH 481
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
S+A+T K+L+WG G G ++++ + P+ ++ L+G
Sbjct: 482 SLAITKDDKLLAWGWNEHGMCADGTKTNV---------FLPKQVQGLDG 521
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 366 WGGSHG 371
G HG
Sbjct: 359 -DGRHG 363
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 20/122 (16%)
Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
+ +I AGF + + + G V+ FG K F E ++ SK + ++
Sbjct: 29 QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG HT ++T +LY +GSN G LG+GS + P ++ V +CG
Sbjct: 77 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRN 135
Query: 352 HT 353
HT
Sbjct: 136 HT 137
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
+A G H+ + E VY FG + LF+ P +I ++ + +
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT ++T G +YT+G +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 145/315 (46%), Gaps = 32/315 (10%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F+ L+CG HT +T +Y G N++GQLG+ S +P I LK E V+
Sbjct: 70 FKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVK 128
Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
++ G +H+ T G +Y G N+ GQLGLG + G FT KQ
Sbjct: 129 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQ 182
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G S A+T GK+ WG G++G +S++ P + G +
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEVTV--GKPIS 231
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGG 297
+ G+ HSA + +G +Y FG+ K+ NH R P + +P +V CGG
Sbjct: 232 WISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGG 290
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
HT VLT +Y +G + G LG+G+ S ++ + + +SCG HTA ++
Sbjct: 291 GHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMT 349
Query: 358 E-GKILTWGWGGSHG 371
+ G + T+G G HG
Sbjct: 350 DIGLMYTFG-DGRHG 363
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 38/324 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G YGRLG G+ S P++ F K L G+ H++ + + G ++ G D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYG 244
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG ++ L + + +V G+ HS+A+ G LYMWG+ G+LGLG
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ +P+ P E Q GF +V ++ G+ V S+GA +G+LGHG
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI------FGDRAVDKMLF 272
+ ++ P++I L+G+ + AAG SA + G +Y+ G+ + D+
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLH 329
P ++ L ++ G H LT G ++TWG+N+NG G GS +
Sbjct: 410 -------LPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYT 462
Query: 330 SPERVQGPFSESPVDQVSCGWKHT 353
SP+ VQG + + QV+ G HT
Sbjct: 463 SPQMVQG-LHGAGIQQVTAGTTHT 485
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 141/288 (48%), Gaps = 16/288 (5%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ G N QL + L P +S K V+ I+ G + + A+ +G + GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSITAGQYCTFAVLSNGTVMANGKGS 189
Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G A+ PI + + I T + + G S+A+ G++ +WG G G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSMAIGKNGQIWTWGDGDYGKLG 247
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG ST++ +P+LI+ L + A G HSA + + G +Y++G+ ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLH 329
+ P + + + +VVCG HT VL T G ++++G+ ENG LG G +
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQF 358
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
P+ + + Q++ G + +AA++ EG + WG+G G S D
Sbjct: 359 RPKIIDA-LQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSD 405
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G ++ P + A + CG H+ + + G +Y G D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
LG+ + + S+ P+++ + +E Q+ G++H+ ++ DG ++ +G NG+LG G
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ L G+ Q A G + S AVT G + WG G G E+ +L
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
P++++ L G V A G H + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNN 447
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
+WG GDYGRLGLG R PV + S + CG HT+ L+ G V++ G +
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + P I L+ + QI+ G S+A+T +G LY+WG LG G
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P V LSG A+G VA+T G V +WG +G+ G G G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
TS P++++ L G ++ AG H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 111/253 (43%), Gaps = 26/253 (10%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG NS+ QL K++ P + + + A G + AV G V++ G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLL-YPRNLSVYGKVMSITA--GQYCTFAVLSNGTVMANG 186
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL-HSACIDENGRVYI 261
G GRLG+G S S +P LI+ V+ + + G HS I +NG+++
Sbjct: 187 KGSYGRLGNG---------ASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWT 237
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
+GD K+ + + P LI L S +V CG H+ + G LY WG + G
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALA-SRVIVDADCGHRHSAAVCDAGHLYMWGEGDYG 296
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
LG+G D L VQ P QV CG+ HT +S W +G +E+G
Sbjct: 297 RLGLG--DALQRSVPVQVP-DIREASQVVCGFNHTVVLSTDGRTVWSFGA-----AENGK 348
Query: 379 SSGGQLDRGQLTP 391
G +R Q P
Sbjct: 349 LGHGDTNR-QFRP 360
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 166/370 (44%), Gaps = 56/370 (15%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ G+LG G++ +R PV+ S+ + AL+ GG H+L L G A G N
Sbjct: 316 ARAWGSNVSGQLGDGTVSNRTSPVLVSSLT--GVTALSAGGNHSLALLADGTARAWGANV 373
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG +L P+ + GL V ++ G +HS A+ +G + WG N+ GQLG G
Sbjct: 374 SGQLGDGTTTQRTL-PVGLPGLTG-VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGS 431
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG------- 212
A + P+ V L+G+ + A G++ S+A+ G V +WG SG+LG G
Sbjct: 432 TAQRTAPV--VVPALTGVVSLTA--GYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGT 487
Query: 213 --QESSI---------------------------------LGFLRSTSEYTPRLIKELEG 237
Q S + LG +++ +TP + L
Sbjct: 488 PVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTN 547
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
V V IAA G +S + NG V +G + ++ P + + + G
Sbjct: 548 V-VAIAAGGD-YSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVTNVVAIAAGA 605
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
H L + G +Y WG N+ G LG G+ ++P +V G + V ++ GW H+ A+
Sbjct: 606 NHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPG---LTNVVAIATGWDHSLALR 662
Query: 357 SEGKILTWGW 366
++G + WG+
Sbjct: 663 ADGTVYAWGY 672
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 145/324 (44%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P A++ GG ++L L G V A G N +GQ
Sbjct: 69 WGDNASGQLGDGTTTQRSSPTAVPGLA--GAVAVSAGGEYSLALLGDGTVRAWGNNTYGQ 126
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P + GL VV I+ G +H+ A+ DG + WG N+ GQLG G
Sbjct: 127 LG-DGTTPHRASPGAVPGLSG-VVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQ 184
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+G+ A G S+AV G V +WG GRLG G
Sbjct: 185 RRTPV--AVLGLTGVVAIAA--GENHSLAVLADGTVRAWGNNTYGRLGDGT--------- 231
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +P L+ L GV AAG HS + +G V +G A ++ P
Sbjct: 232 TTQRTSPVLVSSLTGVTAI--AAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPV 289
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L E+ GG H+ L + G WGSN +G LG G++ SP V S +
Sbjct: 290 AVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVS---SLTG 346
Query: 343 VDQVSCGWKHT-AAISEGKILTWG 365
V +S G H+ A +++G WG
Sbjct: 347 VTALSAGGNHSLALLADGTARAWG 370
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 152/329 (46%), Gaps = 28/329 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G+ R PV + ++ GG H+L L G A G N GQ
Sbjct: 269 WGYNASGRLGDGTTTQRATPVAVPGLT--GVTEISAGGGHSLALLADGTARAWGSNVSGQ 326
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ +S L V +S G +HS A+ DG WG N +GQLG G
Sbjct: 327 LG-DGTVSNRTSPVLVSSLTG-VTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQ 384
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + L+G+ A G S+AV G V +WG G+LG G
Sbjct: 385 RTLPV--GLPGLTGVAALAA--GGYHSLAVLANGTVRAWGHNTYGQLGDG---------- 430
Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
ST++ T P ++ L GV V + AG+ HS + +G V +G+ A ++ N P
Sbjct: 431 STAQRTAPVVVPALTGV-VSL-TAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTP 488
Query: 282 SLISKLPYSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
+S L + + GG YH L S G + WG N NG LG GS +P V G
Sbjct: 489 VQVSGL-TNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSG--- 544
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+ V ++ G ++ A+ S G + +WG+G
Sbjct: 545 LTNVVAIAAGGDYSLALQSNGTVQSWGYG 573
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA G AH+L T G V A G N GQLG S P + GL V +S G +S
Sbjct: 50 LASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRS-SPTAVPGLAGAVA-VSAGGEYS 107
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG + WG N+ GQLG G + P V LSG+ A G ++A+
Sbjct: 108 LALLGDGTVRAWGNNTYGQLGDGTTPHRA--SPGAVPGLSGVVAIAA--GNNHALALLSD 163
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G +T TP + L GV V I AAG HS +
Sbjct: 164 GTVRAWGYNAYGQLGDGT---------TTQRRTPVAVLGLTGV-VAI-AAGENHSLAVLA 212
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V +G+ ++ P L+S L + G H+ + + G + WG N
Sbjct: 213 DGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYN 272
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 365
+G LG G+ +P V G + V ++S G H+ A +++G WG
Sbjct: 273 ASGRLGDGTTTQRATPVAVPG---LTGVTEISAGGGHSLALLADGTARAWG 320
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 141/338 (41%), Gaps = 55/338 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS R PVV A + +L G H+L L G V A G N GQ
Sbjct: 419 WGHNTYGQLGDGSTAQRTAPVVVPALT--GVVSLTAGYDHSLALLSDGTVRAWGNNASGQ 476
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG-YHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG P+++SGL VV +S G +H+ A+ DG + WG N NGQLG G +
Sbjct: 477 LG-DGTTNQRGTPVQVSGLTN-VVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTS 534
Query: 162 AKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES----- 215
+ P+ +SG+ A A G + S+A+ G V SWG G G LG ++
Sbjct: 535 NRWTPV-----AVSGLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTP 589
Query: 216 ------------------------------------SILGFLRSTSEYTPRLIKELEGVK 239
LG + TP + L V
Sbjct: 590 KAVPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNV- 648
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY 298
V IA G+ HS + +G VY +G ++ N+ + P+ + L V GG
Sbjct: 649 VAIAT-GWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVAVTAGGN 707
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ L S G ++ WG N +G LG GS +P V G
Sbjct: 708 QSLALLSSGAVHAWGDNSHGELGNGSTLTPPAPVAVTG 745
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
PLR SG V++++G HS T DG + WG N++GQLG G + PT V
Sbjct: 38 RPLR-SG-SPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQR--SSPTAVPG 93
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+G A G E S+A+ G G V +WG G+LG G + +P +
Sbjct: 94 LAGAVAVSA--GGEYSLALLGDGTVRAWGNNTYGQLGDGT---------TPHRASPGAVP 142
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
L GV V I AAG H+ + +G V +G A ++ R P + L +
Sbjct: 143 GLSGV-VAI-AAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAI 200
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
G H+ + + G + WG+N G LG G+ SP V S + V ++ G H+
Sbjct: 201 AAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVS---SLTGVTAIAAGANHS 257
Query: 354 -AAISEGKILTWGWGGS 369
A +++G + WG+ S
Sbjct: 258 LAVLADGTVRAWGYNAS 274
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 366 WGGSHG 371
G HG
Sbjct: 359 -DGRHG 363
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 230 RLIKELEGVKVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
R+ + + +I AGF + + + G V+ FG K F E ++ SK
Sbjct: 20 RVAPAIFPKQAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSK 67
Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ ++ CG HT ++T +LY +GSN G LG+GS + P ++ E
Sbjct: 68 FWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK- 126
Query: 343 VDQVSCGWKHT 353
V +CG HT
Sbjct: 127 VKLAACGRNHT 137
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN +G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 38/324 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G YGRLG G+ S P++ F K L G+ H++ + + G ++ G D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYG 244
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG ++ L + + +V G+ HS+A+ G LYMWG+ G+LGLG
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ +P+ P E Q GF +V ++ G+ V S+GA +G+LGHG
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI------FGDRAVDKMLF 272
+ ++ P++I L+G+ + AAG SA + G +Y+ G+ + D+
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLH 329
P ++ L ++ G H LT G ++TWG+N+NG G GS +
Sbjct: 410 -------LPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYT 462
Query: 330 SPERVQGPFSESPVDQVSCGWKHT 353
SP+ VQG + + QV+ G HT
Sbjct: 463 SPQMVQG-LHGAGIQQVTAGTTHT 485
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 141/288 (48%), Gaps = 16/288 (5%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ G N QL + L P +S K V+ ++ G + + A+ +G + GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSMTAGQYCTFAVLSNGTVMANGKGS 189
Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G A+ PI + + I T + + G S+A+ G++ +WG G G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSIAIGKNGQIWTWGDGDYGKLG 247
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG ST++ +P+LI+ L + A G HSA + + G +Y++G+ ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLH 329
+ P + + + +VVCG HT VL T G ++++G+ ENG LG G +
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQF 358
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
P+ + + Q++ G + +AA++ EG + WG+G G S D
Sbjct: 359 RPKIIDA-LQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSD 405
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G ++ P + A + CG H+ + + G +Y G D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
LG+ + + S+ P+++ + +E Q+ G++H+ ++ DG ++ +G NG+LG G
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ L G+ Q A G + S AVT G + WG G G E+ +L
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
P++++ L G V A G H + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNN 447
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
+WG GDYGRLGLG R PV + S + CG HT+ L+ G V++ G +
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + P I L+ + QI+ G S+A+T +G LY+WG LG G
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P V LSG A+G VA+T G V +WG +G+ G G G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
TS P++++ L G ++ AG H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 172/346 (49%), Gaps = 31/346 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K+DI + G I++ + F ++G+ ++G+LGLGS + +P A +
Sbjct: 73 SKFWFKRDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 130
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K +ACG HTL LT G VYATG N+ GQLG+ E + L S K +
Sbjct: 131 PEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 188
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAAL 184
Q+S G + S+A+T +GELY +G+ +G+LGL K +P + + GI K Q A
Sbjct: 189 QLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVP---QLVPGISEKVIQVAC 245
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +V +T V ++G G G+LG G F TSE P++I+ ++ K+
Sbjct: 246 GGGHTVVLTEKA-VYTFGLGQFGQLGLGT------FTFETSE--PKVIESVKDKKISHVC 296
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHT 300
G H+A I E+G +Y FGD K+ N + P+L S L Y +V CGG H
Sbjct: 297 CGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGGCHM 356
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
V + G E+ + I+ + P + P S+ P++ V
Sbjct: 357 LVFATP----RLGMAED--IESDEINYSYLPSAIYVPISDPPLENV 396
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 146/314 (46%), Gaps = 40/314 (12%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E+ + + G + ++G V+ FG+ +EN+ P + + + +
Sbjct: 36 EEQAFHSAITMGEPDKMVPDSGAVFT-----FGKTKFAENM-----PSKFWFKRDIPISL 85
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H++ T + +L+M+G N+ GQLGLG KA + PT ++ L K A G
Sbjct: 86 SCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNH 143
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIA 243
++ +TGGG+V + G G+LG G ++ F TS++ K+K
Sbjct: 144 TLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFF--TSQH-----------KIKQL 190
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSEEVV---CGG 297
+AG SA + G +Y FG+ K+ NH + P L+ + SE+V+ CGG
Sbjct: 191 SAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNH-KVPQLVPGI--SEKVIQVACGG 247
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
HT VLT +YT+G + G LG+G+ S +V + + V CG HTA I+
Sbjct: 248 GHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 306
Query: 358 EGKILTWGWGGSHG 371
E +L G HG
Sbjct: 307 ESGLLYTFGDGRHG 320
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 163/335 (48%), Gaps = 25/335 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LGLGS E+ S+ ++A G HT++LT T VY+ G N+FGQ
Sbjct: 4 WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ P ++G +E+ ++ G S AI G L+ WG++ NG+L + +
Sbjct: 63 LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ K+ S + Q A G + +A+T G +LSWG+ G+LG G SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HA 278
P +I L + AG HS + +G ++ +G ++ GN
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQL--GHGNSDSFQ 226
Query: 279 RRPSLISKLPYSEEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P L+ L + E V G H+ T G +++WG NG LG S+ + P+++
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIME 286
Query: 337 PFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSH 370
+ V Q+ CG +HT ++++ K+L +G ++
Sbjct: 287 LMGTT-VCQICCGRRHTISLTDKRKLLGFGLNSNN 320
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 125/278 (44%), Gaps = 17/278 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G L + +S P + S+ +ACG H + LTE G + + G N GQ
Sbjct: 105 WGRSLNGEL-MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQ 163
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + LEP I+ L + QI G +HS ++ G L+ WGKN+ GQLG G
Sbjct: 164 LGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V+ L A+G E SV T G V SWG GG+G+LGH +++
Sbjct: 224 S-FQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVT--- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P+ I EL G V G H+ + + ++ FG + +++ AR P
Sbjct: 280 ------QPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHNDTSARLP 333
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
I P S + +C+ G + ++ NE+ C
Sbjct: 334 ITI---PIS--LTDDRQLSCIAAGGDQSFSGSQNESSC 366
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 21/230 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WGKN GQLGLG + +I P+ ++ + + A G +V +T KV S G+
Sbjct: 1 MYGWGKNDYGQLGLGSENM-LISCPSPIDANQSVIS--IASGLRHTVYLTSTRKVYSCGS 57
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + S+ P L+ ++ AAG S I E+G ++ +G
Sbjct: 58 NEFGQLGQQK-----------SQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWG 106
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R+++ L + + P L+ K+ + +V CG H LT G + +WGSN G LG
Sbjct: 107 -RSLNGELMCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLG 165
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG---WG 367
+GS ++ + + P+ Q+ G H+ +S G + TWG WG
Sbjct: 166 LGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWG 215
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 23/284 (8%)
Query: 92 VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G ND+GQLG+ SEN+ S P I + V+ I++G H+ +T ++Y G N
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG K + P+ V A G S+A+ G + WG +G L
Sbjct: 59 EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
Q+S + P+L+ ++ V A G H + E G + +G ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164
Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L P++I+ L P S+ + G YH+ VL+ G L+TWG N G LG G+ D
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGS 369
S R+ V V+ G +H+ G + +WG GG+
Sbjct: 224 SFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGN 267
>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
Length = 394
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 154/347 (44%), Gaps = 23/347 (6%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVY 93
QR FA WG YG+LGLG+ + P + + F H +K+++ GG H+ +T+ G VY
Sbjct: 9 QRLFA--WGANSYGQLGLGTTQDSLLPQLVTGFPNHETVIKSISAGGGHSAAVTDAGHVY 66
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G N GQLG++ + L L V +++ G+ + +T GEL G N+
Sbjct: 67 VCGQNSEGQLGLNHTTDVTHFSLCPGTLTLRVSKVACGWDFTLILTDSGELLSCGANTYS 126
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + IP P ++ + A G +A+T G++ WG+G +
Sbjct: 127 QLGRAGEERSCIPRPLDIQKRKVL---DVAAGLRHVLALTDNGQIFQWGSGLASHARRFS 183
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + + S++E P + + G+ K+ AAG H + + G VY++G ++L
Sbjct: 184 QQKPIPAVYSSTE--PCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSNKHGQLLHS 241
Query: 274 EGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID---- 326
+ + + L E VV G H T G+++TWG LG
Sbjct: 242 DPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTDTGKVFTWGRANYSQLGRPPNSEGTG 301
Query: 327 ----VLHSPERVQGPF---SESPVDQVSCGWKHTAAISEGKILTWGW 366
VL Q P S + QV+CG +H A+ G + +WGW
Sbjct: 302 LHETVLQGISANQLPAWIPSLTGSSQVACGSEHNLAVCGGLLYSWGW 348
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG--VKVKIAAAGFLHSACID 254
++ +WGA G+LG G L P+L+ +K +AG HSA +
Sbjct: 10 RLFAWGANSYGQLGLGTTQDSL---------LPQLVTGFPNHETVIKSISAGGGHSAAVT 60
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGEL 309
+ G VY+ G + ++ NH + S P + +V CG T +LT GEL
Sbjct: 61 DAGHVYVCGQNSEGQLGL---NHTTDVTHFSLCPGTLTLRVSKVACGWDFTLILTDSGEL 117
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ G+N LG + P + + V V+ G +H A+++ G+I WG G
Sbjct: 118 LSCGANTYSQLGRAGEERSCIPRPLD--IQKRKVLDVAAGLRHVLALTDNGQIFQWGSG 174
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P A + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++++ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P I+ L
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + V+ +C
Sbjct: 259 IQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE-KDRIVEIAACH 317
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G V+ +G A ++ N
Sbjct: 80 LGDVQSTIE--PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137
Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS ++ EV CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 138 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197
Query: 334 VQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGS 369
V G V ++CG + A ++ G++ WG+ G+
Sbjct: 198 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 234
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +V+I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
CCMP2712]
Length = 312
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLK-K 123
S H + +A GG HTLFLT+ G V A G ND QLG E EP ++S L+ K
Sbjct: 1 SLLAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWK 60
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
VV+++ G H+ +DG +Y WG S+G+LGLG K +P P KV L A
Sbjct: 61 RVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGN--FKSVPQPCKVSGLGEERCVSVA 118
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKI 242
G+ S AV GGK+ +WG G G+LG G+ S P ++E G + +
Sbjct: 119 AGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCC---------EPVQVEEPGNGQRWRA 169
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHT 300
G HS + + G ++ +G ++ + RP IS+L ++ CG
Sbjct: 170 VRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFN 229
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAIS-E 358
+++G ++++WG+N G LG G D + E S P V VSCG +H + +
Sbjct: 230 VAISNGSQVFSWGNNRYGQLGHG--DKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRK 287
Query: 359 GKILTWG 365
G+I WG
Sbjct: 288 GRIWAWG 294
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 126/269 (46%), Gaps = 24/269 (8%)
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
RW+ VV +ACG AH L G VY+ GL G+LG+ N +P ++
Sbjct: 58 RWKRVV----------EMACGDAHNLVRCLDGSVYSWGLGSSGRLGLG-NFKSVPQPCKV 106
Query: 119 SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
SGL +E V ++ GY+HS A+ G+L+ WG + GQLG GK + P+ + E +G
Sbjct: 107 SGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVE-EPGNGQ 165
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G S+ +T G + SWG G+LGHG E P+ I EL G
Sbjct: 166 RWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERC---------GRPKGISELVG 216
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVC 295
K+ + G + I +V+ +G+ ++ + +L S P V C
Sbjct: 217 TKISCFSCGPNFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSC 276
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGS 324
GG H L G ++ WG NE+GCLGIG
Sbjct: 277 GGRHVLGLDRKGRIWAWGCNESGCLGIGD 305
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLG+ +S +P S + ++A G H+ + E G ++A G GQ
Sbjct: 84 WGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQ 143
Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + EP+++ G + + G +HS +T G L+ WG N++GQLG G +
Sbjct: 144 LGTGK-FESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDE 202
Query: 161 AAKVIP------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
P + TK+ C S G +VA++ G +V SWG G+LGHG +
Sbjct: 203 ERCGRPKGISELVGTKISCFS--------CGPNFNVAISNGSQVFSWGNNRYGQLGHGDK 254
Query: 215 -SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
I LRS S G V + G H +D GR++ +G
Sbjct: 255 VEQIEETLRSGS----------HGPLVLSVSCGGRHVLGLDRKGRIWAWG 294
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G E RP S + +CG + ++ V++ G N +GQ
Sbjct: 189 WGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNNRYGQ 248
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + E LR V+ +S G H + G ++ WG N +G LG+G
Sbjct: 249 LGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRIWAWGCNESGCLGIGDNIP 308
Query: 163 KVIP 166
++ P
Sbjct: 309 RLAP 312
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYS 290
L G V AAG H+ + + GRV G D +G R P +S L +
Sbjct: 3 LAGHHVVQVAAGGDHTLFLTDAGRVLACGRN--DCYQLGDGYEGREAGPEPQQVSTLRWK 60
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
E+ CG H V G +Y+WG +G LG+G+ + P +V G E V V+
Sbjct: 61 RVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCV-SVAA 119
Query: 349 GWKHTAAISE-GKILTWGWG 367
G+ H+ A+ E GK+ WG G
Sbjct: 120 GYYHSFAVMEGGKLFAWGNG 139
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + A ++ +ACG H+ +T G +Y G+++
Sbjct: 302 WGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNA 361
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P RI+G + ++ ++ G H++ IT G+L+ +G + G LG G
Sbjct: 362 GLLGHGSNVSHWI-PKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHG 420
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + + P +VE L G+ T A G + AV GK+ +WG G
Sbjct: 421 DR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKN 478
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +GRV+ G V
Sbjct: 479 RLGHGDKEARL---------KPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGS-TV 528
Query: 268 DKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + + P L+ K+ EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 529 YGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 588
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ +P V+ + V ++CG ++AAI
Sbjct: 589 IEDRKTPALVEA-LKDRHVKYIACGSNYSAAI 619
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 149/315 (47%), Gaps = 37/315 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
+ACG H +T G V+ G G+L G+ +N+ ++P + L + ++ G
Sbjct: 283 IACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNV---VQPRLVEALISTTIDFVACGE 339
Query: 133 HHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQ 188
HS A+T+ GELY WG ++ G LG G + IP I +E L F A G
Sbjct: 340 FHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFV---ACGPWH 396
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ +T G++ ++G G G LGHG ++ PR ++ L G++ A G
Sbjct: 397 TALITSTGQLFTFGDGTFGVLGHGDRQNV---------SYPREVESLLGLRTIAVACGVW 447
Query: 249 HSACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
H+A + E +G+++ +GD +++ + +P+ +S L Y+ ++ C
Sbjct: 448 HTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIAC 507
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G T LT+ G ++T GS G LG S+ P V + +++++CG H A
Sbjct: 508 GHSLTVGLTTSGRVFTMGSTVYGQLG-SSLSDGKVPCLVGDKIAGESIEEIACGAYHVAV 566
Query: 356 I-SEGKILTWGWGGS 369
+ S+ ++ TWG G +
Sbjct: 567 LTSKNEVYTWGKGAN 581
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 36/288 (12%)
Query: 102 QLGISENIGY------SLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
++G +N+ Y L P + S + +V I+ G H+S +T GE++ WG+ S G+
Sbjct: 250 KVGADKNVNYFSPRADVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGR 309
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHG 212
LG G K + P VE L A G S AVT G++ +WG G +G LGHG
Sbjct: 310 LGHG--VGKNVVQPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHG 367
Query: 213 QESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
+ S + P+ I LEG+++ A G H+A I G+++ FGD +
Sbjct: 368 S---------NVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLG 418
Query: 272 FQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLT-----------SGGELYTWGSNENG 318
+ + P + L + V CG +HT + S G+L+TWG +
Sbjct: 419 HGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKN 478
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
LG G + P V + +++CG T + + G++ T G
Sbjct: 479 RLGHGDKEARLKPTCVSA-LIDYNFHKIACGHSLTVGLTTSGRVFTMG 525
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 130/300 (43%), Gaps = 50/300 (16%)
Query: 105 ISENIGYSLEP--LRISGLKKEVVQISTGY------HHSSAITVDG--ELYMWGKNS--N 152
ISE S +P +++ G +V ++S H S+ D ++Y+WG+ + N
Sbjct: 189 ISERSHASPDPTNMQVKGSASDVFRVSVSSAPSTSSHGSAPDDYDALWDVYIWGEVTCEN 248
Query: 153 GQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
++G K P +P +E + A G + VT G+V +WG G
Sbjct: 249 VKVGADKNVNYFSPRADVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGG 308
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG +++ PRL++ L + A G HS + G +Y +GD
Sbjct: 309 RLGHGVGKNVV---------QPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMH 359
Query: 268 DKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+ L G++ P I+ ++ + V CG +HT ++TS G+L+T+G G
Sbjct: 360 NAGLLGHGSNVSHWIPKRIAGPLEGLQIAF---VACGPWHTALITSTGQLFTFGDGTFGV 416
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA------------ISEGKILTWGWG 367
LG G + P V+ + V+CG HTAA IS GK+ TWG G
Sbjct: 417 LGHGDRQNVSYPREVESLLGLRTI-AVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDG 475
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 47 DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
D+ LE P E + ++CG H+L + G V+A G GQLG
Sbjct: 22 DFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG 81
Query: 107 ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
E G + P +I L +++Q+S G +HS A++ G+++ WGKNS GQLGLGK+
Sbjct: 82 EVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQ- 140
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P +V L GI Q A G S A++ G WG +G+L + G
Sbjct: 141 DSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLA------LSGNNVPVQ 194
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
Y PR I L + V + G+ H+A + +NG+V+ FGD + ++ R P L+
Sbjct: 195 SYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVE 254
Query: 286 KLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
++ ++ CG YHT + + G++ ++G
Sbjct: 255 RIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 284
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 134/275 (48%), Gaps = 45/275 (16%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+LE LR+S +S G HS A+ G ++ WG S GQLG G+ + P K+
Sbjct: 42 TLETLRVS-------LVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGE-VKGINFTPKKI 93
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ L+GI Q + G S+A++ GG+V SWG G+LG G+E S+ +P+
Sbjct: 94 KTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFP--------SQDSPQR 145
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP 288
++ LEG+ + AAG HS + +G + +G+ + ++ N + +P I L
Sbjct: 146 VRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALR 205
Query: 289 Y--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP----------ERVQG 336
+ CG HT VLT G+++T+G N G LG HSP ER+ G
Sbjct: 206 NLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG-------HSPSAQDRGPQLVERIDG 258
Query: 337 PFSESPVDQVSCGWKHTAA--ISEGKILTWGWGGS 369
V Q+ CG HT A + G+++++G G S
Sbjct: 259 -----LVSQIDCGSYHTLAYVYTTGQVVSFGRGPS 288
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 24 LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAH 82
L +C R R FA WG G G+LG G ++ + P + ++CG H
Sbjct: 59 LAVCHR------GRVFA--WGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
+L L+E G V++ G N GQLG+ + P R+ L+ + Q++ G HS A++V
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVS 170
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
G + WG NS GQL L + +P+ P + L + + G+E + +T GK
Sbjct: 171 GTSFGWGNNSAGQLAL---SGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGK 227
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V ++G G+LGH + G P+L++ ++G+ +I + A + G
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRG---------PQLVERIDGLVSQIDCGSYHTLAYVYTTG 278
Query: 258 RVYIFG 263
+V FG
Sbjct: 279 QVVSFG 284
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 61/203 (30%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P + L + + G E S+AV G+V +WGAG G+LG G+ I +
Sbjct: 37 PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGI--------NF 88
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP+ IK L G+K+
Sbjct: 89 TPKKIKTLTGIKII---------------------------------------------- 102
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQV 346
+V CG YH+ L+ GG++++WG N G LG+G SP+RV+ P+ QV
Sbjct: 103 ----QVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRS-LEGIPLAQV 157
Query: 347 SCGWKHTAAISEGKILTWGWGGS 369
+ G H+ A+S ++GWG +
Sbjct: 158 AAGGAHSFALSVSGT-SFGWGNN 179
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHSPERVQGPFSESPVDQVSCGWK 351
V CG H+ + G ++ WG+ G LG G + + +P++++ + + QVSCG
Sbjct: 51 VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKT-LTGIKIIQVSCGDY 109
Query: 352 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
H+ A+SE G++ +W G +S GQL G+ PS+
Sbjct: 110 HSLALSEGGQVFSW------------GKNSQGQLGLGKEFPSQ 140
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 161/348 (46%), Gaps = 51/348 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +GRLG P + + +K +ACG HT LT++G VY G ND
Sbjct: 328 WGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWG-NDVCC 386
Query: 103 LG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
I + +G SL+ + IS ++ G H++ ++ G L+ +G +
Sbjct: 387 ADLLIEGRTRSQWIPQKLGGSLDGISISS-------VACGEWHTAIVSSCGRLFTYGDGT 439
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLS 200
G LG G + P +VE LSG+ + AA G + A+ + GK+ +
Sbjct: 440 FGVLGHGD--LRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFT 497
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLGH + + S+ P + +L + G + + + G+V+
Sbjct: 498 WGDGDEGRLGH---------VDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVF 548
Query: 261 IFGDRAVDKMLFQEGN-HARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSN 315
G ++ GN HAR +++ + +E V G YH VLTSGG +YTWG
Sbjct: 549 AMGSAKYGQL----GNPHARDKAVMVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWGRG 604
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
ENG LG+G + ++P V+ + V+ ++CG TAAIS K ++
Sbjct: 605 ENGQLGLGDTEDRYTPCFVEA-LRDRQVNTITCGPSFTAAISLHKPIS 651
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + ALG + + T G+V WG G GRLG + I
Sbjct: 294 VPKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDI--------- 344
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
+P+++ L G+ VK A G H+ + ++G VY +G+ L EG R + K
Sbjct: 345 SSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEG-RTRSQWIPQK 403
Query: 287 LPYSEE------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
L S + V CG +HT +++S G L+T+G G LG G + SP+ V+ S
Sbjct: 404 LGGSLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVES-LSG 462
Query: 341 SPVDQVSCGWKHTAAISE------------GKILTWGWG 367
V +CG HTAAI E GK+ TWG G
Sbjct: 463 LRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDG 501
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 118/271 (43%), Gaps = 26/271 (9%)
Query: 111 YSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
YSL P L S +V I+ G H++ T GE++ WG G+ LG+K I P
Sbjct: 291 YSLVPKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGR--LGQKIDMDISSPK 348
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
V+ L+G+ K A G + A+T G+V +WG + +L R+ S++ P
Sbjct: 349 IVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCC-------ADLLIEGRTRSQWIP 401
Query: 230 -RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
+L L+G+ + A G H+A + GR++ +GD + + P + L
Sbjct: 402 QKLGGSLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLS 461
Query: 289 --YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
CG +HT + ++ G+L+TWG + G LG P RV
Sbjct: 462 GLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVT 521
Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V QVSCG T A++ GK+ G
Sbjct: 522 QLVDYDFV-QVSCGRMLTVALTNMGKVFAMG 551
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 28/342 (8%)
Query: 44 GNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
GN G+LGLG + E R + K+ LK +ACG H++ L + G V++ G NDF
Sbjct: 22 GNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDF 81
Query: 101 GQLG---------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
QLG + EN+ + ++ ++ S + V+ ++ G H A+T DG L+ WG N
Sbjct: 82 YQLGHDGIKRKPNLYENLHWYID-VKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNV 140
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLG 210
GQLG+ + +++ ++ Q A G S+A+ VL +WG G+LG
Sbjct: 141 YGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLG 200
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G S +G P + +L G+ + AAG HS + +G V+ +G ++
Sbjct: 201 IGTRESFIG---------PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQI 251
Query: 271 LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
E PSL+ KL +++V+ CG + +T+ G L+T+G+ G LG G+ +
Sbjct: 252 GQNEQRDILYPSLV-KLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNS 310
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
P++V +D V+CG HT AI+E K+ +G S
Sbjct: 311 ELFPKQVMELMGSVVLD-VACGRCHTLAITENKLYAFGLNTS 351
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 17/225 (7%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
WG+ YG+LG+ + ++ R ++ +ACG H+L L T G ++A GLND
Sbjct: 136 WGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLND 195
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLGI + + P ++ L + Q++ G HS +T G ++ WGKN GQ+G
Sbjct: 196 HGQLGIGTRESF-IGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIG-- 252
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + I P+ V+ L + A G + SVAVT G + ++GAG G+LGHG ++
Sbjct: 253 QNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQN--- 309
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
SE P+ + EL G V A G H+ I EN ++Y FG
Sbjct: 310 ------SELFPKQVMELMGSVVLDVACGRCHTLAITEN-KLYAFG 347
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 8/210 (3%)
Query: 5 SLTAMTKYYLKQDIKLGSKLGI-CKRWISSTLQRRFAAL--WGNGDYGRLGLGSLESRWR 61
++ A +Y Q+I L + + I C S L+ L WG D+G+LG+G+ ES
Sbjct: 150 NVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIG 209
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + + LA G +H+L LT +G V+ G N FGQ+G +E L P + L
Sbjct: 210 PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDI-LYPSLVKLL 268
Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+ ++V++++ G S A+T G L+ +G + GQLG G + +++ P +V L G
Sbjct: 269 RTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSEL--FPKQVMELMGSVVL 326
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
A G ++A+T K+ ++G SG+LG
Sbjct: 327 DVACGRCHTLAIT-ENKLYAFGLNTSGQLG 355
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G P + + LACG ++ +T TG ++ G +GQ
Sbjct: 243 WGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQ 302
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKK 160
LG N L P ++ L VV ++ G H+ AIT + +LY +G N++GQLG L K
Sbjct: 303 LG-HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAIT-ENKLYAFGLNTSGQLGLLNVK 360
Query: 161 AAKVIPIPTKVE 172
IP+P +E
Sbjct: 361 HTTSIPLPIPIE 372
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 154/335 (45%), Gaps = 31/335 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG GS E P + + ++ +ACG HT +T +G +Y G ++
Sbjct: 101 WGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNI 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG+ + +V +S G H++ +T G+L+ +G + G LG G
Sbjct: 161 GLLGNGTDVSHWI-PKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + P +VE LSG+ T A G + AV GK+ +WG G
Sbjct: 220 NRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V G+ V
Sbjct: 278 RLGHGDKEPKL---------KPTCVASLIDYDFCRIACGHSLTVGLTTSGQVLSMGN-TV 327
Query: 268 DKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
L + + P LI + + +V CG YH VLT+ E++TWG NG LG G +
Sbjct: 328 YGQLGNPRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDV 387
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+ P V+ + V ++CG T+AI + K
Sbjct: 388 EDRKIPTLVES-LRDRAVRHIACGSNFTSAICQHK 421
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 40/256 (15%)
Query: 142 GELYMWGK---NSNGQLGLGK------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ ++ ++G KA ++P P + + + ++ G + + V
Sbjct: 35 GDVYVWGEVICDNTVRVGPDTVIRSTAKADFLLPKPLESKLVLDVY--HVDCGVKHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G+V +WG GRLGHG +E S+ PRL++ L V I A G H+
Sbjct: 93 TKNGEVFTWGEESGGRLGHGSREDSV----------HPRLVESLAICNVDIVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSG 306
+ +G +Y +GD + L G P IS + +V CG +HT ++TS
Sbjct: 143 AVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTALVTSR 202
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
G+L+T+G G LG G+ + P V+ S V+CG HTAA+ E
Sbjct: 203 GQLFTFGDGTFGVLGHGNRESFSCPREVES-LSGLKTIAVACGVWHTAAVVEVIVTQSSS 261
Query: 359 ----GKILTWGWGGSH 370
GK+ TWG G H
Sbjct: 262 SMSSGKLFTWGDGDKH 277
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+RST++ L K LE + V G H+A + +NG V+ +G+ + ++
Sbjct: 56 VIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSRE 115
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
+ P L+ L + V CG +HTC +T+ GELYTWG ++ G LG G+ DV H P
Sbjct: 116 DSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGT-DVSHWIP 174
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+R+ G V VSCG HTA + S G++ T+G GTF GH
Sbjct: 175 KRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFG----DGTFGVLGH 218
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +GE++ WG+ S G+LG G + V P VE
Sbjct: 69 KPLE-SKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LG+G + S + P+
Sbjct: 126 LAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTD---------VSHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
I LEG +V + G H+A + G+++ FGD F H R S P
Sbjct: 177 ISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGT-----FGVLGHGNRESF--SCPRE 229
Query: 291 EE---------VVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHS 330
E V CG +HT + G+L+TWG + LG G +
Sbjct: 230 VESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLK 289
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
P V + +++CG T + + G++L+ G
Sbjct: 290 PTCV-ASLIDYDFCRIACGHSLTVGLTTSGQVLSMG 324
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 2113 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 2172
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K++ I+ G HS+AIT GELY WG G+LG G
Sbjct: 2173 KLGHGNRLNLD-KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2231
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P ++ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2232 ITQL--KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG----- 2284
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P I+ L ++V G S + + G V+ +G ++ H
Sbjct: 2285 ----SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P++I L + V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 2341 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHG 2400
Query: 337 PFSESPVDQVSCGWKHTAA 355
+ +++V+CG H+ A
Sbjct: 2401 -LEDVHINRVACGSSHSIA 2418
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 2225
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +NI L+P I L +VQ++ G + A+T +G ++ WG G+LG G
Sbjct: 2226 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 2283
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2284 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 2340
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P +I+ L+ KV A G LH + + G+VY +GD Q+GN
Sbjct: 2341 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 2389
Query: 279 ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
R+P+L+ L + V CG H+ T
Sbjct: 2390 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + P + A + + + +ACGGAH+ +T TG +Y G +G+
Sbjct: 3142 WGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 3201
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P I G K V +G + IT D ++ WG G+LG G
Sbjct: 3202 LGHGDSED-QLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 3259
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG
Sbjct: 3260 -GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG------- 3311
Query: 220 FLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T E+ P+ + L+G K+ A G LH + G V+ +GD ++ N
Sbjct: 3312 ----TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 3367
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
+RP L+S L + V CG HT
Sbjct: 3368 IQRPRLVSALQGKKITNVACGSAHT 3392
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + +K +A GG H L L+ VY+ G D G+LG + P I
Sbjct: 3107 PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACE-TPKLIE 3165
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L+ E++ I+ G HS+AIT G+LY WGK G+LG G ++ P +E L G
Sbjct: 3166 ALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKP--KLIEELVGYK 3223
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++ +T V SWG G G+LG G S P+ I+ L
Sbjct: 3224 VIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPKKIESLA 3274
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
G+ V G S + +G VY +G ++ G H RRP ++ L + +
Sbjct: 3275 GLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIA 3334
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G H + GE++TWG N+ G LG + + + P R+ + V+CG HT
Sbjct: 3335 TGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRP-RLVSALQGKKITNVACGSAHTL 3393
Query: 355 A 355
A
Sbjct: 3394 A 3394
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 158/344 (45%), Gaps = 26/344 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G VYATG G
Sbjct: 3036 WGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLV-GGEQTLFAVTADGKVYATGYGAGG 3094
Query: 102 QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI + LE ++ +KK + +++G H A++ D ++Y WG+ +G+LG
Sbjct: 3095 RLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH 3152
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + A P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3153 GNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD---- 3206
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+LI+EL G KV A +G + CI ++ V+ +GD K+
Sbjct: 3207 -----SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 3261
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ + + P++
Sbjct: 3262 DGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK 3321
Query: 334 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
V + ++ G H A S EG++ TWG G +D
Sbjct: 3322 VAA-LQGKKIISIATGSLHCVACSDEGEVFTWG-DNDEGQLGDD 3363
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 22/250 (8%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V Q STG S TV +++WG N QLG G K +KV +P + + LS ++ A
Sbjct: 2041 VAQDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAG 2095
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GK+ + G G +GRLG G +++ PR I L +K A
Sbjct: 2096 GSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVA 2146
Query: 245 --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
+G H+ + +G+V+ +G+ K+ + +P +I L + ++ CG H+
Sbjct: 2147 VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAIS 357
+TS GELYTWG E G LG G P+ ++ V QV+CG + A
Sbjct: 2207 AAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIV-QVACGSRDAQTLALTD 2265
Query: 358 EGKILTWGWG 367
EG + +WG G
Sbjct: 2266 EGWVFSWGDG 2275
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV IPT E LS + Q G + AVT GKV +
Sbjct: 3031 GTIYGWGHNHRGQLG-GIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3088
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+L P L++ ++ V +K A +G H + + V
Sbjct: 3089 GYGAGGRLGIGGTDSVL---------VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3139
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ P LI L E ++ CGG H+ +TS G+LYTWG
Sbjct: 3140 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY 3199
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G + P+ ++ +D V+CG T I++ + W WG G +G
Sbjct: 3200 GRLGHGDSEDQLKPKLIEELVGYKVID-VACGSGDAQTLCITDDDNV-WSWGDGDYGKL 3256
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG + + RP + SA + + +ACG AHTL
Sbjct: 3352 WGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTL 3393
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN +G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 32/361 (8%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + L P+ ++ L
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
A G + + +GRV+ G + + L + ++P L+ SE E+ C
Sbjct: 478 DFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H VLTS E+YTWG NG LG G + P V+ + V +SCG T
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEA-LKDRHVKSISCGSNFTTC 595
Query: 356 I 356
I
Sbjct: 596 I 596
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 33/248 (13%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G ++ +GD + + L G P +S +V+ CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
T+G G LG G + L P+ V+ S +V+CG H+AAI E
Sbjct: 386 TFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQTGANVMSK 444
Query: 360 KILTWGWG 367
K+ TWG G
Sbjct: 445 KLYTWGDG 452
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 159/336 (47%), Gaps = 17/336 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYS-LEP-LRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG + P L I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 129
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 130 ATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL 188
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 189 ------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 242
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
P+ + L V CG + LT+ G ++T G+ G LG G P R+
Sbjct: 243 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMV 301
Query: 336 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
S + QV+CG +HT A+ S G++ +G G S
Sbjct: 302 MELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSS 337
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 119/258 (46%), Gaps = 30/258 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHG---QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ +LGH + + FL LI EL+ + G HS + + G+V
Sbjct: 66 SNDYSQLGHDLPTKRPRMSPFL---------LIPELQDYVIIQICCGSRHSLALSDWGQV 116
Query: 260 YIFGDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+GD A DK + Q R+ L++K ++ CG H+ LTS GELY+W
Sbjct: 117 LSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSW 172
Query: 313 GSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG- 367
GSN G LG+ S + L + P R+ P+ ++CG H+ IS+ G + WG
Sbjct: 173 GSNIYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAVFGWGRNN 231
Query: 368 -GSHGTFSEDGHSSGGQL 384
G G E S QL
Sbjct: 232 CGQLGLNDETNRSYPTQL 249
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 172 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 231
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+++ S P ++ L+ V+ ++ G S +T +G ++ G + GQLG G
Sbjct: 232 CGQLGLNDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 290
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P V L G Q A G ++A V G+V ++G G SG+LG S+
Sbjct: 291 FSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 348
Query: 218 L 218
+
Sbjct: 349 M 349
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 227 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 286
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 287 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 346
Query: 162 AKVIP 166
+ ++P
Sbjct: 347 SLMLP 351
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
+ SG ELY WGS +G LG+G I+ Q P++ ++ V QV+CG +HT ++ GK
Sbjct: 1 MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60
Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+ G +S+ GH + R +++P
Sbjct: 61 VYACG----SNDYSQLGHDLPTK--RPRMSP 85
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
+A G H+ + E VY FG + LF+ P +I ++ + +
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT ++T G +YT+G +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 145/315 (46%), Gaps = 32/315 (10%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F+ L+CG HT +T +Y G N++GQLG+ S +P I LK E V+
Sbjct: 70 FKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVK 128
Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
++ G +H+ T G +Y G N+ GQLGLG + G FT KQ
Sbjct: 129 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQ 182
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G S A+T GK+ WG G++G +S++ P + G +
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEVTV--GKPIS 231
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGG 297
+ G+ HSA + +G +Y FG+ K+ NH R P + +P +V CGG
Sbjct: 232 WISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGG 290
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
HT VLT +Y +G + G LG+G+ S ++ + + +SCG HTA ++
Sbjct: 291 GHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMT 349
Query: 358 E-GKILTWGWGGSHG 371
+ G + T+G G HG
Sbjct: 350 DIGLMYTFG-DGRHG 363
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 29/277 (10%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLG 104
G LGLG ++S P + S K +AC G H + T G ++ G N + QLG
Sbjct: 146 GCLGLGDIQSTIEP---RRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLG 202
Query: 105 ISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A
Sbjct: 203 -NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 261
Query: 163 KVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PIP +V CL A G SVAV G+V WG G+G+LG G
Sbjct: 262 Q--PIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGS-------- 311
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
S ++ TP I L+G+ V+ A G+ H+ + + G+VY++G + ++ GN + +
Sbjct: 312 -SGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQS 368
Query: 281 ---PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 369 YPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 19/294 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ T ++ G N G LG+ + I ++EP R+ L K++ S G H
Sbjct: 124 AGNEVLYSTVNDEIFVLGTNCCGCLGLGD-IQSTIEPRRLDSLSGKKIACFSYGSGPHVI 182
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G
Sbjct: 183 LATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 241
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + +
Sbjct: 242 EVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVD 292
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 293 NGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWG 352
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
+N G LG G+ P V + ++ +C HT+A G + WG
Sbjct: 353 ANSYGQLGTGNKSNQSYPTPV-AVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G ++ +G A ++ N
Sbjct: 150 LGDIQSTIE--PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTN 207
Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS ++ EV CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 208 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 267
Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGS 369
V G V ++CG A + G++ WG+ G+
Sbjct: 268 VTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGN 304
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VY G N +G
Sbjct: 298 VWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYG 357
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 358 QLGTGNKSNQSY-PTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 410
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 411 --SVILPHLTSFSCTDDVF 427
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 145/339 (42%), Gaps = 20/339 (5%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST F WG D G+LG GS P+ S ++ A+A G H+L LT G V
Sbjct: 50 STAVSEFLLAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGTV 109
Query: 93 YATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
A G N FGQLG I S P+ +S V ++ G HS A+T G + WG N
Sbjct: 110 LAWGTNHFGQLGDGTLIDRS-APVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNG 168
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + P+ + SG+ A S+AVT G L+WG G+G+LG
Sbjct: 169 VGQLGDGSTTRRTTPV--EAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGD 226
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + + TP + G +V AAG LHS + G +G ++
Sbjct: 227 GS---------TINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQL- 276
Query: 272 FQEGNHARRPSLIS-KLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+G R + +S LP E VV G H+ LT+ G WG N G LG G
Sbjct: 277 -GDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSN 335
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
V P + S HT AI+ +G L WG
Sbjct: 336 SSEAVEVSLPTGTTLAAIASRDSDHTIAIAGDGTALAWG 374
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 130/301 (43%), Gaps = 20/301 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+L R PV S ++ A+A GG H++ LT G V A G N GQ
Sbjct: 112 WGTNHFGQLGDGTLIDRSAPVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNGVGQ 171
Query: 103 LGISENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + +E + SG+ V ++ HS A+T G WG N GQLG G
Sbjct: 172 LGDGSTTRRTTPVEAILPSGVT--VTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGST 229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V G A G S+AVT G L+WG G+G+LG G
Sbjct: 230 INRSTPV--SVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGT------- 280
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + TP + G +V AG LHSA + G +GD ++ G+++
Sbjct: 281 --TINRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSE 338
Query: 281 PSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+S LP + HT + G WGSN G LG G+ +P V
Sbjct: 339 AVEVS-LPTGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVPVAL 397
Query: 337 P 337
P
Sbjct: 398 P 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 99/242 (40%), Gaps = 19/242 (7%)
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H + V L WGKN NGQLG G +PI V G A G S+A+
Sbjct: 46 HKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPI--AVSLPLGTTVTAVAAGRFHSLAL 103
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G VL+WG G+LG G P + G V AAG +HS
Sbjct: 104 TSAGTVLAWGTNHFGQLGDGTL---------IDRSAPVEVSLPPGTTVTAVAAGGVHSMA 154
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGE 308
+ G V +G V ++ +G+ RR + + + S V H+ +TS G
Sbjct: 155 LTSVGTVLAWGGNGVGQL--GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGA 212
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
WG N G LG GS +P V P V ++ G H+ A+ S G L WG+
Sbjct: 213 ALAWGLNGTGQLGDGSTINRSTPVSVALPLGTE-VTAIAAGRLHSLAVTSVGAALAWGYN 271
Query: 368 GS 369
G+
Sbjct: 272 GT 273
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +R PV + + A+A G H+L +T G A G N GQ
Sbjct: 216 WGLNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQ 275
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
LG I S P+ ++ L EV + G HS+A+T G WG N GQLG
Sbjct: 276 LGDGTTINRS-TPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGS 334
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + +PT L+ I ++ + + ++A+ G G L+WG+ G+LG G
Sbjct: 335 NSSEAVEVSLPTG-TTLAAIASRDS----DHTIAIAGDGTALAWGSNIFGQLGDGT---- 385
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+T+ TP + G+ + AAG H+ +
Sbjct: 386 -----TTNPSTPVPVALPTGITLLTTAAGSDHTLAL 416
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 149/319 (46%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 2952 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3011
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K++ I+ G HS+AIT GELY WG G+LG G
Sbjct: 3012 KLGHGNRLNLD-KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3070
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P ++ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3071 ITQL--KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG----- 3123
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P I+ L ++V G S + + G V+ +G ++ H
Sbjct: 3124 ----SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P++I L + V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3180 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHG 3239
Query: 337 PFSESPVDQVSCGWKHTAA 355
+ +++V+CG H+ A
Sbjct: 3240 -LEDVHINRVACGSSHSIA 3257
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 3064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +NI L+P I L +VQ++ G + A+T +G ++ WG G+LG G
Sbjct: 3065 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 3122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3123 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 3179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P +I+ L+ KV A G LH + + G+VY +GD Q+GN
Sbjct: 3180 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3228
Query: 279 ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
R+P+L+ L + V CG H+ T
Sbjct: 3229 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 3259
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + P + A + + + +ACGGAH+ +T TG +Y G +G+
Sbjct: 3981 WGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 4040
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P I G K V +G + IT D ++ WG G+LG G
Sbjct: 4041 LGHGDSED-QLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4098
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG
Sbjct: 4099 -GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG------- 4150
Query: 220 FLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T E+ P+ + L+G K+ A G LH + G V+ +GD ++ N
Sbjct: 4151 ----TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 4206
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
+RP L+S L + V CG HT
Sbjct: 4207 IQRPRLVSALQGKKITNVACGSAHT 4231
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + +K +A GG H L L+ VY+ G D G+LG + P I
Sbjct: 3946 PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACE-TPKLIE 4004
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L+ E++ I+ G HS+AIT G+LY WGK G+LG G ++ P +E L G
Sbjct: 4005 ALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKP--KLIEELVGYK 4062
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++ +T V SWG G G+LG G S P+ I+ L
Sbjct: 4063 VIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPKKIESLA 4113
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
G+ V G S + +G VY +G ++ G H RRP ++ L + +
Sbjct: 4114 GLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIA 4173
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G H + GE++TWG N+ G LG + + + P R+ + V+CG HT
Sbjct: 4174 TGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRP-RLVSALQGKKITNVACGSAHTL 4232
Query: 355 A 355
A
Sbjct: 4233 A 4233
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 158/344 (45%), Gaps = 26/344 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G VYATG G
Sbjct: 3875 WGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLV-GGEQTLFAVTADGKVYATGYGAGG 3933
Query: 102 QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI + LE ++ +KK + +++G H A++ D ++Y WG+ +G+LG
Sbjct: 3934 RLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH 3991
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + A P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3992 GNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD---- 4045
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+LI+EL G KV A +G + CI ++ V+ +GD K+
Sbjct: 4046 -----SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4100
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG G+ + + P++
Sbjct: 4101 DGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK 4160
Query: 334 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
V + ++ G H A S EG++ TWG G +D
Sbjct: 4161 VAA-LQGKKIISIATGSLHCVACSDEGEVFTWG-DNDEGQLGDD 4202
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 135/309 (43%), Gaps = 25/309 (8%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C + ++K + C L LT+TG V+ + S + E +SG+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF--------MYYSSDTQCPQEMTGLSGI 513
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ H A+T D E+Y WG G+LG G + K PT ++ L G
Sbjct: 514 NMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK--EEPTLIQALKGKDIID 571
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S A++ G + +WG G GRLGHG L TP +I L +
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCL---------TPTMISALSDEHII 622
Query: 242 IAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
A G + H+ CI G+VY +GD K+ + ++ P LI KL + +V CG
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGA 682
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+ L+ G +YTWG E LG + + + PE V+ + V VS G H A++
Sbjct: 683 QFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEV-LRDRKVVGVSLGVSHVLALT 741
Query: 358 E-GKILTWG 365
+ G++ WG
Sbjct: 742 DQGEVYGWG 750
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 125/263 (47%), Gaps = 19/263 (7%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H L LT+ VY+ G D G+LG + EP I LK K+++ + G +S+AI
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDT-STKEEPTLIQALKGKDIIDVECGGTYSAAI 582
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAVTGGG 196
+ +G LY WG+ + G+LG G A+ PT + LS + A G + ++ +T G
Sbjct: 583 SANGALYTWGRGNYGRLGHG--TAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQG 640
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
KV SWG G G+LG G S PRLI++L+ VK+ G S + E+
Sbjct: 641 KVYSWGDGDYGKLGRGG---------SDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
G VY +G K+ + R P ++ L +VV G H LT GE+Y WG
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPEMVEVL-RDRKVVGVSLGVSHVLALTDQGEVYGWG 750
Query: 314 SNENGCLGIGSIDVLHSPERVQG 336
NEN + S + P ++
Sbjct: 751 KNENKQICDSSELFVQQPRLIEA 773
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 143/300 (47%), Gaps = 46/300 (15%)
Query: 89 TGC-VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
GC V+ GLND QLG + + L P+ I+G K + +S
Sbjct: 2892 VGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSH------- 2944
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG + +P P + LS K+ A+ G + ++A+T
Sbjct: 2945 ---EGKLYACGEGTNGRLGLGH--SNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLD 2999
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG ++ P++I+ L K++ A G HSA I
Sbjct: 3000 GKVFSWGEGEDGKLGHGNRLNL---------DKPKMIEALRSKKIRDIACGSSHSAAITS 3050
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYT 311
+G +Y +G ++ + +P LI L +V CG T LT G +++
Sbjct: 3051 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFS 3110
Query: 312 WGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
WG + G LG G ++ H+ ER+ V Q+ CG + + A+++ G++ TWG G
Sbjct: 3111 WGDGDFGKLGRGGSEGCNIPHNIERLNA----LEVVQIECGAQFSLALTKTGEVWTWGKG 3166
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 20/261 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G ++ P + A + + + CGG ++ ++ G +Y G ++G+
Sbjct: 539 WGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGR 598
Query: 103 L--GISENIGYSLEPLRISGLKKE-VVQISTG--YHHSSAITVDGELYMWGKNSNGQLGL 157
L G +E+ L P IS L E +++++ G Y H+ IT G++Y WG G+LG
Sbjct: 599 LGHGTAED---CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGR 655
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +P +E L + Q G + SVA++ G V +WG G +LGH E ++
Sbjct: 656 GGSDGS--KLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENV 713
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P +++ L KV + G H + + G VY +G ++
Sbjct: 714 ---------RFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELF 764
Query: 278 ARRPSLISKLPYSEEV-VCGG 297
++P LI L + V VC G
Sbjct: 765 VQQPRLIEALKGQKVVGVCCG 785
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ E P + SA + +ACG AHTL +T G VY+ G D+
Sbjct: 591 WGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDY 650
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G L P I L+ ++VQ+ G S A++ DG +Y WGK + LG
Sbjct: 651 GKLGRGGSDGSKL-PRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWK--LGH 707
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P VE L +LG +A+T G+V WG + ++ E +
Sbjct: 708 PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFV-- 765
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGR 258
PRLI+ L+G KV G S A D+N R
Sbjct: 766 -------QQPRLIEALKGQKVVGVCCGPAQSFAWTDDNER 798
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 22/248 (8%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q STG S TV +++WG N QLG G K +KV +P + + LS ++ A G
Sbjct: 2882 QDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAGGS 2936
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
+ V+ GK+ + G G +GRLG G +++ PR I L +K A
Sbjct: 2937 KSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVAVH 2987
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
+G H+ + +G+V+ +G+ K+ + +P +I L + ++ CG H+
Sbjct: 2988 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 3047
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEG 359
+TS GELYTWG E G LG G P+ ++ V QV+CG + A EG
Sbjct: 3048 ITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIV-QVACGSRDAQTLALTDEG 3106
Query: 360 KILTWGWG 367
+ +WG G
Sbjct: 3107 WVFSWGDG 3114
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV IPT E LS + Q G + AVT GKV +
Sbjct: 3870 GTIYGWGHNHRGQLG-GIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3927
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+L P L++ ++ V +K A +G H + + V
Sbjct: 3928 GYGAGGRLGIGGTDSVL---------VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3978
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ P LI L E ++ CGG H+ +TS G+LYTWG
Sbjct: 3979 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY 4038
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTF 373
G LG G + P+ ++ +D V+CG T I++ + W WG G +G
Sbjct: 4039 GRLGHGDSEDQLKPKLIEELVGYKVID-VACGSGDAQTLCITDDDNV-WSWGDGDYGKL 4095
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGF-LHSACIDENGRVYIFGDRAVDKM 270
Q + S+ P+ + L G+ +KIAA H + ++ VY +G+ ++
Sbjct: 488 QTGKVFFMYYSSDTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRL 547
Query: 271 LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ + P+LI L + +V CGG ++ +++ G LYTWG G LG G+ +
Sbjct: 548 GHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDC 607
Query: 329 HSPERVQGPFSESPVDQVSCG--WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+P + S+ + +V+CG + HT I S+GK+ +WG G +G G S G +L
Sbjct: 608 LTPTMISA-LSDEHIIKVACGSFYAHTLCITSQGKVYSWG-DGDYGKLGRGG-SDGSKLP 664
Query: 386 R 386
R
Sbjct: 665 R 665
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG + + RP + SA + + +ACG AHTL
Sbjct: 4191 WGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTL 4232
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E ++
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVIEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K++
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLD 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ + L G K+K + G
Sbjct: 32 NEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLDALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 136/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S K+V++++ G +HS +T DGE+Y WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQA- 169
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
IP +V CL A G SVAV G+V WG G+G+LG G S
Sbjct: 170 -IPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A GF H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + +LE
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGD-VQSTLE 64
Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N QLG G ++P
Sbjct: 65 PRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGS---------TANQAIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 235 VQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 293
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 294 STHTSAAKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG LG ++ST E PR + L K+ + G H
Sbjct: 38 TINDEIFVLGTNCSGCLG-------LGDVQSTLE--PRRLDSLSDKKIACLSYGSGPHII 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G ++ NH P +S +++V+ CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+Y WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN +G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 93/294 (31%), Positives = 141/294 (47%), Gaps = 19/294 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R+ PV + A+A GG H+L L G V+A G N +GQ
Sbjct: 91 WGDNYYGQLGDGTTTNRYTPVQVQNLT--GVVAIAAGGGHSLALKSDGTVWAWGYNGYGQ 148
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I P+++ L V + G H S A+ DG ++ WG N GQLG G
Sbjct: 149 LG-DGTITNRTTPVQVKNLTGVVAVAAGGGH-SLALKSDGTVWAWGYNGYGQLGDGTTMN 206
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A G S+A+ G V +WG G G+LG G
Sbjct: 207 RYTPV--QVQNLTGVVA--IAAGSSHSLALKSDGTVWAWGNNGYGQLGDGT--------- 253
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP ++ L V AAG HS + +G V+ +G ++ + P
Sbjct: 254 TTNRTTPVRVQGL--TDVVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPV 311
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ L + GG H+ L S G ++ WG+N+ G LG G+ H+P +V G
Sbjct: 312 QVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNNDWGELGDGTRTDRHTPVQVSG 365
Score = 104 bits (259), Expect = 9e-20, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 24/297 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A+ G ++L L G V+A G N +GQLG P+++ L VV I+ G H
Sbjct: 71 AVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTN-RYTPVQVQNLTG-VVAIAAGGGH 128
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ DG ++ WG N GQLG G + P+ K + A G S+A+
Sbjct: 129 SLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVK----NLTGVVAVAAGGGHSLALKS 184
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG G + + YTP ++ L GV AAG HS +
Sbjct: 185 DGTVWAWGYNGYGQLGDGT---------TMNRYTPVQVQNLTGVVA--IAAGSSHSLALK 233
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+G V+ +G+ ++ + P + L + G H+ L S G ++TWG
Sbjct: 234 SDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGW 293
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG---WG 367
N +G LG G+ ++P +VQ + + V ++ G H+ A+ S+G + WG WG
Sbjct: 294 NYSGQLGDGTTTNRYTPVQVQ---NLTGVVAIAAGGGHSLALKSDGTVWAWGNNDWG 347
Score = 94.0 bits (232), Expect = 1e-16, Method: Composition-based stats.
Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GGA +L + G V+A G G + ++G VV + G +S
Sbjct: 37 IAAGGARSLAIKSDGTVWAWG-------------GTPVPVQNLTG----VVAVEAGSFYS 79
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N GQLG G + P+ +V+ L+G+ A G S+A+
Sbjct: 80 LALKSDGTVWAWGDNYYGQLGDGTTTNRYTPV--QVQNLTGVVAIAAGGG--HSLALKSD 135
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G G+LG G T+ TP +K L GV A G HS +
Sbjct: 136 GTVWAWGYNGYGQLGDGT---------ITNRTTPVQVKNLTGVVAVAAGGG--HSLALKS 184
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V+ +G ++ + P + L + G H+ L S G ++ WG+N
Sbjct: 185 DGTVWAWGYNGYGQLGDGTTMNRYTPVQVQNLTGVVAIAAGSSHSLALKSDGTVWAWGNN 244
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
G LG G+ +P RVQG + V ++ G +H+ A+ S+G + TWGW S
Sbjct: 245 GYGQLGDGTTTNRTTPVRVQG---LTDVVAIAAGNEHSLALKSDGTVWTWGWNYS 296
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 153/331 (46%), Gaps = 48/331 (14%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
++KA+A G HTLFL G V++ G N G+LG + E Y++ P+ IS + ++QI
Sbjct: 48 TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS A++ DG L+ WG NS+GQL + + P +V L T Q A G
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+V++ GGG+V WG GR+ H +P ++ V + +AG L
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVELFVSVPIIQISAGNL 206
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGYHTCVLT 304
+ + +G ++ +G ++ GN R P + + V CG H+ LT
Sbjct: 207 FTMALTASGTLFAWGRNEEGQL----GNFTNRDVINPREVPNINSVVVVECGDSHSIALT 262
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
G +++ GS+ G LG G + R S V +++CG HT ++ GK+ T+
Sbjct: 263 HEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTF 322
Query: 365 GWGGSHGTFSEDGHSSGGQL----DRGQLTP 391
G +S GQL R Q+TP
Sbjct: 323 GL------------NSNGQLGHGNTRNQITP 341
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
V +LY++G S+GQL +A +++ P V G+ K A G + ++
Sbjct: 2 VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61
Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+ GKV S G+ +G LG G +E S YT + V++ +AG H
Sbjct: 62 LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111
Query: 250 SACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
S + ++GR++ +G + ++ + + P + LP + +V CG HT L GG
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
++ WG +G + HSP V+ F P+ Q+S G T A++ G + WG
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVE-LFVSVPIIQISAGNLFTMALTASGTLFAWGRN 223
Query: 368 --GSHGTFS 374
G G F+
Sbjct: 224 EEGQLGNFT 232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG + P +S+ + CG +H++ LT G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277
Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG S+N + + L V +I+ G H + + +G+++ +G NSNGQLG
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332
Query: 158 GKKAAKVIP-IPTKVECLSGIF 178
G ++ P + VE ++ +F
Sbjct: 333 GNTRNQITPRMIDSVENVASVF 354
>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
Length = 12743
Score = 117 bits (292), Expect = 1e-23, Method: Composition-based stats.
Identities = 105/360 (29%), Positives = 169/360 (46%), Gaps = 37/360 (10%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WGN Y LG+ S+ R +P + SA + S+ +LA H L L + V+ G+N
Sbjct: 12218 WGNNGYASLGVSDTSIYQRSKPGLANISAIQPASIISLA-SYYHVLALDDKNRVWGWGMN 12276
Query: 99 DFGQLG--ISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
GQLG +N Y+ L LR +++ IS GY HS A+ G ++ WG NS
Sbjct: 12277 WSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGSNS 12336
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+GQLG ++PI + L+G A ++A+ G++ +WG GRLG+
Sbjct: 12337 SGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRLGN 12396
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G S L +T + L KV G H +D+ G+V+ +G+ + ++
Sbjct: 12397 GSSGSYLYLPTATDQ------SALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQL- 12449
Query: 272 FQEGNHARRPSLIS-KLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
GN + SL+ K+ S + V G ++ +L G ++TWG N+ G LG G
Sbjct: 12450 ---GNGSTANSLVPVKVNLSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSLGTG 12506
Query: 324 SIDVLHSPERV-QGPFSESPVDQVSCGWK-HTAAISEG-KILTWGWGGSHGTFSEDGHSS 380
+ L++P + Q F+ + + + G H A+ E + TWG+GG + E G+ S
Sbjct: 12507 NRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESNNVWTWGYGG----YGEMGNGS 12562
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 84/319 (26%), Positives = 141/319 (44%), Gaps = 26/319 (8%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLK------ALACGGAHTLFLTETGCVYAT 95
WG G+LG G+ ++ R+ PV + S++ A++ G H+L L G V+A
Sbjct: 12273 WGMNWSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAW 12332
Query: 96 GLNDFGQLGISENIGYSLEPLRIS----GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
G N GQLG + N SL P+ + K V +T Y + A+ G+L+ WG N
Sbjct: 12333 GSNSSGQLG-TNNTQRSLVPILVDLSPLAGAKVVAAKATDYF-NMALDESGQLWAWGDNR 12390
Query: 152 NGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G + + +P T LS +G +A+ G+V +WG G+LG
Sbjct: 12391 YGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQLG 12450
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+G ++ L ++ + LEGV V+ G +S +D+ GR++ +G +
Sbjct: 12451 NGSTANSLVPVKVN-------LSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSL 12503
Query: 271 LFQEGNHARRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
P+LI + ++ V+ +H + ++TWG G +G GS
Sbjct: 12504 GTGNRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESNNVWTWGYGGYGEMGNGSY 12563
Query: 326 DVLHSPERVQGPFSESPVD 344
P V+ P +P +
Sbjct: 12564 SNSLLPIPVRIPVPSTPFE 12582
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 18 IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKA 75
I++G L R+ + WG G LG+G+ + ++ PV+ SA + S+ A
Sbjct: 10933 IEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINA 10992
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
LA G A +L L + G +++ GLN++GQLGI +S + + +S L +V I H
Sbjct: 10993 LAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADH 11052
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ A+ +G ++ WG+N GQLG+ +++P+ + L G
Sbjct: 11053 YAFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDLSVLGG 11095
Score = 72.0 bits (175), Expect = 5e-10, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 28/288 (9%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKE 124
E +++ H L L G V+A G N GQLG + + ++P G
Sbjct: 11721 EGVKIESFVSSNDHYLALDHKGRVWAWGENYGGQLGNGTYDTPQVLQPIDPAAFHGAAIV 11780
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-VIPIPTKVECLSGIFTKQAA 183
+ G+ S A+ G+L+ WG N GQLG+ + IP+P + L G K
Sbjct: 11781 AIAAGEGF--SLALDDKGQLWAWGINDRGQLGVASTIYRSTIPVPADMSALGGTRIKTLQ 11838
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVK 241
+Q + G++ +WGA R+G + S S Y P + E+ G K
Sbjct: 11839 AAGDQGYLLDELGRLWAWGA----RVGDWTG------MDSESAYAPVQVDLAEVSGGKAL 11888
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARRPSLISKLPYSE-------E 292
+AG + +DEN +V++ G+ +G + ++++ S
Sbjct: 11889 QMSAGNNYLLMLDENNQVWVLGNANNYSASSSSADGENNSDNPFLNRVDLSSLGDKSAIS 11948
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
+ G +H +L G +++WG N NG LG+ + +P V +SE
Sbjct: 11949 ISAGSHHDLLLDDEGGIWSWGYNYNGELGVDGVYQTSTPIFVAKLYSE 11996
Score = 61.2 bits (147), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 121 LKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+K V+++ H + + + + L+ WG+NSNG+LG+G + P+ T + L G
Sbjct: 10928 VKLHVIEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDG 10987
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G S+A+ G++ SWG G+LG G S+ S + L
Sbjct: 10988 ASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAF-------SRPQEVDLSNLM 11040
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG 263
G ++ A ++ +DENG V+ +G
Sbjct: 11041 GFRIVNIVAADHYAFALDENGNVWSWG 11067
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 80/315 (25%), Positives = 120/315 (38%), Gaps = 57/315 (18%)
Query: 111 YSLEPL---RISGLKKEVVQISTGY------------HHSSAITVDGELYMWGKNSNGQL 155
Y+LEPL IS E+V+ T + S + V L+ WG N L
Sbjct: 12167 YALEPLGHVEISNASMELVETKTLRCPRDDVKPFSVGSNFSLVAVGNTLWSWGNNGYASL 12226
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAA-----LGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+ + P L+ I Q A + +A+ +V WG SG+LG
Sbjct: 12227 GVSDTSIYQRSKPG----LANISAIQPASIISLASYYHVLALDDKNRVWGWGMNWSGQLG 12282
Query: 211 HGQESSILGFLRSTSEYTP-----RLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGD 264
G + + Y P ++ +E IA +AG+ HS +D GRV+ +G
Sbjct: 12283 DGTYDN--------NRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGS 12334
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCG----GYHTCVLTSGGELYTWGSNENGCL 320
+ ++ + P L+ P + V Y L G+L+ WG N G L
Sbjct: 12335 NSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRL 12394
Query: 321 GIGSI-DVLHSPERV-QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
G GS L+ P Q S + V G H A+ + G++ W W G
Sbjct: 12395 GNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQV--WAW----------G 12442
Query: 378 HSSGGQLDRGQLTPS 392
++S GQL G S
Sbjct: 12443 NNSYGQLGNGSTANS 12457
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 94 ATGLNDFGQLGIS----ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
ATG QL +S + Y +EP+ + L + +++T H+ AI G+L+ WG
Sbjct: 11310 ATGTQYHLQLSMSSIYKKQYAYKVEPVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWG 11369
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
KN+ GQLG G P+ + A+G + S+A+ G V SWG SG
Sbjct: 11370 KNTYGQLGNGSYDDITAPLTQDFSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGE 11429
Query: 209 LGHGQ 213
LG G
Sbjct: 11430 LGQGH 11434
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G HTL L ++A G N G+LGI Y+ IS L + ++ G
Sbjct: 10941 AVGRYHTL-LWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINALAAGDAF 10999
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G L+ WG N+ GQLG+G +A P + L G + A+
Sbjct: 11000 SLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFALDE 11059
Query: 195 GGKVLSWGAGGSGRLG 210
G V SWG G+LG
Sbjct: 11060 NGNVWSWGRNDLGQLG 11075
Score = 45.1 bits (105), Expect = 0.055, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRIS 119
PV + + +L +A AH L + G +++ G N +GQLG N Y PL
Sbjct: 11335 PVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWGKNTYGQLG---NGSYDDITAPLTQD 11391
Query: 120 GLKKEVV---QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
K+ V ++ G S AI G+++ WG N++G+LG G + +PIP +
Sbjct: 11392 FSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQG-HSDWAVPIPVSI 11445
Score = 41.2 bits (95), Expect = 0.86, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFLHSACIDENG 257
+WG +G LG G +Y P + I L+G + AAG S +D+ G
Sbjct: 10957 AWGRNSNGELGIGNWQD---------QYAPVMTDISALDGASINALAAGDAFSLALDDRG 11007
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLI--SKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
R++ +G ++ + RP + S L +V ++ L G +++WG
Sbjct: 11008 RLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFALDENGNVWSWG 11067
Query: 314 SNENGCLGIG 323
N+ G LGI
Sbjct: 11068 RNDLGQLGIA 11077
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 92 GCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 150
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A +
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 208
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 209 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 259
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+G++V+ A G H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 260 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 319
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 320 TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 134/294 (45%), Gaps = 19/294 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L++TE V+ G+N G LG + I ++EP R+ L K++ +S G H
Sbjct: 70 AGNEVLYVTENDEVFVLGMNCSGCLGTGD-IQSTIEPKRLDSLCGKKIACLSYGSGPHVV 128
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE+Y WG N+ QLG G ++P L + A G S+ +T G
Sbjct: 129 LATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN-LVNKKVIEVACGSHHSMVLTSDG 187
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + E
Sbjct: 188 EVYTWGYNNSGQVGSGS---------TANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE 238
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 239 NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG 298
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 365
+N G LG G+ P V + V+ +C HT+A G++ WG
Sbjct: 299 ANSYGQLGTGNKSNQSYPTTVTVD-KDRVVEIAACHSAHTSAAKTQSGQVYMWG 351
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
VT +V G SG LG G ++ST E P+ + L G K+ + G H
Sbjct: 77 VTENDEVFVLGMNCSGCLGTGD-------IQSTIE--PKRLDSLCGKKIACLSYGSGPHV 127
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
E G VY +G A ++ NH P +S ++ EV CG +H+ VLTS G
Sbjct: 128 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 187
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
E+YTWG N +G +G GS P RV V ++CG + A+ E G++ WG+
Sbjct: 188 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY 247
Query: 367 GGS 369
G+
Sbjct: 248 NGN 250
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 244 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 303
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 304 QLGTGNKSNQSY-PTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 356
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 357 --SVVLPHLTHFACTDDVF 373
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 153/331 (46%), Gaps = 48/331 (14%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
++KA+A G HTLFL G V++ G N G+LG + E Y++ P+ IS + ++QI
Sbjct: 48 TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS A++ DG L+ WG NS+GQL + + P +V L T Q A G
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+V++ GGG+V WG GR+ H +P ++ V + +AG L
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVELFVSVPIIQISAGNL 206
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGYHTCVLT 304
+ + +G ++ +G ++ GN R P + + V CG H+ LT
Sbjct: 207 FTMALTASGTLFAWGRNEEGQL----GNFTNRDVINPREVPNINSVVVVECGDSHSIALT 262
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
G +++ GS+ G LG G + R S V +++CG HT ++ GK+ T+
Sbjct: 263 HEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTF 322
Query: 365 GWGGSHGTFSEDGHSSGGQL----DRGQLTP 391
G +S GQL R Q+TP
Sbjct: 323 GL------------NSNGQLGHGNTRNQITP 341
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
V +LY++G S+GQL +A +++ P V G+ K A G + ++
Sbjct: 2 VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61
Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+ GKV S G+ +G LG G +E S YT + V++ +AG H
Sbjct: 62 LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111
Query: 250 SACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
S + ++GR++ +G + ++ + + P + LP + +V CG HT L GG
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
++ WG +G + HSP V+ F P+ Q+S G T A++ G + WG
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVE-LFVSVPIIQISAGNLFTMALTASGTLFAWGRN 223
Query: 368 --GSHGTFS 374
G G F+
Sbjct: 224 EEGQLGNFT 232
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG + P +S+ + CG +H++ LT G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277
Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG S+N + + L V +I+ G H + + +G+++ +G NSNGQLG
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332
Query: 158 GKKAAKVIP-IPTKVECLSGIF 178
G ++ P + VE ++ +F
Sbjct: 333 GNTRNQITPRMIDSVENVASVF 354
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 27/291 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 62 MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 121
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL
Sbjct: 122 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 179
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K +P V G + G+ S +TG G++ ++G +G+LG E
Sbjct: 180 DKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 232
Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIF-----GDRAVDKMLF 272
L+++ P L I E KV A G H+ + E G VY F G +LF
Sbjct: 233 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 285
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L S ++ V CG HT V+ G ++T+G +G LG+G
Sbjct: 286 KTSVPKSVKHLRSHKIHN--VTCGESHTAVIAENGLMFTFGDGRHGKLGLG 334
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + V IS G H++ +T +G+LYM+G N GQLGLG
Sbjct: 21 FGKSNFAENI-----PSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 75
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + PT V+ L TK A G ++ T G V + G G+LG G
Sbjct: 76 K--NTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTT 133
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S +T + K+K AAG SA + E+G+++++GD + ++ +
Sbjct: 134 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVS 185
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGP 337
P + + CG YH+ +T GELYT+G ENG LG+ + +S P+ V G
Sbjct: 186 VPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGI 245
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTF 373
+ V++V+CG +HT ++E + T+G G HGT
Sbjct: 246 MEK--VNKVACGGEHTVVLTETGVYTFGLGQYGQLGHGTL 283
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 149/309 (48%), Gaps = 32/309 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
++CG HT +T G +Y G ND+GQLG+ S+N +P + LK E +++ G +
Sbjct: 44 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNT--VRKPTCVKALKPEKTKLAVCGRN 101
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
H+ T G +Y G NS GQLGLG + T +S FT KQ A G
Sbjct: 102 HTLVYTEKGNVYAAGGNSEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 155
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S AVT G++ WG G++G ++ + P + G V + G+
Sbjct: 156 SAAVTEDGQLFVWGDNSEGQIGLADKTCV---------SVPCQVD--VGKPVSSISCGYY 204
Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
HSA I +G +Y FG+ K +L ++ ++R P ++ + +V CGG HT VLT
Sbjct: 205 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 264
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
G +YT+G + G LG G++ S + + V+CG HTA I+E G + T+
Sbjct: 265 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTF 323
Query: 365 GWGGSHGTF 373
G G HG
Sbjct: 324 G-DGRHGKL 331
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G G YG+LG G+L + P H + + CG +HT + E G ++ G G
Sbjct: 270 FGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHG 329
Query: 102 QLGI-SENIGYSLEP 115
+LG+ EN +P
Sbjct: 330 KLGLGEENFANQFDP 344
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F ++ +ACGG H L
Sbjct: 323 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVF 368
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 21/245 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG S GQLGLG +++ P + + + G +V V G V + G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH S P + L+ + A G H+ +++ G+VY +G
Sbjct: 61 NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ Q R P I L + +V CG YH+ L+ E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 321 GIGSIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG--GSHGTFSE 375
G+G ID SP+ ++ P QV+ G H+ ++ G I WG G G E
Sbjct: 170 GLG-IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 376 DGHSS 380
+G +
Sbjct: 228 NGRCA 232
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIG 110
QLG+++ G
Sbjct: 221 QLGLNDENG 229
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGG---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-- 282
++ TP + L+G++V+ AA G+ H+ + + G+VY++G + ++ GN + +P
Sbjct: 244 NQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQPYPT 301
Query: 283 --LISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
++ K E C HT T GG +Y WG
Sbjct: 302 PIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G KV + G H
Sbjct: 62 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLTGKKVACLSYGSGPHVV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS ++ EV CG YH+ VLTS GE
Sbjct: 113 LATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYS 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG ++ P +A + ++ ACG AHTL LT+ G VY G N +G
Sbjct: 228 VWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + N P I K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLG-TGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 139/330 (42%), Gaps = 29/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L R P A+A G H L + E G ++A G N GQ
Sbjct: 883 WGGNASGQLGDGTLTDRALPAHVEHLSN--AVAVAVGETHALAVGEDGALWAWGANGSGQ 940
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P+R+ GL++ V ++ G S A+ DG + WG N +GQLG G A
Sbjct: 941 LG-DGGTAPSLTPVRVKGLER-VASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHA 998
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P +V L GI A G VA++ G V +WG G+LG G S
Sbjct: 999 R--SVPNQVTSLKGIRAMSA--GAHHVVALSADGTVWTWGDNTLGQLGDGSSSP------ 1048
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY------IFGDRAVDKMLFQEGN 276
+ PR + EL GV+ A F + +D R + GD L
Sbjct: 1049 --TGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAV 1106
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P + P V G H V S G + TWG N G LG G+ P V G
Sbjct: 1107 KIEGPKI---RPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYG 1163
Query: 337 PFSESPVDQVSCG-WKHTAAISEGKILTWG 365
S V VS G W A +S+G + WG
Sbjct: 1164 LAS---VVAVSSGAWHSLALLSDGTVWAWG 1190
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 155/354 (43%), Gaps = 38/354 (10%)
Query: 27 CKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG 79
C R ++S +Q A WG G+LG G+ R P + + ALA G
Sbjct: 810 CVRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLR--GVVALAAG 867
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G ++ L G V++ G N GQLG +L P + L V ++ G H+ A+
Sbjct: 868 GDASVALRADGSVWSWGGNASGQLGDGTLTDRAL-PAHVEHLSNAVA-VAVGETHALAVG 925
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG L+ WG N +GQLG G A + P+ +V+ L + + A F SVAV G
Sbjct: 926 EDGALWAWGANGSGQLGDGGTAPSLTPV--RVKGLERVASVAAGRAF--SVAVRDDGTAW 981
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG SG+LG G + P + L+G++ +AG H + +G V
Sbjct: 982 AWGTNPSGQLGDGTNH---------ARSVPNQVTSLKGIRAM--SAGAHHVVALSADGTV 1030
Query: 260 YIFGDRAVDKMLFQEGNHARRPS-----LISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+ +G D L Q G+ + P+ + +L E V G T + G WGS
Sbjct: 1031 WTWG----DNTLGQLGDGSSSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGS 1086
Query: 315 NENGCLGIGSIDVLHSPE--RVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWG 365
NE G LG G +P +++GP PV V +H +S+G + TWG
Sbjct: 1087 NEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWG 1140
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 149/324 (45%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P+ E+ +KA+A + +L L +TG V+A G N GQ
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLER--VKAVASMDSDSLALLDTGAVFAWGANGSGQ 340
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P + GL V + G H+ + DG L+ WG +GQLG G
Sbjct: 341 LGDGDTTDRA-TPGPVPGLNA-VASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSER 398
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+P P V L+G+ + A G S+A G G V +WG G+LG G + +R
Sbjct: 399 HVVPAP--VMRLAGVTSM--ATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVR 454
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++ L GV+ +AA HS + +G V+ +G A ++ RP
Sbjct: 455 ---------VEGLGGVRSVASAA--HHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPV 503
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L V GG H L S G ++ WG N G LG G+ +P RV G
Sbjct: 504 AVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSG---LGA 560
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
V V+ G + A+ S+G + TWG
Sbjct: 561 VVAVAAGSYFSMALQSDGTVWTWG 584
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 146/308 (47%), Gaps = 25/308 (8%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV +A E + ++ G AH+L L G V+ G N GQLG + P+R++GL
Sbjct: 102 PVRLAALEN--IVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRA-TPMRVAGL 158
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
VV ++ G HS A+ DG ++ WG N +GQLG G + P +V L+G+
Sbjct: 159 DS-VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTP--EQVPGLNGVVALA 215
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
A GF+ ++AV G V +WG+ GSG+LG G ST +P + EL G+ +V
Sbjct: 216 A--GFDFTLAVLEDGTVRAWGSNGSGQLGDGT---------STQRLSPVKVSELSGITEV 264
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
+ AG H+ + ++G V+ +G A ++ N P + L + V +
Sbjct: 265 R---AGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
L G ++ WG+N +G LG G +P V G + V V G +H + +
Sbjct: 322 LALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPG---LNAVASVVGGAQHALVLRKDG 378
Query: 361 ILTWGWGG 368
L W WGG
Sbjct: 379 TL-WAWGG 385
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 17/295 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R RPV + + A+ GG H L + G V+ G N FGQ
Sbjct: 1189 WGANGFGQLGDGTSTPRTRPVQVAGLGD--VVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P R+ GL+ VV ++ G H+S A+ DG L WG N++GQLG G
Sbjct: 1247 LGDGTAESRSL-PTRVEGLEG-VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT 1304
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ ++V G +VA+ G G V +WG G+LG G + +
Sbjct: 1305 RY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM---- 1356
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
PR + L V AG H+ + G V+ +G + ++ + + P
Sbjct: 1357 ---RLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPL 1411
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ +L V G + + G + +WGS+ G LG+G+ SP +V P
Sbjct: 1412 RVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQVALP 1466
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 155/331 (46%), Gaps = 29/331 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G PV E+ + ++A G A ++ + + G +A G N GQ
Sbjct: 933 WGANGSGQLGDGGTAPSLTPVRVKGLER--VASVAAGRAFSVAVRDDGTAWAWGTNPSGQ 990
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N S+ P +++ LK + +S G HH A++ DG ++ WG N+ GQLG G +
Sbjct: 991 LGDGTNHARSV-PNQVTSLKG-IRAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSP 1048
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V L G+ + A G + +VAV G +WG+ G+LG G +
Sbjct: 1049 TGM-WPRQVPELRGV--EAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDG---------K 1096
Query: 223 STSEYTPRLIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ + TP +K +EG K V+ A H+ +G V +GD ++ +G
Sbjct: 1097 TGPQLTPMAVK-IEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQL--GDGTTT 1153
Query: 279 RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
RR P + L V G +H+ L S G ++ WG+N G LG G+ P +V G
Sbjct: 1154 RRAVPLTVYGLASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAG 1213
Query: 337 PFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
V + G H A+ S+G + TWG+
Sbjct: 1214 ---LGDVVAIGSGGYHALAVCSDGSVWTWGY 1241
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 136/294 (46%), Gaps = 18/294 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L+L+ G V+A G N GQLG +E L P+R++ L+ +V + +G HS
Sbjct: 63 IAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALEN-IVSVVSGDAHS 121
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG NS+GQLG G + P+ +V L + A G S+A+
Sbjct: 122 LALGADGSVWTWGGNSSGQLGDGTTTDRATPM--RVAGLDSVVA--VAAGDFHSLALRED 177
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G L TP + L GV AAGF + + E
Sbjct: 178 GTVWAWGTNFHGQLGRGHTQPGL---------TPEQVPGLNGVVAL--AAGFDFTLAVLE 226
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V +G ++ P +S+L EV G YH L G ++TWGSN
Sbjct: 227 DGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWGSN 286
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
+G LG G+ + P +V G V + A + G + WG GS
Sbjct: 287 ASGQLGDGTWNDRAVPMQVPGLERVKAVASMDS--DSLALLDTGAVFAWGANGS 338
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 147/327 (44%), Gaps = 23/327 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P ++ + ++A++ G H + L+ G V+ G N GQ
Sbjct: 983 WGTNPSGQLGDGTNHARSVPNQVTSLK--GIRAMSAGAHHVVALSADGTVWTWGDNTLGQ 1040
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ L+ V ++ G + A+ +DG WG N GQLG GK
Sbjct: 1041 LGDGSSSPTGMWPRQVPELRG-VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGP 1099
Query: 163 KVIPIPTKVE---CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ K+E + T +A + +V G V +WG G+LG G
Sbjct: 1100 QLTPMAVKIEGPKIRPPVRTVRAW--GQHAVVQMSDGTVQTWGDNTFGQLGDGT------ 1151
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T P + L V ++G HS + +G V+ +G ++
Sbjct: 1152 ---TTRRAVPLTVYGL--ASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRT 1206
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
RP ++ L + GGYH + S G ++TWG N G LG G+ + P RV+G
Sbjct: 1207 RPVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEG--- 1263
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWG 365
V V+ G ++ A+ S+G + WG
Sbjct: 1264 LEGVVAVAGGDHYSLALHSDGTLSAWG 1290
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 146/328 (44%), Gaps = 25/328 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G E R VV + + + + ++A G H+L G V+A G N +G
Sbjct: 383 WGGGLSGQLGHGGSE---RHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYG 439
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + +R+ GL V +++ HHS A+ +DG ++ WG+N+ GQLG G
Sbjct: 440 QLG-DGSTAERHAAVRVEGLGG-VRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTL 497
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V L+ + A G +A+ G V +WG G+LG G
Sbjct: 498 DRARPV--AVPGLTSV--TAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGT-------- 545
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP + L G V +AA + S + +G V+ +G+ ++ G P
Sbjct: 546 -TVDRLTPVRVSGL-GAVVAVAAGSYF-SMALQSDGTVWTWGEGFEGQLGDGGGVQRLSP 602
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ L V G H + G ++ WG N G LG GS P +V G
Sbjct: 603 VRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPG---LQ 659
Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGG 368
+ VS G H+ A+ +G + WG+ G
Sbjct: 660 GITAVSGGRSHSMALQGDGTVRAWGYNG 687
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 163/444 (36%), Gaps = 125/444 (28%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R RPV S+ A+A GG+H L L G V+A G N GQ
Sbjct: 483 WGRNAAGQLGDGTTLDRARPVAVPGLT--SVTAVAAGGSHVLALRSDGSVWAWGYNALGQ 540
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+R+SGL VV ++ G + S A+ DG ++ WG+ GQLG G
Sbjct: 541 LGDGTTV-DRLTPVRVSGLGA-VVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQ 598
Query: 163 KVIPI------------------------------------------------PTKVECL 174
++ P+ P +V L
Sbjct: 599 RLSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGL 658
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
GI G S+A+ G G V +WG G G+LG G TS P LI
Sbjct: 659 QGITAVSG--GRSHSMALQGDGTVRAWGYNGYGQLGDGTL---------TSRVRPALIPG 707
Query: 235 LEGVK----------------------------VKIAAAGF------------------- 247
L G++ + + AAG+
Sbjct: 708 LTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVG 767
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
H+ + +G V +G+ ++ H P + +P V G H+ L
Sbjct: 768 RAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASGIQHSLALACD 827
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
G ++ WG+N G LG G+ +P V+G V + G A ++G + W W
Sbjct: 828 GTVWAWGANARGQLGDGTTTPRVTPGLVEG--LRGVVALAAGGDASVALRADGSV--WSW 883
Query: 367 GGSHGTFSEDGHSSGGQLDRGQLT 390
GG ++ GQL G LT
Sbjct: 884 GG----------NASGQLGDGTLT 897
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 143/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 61 LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 119
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 120 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 177
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + ++
Sbjct: 178 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN---------NVNQ 228
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 229 LTP----------VRVAA---LHSVCVNQ------------------------------- 244
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 245 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 297
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 298 ACHSAHTSAAKTQGGHVYMWG 318
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 106 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 165
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 166 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 224
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 225 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 282
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 283 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 318
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + IP K+E
Sbjct: 20 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 76
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 77 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 133
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 134 IKQVVEV-----ACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 188
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 189 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVC-VNQIVC 247
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 248 GYAHTLALTDEGLLYAWG 265
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 212 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 271
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 272 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 323
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 324 -SVILPHLTHLSCTDDVF 340
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 39 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------IPKKLEALCGKKIKSLSYG 89
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 90 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVA 149
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 150 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 209
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 210 YGWGYNGN------------GQLGLGNNVNQLTP 231
>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
Length = 1120
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 155/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + A ++ +ACG HT +T G +Y G ++
Sbjct: 303 WGEESGGRLGHGVGKNVIQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RI+G + +V ++ G H++ IT G+L+ +G + G LG G
Sbjct: 363 GLLGHGTDVSHWI-PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 421
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
+ + + P +VE LSG+ T A G QS A K+ +WG G
Sbjct: 422 DR--ENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKN 479
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G V+ G +V
Sbjct: 480 RLGHGDKDARL---------EPTCVSLLIDSNFHRIACGHSLTVGLTTSGEVFTMGS-SV 529
Query: 268 DKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + + P L+ KL EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 530 YGQLGNPQSDGKVPCLVKDKLAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 589
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
++ +P V+ + V ++CG ++AAI
Sbjct: 590 VEDRKTPTLVEA-LKDRHVKYIACGSNYSAAI 620
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 29/259 (11%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V+QI+ G H++ +T GEL+ WG+ S G+LG G K + P VE ++ A
Sbjct: 280 DVLQIACGVKHAALVTRQGELFTWGEESGGRLGHG--VGKNVIQPRLVEAMASTTVDFVA 337
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKV 240
G + AVT G++ +WG G +G LGHG + S + P+ I LEG++V
Sbjct: 338 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD---------VSHWIPKRIAGPLEGLQV 388
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
+ G H+A I G+++ FGD + + + P + L + V CG +
Sbjct: 389 ALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVW 448
Query: 299 HTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
HT + S +L+TWG + LG G D P V +S +++
Sbjct: 449 HTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCV-SLLIDSNFHRIA 507
Query: 348 CGWKHTAAI-SEGKILTWG 365
CG T + + G++ T G
Sbjct: 508 CGHSLTVGLTTSGEVFTMG 526
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 37/255 (14%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ + ++G K A+ P +P +E + Q A G + + VT
Sbjct: 236 GDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVT 295
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ +WG GRLGHG +++ PRL++ + V A G H+ +
Sbjct: 296 RQGELFTWGEESGGRLGHGVGKNVI---------QPRLVEAMASTTVDFVACGEFHTCAV 346
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G P I+ P V CG +HT ++TS G
Sbjct: 347 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-PLEGLQVALVTCGPWHTALITSTG 405
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+L+T+G G LG G + + P V+ S V+CG HTAA+ E
Sbjct: 406 QLFTFGDGTFGVLGHGDRENVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSAS 464
Query: 359 ---GKILTWGWGGSH 370
K+ TWG G +
Sbjct: 465 VSSDKLFTWGDGDKN 479
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 136/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 147/339 (43%), Gaps = 30/339 (8%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
NG+ G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 NGESGKPIRATLSSLKMLDVGKWPMFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + I ++EP ++ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-IQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + KV + A G + S + + G V+++G ++
Sbjct: 187 GS---------TANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P I+ L + V CG HT VLT G++Y WG+N G LG G+
Sbjct: 238 GLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
P V + ++ +C HT+A G + WG
Sbjct: 298 SYPTPVVVE-KDRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCCGCLG-------LGDIQSTIE--PRKLDSLSGKKIACLSYGSGPHVV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G + ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPYLTHFSCTDDVF 357
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 17/295 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ SR PV + +K + A+ GG H L + G V+A G N FGQ
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQ 1237
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+R+ GL V ++ G HHS A+ DG L WG N+ GQLG G
Sbjct: 1238 LG-DGTAESRLLPVRVEGLSN-VTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTT 1295
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ + V+ + G+ +A G ++A+ G G V +WG +LG G +S+
Sbjct: 1296 RYSRV--WVKGVDGVVEVRA--GAAHTLALRGDGTVWTWGDNTHSQLGAGDDST------ 1345
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ PR + L GV AG HS + G V+ +G + ++ + + P
Sbjct: 1346 -RTRIVPRPVPGLSGVTA--IGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPL 1402
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ +L V G + + G + +WGS+ +G LG+G+ SP +V P
Sbjct: 1403 RVKELAEVSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVALP 1457
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 153/324 (47%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R RPV S S+ A+A GG+HT+ L G V+A G N GQ
Sbjct: 474 WGRNAAGQLGDGSTRDRARPVAVSGLT--SVVAVATGGSHTMALRGDGTVWAWGYNALGQ 531
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+R++ L VV ++ G + S A+ DG ++ WG+ GQ+G G
Sbjct: 532 LGDGTTV-DRLTPVRVARLDS-VVAVAAGTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQ 589
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + + A G ++AV G G V +WG G G+LG G S
Sbjct: 590 RLFPV--QVAGLTNV--TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWS------- 638
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + L G+ + G HS + +G V +G ++ RP+
Sbjct: 639 --DRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPA 694
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++ L + + H L + G L WG N G LG+G+ P +V+G
Sbjct: 695 VVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRG---LGR 751
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
VD+++ G HT + +G +L WG
Sbjct: 752 VDRLAVGRAHTLMVRPDGAVLAWG 775
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 138/296 (46%), Gaps = 22/296 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L+++ TG V+A G N GQLG L P + +++V + +G HS
Sbjct: 54 IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPS-PRDIVSVVSGEAHS 112
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG NS+GQLG G +V P+ +V L+ + A G S+A+ G
Sbjct: 113 LALDEAGTVWAWGGNSSGQLGDGTTTDRVTPM--QVAGLTDVVA--VAAGDFHSLALRGD 168
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G L TP + LEGV AAGF + + +
Sbjct: 169 GTVWAWGTNFHGQLGRGHTEPGL---------TPEPVPGLEGVVAL--AAGFDFTLAVMD 217
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V +G + ++ +G +R P ++ + V G YH L G ++TWG
Sbjct: 218 DGTVRAWGANSSGQL--GDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVWTWG 275
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
+N +G LG G+ P RV G V + A + G +L WG GS
Sbjct: 276 ANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDA--SSLALLEAGSVLAWGANGS 329
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 142/324 (43%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P E+ +KA+A A +L L E G V A G N GQ
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLER--VKAVASMDASSLALLEAGSVLAWGANGSGQ 331
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S + P + GL+ V + G H+ A+ DG L+ WG GQLG G
Sbjct: 332 LGDSGTDDRA-TPGEVPGLRS-VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSER 389
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+P P L A G S+A G G V SWG G+LG G + +R
Sbjct: 390 HVVPAP----LLRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVR 445
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++ L G++ +AA+G HS + +G V+ +G A ++ RP
Sbjct: 446 ---------VEGLSGIR-GVAASGH-HSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPV 494
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+S L V GG HT L G ++ WG N G LG G+ +P RV
Sbjct: 495 AVSGLTSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVA---RLDS 551
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
V V+ G + A+ +G + TWG
Sbjct: 552 VVAVAAGTYFSMALRGDGTVWTWG 575
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 23/327 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ S+ P ++ ++ ++A++ G H + L E G V+ G N GQ
Sbjct: 974 WGANPSGQLGDGTNHSQRVPKQVTSVKR--VRAMSAGAHHVVALGEDGAVWTWGDNTLGQ 1031
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ L+ +V ++ G S A+ V G + WG N GQLG GK
Sbjct: 1032 LGDGTSAPTWMWPRQVPELR-DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGP 1090
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ ++E + + Q +VA+ G V +WG G+LG G
Sbjct: 1091 RLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT-------- 1142
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ P +++ L GV + G HS + +G V+ +G ++ +G R
Sbjct: 1143 -TERRAAPVVVRGLTGVVA--VSTGAWHSLALRSDGTVWAWGANGFGQL--GDGTTLSRT 1197
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P ++ L + GGYH + S G ++ WG N G LG G+ + P RV+G
Sbjct: 1198 TPVRVAGLQKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEG--- 1254
Query: 340 ESPVDQVSCGWKHT-AAISEGKILTWG 365
S V V+ G H+ A +++G + WG
Sbjct: 1255 LSNVTSVAGGDHHSLALLADGSLGAWG 1281
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 144/326 (44%), Gaps = 22/326 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G R + ++ G AH+L L E G V+A G N GQ
Sbjct: 73 WGGNTSGQLG-GEATPLQRLAPAPLPSPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++++GL +VV ++ G HS A+ DG ++ WG N +GQLG G
Sbjct: 132 LGDGTTT-DRVTPMQVAGL-TDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEP 189
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P V L G+ A GF+ ++AV G V +WGA SG+LG G
Sbjct: 190 GLTPEP--VPGLEGVVALAA--GFDFTLAVMDDGTVRAWGANSSGQLGDGT--------- 236
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P + + G+ AG H+ + ++G V+ +G + ++ + P+
Sbjct: 237 FTQRLAPVEVAHISGISA--VTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPA 294
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + V + L G + WG+N +G LG D +P V G S
Sbjct: 295 RVPGLERVKAVASMDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPGLRS--- 351
Query: 343 VDQVSCGWKHTAAISEGKILTWGWGG 368
V V G +H A+ G W WGG
Sbjct: 352 VAAVVGGAQHALAL-RGDGTLWAWGG 376
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 151/340 (44%), Gaps = 30/340 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ SR P + A +L L G +A G N GQ
Sbjct: 824 WGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQ 881
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P ++ L ++ ++ G H A DG L+ WG N +GQLG G
Sbjct: 882 LGDGSTSDRAV-PGQLK-LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP 939
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P +V+ L G+ + A F S+AV G +WGA SG+LG G
Sbjct: 940 S--PTPVRVKGLEGVASVSAGRAF--SLAVRQDGTAWAWGANPSGQLGDG---------- 985
Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ ++ R+ K++ VK V+ +AG H + E+G V+ +GD + ++ +G A
Sbjct: 986 --TNHSQRVPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGDNTLGQL--GDGTSAPTW 1041
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP--ERVQG 336
P + +L E V G + + GG + WGSNE G LG G +P R++
Sbjct: 1042 MWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEA 1101
Query: 337 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
PV V +H A+ ++G + WG +HG +
Sbjct: 1102 SKLRQPVRTVRAWAQHAVALMADGTVQAWG-DNAHGQLGD 1140
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 29/331 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS PV E + +++ G A +L + + G +A G N GQ
Sbjct: 924 WGANGSGQLGEGSTTPSPTPVRVKGLE--GVASVSAGRAFSLAVRQDGTAWAWGANPSGQ 981
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N + P +++ +K+ V +S G HH A+ DG ++ WG N+ GQLG G A
Sbjct: 982 LGDGTNHSQRV-PKQVTSVKR-VRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAP 1039
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V L + + A G + SVAV GG +WG+ G+LG G+ L
Sbjct: 1040 TWM-WPRQVPELRDV--EAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRL---- 1092
Query: 223 STSEYTPRLIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
TP ++ +E K V+ A H+ + +G V +GD A ++ +G
Sbjct: 1093 -----TPVQVR-IEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQL--GDGTTE 1144
Query: 279 RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
RR P ++ L V G +H+ L S G ++ WG+N G LG G+ +P RV G
Sbjct: 1145 RRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAG 1204
Query: 337 PFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
V + G H A+ S+G + WG+
Sbjct: 1205 ---LQKVVAIGAGGYHALAVRSDGSVWAWGY 1232
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 162/354 (45%), Gaps = 41/354 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R+RPV + A++ G +H++ L G V A G N +GQ
Sbjct: 624 WGDNGEGQLGDGTWSDRFRPVQVPGLT--GITAVSGGRSHSMALHGDGSVRAWGYNGYGQ 681
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P + GL + + + H A+ DG L WG N GQLGLG AA
Sbjct: 682 LG-DGTFTSRVRPAVVPGLTG-IQALHPSHLHVLALHADGTLRGWGYNRFGQLGLG--AA 737
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L + + A+G ++ V G VL+WG SG+LG G
Sbjct: 738 GWSSRPVQVRGLGRV--DRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGT--------- 786
Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+T P L++ GV V+ A+G LHS + +G V+ +G A + +G A R
Sbjct: 787 TTHRAGPVLVR---GVPCVRSVASGVLHSLALACDGSVWAWG--ANGRGQLGDGTTASRV 841
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P+ + L + V GG + L + G + WG+N +G LG GS P +++ P
Sbjct: 842 IPARVDGLQGAVAVAAGGDASLALLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLP-- 899
Query: 340 ESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
S + V+ G H AA +G + WG GS GQL G TPS
Sbjct: 900 -SNIMSVALGETHGLAAGEDGALWAWGANGS------------GQLGEGSTTPS 940
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 145/338 (42%), Gaps = 29/338 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +YG+LG G R PV + ++ + ++ + H + L G V A G N
Sbjct: 1075 WGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNA 1134
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG P+ + GL VV +STG HS A+ DG ++ WG N GQLG G
Sbjct: 1135 HGQLG-DGTTERRAAPVVVRGLTG-VVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGT 1192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + A G ++AV G V +WG G+LG G S L
Sbjct: 1193 TLSRTTPV--RVAGLQKVVAIGA--GGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRL- 1247
Query: 220 FLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L +EG+ V A G HS + +G + +G+ A ++ G
Sbjct: 1248 -----------LPVRVEGLSNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTR 1296
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQG 336
+ + EV G HT L G ++TWG N + LG G S P V G
Sbjct: 1297 YSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPG 1356
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTF 373
S V + G +H+ A+ K W WG SHG
Sbjct: 1357 ---LSGVTAIGAGARHSFAVGP-KGTVWAWGRNSHGQL 1390
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 109/248 (43%), Gaps = 32/248 (12%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI---PIPTKVECLSGIFTKQA 182
++I+ G HS ++ G ++ WG N++GQLG + + P+P+ + +S + +
Sbjct: 52 MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAH 111
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+L +++ G V +WG SG+LG G +T TP + L V
Sbjct: 112 SLALDEA------GTVWAWGGNSSGQLGDGT---------TTDRVTPMQVAGL--TDVVA 154
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEEVV---CGGY 298
AAG HS + +G V+ +G Q G P L + +P E VV G
Sbjct: 155 VAAGDFHSLALRGDGTVWAWG----TNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFD 210
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
T + G + WG+N +G LG G+ +P V S + V+ G H A+
Sbjct: 211 FTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVA---HISGISAVTAGTYHAVALGK 267
Query: 358 EGKILTWG 365
+G + TWG
Sbjct: 268 DGGVWTWG 275
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 154/338 (45%), Gaps = 27/338 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S S+ LACGGAH + LT G V+ G GQ
Sbjct: 20 WGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +L P +S V+ Q + G+ HS ++ G L+ G S GQLG G
Sbjct: 80 LGHGDILNITL-PKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNM 138
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ + P KV S K A G S+ + G +V +G+G G+LG +
Sbjct: 139 S--LRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDG------ 190
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ S P ++ L+ V+V +A HSA I +G+ + +G F G + P
Sbjct: 191 -TKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRG------FCAGPDVQTP 243
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN-----ENGCLGIGSIDVLHSPERVQG 336
+ +V G H +LT GE++ G+ E L I S + L +
Sbjct: 244 QCLPSSLSFRKVAVGWNHALLLTVDGEVFKLGNTLNKQPEKQQLQIDSSEALLAKVS--- 300
Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
F V Q++ G +H+AA++E GK+ TWGW G HG
Sbjct: 301 DFDGVKVLQIAAGAEHSAAVTENGKVKTWGW-GEHGQL 337
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 24/298 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + + P + S F+ + + A G +H+ F++++GC++ G FGQ
Sbjct: 72 WGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N+ P ++S E V+ ++ G HS + ++ +G GQLG
Sbjct: 132 LGHGDNMSLR-TPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDG 190
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K + +P V L + + + + S A++ G+ SWG G F
Sbjct: 191 TKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRG---------------FC 235
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP+ + + + A G+ H+ + +G V+ G+ + Q+
Sbjct: 236 AGPDVQTPQCLPS--SLSFRKVAVGWNHALLLTVDGEVFKLGNTLNKQPEKQQLQIDSSE 293
Query: 282 SLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+L++K+ + ++ G H+ +T G++ TWG E+G LG+G+ + SP+ V
Sbjct: 294 ALLAKVSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQTSPQLV 351
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 117/232 (50%), Gaps = 21/232 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG ++GQLG K +++P + L I A G +A+T GKV +WG
Sbjct: 16 QVWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSDGKVFTWG 73
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G SG+LGHG +I P+L+ +G + AAAG+ HS + ++G ++
Sbjct: 74 RGSSGQLGHGDILNI---------TLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTC 124
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENG 318
G+ + ++ + R P+ +S +S E V CG H+ VL +G ++ +GS + G
Sbjct: 125 GNGSFGQLGHGDNMSLRTPAKVSY--FSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRG 182
Query: 319 CLGIGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
LG S ++ P V G + V ++S H+AAIS +G+ +WG G
Sbjct: 183 QLGFTSDGTKSVNLPCVVSG-LKDVEVTRISANGDHSAAISADGQFFSWGRG 233
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 146/320 (45%), Gaps = 26/320 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
G + +G + ++ N + +P I L + CG HT VL G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
T+G N +G LG P ER+ G V Q+ CG HT A + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 366 WGGSHGTFSEDGHSSGGQLD 385
G S + + G D
Sbjct: 314 HGPSDTSKPTHPEALTGNFD 333
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 24/256 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 355 A-ISEGKILTWGWGGS 369
I +GK+ T+G S
Sbjct: 250 VLIQDGKVFTFGDNSS 265
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P + L + + G E + + GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK V+ IS G H++ + DG+++ +G NS+GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPSD 318
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
I L + V CG H+ + G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
+ QVSCG H+ A+S + ++ +W G +S GQL G+ PS+
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQ 169
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 32/361 (8%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + L P+ ++ L
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
A G + + +GRV+ G + + L + ++P L+ SE E+ C
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H VLTS E+YTWG NG LG G + P V+ + V +SCG T
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEA-LKDRHVKSISCGSNFTTC 595
Query: 356 I 356
I
Sbjct: 596 I 596
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 33/248 (13%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G ++ +GD + + L G P +S +V+ CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
T+G G LG G + L P+ V+ S +V+CG H+AAI E
Sbjct: 386 TFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQTGANVMSK 444
Query: 360 KILTWGWG 367
K+ TWG G
Sbjct: 445 KLYTWGDG 452
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ + P + LEGV++ A G HS + E G+V +G ++
Sbjct: 299 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 351
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
+ + P+ I L + V GG + +T GGEL+ WG+ ++ LG+ G ++ +P
Sbjct: 352 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411
Query: 333 RVQ 335
V
Sbjct: 412 EVN 414
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 130/322 (40%), Gaps = 82/322 (25%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPT------------------KVECLSGIFTKQAAL 184
+L+ WG+ ++GQLG G + ++ P P +++ S F +
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI------------------LGFLRS--- 223
G S +T G + WG G GRLG GQE+S+ LG L S
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL 167
Query: 224 ----------------------TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
T E PR + + K+ A H+A I E+G +Y+
Sbjct: 168 THQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYM 227
Query: 262 FGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWG 313
+G D EG PS + L V CGG+ T LT G+L+ WG
Sbjct: 228 WGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWG 287
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
+N N LG G D L E + P E + Q++CG H+ A++ EGK+L+WG GG HG
Sbjct: 288 ANSNYELGRG--DNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGG-HG 344
Query: 372 TFSEDGHSSGGQLDRGQLTPSE 393
G R Q P+E
Sbjct: 345 QL-------GSSSLRNQKVPTE 359
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG SL ++ P A + +A GG+ + +T+ G ++ G Q
Sbjct: 338 WGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQ 397
Query: 103 LGISENIGYSLEPLRISGLKKE-------VVQISTGYHHS 135
LG+ P+ ++ L +E V+ IS G H+
Sbjct: 398 LGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHA 437
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 152/293 (51%), Gaps = 24/293 (8%)
Query: 22 SKLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALAC 78
+KL +C R + T A GNG+ G+LGLG E R + S F +H +K LA
Sbjct: 106 TKLAVCGRNHTLVYTENGNMYAAGGNGE-GQLGLGDTEERTTFHLISFFTNQHKIKQLAA 164
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G + +TE G ++ G N GQ+G+++ S+ P ++ + K + IS GY+HS+ I
Sbjct: 165 GSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSV-PCQVD-VGKPISSISCGYYHSAFI 222
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGG 196
T DGELY +G+ NG+LGL + K +P V GI K + A G E +V +T G
Sbjct: 223 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPV---LGIMEKVNKVACGGEHTVVLTETG 279
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V ++G G G+LGHG L TS P+ +K L K++ G H+A I EN
Sbjct: 280 -VYTFGLGQYGQLGHGT------LLFKTS--VPKSVKHLRKCKIRNITCGESHTAVIAEN 330
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHTCVLTS 305
G ++ FGD K+ E N A + P+L S L ++ +V CGG H V +
Sbjct: 331 GLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFAT 383
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 37/296 (12%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLGS + +P A + K CG HTL TE G +YA G N G
Sbjct: 75 MFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEG 134
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL
Sbjct: 135 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 192
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K + +P +V+ I + + G+ S +TG G++ ++G +G+LG E
Sbjct: 193 DKT--YVSVPCQVDVGKPISS--ISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 245
Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIF-----GDRAVDKMLF 272
L+++ P L I E KV A G H+ + E G VY F G +LF
Sbjct: 246 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 298
Query: 273 QEG-----NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ H R+ + + + CG HT V+ G ++T+G +G LG+G
Sbjct: 299 KTSVPKSVKHLRKCKIRN-------ITCGESHTAVIAENGLMFTFGDGRHGKLGLG 347
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 23/280 (8%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + V IS G H++ +T +G+LYM+G N GQLGLG
Sbjct: 34 FGKSNFAENI-----PSKFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 88
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + PT V+ L TK A G ++ T G + + G G G+LG G
Sbjct: 89 K--NTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTT 146
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S +T + K+K AAG SA + E+G+++++GD + ++ + +
Sbjct: 147 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVS 198
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGP 337
P + + CG YH+ +T GELYT+G ENG LG+ + +S P+ V G
Sbjct: 199 VPCQVDVGKPISSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGI 258
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTF 373
+ V++V+CG +HT ++E + T+G G HGT
Sbjct: 259 MEK--VNKVACGGEHTVVLTETGVYTFGLGQYGQLGHGTL 296
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 32/309 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
++CG HT +T G +Y G ND+GQLG+ S+N + +P + LK E +++ G +
Sbjct: 57 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVH--KPTCVKALKPEKTKLAVCGRN 114
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
H+ T +G +Y G N GQLGLG + T +S FT KQ A G
Sbjct: 115 HTLVYTENGNMYAAGGNGEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 168
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S AVT G++ WG G++G ++ Y + G + + G+
Sbjct: 169 SAAVTEDGQLFVWGDNSEGQIGLADKT-----------YVSVPCQVDVGKPISSISCGYY 217
Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
HSA I +G +Y FG+ K +L ++ ++R P ++ + +V CGG HT VLT
Sbjct: 218 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 277
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
G +YT+G + G LG G++ S + + + ++CG HTA I+E G + T+
Sbjct: 278 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFTF 336
Query: 365 GWGGSHGTF 373
G G HG
Sbjct: 337 G-DGRHGKL 344
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 152/340 (44%), Gaps = 30/340 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3145 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3203
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P +V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3204 ATQLKP--KQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3256
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3257 ----SEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3312
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3313 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3372
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
V++V+CG H+ A WG + + E+
Sbjct: 3373 -LDAVFVNRVACGSSHSIA----------WGLPNASLDEE 3401
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4151 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4208
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4209 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4267
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4268 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGD---- 4321
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4322 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4371
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 4372 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4429
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4430 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTWG 4468
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3138 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P +++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3198 LGHGDN-ATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3256
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3257 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3312
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3313 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3363
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3364 NKKPALVIGLDAVFVNRVACGSSHS 3388
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 132/292 (45%), Gaps = 18/292 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L LT G VYA G + G+LG + Y P + L V I+ G
Sbjct: 4237 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYD-RPKLVEHLNGMSVADIACGSA 4295
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4296 HSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLC 4353
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4354 ITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFSV 4404
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP ++ L + + G H + GE+
Sbjct: 4405 ALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEV 4464
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4465 YTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4515
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4257 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR 4316
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4317 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4375 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4431
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G VY +GD ++ +
Sbjct: 4432 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4484
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4485 RPRLVAALQGKHIVKVTCGSAHTLALST 4512
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 158/350 (45%), Gaps = 46/350 (13%)
Query: 42 LWGNGDYGRLG-----------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TET 89
+WG D +LG SR RP+ S GG+ +LF+ ++
Sbjct: 3031 VWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIS------------GGSKSLFIVSQD 3078
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G V+A G G+LG+ L P ++ L + VV+ + +G H+ A+T+DG+++
Sbjct: 3079 GKVFACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3137
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG+ +G+LG G + + P VE L + A G S A++ G++ +WG G
Sbjct: 3138 WGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEY 3195
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
GRLGHG + ++ P+ + L G +V A G + + E+G V+ +GD
Sbjct: 3196 GRLGHGDNA---------TQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3246
Query: 265 RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
K+ + P I +L ++ CG + LT GE++TWG + LG
Sbjct: 3247 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3306
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
G + P+ + G V V+ G H A+++ G++ WG HG
Sbjct: 3307 GGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG-DNDHG 3354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 135/314 (42%), Gaps = 42/314 (13%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ +K +AC + L L++ G +Y +LG E LEP I L +E +
Sbjct: 570 RFQVKQIACSESLLLLLSQDGKLYNC------RLGKPE-----LEPQPIEELAQETILSI 618
Query: 130 TGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQA 182
G+ H AI + Y WG + +LG G A+ +P TK+ C+ +F
Sbjct: 619 AGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP--TKISALDRCVKAVFC--- 673
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G S A+T G + +WG G GRLGHG S + P ++ L ++
Sbjct: 674 --GCSYSAAITWSGNLYTWGRGTYGRLGHGN---------SDDQCVPAIVMALAEYEIID 722
Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
A +G HS C+ G VY +GD K+ N + +P L+ LP + + G +
Sbjct: 723 VALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQRIFAGAQSS 782
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVSCGWKHTAAIS 357
LT+ G LY+WG + CLG ++ S R+ + V+ G H A++
Sbjct: 783 MALTTEGHLYSWG--KASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALT 840
Query: 358 E-GKILTWGWGGSH 370
G++ WG S
Sbjct: 841 SCGEVFGWGRNDSQ 854
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A ++ + AL G AH+L LT G VYA G D+
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V +I G S A+T +G LY WGK S ++
Sbjct: 750 GKLG-NGNCNSSLQPILVETLPR-VQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVER 807
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ + +P V L A+G +A+T G+V WG S ++
Sbjct: 808 SVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 16/229 (6%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R A WG G+ RLG G +R P SA ++ +KA+ CG +++ +T +G +Y G
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDR-CVKAVFCGCSYSAAITWSGNLYTWGR 692
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
+G+LG + + + ++ + E++ ++ +G HS +T +G +Y WG G+L
Sbjct: 693 GTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKL 752
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
G G + + PI VE L + ++ G + S+A+T G + SWG LGH Q E
Sbjct: 753 GNGNCNSSLQPI--LVETLPRV--QRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVE 806
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S+ G PRL+ L+ ++ A G H + G V+ +G
Sbjct: 807 RSVQGC------SVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 22/274 (8%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISE 107
RLG LE P + ++ ++A C G H L + Y+ G + +LG +
Sbjct: 596 RLGKPELE----PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ P +IS L + V + G +S+AIT G LY WG+ + G+LG G + +P
Sbjct: 652 THARAV-PTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPA 710
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
I G S+ +T G V +WG G G+LG+G +S L + E
Sbjct: 711 IVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPI--LVET 768
Query: 228 TPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
PR+ + G + +A G L+S G+ G + V++ + P L+S
Sbjct: 769 LPRVQRIFAGAQSSMALTTEGHLYSW-----GKASCLGHQQVERSV----QGCSVPRLVS 819
Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
L + +V G H LTS GE++ WG N++
Sbjct: 820 SLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDS 853
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT + +S + + G + V+ GKV + G
Sbjct: 3029 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGE 3086
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 3087 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3137
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P L+ L + +V CG H+ ++S GELYTWG E G
Sbjct: 3138 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG--GSHGTFS 374
LG G P++V + V QV+CG + T A++E G + +WG G G G
Sbjct: 3198 LGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3256
Query: 375 EDGHSSGGQLDR 386
+G ++ +++R
Sbjct: 3257 SEGSATPHEIER 3268
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 118/302 (39%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4148 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4205
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4206 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4265
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4266 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR 4316
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4317 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4376
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 4377 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 4431
Query: 385 DR 386
R
Sbjct: 4432 RR 4433
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG G+LG + S I TP + L ++ A G +
Sbjct: 4144 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4194
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+++ G + ++ + P+L+ L + V GG H LT+ GE+
Sbjct: 4195 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4254
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
Y WG E+G LG G+ P+ V+ S D ++CG H+AAI S G +LTWG G
Sbjct: 4255 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITSSGHVLTWGKG 4312
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 143/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + ++
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLG---------NNVNQ 221
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 222 LTP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPTHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PTHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T + C +F
Sbjct: 317 -SVVLPHLTHLSCTDDVF 333
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L TP+ ++ L G K+K + G
Sbjct: 32 NEALYVTEDDEVFVFGLNYSNCLGTGDNQSTL---------TPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ + G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNVNQLTP 224
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 161/367 (43%), Gaps = 52/367 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G YG L R P S + +ACG T FL ETG V+ G ND GQ
Sbjct: 16 FGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQ 75
Query: 103 LGISENIGYSLEPLRISGLKKEVVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GI L + + +++ I + G H +AI+ G LY +G NS GQLG G
Sbjct: 76 CGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG-- 133
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-------H-- 211
+ I PTK++ L+ + A + ++ +T G + ++G G+LG H
Sbjct: 134 STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVP 193
Query: 212 ----------------GQESSILGFLR-----------------STSEY--TPRLIK-EL 235
GQ +++ T +Y +P L+ L
Sbjct: 194 VPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPL 253
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
+ + V A G+ H+ + E+G VY FG ++ +H P+LI L ++ +V
Sbjct: 254 DSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQV 313
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG YHT VL+ G++Y +G N +G LG+G++ SP+ + + V +V+ G+ H+
Sbjct: 314 TCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQII-ASLRDKFVVKVASGFYHS 372
Query: 354 AAISEGK 360
++ K
Sbjct: 373 ICLTATK 379
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y +G+NS G+L + +P P + + A G EQ+ + G V + G
Sbjct: 14 YSFGQNSYGELCHNDTVDRTLPTP--ISFCHNVKILDVACGNEQTAFLFETGDVFTCGYN 71
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
SG+ G G S + + P L+ E + +A G H I +G +Y FG
Sbjct: 72 DSGQCGIGSTSRV-----QSLRLVPALVT--EDIAHIRSANGCEHLTAISRSGALYTFGF 124
Query: 265 RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ ++ N P+ I L + EV C +HT V+T G LY +G N+ G LGI
Sbjct: 125 NSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGI 184
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWG--GSHGT-FSEDGH 378
H P + F+ PV V+CG HT +++ G ++ +G G GT ++ D H
Sbjct: 185 DDGMDRHVPVPLTY-FNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYH 243
Query: 379 SSGGQL 384
+S L
Sbjct: 244 ASPSLL 249
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 149/354 (42%), Gaps = 39/354 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + +++ +ACG HT +T +G +Y G +++
Sbjct: 314 WGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNY 373
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P ++SG + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 374 GLLGHGSEVSHWI-PQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG 432
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
P +VE L G+ T + A G + A K+ +WG
Sbjct: 433 DHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGD 490
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG L P + L ++ A G + + GRVY G
Sbjct: 491 GDKGRLGHGDNEPRL---------VPECVAALMEERICQVACGNDLTVALTTAGRVYTMG 541
Query: 264 DRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A ++ N + P+ + + EEV CG YH VLTS E+YTWG NG L
Sbjct: 542 STAYGQLGSATAN-GKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 374
G G + ++P V + V V+CG K T I I W H S
Sbjct: 601 GHGDNNHRNTPTIVD-VLKDKQVKNVACGSKFTVVIC---IHKWVSSADHSVCS 650
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 160/340 (47%), Gaps = 42/340 (12%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENI 109
SL S+ ++ A E + +ACGG H + +T G +++ G G+L G+ ++
Sbjct: 271 SLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPI 167
+ +SG E+V + G +H+ A+T+ G+LY WG ++ G LG G + + IP
Sbjct: 331 SHPKIIDTLSGTNVELV--ACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQ 388
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+ + GI + G + VT G++ ++G G G LGHG TS +
Sbjct: 389 KVSGQ-MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDH--------ITSNF 439
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE---------------NGRVYIFGDRAVDKMLF 272
PR ++ L G++ A G H+A E + ++Y +GD DK
Sbjct: 440 -PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG--DKGRL 496
Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
G++ R P ++ L +V CG T LT+ G +YT GS G LG + +
Sbjct: 497 GHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANG- 555
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
P V+G + S V++V+CG H A + S+ ++ TWG G
Sbjct: 556 KLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKG 595
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 37/290 (12%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ----ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
++G ++ L+ L L+ VV I+ G H+ +T GE++ WG+ S G+LG
Sbjct: 264 NKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLG 323
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQE 214
G +A + P ++ LSG + A G + AVT G + +WG G G LGHG E
Sbjct: 324 HGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSE 381
Query: 215 SSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+ + ++EG++V + G H+A + G+++ FGD + +
Sbjct: 382 ---------VSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG 432
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLT---------------SGGELYTWGSNE 316
+ + P + L + +V CG +HT S +LYTWG +
Sbjct: 433 DHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGD 492
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G LG G + PE V E + QV+CG T A+ + G++ T G
Sbjct: 493 KGRLGHGDNEPRLVPECV-AALMEERICQVACGNDLTVALTTAGRVYTMG 541
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V A G H+ + G ++ +G+ + ++ P +I L
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG ++ G LG GS +V H P++V G V
Sbjct: 341 GTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGS-EVSHWIPQKVSGQMEGIRV 399
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G G+F GH
Sbjct: 400 SYISCGAWHTAVVTSAGQLFTFG----DGSFGALGH 431
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 139/292 (47%), Gaps = 34/292 (11%)
Query: 44 GNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
G G G LGLG+ + + PV+ + H GG H + LT G VY+
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHP------GGRHAMALTAEGKVYSW 235
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G D GQLG +GY L+P I LK KEV +I+ G HS A+ DG+++ WG SNG
Sbjct: 236 GCGDRGQLGHGNTLGY-LDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A++ +P K+ L+G A G ++AV G V SWG GG+G LG+G E
Sbjct: 295 LGHGNNLAQL--LPKKIMSLNGKHIMAVACGECYTIAV-AGDDVWSWGLGGNGELGYGVE 351
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S Y P I+ L + A G+ S + NG+V+ +G + D+
Sbjct: 352 MP--------SYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWG--SGDRFRLGL 401
Query: 275 GNHA--RRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
GN +P I K + VV +H + G++Y WGS E G +G
Sbjct: 402 GNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVG 453
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 14/227 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ P + + + +ACG H++ + G +++ G G
Sbjct: 235 WGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N+ L P +I L K ++ ++ G ++ A+ D +++ WG NG+LG G +
Sbjct: 295 LGHGNNLA-QLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGYGVEM 352
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+PTK+E L A G+ S AV+ GKV +WG+G RLG G E I+
Sbjct: 353 PSYY-MPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIV--- 408
Query: 222 RSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
PR I+ +L+G K+K A H+ IDENG+VYI+G + +
Sbjct: 409 ------KPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEI 449
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 23/234 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
E+Y+WG N L +K P+ P K + L + A G++ V+ G + +
Sbjct: 126 EVYVWGSKRNLLLAADEKN----PLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFAC 181
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G G LG G + PR I +L V V A G H+ + G+V
Sbjct: 182 GKGHMGCLGLGNCDDV---------NVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKV 232
Query: 260 YIFGDRAVDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
Y +G D+ GN P+LI +L E ++ CG H+ + S G++++WG
Sbjct: 233 YSWG--CGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDG 290
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
NG LG G+ P+++ + + V+CG +T A++ + +WG GG+
Sbjct: 291 SNGALGHGNNLAQLLPKKIMS-LNGKHIMAVACGECYTIAVAGDDVWSWGLGGN 343
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G LG G+ ++ P + + A+ACG +T+ + V++ GL G+
Sbjct: 287 WGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDD-VWSWGLGGNGE 345
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P +I L K + ++ GY S A++ +G+++ WG +LGLG +
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNE- 404
Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
KVI P +++ L G K+ ++A+ G+V WG+ G +G+ +++
Sbjct: 405 -KVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGNDEDA 458
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 255 ENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
E VY++G + + E N + L+ L S+ + CG V++ G ++
Sbjct: 123 EPSEVYVWGSKRNLLLAADEKNPLEPDKSKLLENLDPSD-IACGYDSLFVVSRNGGIFAC 181
Query: 313 GSNENGCLGIGSIDVLHSPERVQG--PFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
G GCLG+G+ D ++ P ++ P + V + G +H A++ EGK+ +WG G
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTV-AIHPGGRHAMALTAEGKVYSWGCG 238
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 149/335 (44%), Gaps = 40/335 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G LG G P V A ++ +ACG HTL L++ G V++ G G+
Sbjct: 212 WGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGR 271
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV---DGELYMWGKNSNGQLGLG 158
LG ++ P+RI GL+ + Q++ HS+A+ G L+ +G+N GQLG+
Sbjct: 272 LG-QGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIP 330
Query: 159 KKAAKVIPIPTKVECLSGIF---TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + + ++C+S + + A G S A+ G + WG SG+LG+G
Sbjct: 331 EDKL----LTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGN-- 384
Query: 216 SILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----- 267
TS P L++ +L V A G HSA I + GR++ GD
Sbjct: 385 -------YTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGA 437
Query: 268 -------DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
D + + R P+ + V CG HT V+T GGE++TWG + G L
Sbjct: 438 HLNDNQDDHVTYNVAVRVRVPTDFRCV----HVACGDSHTAVVTDGGEIFTWGRGKGGRL 493
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G G H P ++ V VSCG HTA
Sbjct: 494 GHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTAC 528
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 27/251 (10%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG+ +NG LG G+ + P VE L G ++ A G ++A++ G+V SWG
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEA--HPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWG 265
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DENGRV 259
+G GRLG G LR +TP I LE + + A HSA + + G +
Sbjct: 266 SGYGGRLGQGH-------LR--DRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGAL 316
Query: 260 YIFGDRAVDKMLFQEG----NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+ FG+ ++ E ++ + S +S+ S V CG +H+ L G L+ WG N
Sbjct: 317 FSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKIS-RVACGSFHSAALAEHGSLWLWGCN 375
Query: 316 ENGCLGIGSIDVLHSPERVQG--PFSESPVDQVSCGWKHTAAIS-EGKIL-----TWGWG 367
E+G LG G+ P ++ V +V+CG +H+A I+ +G++ T+G
Sbjct: 376 ESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQL 435
Query: 368 GSHGTFSEDGH 378
G+H ++D H
Sbjct: 436 GAHLNDNQDDH 446
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 137/311 (44%), Gaps = 41/311 (13%)
Query: 80 GAHTLFLTETGC-VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G T+ + E C +Y G G LG E+ + + + L K++ +++ G H+ A+
Sbjct: 196 GQATVHVKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLAL 255
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---G 195
+ DGE++ WG G+LG G + PI ++ L + Q A S AV
Sbjct: 256 SKDGEVFSWGSGYGGRLGQGHLRDRFTPI--RICGLESLNLTQVACNEFHSAAVCACSKQ 313
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G + S+G G+LG ++ + +++ S + K+ A G HSA + E
Sbjct: 314 GALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEH--------KISRVACGSFHSAALAE 365
Query: 256 NGRVYIFGDRAVDKM------------LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
+G ++++G ++ L + GN R +++ EV CG H+ +
Sbjct: 366 HGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVM-------EVACGDQHSAFI 418
Query: 304 TSGGELYTWGSNENGCLGIGSID------VLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
T G ++ G N G LG D + RV+ P V V+CG HTA ++
Sbjct: 419 TKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCV-HVACGDSHTAVVT 477
Query: 358 E-GKILTWGWG 367
+ G+I TWG G
Sbjct: 478 DGGEIFTWGRG 488
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLN 98
LWG + G+LG G+ S P + A ++ +ACG H+ F+T+ G ++ G N
Sbjct: 371 LWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN 430
Query: 99 DFGQLGI------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+GQLG +++ Y++ V ++ G H++ +T GE++ WG+
Sbjct: 431 TYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKG 490
Query: 153 GQLGLGKKAAKVIPIPTKV 171
G+LG G + +P ++
Sbjct: 491 GRLGHGDNLNRHLPTEIEI 509
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 93 GCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 151
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A +
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 209
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 210 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 260
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+G++V+ A G H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 320
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 321 TVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 19/294 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L++TE V+ G+N G LG + + ++EP R+ L K++ +S G H
Sbjct: 71 AGNEVLYVTENDEVFVLGMNCSGCLGTGD-VQSTIEPKRLDSLCGKKIACLSYGSGPHVV 129
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE+Y WG N+ QLG G ++P L + A G S+ +T G
Sbjct: 130 LATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN-LVNKKVIEVACGSHHSMVLTSDG 188
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + E
Sbjct: 189 EVYTWGYNNSGQVGSGS---------TANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE 239
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 240 NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG 299
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 365
+N G LG G+ P V + ++ +C HT+A G++ WG
Sbjct: 300 ANSYGQLGTGNKSNQSYPTTVTVD-KDRVIEIAACHSAHTSAAKTQSGQVYMWG 352
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
VT +V G SG LG G ++ST E P+ + L G K+ + G H
Sbjct: 78 VTENDEVFVLGMNCSGCLGTGD-------VQSTIE--PKRLDSLCGKKIACLSYGSGPHV 128
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
E G VY +G A ++ NH P +S ++ EV CG +H+ VLTS G
Sbjct: 129 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 188
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
E+YTWG N +G +G GS P RV V ++CG + A+ E G++ WG+
Sbjct: 189 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY 248
Query: 367 GGS 369
G+
Sbjct: 249 NGN 251
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 245 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 304
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K V++I+ + H S+A T G++YMWG+ GQ
Sbjct: 305 QLGTGNKSNQSY-PTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 357
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 358 --SVVLPHLTHFACTDDVF 374
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 163/348 (46%), Gaps = 37/348 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-----KALACGGAHTLFLTETGCVYATGL 97
WG+ + +LG+ + R P V E SL ACG H+L L G V++ G
Sbjct: 5 WGDNSFRQLGINA-GRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGN 63
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N +GQLG +NI S P I L+ + VV +S G HS AI G +Y WG S GQLG
Sbjct: 64 NSYGQLG-RKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLG 122
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ K+ IP + LS Q + G S+A+T GKV SWG G+LG G
Sbjct: 123 I-KEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGT--- 178
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ +P+ + L+G+ + AAG HS + +G Y +G R + L G
Sbjct: 179 -----NFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWG-RNKEGQLALSGK 232
Query: 277 HARRPSLISKLPY-SEEVVCGGYHTCVLTSG-------------GELYTWGSNENGCLGI 322
+A S+ + + +E + C ++ G G++ T+GSN +G LG
Sbjct: 233 NASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQLGH 292
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGG 368
G I P+ V+ S Q++CG HT A + G++L++G G
Sbjct: 293 GLITKPRGPQIVE---SAELFSQIACGSHHTLAYACTSGQVLSFGCGS 337
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 34/298 (11%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYM 146
Y G N F QLGI N G P + + +++VQ + G HS + DG ++
Sbjct: 3 YCWGDNSFRQLGI--NAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWS 60
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQ LG+K K P ++ L + G E S+A+ G++ SWG+G
Sbjct: 61 CGNNSYGQ--LGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSR 118
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG + P+ I L K+ + G HS + ++G+V+ +GD
Sbjct: 119 GQLGIKEVKDQCSI--------PKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDND 170
Query: 267 VDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ F +R + + +P + +V GG H+ L+ G Y WG N+ G L +
Sbjct: 171 HGQLGLGTNFPSQASPQRVNSLDGIPLA-QVAAGGSHSFALSLSGTSYGWGRNKEGQLAL 229
Query: 323 G-------SID--VLHSPERVQGPFSES--PVDQVSCGWKHTAAISEGKILTWGWGGS 369
SI+ + H E + S S + + I++GK+LT+G S
Sbjct: 230 SGKNASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNS 287
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 228 TPRLIKELEGV-----KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+PR+++ EG ++ AA G HS + +G V+ G+ + ++ + ++RP+
Sbjct: 22 SPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPA 81
Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
I L V CG H+ + G +Y+WGS G LGI + S + S
Sbjct: 82 PIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSR 141
Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
+ QVSCG H+ A++ +GK+ +WG HG
Sbjct: 142 DKIIQVSCGHYHSIALTQDGKVFSWG-DNDHG 172
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 146/320 (45%), Gaps = 26/320 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
G + +G + ++ N + +P I L + CG HT VL G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
T+G N +G LG P ER+ G V Q+ CG HT A + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 366 WGGSHGTFSEDGHSSGGQLD 385
G S + + G D
Sbjct: 314 HGPSDTSKPTHPEALTGNFD 333
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 24/256 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 355 A-ISEGKILTWGWGGS 369
I +GK+ T+G S
Sbjct: 250 VLIQDGKVFTFGDNSS 265
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P + L + + G E + + GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK V+ IS G H++ + DG+++ +G NS+GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
I L + V CG H+ + G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
+ QVSCG H+ A+S + ++ +W G +S GQL G+ PS+
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQ 169
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4075 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4132
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +S+ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4133 GRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4191
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4192 GNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4245
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4246 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4295
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 4296 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4353
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4354 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTWG 4392
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 142/317 (44%), Gaps = 16/317 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ I+ G HS+AI+ GELY WG G+LG G
Sbjct: 3030 KLGHGNRTTLD-KPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3088
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ P C S + Q++A+T G V SWG G G+LG G
Sbjct: 3089 ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG------- 3141
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S TP I+ L G+ V G S + G V+ +G ++ H R+
Sbjct: 3142 --SEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK 3199
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P I+ L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3200 PQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-L 3258
Query: 339 SESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 3259 DAVFVNRVACGSSHSMA 3275
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4161 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMS--VADIACGS 4218
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4219 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4276
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4277 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4327
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4328 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4387
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4388 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4439
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3023 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3082
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3083 LGHGDN-ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3141
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3142 SEGSA--TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3197
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3198 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3248
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3249 NKKPALVIGLDAVFVNRVACGSSHS 3273
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 141/294 (47%), Gaps = 41/294 (13%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFVVSQ---------- 2962
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG+++ G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PRL++ L K++ A G HSA I G
Sbjct: 3021 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3071
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
+Y +G ++ + +P L++ L S +V CG T LT G +++WG
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGD 3131
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+ G LG G + +P ++ S V Q+ CG + + A++ G++ TWG G
Sbjct: 3132 GDFGKLGRGGSEGSATPHEIER-LSGIGVVQIECGAQFSLALTRAGEVWTWGKG 3184
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4181 WGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4240
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4241 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4298
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4299 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4355
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G VY +GD ++ +
Sbjct: 4356 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4408
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4409 RPRLVAALQGKHIVKVTCGSAHTLALST 4436
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G + + P + A + H + AL G AHTL LT G VYA G D+
Sbjct: 716 WGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY 775
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL+PL I L + V ++ G S A+T +G+LY WGK S L ++
Sbjct: 776 GKLG-NASCNSSLQPLLIECLPR-VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVER 833
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +P + L A+G +A++ G++ WG + ++
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 132/318 (41%), Gaps = 34/318 (10%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S RP K +K +AC L L++ G +Y ++ +PL
Sbjct: 582 STQRPPPALLNCKFHVKQVACSKDIVLLLSKEGKLYNWHIS---------KPDTEPQPLD 632
Query: 118 ISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ E IS H H A+ + Y WG N +LG G ++ +PTK+E
Sbjct: 633 FGDIGSETF-ISIASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSR--ELPTKIES 689
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L K G S A+T G + +WG G GRLGHG S + P ++
Sbjct: 690 LVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGI---------SDDQCLPTMVM 739
Query: 234 ELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
L+ +V A +G H+ C+ G VY +GD K+ N + +P LI LP +
Sbjct: 740 ALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ 799
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVSC 348
V G + LT G+LY+WG + CLG ++ S R+ + V+
Sbjct: 800 RVFAGSQFSLALTGEGQLYSWG--KASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAV 857
Query: 349 GWKHTAAISE-GKILTWG 365
G H A+S G+I WG
Sbjct: 858 GVTHCLALSSAGEIFGWG 875
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 23/269 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
C G H L + Y+ G D +LG + L P +I L + V + G +S+A
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSREL-PTKIESLVRRVKSVYCGCSYSAA 706
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT+ G LY WG+ + G+LG G + +P T V L ALG ++ +T
Sbjct: 707 ITLRGNLYTWGRGNYGRLGHGISDDQCLP--TMVMALKDHQVVDVALGSGDAHTLCLTNE 764
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G G+LG+ +S L L E PR+ + G + +A G
Sbjct: 765 GLVYAWGDGDYGKLGNASCNSSLQPL--LIECLPRVQRVFAGSQFSLALTG--------- 813
Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
G++Y +G + +++ + P LI+ L + +V G H L+S GE++
Sbjct: 814 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFG 873
Query: 312 WGSNENGCLGIGSI---DVLHSPERVQGP 337
WG N+N + S+ +L P V P
Sbjct: 874 WGRNDNQQICPASVCSEPLLRQPILVTLP 902
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G SR P + + +K++ CG +++ +T G +Y G ++G+
Sbjct: 665 WGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGCSYSAAITLRGNLYTWGRGNYGR 723
Query: 103 L--GISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
L GIS++ P + LK +VV ++ +G H+ +T +G +Y WG G+LG
Sbjct: 724 LGHGISDD---QCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESS 216
+ + P+ +ECL + ++ G + S+A+TG G++ SWG LGH E +
Sbjct: 781 ASCNSSLQPL--LIECLPRV--QRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERN 834
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G PRLI L+ ++ A G H + G ++ +G
Sbjct: 835 VQGC------SVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWG 875
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 21/261 (8%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+ V + +WG N QLG G K +KV +PT + +S + A G + V+
Sbjct: 2905 SAEQDVPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFVVSQ 2962
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSAC 252
GKV + G G +GRLG G ++ P + L VK A +G H+
Sbjct: 2963 DGKVFACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALA 3013
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ +G+V+ +G+ K+ +P L+ L + ++ CG H+ ++S GELY
Sbjct: 3014 LTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELY 3073
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG 367
TWG E G LG G P+ V S V QV+CG + T A++E G + +WG G
Sbjct: 3074 TWGLGEYGRLGHGDNATQLKPKLVTA-LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132
Query: 368 --GSHGTFSEDGHSSGGQLDR 386
G G +G ++ +++R
Sbjct: 3133 DFGKLGRGGSEGSATPHEIER 3153
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS---------------------------- 175
+Y WG N GQLG G + ++ I PT E LS
Sbjct: 4072 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4129
Query: 176 ------------------------GIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
+F K+ A+ G + +A+T G+V +WG G G+L
Sbjct: 4130 GSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4189
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG L + R P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4190 GHGNR---LSYDR------PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4240
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4241 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4300
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 4301 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 4355
Query: 385 DR 386
R
Sbjct: 4356 RR 4357
>gi|326444459|ref|ZP_08219193.1| regulator of chromosome condensation, rcc1 [Streptomyces
clavuligerus ATCC 27064]
Length = 416
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 34/358 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
WG G+LG ++ R+ P A K ++ LA G T + L V+ G
Sbjct: 44 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 103
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
ND GQLG P R+ GL + Q++ G H+ A+ +G+ ++ WG N +
Sbjct: 104 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 162
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG K +P+P V+ L+G T A G E S+A+ GG +++WG G+LG+
Sbjct: 163 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 220
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
L ST P +K L V+I AAG S +G + +G+ ++
Sbjct: 221 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 270
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ ++ P ++ LP +E +V GG H+ L S +Y WGSN+ G L G+I+
Sbjct: 271 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 326
Query: 331 PERVQGPFSESP-VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQ 383
P S+ P V ++ G + A+++G GWG G G+ + D H+ GQ
Sbjct: 327 PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHTLVGQ 384
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
A+ D + WG N GQLG + P P + L +Q A G + + V
Sbjct: 34 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 91
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ V +WG G+LG G L + + P + L G+ AAG LH+
Sbjct: 92 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 141
Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
+ NG V+ +G D + Q G+ P + +P + V G H
Sbjct: 142 LALRNNGDPQDGVWAWG----DNIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 196
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
+ L GG L WG+N+ G LG +I + P V+ SPV +++ G + A +++
Sbjct: 197 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVKN--LTSPVVEIAAGCNFSLARLAD 254
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRGQ----LTP 391
G I WG E+GH G+L GQ LTP
Sbjct: 255 GTIKAWG---------ENGH---GELGNGQTANSLTP 279
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 170/360 (47%), Gaps = 28/360 (7%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK D+ L G + + R F ++G+ ++G+LGLGS + +P A +
Sbjct: 29 SKFWLKNDVPLKIACGDEHTALITKNGRLF--MFGSNNWGQLGLGSKRTVNKPTCVKALK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
+ +ACG HTL T G V+++G N GQLG+ E + RI
Sbjct: 87 TEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ----RIHAFDSLGP 142
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V ++ G + S+A+T G+L+MWG N+ GQ+GL K++ P P +V+ I +
Sbjct: 143 VKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESH--APSPQEVDVGGPI--SWVSC 198
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ S VT G + ++G SG+LG E + P+++K ++ ++A
Sbjct: 199 GYYHSAFVTADGALYTFGECDSGKLGLTTE-------QLPRHRVPQMVKSIKEPVTQVAC 251
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G H+ + E R++ FG ++ F + RP K +V CG HT
Sbjct: 252 GGG-HTVALTEE-RLFTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTA 309
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGK 360
V+T GG LYT+G +G LG+G + + V F + V +CG H ++ +
Sbjct: 310 VITDGGLLYTFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVLARPR 369
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 148/296 (50%), Gaps = 32/296 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ ETG V+ FG+ ++NI LK +V ++I+ G H++ IT +G L
Sbjct: 9 IPETGAVFT-----FGKSKFADNIPSKF------WLKNDVPLKIACGDEHTALITKNGRL 57
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+M+G N+ GQLGLG K + + PT V+ L A G ++ T GKV S G
Sbjct: 58 FMFGSNNWGQLGLGSK--RTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGN 115
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G F R I + + VK+ AAG SA + E+G+++++G
Sbjct: 116 SEGQLGLGDCEERTTFQR---------IHAFDSLGPVKMLAAGSNTSAALTESGKLFMWG 166
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
D ++ + +HA P + V CG YH+ +T+ G LYT+G ++G LG+
Sbjct: 167 DNTEGQIGLAKESHAPSPQEVDVGGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLT 226
Query: 324 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTF 373
+ + P+ V+ + PV QV+CG HT A++E ++ T+G G HGTF
Sbjct: 227 TEQLPRHRVPQMVKS--IKEPVTQVACGGGHTVALTEERLFTFGLGQFGQLGHGTF 280
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 22/302 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
+ACG HT +T+ G ++ G N++GQLG+ + +P + LK E V+ ++ G +H
Sbjct: 41 IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVN-KPTCVKALKTEKVLLVACGRNH 99
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVT 193
+ T G+++ G NS GQLGLG + ++ + K A G S A+T
Sbjct: 100 TLICTAQGKVFSSGGNSEGQLGLGDCEERTTF--QRIHAFDSLGPVKMLAAGSNTSAALT 157
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GK+ WG G++G +ES + P + G + + G+ HSA +
Sbjct: 158 ESGKLFMWGDNTEGQIGLAKES-----------HAPSPQEVDVGGPISWVSCGYYHSAFV 206
Query: 254 DENGRVYIFGDRAVDKM--LFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGEL 309
+G +Y FG+ K+ ++ R P ++ K P ++ V CGG HT LT L
Sbjct: 207 TADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEPVTQ-VACGGGHTVALTEE-RL 264
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
+T+G + G LG G+ R F + V QV+CG HTA I++G +L G
Sbjct: 265 FTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGR 324
Query: 370 HG 371
HG
Sbjct: 325 HG 326
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G A H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LHS C+++
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG G+ + L SP V E V+ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVLVE-KERVVEIAA 291
Query: 348 CGWKHTAA--ISEGKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSAHTSAAKTQSGNVYMWG 311
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA ++G VY++G
Sbjct: 276 --------PAHVLVEKERV-VEIAACHSAHTSAAKTQSGNVYMWG 311
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGMNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 FL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SAPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V++ G N +GQLG +
Sbjct: 76 GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
I + L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQA- 193
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
IP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 194 -IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G++ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G ++ P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQAI-PRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 64 VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+CS E ++ AC G L+ T ++ G N G LG+ + + +LEP R+
Sbjct: 36 LCSEEELQVIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGD-VQSTLEPRRLD 93
Query: 120 GL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L K++ +S G H T +GE++ WG N+ GQLG G ++P LS
Sbjct: 94 SLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTN-LSNK 152
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 153 QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQAIPRRVTGCLQ 203
Query: 238 VKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
KV + A G + S + + G VY++G ++ + P ++ L + V
Sbjct: 204 NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CG HT VLT G++Y WG+N G LG G+ P V + ++ +C HT+
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSTHTS 322
Query: 355 AISE--GKILTWG 365
A G + WG
Sbjct: 323 AAKTQGGHVYMWG 335
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG LG ++ST E PR + L K+ + G H
Sbjct: 62 TVNDEIFVLGTNCSGCLG-------LGDVQSTLE--PRRLDSLSDKKIACLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
G V+ +G A ++ NH PS IS ++ EV CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 341 --SVTLPHLTHFSCTDDVF 357
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4036 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4094
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT GELY WGK G+LG G ++ P VE
Sbjct: 4095 PRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKP--KLVEA 4152
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4153 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4203
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L GV V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4204 IDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4263
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4264 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4322
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4323 SAHTLAWSTSK 4333
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4076 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGR 4135
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4136 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4194 -GSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4250
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4251 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4303
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4304 RPRLVAALQGKKINRVACGSAHT 4326
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 36/298 (12%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ T +++ G D G+LG + + EP +S L K+V+ I+ G +
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHGDTVSLE-EPKLVSALSGKQTGKQVIHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT DGELY WG+ + G+LG G + +P+ V L G+ + G Q+++V
Sbjct: 563 SAAITADGELYTWGRGNYGRLGHGSSEDQTVPM--LVTGLKGLKVVDVSCGSGDAQTLSV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
I ++G+VY +G ++ H R P +++ L + +V G H LT GE+Y
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVY 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGW 366
+WGSN+ C ++ + PV V G KH IS G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRI------------AKPVPSVLPGLDSKHIVGISCGPAQSFAW 776
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3970 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4027
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4028 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4085
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G A G S +T G++ +WG G GRLGHG
Sbjct: 4086 HGNRSP--CDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGD--- 4140
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4141 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4254
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4255 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4287
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 149/316 (47%), Gaps = 35/316 (11%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + +AC L L+ G +Y N+ +L P + GL
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN-----------NTLGPQLVQGL 490
Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ +V+I+ H A++ EL+ WG G+LG G + + P V LSG
Sbjct: 491 ASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVS--LEEPKLVSALSGKQ 548
Query: 179 T-KQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
T KQ A G S A+T G++ +WG G GRLGHG S + P L+
Sbjct: 549 TGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTVPMLVTG 599
Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL +
Sbjct: 600 LKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 659
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG + +T G++Y+WG +N LG G+ + + P+ + G + VD V+ G
Sbjct: 660 VKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVD-VAVGS 718
Query: 351 KHTAAISE-GKILTWG 365
H A++E G++ +WG
Sbjct: 719 THCLALTESGEVYSWG 734
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G S P + SA K + K +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRG 578
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
++G+LG + ++ P+ ++GLK +VV +S +G + ++T +G+++ WG G+L
Sbjct: 579 NYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKL 637
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 GRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEE 695
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+++ L+G KV A G H + E+G VY +G
Sbjct: 696 HV---------RYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWG 734
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHATAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 20/252 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGI 322
TW ++ CL +
Sbjct: 3232 TWXXTKH-CLAV 3242
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 143/329 (43%), Gaps = 32/329 (9%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ + + + F N
Sbjct: 3194 -----SEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXN 3248
Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCV---------LTSGGELYTWGSNENGCLGIGSID 326
+ LI V+ G Y TC + ++Y WG N++G G G+
Sbjct: 3249 YLLELFLIKV--SVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTT 3306
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAA 355
V P V G + +V+CG H+ A
Sbjct: 3307 VNRKPTLVHG-LEGQKITRVACGSSHSVA 3334
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 121/303 (39%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4023
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4024 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4083
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G +V AAG HSACI G +Y +G
Sbjct: 4084 LGHGNRSPC---------DRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYG 4134
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4135 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4195 SDGCKVPMKIDS-LTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4249
Query: 384 LDR 386
+ R
Sbjct: 4250 VRR 4252
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNTT-QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++ IP +E L+G Q G + S+A+T G V +W
Sbjct: 3193 -GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ +T+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQR 688
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
LG E++ Y P ++GL+ K+VV ++ G H A+T GE+Y WG N Q L
Sbjct: 689 LGHGTEEHVRY---PKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTL 745
Query: 156 GLGKKAAKVIP 166
+ K V+P
Sbjct: 746 RIAKPVPSVLP 756
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4234 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4293
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4294 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4328
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + + +A G H L LTE+G VY+ G ND
Sbjct: 681 WGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ 740
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ + P + GL K +V IS G S A
Sbjct: 741 HFDTLRIAKPV-----PSVLPGLDSKHIVGISCGPAQSFA 775
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 146/320 (45%), Gaps = 26/320 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
G + +G + ++ N + +P I L + CG HT VL G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
T+G N +G LG P ER+ G V Q+ CG HT A + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 366 WGGSHGTFSEDGHSSGGQLD 385
G S + + G D
Sbjct: 314 HGPSDKSKPTHPEALTGNFD 333
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 24/256 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 355 A-ISEGKILTWGWGGS 369
I +GK+ T+G S
Sbjct: 250 VLIQDGKVFTFGDNSS 265
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
I L + V CG H+ + G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
+ QVSCG H+ A+S + ++ +W G +S GQL G+ PS+
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQ 169
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 145/319 (45%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 790 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 850 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 908
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 909 ATQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 961
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 962 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 1017
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 1018 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 1077
Query: 337 PFSESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 1078 -LDAVFVNRVACGSSHSIA 1095
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 1802 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 1859
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 1860 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 1918
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 1919 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 1972
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 1973 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 2022
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 2023 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 2080
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 2081 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWG 2119
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 1888 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 1945
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 1946 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 2003
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 2004 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 2054
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 2055 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 2114
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 2115 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 2166
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 843 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 903 LGHGDN-ATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 961
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 962 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 1017
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 1018 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 1068
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 1069 NKKPALVIGLDAVFVNRVACGSSHS 1093
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 15/267 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 1908 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ L + L + I+ +G + IT D ++ WG G+LG G
Sbjct: 1968 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-- 2025
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 2026 GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV--- 2082
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ + L+G K+ A G LH ++G VY +GD ++ +R
Sbjct: 2083 ------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQR 2136
Query: 281 PSLISKL--PYSEEVVCGGYHTCVLTS 305
P L++ L + +V CG HT L++
Sbjct: 2137 PRLVAALQGKHIVKVTCGSAHTLALST 2163
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 22/296 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 772 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 830
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 831 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 888
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 889 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVTALAGRRVVQVACGSRDAQTLA 939
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 940 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 999
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 1000 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG 1054
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT + +S + A G + V+ GKV + G
Sbjct: 734 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 791
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 792 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 842
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P L+ L + +V CG H+ ++S GELYTWG E G
Sbjct: 843 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG--GSHGTFS 374
LG G P+ V + V QV+CG + T A++E G + +WG G G G
Sbjct: 903 LGHGDNATQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 961
Query: 375 EDGHSSGGQLDR 386
+G + +++R
Sbjct: 962 SEGSDTPHEIER 973
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 118/302 (39%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 1799 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 1856
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 1857 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 1916
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 1917 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 1968 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 2027
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 2028 DGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 2082
Query: 385 DR 386
R
Sbjct: 2083 RR 2084
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 146/320 (45%), Gaps = 26/320 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
G + +G + ++ N + +P I L + CG HT VL G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258
Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
T+G N +G LG P ER+ G V Q+ CG HT A + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313
Query: 366 WGGSHGTFSEDGHSSGGQLD 385
G S + + G D
Sbjct: 314 HGPSDKSKPTHPEALTGNFD 333
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 24/256 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 355 A-ISEGKILTWGWGGS 369
I +GK+ T+G S
Sbjct: 250 VLIQDGKVFTFGDNSS 265
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ E R + G ++ AA+G HS + N RV GD + ++ + P
Sbjct: 8 DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67
Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
I L + V CG H+ + G ++ WG+ G LGIG ++ +P+++ +
Sbjct: 68 PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126
Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
+ QVSCG H+ A+S + ++ +W G +S GQL G+ PS+
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQ 169
>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
Length = 5016
Score = 116 bits (290), Expect = 2e-23, Method: Composition-based stats.
Identities = 99/368 (26%), Positives = 156/368 (42%), Gaps = 48/368 (13%)
Query: 27 CKRWISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKH------SLKALAC 78
C +++ Q R L WG G LG G++ S P + F H S+ ++C
Sbjct: 180 CHFSVAAVAQPRGTTLLAWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIAHVSC 239
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGIS--------ENIGYSLEPLR-----------IS 119
G H +T ++ G N +GQLG+ E + ++L L +
Sbjct: 240 GKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQ 299
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP----IPTKVECLS 175
V ++ G H+ +T ++ G N GQLGLG + + P VE L
Sbjct: 300 HGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESLR 359
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G S V G V +WG G GRLG G+ LG + P L++E
Sbjct: 360 DQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGK----LGEGVAVPTLIP-LLRE- 413
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SE 291
++ + G H A I ++ +YI+G ++ ++ +P L++ P E
Sbjct: 414 ASIRARTVRCGARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATPPLFAEGVE 473
Query: 292 EVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+V G +HT +TS G+ YTWG N +N L + H+P+ + P E V +VSCG
Sbjct: 474 DVALGEFHTTCVTSAGKAYTWGLNLRDNSAL----VASHHTPQAIDLPEKER-VRKVSCG 528
Query: 350 WKHTAAIS 357
W HT ++
Sbjct: 529 WTHTDIVT 536
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 130/313 (41%), Gaps = 55/313 (17%)
Query: 94 ATGLNDFGQLG-------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
A GLN G+LG ++ + + EPL I+ +S G HH + IT
Sbjct: 197 AWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIA-------HVSCGKHHVAVITG 249
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP---------IPTKVECLSGIFTKQ--------AA 183
L+ WG N GQLGLG +++ P + + L + T Q A
Sbjct: 250 QARLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVA 309
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G ++ VT ++L G +G+LG G RS TP ++ L +
Sbjct: 310 CGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSC---TPITVESLRDQSILDL 366
Query: 244 AAGFLHSACIDENGRVYIFG----DRAVDKMLFQEGNHARRPSLISKLP----YSEEVVC 295
AG HSAC+ NG VY +G R D L G P+LI L + V C
Sbjct: 367 GAGQNHSACVLSNGDVYTWGCGDDGRLGDGKL---GEGVAVPTLIPLLREASIRARTVRC 423
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP--FSESPVDQVSCGWKHT 353
G H V++ LY WG+N+ G LG P + P F+E V+ V+ G HT
Sbjct: 424 GARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATPPLFAEG-VEDVALGEFHT 482
Query: 354 AAI-SEGKILTWG 365
+ S GK TWG
Sbjct: 483 TCVTSAGKAYTWG 495
Score = 47.4 bits (111), Expect = 0.011, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 71/207 (34%), Gaps = 60/207 (28%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+VA G +L+WG +G LG+G TS TP+++ L
Sbjct: 186 AVAQPRGTTLLAWGLNSNGELGNGT---------MTSSPTPQMVVTFP-----------L 225
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
H FQ R P I+ V CG +H V+T
Sbjct: 226 H----------------------FQ-----REPLSIA------HVSCGKHHVAVITGQAR 252
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
L+TWGSN+ G LG+G PE V + + + HT + G
Sbjct: 253 LFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVACGA 312
Query: 369 SHGTFSED-------GHSSGGQLDRGQ 388
+H F G++ GQL G
Sbjct: 313 AHTLFVTHQQQILGMGYNQAGQLGLGH 339
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 147/295 (49%), Gaps = 18/295 (6%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
S+ A+ACG H L ++ +G V++ G + GQLG+ S P ++ + Q++
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVAC 1821
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A+T G+++ WG NS+GQLGLGK+ V P + L+G+ Q A G S+
Sbjct: 1822 GNSHSLALTKGGDVFSWGLNSHGQLGLGKEVP-VQHTPVIICALAGVAVTQIAAGGTHSL 1880
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V GA G+LG + + + ++ L + V + G HS
Sbjct: 1881 FLTLADLVYCCGANKCGQLG-------VNRVDEKGRFNICMVPALRPLSVSFISCGESHS 1933
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
A + ++G+VY FGD + ++ + +P L++ L P S ++ CG +HT VL S G+
Sbjct: 1934 AVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGPAS-QIACGRHHTLVLGSSGQ 1992
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-----PVD-QVSCGWKHTAAIS 357
L+ +GS G G G D +P VQ P++ P D +++ GW A S
Sbjct: 1993 LWAFGSGAKGQTGNGHNDSCLTPTLVQFPWTTDDTAAMPSDLKIAAGWNTNFAYS 2047
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 150/341 (43%), Gaps = 43/341 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+ G + S V K + CG HTLFL G V + G N GQ
Sbjct: 1688 WGDSSSGQFGPQAAPSPVSWTVPGVITK-----ICCGDRHTLFLNADGNVLSCGHNSQGQ 1742
Query: 103 LGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG + I +E L VV ++ G H A++ G ++ WG +GQLGL
Sbjct: 1743 LGRQKKKNGKIIAQVEAL------GSVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLL 1796
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+KV I Q A G S+A+T GG V SWG G+LG G+E +
Sbjct: 1797 PTPSSS-HRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPV- 1854
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDK 269
++TP +I L GV V AAG HS + VY G +R +K
Sbjct: 1855 -------QHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEK 1907
Query: 270 MLFQEGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
F N P+L P S + CG H+ VLT G++YT+G G LG +
Sbjct: 1908 GRF---NICMVPAL---RPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANE 1961
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
P+ V G + P Q++CG HT + S G++ +G G
Sbjct: 1962 VKPKLVAG--LDGPASQIACGRHHTLVLGSSGQLWAFGSGA 2000
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 63/331 (19%)
Query: 44 GNGDYGRLGLGS----LESRWRPVVCS-AFEKHSLKA-LACGGAHTLFLT-----ETGC- 91
NG Y L + S L + R +CS E +KA L G + ++T E GC
Sbjct: 1548 SNGSYALLSIDSGAINLLNLSRVTLCSFKVEGPVIKACLDKTGRYVAYITTPSGLEDGCD 1607
Query: 92 --VYATGLNDFGQLGISENIG---YSLEPLRISGLKKEVVQI-----STGYHHSSAITVD 141
++A + +L E +G S PL + ++ V + S G ++ S +TVD
Sbjct: 1608 CYLHARPILQVMRLSDGERLGAVHLSKNPLALVICEQHCVFVGFGDGSVGVYYISDVTVD 1667
Query: 142 GE---------------LYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ L+ WG +S+GQ G +AA P+ V + G+ TK G
Sbjct: 1668 EDEPIRCWEDPSGGDMQLFCWGDSSSGQ--FGPQAA-----PSPVSWTVPGVITK-ICCG 1719
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-A 244
++ + G VLS G G+LG ++ + ++I ++E + +A A
Sbjct: 1720 DRHTLFLNADGNVLSCGHNSQGQLGRQKKKN------------GKIIAQVEALGSVVAMA 1767
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLI--SKLPYSEEVVCGGYHTC 301
G H + +G V+ +G ++ L + + RPS + +V CG H+
Sbjct: 1768 CGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSL 1827
Query: 302 VLTSGGELYTWGSNENGCLGIG-SIDVLHSP 331
LT GG++++WG N +G LG+G + V H+P
Sbjct: 1828 ALTKGGDVFSWGLNSHGQLGLGKEVPVQHTP 1858
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G ++ WG SG+ G S + + + GV KI G H+ +
Sbjct: 1681 GDMQLFCWGDSSSGQFGPQAAPSPVSW-------------TVPGVITKICC-GDRHTLFL 1726
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+ +G V G + ++ Q+ + + + + L + CG H +++ G +++WG
Sbjct: 1727 NADGNVLSCGHNSQGQLGRQKKKNGKIIAQVEALGSVVAMACGQDHCLAVSASGHVFSWG 1786
Query: 314 SNENGCLG-IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ E+G LG + + H P +V P+ QV+CG H+ A+++ G + +WG SHG
Sbjct: 1787 AGEDGQLGLLPTPSSSHRPSKVPI-PLPIPIIQVACGNSHSLALTKGGDVFSWGL-NSHG 1844
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 29/292 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 58 MFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEG 117
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERTTFQL--VSFFTAQHKIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGLA 175
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++A +P E G + G+ S VT G++ ++G +G+LG L
Sbjct: 176 EEANVCVP----SEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKLG-------L 224
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
+ + P+L+ + G KV A G H+ + E VY FG + +F+
Sbjct: 225 SPEQLKNHRIPQLVLGIPG-KVNQVACGGGHTVALTEE-EVYTFGLGQFGQLGLGTFIFE 282
Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L + + CG HT +++ G +YT+G +G LG+G
Sbjct: 283 ----TSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLG 330
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 150/309 (48%), Gaps = 32/309 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ + +P + LK E V+I+ G +H
Sbjct: 40 LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKIAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T +G++Y G NS GQLGLG + T + +S FT KQ + G S
Sbjct: 99 TLVYTEEGKVYAAGGNSEGQLGLGDTEER-----TTFQLVS-FFTAQHKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G + WG G++G +E+++ SE T G + + G+ H
Sbjct: 153 AALTEDGVLFMWGDNSEGQIGLAEEANVC----VPSEVTI-------GKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + G +Y FG+ K+ Q NH R P L+ +P +V CGG HT LT
Sbjct: 202 SAFVTTEGELYTFGEPENGKLGLSPEQLKNH-RIPQLVLGIPGKVNQVACGGGHTVALTE 260
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
E+YT+G + G LG+G+ S +V + ++CG HTA IS+ G + T+
Sbjct: 261 E-EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTF 319
Query: 365 GWGGSHGTF 373
G G HG
Sbjct: 320 G-DGRHGKL 327
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 64/281 (22%)
Query: 23 KLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACG 79
K+ C R + T + + A GN + G+LGLG E R + S F +H +K L+ G
Sbjct: 90 KIAACGRNHTLVYTEEGKVYAAGGNSE-GQLGLGDTEERTTFQLVSFFTAQHKIKQLSAG 148
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
+ LTE G ++ G N GQ+G++E + P ++ + K + IS GY+HS+ +T
Sbjct: 149 SNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCV-PSEVT-IGKPISWISCGYYHSAFVT 206
Query: 140 VDGELYMWGKNSNGQLGLGKKAAK-------VIPIPTKVECLS----------------- 175
+GELY +G+ NG+LGL + K V+ IP KV ++
Sbjct: 207 TEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGKVNQVACGGGHTVALTEEEVYTF 266
Query: 176 ----------GIFTKQA-----------------ALGFEQSVAVTGGGKVLSWGAGGSGR 208
G F + A G + ++ G + ++G G G+
Sbjct: 267 GLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGK 326
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
LG GQE+ T+++ P L V++ A G H
Sbjct: 327 LGLGQEN-------FTNQFVPTLCSNFLKFIVRLVACGGCH 360
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F K ++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVF 364
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 152/335 (45%), Gaps = 31/335 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG GS E P + + ++ +ACG HT +T G +Y G ++
Sbjct: 101 WGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P RI+G + V +S G H++ IT G+L+ +G + G LG G
Sbjct: 161 GLLGHGKDVSHWI-PKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V G+ V
Sbjct: 278 RLGHGDKEPRL---------KPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGN-TV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
L + + P L+ ++ +V CG YH VLT E++TWG NG LG G I
Sbjct: 328 YGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDI 387
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+ P V+ + V ++CG TAAI + K
Sbjct: 388 EDRKIPTLVEA-LRDRSVRHIACGANFTAAICQHK 421
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 114/257 (44%), Gaps = 42/257 (16%)
Query: 142 GELYMWGK----NS--NGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ NS G + + + + P +E + G + S VT
Sbjct: 35 GDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTK 94
Query: 195 GGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG +E SI PRLI+ L V I A G H+ +
Sbjct: 95 NGEVFTWGEESGGRLGHGSREDSI----------HPRLIESLAVCNVDIVACGEFHTCAV 144
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTS 305
G +Y +GD + L G P I+ + Y V CG +HT ++T+
Sbjct: 145 TTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAY---VSCGTWHTALITT 201
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------- 358
G+L+T+G G LG G+ + + P+ V+ S V+CG HTAAI E
Sbjct: 202 MGQLFTFGDGTFGVLGHGNRESISCPKEVES-LSGLKTISVACGVWHTAAIVEVIVTQSS 260
Query: 359 -----GKILTWGWGGSH 370
GK+ TWG G H
Sbjct: 261 SSISSGKLFTWGDGDKH 277
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 120/276 (43%), Gaps = 44/276 (15%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L + + G HS+ +T +GE++ WG+ S G+LG G + + P +E
Sbjct: 69 KPLE-SNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI--HPRLIES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG++ S + P+
Sbjct: 126 LAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKD---------VSHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
I LEG+ V + G H+A I G+++ FGD F H R S+ P
Sbjct: 177 IAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGT-----FGVLGHGNRESI--SCPKE 229
Query: 291 EE---------VVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHS 330
E V CG +HT + G+L+TWG + LG G +
Sbjct: 230 VESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLK 289
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
P V + +++CG T + + GK+L+ G
Sbjct: 290 PTCV-ASLIDYDFHRIACGHSLTVGLTTSGKVLSMG 324
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 151/340 (44%), Gaps = 30/340 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 1950 KLGHGNRTTLD-KPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 2008
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2009 ATQLKP--KLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG----- 2061
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 2062 ----SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 2117
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 2118 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 2177
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
V++V+CG H+ A WG + T E+
Sbjct: 2178 -LDAVFVNRVACGSSHSIA----------WGLPNATLEEE 2206
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 164/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 2982 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 3039
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 3040 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 3098
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 3099 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 3152
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 3153 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 3202
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTW + LG GS+D
Sbjct: 3203 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVD 3260
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 3261 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWG 3299
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 3068 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 3125
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 3126 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 3183
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 3184 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 3234
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY + ++ +H RRP ++ L + + G H + GE
Sbjct: 3235 VALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 3294
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 3295 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 3346
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 1943 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2002
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 2003 LGHGDN-ATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG 2061
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2062 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2117
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 2118 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 2168
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 2169 NKKPALVIGLDAVFVNRVACGSSHS 2193
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 23/302 (7%)
Query: 79 GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ + G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 1872 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 1930
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 1931 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 1989 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALAGRRVIQVACGSRDAQTLA 2039
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 2040 LTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 2099
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 2100 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG-DND 2157
Query: 370 HG 371
HG
Sbjct: 2158 HG 2159
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + CG ++ LT++G VY DF +
Sbjct: 3194 WGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHR 3253
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + P +++ L+ K+++ I+TG H A + GE+Y WG N GQLG G
Sbjct: 3254 LG-HGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 3312
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
A I P V L G + G ++A++
Sbjct: 3313 A--IQRPRLVAALQGKHIVKVTCGSAHTLALS 3342
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 122/266 (45%), Gaps = 25/266 (9%)
Query: 134 HSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A +D +L +WG N QLG G K +KV +PT + +S + A G +
Sbjct: 1820 HGMAGALDQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSL 1877
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
V GKV + G G +GRLG G ++ P + L VK A +G
Sbjct: 1878 FIVGQNGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGG 1928
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+ ++S
Sbjct: 1929 KHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKIL 362
GELYTWG E G LG G P+ V + V QV+CG + T A++E G +
Sbjct: 1989 QGELYTWGLGEYGRLGHGDNATQLKPKLVAA-LAGRRVIQVACGSRDAQTLALTEDGSVF 2047
Query: 363 TWGWG--GSHGTFSEDGHSSGGQLDR 386
+WG G G G +G + +++R
Sbjct: 2048 SWGDGDFGKLGRGGSEGSDTPHEIER 2073
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 118/302 (39%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 2979 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 3036
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 3037 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 3096
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 3097 GHGNRMSY---------DRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 3147
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 3148 LGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 3207
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TW S G F GH S +
Sbjct: 3208 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTW----SKGDFHRLGHGSVDHV 3262
Query: 385 DR 386
R
Sbjct: 3263 RR 3264
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 155/334 (46%), Gaps = 45/334 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ R PV + L+ G HT+ L G V+A G N +GQ
Sbjct: 210 WGDNRYGQLGDGTTTQRAVPV--QVLNLSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQ 267
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +P+++ GL +V+ + G +HS A+ DG ++ WG N QLG G +
Sbjct: 268 LGDGTTTS-RFQPVQV-GL-SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS 324
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ + LSG T A G++ S+ + G V SWG G+LG G
Sbjct: 325 SRVPVQSG---LSGGVTLVA--GYKHSLVLRSDGTVWSWGDNVFGQLGDG---------- 369
Query: 223 STSEYTPRLIKELEGVKVKI-------AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ PR VKV ++G LHS +D NG V+ +GD ++ G
Sbjct: 370 ---TFNPR----SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQL----G 418
Query: 276 NHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
N SL++ L S V G HT VL + ++ WG NE+G LG G++ P
Sbjct: 419 NGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPV 478
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+V G S V VS G H+ A+ S G + WG
Sbjct: 479 QVAG---LSGVSAVSAGSYHSLALRSNGTVWAWG 509
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 146/296 (49%), Gaps = 22/296 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G+L R RPV + + A++ G H+L L G V+A G N +GQ
Sbjct: 458 WGVNEHGQLGDGTLTDRTRPVQVAGLS--GVSAVSAGSYHSLALRSNGTVWAWGFNRYGQ 515
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N L+P++++GL VV ++ G HS A+ DG ++ WG N +GQ+G G +
Sbjct: 516 LGDGTNTD-RLQPVQVAGLSG-VVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSW 573
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P V+ + + G S+A+ G V +WG GSG+LG G +
Sbjct: 574 RFLP----VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTA------- 622
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
++ P + L GV V + + + HS + +G V+ +G D L +G+ R
Sbjct: 623 -INKPAPVQVAGLSGV-VSLGSGNY-HSLGLRSDGTVWAWGFN-FDGQL-GDGSLLNRST 677
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P +S L VV G YH+ S G ++ WG N G LG G+ + P V G
Sbjct: 678 PVRVSGLSGVVSVVAGDYHSLARRSDGTVWAWGYNGEGQLGDGTRNDTLVPVWVLG 733
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 26/299 (8%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ S LA G H++ + G V+A G N GQLG + S P+R++ L VV ++
Sbjct: 35 RSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVD-SPTPVRVTNLSG-VVSVA 92
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G +HS ++ DG ++ WG N+ GQLG G +A P+P +V+ LSG+ + + GF
Sbjct: 93 SGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGS--GFSHG 148
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G V +WG + LG + +T P + L GV + + A G+ +
Sbjct: 149 LALRSDGTVWAWGD---------NRYNQLGNVGATRSNLPVQVPGLSGV-IAVVAGGY-Y 197
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGG 307
S + +G V+ +GD ++ +G +R P + L + G +HT L S G
Sbjct: 198 SLALRSDGTVWAWGDNRYGQL--GDGTTTQRAVPVQVLNLSGVMNLSAGSFHTVALRSDG 255
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
++ WG N G LG G+ P +V S V + G H+ A+ S+G + WG
Sbjct: 256 SVWAWGFNAYGQLGDGTTTSRFQPVQV----GLSDVLTLVAGNYHSLAVRSDGAVWAWG 310
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 152/326 (46%), Gaps = 28/326 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV + +L G +H L L G V+A G N + Q
Sbjct: 110 WGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167
Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N+G + P+++ GL + ++ GY +S A+ DG ++ WG N GQLG G
Sbjct: 168 LG---NVGATRSNLPVQVPGLSGVIAVVAGGY-YSLALRSDGTVWAWGDNRYGQLGDGTT 223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P+ +V LSG+ A G +VA+ G V +WG G+LG G
Sbjct: 224 TQRAVPV--QVLNLSGVMNLSA--GSFHTVALRSDGSVWAWGFNAYGQLGDGT------- 272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+TS + P + + V AG HS + +G V+ +GD ++ +R
Sbjct: 273 --TTSRFQPVQVGLSD---VLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRV 327
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
P + S L +V G H+ VL S G +++WG N G LG G+ + S +V S
Sbjct: 328 P-VQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVS-WLSL 385
Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
D VS G H+ + S G + WG
Sbjct: 386 GRAD-VSSGQLHSVVLDSNGAVWAWG 410
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 155/342 (45%), Gaps = 42/342 (12%)
Query: 43 WGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG +G+ S PV + A+ GG ++L L G V+A G N +G
Sbjct: 160 WGDNRYNQLGNVGATRSN-LPVQVPGLS--GVIAVVAGGYYSLALRSDGTVWAWGDNRYG 216
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + ++ L +SG V+ +S G H+ A+ DG ++ WG N+ GQLG G
Sbjct: 217 QLGDGTTTQRAVPVQVLNLSG----VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGT 272
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ LS + T A G S+AV G V +WG +LG G
Sbjct: 273 TTSRFQPVQVG---LSDVLTLVA--GNYHSLAVRSDGAVWAWGDNRYRQLGDGT------ 321
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+TS P GV + AG+ HS + +G V+ +GD ++ +G
Sbjct: 322 ---TTSSRVPVQSGLSGGVTL---VAGYKHSLVLRSDGTVWSWGDNVFGQL--GDGTFNP 373
Query: 280 RPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV 334
R S + K+ + +V G H+ VL S G ++ WG N +G LG G+ +D L V
Sbjct: 374 RSSAV-KVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSL-----V 427
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSE 375
P VS G+KHT + + W WG HG +
Sbjct: 428 AAPVGLGGSVAVSAGFKHTLVL-KADTTVWAWGVNEHGQLGD 468
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 158/331 (47%), Gaps = 31/331 (9%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG G+ L+S +V + A++ G HTL L V+A G+N+ G
Sbjct: 409 WGDNYSGQLGNGTGLDS----LVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHG 464
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + P++++GL V +S G +HS A+ +G ++ WG N GQLG G
Sbjct: 465 QLG-DGTLTDRTRPVQVAGLSG-VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNT 522
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ +V LSG+ A G S+A+ G V +WG G++G G S
Sbjct: 523 DRLQPV--QVAGLSGVVA--VAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSW----- 573
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ P ++ + V +AG HS + +G V+ +G ++ +G+ A
Sbjct: 574 ----RFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQL--GDGSTAINK 625
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P ++ L + G YH+ L S G ++ WG N +G LG GS+ +P RV G
Sbjct: 626 PAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPVRVSG-- 683
Query: 339 SESPVDQVSCGWKHT-AAISEGKILTWGWGG 368
S V V G H+ A S+G + WG+ G
Sbjct: 684 -LSGVVSVVAGDYHSLARRSDGTVWAWGYNG 713
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 145/324 (44%), Gaps = 25/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L PV + + ++A G H+L L+ G V+A G N GQ
Sbjct: 60 WGFNRQGQLGDGTLVDSPTPVRVTNLS--GVVSVASGDYHSLGLSSDGTVWAWGDNTAGQ 117
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+R+ L VV + +G+ H A+ DG ++ WG N Q LG A
Sbjct: 118 LG-NGTASASPVPVRVQNLSG-VVSLGSGFSHGLALRSDGTVWAWGDNRYNQ--LGNVGA 173
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V LSG+ A G S+A+ G V +WG G+LG G
Sbjct: 174 TRSNLPVQVPGLSGVIAVVA--GGYYSLALRSDGTVWAWGDNRYGQLGDGT--------- 222
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P + L G V +AG H+ + +G V+ +G A ++ +P
Sbjct: 223 TTQRAVPVQVLNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQPV 280
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L +V G YH+ + S G ++ WG N LG G+ P VQ S
Sbjct: 281 QVG-LSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVP--VQSGLSGGV 337
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
+ G+KH+ + S+G + +WG
Sbjct: 338 T--LVAGYKHSLVLRSDGTVWSWG 359
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 117/247 (47%), Gaps = 19/247 (7%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G + +++ G +HS + DG ++ WG N GQLG G P P +V LSG+ +
Sbjct: 33 GGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDS--PTPVRVTNLSGVVS 90
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G S+ ++ G V +WG +G+LG+G S+ P ++ L GV
Sbjct: 91 --VASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASA---------SPVPVRVQNLSGV- 138
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
V + + GF H + +G V+ +GD +++ + P + L VV GGY+
Sbjct: 139 VSLGS-GFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPGLSGVIAVVAGGYY 197
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
+ L S G ++ WG N G LG G+ P +V + S V +S G HT A+ S+
Sbjct: 198 SLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQV---LNLSGVMNLSAGSFHTVALRSD 254
Query: 359 GKILTWG 365
G + WG
Sbjct: 255 GSVWAWG 261
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 156/346 (45%), Gaps = 35/346 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R V ++ ++ G H++ L G V+A G N GQ
Sbjct: 358 WGDNVFGQLGDGTFNPR-SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQ 416
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + P+ + G V +S G+ H+ + D ++ WG N +GQLG G
Sbjct: 417 LGNGTGLDSLVAAPVGLGG----SVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLT 472
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ +V LSG+ A G S+A+ G V +WG G+LG G
Sbjct: 473 DRTRPV--QVAGLSGVSAVSA--GSYHSLALRSNGTVWAWGFNRYGQLGDGTN------- 521
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
T P + L GV AAG HS + +G V+ +G ++ +G+++ R
Sbjct: 522 --TDRLQPVQVAGLSGVVA--VAAGDSHSLALRSDGTVWAWGYNFDGQI--GDGSYSWRF 575
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P + L V GGYH+ L S G ++TWG N +G LG GS ++ P VQ
Sbjct: 576 LPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGST-AINKPAPVQ-VAG 633
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
S V + G H+ + S+G + WG F+ DG G L
Sbjct: 634 LSGVVSLGSGNYHSLGLRSDGTVWAWG-------FNFDGQLGDGSL 672
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P ++ + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 24/313 (7%)
Query: 64 VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+CS E S++ AC G L+ T ++ G N G LGI + I ++EP R++
Sbjct: 36 LCSEEELQSIRQ-ACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGD-IQSTIEPRRLN 93
Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L K++ +S G H T DGE++ WG N+ QLG G ++P LS
Sbjct: 94 SLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 152
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELE 236
+ A G S+ +T G+V +WG SG++G G + ++ PR + L+
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 203
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
V A G + S + + G VY++G ++ + P ++ L + V
Sbjct: 204 NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CG HT VLT G++Y WG+N G LG G+ P V + ++ +C HT+
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTS 322
Query: 355 AISE--GKILTWG 365
A G + WG
Sbjct: 323 AAKTQGGHVYMWG 335
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG +G ++ST E PR + L G K+ + G H
Sbjct: 62 TVDDEIFVLGTNCSGCLG-------IGDIQSTIE--PRRLNSLTGKKIASLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFCCTDDVF 357
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 152/320 (47%), Gaps = 41/320 (12%)
Query: 42 LWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG+ D G+LGLG E ++ PV F ++ +ACG H L + + G V+A G ND
Sbjct: 524 VWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 582
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG----------------E 143
GQLG+ + S EP ++ L+ + + + G +S+ IT +G +
Sbjct: 583 DGQLGLGV-LRPSFEPAAVTALR-QAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGD 640
Query: 144 LYMWGKNSNGQLGLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
L+ WG +G+LGLG+ A I P KV + +LG ++A+T G+ +WG
Sbjct: 641 LWTWGAAESGKLGLGEDVASGSILTPQKVPF--SVPVCACSLGTSHALAITARGECYAWG 698
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG GRLG G + + Y P +GV+++ AAG HS + +G ++I+
Sbjct: 699 AGYYGRLGIGT---------TANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIW 749
Query: 263 GDRAVDKMLFQEGNHAR---RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN---E 316
G + D N R + S +P + + +H+ +T GE++ WG N +
Sbjct: 750 GKKE-DTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQ 808
Query: 317 NGCLGIGSIDVLHSPERVQG 336
GC G + L PE + G
Sbjct: 809 TGC-GKRQAERLDRPEMIAG 827
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 170/412 (41%), Gaps = 84/412 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHS------------------LKALACGGAHT 83
WG G YG LG G + PV V EK S + A G H+
Sbjct: 205 WGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHS 264
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
+ T G ++ G G+LG+ N G SL P + L ++VV +S G HS+ I G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDVVFVSAGDSHSACIDRQG 323
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG G+LG G + IP+P KVE G+ Q A G ++A+T G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG + LG G++ P+ + ++E V V AAG HSA + G + ++
Sbjct: 382 AGLALGLGEGEDGG------GGMVTVPKHLSDIE-VAVLNVAAGPYHSAAVTVGGDLLVW 434
Query: 263 G-------------DRAVDKMLFQEGNHARRPSLISKL-------PYSEEVV-------- 294
G ++ K + N L S L YS+ V
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGA 494
Query: 295 -------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
CG HT LT G ++ WGSN+ G LG+G E V+ +
Sbjct: 495 GANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFST 554
Query: 342 PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
P+ +++CG KH A+++ G + W G + GQL G L PS
Sbjct: 555 PIRRIACGSKHCLAVAQYGDVFAW------------GANDDGQLGLGVLRPS 594
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 33/337 (9%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
+L++L CG HT+ LT TG V+ G ND GQLG+ E + EP+++ + +I+
Sbjct: 502 TLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIAC 561
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
G H A+ G+++ WG N +GQLGLG + A V + ++ G +
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITS 621
Query: 184 LGFEQSVAV-----TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
G Q+V++ T G + +WGA SG+LG G++ + S S TP+ + V
Sbjct: 622 NGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVA------SGSILTPQKVP--FSV 673
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCG 296
V + G H+ I G Y +G ++ +A P+ K V G
Sbjct: 674 PVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAG 733
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQVSCGWKHT 353
H+ L+ G+L+ WG E+ C S +SP +++ P V ++ H+
Sbjct: 734 ASHSLALSMDGDLWIWGKKEDTC----STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHS 789
Query: 354 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQL 389
A++E G++ WG + T G +LDR ++
Sbjct: 790 LAVTETGEVFAWGDNKLYQTGC--GKRQAERLDRPEM 824
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 164/387 (42%), Gaps = 76/387 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG+G +GRLG G P F + +ACG HTL LT G V+A GL
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G G P +S ++ V+ ++ G +HS+A+TV G+L +WG + +LG G +
Sbjct: 388 LGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447
Query: 161 AAKVIPIPTKVECLSG---IFTKQAALGFEQ----------------------------- 188
+ P P V L + Q+ LG +
Sbjct: 448 QNQ--PFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQS 505
Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+VA+TG G V WG+ G+LG G++ +Y P + + ++
Sbjct: 506 LGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQV-------EEDQYEPVKL-DCFSTPIR 557
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
A G H + + G V+ +G ++ + P+ ++ L + +V CG Y
Sbjct: 558 RIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSA 617
Query: 301 CVLTSG---------------GELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSES 341
C+ ++G G+L+TWG+ E+G LG+G DV + +P++V PFS
Sbjct: 618 CITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGE-DVASGSILTPQKV--PFS-V 673
Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWG 367
PV S G H AI+ G+ WG G
Sbjct: 674 PVCACSLGTSHALAITARGECYAWGAG 700
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 161/380 (42%), Gaps = 66/380 (17%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTET-----GCVYAT 95
WG LGLG +E+R R P + F +H + ++CG ++ L + G VY
Sbjct: 73 WGKNYNNVLGLG-VETRERVFPGLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTF 131
Query: 96 GLNDFGQLGISENIG---------------------YSLEPLRISGLKK-EVVQISTGYH 133
GL + G+LG ++ ++ +P R+ K ++ +IS G
Sbjct: 132 GLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGAD 191
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF------- 186
H+ A++ G LY WG S G LG G + P+ + G K+ LG
Sbjct: 192 HTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDP 251
Query: 187 ----------EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ S+A T G + +WG GG+GRLG G L +P ++ +
Sbjct: 252 VVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSL---------SPAVVDYIL 302
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEV 293
V +AG HSACID G +Y +G ++ + P + +P + V
Sbjct: 303 DRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQ-V 361
Query: 294 VCGGYHTCVLTSGGELYTWGS---NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
CG +HT LT G ++ WG+ G G ++ P+ + E V V+ G
Sbjct: 362 ACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSD--IEVAVLNVAAGP 419
Query: 351 KHTAAISEG-KILTWGWGGS 369
H+AA++ G +L WG GGS
Sbjct: 420 YHSAAVTVGGDLLVWGVGGS 439
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 122/288 (42%), Gaps = 36/288 (12%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
+P +K + ++CG HTL L++ G +YA G+ +G LG + + P+R+
Sbjct: 171 KPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDT-SDAYSPVRVLL 229
Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
SG KKE + I + G HS A T DG L+ WG NG+LGLG
Sbjct: 230 GSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ + + G S + G + +WG+GG GRLGHG + I
Sbjct: 290 RGSL--SPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEI--- 344
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
PR ++ GV V A G H+ + G V+ +G + E
Sbjct: 345 ------PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGM 398
Query: 281 PSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ L E V G YH+ +T GG+L WG + LG G
Sbjct: 399 VTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGD 446
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 144/339 (42%), Gaps = 45/339 (13%)
Query: 72 SLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQ 127
S+K +A G HTL + G + A G N LG+ + P + + V +
Sbjct: 47 SVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFE 106
Query: 128 ISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAK------------------- 163
+S G ++S+ + G++Y +G + G+LG K A+
Sbjct: 107 VSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166
Query: 164 -VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS------ 216
P P +V + + G + ++A++ GG + +WG G G LG G S
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVR 226
Query: 217 -ILGFLRSTSEYTPRL---IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+LG + + + L + + V V AAG HS +G ++ +G ++
Sbjct: 227 VLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGL 286
Query: 273 QEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ P+++ + +VV G H+ + G LYTWGS G LG G +
Sbjct: 287 GHNRGSLSPAVVDYI-LDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP 345
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
P +V+G F PV QV+CG HT A++ +G + WG G
Sbjct: 346 VPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAG 383
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YGRLG+G+ + + P C + ++++A G +H+L L+ G ++ G +
Sbjct: 697 WGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTC 756
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ N L +V I+ HHS A+T GE++ WG N Q G GK+ A
Sbjct: 757 STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQA 816
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + P + L + + A G + S V G+V + G GRLG G
Sbjct: 817 ERLDRPEMIAGLPNV-CQWVATGPQASFFVLCSGEVYAAGVINGGRLGTG 865
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 112/282 (39%), Gaps = 68/282 (24%)
Query: 117 RISGL-KKEVVQISTGYHHSSAITVDGE---LYMWGKNSNGQLGLG-KKAAKVIPIPTKV 171
RI+ L V +++ G +H+ + + G+ L WGKN N LGLG + +V P
Sbjct: 39 RIARLGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPF 98
Query: 172 ECLSGIF-----TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
G+F T +A+ ++ A GGKV ++G G GRLG+ + + G + +
Sbjct: 99 FSRHGVFEVSCGTNNSAVLVKR--AQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDD 156
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
A G E+G + A ++ F++ R
Sbjct: 157 ----------------AGDG-------QEDGPSWFTPKPA--RVRFRDKCKIAR------ 185
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ----------- 335
+ CG HT L+ GG LY WG G LG G +SP RV
Sbjct: 186 ------ISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKK 239
Query: 336 -----GPFSESPVDQVSC--GWKHT-AAISEGKILTWGWGGS 369
G PV C G KH+ A S+G + TWG GG+
Sbjct: 240 ENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGN 281
>gi|294816123|ref|ZP_06774766.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
gi|294328722|gb|EFG10365.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
Length = 527
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 34/358 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
WG G+LG ++ R+ P A K ++ LA G T + L V+ G
Sbjct: 155 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 214
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
ND GQLG P R+ GL + Q++ G H+ A+ +G+ ++ WG N +
Sbjct: 215 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 273
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG K +P+P V+ L+G T A G E S+A+ GG +++WG G+LG+
Sbjct: 274 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 331
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
L ST P +K L V+I AAG S +G + +G+ ++
Sbjct: 332 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 381
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ ++ P ++ LP +E +V GG H+ L S +Y WGSN+ G L G+I+
Sbjct: 382 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 437
Query: 331 PERVQGPFSESP-VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQ 383
P S+ P V ++ G + A+++G GWG G G+ + D H+ GQ
Sbjct: 438 PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHTLVGQ 495
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
A+ D + WG N GQLG + P P + L +Q A G + + V
Sbjct: 145 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 202
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ V +WG G+LG G L + + P + L G+ AAG LH+
Sbjct: 203 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 252
Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
+ NG V+ +G D + Q G+ P + +P + V G H
Sbjct: 253 LALRNNGDPQDGVWAWG----DNIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 307
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
+ L GG L WG+N+ G LG +I + P V+ SPV +++ G + A +++
Sbjct: 308 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVKN--LTSPVVEIAAGCNFSLARLAD 365
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRGQ----LTP 391
G I WG E+GH G+L GQ LTP
Sbjct: 366 GTIKAWG---------ENGH---GELGNGQTANSLTP 390
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 180/369 (48%), Gaps = 25/369 (6%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGC 91
+R WGN G LGLG +E + P FE +++K++ACG HTL +TE G
Sbjct: 15 FRRLTMYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQ 74
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKN 150
+YA G NDFGQLG + G + +I G++ V+ ++ G HS A+ G+LY WG +
Sbjct: 75 LYACGSNDFGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSD 131
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S GQLGL + P V+ L+ + Q + G++ +A+T G++ +WG+
Sbjct: 132 SCGQLGLETDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS------- 183
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ + L + P L+ L G+ + A G HS + ++G V+ +G ++
Sbjct: 184 -NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQL 242
Query: 271 LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVL 328
P+ + + + + GG V LT G ++T G+ G LG GS
Sbjct: 243 GINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNE 302
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGTFSEDGHSSGGQL 384
P +V S V QV+CG +HT + S+G++ ++G G G GT S +S+ QL
Sbjct: 303 IVPRKVL-ELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSS-INSNTPQL 360
Query: 385 DRGQ-LTPS 392
G L+PS
Sbjct: 361 VLGPWLSPS 369
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 54 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ + P + LEGV++ A G HS + E G+V +G ++
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
+ + P+ I L + V GG + +T GGEL+ WG+ ++ LG+ G ++ +P
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 342
Query: 333 RVQ 335
V
Sbjct: 343 EVN 345
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 190
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 191 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 248
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 249 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 305
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 306 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 358
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 359 RPRLVAALQGKKVNRVACGSAHT 381
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 91 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 149
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 207
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 258
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 318
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 377
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 378 SAHTLAWSTSK 388
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 25 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 82
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 83 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 195
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 196 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 249
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 309
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 310 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 342
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 20 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 77
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+ TP L++ ++ V +K A +G H + G V
Sbjct: 78 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 128
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ + RP +I L E +V GG H+ +T+ G+LYTWG
Sbjct: 129 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 188
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWG 367
G LG + P+ V+ VD ++CG + + + +WG G
Sbjct: 189 GRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDG 240
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 245 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 302
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 303 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 361
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 362 LVAALQGKKVNRVACGSAHTLA 383
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 148/335 (44%), Gaps = 37/335 (11%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG LG+G+ L+ + PV ++ +A G H+L LT TG V A G N +
Sbjct: 68 WGRDGYGALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYY 127
Query: 101 GQLG-------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G LG ++N Y + + V ++ +S A+T G + WG N G
Sbjct: 128 GVLGNGTKTDNSAQNDSYVPAAVHLPA-GTTVTSVAASSTYSLALTATGTVLAWGNNDQG 186
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G +P+P + + I AA +A+T G VL+WG+ GSG+LG+G
Sbjct: 187 QLGNGTNTDSYLPVPLALPAATTITAIAAA--TNHGLALTSNGTVLAWGSNGSGQLGNGN 244
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--DKML 271
+T+ TP + G + AA HS + G V +G V ++
Sbjct: 245 ---------TTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLPIPIV 295
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
F G V G H+ LTS G+++TWG+N G LG G+ P
Sbjct: 296 FPAGITI------------TAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFANSSVP 343
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
P +++ + ++ G + A+ S GK+L WG
Sbjct: 344 VPASVP-TDTTITAIAGGNAQSLALTSTGKLLAWG 377
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV + ++ A+A G+H++ LT TG V G +
Sbjct: 232 WGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLP 291
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ I G + + +++G HS A+T G+++ WG N G LG G A
Sbjct: 292 IPIVFPAGIT------------ITAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFAN 339
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+P V + I A G QS+A+T GK+L+WG G++G+G + G
Sbjct: 340 SSVPVPASVPTDTTI--TAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRT---GSWP 394
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
P + K+ A G+ HS +
Sbjct: 395 GMGVSVPVPVSLAADTKITTMAGGYYHSLAV 425
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G LG G+ + PV S ++ A+A G A +L LT TG + A G N++GQ
Sbjct: 324 WGANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQ 383
Query: 103 LGISEN------IGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVD 141
+G +G S+ P+ +S ++ ++ GY+HS A+ +
Sbjct: 384 VGNGTRTGSWPGMGVSV-PVPVSLAADTKITTMAGGYYHSLAVAAE 428
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 163/320 (50%), Gaps = 40/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++A+ACG H +T+ G V++ G G+L G+ ++ + P + GLK V+ ++
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 329
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G + S A+T+ G+LY+WG N+ G LG G +A + +P K+ L GI + G
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQW--VPRKLSGPLEGIHVSSVSCGP 387
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG SS+ TPR ++ L+G++ A G
Sbjct: 388 WHTAVVTSAGQLFTFGDGTFGVLGHGDRSSV---------STPREVESLKGLRTMRVACG 438
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 439 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKEARLVPTYVATLVEPSF 496
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG T LT+ G++YT GS G LG D P RV+G ++ V++++CG
Sbjct: 497 CQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADG-KVPTRVEGKLMKNFVEELACGA 555
Query: 351 KHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 556 YHVAVLTSRTEVYTWGKGAN 575
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 151/341 (44%), Gaps = 49/341 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
WG GRLG G P + +++ +ACG + +T +G +Y G N +F
Sbjct: 295 WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNF 354
Query: 101 GQLGI-SENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG SE + P ++SG + V +S G H++ +T G+L+ +G + G LG
Sbjct: 355 GLLGCGSEATQWV--PRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 412
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G +++ + P +VE L G+ T + A G + AV GK+ +WG G
Sbjct: 413 GDRSS--VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 470
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLGHG + + L P + L A G + + +G+VY G
Sbjct: 471 KGRLGHGDKEARL---------VPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGS- 520
Query: 266 AVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG
Sbjct: 521 ---PVYGQLGN----PQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKG 573
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G D + P V+ + V + CG TAAI
Sbjct: 574 ANGRLGHGDTDDRNFPSIVEA-LKDKQVKGIICGTSFTAAI 613
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G+V SWG GRLGHG +S +
Sbjct: 261 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 311
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+ + L+ V++ A G S + +G +YI+G A + L G+ A + P +
Sbjct: 312 SHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKL 371
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
S + + V CG +HT V+TS G+L+T+G G LG G + +P V+
Sbjct: 372 SGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVES-LKGL 430
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
+V+CG HTAA+ E GK+ TWG G
Sbjct: 431 RTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 469
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
+ P+ ++ + V+ A G H+A + + G V+ +G+ ++ + P +
Sbjct: 260 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 319
Query: 287 LPY--SEEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESP 342
L E V CG Y +C +T G+LY WG N G LG GS P ++ GP
Sbjct: 320 LKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIH 379
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
V VSCG HTA + S G++ T+G GTF GH
Sbjct: 380 VSSVSCGPWHTAVVTSAGQLFTFG----DGTFGVLGH 412
>gi|340054997|emb|CCC49305.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 622
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 163/356 (45%), Gaps = 34/356 (9%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
R+F WG+G G LG L+ R P V + F + ++ G +++ L+E G VY
Sbjct: 172 RQFLYSWGSGTSGELGTQCLQDRDTPTLVQITPFGVR-VADVSLGASYSCALSEDGNVYT 230
Query: 95 TGLNDFGQLGISE---------NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
G D+GQLG+S + + P RI +++ V I+ GY ++ A+T D +
Sbjct: 231 FGNGDWGQLGLSNPRNTVELSGDTVVATVPKRIPLFERQPAVHIAAGYAYAMALTADHHV 290
Query: 145 YMWGKNSNGQLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
Y WG N++GQ GLG + +++ PT V L G Q + G ++A++ G + S
Sbjct: 291 YFWGNNNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYS 350
Query: 201 WGAGGSGRLGHGQE-------SSILG----FLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
WG LG E S+I+G R T P++++ K+ AG H
Sbjct: 351 WGLLECLGLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVVRVPTQHKLVRINAGQWH 410
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
S I G ++ +G ++ RP + E VV CG +HT LT
Sbjct: 411 SGAISVAGELFTWGVGFQWRLGHGSNEPGLRPQRVLGALVGEHVVDVACGSFHTVALTDK 470
Query: 307 GELYTWGSNENGCLGIGSI-DVLHSPERVQGP--FSESPVDQVSCGWKHTAAISEG 359
G++Y WG N + G +I DV+ +P V + V +SCG +HT + EG
Sbjct: 471 GKVYCWGDNASRQCGANAIVDVVKAPYHVANLEFIASGIVKAISCGRQHTVVVVEG 526
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 40/288 (13%)
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV--------IPI 167
++I+ V +S G +S A++ DG +Y +G GQLGL V +
Sbjct: 200 VQITPFGVRVADVSLGASYSCALSEDGNVYTFGNGDWGQLGLSNPRNTVELSGDTVVATV 259
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF---LRST 224
P ++ A G+ ++A+T V WG G+ G G L F LR
Sbjct: 260 PKRIPLFERQPAVHIAAGYAYAMALTADHHVYFWGNNNHGQSGLGP----LSFGCELRIV 315
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------DRAVDKM 270
E P L+ LEG ++ + G + + +G +Y +G D
Sbjct: 316 EE--PTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYSWGLLECLGLGSADEVRSMVRDSA 373
Query: 271 LFQEGNHARRPSLI-----SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ E A R +++ ++P ++V G +H+ ++ GEL+TWG LG
Sbjct: 374 IMGESLSAERRTVVLEPQVVRVPTQHKLVRINAGQWHSGAISVAGELFTWGVGFQWRLGH 433
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
GS + P+RV G V V+CG HT A+++ GK+ WG S
Sbjct: 434 GSNEPGLRPQRVLGALVGEHVVDVACGSFHTVALTDKGKVYCWGDNAS 481
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 117/277 (42%), Gaps = 62/277 (22%)
Query: 42 LWGNGDYGRLGLGSL----ESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WGN ++G+ GLG L E R P + + E + L+CG TL L+ G +Y+
Sbjct: 292 FWGNNNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYSW 351
Query: 96 GLNDFGQLGISENI-------------------GYSLEP--LRISGLKKEVVQISTGYHH 134
GL + LG ++ + LEP +R+ + ++V+I+ G H
Sbjct: 352 GLLECLGLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVVRVP-TQHKLVRINAGQWH 410
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S AI+V GEL+ WG +LG G + P + L G A G +VA+T
Sbjct: 411 SGAISVAGELFTWGVGFQWRLGHGSNEPGLRP-QRVLGALVGEHVVDVACGSFHTVALTD 469
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK---VKIAAAGFLHSA 251
GKV WG S + G ++I+ +++ P + LE + VK + G H+
Sbjct: 470 KGKVYCWGDNASRQCG---ANAIVDVVKA-----PYHVANLEFIASGIVKAISCGRQHTV 521
Query: 252 CIDE----------------------NGRVYIFGDRA 266
+ E +GRVY FGD A
Sbjct: 522 VVVEGPHSDCQCTCCKLGPDGQPGGQHGRVYAFGDVA 558
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 144/321 (44%), Gaps = 22/321 (6%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G G + R RPV ++ A + G H + LT+TG Y+ G ND GQLG
Sbjct: 391 GQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLG- 449
Query: 106 SENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
EN+ + P I LK K++ S YHHS+ IT GELY +G N GQLGL +
Sbjct: 450 HENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQ 509
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V+ L A G ++ T G++ + G G+LG I
Sbjct: 510 --STPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQI------ 561
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P L+ L V A G+ HS + GR + FG ++ H P++
Sbjct: 562 ---KLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNV 617
Query: 284 ISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG-IGSID-VLHSPERVQGPFS 339
++ + V CG YHT +L+ G++Y +G N G LG GS D +L P +V+ +
Sbjct: 618 VALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKN 677
Query: 340 ESPVDQVSCGWKHTAAISEGK 360
V+ G+ T+ I E K
Sbjct: 678 SRRCVDVAAGFYTTSLIVERK 698
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 24/331 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG LG G R + S ++ + G LT G V GLN GQ
Sbjct: 334 GQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQC 393
Query: 104 G---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G E + L P++ + + + + S G H A+T G Y WG N GQLG
Sbjct: 394 GQGHFDERV-MMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHEN 452
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
A K I +P +E L A++ + S +T G++ ++G G+LG H Q S
Sbjct: 453 LATK-IHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQS- 510
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
TP+L+K LE +V + A G H+ G ++ G ++
Sbjct: 511 ----------TPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQ 560
Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+ P+L++ LP V CG YH+ V+++GG +++G N+ G LGIGS V + V
Sbjct: 561 IKLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGS-KVHQNVPNVV 618
Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
S + + + +CG HT +SE G++ +G
Sbjct: 619 ALSSNTRMVRATCGCYHTVLLSEQGQVYVFG 649
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 134/276 (48%), Gaps = 17/276 (6%)
Query: 89 TGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
+G +Y+ G N +G+LG ++I + L + + G ++ Q+ +G + +T +G +
Sbjct: 327 SGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWD-DIRQVVSGNETLAVLTNEGVVLTC 385
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
G N +GQ G G +V+ + V+ L K A+ G E +A+T G SWG
Sbjct: 386 GLNKSGQCGQGHFDERVMML-RPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGH +T + P+LI+ L+ K+ A+ + HSA I + G +Y FG
Sbjct: 445 RGQLGHEN--------LATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMN 496
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ H P L+ L +E V CG YHT + T+ GEL+T G N+ G LG+
Sbjct: 497 DCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLA 556
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
+ P V P V V+CG+ H+ +S G
Sbjct: 557 HNRQIKLPTLVALP--NEMVSFVACGYYHSVVVSTG 590
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
M+ R + A+ Q +K + C+ I+ T A WG D G+LG +L ++
Sbjct: 403 MMLRPVQALRS----QRVKFIAASNGCEHMIALT-DTGLAYSWGYNDRGQLGHENLATKI 457
Query: 61 R-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + L + H+ +T+ G +Y G+ND GQLG+ S L S
Sbjct: 458 HVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKS 517
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
EV ++ G +H+ T GEL+ GKN GQLGL + I +PT V L
Sbjct: 518 LEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN--RQIKLPTLV-ALPNEMV 574
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G+ SV V+ GG+ S+G G+LG G + + P ++ +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK---------VHQNVPNVVALSSNTR 625
Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
+ A G H+ + E G+VY+FG
Sbjct: 626 MVRATCGCYHTVLLSEQGQVYVFG 649
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LGL P + A + +ACG H++ ++ G ++ G ND+GQL
Sbjct: 546 GKNDYGQLGLAHNRQIKLPTLV-ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQL 604
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI + ++ + +V+ + G +H+ ++ G++Y++G+N+ GQLG A
Sbjct: 605 GIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADA 664
Query: 164 VIPIPTKV 171
++P+P KV
Sbjct: 665 LLPVPLKV 672
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ ST R F+ +G DYG+LG+GS + P V + + CG HT+ L+E G
Sbjct: 586 VVSTGGRAFS--FGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQG 643
Query: 91 CVYATGLNDFGQLGISENIGYSLE-PLRISGLK--KEVVQISTGYHHSSAITV------D 141
VY G N+ GQLG + L PL++ K + V ++ G++ +S I D
Sbjct: 644 QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDD 703
Query: 142 GELYMWGKN 150
G++ M ++
Sbjct: 704 GDVIMLDQS 712
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 26 ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
IC +++ + WG G +GRLG E+ P + +ACG HTL
Sbjct: 110 ICDGHMAAVTEDGSVWTWGRGTFGRLGHEVHETGI-PEKVPGLDGMRFVKVACGHVHTLA 168
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL 144
LT+ G V+A G N G +G+S+ + P I L+ K+++ IS G S+A++ + E+
Sbjct: 169 LTDDGRVFAWGNNKTGCVGVSDR--GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEV 226
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG ++ GQLGLG + A+ I PT++ L + Q A G +A++ G+V +WG G
Sbjct: 227 YTWGADNYGQLGLG-QGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+ + + P +I L+ +VK+ AAG HSA +D+ GR++ G+
Sbjct: 286 LQGQTAN---------EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 26/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG+G+ P + + A G T +T+ G ++ G D Q
Sbjct: 19 WGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQGDSNQ 78
Query: 103 LGISENIGYSLEPL------RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG + S + L GL VV S H +A+T DG ++ WG+ + G+LG
Sbjct: 79 LGHGDTGDCSNQVLPREVEDAFDGLS--VVNCSICDGHMAAVTEDGSVWTWGRGTFGRLG 136
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
IP KV L G+ + A G ++A+T G+V +WG +G +G
Sbjct: 137 ---HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVG------ 187
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG 275
+ P+ I+ L G K+ +AG SA + VY +G ++ L Q
Sbjct: 188 ----VSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGA 243
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ +P+ I L ++ CG YH L++ GE+Y WG G V +
Sbjct: 244 RYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTA-NEKKVDTNIPH 302
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V ES V ++ G H+A + + G++ T G
Sbjct: 303 VIDALKESRVKMIAAGGSHSAVVDDKGRLFTVG 335
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 22/285 (7%)
Query: 42 LW--GNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
LW G GD +LG G V V AF+ S+ + H +TE G V+
Sbjct: 68 LWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTW 127
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G FG+LG + + P ++ GL V+++ G+ H+ A+T DG ++ WG N G
Sbjct: 128 GRGTFGRLG--HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGC 185
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + P ++E L G + G E S A++ +V +WGA G+LG GQ
Sbjct: 186 VGVSDRGTCA---PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQG 242
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ + P I+ L V + A G H + G VY +G + ++
Sbjct: 243 ARYIS--------QPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEK 294
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
P +I L S + + GG H+ V+ G L+T G E+
Sbjct: 295 KVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGEEED 339
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 26/290 (8%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYM 146
E G +Y G FGQLGI SL P + E+ + +++A G L+
Sbjct: 12 EGGYLYTWGSGQFGQLGIGTQNDESL-PQIAKEIDNEICTFTAAGANTTAAITQGGVLWT 70
Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+G+ + QLG G + +V+P + + G+ ++ AVT G V +WG
Sbjct: 71 FGQGDSNQLGHGDTGDCSNQVLPREVE-DAFDGLSVVNCSICDGHMAAVTEDGSVWTWGR 129
Query: 204 GGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGH E+ I P + L+G++ A G +H+ + ++GRV+ +
Sbjct: 130 GTFGRLGHEVHETGI-----------PEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAW 178
Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
G+ + + G A P I L + ++ G + L++ E+YTWG++ G
Sbjct: 179 GNNKTGCVGVSDRGTCA--PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQ 236
Query: 320 LGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
LG+G + P R++ P+ Q++CG H A+S G++ WG G
Sbjct: 237 LGLGQGARYISQPTRIR-TLRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + IP K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------IPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 32/361 (8%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + L P+ ++ L
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
A G + + +GRV+ G + + L + ++P L+ SE E+ C
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H VLTS E+YTWG NG LG G + P V+ + V +SCG T
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEA-LKDRHVKSISCGSNFTTC 595
Query: 356 I 356
I
Sbjct: 596 I 596
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 33/248 (13%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G ++ +GD + + L G P +S +V+ CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
T+G G LG G + L P+ V+ S +V+CG H+AAI E
Sbjct: 386 TFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQTGANVMSK 444
Query: 360 KILTWGWG 367
K+ TWG G
Sbjct: 445 KLYTWGDG 452
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERIVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ +V+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 -PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276
Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P ++ K E C HT T GG +Y WG + + + S + V F
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336
Query: 339 SESPV 343
+ V
Sbjct: 337 ATPAV 341
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 19/289 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTE 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ PR + KV + A G + S + G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVF 203
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++G ++ + P ++ L + V CG HT VLT G++Y WG+N G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
LG G+ P V + ++ +C HT+A G + WG
Sbjct: 264 QLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG ++ + TG V+ G N G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ + P P VE I A S A T GG V WG G S L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLTGKKIACLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ N P IS +++V+ CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A ++ G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3701 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3760
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3761 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3818
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +PTK++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3819 -GSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3875
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3876 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3928
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3929 RPRLVAALQGKKVNRVACGSAHT 3951
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 148/321 (46%), Gaps = 23/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 2655 GEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGD 2713
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2714 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 2772
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2773 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2827
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 2828 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2881
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 2882 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV 2941
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
QG + +V+CG H+ A
Sbjct: 2942 QG-LEGQKITRVACGSSHSVA 2961
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2599 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2658
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2659 NGRLGLGLSSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2717
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 2718 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 2769 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2828
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 2829 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 2884
Query: 386 RGQLT 390
+ Q+
Sbjct: 2885 KPQVV 2889
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 193 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKAISAFSGKQAGKHVVHIACGSTY 251
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 252 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 309
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 310 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 360
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 361 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 420
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 421 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 465
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG
Sbjct: 3661 ESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-R 3719
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3720 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3777
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3778 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPTK 3828
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3829 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3888
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 3889 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 3947
Query: 350 WKHTAAISEGKILTWG 365
HT A S K + G
Sbjct: 3948 SAHTLAWSTSKPTSAG 3963
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 150/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ +G VY N +L P + GL
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDTLAPQLVQGL 179
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKAISAFSG 235
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 236 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 283
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 343
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 344 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 402
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 403 VAAGSTHCLALTEDSEVHSWG 423
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2709 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2769 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2826
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2827 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2883
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2884 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2932
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2933 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2964
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3595 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3652
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3653 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3710
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3711 HGSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3765
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3766 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P+ I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 3820 SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3879
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 3880 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3912
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L +V+ + +G H
Sbjct: 2637 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRH 2696
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2697 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2754
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2755 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2805
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2806 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2865
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2866 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 2923
Query: 370 HG 371
HG
Sbjct: 2924 HG 2925
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P SAF KH + +ACG ++ +T G +Y G
Sbjct: 208 WGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 266
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 267 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 325
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 326 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 383
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 384 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2591 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2648
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 2649 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATAL 2700
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYT
Sbjct: 2701 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2760
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 2761 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 2818
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 264 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 323
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 324 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 382
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 383 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 123/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
G +Y WG N GQLG G + AKV +P
Sbjct: 3590 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3648
Query: 168 -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3649 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3708
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3709 LGHGSRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3759
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3760 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3820 SDGCKVPTKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 3874
Query: 384 LDR 386
+ R
Sbjct: 3875 VRR 3877
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 318 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 377
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 378 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 429
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 193 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYS 252
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 253 AAITAEGELYTWGRGNYGRLGHGS-SED 279
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 31/331 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + ++ +ACG HT ++ +G ++ G N+
Sbjct: 289 WGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNS 348
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+SG + +V+ I+ G HS+ T +G+L+ +G + G LG G
Sbjct: 349 GLLGHGTDVSHWI-PKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHG 407
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
+ K + P +++ L+G+ T + A G + A+ K+ +WG G R
Sbjct: 408 DR--KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHR 465
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L + A G + + +G V+ G A
Sbjct: 466 LGHGNKDAYL---------LPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYG 516
Query: 269 KMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ L ++ + P L+ + EE+ CG YHT VLTS E++TWG NG LG G
Sbjct: 517 Q-LGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDT 575
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ P V+ E V +SCG T++I
Sbjct: 576 EDRKLPTLVEA-LKERHVKNLSCGANFTSSI 605
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 43/353 (12%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLN 98
+W +G + + S+ ++ + E + + ++CG H +T G V+ G
Sbjct: 233 IWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEE 292
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLG 156
G+LG ++ L S + ++ G +H+ AI+ G+L+ WG SN G LG
Sbjct: 293 SGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLG 352
Query: 157 LGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G + IP +V L G+ A G S T GK+ ++G G G LGHG
Sbjct: 353 HGTDVSHW--IPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRK 410
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE----------NGRVYIFGDR 265
S+ +P+ ++ L G+K A G H+A I E + +++ +GD
Sbjct: 411 SV---------SSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDG 461
Query: 266 AVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
DK GN P+ +S L Y+ +++ CG T LT+ G ++T G + G LG
Sbjct: 462 --DKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG 519
Query: 322 ----IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
G I L +R+ G F V+++SCG HTA + S ++ TWG G +
Sbjct: 520 NPSSNGKIPCLVQ-DRLVGEF----VEEISCGAYHTAVLTSRSEVFTWGRGAN 567
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 30/284 (10%)
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
++N + +PL S + +V QIS G H + +T GE++ WG+ S G+LG G +
Sbjct: 249 TKNDVLTPKPLE-SNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH--F 305
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRS 223
P VE L+ A G + A++ G + +WG G SG LGHG +
Sbjct: 306 THPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTD--------- 356
Query: 224 TSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S + P+ + LEG++V A G HSA NG+++ FGD + + P
Sbjct: 357 VSHWIPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPK 416
Query: 283 LISKLP--YSEEVVCGGYHTCVLT----------SGGELYTWGSNENGCLGIGSIDVLHS 330
+ L + +V CG +HT + S +L+TWG + LG G+ D
Sbjct: 417 ELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLL 476
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
P V + Q++CG T A+ + G + T G G ++G
Sbjct: 477 PTCVSS-LIDYNFQQLACGHTMTVALTTSGHVFTMG-GSAYGQL 518
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
S + R WG+GD RLG G+ ++ P S+ ++ + LACG T+ LT +G V
Sbjct: 448 SNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHV 507
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ G + +GQLG + G ++ + + V +IS G +H++ +T E++ WG+ +N
Sbjct: 508 FTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGAN 567
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
GQLG G + +PT VE L K + G F S+ +
Sbjct: 568 GQLGHGDTEDR--KLPTLVEALKERHVKNLSCGANFTSSICI 607
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 240
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 366 WGGSHG 371
G HG
Sbjct: 359 -DGRHG 363
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
+ +I AGF + + + G V+ FG K F E ++ SK + ++
Sbjct: 29 QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG HT ++T +LY +GSN G LG+GS + P ++ E V +CG
Sbjct: 77 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK-VKLAACGRN 135
Query: 352 HT 353
HT
Sbjct: 136 HT 137
>gi|254390852|ref|ZP_05006063.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|197704550|gb|EDY50362.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
Length = 564
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 34/358 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
WG G+LG ++ R+ P A K ++ LA G T + L V+ G
Sbjct: 192 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 251
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
ND GQLG P R+ GL + Q++ G H+ A+ +G+ ++ WG N +
Sbjct: 252 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 310
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG K +P+P V+ L+G T A G E S+A+ GG +++WG G+LG+
Sbjct: 311 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 368
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
L ST P +K L V+I AAG S +G + +G+ ++
Sbjct: 369 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 418
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ ++ P ++ LP +E +V GG H+ L S +Y WGSN+ G L G+I+
Sbjct: 419 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 474
Query: 331 PERVQGPFSESP-VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQ 383
P S+ P V ++ G + A+++G GWG G G+ + D H+ GQ
Sbjct: 475 PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHTLVGQ 532
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
A+ D + WG N GQLG + P P + L +Q A G + + V
Sbjct: 182 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 239
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ V +WG G+LG G L + + P + L G+ AAG LH+
Sbjct: 240 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 289
Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
+ NG V+ +G D + Q G+ P + +P + V G H
Sbjct: 290 LALRNNGDPQDGVWAWG----DNIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 344
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
+ L GG L WG+N+ G LG +I + P V+ SPV +++ G + A +++
Sbjct: 345 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVKN--LTSPVVEIAAGCNFSLARLAD 402
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRGQ----LTP 391
G I WG E+GH G+L GQ LTP
Sbjct: 403 GTIKAWG---------ENGH---GELGNGQTANSLTP 427
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 181/373 (48%), Gaps = 42/373 (11%)
Query: 6 LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC 65
++A++ +Q + GS + R + L WG + G+LG GS ++R PV
Sbjct: 56 ISALSLSNTQQGVSAGSYHSLLLRSTGAVLA------WGQNNSGQLGDGSTQNRTLPV-- 107
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---------SENIGYSLEPL 116
+ S+KA++ GG+++L + G V+A G N+ GQLG SE + + P+
Sbjct: 108 NVLGLPSIKAISAGGSYSLAVGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPV 167
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
I + +S G +HS A+ DG+L+ WG N+ GQLG G A ++ P+ + G
Sbjct: 168 SIV-IPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGTTANRLAPVSVNIP--GG 224
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G+ S+A+ G+V +WG SG++G+G ++ L TP ++
Sbjct: 225 AIA--IAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQL---------TPVVVA-FP 272
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV 294
G + +A G HS + NG V+ +G A + +G++A R P + + + +V
Sbjct: 273 GSAIAVAGGGS-HSLVVLSNGTVWSWG--ANNAGQLGDGSNATRVSPIQVPGIGVATKVA 329
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
GGY + +TS G +++WG N G LG GS+ P + + S +S G+ H+
Sbjct: 330 AGGYFSLAITSDG-VWSWGQNTRGQLGNGSLANSSVPVFIT---ATSNALALSGGYHHSL 385
Query: 355 AISEGKILTWGWG 367
+ G + W WG
Sbjct: 386 ILRPGCPI-WAWG 397
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--------HTLFLTETGCVYA 94
WG + G+LG G L + + F+ + + GGA H+L L + G ++A
Sbjct: 137 WGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAAVSGGLNHSLALAKDGKLWA 196
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N +GQLG L P+ ++ + + I+ G++HS AI DG ++ WG+N++GQ
Sbjct: 197 WGANTYGQLG-DGTTANRLAPVSVN-IPGGAIAIAAGWYHSLAIARDGRVWAWGRNNSGQ 254
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G G A ++ P+ V G A G S+ V G V SWGA +G+LG G
Sbjct: 255 VGNGGTANQLTPV---VVAFPGSAIAVAG-GGSHSLVVLSNGTVWSWGANNAGQLGDGSN 310
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
++ R + P + GV K+AA G+ A I +G V+ +G ++
Sbjct: 311 AT-----RVSPIQVPGI-----GVATKVAAGGYFSLA-ITSDG-VWSWGQNTRGQLGNGS 358
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++ P I+ + + G +H+ +L G ++ WG N G LG G++
Sbjct: 359 LANSSVPVFITATSNALALSGGYHHSLILRPGCPIWAWGFNAYGQLGDGTL 409
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 121/257 (47%), Gaps = 21/257 (8%)
Query: 117 RISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
IS L Q +S G +HS + G + WG+N++GQLG G + +P+ V L
Sbjct: 55 EISALSLSNTQQGVSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPV--NVLGL 112
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
I K + G S+AV GKV +WGA SG+LG G LG +S SEY +
Sbjct: 113 PSI--KAISAGGSYSLAVGADGKVWAWGANNSGQLGTG----YLGNGKSGSEYADFQVTP 166
Query: 235 LEGVKVKIAAA---GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYS 290
+ V AAA G HS + ++G+++ +G ++ +G A R + +S +P
Sbjct: 167 VSIVIPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQL--GDGTTANRLAPVSVNIPGG 224
Query: 291 EEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G YH+ + G ++ WG N +G +G G +P V P S V+ G
Sbjct: 225 AIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQLTPVVVAFPGSAI---AVAGG 281
Query: 350 WKHT-AAISEGKILTWG 365
H+ +S G + +WG
Sbjct: 282 GSHSLVVLSNGTVWSWG 298
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS +R P+ + +A GG +L +T G V++ G N GQ
Sbjct: 297 WGANNAGQLGDGSNATRVSPIQVPGIGVAT--KVAAGGYFSLAITSDG-VWSWGQNTRGQ 353
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + ++ S P+ I+ + +S GYHHS + ++ WG N+ GQLG G
Sbjct: 354 LG-NGSLANSSVPVFITATSN-ALALSGGYHHSLILRPGCPIWAWGFNAYGQLGDGTLVD 411
Query: 163 KVIPIPTKV 171
++ P+ ++
Sbjct: 412 RLAPVQAEI 420
>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 1106
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
W GRLG G RP + ++ +ACG HT ++ +G ++ G+++
Sbjct: 294 WEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNV 353
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+SG + +V+ ++ G HS+ T +G+L+ +G + G LG G
Sbjct: 354 GLLGHGSDLSHWI-PKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG 412
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV----------TGGGKVLSWGAGGSGR 208
+ + + P +V+ LSG+ T + A G +VA+ T K+ +WG G R
Sbjct: 413 DRES--VSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNR 470
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G +
Sbjct: 471 LGHGNKETYL---------LPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTS-H 520
Query: 269 KMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
L + + P L+ + EE+ CG +H VLTS E++TWG NG LG G
Sbjct: 521 GQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDK 580
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
D +P V+ E V +SCG T++I
Sbjct: 581 DDRKTPTLVEA-LRERHVKSISCGSNFTSSI 610
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 30/276 (10%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V QI+ G H + +T GE++ W + + G+LG G + + P VE
Sbjct: 262 KPLE-SNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVD--VCRPKLVEF 318
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AV+ G + +WG G G LGHG + S + P+
Sbjct: 319 LALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSD---------LSHWIPKR 369
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ +EG++V A G HSA NG+++ FGD A + + P + L
Sbjct: 370 VSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGL 429
Query: 289 YSEEVVCGGYHTCVL----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +V CG +HT + TS +L+TWG + LG G+ + P V
Sbjct: 430 KTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSS-L 488
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
+ +Q++CG T A+ + G + T G G SHG
Sbjct: 489 IDYNFNQIACGHTFTVALTTSGHVFTMG-GTSHGQL 523
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 136/313 (43%), Gaps = 34/313 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ACG H +T G V+ G+LG + L + ++ G +H+
Sbjct: 275 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHT 334
Query: 136 SAITVDGELYMWGK--NSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVA 191
A++ G+L+ WG ++ G LG G + IP + VE G+ A G S
Sbjct: 335 CAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVE---GLQVLSVACGTWHSAL 391
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T GK+ ++G G G LGHG S+ P+ +K L G+K A G H+
Sbjct: 392 ATANGKLFTFGDGAFGVLGHGDRESV---------SYPKEVKMLSGLKTLKVACGVWHTV 442
Query: 252 CIDE----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGG 297
I E + +++ +GD DK GN P+ +S L Y+ ++ CG
Sbjct: 443 AIVEVMNQTGTSTSSRKLFTWGDG--DKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGH 500
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
T LT+ G ++T G +G LG + D P VQ V+++SCG H A +
Sbjct: 501 TFTVALTTSGHVFTMGGTSHGQLGSSNSDG-KLPCLVQDRLVGEFVEEISCGDHHVAVLT 559
Query: 357 SEGKILTWGWGGS 369
S ++ TWG G +
Sbjct: 560 SRSEVFTWGKGSN 572
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 7/164 (4%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ST R+ WG+GD RLG G+ E+ P S+ ++ +ACG T+ LT +G
Sbjct: 453 TSTSSRKLFT-WGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGH 511
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKN 150
V+ G GQLG S + G L L L E V +IS G HH + +T E++ WGK
Sbjct: 512 VFTMGGTSHGQLGSSNSDG-KLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKG 570
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
SNG+LG G K + PT VE L K + G F S+ +
Sbjct: 571 SNGRLGHGDKDDR--KTPTLVEALRERHVKSISCGSNFTSSICI 612
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 129 STGYHHSSAITVDGELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
STG I G++Y+WG+ + +G + V+ IP +E + Q
Sbjct: 217 STGTSGPDDIESLGDVYVWGEVWSDGISPDGVVNSTTVKIDVL-IPKPLESNVVLDVHQI 275
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G VT G+V +W GRLGHG + + P+L++ L +
Sbjct: 276 ACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVC---------RPKLVEFLALTNIDF 326
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGG 297
A G H+ + +G ++ +GD + L G+ P +S +V+ CG
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGT 386
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+H+ + T+ G+L+T+G G LG G + + P+ V+ S +V+CG HT AI
Sbjct: 387 WHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKM-LSGLKTLKVACGVWHTVAIV 445
Query: 358 E-----------GKILTWGWG 367
E K+ TWG G
Sbjct: 446 EVMNQTGTSTSSRKLFTWGDG 466
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276
Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P ++ K E C HT T GG +Y WG + + + S + V F
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336
Query: 339 SESPV 343
+ V
Sbjct: 337 ATPAV 341
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 19/289 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ PR + KV + A G + S + G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 203
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++G ++ + P ++ L + V CG HT VLT G++Y WG+N G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
LG G+ P V + ++ +C HT+A G + WG
Sbjct: 264 QLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG ++ + TG V+ G N G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ + P P VE I A S A T GG V WG G S L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ N P IS +++V+ CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A ++ G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431
Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
P LI + + ++ CG YHT V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
G+++T+G G S + HSP +G P V Q+ CG HT A
Sbjct: 410 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 458
Query: 356 -ISEGKILTWGWGGS 369
+ G++++ G G S
Sbjct: 459 VYTTGQVVSLGRGPS 473
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++E +G+ +AA G S+ + +V S G G+LG S
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 220
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
P I+ L V + + + G HS + GRV+ +G + ++ E + P+ I+
Sbjct: 221 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 280
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
L + +V CG YH+ L+ G++++WGSN G LG+G ++ SP++V+ P+
Sbjct: 281 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 339
Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQL 384
QV+ G H+ A+S ++GWG + G + G+S+ Q+
Sbjct: 340 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI 380
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 152/340 (44%), Gaps = 30/340 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3103 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P + L+ K++ I+ G HS+AI+ GELY WG G+LG G
Sbjct: 3163 KLG-HGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3221
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3222 ATQLKP--KLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3274
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3275 ----SEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3330
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I+ L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3331 RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3390
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
V++V+CG H+ A WG + + E+
Sbjct: 3391 -LDAVFVNRVACGSSHSMA----------WGLPNASLDEE 3419
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4204 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLA-GGEQSLFAVTPDGKLFATGYGSG 4261
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4262 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4320
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4321 GNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4374
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4375 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4424
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 4425 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4483 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTWG 4521
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3216 LGHGDN-ATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3274
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3275 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3330
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3331 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3381
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3382 NKKPALVIGLDAVFVNRVACGSSHS 3406
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4290 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMS--VADIACGS 4347
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4348 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4405
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4406 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4456
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4457 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4516
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4517 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4568
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 147/302 (48%), Gaps = 23/302 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3085 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3143
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G ++ + P VE L + A G S A++
Sbjct: 3144 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3201
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3202 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVTALHGRRVIQVACGSRDAQTLA 3252
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3253 LTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3312
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3313 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG-DND 3370
Query: 370 HG 371
HG
Sbjct: 3371 HG 3372
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4310 WGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4370 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4427
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4428 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4484
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G VY +GD ++ +
Sbjct: 4485 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4537
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4538 RPRLVAALQGKHIVKVTCGSAHTLALST 4565
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A + H + AL G AHTL LT G VYA G D+
Sbjct: 692 WGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL+PL I L + V ++ G S A+T +G+LY WGK S L ++
Sbjct: 752 GKLG-NGSCNSSLQPLLIECLPR-VQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +P + L A+G +A++ G++ WG + ++
Sbjct: 810 NVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A C G H L + Y+ G+ D +LG + L P +I L + V + G +
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRRVQSVYCGCSY 679
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT+ G LY WG+ + G+LG G + +P V L ALG ++ +
Sbjct: 680 SAAITLRGNLYTWGRGTYGRLGHGNSDDQC--MPAMVMALKDHQVLDVALGSGDAHTLCL 737
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T GG V +WG G G+LG+G +S L P LI+ L V+ A + F S
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGSCNSSL---------QPLLIECLPRVQRVFAGSQF--SLA 786
Query: 253 IDENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ G++Y +G + +++ + P LI+ L + V G H L+S GE
Sbjct: 787 LTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGE 846
Query: 309 LYTWGSNENGCLGIGSI---DVLHSPERVQGP 337
++ WG N+N + S+ +L P +V P
Sbjct: 847 IFGWGRNDNQQICPASVCSEPLLRQPIQVTLP 878
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A+ + Y WG + +LG G A+ +PTK+E L + G S A+T
Sbjct: 628 HFLAVDSNHNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVR-RVQSVYCGCSYSAAIT 684
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G + +WG G GRLGHG S + P ++ L+ +V A +G H+
Sbjct: 685 LRGNLYTWGRGTYGRLGHGN---------SDDQCMPAMVMALKDHQVLDVALGSGDAHTL 735
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
C+ G VY +GD K+ N + +P LI LP + V G + LT G+LY+
Sbjct: 736 CLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQLYS 795
Query: 312 WGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
WG + CLG ++ S R+ + V+ G H A+ S G+I WG
Sbjct: 796 WG--KASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 119/252 (47%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT + +S + A G + V+ GKV + G
Sbjct: 3047 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3104
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 3105 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3155
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ + +P L+ L + ++ CG H+ ++S GELYTWG E G
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG--GSHGTFS 374
LG G P+ V V QV+CG + T A++E G + +WG G G G
Sbjct: 3216 LGHGDNATQLKPKLVTALHGRR-VIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3274
Query: 375 EDGHSSGGQLDR 386
+G ++ +++R
Sbjct: 3275 SEGSATPHEIER 3286
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 16/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G +R P + + ++++ CG +++ +T G +Y G +G+
Sbjct: 641 WGVGDSRRLGHGDCHARELPTKIESLVRR-VQSVYCGCSYSAAITLRGNLYTWGRGTYGR 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + ++ +V+ ++ +G H+ +T G +Y WG G+LG G
Sbjct: 700 LGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSC 759
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
+ + P+ +ECL + ++ G + S+A+T G++ SWG LGH E ++ G
Sbjct: 760 NSSLQPL--LIECLPRV--QRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQG 813
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRLI L+ ++ A G H + NG ++ +G
Sbjct: 814 C------SVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 120/302 (39%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS---------------------------- 175
+Y WG N GQLG G + ++ I PT E LS
Sbjct: 4201 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGY 4258
Query: 176 ------------------------GIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
+F K+ A+ G + +A+T G+V +WG G G+L
Sbjct: 4259 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4318
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4319 GHGNRMSY---------DRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4370 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4429
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 4430 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 4484
Query: 385 DR 386
R
Sbjct: 4485 RR 4486
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
C G H + S Y+WG ++ LG G P +++ V V CG ++A
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVRR--VQSVYCGCSYSA 681
Query: 355 AIS-EGKILTWGWGGSHGTFSEDGH 378
AI+ G + TWG GT+ GH
Sbjct: 682 AITLRGNLYTWG----RGTYGRLGH 702
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P I+ L
Sbjct: 175 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE-KDRIIEIAACH 293
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 294 SAHTSAAKTQGGHVYMWG 311
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS ++ EV CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWG 367
++ WG N +G +G GS P RV G ++CG + A ++ G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 33/345 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG+G E + V +A E + ++++ G ++L + + G ++ G N G
Sbjct: 10 WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L +VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
GK + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 KDDTGKTLRRDIVIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S P ++ LE KVK+ A G H+ + E+G ++ +G+ ++
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--KVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
+ +P + L ++ GG+H+ LT GE+Y WG E+G LG G D
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 292
Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V E V Q+SCG H+ A++ +G++ ++G G HG
Sbjct: 293 VPQKVNLLAGEDIV-QLSCGGTHSVALTQDGRMFSFG-RGDHGRL 335
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV EK +K +A G H L L E G ++A G N++GQLG + S +P+ + GL
Sbjct: 190 PVRVQGLEK--VKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPIPVQGL 246
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T DGE+Y WG+ +G+LG G +P KV L+G
Sbjct: 247 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 306
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK- 239
Q + G SVA+T G++ S+G G GRLG+G++ + + ++ P K L G +
Sbjct: 307 QLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPP--KSLSGTEE 364
Query: 240 ------VKIAAAGFLHSACIDE 255
K+ A G H+ I E
Sbjct: 365 AEGHWIAKLVACGGRHTLAIVE 386
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 131/304 (43%), Gaps = 35/304 (11%)
Query: 92 VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ A G + GQLGI N + +LEP ++ + G +S AI DG+L
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVR-------SVVAGSRNSLAICDDGKL 59
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG + K IP++V+ L+ + QAA+G +AV G+ +WG
Sbjct: 60 FTWGWNQRGTLGHPAET-KTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 205 GSGRLGHGQE------SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
G+ G E ++ + P+L+ V+ AAG HS + G
Sbjct: 119 EYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLV-------VRQVAAGGTHSVVLTREGH 171
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
V+ +G + Q P + L + + G +H L G L+ WG+NE G
Sbjct: 172 VWTWGQPWPPGDIKQ----ISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSED 376
LG G P VQG + VD + GW TA +G++ WG G HG F ++
Sbjct: 228 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG-RGEHGRLGFGDN 286
Query: 377 GHSS 380
SS
Sbjct: 287 DKSS 290
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 113/430 (26%), Positives = 181/430 (42%), Gaps = 85/430 (19%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAAL---WGNGDYGRLGLGSLESRWR---------- 61
K+++ LGS I + + ++ + G + G+LGL L +
Sbjct: 1562 KRNLHLGSYSQILGKEVGGINKQEMCGILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKV 1621
Query: 62 --PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + ++ + CG +HT+ + +G V+ G N GQLG+ +N L
Sbjct: 1622 LYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNSPQIL------ 1675
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
S GY HS AIT ELY+WG S G G+G + P+ S I T
Sbjct: 1676 ---------SAGYEHSIAITKSNELYIWG--SGGLCGIGTLKQQNAPVKIDFFNKSKILT 1724
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE----YTPRLIKEL 235
A G +VAVT + SWG G+LG Q S+I+ + + TP+ I +L
Sbjct: 1725 --AVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQ-STIVKLCQGQGDEPQVLTPQRIPKL 1781
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------LFQEGNHARRPSL 283
EG+++ A G HS + ++G +Y +G ++ L E + P
Sbjct: 1782 EGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQE 1841
Query: 284 ISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG---------IGSIDVLHS-- 330
I+ L + + +++CG T T G+LY G N+ G LG I S++ +
Sbjct: 1842 INGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGK 1901
Query: 331 ---------PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
P RV F + Q++CG H+ A+S +G + W W G
Sbjct: 1902 HNQTSDVILPTRVIC-FQGIAIHQIACGESHSLAVSGDGMNMLWAW----------GMFK 1950
Query: 381 GGQLDRGQLT 390
GQL G++T
Sbjct: 1951 NGQLGLGEVT 1960
Score = 88.2 bits (217), Expect = 6e-15, Method: Composition-based stats.
Identities = 90/355 (25%), Positives = 145/355 (40%), Gaps = 98/355 (27%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+G G G+G+L+ + PV F K + CGG HT+ +T+ Y+ GL + G
Sbjct: 1693 IWGSG--GLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYSWGLTEGG 1750
Query: 102 QLGISENIGYS-----------LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGK 149
QLG+ ++ L P RI L+ ++ Q++ G HS A+T DG +Y WG+
Sbjct: 1751 QLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWGQ 1810
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
++ GQLGLG P LG E+S KV
Sbjct: 1811 SNYGQLGLGFSGDSFEP----------------GLGMEKS-------KV----------- 1836
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------ 263
Y P+ I L+ K+ G + + G +Y G
Sbjct: 1837 -----------------YEPQEINGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQ 1879
Query: 264 ---DRAVDKMLF------QEGNHARRPSLISKLPYSEEVVC-----------GGYHTCVL 303
D +++M ++G H + +I LP V+C G H+ +
Sbjct: 1880 LGLDTFMEEMQIASLEKVKKGKHNQTSDVI--LP--TRVICFQGIAIHQIACGESHSLAV 1935
Query: 304 TSGG--ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ G L+ WG +NG LG+G + + +P VQ S + +++CG H+ A+
Sbjct: 1936 SGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQS-LCSSQIQRIACGSMHSVAL 1989
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 19/294 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H
Sbjct: 30 AGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDCLSGKKIACLSYGSGPHVV 88
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 147
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + +
Sbjct: 148 EVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVD 198
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
G VY++G ++ + P +S L + V CG HT VLT G++Y WG
Sbjct: 199 TGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
+N G LG G+ P V + ++ +C HT+A G + WG
Sbjct: 259 ANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDCLSGKKIACLSYGSGPHVV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 23/289 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL LTE G VYA G N+ G
Sbjct: 103 MFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEG 162
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + P+ + ++ Q+S G + S+A+TVDG L+MWG NS GQ+GL K
Sbjct: 163 QLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGL--K 220
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ ++G G+LG L
Sbjct: 221 NVPNVCVPHQVTV--GKPIAWISCGYYHSAFVTMEGELYTFGETECGKLG-------LPR 271
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+L+ + +++A G H+ + E VY FG + +F+
Sbjct: 272 QLLMNHKVPQLVPGIPEKVIQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFIFETA 329
Query: 276 N-HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P K+ Y + CG HT ++T G +YT+G +G LG+G
Sbjct: 330 EPKILEPIKDQKIIY---ISCGENHTALITDVGLMYTFGDGRHGKLGLG 375
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 145/309 (46%), Gaps = 32/309 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
LACG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 85 LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVS-KPTCVKALKPEKVKFAACGRNH 143
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ +T +G++Y G N+ GQLGLG + P C FT KQ + G S
Sbjct: 144 TLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPI---CF---FTSQHQLKQLSAGSNTS 197
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G + WG G++G ++ + T G + + G+ H
Sbjct: 198 AALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTV-----------GKPIAWISCGYYH 246
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + G +Y FG+ K+ NH + P L+ +P +V CGG HT VLT
Sbjct: 247 SAFVTMEGELYTFGETECGKLGLPRQLLMNH-KVPQLVPGIPEKVIQVACGGGHTVVLTE 305
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
+YT+G + G LG+G+ + ++ P + + +SCG HTA I++ G + T+
Sbjct: 306 KA-VYTFGLGQFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLMYTF 364
Query: 365 GWGGSHGTF 373
G G HG
Sbjct: 365 G-DGRHGKL 372
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 14/75 (18%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P +CS F + ++ +ACGG H + V+AT
Sbjct: 364 FGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMI-------VFAT----- 411
Query: 101 GQLGISENIGYSLEP 115
+LGI+E I P
Sbjct: 412 PRLGIAEEIDEMYSP 426
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 22/282 (7%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDG-ELYMW 147
+Y+ G N FGQ + L P R+ ++ V+ +++G H AI G ++Y W
Sbjct: 98 IYSWGYNYFGQCASNSQSIIQL-PTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQLG G + + P P + + +FT + G + S+A++ G++ SWG G G
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPT-VFTS-VSCGAQHSMALSNYGELYSWGCGTGG 214
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
R GHG E+ L +P+++ L G ++ A G LHSA D G VY +G
Sbjct: 215 RTGHGSEAPSL---------SPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKY 265
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++ P+ + + + +V CG HT +LT+ G +Y++G N G LG+G
Sbjct: 266 GQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGY 325
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 366
P++V P E VD VS G+ HT ++ +G + +WG+
Sbjct: 326 ADSQQPKKVDLP--EHAVDIVS-GYYHTLCLTNKGNVYSWGY 364
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 124/287 (43%), Gaps = 16/287 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGC-VYATGLND 99
WG +G+ S P L+ A+A G +H L + G VYA G N
Sbjct: 101 WGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAWGCNR 160
Query: 100 FGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+GQLG + + P+ I+ +S G HS A++ GELY WG + G+ G G
Sbjct: 161 WGQLGTGDQTNRATPTPIAIA-TPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+A + P V L G A G S A G V +WG G+LG+ L
Sbjct: 220 SEAPSLSP--QVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHL 277
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+P ++++E V G H+ + G +Y FG ++ +
Sbjct: 278 ---------SPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADS 328
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++P + ++ ++V G YHT LT+ G +Y+WG +G LG+G I
Sbjct: 329 QQPKKVDLPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDI 375
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 41/273 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG + + P EKH + + CG HT LT G +Y+ G N GQ
Sbjct: 260 WGWNKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQ 319
Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ GY S +P ++ L + V I +GY+H+ +T G +Y WG S+G LGLG
Sbjct: 320 LGVG---GYADSQQPKKVD-LPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDI 375
Query: 161 A-----AKVIPIP-----------------------TKVECLSGIFTKQAALGFEQSVAV 192
A K+IP+ T G ++ A G S +
Sbjct: 376 AGHQSKPKLIPLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKIAAGAWNSAII 435
Query: 193 TGGGKVLSWGAGGSGRLGHG---QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
T GK+ +G G S R+G+G ++ I ++S +LI+ V+ K + +
Sbjct: 436 TTSGKLYCFGFGDSYRIGNGTNTEDQDIPCQVKSDEWGIEKLIQ----VEPKSSIDQIFN 491
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S I+ + + ++ NH + S
Sbjct: 492 SISINNTDKKKRSNGNSNSNIITDRNNHKTKSS 524
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GR G GS P V SA + ++A G H+ G VY G N +GQ
Sbjct: 208 WGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQ 267
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--- 158
LG + L P ++ ++K VV+++ G +H+ +T +G +Y +G N GQLG+G
Sbjct: 268 LG-NNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYA 326
Query: 159 -KKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG------ 210
+ K + +P V+ +SG + ++ +T G V SWG G LG
Sbjct: 327 DSQQPKKVDLPEHAVDIVSGYY---------HTLCLTNKGNVYSWGYMSDGALGLGDIAG 377
Query: 211 HGQESSILGFLRSTSEYTPRL-----IKEL--EGVKVKIA--------AAGFLHSACIDE 255
H + ++ Y+ + I E EG + A AAG +SA I
Sbjct: 378 HQSKPKLIPLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKIAAGAWNSAIITT 437
Query: 256 NGRVYIFG 263
+G++Y FG
Sbjct: 438 SGKLYCFG 445
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGTHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P I L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNCSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGTH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PAQSNKPLSIGALKNLGVVYISCGDEHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ P + L + + G E + +T GKV ++G SG+LG+
Sbjct: 213 LALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I + A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENI-GYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2478
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 160/355 (45%), Gaps = 34/355 (9%)
Query: 25 GICKRWISSTLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH 82
G C R SS +R +W G YG LG +R + FE + +A G H
Sbjct: 219 GSCLRACSSFHERE---VWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEH 275
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAIT 139
T+ L TG VY G ND GQ G ++ +G L + I G +K V V G H+ +
Sbjct: 276 TVLLCSTGEVYTAGYNDNGQCGQGTTQRVGV-LTRVPIDGGRKAVQVHAYNGCEHTLVVL 334
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG++ +G N GQLG G +++ P+P V L+GI QA+ + SV G+V
Sbjct: 335 DDGQMMSFGYNYRGQLGQGNTSSE--PVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVY 392
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G+LG G P L++ L G ++ A G H+ V
Sbjct: 393 TFGRNDFGQLGSGD---------VIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGV 443
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
G ++ + R+ + KL ++ V CG YHT VLT+ ++ +G N+
Sbjct: 444 QSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRND 503
Query: 317 NGCLGIGSIDVLHSPERVQGPF-----SESPVDQVSCGWKHTAAI-SEGKILTWG 365
G LG+G H+ +RV GP E V ++S G HT I ++G + +G
Sbjct: 504 YGQLGLG-----HTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFG 553
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 4/156 (2%)
Query: 44 GNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G DYG+LGL S ES+ + V V + ++ + CG HT+ LT V+ G ND+GQ
Sbjct: 447 GKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQ 506
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ P I G + K V +IS G +H+ I DG L+++G+N +GQLG G
Sbjct: 507 LGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTN 566
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ P P V G + A GF ++ +TGG K
Sbjct: 567 ERHSPFP--VSTFLGKRIAKVAAGFYHTIVLTGGDK 600
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D+G+LG G + R P + + + LACG HT+ T V + G ND+GQ
Sbjct: 394 FGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQ 453
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ E+ + + + G +V + GY+H+ +T + ++ +G+N GQLGLG
Sbjct: 454 LGL-ESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHT 512
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+V PT +E + + G +V + G + +G G+LG G
Sbjct: 513 TQRVFG-PTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGD------- 564
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ ++P + G ++ AAGF H+ +
Sbjct: 565 --TNERHSPFPVSTFLGKRIAKVAAGFYHTIVL 595
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 118/269 (43%), Gaps = 13/269 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LG G+ S P + +C H++ + G VY G NDFGQ
Sbjct: 342 FGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQ 401
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + I L P + L+ + + ++ G +H+ T++ + GKN GQLGL
Sbjct: 402 LGSGDVIDRKL-PCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTE 460
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ + K + L G + G+ ++ +T V +G G+LG G + +
Sbjct: 461 SQRKFVAVKGK-LDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRV--- 516
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P +I+ + V +AG H+ ID +G +++FG ++ + N P
Sbjct: 517 -----FGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSP 571
Query: 282 SLISKL--PYSEEVVCGGYHTCVLTSGGE 308
+S +V G YHT VLT G +
Sbjct: 572 FPVSTFLGKRIAKVAAGFYHTIVLTGGDK 600
>gi|194218802|ref|XP_001915749.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Equus caballus]
Length = 437
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 153/319 (47%), Gaps = 26/319 (8%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
LE P+ ++ + ++CG AH+L LT++ V++ G N +GQ G + EN YS
Sbjct: 132 LEPSPIPLPLDRPQETRVLQVSCGRAHSLILTDSEGVFSLGNNSYGQCGRKVVENEIYSE 191
Query: 114 --EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ R+ +VVQ++ G HS +T GE+Y G ++GQ GLG + P
Sbjct: 192 SHKVHRMRDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYSITSTPTMLGG 251
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ L+G+ Q A + +AV+ G + WG + + + ST PR
Sbjct: 252 D-LAGVNVVQVATYGDCCLAVSADGGLFGWG--------NSEYLQLASVTDSTQVNVPRC 302
Query: 232 IKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDK---MLFQEGNHARRPSLISKL 287
+ GV KVK AA G A ++E GRV+++G + K ++ PSL
Sbjct: 303 LP-FSGVGKVKQAACGGTGCAVLNEEGRVFVWGYGILGKGPNLVETALPEMIPPSLFGLT 361
Query: 288 PYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++ EV CG H LT+ GEL+ WG N GCLGIG ++ + P RV P P
Sbjct: 362 EFNPEVQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP--GEP 419
Query: 343 VDQVSCGWKHTAAISEGKI 361
VD V+CG H +++ I
Sbjct: 420 VD-VACGVDHMVTLAKSFI 437
>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
niloticus]
Length = 1384
Score = 115 bits (288), Expect = 4e-23, Method: Composition-based stats.
Identities = 95/303 (31%), Positives = 143/303 (47%), Gaps = 20/303 (6%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
K ++CGG H+ +TE G + G N +GQLG+ + +P + LK E V+++ G
Sbjct: 39 KHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPS-ARKPTSVKALKSEKVKLAACGR 97
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ T G +Y G N +GQLGLG + C K + G S A+
Sbjct: 98 DHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFC-DWAPIKMLSAGCNTSAAL 156
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G++ WG G++ G E GF PR + G V + G+ HSA
Sbjct: 157 TEDGRLFMWGDNSVGQIAFGDE----GFAAE-----PREVH--VGEAVIWVSCGYKHSAF 205
Query: 253 IDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+ GR+Y FG+ A ++ Q+ NH + L + V CGG HT VLT +
Sbjct: 206 VTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLGHVTRVCCGGEHTVVLTE-KNV 264
Query: 310 YTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
YT+G + G LG G+ + +H P+ +Q F S V ++CG HTA +++ +L G
Sbjct: 265 YTFGRGQYGQLGHGTFLFEVHLPKALQH-FCNSKVRHIACGENHTAVVTDSGLLYTFGDG 323
Query: 369 SHG 371
HG
Sbjct: 324 RHG 326
Score = 115 bits (288), Expect = 4e-23, Method: Composition-based stats.
Identities = 92/301 (30%), Positives = 145/301 (48%), Gaps = 32/301 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ + N+ P + +S G HS+ IT +G L
Sbjct: 9 IPETGAIFT-----FGRTSFANNV-----PSKFWLKNDHPKHMSCGGEHSAVITENGRLL 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
M+G N+ GQLGL K + PT V+ L K AA G + ++ T G V S G+
Sbjct: 59 MFGGNTWGQLGLRIKPSA--RKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQ 116
Query: 206 SGR--LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+ LGH +S+ LR ++ P +K+ +AG SA + E+GR++++G
Sbjct: 117 DGQLGLGHCDKSTYFHLLRPFCDWAP----------IKMLSAGCNTSAALTEDGRLFMWG 166
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
D +V ++ F + A P + V CG H+ +T G LYT+G + NG LG+
Sbjct: 167 DNSVGQIAFGDEGFAAEPREVHVGEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQ 226
Query: 324 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTFSEDG 377
+ + P++VQG V +V CG +HT ++E + T+G G HGTF +
Sbjct: 227 KEQLANHRVPQQVQGVLGH--VTRVCCGGEHTVVLTEKNVYTFGRGQYGQLGHGTFLFEV 284
Query: 378 H 378
H
Sbjct: 285 H 285
Score = 107 bits (266), Expect = 1e-20, Method: Composition-based stats.
Identities = 93/326 (28%), Positives = 147/326 (45%), Gaps = 28/326 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G +G+LGL S +P A + +K ACG HT+ T G VY+ G N G
Sbjct: 59 MFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQDG 118
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + LR + +S G + S+A+T DG L+MWG NS GQ+ G +
Sbjct: 119 QLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNSVGQIAFGDE 178
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P V G + G++ S VT G++ ++G +GRLG +E
Sbjct: 179 GFAAEPREVHV----GEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKE------ 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
+ + P+ ++ + G ++ G H+ + E VY FG ++ LF+
Sbjct: 229 -QLANHRVPQQVQGVLGHVTRVCCGG-EHTVVLTEKN-VYTFGRGQYGQLGHGTFLFE-- 283
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SP 331
P + S+ + CG HT V+T G LYT+G +G LG+G + ++ SP
Sbjct: 284 --VHLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSP 341
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS 357
F + V VSCG H ++
Sbjct: 342 TLCT-RFLQYAVQSVSCGGHHMLVLA 366
Score = 101 bits (251), Expect = 7e-19, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 141/267 (52%), Gaps = 17/267 (6%)
Query: 44 GNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G+ G+LGLG + S + ++ + +K L+ G + LTE G ++ G N GQ
Sbjct: 113 GSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNSVGQ 172
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ + G++ EP + + + V+ +S GY HS+ +TV G LY +G+++NG+LGL K+
Sbjct: 173 IAFGDE-GFAAEPREVH-VGEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQL 230
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V+ + G T+ G E +V +T V ++G G G+LGHG FL
Sbjct: 231 ANHRVPQQVQGVLGHVTR-VCCGGEHTVVLTEK-NVYTFGRGQYGQLGHGT------FLF 282
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+ P+ ++ KV+ A G H+A + ++G +Y FGD K+ E N +
Sbjct: 283 EV--HLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFS 340
Query: 281 PSLISK-LPYS-EEVVCGGYHTCVLTS 305
P+L ++ L Y+ + V CGG+H VL +
Sbjct: 341 PTLCTRFLQYAVQSVSCGGHHMLVLAT 367
>gi|7305093|ref|NP_038817.1| secretion-regulating guanine nucleotide exchange factor [Mus
musculus]
gi|38257405|sp|Q80YD6.2|SRGEF_MOUSE RecName: Full=Secretion-regulating guanine nucleotide exchange
factor; AltName: Full=Deafness locus-associated putative
guanine nucleotide exchange factor; Short=DelGEF;
AltName: Full=Guanine nucleotide exchange factor-related
protein
gi|6434206|emb|CAB60840.1| deafness locus associated putative guanine nucleotide exchange
factor [Mus musculus]
gi|110645832|gb|AAI19534.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|110645834|gb|AAI19535.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|127798601|gb|AAH49603.2| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|148690982|gb|EDL22929.1| secretion regulating guanine nucleotide exchange factor [Mus
musculus]
Length = 464
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 157/355 (44%), Gaps = 47/355 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE A AG HSA + + G +Y++G R L
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247
Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P I + +E V G H T G+++TWG + G LG L
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303
Query: 331 PE-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGW 366
PE QGP + P ++SCG +H A+ K +WGW
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW 358
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 148/336 (44%), Gaps = 37/336 (11%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E R +C ++ +ACG T+ LTE G V + G N FGQLG+
Sbjct: 79 GQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK---NSNGQLGLGKKAAKVI 165
+ P I L+++VV ++ G H+ A T G ++ WG +S +L G+ +
Sbjct: 139 PRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFL 198
Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P++V L A G + S ++T G++ W GR HGQ +S FL
Sbjct: 199 TAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVW-----GRNKHGQLASRAVFLP- 252
Query: 224 TSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG----------------DR 265
P+ I+ + KV +G+ H E G+V+ +G +
Sbjct: 253 ----LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308
Query: 266 AV--DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V D L +G PS + L + E+ CG H + + +WG NE+G G G
Sbjct: 309 PVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIR-DKCCSWGWNEHGMCGDG 367
Query: 324 SIDVLHSPERVQG-PFSESPVDQVSCGWKHTAAISE 358
+ + +P VQ P S S + V CG H+ A+ +
Sbjct: 368 TESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
+ + L N A+ PS ++ L S V V G H+ LT GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 319 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
L ++ L P+R++ F + V V GW H A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 101/243 (41%), Gaps = 25/243 (10%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
E G+V G A ++ G P I L E+VVC G H T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175
Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
WG S C G + P RV G + + V V+ G H+A++++ G++
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELY 234
Query: 363 TWG 365
WG
Sbjct: 235 VWG 237
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 240
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 366 WGGSHG 371
G HG
Sbjct: 359 -DGRHG 363
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 20/122 (16%)
Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
+ +I AGF + + + G V+ FG K F E ++ SK + ++
Sbjct: 29 QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG HT ++T +LY +GSN G LG+GS + P ++ V +CG
Sbjct: 77 CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRN 135
Query: 352 HT 353
HT
Sbjct: 136 HT 137
>gi|74219054|dbj|BAE26671.1| unnamed protein product [Mus musculus]
Length = 464
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 157/355 (44%), Gaps = 47/355 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE A AG HSA + + G +Y++G R L
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247
Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P I + +E V G H T G+++TWG + G LG L
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303
Query: 331 PE-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGW 366
PE QGP + P ++SCG +H A+ K +WGW
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW 358
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 148/336 (44%), Gaps = 37/336 (11%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E R +C ++ +ACG T+ LTE G V + G N FGQLG+
Sbjct: 79 GQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK---NSNGQLGLGKKAAKVI 165
+ P I L+++VV ++ G H+ A T G ++ WG +S +L G+ +
Sbjct: 139 PRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFL 198
Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P++V L A G + S ++T G++ W GR HGQ +S FL
Sbjct: 199 TAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVW-----GRNKHGQLASRAVFLP- 252
Query: 224 TSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG----------------DR 265
P+ I+ + KV +G+ H E G+V+ +G +
Sbjct: 253 ----LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308
Query: 266 AV--DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V D L +G PS + L + E+ CG H + + +WG NE+G G G
Sbjct: 309 PVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIR-DKCCSWGWNEHGMCGDG 367
Query: 324 SIDVLHSPERVQG-PFSESPVDQVSCGWKHTAAISE 358
+ + +P VQ P S S + V CG H+ A+ +
Sbjct: 368 TESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
+ + L N A+ PS ++ L S V V G H+ LT GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 319 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
L ++ L P+R++ F + V V GW H A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 101/243 (41%), Gaps = 25/243 (10%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
E G+V G A ++ G P I L E+VVC G H T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175
Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
WG S C G + P RV G + + V V+ G H+A++++ G++
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELY 234
Query: 363 TWG 365
WG
Sbjct: 235 VWG 237
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA L S C+++
Sbjct: 223 TP----------VRVAA---LQSVCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG GS + L SP + E V+ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMVE-KERVVEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
TP ++ E E V V+IAA H SA + G VY++G
Sbjct: 276 -------PTPIMV-EKERV-VEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S+N S P+ + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNLLSPTPIMVE--KERVVEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P I+ L
Sbjct: 199 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE-KDRIIEIAACH 317
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G V+ +G A ++ N
Sbjct: 80 LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137
Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS ++ EV CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 138 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197
Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGS 369
V G ++CG A ++ G++ WG+ G+
Sbjct: 198 VTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGN 234
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1131
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 152/333 (45%), Gaps = 33/333 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A + + +ACG H +T +G +Y+ G ++
Sbjct: 336 WGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNL 395
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P R++G + V I+ G H++ +T G L+ +G + G LG
Sbjct: 396 GLLGHGNDISHWI-PKRVNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHN 454
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 455 DR--KSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEK 512
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + L P + L + A G+ + + G V+ G
Sbjct: 513 GRLGHGDKEQRL---------VPTCVAALVDHNFRQVACGYSLTVALTTKGGVFTMGSST 563
Query: 267 VDKMLFQEGNHARRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + P L+ KL Y E++ CG +H VLT E+YTWG NG LG G
Sbjct: 564 YGQLGDPQAD-GKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLGHG 622
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
++ ++P V+ E V ++CG TAAI
Sbjct: 623 DLEDRNTPTLVEA-LKEKQVKSIACGATFTAAI 654
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 148/317 (46%), Gaps = 32/317 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ +ACGG H +T+ G V+ G G+LG + S P + L + ++
Sbjct: 313 DVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVS-HPQLVEALASSTTEVVAC 371
Query: 131 GYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFE 187
G +H+ A+T+ G+LY WG ++ G LG G + IP +V L G+ A G
Sbjct: 372 GEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHW--IPKRVNGPLEGLRVASIACGPW 429
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ VT G + ++G G G LGH S Y+PR ++ L+G++ AA G
Sbjct: 430 HTALVTTTGLLFTFGDGTFGVLGHNDRKSA---------YSPREVESLKGLRTVRAACGV 480
Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
H+A + E +G+++ +GD ++ + P+ ++ L +V
Sbjct: 481 WHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQV 540
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG T LT+ G ++T GS+ G LG D P V+G E+ V+ ++CG H
Sbjct: 541 ACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADG-KLPGLVEGKLVEAYVEDIACGAHHV 599
Query: 354 AAISEG-KILTWGWGGS 369
A ++ ++ TWG G +
Sbjct: 600 AVLTHNSEVYTWGKGAN 616
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 31/270 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V I+ G H++ +T GE++ WG+ S G+LG G + P VE
Sbjct: 304 KPLE-SALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD--VSHPQLVEA 360
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ T+ A G + AVT G + SWG G G LGHG + S + P+
Sbjct: 361 LASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGND---------ISHWIPKR 411
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG++V A G H+A + G ++ FGD + + A P + L
Sbjct: 412 VNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGL 471
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ CG +HT + G+L+TWG E G LG G + P V
Sbjct: 472 RTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAA 531
Query: 337 PFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ QV+CG+ T A+ ++G + T G
Sbjct: 532 -LVDHNFRQVACGYSLTVALTTKGGVFTMG 560
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 41/264 (15%)
Query: 131 GYHHSSAITVDGELYMWGKNSNG--------QLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
G H++ + G++YMWG+ ++G G +P +E + +
Sbjct: 261 GLHYAEPL---GDVYMWGEGVGDGILGGGIHRIGSGGAINLDALLPKPLESALVLDVQLI 317
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + + VT G+V +WG GRLGHG + + P+L++ L ++
Sbjct: 318 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDV---------SHPQLVEALASSTTEV 368
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCG 296
A G H+ + +G +Y +GD + L GN P ++ P + CG
Sbjct: 369 VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLEGLRVASIACG 427
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+HT ++T+ G L+T+G G LG +SP V+ V + +CG HTAA+
Sbjct: 428 PWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTV-RAACGVWHTAAV 486
Query: 357 SE-------------GKILTWGWG 367
E GK+ TWG G
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDG 510
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 152/340 (44%), Gaps = 30/340 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3213 KLGHGNRTTLD-KPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3271
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ ++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3272 STQLKP--KLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3324
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3325 ----SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3380
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I+ L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3381 RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3440
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
V++V+CG H+ A WG + T E+
Sbjct: 3441 -LDAVFVNRVACGSSHSIA----------WGLPNATLEEE 3469
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4241 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4298
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4299 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4357
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4358 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4411
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI+++ V+ +GD K+
Sbjct: 4412 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKL----- 4461
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 4462 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4519
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4520 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWG 4558
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4327 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 4384
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4385 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 4442
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4443 CINDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4493
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4494 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4553
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4554 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4605
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3206 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3265
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3266 LGHGDN-STQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3324
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3325 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3380
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3381 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3431
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3432 NKKPALVIGLDAVFVNRVACGSSHS 3456
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 23/302 (7%)
Query: 79 GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ + G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3135 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3193
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3194 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG S ++ P+L+ L G +V A G +
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNS---------TQLKPKLVAALAGRRVIQVACGSRDAQTLA 3302
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3303 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3362
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3363 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG-DND 3420
Query: 370 HG 371
HG
Sbjct: 3421 HG 3422
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + ++ +ACG AH+ +T +G V G +G+
Sbjct: 4347 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + I D ++ WG G+LG G
Sbjct: 4407 LGHGDSED-QLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG- 4464
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4465 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4521
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4522 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4574
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4575 RPRLVAALQGKHIVKVTCGSAHTLALST 4602
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 132/316 (41%), Gaps = 46/316 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
K ++ + C + L L+E G +Y + EP + + E + +S
Sbjct: 575 KFQVQQIVCSESIVLILSEDGKLYNWRM-----------FKPETEPQLLEEIAHETI-VS 622
Query: 130 TGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQ 181
H H AI ++ Y WG + +LG G A+ +P TK+ C+ +F
Sbjct: 623 IASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVP--TKITLLDRCVKAVFC-- 678
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S A+T G + +WG G RLGHG S + P ++ L ++
Sbjct: 679 ---GCSYSAAITCSGNLYTWGRGTYARLGHGN---------SDDQPLPTVVMALTEHEII 726
Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
A +G HS C+ G VY +GD K+ N + P L+ LP + V G
Sbjct: 727 DVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQRVFAGAQF 786
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSESPVDQVSCGWKHTAA 355
+ LT+ G+LY+WG + CLG ++ P + G + VD V+ G H A
Sbjct: 787 SMALTTDGQLYSWG--KASCLGHQLVERSAQWCSVPRLISGLQHKRIVD-VAVGVAHCLA 843
Query: 356 ISE-GKILTWGWGGSH 370
+S G++ WG S
Sbjct: 844 LSSCGEVFGWGRNDSQ 859
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + + P V A +H + AL G AH+L LT G VYA G D+
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 754
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N+ S+ P+ + L K V ++ G S A+T DG+LY WGK S L ++
Sbjct: 755 GKLG-NGNLNGSMSPVLVESLPK-VQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVER 812
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+A+ +P + L A+G +A++ G+V WG S ++
Sbjct: 813 SAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQI 861
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R A WGNG+ RLG G +R P + ++ +KA+ CG +++ +T +G +Y G
Sbjct: 639 RNAYSWGNGEDHRLGHGDTHARAVPTKITLLDR-CVKAVFCGCSYSAAITCSGNLYTWGR 697
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
+ +LG + L + ++ + E++ ++ +G HS +T +G +Y WG G+L
Sbjct: 698 GTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKL 757
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P+ VE L + ++ G + S+A+T G++ SWG LGH
Sbjct: 758 GNGNLNGSMSPV--LVESLPKV--QRVFAGAQFSMALTTDGQLYSWGKASC--LGH---- 807
Query: 216 SILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ ++++ PRLI L+ ++ A G H + G V+ +G
Sbjct: 808 ---QLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWG 854
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 122/266 (45%), Gaps = 25/266 (9%)
Query: 134 HSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A +D +L +WG N QLG G K +KV +PT + +S + A G +
Sbjct: 3083 HGMAGALDQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSL 3140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
V GKV + G G +GRLG G ++ P + L VK A +G
Sbjct: 3141 FIVGQNGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGG 3191
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+ ++S
Sbjct: 3192 KHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKIL 362
GELYTWG E G LG G P+ V + V QV+CG + T A++E G +
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNSTQLKPKLVAA-LAGRRVIQVACGSRDAQTLALTEDGAVF 3310
Query: 363 TWGWG--GSHGTFSEDGHSSGGQLDR 386
+WG G G G +G + +++R
Sbjct: 3311 SWGDGDFGKLGRGGSEGSDTPHEIER 3336
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 117/302 (38%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4238 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4295
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4296 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4355
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4356 GHGNRMSY---------DRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T + +++WG + G LG G
Sbjct: 4407 LGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGS 4466
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 4467 DGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 4521
Query: 385 DR 386
R
Sbjct: 4522 RR 4523
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 163/359 (45%), Gaps = 28/359 (7%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I+ T ++ WG GRLG G+ E RP + + +
Sbjct: 248 LESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSN 307
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK--EVVQIS 129
++ +ACG HT +T +G +Y G + + IG S P R+SG + +V+ ++
Sbjct: 308 VEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVA 367
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS+ G+++ +G + G LG G + + + P +VE LSG T + A G S
Sbjct: 368 CGSWHSALAMSSGKVFTFGDGTFGALGHGNR--ENVAYPKEVESLSGFRTMKVACGVWHS 425
Query: 190 VAV------TG----GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A+ TG K+ +WG G RLGHG + + L P +++ L
Sbjct: 426 AAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARL---------VPTVVQALVDNN 476
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
A G+ + + +G V+ G ++ + + + + KL EE+ CG
Sbjct: 477 FHQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGS 536
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
YH VLTS E+YTWG NG LG G I+ P V + V ++CG T I
Sbjct: 537 YHVAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDA-LKDRHVKSIACGSNFTTCI 594
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 138/315 (43%), Gaps = 32/315 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ ++CG H T G V+ G G+LG + S L S V I+ G
Sbjct: 256 VQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGE 315
Query: 133 HHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
H+ A+T G+LY WG S G LG G A+ +P +V L G+ A G S
Sbjct: 316 FHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLP--KRVSGPLEGLQVLSVACGSWHS 373
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
GKV ++G G G LGHG ++ P+ ++ L G + A G H
Sbjct: 374 ALAMSSGKVFTFGDGTFGALGHGNRENVA---------YPKEVESLSGFRTMKVACGVWH 424
Query: 250 SACIDENG----------RVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVC 295
SA I E +++ +GD DK G+ R P+++ L + +V C
Sbjct: 425 SAAIVETTSQTGVNMVSRKLFTWGDG--DKNRLGHGDKEARLVPTVVQALVDNNFHQVAC 482
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G T L + G ++T GS+ G LG D P +VQ S V+++SCG H A
Sbjct: 483 GYSMTIALATSGHVFTMGSSNYGQLGNPKADG-KQPCQVQDKLSSELVEEISCGSYHVAV 541
Query: 356 I-SEGKILTWGWGGS 369
+ S ++ TWG G +
Sbjct: 542 LTSRSEVYTWGMGAN 556
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 33/248 (13%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S G L V+ IP +E + +Q + G T
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVCSKTDVL-IPKPLESDVVLDVQQISCGSRHIALTTRQ 272
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG + I P+L++ L V+ A G H+ +
Sbjct: 273 GEVFTWGEELGGRLGHGTDEDI---------SRPKLVESLAVSNVEYIACGEFHTCAVTA 323
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G +Y +GD + + L G A P +S +V+ CG +H+ + S G+++
Sbjct: 324 SGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVF 383
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG----------- 359
T+G G LG G+ + + P+ V+ S +V+CG H+AAI E
Sbjct: 384 TFGDGTFGALGHGNRENVAYPKEVES-LSGFRTMKVACGVWHSAAIVETTSQTGVNMVSR 442
Query: 360 KILTWGWG 367
K+ TWG G
Sbjct: 443 KLFTWGDG 450
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 180/361 (49%), Gaps = 25/361 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLND 99
WGN G LGLG +E + P FE +++K++ACG HTL +TE G +YA G ND
Sbjct: 4 WGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSND 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FGQLG + G + +I G++ V+ ++ G HS A+ G+LY WG +S GQLGL
Sbjct: 64 FGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLE 120
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L+ + Q + G++ +A+T G++ +WG+ G+LG G +
Sbjct: 121 TDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNV 179
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P L+ L G+ + A G HS + ++G V+ +G ++
Sbjct: 180 S--------KPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL 231
Query: 279 RRPSLISKL-PYSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P+ + + + + GG V LT G ++T G+ G LG GS P +V
Sbjct: 232 SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVL- 290
Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWG--GSHGTFSEDGHSSGGQLDRGQ-LTP 391
S V QV+CG +HT + S+G++ ++G G G GT S +S+ QL G L+P
Sbjct: 291 ELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSS-INSNTPQLVLGPWLSP 349
Query: 392 S 392
S
Sbjct: 350 S 350
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 22/250 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV---ECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+Y WG NG+LGLG I P ++ E ++ I K A G ++AVT G++ +
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNI--KSVACGNNHTLAVTEDGQLYA 58
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G+ G+LGH + L + I +E + + A G HS ++E G++Y
Sbjct: 59 CGSNDFGQLGHDGCRTKL-----------QKIPGVESLVMTSVACGEAHSMALNEWGQLY 107
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+G + ++ L + +P ++ L ++ CG H LT+ GELYTWGSNE
Sbjct: 108 TWGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEF 167
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG--GSHGTFS 374
G LG+G S + P+ ++CG H+ +S+ G + WG G G S
Sbjct: 168 GQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINS 227
Query: 375 EDGHSSGGQL 384
+ SS QL
Sbjct: 228 QTSLSSPAQL 237
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 162/361 (44%), Gaps = 32/361 (8%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I+ T ++ WG GRLG G+ RP + A +
Sbjct: 249 LESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSN 308
Query: 73 LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
++ +ACG HT +T +G +Y G + G LG + L P R+SG + +V+ +
Sbjct: 309 VEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWL-PKRVSGPLEGVQVLSV 367
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS+ T G+++ +G + G LG GK+ + + P +VE LSG T + A G
Sbjct: 368 SCGSWHSALTTSSGKVFTFGDGTFGALGHGKR--ETVGYPKEVEALSGFRTMKVACGLWH 425
Query: 189 SVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ K+ +WGAG +LGHG + S L P ++ L
Sbjct: 426 SAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRL---------VPTCVQSLIDY 476
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVC 295
A G + + +G V+ G + + L + ++P + EE+ C
Sbjct: 477 SFHQVACGHSMTIALSTSGHVFTMGSSS-NGQLGNPKSDGKQPIPVQDRLSGELVEEISC 535
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H VLTS E+YTWG NG LG G ++ P V+ + V ++CG T
Sbjct: 536 GSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEA-LKDRHVKSIACGSNFTTC 594
Query: 356 I 356
I
Sbjct: 595 I 595
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 141/313 (45%), Gaps = 28/313 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +ACG H T G V+A G G+LG + S L + V I+ G
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGE 316
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
H+ A+T G+LY WG LG A +P +V L G+ + G S
Sbjct: 317 FHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSAL 376
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T GKV ++G G G LGHG+ ++ G+ P+ ++ L G + A G HSA
Sbjct: 377 TTSSGKVFTFGDGTFGALGHGKRETV-GY--------PKEVEALSGFRTMKVACGLWHSA 427
Query: 252 CIDENG----------RVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGG 297
I E+ ++Y +G A DK G+ R P+ + L YS +V CG
Sbjct: 428 AIVESSNHVSINVISRKLYTWG--AGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGH 485
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
T L++ G ++T GS+ NG LG D P VQ S V+++SCG H A +
Sbjct: 486 SMTIALSTSGHVFTMGSSSNGQLGNPKSDG-KQPIPVQDRLSGELVEEISCGSCHVAVLT 544
Query: 357 SEGKILTWGWGGS 369
S ++ TWG G +
Sbjct: 545 SRSEVYTWGMGAN 557
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 35/249 (14%)
Query: 142 GELYMWGK------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ + G L KA +IP P + + + + +Q A G+ T
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLCSKADILIPKPLESDVVLDV--QQIACGYRHIALTTR 272
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG ++ I P+L++ L V+ A G H+ +
Sbjct: 273 QGEVFAWGEELGGRLGHGTDADI---------SRPKLVEALAVSNVEYIACGEFHTCAVT 323
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGEL 309
+G +Y +GD + L G A P +S +V+ CG +H+ + TS G++
Sbjct: 324 ASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKV 383
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG---------- 359
+T+G G LG G + + P+ V+ S +V+CG H+AAI E
Sbjct: 384 FTFGDGTFGALGHGKRETVGYPKEVEA-LSGFRTMKVACGLWHSAAIVESSNHVSINVIS 442
Query: 360 -KILTWGWG 367
K+ TWG G
Sbjct: 443 RKLYTWGAG 451
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
Length = 863
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 149/338 (44%), Gaps = 45/338 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG H+ +T++G +Y G ++F
Sbjct: 147 WGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNF 206
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG NI + P R+ G + V ++ G H+ +T G+L+ +G + G LG G
Sbjct: 207 GLLGHGNNISH-WTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHG 265
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------------GGKVLSWGAGGS 206
+ K +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 266 DR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDK 323
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
RLGHG + L P + L + A G + + G +Y G +
Sbjct: 324 NRLGHGDKEQKL---------VPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVS 374
Query: 267 VDKMLFQEGNHARRPSLISKLP--------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++ G+ P +LP EEV CG YH LTS G++ TWG NG
Sbjct: 375 YGQL----GD----PQATGRLPGVLRLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANG 426
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
LG G + P V+ + V +VSCG T+AI
Sbjct: 427 RLGHGDAEDRDVPSLVEA-LRDKQVKKVSCGSSFTSAI 463
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 149/322 (46%), Gaps = 46/322 (14%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACG H +T G V++ G G+LG + ++ + P I L VQ ++
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAH---PQLIDSLASSTVQYVA 181
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
G +HS A+T G+LY WG ++ G LG G + P L G+ A G
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGP-LEGVRVSSVACGPW 240
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+V VT G++ S+G G G LGHG S PR ++ L+G+K AA G
Sbjct: 241 HTVLVTSTGQLFSFGDGTFGVLGHGDRKSA---------SMPREVESLKGLKTLRAACGP 291
Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
H+A + E +G+++ +GD +++ + P+ ++ L +V
Sbjct: 292 WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFS--ESPVDQVSC 348
CG T LT+ G LYT GS G LG P+ R+ G + +++VSC
Sbjct: 352 ACGHSLTVALTTTGHLYTMGSVSYGQLG--------DPQATGRLPGVLRLGRTLIEEVSC 403
Query: 349 GWKHTAAI-SEGKILTWGWGGS 369
G H AA+ S+G + TWG G +
Sbjct: 404 GAYHVAALTSKGDVCTWGKGAN 425
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
V GEL+MWG+ G K +P V L + +Q A G + VT G
Sbjct: 83 VFGELWMWGEGIGDGGGTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHAALVTRQG 142
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V SWG GRLGHG ++ + P+LI L V+ A G HS + ++
Sbjct: 143 EVFSWGEESGGRLGHGVDADVA---------HPQLIDSLASSTVQYVACGEYHSCAVTQS 193
Query: 257 GRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
G +Y +GD + L GN+ +R + V CG +HT ++TS G+L++
Sbjct: 194 GDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFS 253
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------- 358
+G G LG G P V+ + +CG HTAA+ E
Sbjct: 254 FGDGTFGVLGHGDRKSASMPREVES-LKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLS 312
Query: 359 GKILTWGWG 367
GK+ TWG G
Sbjct: 313 GKLFTWGDG 321
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 69 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 128
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 129 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 185
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 186 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 235
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 236 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 293
Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
P ++ K E C HT T GG +Y WG + + + S + V F
Sbjct: 294 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 353
Query: 339 SESPV 343
+ V
Sbjct: 354 ATPAV 358
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 19/289 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 52 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 110
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 169
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ PR + KV + A G + S + G V+
Sbjct: 170 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 220
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++G ++ + P ++ L + V CG HT VLT G++Y WG+N G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
LG G+ P V + ++ +C HT+A G + WG
Sbjct: 281 QLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 328
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG ++ + TG V+ G N G
Sbjct: 169 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 228
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 229 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 287
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ + P P VE I A S A T GG V WG G S L H
Sbjct: 288 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 339
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 55 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIV 105
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ N P IS +++V+ CG YH+ VLTS GE
Sbjct: 106 LATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGE 165
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A ++ G++ WG+
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYN 225
Query: 368 GS 369
G+
Sbjct: 226 GN 227
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 281 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 329
>gi|242021219|ref|XP_002431043.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
gi|212516272|gb|EEB18305.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
Length = 369
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 161/332 (48%), Gaps = 36/332 (10%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G GD G+LGLG S+ R +P + E ++ + GG HT+ L++ G VY G +D G
Sbjct: 46 FGQGDVGQLGLGTSITERGKPSLVKTLE--NIVDVCAGGMHTVCLSKDGVVYTFGCDDEG 103
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG S EP ++ L VQI+ G HS+A+ DG ++ WG ++S+G +GL
Sbjct: 104 ALGREATDENSFEPGQVC-LPGSAVQITAGDSHSAALLDDGRVFAWGSFRDSHGAMGLTV 162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + PI + L + A G + V +T G++ + G G+LG
Sbjct: 163 QGKEKRPI----QLLQDKVITKIASGADHLVMLTFDGQLYTCGCAEQGQLG--------- 209
Query: 220 FLRSTSEYTPRLIKE------LEGVKV--KIAAAGFL--HSACIDENGRVYIFGDRAVDK 269
R ++ ++ R ++ L G + K + F+ H+ +DENG+VY+ G + +
Sbjct: 210 --RVSNRFSSRESRQGLSHLLLPGRILFNKRSKYDFIDHHTMALDENGKVYVLGRKDYGR 267
Query: 270 M-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ L + A+ +L+S L E ++ CG + +T G Y WG NG LG+G D
Sbjct: 268 LGLGKNCEDAKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGMGSNGQLGMGDDD 327
Query: 327 V-LHSPERVQGPFSE-SPVDQVSCGWKHTAAI 356
+ P ++ G E V VS G +HT +
Sbjct: 328 SDIFEPSKILGKQLEGKNVHLVSAGGQHTVLL 359
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
+PSL+ L +V GG HT L+ G +YT+G ++ G LG + D +S E Q
Sbjct: 65 KPSLVKTLENIVDVCAGGMHTVCLSKDGVVYTFGCDDEGALGREATDE-NSFEPGQVCLP 123
Query: 340 ESPVDQVSCGWKHTAA-ISEGKILTWG-WGGSHGTF 373
S V Q++ G H+AA + +G++ WG + SHG
Sbjct: 124 GSAV-QITAGDSHSAALLDDGRVFAWGSFRDSHGAM 158
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 127 QISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+IS +IT + G + +G+ GQLGLG + P+ V+ L I G
Sbjct: 25 RISIVRDEKPSITKIPGLVLTFGQGDVGQLGLGTSITERGK-PSLVKTLENIV--DVCAG 81
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+V ++ G V ++G G L G+E++ + + P + L G V+I A
Sbjct: 82 GMHTVCLSKDGVVYTFGCDDEGAL--GREAT------DENSFEPGQVC-LPGSAVQI-TA 131
Query: 246 GFLHSACIDENGRVYI---FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
G HSA + ++GRV+ F D L +G +RP + + ++ G H +
Sbjct: 132 GDSHSAALLDDGRVFAWGSFRDSHGAMGLTVQGKE-KRPIQLLQDKVITKIASGADHLVM 190
Query: 303 LTSGGELYTWGSNENGCLG 321
LT G+LYT G E G LG
Sbjct: 191 LTFDGQLYTCGCAEQGQLG 209
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 53 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 173 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 225
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 226 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 280
Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
P LI + + ++ CG YHT V T+G
Sbjct: 281 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 312
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 31 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 88
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 199
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 200 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
G+++T+G G S + HSP +G P V Q+ CG HT A
Sbjct: 259 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 307
Query: 356 -ISEGKILTWGWGGS 369
+ G++++ G G S
Sbjct: 308 VYTTGQVVSLGRGPS 322
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 104 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 163
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 164 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 224 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 279
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++E +G+ +AA G S+ + +V S G G+LG S
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 69
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
P I+ L V + + + G HS + GRV+ +G + ++ E + P+ I+
Sbjct: 70 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 129
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
L + +V CG YH+ L+ G++++WGSN G LG+G ++ SP++V+ P+
Sbjct: 130 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 188
Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQL 384
QV+ G H+ A+S ++GWG + G + G+S+ Q+
Sbjct: 189 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI 229
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 163/354 (46%), Gaps = 31/354 (8%)
Query: 33 STLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ L R A L WG+G+ G+LG+G + + +A + +++ A+ G ++L + + G
Sbjct: 2 APLPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGR 61
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKN 150
++ G N G LG P + L ++VQ + G H A+ G Y WG N
Sbjct: 62 LFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGN 121
Query: 151 SNGQLGL-------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
GQ G G +A + IPT C + +Q A G SV +T G V +WG
Sbjct: 122 EYGQCGEEPERKEDGTRALRR-DIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWG- 179
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G ++ S TP ++ LE KV + A G H+ + E+ ++ +G
Sbjct: 180 ----------QPWPPGDIKQIS--TPVRVQGLE--KVMMIAVGAFHNLALSEDAVLWAWG 225
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ ++ + +P + L ++ GG+H+ LT GE+Y WG E+G LG
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLG 285
Query: 322 IGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
G H P +VQ E V QVSCG H+ A+ S+G+I ++G G HG
Sbjct: 286 FGDDKSSHMVPLKVQLLDGEDIV-QVSCGGTHSVALTSDGRIFSYG-RGDHGRL 337
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 127/297 (42%), Gaps = 11/297 (3%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGEL 144
L V A G + GQLG+ R++ L V + G +S AI DG L
Sbjct: 4 LPRPAAVLAWGSGEDGQLGMG-GCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRL 62
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG + K P VE L+G+ QAA+G +AV G+ +WG
Sbjct: 63 FTWGWNQRGTLGHPPET-KTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGN 121
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+ G E G R+ P + +KV+ AAG HS + + G V+ +G
Sbjct: 122 EYGQCGEEPERKEDG-TRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWGQ 180
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ Q P + L + G +H L+ L+ WG+NE G LGIG
Sbjct: 181 PWPPGDIKQ----ISTPVRVQGLEKVMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGD 236
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHS 379
P RV+G S VD + GW TA +G++ WG G HG F +D S
Sbjct: 237 TQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWG-RGEHGRLGFGDDKSS 292
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 5/154 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV EK + +A G H L L+E ++A G N++GQLGI + S +P+R+ GL
Sbjct: 193 PVRVQGLEK--VMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRS-QPIRVEGL 249
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T DGE+Y WG+ +G+LG G + + +P KV+ L G
Sbjct: 250 SGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHM-VPLKVQLLDGEDIV 308
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 309 QVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRK 342
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG+G + R +P+ SL +A GG H+ LT+ G VYA G + G+
Sbjct: 224 WGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGR 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + PL++ L +++VQ+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 284 LGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKV 343
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK----VLSW 201
P+ + L T G Q+ V GG+ +++W
Sbjct: 344 TTGHPMEVPLN-LPPPKTSAGPDGLWQANFVACGGRHTLAIVTW 386
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 145/327 (44%), Gaps = 21/327 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+ G G+ S PV ++ A+A H+L LT G V A G N FGQ
Sbjct: 60 WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQ 119
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG P+R+ + V I+ G HS AIT G ++ WG N+ GQLG G
Sbjct: 120 LGDGTTASSRTPVPVRLP-VGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTT 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+P ++ G A G S+AV G L+WG+ G+LG G
Sbjct: 179 DSSLPVPVRLPV--GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGT-------- 228
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP + +L V AAG +HS + G VY +G + ++ + + P
Sbjct: 229 -TTGSSTPITVPQLP--TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTP 285
Query: 282 SLISKLP---YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ ++P + VV G H+ LT+ G WG N G LG G+ +P V+ P
Sbjct: 286 IAV-RVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPG 344
Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTW 364
+ + V+ H A+ S L W
Sbjct: 345 GAT-LTAVAIHRDHAVAVTSTATALAW 370
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
T + A G N FGQ G P+R+ + V I+ HS A+T G + W
Sbjct: 54 TDTILAWGDNSFGQFGNGTTASSRTPVPVRLP-VGTTVTAIAGSDTHSLALTSVGTVLAW 112
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G NS GQLG G A+ P+P ++ G A G S+A+T G V +WG G
Sbjct: 113 GGNSFGQLGDGTTASSRTPVPVRLPV--GTTVTAIAAGTSHSLAITATGAVFAWGDNAVG 170
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G +T P ++ G V A G HS + G +G A
Sbjct: 171 QLGDGT---------TTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAF 221
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
++ + P + +LP V G H+ LTS G +Y WG+N G LG GS
Sbjct: 222 GQLGDGTTTGSSTPITVPQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSD 281
Query: 328 LHSPERVQGP 337
+P V+ P
Sbjct: 282 SSTPIAVRVP 291
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 135/328 (41%), Gaps = 32/328 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ S PV ++ A+A G +H+L +T TG V+A G N GQ
Sbjct: 112 WGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQ 171
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG SL P+R+ + V I+ G HS A+ G WG N+ GQLG G
Sbjct: 172 LGDGTTTDSSLPVPVRLP-VGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTT 230
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
PI V L + A G S+A+T G V +WGA G+LG G S
Sbjct: 231 GSSTPI--TVPQLPTV--TAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTS------ 280
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP ++ G +G HS + G +GD ++ GN A
Sbjct: 281 ---DSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQL----GNGA--- 330
Query: 282 SLISKLPYSEEVVCGGY---------HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
++ S P + V G H +TS W N G LG G+ P
Sbjct: 331 TVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPV 390
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISEGK 360
V P + + V+ G H+ A+ + +
Sbjct: 391 AVSLPAGTA-ITAVAVGDDHSLALVDAQ 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 105/236 (44%), Gaps = 22/236 (9%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+ D + WG NS GQ G G A+ P+P ++ G A S+A+T
Sbjct: 49 TAAVATD-TILAWGDNSFGQFGNGTTASSRTPVPVRLPV--GTTVTAIAGSDTHSLALTS 105
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G VL+WG G+LG G + S TP ++ G V AAG HS I
Sbjct: 106 VGTVLAWGGNSFGQLGDGTTA---------SSRTPVPVRLPVGTTVTAIAAGTSHSLAIT 156
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVLTSGGELYT 311
G V+ +GD AV ++ + P + +LP V + GG H+ + S G
Sbjct: 157 ATGAVFAWGDNAVGQLGDGTTTDSSLPVPV-RLPVGTTVTAIAGGLGHSLAVASTGATLA 215
Query: 312 WGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
WGSN G LG G+ +P V Q P V V+ G H+ A+ S G + WG
Sbjct: 216 WGSNAFGQLGDGTTTGSSTPITVPQLPT----VTAVAAGDVHSLALTSTGTVYAWG 267
>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1193
Score = 115 bits (287), Expect = 5e-23, Method: Composition-based stats.
Identities = 108/374 (28%), Positives = 168/374 (44%), Gaps = 58/374 (15%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---------ACGGAHTLFLTETG 90
A WG+ YGRLG G+ R PV+ ++ + L + G ++L + G
Sbjct: 696 AYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDYYSLAVGSDG 755
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITV 140
VYA G N +GQLG + + S P+R+ GLK +Q+S G +HS A+
Sbjct: 756 YVYAWGYNSYGQLG-NNSTSSSYVPVRVRDPASPNDASKGLK--AIQVSAGDYHSLALGS 812
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTK-----VECLSGIFTKQAALGFEQSVAVTGG 195
DG Y WG S G+LG +++ +P+ + + G+ Q + G S+AV
Sbjct: 813 DGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSD 872
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G +WG G G+LG+ SS +R +P +G+K +AG+ HS +
Sbjct: 873 GYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASP--TDTSKGLKAAQISAGYGHSLAVGS 930
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR-------------RPSLISKLPYSEEVVCGGYHTCV 302
+G Y +G ++ Q GN++ PS SK + +V G H+
Sbjct: 931 DGYAYAWG---LNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLA 987
Query: 303 LTSGGELYTWGSNENGCLGI-GS-------IDVLHSPERVQ--GPFSESPVDQVSCGWKH 352
+ G Y WG N+NG LGI GS + VL S + GP+ + Q++ G H
Sbjct: 988 VDKDGNAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAV--QITAGDHH 1045
Query: 353 TAAI-SEGKILTWG 365
+ AI ++G WG
Sbjct: 1046 SLAIGTDGNTKAWG 1059
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 91/336 (27%), Positives = 146/336 (43%), Gaps = 43/336 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-----VCSAFEKHSLKAL--ACGGAHTLFLTETGCVYAT 95
WG YG+LG S S + PV LKA+ + G H+L L G YA
Sbjct: 760 WGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVSAGDYHSLALGSDGYAYAW 819
Query: 96 GLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITVDGELY 145
G +G+LG + + S P+R+ GLK Q+S G +HS A+ DG Y
Sbjct: 820 GDGSYGKLG-NNSRSSSYVPVRVRDPDSPNDASKGLK--ATQVSAGQNHSLAVGSDGYAY 876
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTK-----VECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
WG S G+LG ++ +P+ + + G+ Q + G+ S+AV G +
Sbjct: 877 AWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSLAVGSDGYAYA 936
Query: 201 WGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
WG +LG+ S+ +R +P +G+K +AG HS +D++G
Sbjct: 937 WGLNDYYHQLGNNSSSNSSVPVRVRDPDSPS--DASKGLKATQVSAGQEHSLAVDKDGNA 994
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------------EVVCGGYHTCVLTSGG 307
Y +GD + L +G+ P + L ++ ++ G +H+ + + G
Sbjct: 995 YAWGDND-NGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAIGTDG 1053
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
WGSN +G LG G+ + +P V F+ PV
Sbjct: 1054 NTKAWGSNRDGRLGDGTTNTKWAP--VPVAFNLQPV 1087
Score = 85.1 bits (209), Expect = 5e-14, Method: Composition-based stats.
Identities = 80/263 (30%), Positives = 112/263 (42%), Gaps = 37/263 (14%)
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK------VECLSGIFT-KQAAL 184
Y S A+ DG Y WG NS G+LG G + P+ K L FT Q +
Sbjct: 684 YGFSLAVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSA 743
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+AV G V +WG G+LG+ SS +R +P +G+K +
Sbjct: 744 GDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPN--DASKGLKAIQVS 801
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-------------SKLPYSE 291
AG HS + +G Y +GD + K+ GN++R S + SK +
Sbjct: 802 AGDYHSLALGSDGYAYAWGDGSYGKL----GNNSRSSSYVPVRVRDPDSPNDASKGLKAT 857
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD------- 344
+V G H+ + S G Y WG G LG S P RV+ P SP D
Sbjct: 858 QVSAGQNHSLAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRVRDP--ASPTDTSKGLKA 915
Query: 345 -QVSCGWKHTAAI-SEGKILTWG 365
Q+S G+ H+ A+ S+G WG
Sbjct: 916 AQISAGYGHSLAVGSDGYAYAWG 938
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 39 FAALWGNGDY-GRLGLGSLESRWRPVVCSAFEKHS-----LKA--LACGGAHTLFLTETG 90
+A WG DY +LG S + PV + S LKA ++ G H+L + + G
Sbjct: 933 YAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLAVDKDG 992
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRI---------SGLKKEVVQISTGYHHSSAITVD 141
YA G ND GQLGI + P+++ +G VQI+ G HHS AI D
Sbjct: 993 NAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAIGTD 1052
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIP 168
G WG N +G+LG G K P+P
Sbjct: 1053 GNTKAWGSNRDGRLGDGTTNTKWAPVP 1079
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 174/411 (42%), Gaps = 83/411 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
WG G YG LG G + PV S +K ++ + G H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHS 264
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
+ T G ++ G G+LG+ N G SL P + L +++V ++ G HS+ I G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG G+LG G + IP+P KVE G+ Q A G ++A+T G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG + G G++ S G + + P+ + ++E + I AAG HSA + G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434
Query: 263 GDRAVDKMLFQEGNHARRPSLISKL--------------------PYSEEVV-------- 294
G ++ + + P ++ L YS+ V
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494
Query: 295 ------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
CG HT LT G ++ WGSN++G LG+G E V+ +P
Sbjct: 495 TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTP 554
Query: 343 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
+ +++CG KH A+++ G + W G + GQL G + PS
Sbjct: 555 IRRIACGSKHCLAVAQYGDVFAW------------GANDNGQLGLGVVRPS 593
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 68/343 (19%)
Query: 42 LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG+ D G+LGLG E ++ PV F ++ +ACG H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
GQLG+ + S EP ++ L ++ V + G +S+ IT V GE L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTAL-RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639
Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
WG +G+LGLG+ A V +P +V C+S F+
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G S+A+T G+ +WGAG GRLG G + + YTP +GV+++
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL------PYSEEVVCG 296
AAG HS + +G ++ +G R + N+ P + +L P + +
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRR---EDTCSTTNYM-SPRIFMQLEGQGGVPKVKSISAS 803
Query: 297 GYHTCVLTSGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 336
H+ +T GE++ WG N + GC G + L PERV G
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 127/300 (42%), Gaps = 40/300 (13%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
+P +K + ++CG HTL L++ G +YA G+ +G LG + S P+R+
Sbjct: 171 KPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDT-SDSYTPVRVYL 229
Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
SG KKE V + S G HS A T DG L+ WG NG+LGLG
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P I A G S + G + +WG+GG GRLGHG + I
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNA--GDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP-- 345
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--- 277
PR ++ GV V A G H+ + G V+ +G A + F EG
Sbjct: 346 -------VPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG--AGLALGFGEGEDGSG 396
Query: 278 --ARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P +S + + + G YH+ +T GG+L WG + LG G P+ V
Sbjct: 397 GMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 146/320 (45%), Gaps = 50/320 (15%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
+L++L CG +HT+ LT G V+ G ND GQLG+ E++ EP+++ + +I+
Sbjct: 501 TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIAC 560
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
G H A+ G+++ WG N NGQLGLG + A V + V+ G +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITS 620
Query: 184 LGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
LG QSV+ G G + +WGA SG+LG G++ + S S TP+ K + V V
Sbjct: 621 LGGAQSVSGETGTEFGDLWAWGAAESGKLGLGED------VASGSILTPQ--KVVFSVPV 672
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
AC ++D + Q +R +S P + G H+
Sbjct: 673 ---------CAC-------------SLDSLEMQA---YKRVFCVSFSP----LCSGTSHS 703
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+T+ GE Y WG+ G LGIG+ ++P R P + V+ G H+ A+S
Sbjct: 704 LAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFP-KGVRLRSVAAGACHSLALSMDG 762
Query: 361 ILTWGWGGSHGTFSEDGHSS 380
L W WG T S + S
Sbjct: 763 DL-WFWGRREDTCSTTNYMS 781
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 159/379 (41%), Gaps = 64/379 (16%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-----GCVYATG 96
WG LG+G + R P + F K ++CG ++ L + G VY G
Sbjct: 73 WGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFG 132
Query: 97 LNDFGQLGISENIG---------------------YSLEPLRISGLKK-EVVQISTGYHH 134
L + G+LG +N ++ +P R+ K ++ +IS G H
Sbjct: 133 LGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADH 192
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-------- 186
+ A++ +G LY WG S G LG G + P+ + +G K+ +G
Sbjct: 193 TLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPV 252
Query: 187 ---------EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ S+A T G + +WG GG+GRLG G L +P ++ +
Sbjct: 253 IVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSL---------SPAVVDYILD 303
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVV 294
+ AG HSACID G +Y +G ++ + P + +P + V
Sbjct: 304 RDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQ-VA 362
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLG---IGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG +HT LT G ++ WG+ G GS ++ P+ + E+ V ++ G
Sbjct: 363 CGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSD--IEAAVLNIAAGPY 420
Query: 352 HTAAISEG-KILTWGWGGS 369
H+AA++ G +L WG GGS
Sbjct: 421 HSAAVTVGGDLLVWGVGGS 439
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 71/351 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN---D 99
WG+G +GRLG G P F + +ACG HTL LT G V+A G
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ G + G P +S ++ V+ I+ G +HS+A+TV G+L +WG + +LG G
Sbjct: 388 FGE-GEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGD 446
Query: 160 KAAKVIPIPTKVECLSG---IFTKQAALGFEQ---------------------------- 188
+ + P P V L + Q+ LG +
Sbjct: 447 QQNQ--PFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQS 504
Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
++A+TG G V WG+ G+LG G++ +Y P + E ++
Sbjct: 505 LECGESHTIALTGAGAVWVWGSNDDGQLGLGEDV-------EEDQYEPVKL-ECFSTPIR 556
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
A G H + + G V+ +G ++ + P+ ++ L + +V CG Y
Sbjct: 557 RIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSA 616
Query: 301 CVLTSG-------------GELYTWGSNENGCLGIGSIDV----LHSPERV 334
C+ + G G+L+ WG+ E+G LG+G DV + +P++V
Sbjct: 617 CITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGE-DVASGSILTPQKV 666
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 143/327 (43%), Gaps = 66/327 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF---------EKHSLKALACGGAHTL---FLTETG 90
WG D G+LGLG + + P +A + +S + GGA ++ TE G
Sbjct: 577 WGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFG 636
Query: 91 CVYATGLNDFGQLGISENIGY------------------SLEPLRISGLKK----EVVQI 128
++A G + G+LG+ E++ SL+ L + K+ +
Sbjct: 637 DLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPL 696
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+G HS AIT GE Y WG G+LG+G A PT+ + G+ + A G
Sbjct: 697 CSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAY--TPTRCDFPKGVRLRSVAAGACH 754
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY-TPRLIKELEG----VKVKIA 243
S+A++ G + WG +E + ST+ Y +PR+ +LEG KVK
Sbjct: 755 SLALSMDGDLWFWGR---------REDTC-----STTNYMSPRIFMQLEGQGGVPKVKSI 800
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR------RPSLISKLPYS-EEVVCG 296
+A HS + E G V+ +G D L+Q G R RP ++ LP + + V G
Sbjct: 801 SASERHSLAVTEAGEVFAWG----DNKLYQTGCGKRQAERLDRPERVAGLPSACQWVATG 856
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + GE++ G ++G LG G
Sbjct: 857 PQGSFFILASGEVFAAGVIKSGRLGTG 883
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 150/359 (41%), Gaps = 44/359 (12%)
Query: 68 FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
F S+K +A G HTL + G ++ G N LG+ I + P + K
Sbjct: 43 FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102
Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
++S G ++S+ + G++Y +G + G+LG K A +
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162
Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P P++V + + G + ++A++ G + +WG G G LG G S
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY 222
Query: 219 GFLRST--SEYTPRLIKELEGVK--------VKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+R SE KE GV V +AG HS +G ++ +G
Sbjct: 223 TPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNG 282
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + P+++ + + V G H+ + G LYTWGS G LG G
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 384
+ P +V+G F PV QV+CG HT A++ +G + WG G + G F E SGG +
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG-FGEGEDGSGGMV 399
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 85 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 143
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 144 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 201
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 202 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 252
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 253 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 310
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 311 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 344
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 39 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 97
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 98 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 157
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 158 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 207
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 208 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 267
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 268 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 326
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 327 SAHTSAAKTQGGHVYMWG 344
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG +G ++ST E PR + L G K+ + G H
Sbjct: 71 TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 121
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 122 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 181
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 241
Query: 368 GS 369
G+
Sbjct: 242 GN 243
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 237 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 296
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 297 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 349
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 350 --SVILPHHTHFCCTDDVF 366
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + +
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGN---------Q 221
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 222 LTP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG +G ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
AL+ G H +T+TG VY G +GQLG +++ + P + +K EV +S G+
Sbjct: 275 FSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVD-KIIPQPVPRIKGEVKSVSAGF 333
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ A+T G L+ WG G+LG A ++IP G+ A G ++ +
Sbjct: 334 YHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVL 393
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+V S+G+G SGRLGHG ++ +++P + LE + AAGF HS
Sbjct: 394 NRRGQVFSFGSGDSGRLGHGNDN---------DQWSPTFLSALESERCVSIAAGFAHSVA 444
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGE 308
+ + G++Y +G + ++ + P ++ + + V G HTC+ S G
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGS 504
Query: 309 LYTWGSNENGCLGIGS-----IDVLHS 330
L T G +G + GS +D LH+
Sbjct: 505 LITLGRVSHGRMAEGSCAQDMLDTLHT 531
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
AVT G V +WG G G+LGHG + + P+ + ++G +VK +AGF H+
Sbjct: 287 AVTDTGLVYTWGQGRYGQLGHGDD---------VDKIIPQPVPRIKG-EVKSVSAGFYHT 336
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYSEEVVCGGYHTCVLTS 305
+ +G ++ +GD K+ + P+L++ +P + GG HT VL
Sbjct: 337 VAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAA-AQAGGSHTLVLNR 395
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
G+++++GS ++G LG G+ + SP + SE V ++ G+ H+ A+++ G+I TW
Sbjct: 396 RGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVS-IAAGFAHSVALTDQGQIYTW 454
Query: 365 GWG 367
G G
Sbjct: 455 GCG 457
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G + P K +K+++ G HT+ +T G ++ G G+
Sbjct: 297 WGQGRYGQLGHGDDVDKIIPQPVPRI-KGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGK 355
Query: 103 LGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++N L P ++ + V G H+ + G+++ +G +G+LG G
Sbjct: 356 LGHNDN-AQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGN 414
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PT + L A GF SVA+T G++ +WG G GRLGHG +S
Sbjct: 415 DNDQW--SPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDS---- 468
Query: 220 FLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFG 263
E PR + + + +K AAG H+ G + G
Sbjct: 469 -----DEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLG 509
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+GD GRLG G+ +W P SA E ++A G AH++ LT+ G +Y G G+
Sbjct: 402 FGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGR 461
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L P +++ + + ++ ++ G H+ +G L G+ S+G++ G
Sbjct: 462 LGHGSDSDEVL-PRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGS 520
Query: 160 KAAKVI 165
A ++
Sbjct: 521 CAQDML 526
>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 383
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 137/282 (48%), Gaps = 40/282 (14%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 35 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 87
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH T E PR + + K+
Sbjct: 88 IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRRVDDSWDCKIS 138
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------QEGNHARRPSLISKLPYS-EEV 293
A H+A I E+G +Y++G D L EG PS + L V
Sbjct: 139 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 198
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKH 352
CGG+ T LT G+L+ WG+N N LG G D L E + P E + Q++CG H
Sbjct: 199 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEGVRITQIACGGYH 256
Query: 353 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
+ A++E GK+L+WG GG HG G R Q P+E
Sbjct: 257 SLALTEEGKVLSWGHGG-HGQL-------GSSSLRNQKVPTE 290
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 145/310 (46%), Gaps = 27/310 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 54 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ + P + LEGV++ A G HS + E G+V +G ++
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCV-------LTSGGELYTWGSNENGCLGI-GSI 325
+ + P+ I L + V GG + LT GGEL+ WG+ ++ LG+ G
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGVPGLP 342
Query: 326 DVLHSPERVQ 335
++ +P V
Sbjct: 343 EIQTTPVEVN 352
>gi|74190775|dbj|BAE28179.1| unnamed protein product [Mus musculus]
Length = 370
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 157/355 (44%), Gaps = 47/355 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE A AG HSA + + G +Y++G R L
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247
Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
P I + +E V G H T G+++TWG + G LG L
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303
Query: 331 PE-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGW 366
PE QGP + P ++SCG +H A+ K +WGW
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW 358
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
+ + L N A+ PS ++ L S V V G H+ LT GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 319 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
L ++ L P+R++ F + V V GW H A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 131/301 (43%), Gaps = 36/301 (11%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E R +C ++ +ACG T+ LTE G V + G N FGQLG+
Sbjct: 79 GQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG---KNSNGQLGLGKKAAKVI 165
+ P I L+++VV ++ G H+ A T G ++ WG +S +L G+ +
Sbjct: 139 PRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFL 198
Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P++V L A G + S ++T G++ W GR HGQ +S FL
Sbjct: 199 TAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVW-----GRNKHGQLASRAVFLP- 252
Query: 224 TSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG----------------DR 265
P+ I+ + KV +G+ H E G+V+ +G +
Sbjct: 253 ----LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308
Query: 266 AV--DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V D L +G PS + L + E+ CG H + + +WG NE+G G G
Sbjct: 309 PVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIR-DKCCSWGWNEHGMCGDG 367
Query: 324 S 324
+
Sbjct: 368 T 368
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 101/243 (41%), Gaps = 25/243 (10%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
E G+V G A ++ G P I L E+VVC G H T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175
Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
WG S C G + P RV G + + V V+ G H+A++++ G++
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELY 234
Query: 363 TWG 365
WG
Sbjct: 235 VWG 237
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P + E + G H+ LT+TG +Y G N GQL S + L P RI
Sbjct: 202 EPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPL-PQRIEA 259
Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GKKAAKVI--------- 165
++V + +G+ H A T G+++ WG+ GQLG +A K +
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQ 319
Query: 166 ----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+P+ + CL+G + + G E ++AV K SWG G G G ES
Sbjct: 320 GPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTES 370
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
+A G H+ + E VY FG + LF+ P +I ++ + +
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT ++T G +YT+G +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 143/307 (46%), Gaps = 32/307 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G N+ GQLGLG + G FT KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQLSAGANTS 190
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G++G +S++ P + G + + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEV--TVGKPISWISCGYYH 239
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + +G +Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGGGHTVVLTE 298
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
+Y +G + G LG+G+ S ++ + + +SCG HTA +++ G + T+
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTF 357
Query: 365 GWGGSHG 371
G G HG
Sbjct: 358 G-DGRHG 363
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 149/360 (41%), Gaps = 51/360 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + +++ +ACG HT +T +G +Y G +++
Sbjct: 314 WGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNY 373
Query: 101 GQLG--------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G LG I + +G +E +R+S IS G H++ +T G+L+ +G S
Sbjct: 374 GLLGHGSEVSHWIPQKVGGQMEGIRVS-------YISCGAWHTAVVTSAGQLFTFGDGSF 426
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGK 197
G LG G P +VE L G+ T + A G + A K
Sbjct: 427 GALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRK 484
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G GRLGHG L P + L ++ A G + + G
Sbjct: 485 LYTWGDGDKGRLGHGDNEPRL---------VPECVAALIEERICQVACGNDLTVALTTAG 535
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
RVY G A ++ N + P+ + + EEV CG YH VLTS E+YTWG
Sbjct: 536 RVYTMGSTAYGQLGSATAN-GKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 374
NG LG G + ++P V + V V+CG K T I I W H S
Sbjct: 595 GLNGQLGHGDNNHRNTPTIVD-VLKDKQVKNVACGSKFTVVIC---IHKWVSSADHSVCS 650
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 160/340 (47%), Gaps = 42/340 (12%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENI 109
SL S+ ++ A E + +ACGG H + +T G +++ G G+L G+ ++
Sbjct: 271 SLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPI 167
+ +SG E+V + G +H+ A+T+ G+LY WG ++ G LG G + + IP
Sbjct: 331 SHPKIIDTLSGTNVELV--ACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQ 388
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+ + GI + G + VT G++ ++G G G LGHG TS +
Sbjct: 389 KVGGQ-MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGD--------HITSNF 439
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE---------------NGRVYIFGDRAVDKMLF 272
PR ++ L G++ A G H+A E + ++Y +GD DK
Sbjct: 440 -PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG--DKGRL 496
Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
G++ R P ++ L +V CG T LT+ G +YT GS G LG + +
Sbjct: 497 GHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANG- 555
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
P V+G + S V++V+CG H A + S+ ++ TWG G
Sbjct: 556 KLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKG 595
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 37/291 (12%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ----ISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G ++ L+ L L+ VV I+ G H+ +T GE++ WG+ S G+L
Sbjct: 263 VNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRL 322
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQ 213
G G +A + P ++ LSG + A G + AVT G + +WG G G LGHG
Sbjct: 323 GHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGS 380
Query: 214 ESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
E S + P+ + ++EG++V + G H+A + G+++ FGD + +
Sbjct: 381 E---------VSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGH 431
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT---------------SGGELYTWGSN 315
+ + P + L + +V CG +HT S +LYTWG
Sbjct: 432 GDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG 491
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ G LG G + PE V E + QV+CG T A++ G++ T G
Sbjct: 492 DKGRLGHGDNEPRLVPECVAALIEER-ICQVACGNDLTVALTTAGRVYTMG 541
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+ ++ + V A G H+ + G ++ +G+ + ++ P +I L
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340
Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
+ E V CG YHTC +T G+LYTWG ++ G LG GS +V H P++V G V
Sbjct: 341 GTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGS-EVSHWIPQKVGGQMEGIRV 399
Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+SCG HTA + S G++ T+G G+F GH
Sbjct: 400 SYISCGAWHTAVVTSAGQLFTFG----DGSFGALGH 431
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 28/296 (9%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
L + E+G V+ FG+ +E+I P + + V IS G H++ +T +G+
Sbjct: 1 LCVLESGAVFT-----FGKSRFAEDI-----PSKFWFKNDKPVLISCGDEHTAIVTGNGK 50
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LYM+G N+ GQLGLG K + PT V+ L TK A G ++ T G V + G
Sbjct: 51 LYMFGSNNWGQLGLGSK--NTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGG 108
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G RST + K+K AAG SA + E+G+++++G
Sbjct: 109 NSEGQLGLGDTEE-----RSTFHLISFFTNQH---KIKQLAAGSYTSAAVTEDGQLFVWG 160
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
D + ++ + P + + CG YH+ ++T GELYT+G ENG LG+
Sbjct: 161 DNSEGQIGLADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLL 220
Query: 324 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTF 373
+ ++ P+ V G + V++V+CG +HT ++E + T+G G HGTF
Sbjct: 221 PEQLKNNRVPQPVPGIMEK--VNKVACGGEHTVVLTETDVYTFGLGQYGQLGHGTF 274
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 43/299 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 53 MFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 112
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL +
Sbjct: 113 QLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADE 172
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +P V G + G+ S +TG G++ ++G +G+LG E
Sbjct: 173 ACVSVPCQVDV----GKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQ----- 223
Query: 221 LRSTSEYTPRLIKELEGV--KVKIAAAGFLHSACIDENGRVYIFG--------------D 264
L++ R+ + + G+ KV A G H+ + E VY FG +
Sbjct: 224 LKNN-----RVPQPVPGIMEKVNKVACGGEHTVVLTETD-VYTFGLGQYGQLGHGTFIFE 277
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V K + H RR + + + CG HT V+ G ++T+G +G LG+G
Sbjct: 278 TSVPKSV----KHLRRHKICN-------ITCGENHTAVVAENGLMFTFGDGRHGKLGLG 325
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 28/327 (8%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F+ ++CG HT +T G +Y G N++GQLG+ S +P + LK E +
Sbjct: 27 FKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVS-KPTCVKALKPEKTK 85
Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
++ G +H+ T G +Y G NS GQLGLG + L FT KQ
Sbjct: 86 LAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEER------STFHLISFFTNQHKIKQ 139
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G S AVT G++ WG G++G E+ + P + G V
Sbjct: 140 LAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACV---------SVPCQVD--VGKPVS 188
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLIS-KLPYSEEVVCGGY 298
+ G+ HSA I +G +Y FG+ K +L ++ + R P + + +V CGG
Sbjct: 189 SISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGE 248
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
HT VLT ++YT+G + G LG G+ S + + ++CG HTA ++E
Sbjct: 249 HTVVLTE-TDVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAE 307
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLD 385
++ G HG + Q D
Sbjct: 308 NGLMFTFGDGRHGKLGLGEENYTNQFD 334
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 31/324 (9%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 18 SKFWFKNDIPAFLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSTVNKPTCVKALK 75
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+K ACG HTL TE G VYA+G N+ GQLG+ + + S + ++++ Q+
Sbjct: 76 PEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL 135
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DGEL+MWG NS GQ+GL K + +P +V G + G+
Sbjct: 136 SAGSNTSAALTEDGELFMWGDNSEGQIGL--KNITNVCVPQQVTV--GKPISWISCGYYH 191
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAG 246
S VT G++ ++G SG+LG ++ + R+ + + G+ K+ A G
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLV----------NHRMPQSVPGIPEKVVQVACG 241
Query: 247 FLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
H+ + E VY FG + LF+ P +I + + + CG H
Sbjct: 242 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE----TPVPKVIEHIKDLKISSIFCGENH 296
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T ++T G +YT+G +G LG+G
Sbjct: 297 TALITDLGLMYTFGDGRHGKLGLG 320
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 19/270 (7%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 7 FGKTKFAENI-----PSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGS 61
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 62 KS--TVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNS 119
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 120 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVC 171
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHS-PERVQGP 337
P ++ + CG YH+ +T+ GELYT+G E+G LG+ + V H P+ V G
Sbjct: 172 VPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG- 230
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWG 367
V QV+CG HT ++E + T+G G
Sbjct: 231 -IPEKVVQVACGGGHTVVLTEKAVYTFGLG 259
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 142/307 (46%), Gaps = 32/307 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ + +P + LK E V+ + G +H
Sbjct: 30 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVN-KPTCVKALKPEKVKFAACGRNH 88
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 89 TLVSTEGGKVYASGGNNEGQLGLGDTDER------NSFHLISFFTSQRKIKQLSAGSNTS 142
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G +++ P+ + G + + G+ H
Sbjct: 143 AALTEDGELFMWGDNSEGQIGLKNITNVC---------VPQQV--TVGKPISWISCGYYH 191
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
SA + G +Y FG+ K+ + NH R P + +P +V CGG HT VLT
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACGGGHTVVLTE 250
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
+YT+G + G LG+G+ +V + + + CG HTA I++ G + T+
Sbjct: 251 KA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTF 309
Query: 365 GWGGSHG 371
G G HG
Sbjct: 310 G-DGRHG 315
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 136/271 (50%), Gaps = 30/271 (11%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
SGL + V IS G HSS + VDG+L++WGK G+LG G++ +P T L I
Sbjct: 89 SGLTE--VGISCGLFHSS-LVVDGKLWIWGKGDGGRLGFGQEYPAFLP--TLNPNLDSI- 142
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ ALG SVA++ G+V +WG GG G LGH E PR+++
Sbjct: 143 -RSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHR---------ELLPRMVEGSWNA 192
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-------FQEGNHARRPSLISKLPYSE 291
K++ A H+A I E+G +Y +G D L EG PS + LP
Sbjct: 193 KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPV 252
Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
V CGG+ T VLT G+L+ WG+N N LG G P+ + + + Q++ G
Sbjct: 253 AAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPS-LQDVRIIQIASGG 311
Query: 351 KHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
H+ A+++ GK+L+WG+ G HG GHSS
Sbjct: 312 YHSLALTDDGKVLSWGY-GQHGQL---GHSS 338
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G + P + + S+++ A GG H++ L+ G V+ G FG
Sbjct: 113 IWGKGDGGRLGFGQEYPAFLPTLNPNLD--SIRSTALGGVHSVALSSLGQVFTWGYGGFG 170
Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS-NGQLGLGK 159
LG S L P + G ++ I+T H++AIT GELY WG++ +G+LGLG
Sbjct: 171 ALGHSV-YHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGP 229
Query: 160 KAAKV----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ IP+KV+ L + GF V +T G++ +WGA + LG G +
Sbjct: 230 NCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMV-LTQEGQLWNWGANSNYELGRGDK- 287
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ P+ I L+ V++ A+G HS + ++G+V +G ++
Sbjct: 288 --------VGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI 339
Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ + P++I L E V+ CGG + +T G+LY WG+ ++ LG+
Sbjct: 340 ENQKIPTVIEAL-ADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV 388
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 122/255 (47%), Gaps = 20/255 (7%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
S+L + F WG G +G LG P + ++ +A G HT +TE+G +
Sbjct: 156 SSLGQVFT--WGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGEL 213
Query: 93 YATGLND-FGQLGISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
Y G + G+LG+ N G + P ++ L V +S G + +T +G+L+
Sbjct: 214 YTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWN 273
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG NSN +LG G K P P + L + Q A G S+A+T GKVLSWG G
Sbjct: 274 WGANSNYELGRGDKVGGWKPQP--IPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQH 331
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH SSI ++ P +I+ L V A G SA I +NG++Y++G+ A
Sbjct: 332 GQLGH---SSI------ENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGN-A 381
Query: 267 VDKMLFQEGNHARRP 281
D L G +P
Sbjct: 382 KDSQLGVPGLPETQP 396
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG LG G W+P + + + +A GG H+L LT+ G V + G GQ
Sbjct: 274 WGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQ 333
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S +I P I L E V+ I+ G S+AIT +G+LYMWG + QLG+
Sbjct: 334 LGHS-SIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV-PGL 391
Query: 162 AKVIPIPTKVECL 174
+ P+P +V+ L
Sbjct: 392 PETQPLPVEVKFL 404
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP----------RL----IKELEGVKVKI 242
++LSWG G SG+LG G E L + + P RL ++ G+
Sbjct: 36 QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
+ G HS+ + +G+++I+G ++ F + A P+L L GG H+
Sbjct: 96 ISCGLFHSSLV-VDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIRSTALGGVHSVA 154
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
L+S G+++TWG G LG P V+G ++ + ++ HTAAI+E G++
Sbjct: 155 LSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAK-IRHIATAGTHTAAITESGEL 213
Query: 362 LTWG 365
TWG
Sbjct: 214 YTWG 217
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431
Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
P LI + + ++ CG YHT V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
G+++T+G G S + HSP +G P V Q+ CG HT A
Sbjct: 410 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 458
Query: 356 -ISEGKILTWGWGGS 369
+ G++++ G G S
Sbjct: 459 VYTTGQVVSLGRGPS 473
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++E +G+ +AA G S+ + +V S G G+LG S
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 220
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
P I+ L V + + + G HS + GRV+ +G + ++ E + P+ I+
Sbjct: 221 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 280
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
L + +V CG YH+ L+ G++++WGSN G LG+G ++ SP++V+ P+
Sbjct: 281 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 339
Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQL 384
QV+ G H+ A+S ++GWG + G + G+S+ Q+
Sbjct: 340 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI 380
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPSE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 24/285 (8%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ +ENI P + + +S G H++ +T + +L
Sbjct: 7 LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA I PT ++ L K AA G ++ T G V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G F + +TP +K +AG SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ ++ ++ ++ P ++ + CG YH+ +T GELYT+G ENG LG+ S
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPS 226
Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+++ SP+RV G E V QV+CG HT ++E + +G G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 30/306 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ ++P I LK E V+++ G +H
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + I T + + KQ + G S
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G++G +S++ P + G + + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y FG+ K+ L E NH R P + +P +V CGG HT VLT
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPSELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+Y +G + G LG+G+ S ++ + + +SCG HTA ++E G + T+G
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 320
Query: 366 WGGSHG 371
G HG
Sbjct: 321 -DGRHG 325
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 115 bits (287), Expect = 5e-23, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 142/313 (45%), Gaps = 31/313 (9%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL---KKE 124
F K L CG HT L G +Y G G LG + P IS L K E
Sbjct: 820 FNKKINSVLNCGYGHTA-LIRNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLE 878
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V+ ++ G +H++A+T +G +Y WG + GQLGLG P P + L+ +
Sbjct: 879 VLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYES--PYPRLITSLANENVITLSC 935
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A+T G+V +WG G G+LG G + P + L+ +K A
Sbjct: 936 GQFHTLALTEKGQVFAWGWGVHGQLGLGN---------IDDQRLPVCVNHLKDQVIKDIA 986
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP---------YSEEVVC 295
AG HS + + G+++ FG ++ + P LI + Y + C
Sbjct: 987 AGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISC 1046
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSCGWKHTA 354
G +H+ +LT G +YTWG + +G LG G + +P ++ + F D +SCG + TA
Sbjct: 1047 GCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTFK---ADCISCGCEFTA 1103
Query: 355 AISE--GKILTWG 365
A + GKI WG
Sbjct: 1104 AQEKQTGKIFCWG 1116
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 38/295 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLND 99
WG G LG G SR P S L+ L ACG HT LT G VYA G +
Sbjct: 846 WGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSK 904
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+GQLG+ + + S P I+ L E V+ +S G H+ A+T G+++ WG +GQLGLG
Sbjct: 905 YGQLGLGD-VYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLG 963
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P+ V L K A G S+ ++ G++ S+G+G G+LG G
Sbjct: 964 NIDDQRLPVC--VNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGN----- 1016
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--------ACIDENGRVYIFGDRAVDKM 270
+T P LI+ + K+ + A G+ HS A + +G VY +G R++D
Sbjct: 1017 ----TTKSSVPVLIQGISE-KIILIATGYFHSISCGCHHSALLTVSGGVYTWG-RSLDGQ 1070
Query: 271 LFQEGN-HARRPSLISKLPYSEEVV-CGGYHTCVLTSG-----GELYTWGSNENG 318
L G+ P+ I++ + + + CG C T+ G+++ WGSN G
Sbjct: 1071 LGNGGHKEVTAPTQINENTFKADCISCG----CEFTAAQEKQTGKIFCWGSNSVG 1121
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 27 CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
C + ++ L WG YG+LGLG + P + ++ ++ L+CG HTL L
Sbjct: 884 CGKNHTTALTNNGVYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLAL 943
Query: 87 TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELY 145
TE G V+A G GQLG+ NI P+ ++ LK +V++ I+ G+ HS ++ G+++
Sbjct: 944 TEKGQVFAWGWGVHGQLGLG-NIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIF 1002
Query: 146 MWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+G GQLG G +P I K+ ++ + + G S +T G V +
Sbjct: 1003 SFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGVYT 1062
Query: 201 WGAGGSGRLGHGQESSI 217
WG G+LG+G +
Sbjct: 1063 WGRSLDGQLGNGGHKEV 1079
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/160 (36%), Positives = 81/160 (50%), Gaps = 22/160 (13%)
Query: 228 TPRLIKELEGVKVK--------IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP+ E G V+ + G+ H+A I NG +Y +G + V L Q +R
Sbjct: 805 TPQKTMESSGTLVELFNKKINSVLNCGYGHTALI-RNGTIYTWG-QTVKGCLGQGPTMSR 862
Query: 280 R--PSLISKLP-YSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP-E 332
PS IS L + EV+ CG HT LT+ G +Y WG ++ G LG+G DV SP
Sbjct: 863 HSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLG--DVYESPYP 919
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
R+ + V +SCG HT A++E G++ WGW G HG
Sbjct: 920 RLITSLANENVITLSCGQFHTLALTEKGQVFAWGW-GVHG 958
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 61/188 (32%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LGLG+++ + PV + + +K +A G H+L L++ G +++ G FGQ
Sbjct: 952 WGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQ 1011
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--------HHSSAITVDGELYMWGK----- 149
LG + N S P+ I G+ ++++ I+TGY HHS+ +TV G +Y WG+
Sbjct: 1012 LG-TGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQ 1070
Query: 150 -----------------------------------------------NSNGQLGLGKKAA 162
NS GQ+ + A
Sbjct: 1071 LGNGGHKEVTAPTQINENTFKADCISCGCEFTAAQEKQTGKIFCWGSNSVGQVRVTNLAI 1130
Query: 163 KVIPIPTK 170
V TK
Sbjct: 1131 PVKESATK 1138
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ ++ + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT-LNDIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 174/411 (42%), Gaps = 83/411 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
WG G YG LG G + PV S +K ++ + G H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHS 264
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
+ T G ++ G G+LG+ N G SL P + L +++V ++ G HS+ I G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG G+LG G + IP+P KVE G+ Q A G ++A+T G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG + G G++ S G + + P+ + ++E + I AAG HSA + G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434
Query: 263 GDRAVDKMLFQEGNHARRPSLISKL--------------------PYSEEVV-------- 294
G ++ + + P ++ L YS+ V
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494
Query: 295 ------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
CG HT LT G ++ WGSN++G LG+G E V+ +P
Sbjct: 495 TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTP 554
Query: 343 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
+ +++CG KH A+++ G + W G + GQL G + PS
Sbjct: 555 IRRIACGSKHCLAVAQYGDVFAW------------GANDNGQLGLGVVRPS 593
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 68/343 (19%)
Query: 42 LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG+ D G+LGLG E ++ PV F ++ +ACG H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
GQLG+ + S EP ++ L ++ V + G +S+ IT V GE L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTAL-RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639
Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
WG +G+LGLG+ A V +P +V C+S F+
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G S+A+T G+ +WGAG GRLG G + + YTP +GV+++
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL------PYSEEVVCG 296
AAG HS + +G ++ +G R + N+ P + +L P + +
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRR---EDTCSTTNYM-SPRIFMQLEGQGGVPKVKSISAS 803
Query: 297 GYHTCVLTSGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 336
H+ +T GE++ WG N + GC G + L PERV G
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 127/300 (42%), Gaps = 40/300 (13%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
+P +K + ++CG HTL L++ G +YA G+ +G LG + S P+R+
Sbjct: 171 KPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDT-SDSYTPVRVYL 229
Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
SG KKE V + S G HS A T DG L+ WG NG+LGLG
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P I A G S + G + +WG+GG GRLGHG + I
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNA--GDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP-- 345
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--- 277
PR ++ GV V A G H+ + G V+ +G A + F EG
Sbjct: 346 -------VPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG--AGLALGFGEGEDGSG 396
Query: 278 --ARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P +S + + + G YH+ +T GG+L WG + LG G P+ V
Sbjct: 397 GMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 146/320 (45%), Gaps = 50/320 (15%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
+L++L CG +HT+ LT G V+ G ND GQLG+ E++ EP+++ + +I+
Sbjct: 501 TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIAC 560
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
G H A+ G+++ WG N NGQLGLG + A V + V+ G +
Sbjct: 561 GSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITS 620
Query: 184 LGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
LG QSV+ G G + +WGA SG+LG G++ + S S TP+ K + V V
Sbjct: 621 LGGAQSVSGETGTEFGDLWAWGAAESGKLGLGED------VASGSILTPQ--KVVFSVPV 672
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
AC ++D + Q +R +S P + G H+
Sbjct: 673 ---------CAC-------------SLDSLEMQA---YKRVFCVSFSP----LCSGTSHS 703
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+T+ GE Y WG+ G LGIG+ ++P R P + V+ G H+ A+S
Sbjct: 704 LAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFP-KGVRLRSVAAGACHSLALSMDG 762
Query: 361 ILTWGWGGSHGTFSEDGHSS 380
L W WG T S + S
Sbjct: 763 DL-WFWGRREDTCSTTNYMS 781
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 159/379 (41%), Gaps = 64/379 (16%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-----GCVYATG 96
WG LG+G + R P + F K ++CG ++ L + G VY G
Sbjct: 73 WGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFG 132
Query: 97 LNDFGQLGISENIG---------------------YSLEPLRISGLKK-EVVQISTGYHH 134
L + G+LG +N ++ +P R+ K ++ +IS G H
Sbjct: 133 LGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADH 192
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-------- 186
+ A++ +G LY WG S G LG G + P+ + +G K+ +G
Sbjct: 193 TLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPV 252
Query: 187 ---------EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ S+A T G + +WG GG+GRLG G L +P ++ +
Sbjct: 253 VVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSL---------SPAVVDYILD 303
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVV 294
+ AG HSACID G +Y +G ++ + P + +P + V
Sbjct: 304 RDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQ-VA 362
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLG---IGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
CG +HT LT G ++ WG+ G GS ++ P+ + E+ V ++ G
Sbjct: 363 CGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSD--IEAAVLNIAAGPY 420
Query: 352 HTAAISEG-KILTWGWGGS 369
H+AA++ G +L WG GGS
Sbjct: 421 HSAAVTVGGDLLVWGVGGS 439
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 71/351 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN---D 99
WG+G +GRLG G P F + +ACG HTL LT G V+A G
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ G + G P +S ++ V+ I+ G +HS+A+TV G+L +WG + +LG G
Sbjct: 388 FGE-GEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGD 446
Query: 160 KAAKVIPIPTKVECLSG---IFTKQAALGFEQ---------------------------- 188
+ + P P V L + Q+ LG +
Sbjct: 447 QQNQ--PFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQS 504
Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
++A+TG G V WG+ G+LG G++ +Y P + E ++
Sbjct: 505 LECGESHTIALTGAGAVWVWGSNDDGQLGLGEDV-------EEDQYEPVKL-ECFSTPIR 556
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
A G H + + G V+ +G ++ + P+ ++ L + +V CG Y
Sbjct: 557 RIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSA 616
Query: 301 CVLTSG-------------GELYTWGSNENGCLGIGSIDV----LHSPERV 334
C+ + G G+L+ WG+ E+G LG+G DV + +P++V
Sbjct: 617 CITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGE-DVASGSILTPQKV 666
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 143/327 (43%), Gaps = 66/327 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF---------EKHSLKALACGGAHTL---FLTETG 90
WG D G+LGLG + + P +A + +S + GGA ++ TE G
Sbjct: 577 WGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFG 636
Query: 91 CVYATGLNDFGQLGISENIGY------------------SLEPLRISGLKK----EVVQI 128
++A G + G+LG+ E++ SL+ L + K+ +
Sbjct: 637 DLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPL 696
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+G HS AIT GE Y WG G+LG+G A PT+ + G+ + A G
Sbjct: 697 CSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAY--TPTRCDFPKGVRLRSVAAGACH 754
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY-TPRLIKELEG----VKVKIA 243
S+A++ G + WG +E + ST+ Y +PR+ +LEG KVK
Sbjct: 755 SLALSMDGDLWFWGR---------REDTC-----STTNYMSPRIFMQLEGQGGVPKVKSI 800
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR------RPSLISKLPYS-EEVVCG 296
+A HS + E G V+ +G D L+Q G R RP ++ LP + + V G
Sbjct: 801 SASERHSLAVTEAGEVFAWG----DNKLYQTGCGKRQAERLDRPERVAGLPSACQWVATG 856
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + GE++ G ++G LG G
Sbjct: 857 PQGSFFILASGEVFAAGVIKSGRLGTG 883
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 150/359 (41%), Gaps = 44/359 (12%)
Query: 68 FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
F S+K +A G HTL + G ++ G N LG+ I + P + K
Sbjct: 43 FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102
Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
++S G ++S+ + G++Y +G + G+LG K A +
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162
Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P P++V + + G + ++A++ G + +WG G G LG G S
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY 222
Query: 219 GFLRST--SEYTPRLIKELEGV--------KVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+R SE KE GV V +AG HS +G ++ +G
Sbjct: 223 TPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNG 282
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + P+++ + + V G H+ + G LYTWGS G LG G
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 384
+ P +V+G F PV QV+CG HT A++ +G + WG G + G F E SGG +
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG-FGEGEDGSGGMV 399
>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 157/323 (48%), Gaps = 28/323 (8%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
WR AF+ + LK G + T F+ +YA G N+FGQLGI +I YS +
Sbjct: 2 WR----RAFQ-NCLKIAFIGSSVTFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+ I ++V+ ++ S+AI G+LY WG++ G LG G+ + I +P+ V+CL
Sbjct: 57 VPI----QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINVPSLVQCLK 110
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
+ K A G A+T G++ +WG G+LGH ++S R EY L
Sbjct: 111 HLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAK 170
Query: 232 IKELE--GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKL 287
+ EL KV+ A G + + E+G VY G + +Q N P+ I L
Sbjct: 171 LPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKN-VDEPTFKQIPDL 229
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
++ G + L S G ++ WGSN G LG S V+ +P++++G + Q S
Sbjct: 230 KNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKG---LPKIKQFS 286
Query: 348 CGWKHTAAIS-EGKILTWGWGGS 369
CG + A+S +G + TWG+GG
Sbjct: 287 CGEQFIGALSTDGVLYTWGFGGD 309
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 168/366 (45%), Gaps = 47/366 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG+G+ S++ P + + +AC + + + ++G +Y G + FG
Sbjct: 35 WGWNNFGQLGIGNSISQYSPQLVPI---QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGL 91
Query: 103 LG--ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ENI P + LK + ++ G +H +AIT DG+LY WG +G+LG
Sbjct: 92 LGNGQVENINV---PSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSF 148
Query: 160 KAAKVIPIPTKVECLSGI-------------FTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+ +P K E + +Q ALG + ++ ++ G V S G
Sbjct: 149 DNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKK 208
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LG+ ++ E T + I +L+ + V+I + G S +D +G ++ +G
Sbjct: 209 GILGYQ--------TKNVDEPTFKQIPDLKNI-VQIDS-GTDFSVALDSDGNMFAWGSNY 258
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + + P I LP ++ CG L++ G LYTWG +G LG S
Sbjct: 259 FGQLGTPSPSVVQTPQQIKGLPKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQ 318
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDR 386
+ +P ++Q F ++ +D+VSCG H +S+ K+ G G GQL R
Sbjct: 319 DIPTPHKIQ--FDQN-IDKVSCGQAHVGIVSKNKLYMHGRGKE------------GQLGR 363
Query: 387 GQLTPS 392
G T S
Sbjct: 364 GSETES 369
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4274
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 4275 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4332
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4333 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWG 4371
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 144/319 (45%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3104 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3163 TTQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3216 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3272 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3331
Query: 337 PFSESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 3332 -LDAVFVNRVACGSSHSIA 3349
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4197
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4255
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4306
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4307 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4366
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4418
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3157 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3215
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3216 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3272 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3322
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3323 NKKPALVIGLDAVFVNRVACGSSHS 3347
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 149/303 (49%), Gaps = 25/303 (8%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYH 133
GG+ +LF+ ++ G VYA G G+LG ++ N+ + L LR +KK V + +G
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGK 3083
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSA 251
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 3142 SQGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE+
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
+TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3253 WTWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG-DN 3310
Query: 369 SHG 371
HG
Sbjct: 3311 DHG 3313
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4334
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4335 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4388 RPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 135/324 (41%), Gaps = 38/324 (11%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 561 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 606
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +P TK+
Sbjct: 607 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIA 663
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 664 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 714
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L + + V +A +G HS + G V+ +GD K+ N + +P L+ LP
Sbjct: 715 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 774
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVS 347
+ V G + L+S G+LYTWG + CLG ++ S R+ + V+
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVA 832
Query: 348 CGWKHTAAI-SEGKILTWGWGGSH 370
H A+ S G++ WG S
Sbjct: 833 VSVAHCLALSSSGEVFGWGRNDSQ 856
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 681
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +P T V LS ALG S+A+T
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 739
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L V+ A + F S +
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SVALS 788
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 848
Query: 311 TWGSNENGCLGIGSID---VLHSPERVQGP 337
WG N++ + S+ +L +P V P
Sbjct: 849 GWGRNDSQQICPASVSSEPLLRTPILVSLP 878
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 126/271 (46%), Gaps = 24/271 (8%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2969 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 3026
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLRQYVVKKVA 3077
Query: 245 --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
+G H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE 358
++S GELYTWG E G LG G P+ V + V QV+CG + T A++E
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTE 3196
Query: 359 -GKILTWGWG--GSHGTFSEDGHSSGGQLDR 386
G + +WG G G G +G + +++R
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 3227
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 118/302 (39%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4169 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4220 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 4280 DGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 4334
Query: 385 DR 386
R
Sbjct: 4335 RR 4336
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG G+LG + S I TP + L ++ A G +
Sbjct: 4047 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4097
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+++ G + ++ + P+L+ L + V GG H LT+ GE+
Sbjct: 4098 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4157
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
Y WG E+G LG G+ P+ V+ S D ++CG H+AAI+ G +LTWG G
Sbjct: 4158 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITASGHVLTWGKG 4215
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 153/329 (46%), Gaps = 46/329 (13%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQIS 129
+K++A G HTLFL++ G V++ G N G+LG + E Y++ P+ IS ++QIS
Sbjct: 49 VKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREG-SYTIYPVHISS-TVSIIQIS 106
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIP--IPTKVECLSGIFTKQAALGF 186
G HS A++ DG L+ WG NS+GQL + G A P +P+ E T Q A G
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE------TVQVACGA 160
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+V++ GGG+V WG GR+ H +P ++ + + +AG
Sbjct: 161 SHTVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVEIFISIPIVQISAG 204
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
L + + +G ++ +G ++ P + + V CG H+ LT
Sbjct: 205 NLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINSVVAVECGDSHSIALTHE 264
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
G +++ GS+ G LG G + + R S V +++CG HT ++ GK+ T+G
Sbjct: 265 GRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGL 324
Query: 367 GGSHGTFSEDGHSSGGQL----DRGQLTP 391
+S GQL R Q+TP
Sbjct: 325 ------------NSNGQLGHGNTRNQITP 341
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 143/312 (45%), Gaps = 30/312 (9%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
NG+ GR G+ PV S+ S+ ++ G +H++ +++ G ++A G N GQL
Sbjct: 76 NGELGRGGVREGSYTIYPVHISS--TVSIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLA 133
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
+S +I S P R+ L E VQ++ G H+ ++ G +++WG+ S+G++
Sbjct: 134 MSGDILASDTPKRVPSL-PETVQVACGASHTVSLNGGGRVFIWGQQSDGRIRHS------ 186
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P +VE I Q + G ++A+T G + +WG G+LG ++
Sbjct: 187 ---PAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVN----- 238
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL- 283
P + + V G HS + GRV+ G + ++ + N ++
Sbjct: 239 ----PCAVPNINSVVA--VECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRG 292
Query: 284 ISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
I+++ + + CG HT V+ + G+++T+G N NG LG G+ +P + S
Sbjct: 293 ITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITPRVID---SVE 348
Query: 342 PVDQVSCGWKHT 353
V V GW +
Sbjct: 349 NVASVFAGWDQS 360
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 143 ELYMWGKNSNGQLGLGKKA----AKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTG 194
+LY++G +GQLG + A+++ +P V +G+ K A G ++ ++
Sbjct: 5 QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64
Query: 195 GGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
GKV S G+ +G LG G +E S YT + V + +AG HS
Sbjct: 65 DGKVWSCGSNYNGELGRGGVREGS----------YTIYPVHISSTVSIIQISAGRSHSMA 114
Query: 253 IDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
+ ++GR++ +G + ++ + + P + LP + +V CG HT L GG ++
Sbjct: 115 VSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGRVFI 174
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
WG +G + HSP V+ F P+ Q+S G T A++ G + WG
Sbjct: 175 WGQQSDG-------RIRHSPAEVE-IFISIPIVQISAGNLFTMALTASGTLFAWG 221
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG + + P C+ +S+ A+ CG +H++ LT G V++ G + FGQ
Sbjct: 220 WGKNEEGQLGDFTNKDVVNP--CAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQ 277
Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG S+N + + L V +I+ G H + + +G+++ +G NSNGQLG
Sbjct: 278 LGCGQPNRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332
Query: 158 GKKAAKVIP-IPTKVECLSGIF 178
G ++ P + VE ++ +F
Sbjct: 333 GNTRNQITPRVIDSVENVASVF 354
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LHS C+++
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 39/340 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4050 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4107
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4108 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4166
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4167 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4220
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4221 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4270
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
R S KLPY E V CG + LT G +YTWG + LG GS+D
Sbjct: 4271 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4328
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V + ++ G H A S+ G++ TWG
Sbjct: 4329 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWG 4367
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 144/319 (45%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3101 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3159
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3160 VTQLKP--KLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3212
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3213 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3268
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3269 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3328
Query: 337 PFSESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 3329 -LDAVFVNRVACGSSHSIA 3346
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4136 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4193
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4194 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4251
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4252 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4302
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4303 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4362
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
+YTWG N+ G LG G++ + P R+ + +V+CG HT A+S ++
Sbjct: 4363 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4414
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 19/264 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N+ L ++ + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3154 LGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3214 EGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV--- 3268
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--A 278
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3269 ------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFVN 3320
Query: 279 RRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3321 KKPALVIGLDAVFVNRVACGSSHS 3344
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4156 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4216 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4273
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4274 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4330
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4331 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4383
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4384 RPRLVAALQGKHIVKVTCGSAHTLALST 4411
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 146/302 (48%), Gaps = 23/302 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3023 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3081
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3082 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 3139
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3140 QGELYTWGLGEYGRLGHGD---------NVTQLKPKLVVALAGRRVVQVACGSRDAQTLA 3190
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3191 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3250
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 3251 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG-DND 3308
Query: 370 HG 371
HG
Sbjct: 3309 HG 3310
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 148/357 (41%), Gaps = 46/357 (12%)
Query: 32 SSTLQRRFAAL-WGNGDYGRLGLG-------SLESRWRPVVCSAFEKHSLKALACGGAHT 83
S+T Q+R AL W + + G S ES P + F+ +K +AC
Sbjct: 525 STTPQQRIYALGWPSLSKDQQGFSAEPTLSWSGESTAVPTLSCRFQ---IKQVACCETQM 581
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH----HSSAIT 139
L L++ G +Y L EPL + + EV IS H H AI
Sbjct: 582 LILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHEVF-ISIAGHCEGRHFLAID 629
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ Y WG + +LG G A+ +P TK+ L + G S A+T GG +L
Sbjct: 630 SNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAALEQHCVQSVYCGCSYSAAITCGGNLL 687
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIA-AAGFLHSACIDENG 257
+WG G RLGHG S P L+ L + + V +A +G HS + G
Sbjct: 688 TWGRGTYARLGHGN---------SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 738
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
V+ +GD K+ N + +P L+ LP + V G + L+S G+LY+WG +
Sbjct: 739 LVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSLALSSEGQLYSWG--KA 796
Query: 318 GCLGIGSIDVLH---SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
CLG ++ S R+ + V+ H A+ S G++ WG S
Sbjct: 797 TCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQ 853
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 689 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 748
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 749 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVER 806
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 807 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 862
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 678
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +P T V LS ALG S+A+T
Sbjct: 679 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 736
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L V+ A + F S +
Sbjct: 737 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SLALS 785
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 786 SEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 845
Query: 311 TWGSNENGCLGIGSID---VLHSPERVQGP 337
WG N++ + S+ +L +P V P
Sbjct: 846 GWGRNDSQQICPASVSSEPLLRTPILVSLP 875
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 21/252 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT + +S + A G + V+ GKV + G
Sbjct: 2985 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 3042
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 3043 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3093
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P L+ L + +V CG H+ ++S GELYTWG E G
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWG--GSHGTFS 374
LG G P+ V + V QV+CG + T A++E G + +WG G G G
Sbjct: 3154 LGHGDNVTQLKPKLVVA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3212
Query: 375 EDGHSSGGQLDR 386
+G + +++R
Sbjct: 3213 SEGSDTPHEIER 3224
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 118/302 (39%), Gaps = 75/302 (24%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4047 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4104
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4105 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4164
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4165 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4216 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4275
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
D P +++ + V +V CG + + A+++ G + TWG G F GH S +
Sbjct: 4276 DGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWG----KGDFHRLGHGSVDHV 4330
Query: 385 DR 386
R
Sbjct: 4331 RR 4332
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG G+LG + S I TP + L ++ A G +
Sbjct: 4043 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4093
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G+++ G + ++ + P+L+ L + V GG H LT+ GE+
Sbjct: 4094 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4153
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
Y WG E+G LG G+ P+ V+ S D ++CG H+AAI+ G +LTWG G
Sbjct: 4154 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITASGHVLTWGKG 4211
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 293
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 294 SAHTSAAKTQGGHVYMWG 311
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG +G ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 89 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHHTHFCCTDDVF 333
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2732 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2791
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 2792 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2850
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 2851 GH--------FSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2961
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 2962 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3017
Query: 386 RGQLT 390
+ Q+
Sbjct: 3018 KPQMV 3022
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 130/266 (48%), Gaps = 23/266 (8%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + + LA G H L L+ G V++ G D G+LG + Y EP I+
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPTMIA 505
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV I+ G +S+AITVDGELY WG+ + G+LG G + P+ V L
Sbjct: 506 AFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 563
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 564 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 614
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
++L+ + + G S + ++G+VY +G ++ H R P L+ L +
Sbjct: 615 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 674
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNE 316
+V G H LT GE+++WGSN+
Sbjct: 675 VDVAVGSTHCLALTDDGEVHSWGSND 700
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 2788 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 2846
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 2847 DGKLGHFSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 2905
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2906 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2960
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 2961 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3014
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3015 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3074
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILT 363
QG + +V+CG H+ A + + T
Sbjct: 3075 QG-LEGQKITRVACGSSHSVAWTTVDVTT 3102
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 147/321 (45%), Gaps = 49/321 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 3927
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 3928 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 3985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3986 -GSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4042
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+GR+ +F Q G
Sbjct: 4043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVF----------QWG--LP 4083
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
R SL GE+YTWG N+ G LG G+ + + P R+
Sbjct: 4084 RWSL---------------------GLGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQ 4121
Query: 340 ESPVDQVSCGWKHTAAISEGK 360
+++V+CG HT + S K
Sbjct: 4122 GKKINRVACGSAHTLSWSTSK 4142
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 2842 WGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 2959
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2960 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3016
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3017 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3066
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3067 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3097
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 24/321 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 3797 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 3854
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 3855 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 3912
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 3913 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 3963
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 3964 CLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAV 4023
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
YTWG + LG GS D + P +VQG V ++ G H +E G+I + WG
Sbjct: 4024 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGRIKVFQWGL 4082
Query: 369 SHGTFSEDGHSSGGQLDRGQL 389
+ + G D GQL
Sbjct: 4083 PRWSLGLGEVYTWGDNDEGQL 4103
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2770 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 2829
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2830 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKAKRIRDIACGSSHSAAITS 2887
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 2888 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 2938
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2939 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2998
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2999 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3056
Query: 370 HG 371
HG
Sbjct: 3057 HG 3058
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 41/319 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + + + C L L+ +G VY +L P+ I L
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 453
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G + PT + +G
Sbjct: 454 SSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPTMIAAFNG-- 509
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + TP L
Sbjct: 510 -KQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGS---------SEDQTTPML 559
Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L+G+KV A +G + + ENG+V+ +GD K+ + + P L+ KL
Sbjct: 560 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 619
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+ +V CG + LT G++YTWG +N LG G+ + + P+ + + VD V+
Sbjct: 620 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD-VA 678
Query: 348 CGWKHTAAIS-EGKILTWG 365
G H A++ +G++ +WG
Sbjct: 679 VGSTHCLALTDDGEVHSWG 697
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + +AF KH + +ACG ++ +T G +Y G
Sbjct: 482 WGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAAITVDGELYTWGR 540
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 541 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 600
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 601 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 658
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L+ L+G KV A G H + ++G V+ +G
Sbjct: 659 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWG 697
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2724 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2781
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GK+ + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2833
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+
Sbjct: 2834 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYS 2893
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 2894 WGLGEYGRLGHGDNTTQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 2951
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ +A + + +ACG A TL +TE G V++ G D+
Sbjct: 538 WGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 597
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 598 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+V SWG+ + +L H
Sbjct: 658 --EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGS--NDKLQH 704
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 3757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3815
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 3816 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3875
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 3876 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 3926
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 3927 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 3986
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D +P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3987 SDGCKTPMKIDS-LTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4041
Query: 384 LDR 386
+ R
Sbjct: 4042 VRR 4044
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 592 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 651
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ + P + L+ K+VV ++ G H A+T DGE++ WG N Q L
Sbjct: 652 LGHGTDEHVRF---PKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTL 708
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 709 FSNKKQPKALP 719
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 141/311 (45%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 2242 ESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 2300
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + L+ EVV I+ G HS+ ITV G+LY WGK G+LG G ++ P VE
Sbjct: 2301 PRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKP--KLVEA 2358
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 2359 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 2409
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 2410 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 2469
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 2470 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 2528
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 2529 SAHTLAWSTSK 2539
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 21/304 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 1151 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 1210
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V P+P ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 1211 NGRLGLGISSGTV-PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 1269
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 1270 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 1320
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 1321 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1380
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGH--SSGG 382
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G G D H SG
Sbjct: 1381 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWGRGDFGELRPDSHIVQSGN 1438
Query: 383 QLDR 386
DR
Sbjct: 1439 VSDR 1442
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y+ G +G+
Sbjct: 2282 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGR 2341
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 2342 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 2399
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2400 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 2456
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 2457 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 2509
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 2510 RPRLVAALQGKKINRVACGSAHT 2532
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 155/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 2176 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 2234
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2235 RLGIGGTESVSTPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2292
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P VE L GI A G S +T G + SWG G GRLGHG
Sbjct: 2293 GNRSP--CDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD---- 2346
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 2347 -----SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 2401
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 2402 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 2461
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V ++ G H +E G++ TWG
Sbjct: 2462 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 2493
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 209 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 267
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 268 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 325
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 326 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 436
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 437 SWGSNDQ 443
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + GL
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYN-------SDTLG----PQLVQGL 195
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+++ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 196 ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 251
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 252 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 299
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 359
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + VD
Sbjct: 360 QDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD- 418
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 419 VAAGSTHCLALTEDSEVHSWG 439
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 154/348 (44%), Gaps = 49/348 (14%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 1207 GEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1266
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 1267 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 1325
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1326 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 1379
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLF 272
S P+ I+ L G V G S + ++G V+ FG+ D +
Sbjct: 1380 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIV 1434
Query: 273 QEGNHARRPSLISK------LPY---------SEEVVCGGYHTCVLTSGG---------- 307
Q GN + R + +K LP+ E+V ++ + + G
Sbjct: 1435 QSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQL 1494
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
E+Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 1495 EVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 1541
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1143 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1200
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPL--------PRQITALSNYVVKKVAVHSGGRHAMAL 1252
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 1253 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 1312
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 1313 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 1370
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 224 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 282
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 283 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 341
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 342 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 399
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 400 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 19/250 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 1189 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRH 1248
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1249 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1306
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 1307 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 1357
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 1358 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1417
Query: 311 TWGSNENGCL 320
TWG + G L
Sbjct: 1418 TWGRGDFGEL 1427
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 2171 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2229
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 2230 YGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2289
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G++V AAG HSACI G +Y +G
Sbjct: 2290 LGHGNRSPC---------DRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYG 2340
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 2341 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2400
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 2401 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 2455
Query: 384 LDR 386
+ R
Sbjct: 2456 VRR 2458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
L R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 1225 LPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDK 1279
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 1280 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 1338
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ +P +E L+G
Sbjct: 1339 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNVPQNIERLNGQG 1396
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
Q G + S+A+T G V +WG G G L
Sbjct: 1397 VCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 123/286 (43%), Gaps = 57/286 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + H + +ACG A TL LT+ G V++ G DF
Sbjct: 1313 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1372
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGK---------- 149
G+LG + G ++ P I L + V QI G S A+T G ++ WG+
Sbjct: 1373 GKLGRGGSEGCNV-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDS 1431
Query: 150 ------NSNGQLGLGKKAAKVIPIP--------------TKVECLSGI--FTKQAALGFE 187
N + ++ + K A +IP+P +E SGI F Q E
Sbjct: 1432 HIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRE 1491
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ + +V +WG G+ G+G +T P L++ LEG K+ A G
Sbjct: 1492 RQL------EVYAWGDNDHGQQGNGT---------TTVNRKPTLVQGLEGQKITRVACGS 1536
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
HS V + A + +LFQ AR P S L S +V
Sbjct: 1537 SHSVAWTT---VDVAAPSAHEPVLFQT---ARDPLGASYLGVSSDV 1576
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 2440 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 2499
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 2500 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 2534
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A G AC + NGRVY+ + + L Q G +R +++ +S+
Sbjct: 153 LANLGVTQIACAEKRFLILSRNGRVYVQAYNSDTLGPQLVQ-GLASR--NIVKVAAHSD- 208
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+++WG + G LG G L P+ + G + V ++CG
Sbjct: 209 ----GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 264
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 265 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 295
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 386 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 445
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ +P + GL K +V I+ G S A
Sbjct: 446 HFDTLRITKP-----QPSALPGLDTKHIVGIACGPAQSFA 480
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ ++ + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT-LNDIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 15/272 (5%)
Query: 46 GDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G GR G RW P A + ++CG H+L + G V+A G GQLG
Sbjct: 53 GQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 105 ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ E + P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 109 VGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 169 Q-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNVQ 221
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P L
Sbjct: 222 VQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQL 281
Query: 284 ISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
+ ++ ++ CGG HT + + G++ ++G
Sbjct: 282 VERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
A G H L L V++ G N GQLG + L EP++ + LK ++V S G H
Sbjct: 29 ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGVGE-LKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P I L + CG HT VL+ G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GRGPS 317
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 18/253 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQLG ++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TPR I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+ L+ G + WGSN G L + ++ V + G V +SCG +HTA +S
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLS 252
Query: 358 -EGKILTWGWGGS 369
+GK+ T+G S
Sbjct: 253 QDGKVFTFGDNSS 265
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I G A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V CG H+ + G ++ WG+ G LG+G + ++ R + + QVSCG H
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYH 139
Query: 353 TAAIS-EGKILTWGWGGSHG 371
+ A+S + ++ +WG SHG
Sbjct: 140 SLALSKDSQVFSWG-KNSHG 158
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 23/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV + +++ A+A G H++ LT G V+ G N GQ
Sbjct: 82 WGQNMHGQLGDGTNTDRKIPVQVK--DLNNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQ 139
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +P++++ LK + I++ H+ A+ DG ++ WG+N GQLG G
Sbjct: 140 LGDGTTKSRN-KPVQVNNLK-NITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTD 197
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ T+ L+ I + A G S+A G + +WG G+LG G
Sbjct: 198 RNTPVQTR--SLNTIIS--IAGGGYHSLAQKADGTIWTWGLNQYGQLGDGT--------- 244
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P L+ ++ V + G HS + NG ++I+G ++ + ++ P
Sbjct: 245 ITNRTIPVLVNGIK--DVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPV 302
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ L + GG H+ +L S G ++TWG+NENG LG G+ +P + + S
Sbjct: 303 PMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQAS---TLSN 359
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
V ++ G +H+ A+ S+G I WG
Sbjct: 360 VTAIASGEQHSIALKSDGTIWAWG 383
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +SR +PV + + ++ A+A G H L L G V+ G N +GQ
Sbjct: 132 WGSNWAGQLGDGTTKSRNKPVQVNNLK--NITAIASKGLHNLALKSDGTVWTWGRNIYGQ 189
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++ L ++ I+ G +HS A DG ++ WG N GQLG G
Sbjct: 190 LGDGTTTDRN-TPVQTRSLN-TIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITN 247
Query: 163 KVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP+ ++GI K ++ G + S+ + G + WG G+LG
Sbjct: 248 RTIPV-----LVNGI--KDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGD-------- 292
Query: 220 FLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
RST + TP + +L+ + G HS + +G V+ +G+ ++ +G
Sbjct: 293 --RSTDNRSTPVPMGDLKNIMT--IDGGGDHSLILKSDGTVWTWGNNENGQL--GDGTTM 346
Query: 279 RRPSLI--SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R + I S L + G H+ L S G ++ WGSN NG LG GSI +P V+
Sbjct: 347 SRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRSTPVLVK 405
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 138/296 (46%), Gaps = 23/296 (7%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ ++ G H++ L G V G N GQLG N + P+++ L V I+ G
Sbjct: 59 TILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKI-PVQVKDL-NNVTAIAGG 116
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+T DG ++ WG N GQLG G ++ P+ +V L I T A+ G ++A
Sbjct: 117 AWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPV--QVNNLKNI-TAIASKGLH-NLA 172
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G V +WG G+LG G +T TP + L + + IA G+ HS
Sbjct: 173 LKSDGTVWTWGRNIYGQLGDGT---------TTDRNTPVQTRSLNTI-ISIAGGGY-HSL 221
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
+G ++ +G ++ + P L++ + + CGG H+ VL + G ++
Sbjct: 222 AQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNGTIWI 281
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAI-SEGKILTWG 365
WG N++G LG S D +P P + + + G H+ + S+G + TWG
Sbjct: 282 WGFNQHGQLGDRSTDNRSTPV----PMGDLKNIMTIDGGGDHSLILKSDGTVWTWG 333
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 21/267 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
RI ++Q+S G HS A+ DG + WG+N +GQLG G + IP+ +V+ L+
Sbjct: 52 RIPIFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPV--QVKDLNN 109
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G SVA+T G V +WG+ +G+LG G + S P + L+
Sbjct: 110 V--TAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGT---------TKSRNKPVQVNNLK 158
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
+ IA+ G LH+ + +G V+ +G ++ P L + G
Sbjct: 159 NI-TAIASKG-LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGG 216
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
GYH+ + G ++TWG N+ G LG G+I P V G V + CG H+ +
Sbjct: 217 GYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGI---KDVSMIRCGGDHSIVL 273
Query: 357 -SEGKILTWGWG--GSHGTFSEDGHSS 380
+ G I WG+ G G S D S+
Sbjct: 274 KNNGTIWIWGFNQHGQLGDRSTDNRST 300
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG +G+LG S ++R PV + ++ + GG H+L L G V+ G N+ G
Sbjct: 281 IWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENG 338
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + + P++ S L V I++G HS A+ DG ++ WG N NGQLG G +
Sbjct: 339 QLGDGTTMSRA-TPIQASTLS-NVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSIS 396
Query: 162 AKVIPIPTKVE 172
+ P+ K++
Sbjct: 397 NRSTPVLVKIK 407
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 147/340 (43%), Gaps = 47/340 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A + + +ACG H +T +G +Y G +
Sbjct: 333 WGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSL 392
Query: 101 GQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P R++G +EV I+ G H++ +T G+L+ +G + G LG
Sbjct: 393 GLLGHGNDISHWI-PKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHN 451
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 452 DRQSAYSP--REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDK 509
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + L P + L + A G + + G V+ G
Sbjct: 510 GRLGHGDKEQRL---------VPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGS-- 558
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
M Q G+ P KLP Y E++ CG +H +T E+YTWG
Sbjct: 559 --SMFGQLGD----PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGA 612
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG G + ++P V+ E V ++CG TAA+
Sbjct: 613 NGRLGHGDQEDRNTPTLVEA-LKEKQVKSIACGATFTAAV 651
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 42/340 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ +ACGG H +T+ G V+ G G+LG + S P + L + ++
Sbjct: 310 DVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVS-HPQLVEALASSTTEVVAC 368
Query: 131 GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFE 187
G +H A+T+ G+LY WG +S G LG G + IP +V L + A G
Sbjct: 369 GEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHW--IPKRVNGPLEEVRVASIACGPW 426
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ VT G++ ++G G G LGH S Y+PR ++ L+G++ AA G
Sbjct: 427 HTAVVTTAGQLFTFGDGTFGVLGHNDRQSA---------YSPREVESLKGLRTVRAACGV 477
Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--E 291
H+A + E +G+++ +GD DK G+ +R P+ ++ L
Sbjct: 478 WHTAAVVEVMVGSSSASSCSSGKLFTWGDG--DKGRLGHGDKEQRLVPTCVAALVDHNFR 535
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+V CG T LT+ GE++T GS+ G LG D P V+G ++ V+ ++CG
Sbjct: 536 KVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADG-KLPGMVEGRLVDAYVEDIACGAH 594
Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
H A ++ + ++ TWG G++G GH G Q DR T
Sbjct: 595 HVACVTLKSEVYTWG-KGANGRL---GH--GDQEDRNTPT 628
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 41/264 (15%)
Query: 131 GYHHSSAITVDGELYMWGKNSNG--------QLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
G HH+ A+ G++YMWG+ ++G G P+P +E + +
Sbjct: 258 GSHHAEAL---GDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYV 314
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + + VT G+V +WG GRLGHG + + P+L++ L ++
Sbjct: 315 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDV---------SHPQLVEALASSTTEV 365
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE----EVVCG 296
A G H + +G +Y +GD L GN P ++ P E + CG
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACG 424
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+HT V+T+ G+L+T+G G LG +SP V+ V + +CG HTAA+
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTV-RAACGVWHTAAV 483
Query: 357 SE-------------GKILTWGWG 367
E GK+ TWG G
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDG 507
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 150/347 (43%), Gaps = 47/347 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A + + +ACG H +T +G +Y G +
Sbjct: 333 WGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSL 392
Query: 101 GQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P R++G +EV I+ G H++ +T G+L+ +G + G LG
Sbjct: 393 GLLGHGNDISHWI-PKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHN 451
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 452 DRQSAYSP--REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDK 509
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + L P + L + A G + + G V+ G
Sbjct: 510 GRLGHGDKEQRL---------VPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGS-- 558
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
M Q G+ P KLP Y E++ CG +H +T E+YTWG
Sbjct: 559 --SMFGQLGD----PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGA 612
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
NG LG G + ++P V+ E V ++CG TAA+ K L+
Sbjct: 613 NGRLGHGDQEDRNTPTLVEA-LKEKQVKSIACGATFTAAVCLHKWLS 658
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 159/339 (46%), Gaps = 40/339 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ +ACGG H +T+ G V+ G G+LG + S P + L + ++
Sbjct: 310 DVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVS-HPQLVEALASSTTEVVAC 368
Query: 131 GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G +H A+T+ G+LY WG +S G LG G + IP L + A G
Sbjct: 369 GEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGP-LEEVRVASIACGPWH 427
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGH S Y+PR ++ L+G++ AA G
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSA---------YSPREVESLKGLRTVRAACGVW 478
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EE 292
H+A + E +G+++ +GD DK G+ +R P+ ++ L +
Sbjct: 479 HTAAVVEVMVGSSSASSCSSGKLFTWGDG--DKGRLGHGDKEQRLVPTCVAALVDHNFRK 536
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V CG T LT+ GE++T GS+ G LG D P V+G ++ V+ ++CG H
Sbjct: 537 VACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADG-KLPGMVEGRLVDAYVEDIACGAHH 595
Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
A ++ + ++ TWG G++G GH G Q DR T
Sbjct: 596 VACVTLKSEVYTWG-KGANGRL---GH--GDQEDRNTPT 628
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 41/264 (15%)
Query: 131 GYHHSSAITVDGELYMWGKNSNG--------QLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
G HH+ A+ G++YMWG+ ++G G P+P +E + +
Sbjct: 258 GSHHAEAL---GDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYV 314
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + + VT G+V +WG GRLGHG + + P+L++ L ++
Sbjct: 315 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDV---------SHPQLVEALASSTTEV 365
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE----EVVCG 296
A G H + +G +Y +GD L GN P ++ P E + CG
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACG 424
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+HT V+T+ G+L+T+G G LG +SP V+ V + +CG HTAA+
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTV-RAACGVWHTAAV 483
Query: 357 SE-------------GKILTWGWG 367
E GK+ TWG G
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDG 507
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 15/272 (5%)
Query: 46 GDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G GR G RW P A + ++CG H+L + G V+A G GQLG
Sbjct: 53 GQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 105 ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ E + P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 109 VGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 169 Q-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNVQ 221
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P L
Sbjct: 222 VQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQL 281
Query: 284 ISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
+ ++ ++ CGG HT + + G++ ++G
Sbjct: 282 VERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
A G H L L V++ G N GQLG + L EP++ + LK ++V S G H
Sbjct: 29 ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGVGE-LKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P I L + CG HT VL+ G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GRGPS 317
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 18/253 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQLG ++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TPR I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
+ L+ G + WGSN G L + ++ V + G V +SCG +HTA +S
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLS 252
Query: 358 -EGKILTWGWGGS 369
+GK+ T+G S
Sbjct: 253 QDGKVFTFGDNSS 265
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I G A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V CG H+ + G ++ WG+ G LG+G + ++ R + + QVSCG H
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYH 139
Query: 353 TAAIS-EGKILTWGWGGSHG 371
+ A+S + ++ +WG SHG
Sbjct: 140 SLALSKDSQVFSWG-KNSHG 158
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 143/296 (48%), Gaps = 25/296 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
L+ G +H+L + G V+A G + G L + P+ + GL ++V ++ G HS
Sbjct: 37 LSAGDSHSLAVHADGSVWAWGASASG-LREEGALSRRFAPVPVPGLS-DIVSVAAGGAHS 94
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG L+ WG N GQLG G A+ +P+ +V LSG+ + A G S+A+
Sbjct: 95 LAVRADGTLWTWGGNPYGQLGDGTTTARALPV--QVAGLSGV--RAVATGLGHSLALRAD 150
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G S L TPR I L GV+ +AA GF HS + +
Sbjct: 151 GTVWAWGLNQFGQLGDGTTSQWL---------TPRPIPGLSGVR-SVAAGGF-HSLVVRD 199
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+ V+ +G D +G+ +RR P I L V G YH+ + + G L WG
Sbjct: 200 DDTVWAWGSN--DYGELGDGSTSRRAVPRAIPGLRNVASVAGGCYHSLAVHADGTLSAWG 257
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
N G LG G+ +P V G S V V+ + H+ A+ +EG + WG G
Sbjct: 258 LNSYGQLGDGTFSNRATPRPVPG---LSGVRCVATSFFHSLALRAEGTVWAWGLNG 310
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 26/296 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ +R PV + ++A+A G H+L L G V+A GLN FGQ
Sbjct: 106 WGGNPYGQLGDGTTTARALPVQVAGLS--GVRAVATGLGHSLALRADGTVWAWGLNQFGQ 163
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P I GL V ++ G HS + D ++ WG N G+LG G +
Sbjct: 164 LGDGTTSQW-LTPRPIPGLSG-VRSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSR 221
Query: 163 KVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P + G+ A G S+AV G + +WG G+LG G S
Sbjct: 222 RAVP-----RAIPGLRNVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFS------ 270
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ TPR + L G V+ A F HS + G V+ +G + +G +R+
Sbjct: 271 ---NRATPRPVPGLSG--VRCVATSFFHSLALRAEGTVWAWGLNGYGEQ--GDGTASRQS 323
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P + L V G +H+ + + G + WG N G LG G+ +P V
Sbjct: 324 PTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRSTPVTV 379
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 152/349 (43%), Gaps = 34/349 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+L R+ PV + ++A GGAH+L + G ++ G N +GQ
Sbjct: 56 WGASASGLREEGALSRRFAPVPVPGLSD--IVSVAAGGAHSLAVRADGTLWTWGGNPYGQ 113
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +L P++++GL V ++TG HS A+ DG ++ WG N GQLG G +
Sbjct: 114 LGDGTTTARAL-PVQVAGLSG-VRAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQ 171
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P + LSG+ + A G S+ V V +WG+ G LG G S
Sbjct: 172 WLTPRP--IPGLSGV--RSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTS------- 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
PR I L V A G HS + +G + +G + ++ ++ P
Sbjct: 221 --RRAVPRAIPGLR--NVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPR 276
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSES 341
+ L V +H+ L + G ++ WG N G G G+ +P V G S
Sbjct: 277 PVPGLSGVRCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASRQSPTPRPVPG---LS 333
Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
V V+ G H+ A++ ++GT S GH+ GQL G T
Sbjct: 334 GVLSVATGTFHSLAVN-----------TNGTVSAWGHNGQGQLGDGTAT 371
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 24/247 (9%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG +G+LG G+ S+W RP+ + ++++A GG H+L + + V+A G ND
Sbjct: 156 WGLNQFGQLGDGT-TSQWLTPRPIPGLS----GVRSVAAGGFHSLVVRDDDTVWAWGSND 210
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG ++ P I GL+ V ++ G +HS A+ DG L WG NS GQLG G
Sbjct: 211 YGELGDGSTSRRAV-PRAIPGLRN-VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGT 268
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P P V LSG+ + A F S+A+ G V +WG G G G G S
Sbjct: 269 FSNRATPRP--VPGLSGV--RCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASR--- 321
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TPR + L GV A G HS ++ NG V +G ++ H
Sbjct: 322 -----QSPTPRPVPGLSGVLS--VATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRS 374
Query: 280 RPSLISK 286
P + K
Sbjct: 375 TPVTVLK 381
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
S PL +G + V +S G HS A+ DG ++ WG +++G G + + P+P V
Sbjct: 22 SAPPLGRAG-EGPRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVP--V 78
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LS I + A G S+AV G + +WG G+LG G +T+ P
Sbjct: 79 PGLSDIVS--VAAGGAHSLAVRADGTLWTWGGNPYGQLGDGT---------TTARALPVQ 127
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+ L GV+ A G HS + +G V+ +G ++ + P I L
Sbjct: 128 VAGLSGVRA--VATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSGVR 185
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
V GG+H+ V+ ++ WGSN+ G LG GS P + G + V V+ G
Sbjct: 186 SVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSRRAVPRAIPGLRN---VASVAGGCY 242
Query: 352 HTAAI-SEGKILTWG 365
H+ A+ ++G + WG
Sbjct: 243 HSLAVHADGTLSAWG 257
>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
musculus]
gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
Length = 651
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL T+TG VYA G N+ G
Sbjct: 1 MFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEG 60
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + Q+S G + S+A+T DG+L+MWG NS GQ+GL K
Sbjct: 61 QLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDK 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP E G + G+ S VT G++ ++G +G+LG E +L
Sbjct: 121 SNVCIP----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE--LLMN 174
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
RS P+ + + +++A G H+ + E VY FG + LF+
Sbjct: 175 HRS-----PQRVLGIPERVIQVACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE-- 225
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +I ++ + + CG HT ++T G LYT+G +G LG+G
Sbjct: 226 --TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 273
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 30/286 (10%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHHSSAITVDGELYMWGKNSNGQ 154
G N++GQLG+ ++P I LK E V+++ G +H+ T G +Y G N+ GQ
Sbjct: 3 GSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 61
Query: 155 LGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LGLG + I T + + KQ + G S A+T GK+ WG G++G
Sbjct: 62 LGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSAALTEDGKLFMWGDNSEGQIG 116
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+S++ P + G + + G+ HSA + +G +Y FG+ K+
Sbjct: 117 LEDKSNVC---------IPHEVTV--GKPISWISCGYYHSAFVTMDGELYTFGEPENGKL 165
Query: 271 -LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
L E NH R P + +P +V CGG HT VLT +Y +G + G LG+G+
Sbjct: 166 GLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEKV-VYAFGLGQFGQLGLGTFL 223
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
S ++ + + +SCG HTA ++E G + T+G G HG
Sbjct: 224 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHG 268
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 24 LGICKRWI--------SSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLK 74
LGI +R I + L + +G G +G+LGLG+ L P + + +
Sbjct: 182 LGIPERVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKIC 241
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
++CG HT +TE G +Y G G+LG+ EN P S + VQ+
Sbjct: 242 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQL 296
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 262 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 307
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 142/321 (44%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L +P + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPVHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ ++ E E V V+IAA H SA + G VY++G
Sbjct: 276 PV--------HIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P+ I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTSFSCTDDVF 333
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGMNYSNCLGTGDSQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
Length = 1129
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 150/339 (44%), Gaps = 46/339 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + S+ +ACG HT +T G ++ G ++
Sbjct: 304 WGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNA 363
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + +V ++ G H++ +T +L+ +G + G LG G
Sbjct: 364 GLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHG 422
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K + P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 423 DKDN--VAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 480
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L + A G + + +G+V G
Sbjct: 481 RLGHGDKEPRL---------KPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGS--- 528
Query: 268 DKMLFQEGNHARRPSLISKLPY----------SEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ Q GN P KLP EE+ CG YH VLTS E+YTWG N
Sbjct: 529 -TVYGQLGN----PQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGAN 583
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G LG G I+ +P V+ + V ++CG +TAAI
Sbjct: 584 GRLGHGDIEDRKTPTLVET-LKDRHVKYIACGSNYTAAI 621
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V I+ G H++ +T GE++ WG+ S G+LG G + + P VE
Sbjct: 272 KPLE-SNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHG--VGRDVIQPRLVES 328
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G +G LGHG + S + P+
Sbjct: 329 LAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTD---------VSHWIPKR 379
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG++V G H+A + +++ FGD + + ++ P + L
Sbjct: 380 ISGPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGL 439
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ V CG +HT + S G+L+TWG + LG G + P V
Sbjct: 440 RTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA- 498
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
E +V+CG T + + G++ T G
Sbjct: 499 LIEYNFQKVACGHSLTVGLTTSGQVCTMG 527
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 47/260 (18%)
Query: 142 GELYMWG-------------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G++Y+WG KN+N L +A ++P P + + + A G
Sbjct: 237 GDVYIWGEVICDNLVKVGADKNANY---LTTRADLLLPKPLESNVVLDVH--HIACGVRH 291
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ +WG GRLGHG ++ PRL++ L V A G
Sbjct: 292 AALVTRQGEIFTWGEESGGRLGHGVGRDVI---------QPRLVESLAFTSVDFVACGEF 342
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCV 302
H+ + G ++ +GD + L G P IS P V CG +HT +
Sbjct: 343 HTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQVASVTCGPWHTAL 401
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---- 358
+T+ +L+T+G G LG G D + P V+ S V+CG HTAA+ E
Sbjct: 402 VTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVES-LSGLRTIAVACGVWHTAAVVEVIVT 460
Query: 359 --------GKILTWGWGGSH 370
GK+ TWG G +
Sbjct: 461 QSSASVSSGKLFTWGDGDKN 480
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 231 LIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L K LE + V A G H+A + G ++ +G+ + ++ G +P L+ L
Sbjct: 270 LPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESL 329
Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESP 342
++ + V CG +HTC +T GEL+TWG ++ G LG G+ DV H P+R+ GP
Sbjct: 330 AFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQ 388
Query: 343 VDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGH 378
V V+CG HTA ++ + + T+G GTF GH
Sbjct: 389 VASVTCGPWHTALVTTTRQLFTFG----DGTFGVLGH 421
>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1097
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + ++ +ACG HT +T +G +Y G +
Sbjct: 289 WGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNA 348
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+SG + +V I+ G HS+ T +G+L+ +G + G LG G
Sbjct: 349 GLLGQGTDVSHWI-PKRVSGPLEGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHG 407
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALG----------FEQSVAVTGGGKVLSWGAGGSGR 208
+ + + P +V+ LSG+ T + A G QS A K+ +WG G R
Sbjct: 408 DRES--LSFPKEVQLLSGLKTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNR 465
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G A
Sbjct: 466 LGHGSKDTYL---------LPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHG 516
Query: 269 KMLFQEGNHA---RRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN A + P+L+ + EEV CG +H VLTS ELYTWG NG LG
Sbjct: 517 QL----GNPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGH 572
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G + +P V+ + V +SCG T +I
Sbjct: 573 GDTEDRRTPTLVEA-LKDRHVKNISCGSNFTTSI 605
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 139/311 (44%), Gaps = 24/311 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +ACG H +T G V+ G G+LG +S L V ++ G
Sbjct: 267 VQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGE 326
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
+H+ A+T G+LY WG + LG+ IP +V L G+ A G S
Sbjct: 327 YHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSAL 386
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T GK+ ++G G G LGHG S L F P+ ++ L G+K A G H+A
Sbjct: 387 ATSNGKLFTFGDGAFGVLGHGDRES-LSF--------PKEVQLLSGLKTIKVACGVWHTA 437
Query: 252 CIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYH 299
I E + +++ +GD +++ + P+ +S L Y+ ++ CG
Sbjct: 438 AIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTL 497
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
T LT+ G ++T G +G LG + D P VQ V++VSCG H A + S
Sbjct: 498 TVALTTSGHVFTMGGTAHGQLGNPASDG-KMPTLVQDSLVGEFVEEVSCGAHHVAVLTSR 556
Query: 359 GKILTWGWGGS 369
++ TWG G +
Sbjct: 557 SELYTWGKGAN 567
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
+N + +PL S + +V QI+ G H + +T GE++ WG+ S G+LG G +
Sbjct: 250 KNDVLTPKPLE-SNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETD--FS 306
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRST 224
P VE L+ A G + AVT G + +WG G +G LG G +
Sbjct: 307 CPRLVEFLAVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTD---------V 357
Query: 225 SEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
S + P+ + LEG++V A G HSA NG+++ FGD A + + P
Sbjct: 358 SHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKE 417
Query: 284 ISKLP--YSEEVVCGGYHTCVL----------TSGGELYTWGSNENGCLGIGSIDVLHSP 331
+ L + +V CG +HT + S +L+TWG + LG GS D P
Sbjct: 418 VQLLSGLKTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLP 477
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
V + Q++CG T A+ + G + T G G +HG
Sbjct: 478 TCVSS-LIDYNFHQIACGQTLTVALTTSGHVFTMG-GTAHGQL 518
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPI------PTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ S+ G ++ +PI P +E + +Q A G VT
Sbjct: 225 GDVYLWGEVWSDAVFPDGSMSS--VPIKNDVLTPKPLESNVVLDVQQIACGVRHVALVTR 282
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG E+ PRL++ L V A G H+ +
Sbjct: 283 QGEVFTWGEESGGRLGHGFETDF---------SCPRLVEFLAVTNVDFVACGEYHTCAVT 333
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEV---VCGGYHTCVLTSGGEL 309
+G +Y +GD + L +G P +S +V CG +H+ + TS G+L
Sbjct: 334 TSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKL 393
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE----------- 358
+T+G G LG G + L P+ VQ S +V+CG HTAAI E
Sbjct: 394 FTFGDGAFGVLGHGDRESLSFPKEVQL-LSGLKTIKVACGVWHTAAIVEVMSQSGANVSS 452
Query: 359 GKILTWGWGGSH 370
K+ TWG G +
Sbjct: 453 RKLFTWGDGDKN 464
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG GS ++ P S+ ++ +ACG T+ LT +G V+ G GQ
Sbjct: 458 WGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQ 517
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + G ++ S + + V ++S G HH + +T ELY WGK +NG+LG G
Sbjct: 518 LGNPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTED 577
Query: 163 KVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
+ PT VE L K + G F S+ +
Sbjct: 578 RR--TPTLVEALKDRHVKNISCGSNFTTSICI 607
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ + ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+ + + G +Y +G + ++ GN
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269
Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
+ + + + E +V C HT S G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 134/297 (45%), Gaps = 25/297 (8%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+LT+ V+ G N G LG + LEP RI L K +V +S G H
Sbjct: 29 AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-LEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ +NG VY +G ++ + P I+ L E+VVCG HT LT G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
WG+N G LG G+ P +V E V+ +C HT+A G++ WG
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 88/206 (42%), Gaps = 28/206 (13%)
Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
Q L F Q V G G +V G SG LG G SIL PR
Sbjct: 15 QEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIL---------EPR 65
Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
I L G + V ++ H + +G VY +G A ++ N A P +LI
Sbjct: 66 RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+K S V CG +H+ VLT GE+Y WG N +G +G GS P +V V
Sbjct: 126 NKKAIS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183
Query: 345 QVSCGWKHT-AAISEGKILTWGWGGS 369
++CG + A + G++ WG+ G+
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGN 209
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|159039899|ref|YP_001539152.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918734|gb|ABW00162.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 554
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 155/352 (44%), Gaps = 28/352 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG LG GS PVV S ++ A+A GG H+L LT G V A G ND GQ
Sbjct: 61 WGQNDYGELGNGSTAGSNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGRNDHGQ 120
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +EP+ + V I+ G H+ A+T G + WG+N GQLG G
Sbjct: 121 LGDGSTVDK-VEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLGDGSTV 179
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K+ P+ V+ +G A G + ++A+T G V +WG+ SG LG G
Sbjct: 180 DKLEPV--SVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGELGDG--------- 228
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP L+ AG HS + V+ +GD + D L N +
Sbjct: 229 TTIDRTTPILVGLPG--TTVTTTAGGGHSFAVTSADTVHAWGDNS-DGQLGNGNNVDQLE 285
Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
++ +P V G H+ LT+ G L WG+N+ G LG G+ P V P
Sbjct: 286 PVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQLGNGNTLDQSEPVDVNLPT 345
Query: 339 SESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH-SSGGQLDRGQ 388
+ + H+ A++ G +L WG ++DG G LDR +
Sbjct: 346 GTTITAIATRDSDHSLALTAAGSVLAWG-------ENDDGELGDGSTLDRSE 390
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 16/265 (6%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGK 149
+ A G ND+G+LG G S P+ +S V ++ G HS A+T G + WG+
Sbjct: 57 TILAWGQNDYGELGNGSTAG-SNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGR 115
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLG G KV P+ V+ +G A G + ++A+T G VL+WG G+L
Sbjct: 116 NDHGQLGDGSTVDKVEPV--SVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQL 173
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + + P + G V A G H+ I G V+ +G + +
Sbjct: 174 GDGS---------TVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGE 224
Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVL 328
+ P L+ + GG H+ +TS ++ WG N +G LG G ++D L
Sbjct: 225 LGDGTTIDRTTPILVGLPGTTVTTTAGGGHSFAVTSADTVHAWGDNSDGQLGNGNNVDQL 284
Query: 329 HSPERVQGPFSESPVDQVSCGWKHT 353
P V P + V ++ G H+
Sbjct: 285 E-PVVVSMPLGAT-VTAIAGGNDHS 307
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PVV S ++ A+A G H+L LT G + A G ND GQ
Sbjct: 267 WGDNSDGQLGNGNNVDQLEPVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQ 326
Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S EP+ ++ + HS A+T G + WG+N +G+LG G
Sbjct: 327 LGNGNTLDQS-EPVDVNLPTGTTITAIATRDSDHSLALTAAGSVLAWGENDDGELGDGST 385
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ V +G A G S+A+
Sbjct: 386 LDRSEPV--DVNLPTGTTVTAIAAGDGHSLAL 415
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 76/201 (37%), Gaps = 19/201 (9%)
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ + + A E S + +L+WG G LG+G + TP
Sbjct: 31 MTVMQAVTVSPVAAQQEASPSTAASDTILAWGQNDYGELGNGSTA---------GSNTPV 81
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPY 289
++ V A G HS + G V +G D +G+ + +S P
Sbjct: 82 VVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGRN--DHGQLGDGSTVDKVEPVSVDFPA 139
Query: 290 SEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQ 345
V G H LTS G + WG N G LG GS +D L P V P + V
Sbjct: 140 GTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLGDGSTVDKLE-PVSVDFPAGTT-VTA 197
Query: 346 VSCGWKHTAAI-SEGKILTWG 365
++ G H AI S G + TWG
Sbjct: 198 IAGGDDHNLAITSTGGVFTWG 218
>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
castellanii str. Neff]
Length = 395
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 156/337 (46%), Gaps = 33/337 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVV-CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G G +G LG G ++ + A E H + A++ GG H+L LTE G V++ G G+
Sbjct: 9 GGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N EP RI+ V +IS G HS A+T DG+ Y +G G+LG G +
Sbjct: 69 LG-HGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDE 127
Query: 161 AAKVIPIPTKV--------------ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+++P + E + + A G+ S+ +T G+V S+GAG
Sbjct: 128 TDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LGHG L P +I+ L ++ A G ++ +D+ GRV+ FG
Sbjct: 188 GALGHGDRDKRL---------RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDY 238
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ F EG AR L S L +EE+ G H +LT G+L +G +NG LG+G
Sbjct: 239 SEFPKFTEGQ-ARFVLLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLG 297
Query: 324 SIDVLHSPERVQGPF--SESPVDQVSCGWKHTAAISE 358
+P V P + S ++CG KH A+ +
Sbjct: 298 DETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVD 334
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
+G G G LG G + R RP + A + ++ACG A+TL L + G V+ GL+ +F
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEF 241
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+ + L P + GL +E+ ++ G H +T +G+L +G NG+LGLG +
Sbjct: 242 PKF-TEGQARFVLLPSAL-GLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDE 299
Query: 161 AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTG----GGKVLSWGAGGSGRLGHGQ 213
++ PT V S T A G + +A+ G ++ ++G+G G+L +G
Sbjct: 300 TNRL--APTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGH 357
Query: 214 ESS 216
Sbjct: 358 RQD 360
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 140/346 (40%), Gaps = 46/346 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
+GNG +GRLG G+ E+ + P + F+ + + ++ G H+L LT+ G Y+ G FG
Sbjct: 61 FGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFG 120
Query: 102 QLGISENI-----------GYSLEPL---RISGLKKEVV--QISTGYHHSSAITVDGELY 145
+LG + G+ P R+ + + V ++ GY HS +T DG +Y
Sbjct: 121 RLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVY 180
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G G LG G + ++ PT +E L+ A G ++ + G+V +G
Sbjct: 181 SFGAGVMGALGHGDRDKRL--RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGL-- 236
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG 263
S F + + L+ G+ +I AG H + G++ FG
Sbjct: 237 -------DYSEFPKFTEGQARFV--LLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFG 287
Query: 264 DRAVDKMLFQEGNHARRPSLIS-----KLPYSEEVVCGGYHTCVLTS----GGELYTWGS 314
++ + + P+ ++ ++ CG H L G LY +GS
Sbjct: 288 LGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGS 347
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+ G L G H +R + + + + AAIS GK
Sbjct: 348 GDQGQLANG-----HRQDRASPTATTTSLPALLHQHIVPAAISAGK 388
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G VLS G G G LG G + L L TP I+ LE +V +AG HS + E
Sbjct: 3 GVVLSAGGGQHGSLGQGDAVTQLSVL------TP--IRALEAHRVVAVSAGGHHSLVLTE 54
Query: 256 NGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
GRV+ FG+ ++ GN RR + ++ G H+ LT G+ Y
Sbjct: 55 EGRVFSFGNGLHGRL--GHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAY 112
Query: 311 TWGSNENGCLGIGS-IDVL-----------HSP---ERVQGPFSESPVDQVSCGWKHTAA 355
++G G LG G D L SP +RV+ ++ ++ V+ G+ H+
Sbjct: 113 SFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLL 172
Query: 356 I-SEGKILTWGWG 367
+ ++G++ ++G G
Sbjct: 173 LTTDGRVYSFGAG 185
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V GG+H+ VLT G ++++G+ +G LG G+ + P R+ + + V ++S G H
Sbjct: 42 VSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTH 101
Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
+ A++ +GK ++G+ G F GH G + D QL P E
Sbjct: 102 SLALTKDGKAYSFGF----GMFGRLGH--GDETD--QLLPRE 135
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P IS L
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE-KDRIIEIAACH 293
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 294 LAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS ++ EV CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A ++ G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 125/301 (41%), Gaps = 19/301 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS S PV S A+A G H+L LT G + A G N FGQ
Sbjct: 111 WGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQ 170
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG S P+ +S V I+ G H+ +T G L WGKN+ GQLG G
Sbjct: 171 LGDGSTTDRS-TPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGTT 229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V G+ A G + S+ +T L+WG G+LG+G
Sbjct: 230 TGRDTPV--AVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGT------- 280
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P + G + AAG LHSA + G + +G ++ +
Sbjct: 281 --TTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSE 338
Query: 281 PSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P +S LP + H +TS G WG+N NG LG GS +P V
Sbjct: 339 PVAVS-LPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAVSL 397
Query: 337 P 337
P
Sbjct: 398 P 398
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 145/372 (38%), Gaps = 38/372 (10%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAAL---------WGNGDYGRLGLGSLESRWRP 62
+ L + L +G W Q R AA WG D G+LG G++ P
Sbjct: 23 FILALAVTLAQSIGASPGWA----QHRSAATAVVSDTILAWGENDGGQLGNGTMIDSSEP 78
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GL 121
V S ++ A+A G H L LT G V A G N GQLG S P+ +S
Sbjct: 79 VAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEGQLGNGSTTSSS-TPVAVSLPT 137
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
V ++ G HS A+T G + WG N+ GQLG G + P+ V +G
Sbjct: 138 GTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPV--AVSLPAGTTVAA 195
Query: 182 AALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G + ++ +T G +L+WG G+LG G +T TP + GV V
Sbjct: 196 IAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGT---------TTGRDTPVAVTLPPGVTV 246
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEE---VV 294
A G HS + + +G + Q GN SL+ LP E +
Sbjct: 247 TSVAGGRDHSLVLTSDDTALAWGGNS----FGQLGNGTTTDSLVPIAVALPTGTEATAIA 302
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G H+ LTS G + WG N G LG GS P V P H
Sbjct: 303 AGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNV 362
Query: 355 AI-SEGKILTWG 365
I S G L WG
Sbjct: 363 TITSAGAALAWG 374
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 131/318 (41%), Gaps = 32/318 (10%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAIT 139
A T +++T + A G ND GQLG I S EP+ +S V ++ G H A+T
Sbjct: 47 AATAVVSDT--ILAWGENDGGQLGNGTMIDSS-EPVAVSLPAGTAVAAVAVGDRHGLALT 103
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G + WG+N GQLG G + P+ V +G A G + S+A+T G +L
Sbjct: 104 SAGTVLAWGRNIEGQLGNGSTTSSSTPV--AVSLPTGTRAVAVAAGADHSLALTSAGTIL 161
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG G+LG G +T TP + G V AAG H+ + G
Sbjct: 162 AWGDNTFGQLGDGS---------TTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPT 212
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNE 316
+ + L R + LP V V GG H+ VLTS WG N
Sbjct: 213 LLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNS 272
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
G LG G+ P V P + + ++ G H+AA+ SEG WG
Sbjct: 273 FGQLGNGTTTDSLVPIAVALP-TGTEATAIAAGRLHSAALTSEGAAFAWG---------- 321
Query: 376 DGHSSGGQLDRGQLTPSE 393
H+ GQL G T S
Sbjct: 322 --HNGRGQLGNGSTTDSS 337
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 132/279 (47%), Gaps = 24/279 (8%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR-ISGLKKEVVQI 128
+ L A+ C L++TG V+ S + ++ L +SG+ V Q+
Sbjct: 79 EERLAAVGCTDDGVTLLSDTGVVFCVD---------SPHPPFTPRSLEALSGIT--VTQV 127
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G H+ ++ DG++Y WG+NS GQLGLGK+ I P V LS + Q + G +
Sbjct: 128 ACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDH 187
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S A++ G V WG G+LG G +T TP L+ L K AA G
Sbjct: 188 SFALSVSGSVFGWGRNDCGQLGLGD---------TTDRETPTLVHYLNMKKTVFAACGKD 238
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG 306
H+A + +G V+ FG ++ +A P L+++L ++ CG YHT VLT
Sbjct: 239 HTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDH 298
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
++Y++G NE+G LG P VQ P E P+ Q
Sbjct: 299 MKVYSFGCNEHGQLGPREETHPCVPLPVQLP-REGPIIQ 336
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG R P + ACG HT LT G V+ G +GQ
Sbjct: 200 WGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQ 259
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P ++ L +V +I+ G +H+ +T ++Y +G N +GQLG ++
Sbjct: 260 LG-HNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318
Query: 162 AKVIPIPTKV 171
+P+P ++
Sbjct: 319 HPCVPLPVQL 328
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+LGLG S P + + ++ GG H+ L+ +G V+ G ND
Sbjct: 146 WGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDC 205
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + L K+ V + G H++ +T+DG ++ +G GQLG
Sbjct: 206 GQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLG--HN 263
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + P V L G + A G ++ +T KV S+G G+LG +E+
Sbjct: 264 SFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG-NHARRPSLI 284
+TPR ++ L G+ V A G H+ + ++G+VY +G + ++ L +EG + P +
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170
Query: 285 ---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
S +P + V GG H+ L+ G ++ WG N+ G LG+G +P V +
Sbjct: 171 RSLSSMPVVQ-VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKK 229
Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
V +CG HTA ++ +G + T+G G + + GH+S
Sbjct: 230 TV-FAACGKDHTAVLTMDGTVFTFG----SGHYGQLGHNS 264
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LHS C+++
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 167/377 (44%), Gaps = 48/377 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G YG+LG G +E R P +C + + +++ +A GG HT +T G V+ G N G
Sbjct: 1 GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ S R L V ++ G+ + +T G + G N+ GQLG+G+K
Sbjct: 61 QLGLGHLADISAL-QRCPSLTHTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKP 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG----GSGRLGHGQESSI 217
+ VE L AA G ++AVT G+V WG G LG SS+
Sbjct: 120 NFTAEVQV-VESLKAAVVSVAA-GLRHALAVTDSGRVYQWGRGLLSQAKRTLG---PSSV 174
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L ST P + L+ ++ AG +H C+ E+G ++++G +++
Sbjct: 175 PPHLGST---VPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQLV------ 225
Query: 278 ARRPSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+R P L S +P ++ G H T G ++TWG G LG +
Sbjct: 226 SRDPFLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPA-PTS 284
Query: 329 HSPER---VQGPFSES--PVD--------QVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
SPE G E+ P + Q++CG +H AI G++L+WGW HG +
Sbjct: 285 RSPESRSTTDGANLEAGLPAEVKALQGATQIACGSEHNLAILAGRLLSWGW-NEHGMCGD 343
Query: 376 DGHSSGGQLDRGQLTPS 392
H+ + + QL P+
Sbjct: 344 GSHT---DVRQPQLVPA 357
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 145/333 (43%), Gaps = 34/333 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G+LGLG L C + H++ + CG TLFLT++G V + G N FGQL
Sbjct: 55 GQNHRGQLGLGHLADISALQRCPSL-THTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQL 113
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI + ++ E + LK VV ++ G H+ A+T G +Y WG+ Q +
Sbjct: 114 GIGQKPNFTAEVQVVESLKAAVVSVAAGLRHALAVTDSGRVYQWGRGLLSQAKRTLGPSS 173
Query: 164 VIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
V P +P+ V L ++ G V +T G + WG+ HGQ S
Sbjct: 174 VPPHLGSTVPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSN-----KHGQLVSRD 228
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DR 265
FL S L L G +V +G+ H E GRV+ +G R
Sbjct: 229 PFLSSAMPVKRSL---LGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPAPTSR 285
Query: 266 AVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + +G + A P+ + L + ++ CG H + + G L +WG NE+G G G
Sbjct: 286 SPESRSTTDGANLEAGLPAEVKALQGATQIACGSEHNLAILA-GRLLSWGWNEHGMCGDG 344
Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
S + P+ V + P+ + CG H+ A+
Sbjct: 345 SHTDVRQPQLVP---ALRPL-LIGCGAGHSMAV 373
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 152/335 (45%), Gaps = 31/335 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG GS E P + + ++ +ACG HT +T G +Y G ++
Sbjct: 101 WGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNI 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + +V +S G H++ +T G+L+ +G + G LG G
Sbjct: 161 GLLGNGTDVSHWI-PKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + P +VE LSG+ T A G + AV GK+ +WG G
Sbjct: 220 NRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G++ G+ V
Sbjct: 278 RLGHGDKEPRL---------KPTCVASLIDYDFCRIACGHSLTVGLTTSGQILSMGN-TV 327
Query: 268 DKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
L + + P L+ + + +V CG YH VLT+ E++TWG NG LG G I
Sbjct: 328 YGQLGNPRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDI 387
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
+ P V+ + V ++CG T+AI + K
Sbjct: 388 EDRKIPTLVEA-LRDRGVRHIACGSNFTSAICQHK 421
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 40/256 (15%)
Query: 142 GELYMWGK---NSNGQLGLGK------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ ++ ++G KA ++P P + + + ++ G + + V
Sbjct: 35 GDVYVWGEVICDNTVRVGPDTVIRSTGKADFLLPKPLESKLVLDVY--HVDCGVKHAALV 92
Query: 193 TGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G+V +WG GRLGHG +E S+ PRL++ L V I A G H+
Sbjct: 93 TKNGEVFTWGEESGGRLGHGSREDSV----------HPRLVESLAICNVDIVACGEFHTC 142
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSG 306
+ G +Y +GD + L G P IS +V CG +HT ++TS
Sbjct: 143 AVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTALVTSR 202
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
G+L+T+G G LG G+ + P V+ S V+CG HTAA+ E
Sbjct: 203 GQLFTFGDGTFGVLGHGNRESFSCPREVES-LSGLKTIAVACGVWHTAAVVEVIVTQSSS 261
Query: 359 ----GKILTWGWGGSH 370
GK+ TWG G H
Sbjct: 262 SMSSGKLFTWGDGDKH 277
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+RST + L K LE + V G H+A + +NG V+ +G+ + ++
Sbjct: 56 VIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSRE 115
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
+ P L+ L + V CG +HTC +T+ GELYTWG ++ G LG G+ DV H P
Sbjct: 116 DSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGT-DVSHWIP 174
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+R+ G V VSCG HTA + S G++ T+G GTF GH
Sbjct: 175 KRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFG----DGTFGVLGH 218
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +GE++ WG+ S G+LG G + V P VE
Sbjct: 69 KPLE-SKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LG+G + S + P+
Sbjct: 126 LAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTD---------VSHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
I LEG +V + G H+A + G+++ FGD F H R S P
Sbjct: 177 ISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGT-----FGVLGHGNRESF--SCPRE 229
Query: 291 EE---------VVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHS 330
E V CG +HT + G+L+TWG + LG G +
Sbjct: 230 VESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLK 289
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
P V + +++CG T + + G+IL+ G
Sbjct: 290 PTCV-ASLIDYDFCRIACGHSLTVGLTTSGQILSMG 324
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 144/316 (45%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G V++ G + G+LG N
Sbjct: 373 ESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLG-HGNRNSCDR 431
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ KEVV I+ G HS+ IT GEL+ WGK G+LG G ++ P VE
Sbjct: 432 PRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKP--KLVEA 489
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G+ A G Q++ +T V SWG G G+LG G S P+
Sbjct: 490 LKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGG---------SDGCKIPQK 540
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
++ L G V G S + ++G VY +G ++ +H RRP ++ L
Sbjct: 541 VEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKN 600
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE++TWG N+ G LG GS + P R+ +++V+CG
Sbjct: 601 VISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRP-RLVAALQGKKINRVACG 659
Query: 350 WKHTAAISEGKILTWG 365
H+ A S K + G
Sbjct: 660 SAHSLAWSTSKPVNAG 675
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 153/332 (46%), Gaps = 29/332 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG P C A +L+ + GG TLF VYATG G
Sbjct: 313 WGHNHRGQLGGVEGAKVKLPTPCDALA--ALRPVQLIGGEQTLF-----AVYATGYGAGG 365
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE++ WG+ +G+LG
Sbjct: 366 RLGIGGTESVSSPTLLESIQHVHIKK--VAVNSGGKHCLALSSEGEVFSWGEAEDGKLGH 423
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S +T G++ +WG G GRLGHG
Sbjct: 424 GNRNS--CDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGD---- 477
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+GV+V A +G + CI ++ V+ +GD K+
Sbjct: 478 -----SEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGS 532
Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P + L +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 533 DGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRK 592
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
V ++ + + A +G++ TWG
Sbjct: 593 VAALQGKNVISIATGSLHCVACTDQGEVFTWG 624
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ S RP V + + +A GGAH+ +T TG ++ G +G+
Sbjct: 413 WGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGR 472
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ ++P + LK V+ ++ +G + IT D ++ WG G+LG G
Sbjct: 473 LGHGDSED-QMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG- 530
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP KVE L G + G + SVA+T G V +WG G RLGHG + +
Sbjct: 531 -GSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHV-- 587
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G V A G LH + G V+ +GD ++ +
Sbjct: 588 -------RRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIP 640
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG H+
Sbjct: 641 RPRLVAALQGKKINRVACGSAHS 663
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P A + + CG ++ LT++GCVY G D+ +
Sbjct: 519 WGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHR 578
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + P +++ L+ K V+ I+TG H A T GE++ WG N GQLG G +
Sbjct: 579 LGHGSD-DHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTS 637
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
A IP P V L G + A G S+A
Sbjct: 638 A--IPRPRLVAALQGKKINRVACGSAHSLA 665
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 168 PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
PT +E + + K+ A+ G + +A++ G+V SWG G+LGHG +S
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSC-------- 429
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
PR+I+ L G +V AAG HSACI G ++ +G ++ + +P L+
Sbjct: 430 -DRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVE 488
Query: 286 KLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
L +V CG T +T +++WG + G LG G D P++V+ +
Sbjct: 489 ALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG 548
Query: 342 PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDR 386
V +V CG + + A+++ G + TWG G H GH S + R
Sbjct: 549 VV-KVECGSQFSVALTKSGCVYTWGKGDYHRL----GHGSDDHVRR 589
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 155/330 (46%), Gaps = 28/330 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--P 331
P I + + + CG HT ++T G +YT+G +G LG+G + + P
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
F V VSCG HT + ++
Sbjct: 341 TLCSN-FLRFIVQLVSCGGCHTLVFATPRL 369
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 19/270 (7%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KST--VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P ++ + CG YH+ +T+ G+LYT+G E G LG+ + +++ R+ P
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRMPQPVP 239
Query: 340 ESP--VDQVSCGWKHTAAISEGKILTWGWG 367
P V QV+CG HT ++E + T+G G
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 32/307 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G +++ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVC---------VPQQVTV--GKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
+YT+G + G LG+G+ S + + + ++CG HTA I++ G + T+
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTF 319
Query: 365 GWGGSHG 371
G G HG
Sbjct: 320 G-DGRHG 325
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 157/346 (45%), Gaps = 37/346 (10%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 3949 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4006
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P + L+ +++ +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4007 GRLGIGGTDSVS-TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4065
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4066 GNRDS--YDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQ 4123
Query: 218 LG----FLRST--------------------SEYTPRLIKELEGVKVKIAAAGFLHSACI 253
L LR+T +P I+ L G+ V G S +
Sbjct: 4124 LQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVAL 4183
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G VY +G ++ +H RRP ++ L + + G H + GE++T
Sbjct: 4184 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFT 4243
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
WG N+ G LG G++ + P VQ + +V CG HT A+S
Sbjct: 4244 WGDNDEGQLGDGTVTAIQRPRLVQS-LQGKHIVKVICGSAHTLALS 4288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 141/318 (44%), Gaps = 18/318 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 2965 GEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3024
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + L S K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3025 KLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNC 3084
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P V L G Q A G Q++ +T G V SWG G G+LG G
Sbjct: 3085 TQL--KPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG------ 3136
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P ++ L GV V G S + + G V+ +G ++ H R
Sbjct: 3137 ---SEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVR 3193
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+P+ I L + V G H +T G+++ WG N++G G G+ V P V G
Sbjct: 3194 KPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLG- 3252
Query: 338 FSESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 3253 LDGVFVNRVACGSSHSVA 3270
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3018 WGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3077
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T +G ++ WG G+LG G
Sbjct: 3078 LGHGDNCT-QLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +VE L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3136 -GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHV-- 3192
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P I+ L G KV A G LH + ++G+V+ +GD D GN
Sbjct: 3193 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDN--DHGQQGSGNTVV 3243
Query: 279 -RRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3244 NKKPNLVLGLDGVFVNRVACGSSHS 3268
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 164/341 (48%), Gaps = 28/341 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 2911 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHISGGSKSLFIVSQDGKLYACGEG 2967
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 2968 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3026
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3027 GHGNRV--TLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3082
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
+ ++ P+L+ L+G +V A G + C+ E G V+ +GD K+
Sbjct: 3083 -------NCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3135
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
P + +L ++ CG + LT GE++TWG + LG G+ + P
Sbjct: 3136 GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKP 3195
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+QG V V+ G H A+++ G++ WG HG
Sbjct: 3196 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVFAWG-DNDHG 3234
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 49/305 (16%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
V GLND QLG ++ L+P+ ISG K + +S D
Sbjct: 2909 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQ----------D 2958
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG +P P +V L+ K+ A+ G + ++A+T GKV
Sbjct: 2959 GKLYACGEGTNGRLGLGHN--NNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVF 3016
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG R T E P+L++ L +++ A G HSA I +G +
Sbjct: 3017 SWGEGEDGKLGHGN--------RVTLE-KPKLLESLRTKRIRDIACGSSHSAAITSSGEL 3067
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSN 315
Y +G ++ + +P L++ L +V CG T LT G +++WG
Sbjct: 3068 YTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3127
Query: 316 ENGCLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG--- 368
+ G LG G + V H ER+ G V Q+ CG + + A+++ G++ TWG G
Sbjct: 3128 DFGKLGRGGSEGCSVPHQVERLNG----VGVVQIECGAQFSLALTKIGEVWTWGKGDYYR 3183
Query: 369 -SHGT 372
HGT
Sbjct: 3184 LGHGT 3188
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A C G H + L+ G VY+ G + G+LG + + P +I+ L+K+V I G +
Sbjct: 583 AAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEV-PTKIA-LEKQVTAIYAGASY 640
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+A++ GEL+ WG+ + G+LG G K +P T+V+ L ALG S+AV
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGNSDDKFVP--TQVQALKAYKVVDVALGSGDAHSMAV 698
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSA 251
T GG + +WG G G+LG+G + +P L ++EGV V +G S
Sbjct: 699 TDGGLLFAWGDGDFGKLGNG-----------SCNGSP-LPVQIEGVSSVARIYSGSQFSV 746
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ +G +Y +G ++ H+ P L+ L + +V G H LTS GEL
Sbjct: 747 ALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGEL 806
Query: 310 YTWGSNE 316
Y WG N+
Sbjct: 807 YGWGRND 813
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 137/300 (45%), Gaps = 32/300 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
++ +AC +T +G +Y+ I + ++ P + GL+ V+QI+
Sbjct: 536 VRQVACTENSIYIVTTSGQLYS----------IHSSCAETVAPKLVEGLEGVSVIQIAAH 585
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
H+ A++ GE+Y WG G+LG G A+K +P +E ++ I+ G
Sbjct: 586 CEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA-----GASY 640
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
S AV+ G++ +WG G GRLGHG S ++ P ++ L+ KV A +G
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGN---------SDDKFVPTQVQALKAYKVVDVALGSG 691
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
HS + + G ++ +GD K+ N + P I + + G + L+
Sbjct: 692 DAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYSGSQFSVALSYD 751
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G LY+WG G LG G+ + + P+ V + VD V+ G H A+ S G++ WG
Sbjct: 752 GTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVD-VAVGSAHCLALTSSGELYGWG 810
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + ++ P A + + + AL G AH++ +T+ G ++A G DF
Sbjct: 653 WGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDF 712
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G L P++I G+ V +I +G S A++ DG LY WGK G+LG G
Sbjct: 713 GKLGNGSCNGSPL-PVQIEGVSS-VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNS 770
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+P V L G A+G +A+T G++ WG
Sbjct: 771 EHS--NVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ GRLG G S+ P A EK + A+ G +++ ++ G ++ G +G+
Sbjct: 603 WGAGEGGRLGHGDTASKEVPTKI-ALEKQ-VTAIYAGASYSAAVSSVGELFTWGRGTYGR 660
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N P ++ LK +VV ++ +G HS A+T G L+ WG G+LG G
Sbjct: 661 LG-HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGS 719
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+P ++E +S + + G + SVA++ G + SWG G GRLGHG
Sbjct: 720 CNGS--PLPVQIEGVSSV--ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN------ 769
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
S P+L+ LEG K+ A G H + +G +Y
Sbjct: 770 ---SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELY 807
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 21/260 (8%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S+ + ++ +WG N QLG G K +KV +PT LS + + G + V+
Sbjct: 2901 SSNEISSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHISGGSKSLFIVSQD 2958
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GK+ + G G +GRLG G +++ TPR + L VK A +G H+ +
Sbjct: 2959 GKLYACGEGTNGRLGLGHNNNV---------PTPRQVPILNQYVVKKVAVHSGGKHAMAL 3009
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ +P L+ L ++ CG H+ +TS GELYT
Sbjct: 3010 TLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYT 3069
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWG- 367
WG E G LG G P+ V V QV+CG + + EG + +WG G
Sbjct: 3070 WGLGEYGRLGHGDNCTQLKPKLVTA-LQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3128
Query: 368 -GSHGTFSEDGHSSGGQLDR 386
G G +G S Q++R
Sbjct: 3129 FGKLGRGGSEGCSVPHQVER 3148
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 117/311 (37%), Gaps = 100/311 (32%)
Query: 144 LYMWGKNSNGQLGLGKKAAKV-IPIP---------------------------------- 168
++ WG N GQLG G +++ +P P
Sbjct: 3946 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004
Query: 169 ----------------TKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLG 210
T VE L + K+ A+ G + +A++ G+V SWG G G+LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------- 263
HG S + R P+LI+ L G+ V A G HSACI G V +G
Sbjct: 4065 HGNRDS---YDR------PKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRL 4115
Query: 264 ------DRAVDK-------MLFQEGNHARRPSLISKLPYSE---------------EVVC 295
D+ K ++ G A SL ++P +V C
Sbjct: 4116 GHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVEC 4175
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G + LT G +YTWG + LG G+ D + P++V + ++ G H A
Sbjct: 4176 GSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAA-LQGKKIISIATGSLHCVA 4234
Query: 356 ISE-GKILTWG 365
S+ G++ TWG
Sbjct: 4235 CSDSGEVFTWG 4245
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLG G+ E P + A E + +A G AH L LT +G +Y G ND+ Q
Sbjct: 757 WGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQ 816
Query: 103 LGISENIGYSLEPL 116
+ S G S +P+
Sbjct: 817 ICPS---GVSRDPI 827
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P IS L
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE-KDRIIEIAACH 317
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 318 LAHTSAAKTQGGHVYMWG 335
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G V+ +G A ++ N
Sbjct: 80 LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137
Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS ++ EV CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 138 HGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197
Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGS 369
V G V ++CG A ++ G++ WG+ G+
Sbjct: 198 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 234
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LHS C+++
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRK-VCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 62 GCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLG-NG 120
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 121 TTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-- 178
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGS---------SG 229
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
+ TP I L+G++V+ A G+ H+ + ++G+VY +G + ++ GN + +
Sbjct: 230 NHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQL--GTGNKSNQSYPT 287
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 288 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 321
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 25/319 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++T ++ G N G LG+ + I ++E
Sbjct: 16 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGD-IQSTIE 74
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G +P
Sbjct: 75 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTN 134
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 135 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGS---------TANQPIPRRV 184
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-- 288
L+ V A G + S + ++G VY++G ++ L GNH+ P I+ L
Sbjct: 185 TGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHST-PCRIAALQGI 243
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 244 RVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAAC 302
Query: 349 GWKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 303 HSTHTSAAKTQGGHVYMWG 321
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
+T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 47 MTVNDEIFVLGTNCCGCLG-------LGDIQSTIE--PRRLDSLSGKKIACLSYGSGPHI 97
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
G V+ +G A +++ NH P IS +++V+ CG YH+ VLTS G
Sbjct: 98 VLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 157
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
E++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 158 EVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGY 217
Query: 367 GGS 369
G+
Sbjct: 218 NGN 220
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS + P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 214 VWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYG 273
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 274 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 326
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 327 --SVILPHLTHLSCTDDVF 343
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP V++AA LHS C+++
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C HT+A G + WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ + ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+ + + G +Y +G + ++ GN
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269
Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
+ + + + E +V C HT S G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 134/297 (45%), Gaps = 25/297 (8%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+LT+ V+ G N G LG + +EP RI L K +V +S G H
Sbjct: 29 AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ +NG VY +G ++ + P I+ L E+VVCG HT LT G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
WG+N G LG G+ P +V E V+ +C HT+A G++ WG
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 28/206 (13%)
Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
Q L F Q V G G +V G SG LG G SI+ PR
Sbjct: 15 QEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSII---------EPR 65
Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
I L G + V ++ H + +G VY +G A ++ N A P +LI
Sbjct: 66 RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+K S V CG +H+ VLT GE+Y WG N +G +G GS P +V V
Sbjct: 126 NKKAIS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183
Query: 345 QVSCGWKHT-AAISEGKILTWGWGGS 369
++CG + A + G++ WG+ G+
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGN 209
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|456861134|gb|EMF79839.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
weilii serovar Topaz str. LT2116]
Length = 506
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 139/299 (46%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLIPGIDDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL+ +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANNLNADSFSMNPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A P KVE LSGI KQ A G + +A+ GK+ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L + AG S I ++G V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + ++V+ CG H VL GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTQKVYEPNKAVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 145/317 (45%), Gaps = 31/317 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY TG N+FGQLG + G + + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSIRNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
S AI +G +Y WG N+ GQLG+G + A P PT + + A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLIPGIDDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
F ++ + G V+++G G+LG+G + L + S P + L V IA
Sbjct: 247 FNHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMNPVAVVGLRDVIQVIA- 300
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + N A+ P + L +++ G H
Sbjct: 301 -GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359
Query: 301 CVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
L S G++Y+WG N +G LGI GS + P +V + S V + G + + +
Sbjct: 360 LALASDGKIYSWGLNASGQLGIGGNGSPNPTPIPTQVLNILNASSV--WAGGTQSFSILK 417
Query: 358 EGKILTWGWGGSHGTFS 374
G++ WG G+ +
Sbjct: 418 SGEVKGWGANGNTANLA 434
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 29/268 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ + P L
Sbjct: 178 RNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
I ++ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 IPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESP 342
L +V+ G H+ LT GE+Y WG N+ G LG G + + +P +V+G S
Sbjct: 292 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEG---LSG 348
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ Q++ G H A+ S+GKI +WG S
Sbjct: 349 IKQIANGRDHILALASDGKIYSWGLNAS 376
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + + P K + GI G + + G G++ WG G LG
Sbjct: 434 AIGETNTQKVYEPNK--AVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 23/304 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 93 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 151
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 152 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 209
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 210 PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 260
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 318
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P ++ K E C HT T GG +Y WG + + + S + V F+
Sbjct: 319 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFA 378
Query: 340 ESPV 343
V
Sbjct: 379 TPAV 382
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 140/318 (44%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 47 KWPIFSLCSEEELQLVRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 105
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 165
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 166 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 215
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ G + P I+ L
Sbjct: 216 TGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR 275
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 276 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVE-KDRIIEIAACH 334
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 335 SAHTSAAKTQGGHVYMWG 352
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS----GIFT----------KQAAL--- 184
G + M K+ G+ + K V P+ ++ L IF+ +QA +
Sbjct: 11 GRVKMPEKDGGGEADMSKAVKPVRATPSSLKMLDVGKWPIFSLCSEEELQLVRQACVFGS 70
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
+ + T ++ G G LG LG ++ST E PR + L G K+ +
Sbjct: 71 AGNEVLYTTVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLS 121
Query: 245 AGF-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHT 300
G H G V+ +G A ++ NH P IS +++V+ CG YH+
Sbjct: 122 YGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 181
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
VLTS GE++ WG N +G +G GS P RV G V ++CG + A+ + G
Sbjct: 182 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTG 241
Query: 360 KILTWGWGGS 369
++ WG+ G+
Sbjct: 242 EVYVWGYNGN 251
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 245 VWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 304
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 305 QLGTGNKSNQSY-PTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 353
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
+T+G N +G LG P ER+ G V Q+ CG HT A + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312
Query: 365 GWGGS 369
G G S
Sbjct: 313 GHGPS 317
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ ++ + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT-LNDIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 141/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + +
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGN---------QL 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LHS C+++
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG G+ + L SP + E V+ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKVCV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 30/213 (14%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 33 EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83
Query: 248 -LHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ +G + + EV CG +H+ L
Sbjct: 84 GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
+ GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTP 224
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 150/321 (46%), Gaps = 23/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 3003 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3061
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3062 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3120
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A ++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3121 DNATQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3175
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3176 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3229
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3230 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3289
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
QG + +V+CG H+ A
Sbjct: 3290 QG-LEGQKITRVACGSSHSVA 3309
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2947 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3006
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3007 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3065
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3066 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3176
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3177 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3232
Query: 386 RGQLT 390
+ Q+
Sbjct: 3233 KPQMV 3237
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 18/291 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG N P I L+ EVV I+ G
Sbjct: 4031 AVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 4089
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GEL+ WGK G+LG G ++ P V+ L G + G Q++
Sbjct: 4090 HSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDALQGHRVIDVACGSGDAQTLC 4147
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L G+ V G S
Sbjct: 4148 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4258
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
YTWG N+ G LG G+ + + P R+ +++V+CG HT A S K
Sbjct: 4259 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 4308
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + + LA G H L L+ G V++ G D G+LG + Y EP I+
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDAT-YLEEPTMIA 528
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV I+ G +S+ IT+DGELY WG+ + G+LG G + P+ V L
Sbjct: 529 AFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 586
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 587 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 637
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
++L+ + + G S + ++G+VY +G ++ H R P L+ L +
Sbjct: 638 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 697
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNE 316
+V G H LT GE+++WGSN+
Sbjct: 698 VDVAVGSTHCLALTDDGEVHSWGSND 723
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4051 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4110
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4111 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4169 -GSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4225
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4226 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4278
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4279 RPRLVAALQGKKINRVACGSAHT 4301
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3057 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3174
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3175 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3232 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3281
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3282 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3312
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 144/297 (48%), Gaps = 24/297 (8%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 3980 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 4037
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 4038 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4095
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 4096 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4146
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAV 4206
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
YTWG + LG GS D + P +VQG V ++ G H +E G++ TWG
Sbjct: 4207 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4262
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 41/319 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + + + C L L+ +G VY +L P+ I L
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 476
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G A + PT + +G
Sbjct: 477 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--ATYLEEPTMIAAFNG-- 532
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S +T G++ +WG G GRLGHG S + TP L
Sbjct: 533 -KQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGS---------SEDQTTPML 582
Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L+G+KV A +G + + ENG+V+ +GD K+ + + P L+ KL
Sbjct: 583 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 642
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+ +V CG + LT G++YTWG +N LG G+ + + P+ + + VD V+
Sbjct: 643 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD-VA 701
Query: 348 CGWKHTAAIS-EGKILTWG 365
G H A++ +G++ +WG
Sbjct: 702 VGSTHCLALTDDGEVHSWG 720
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2985 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 3044
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3045 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3102
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG ++ L P+L+K L G +V A G +
Sbjct: 3103 SGELYSWGLGEYGRLGHGDNATQL---------RPKLVKVLLGHRVIQVACGSRDAQTLA 3153
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3154 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3213
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3214 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3271
Query: 370 HG 371
HG
Sbjct: 3272 HG 3273
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 31/288 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + +AF KH + +ACG ++ +T G +Y G
Sbjct: 505 WGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAVITIDGELYTWGR 563
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 564 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 623
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 624 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 681
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQE 274
+ P+L+ L+G KV A G H + ++G V+ +G DK+ F
Sbjct: 682 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN--DKLQHFDT 730
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ ++P + L + + CG G+ + W S +G+
Sbjct: 731 LSNKKQPKALPGLKHIVGISCG---------PGQSFAWSSCSEWSVGL 769
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2939 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2996
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GK+ + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3048
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+
Sbjct: 3049 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3108
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3109 WGLGEYGRLGHGDNATQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3166
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 125/303 (41%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 3940 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3998
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 3999 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4058
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 4059 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4109
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4110 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4169
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4170 SDGCKIPMKIDS-LTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4224
Query: 384 LDR 386
+ R
Sbjct: 4225 VRR 4227
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4209 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4268
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4269 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4303
>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 151/337 (44%), Gaps = 23/337 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G G+LG G LE + P + S+ LACGGAH + LT G V+ G
Sbjct: 19 WGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTWGRGT 78
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG E + SL P +S L+ V+ +S G+ HS ++ G L+ G S GQLG G
Sbjct: 79 TGQLGHGEMLN-SLHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSFGQLGQG 137
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P+ KV+ + F Q A G S+ + G +V +G+G G+LG ++
Sbjct: 138 NYRSQSTPV--KVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGKRGQLGISRD---- 191
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
++ S P++ LE V++ +A HSA I +G +Y +G F + A
Sbjct: 192 ---KTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRG------FAGASDA 242
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL-GIGSID-VLHSPERVQG 336
P L + G H +LT E+ G N +G L + + V H PE G
Sbjct: 243 NFPQLSLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRPEDSPG 302
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
+ AA +E LTWGW G HG
Sbjct: 303 TALNEVIGLDGVKVVKIAAGAEHSALTWGW-GEHGQL 338
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSW 201
+++ WG + GQLG GK + +P + LS + A G +A+T GG+V +W
Sbjct: 15 QIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTW 74
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G +G+LGHG+ +L L P+ + L+ + +AG+ HS + + G ++
Sbjct: 75 GRGTTGQLGHGE---MLNSLH------PKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFT 125
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
GD + ++ +GN+ R S K+ Y ++ CG H+ VL +G ++Y +GS +
Sbjct: 126 CGDGSFGQL--GQGNY-RSQSTPVKVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGK 182
Query: 317 NGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
G LGI ++ P+ G + + +S H+AAIS +G + TWG G
Sbjct: 183 RGQLGISRDKTKSINLPQVTCG-LEDVQIVSISANGDHSAAISADGHLYTWGRG 235
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 123/297 (41%), Gaps = 23/297 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + + P S+ + + ++ G +H+ F+++ G ++ G FGQ
Sbjct: 74 WGRGTTGQLGHGEMLNSLHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSFGQ 133
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N P+++ V QI+ G HS + ++Y +G GQLG+ +
Sbjct: 134 LG-QGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGKRGQLGISRDK 192
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K I +P L + + + S A++ G + +WG GF
Sbjct: 193 TKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGR---------------GFA 237
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--R 279
++ P+L L ++ AA G+ H + + V + G + E A
Sbjct: 238 GASDANFPQL--SLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKH 295
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGE--LYTWGSNENGCLGIGSIDVLHSPERV 334
RP +E + G + +G E TWG E+G LG+G+ + P+ V
Sbjct: 296 RPEDSPGTALNEVIGLDGVKVVKIAAGAEHSALTWGWGEHGQLGLGNTNDQTIPQTV 352
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWK 351
+ CGG H LTSGG ++TWG G LG G ++ LH P+ V + VS GW
Sbjct: 55 LACGGAHVIALTSGGRVFTWGRGTTGQLGHGEMLNSLH-PKPVS-SLQSCVITHVSAGWS 112
Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
H+ +S+ +L GS G + + R Q TP
Sbjct: 113 HSGFVSDIGLLFTCGDGSFGQLGQGNY-------RSQSTP 145
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+LY WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L GV V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4314
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4315 SAHTLAWSTSK 4325
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +VV G H LT E+Y
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVY 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ R+ P P KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTL-------RITKP---DPTALPGLDSKHIVGIACGPAQSFAW 777
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 3021 GEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3079
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3080 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3138
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3139 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3193
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3194 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3248 HVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILT 363
QG + +V+CG H+ + + + T
Sbjct: 3308 QG-LEGQKITRVACGSSHSVSWTTMDVAT 3335
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3025 NGRLGLGLSSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3250
Query: 386 RGQLT 390
+ Q+
Sbjct: 3251 KPQVV 3255
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHT 4318
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVSWTT 3330
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-------SDILG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G E +D
Sbjct: 656 QDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDV 715
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 716 VA-GSTHCLALTEDSEVYSWG 735
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYSWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWG-DND 3289
Query: 370 HG 371
HG
Sbjct: 3290 HG 3291
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AG H + E+ VY +G + D +
Sbjct: 696 EHV---------RYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISK 286
+ + P L SK
Sbjct: 747 RITKPDPTALPGLDSK 762
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3126
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G +Y +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4187 SDGCKVPMKIDS-LTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4241
Query: 384 LDR 386
+ R
Sbjct: 4242 VRR 4244
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4320
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G AC + NGRVY + + L Q SL S+
Sbjct: 449 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDILGPQLVQ--------SLASRNIVKIA 500
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+++WG + G LG G L P+ + G + V ++CG
Sbjct: 501 AHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + + G H L LTE VY+ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ +P + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-----DPTALPGLDSKHIVGIACGPAQSFA 776
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 133/273 (48%), Gaps = 21/273 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 5 GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 63
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A ++I
Sbjct: 64 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLI 123
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 124 PRRV-TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SGN 173
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
+ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + + P
Sbjct: 174 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPAP 231
Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
++ K E C HT T GG +Y WG
Sbjct: 232 VVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 264
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 17/274 (6%)
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQL 155
N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+ QL
Sbjct: 2 NCCGCLGLGD-VQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++P LS + A G S+ +T G+V +WG SG++G G +
Sbjct: 61 GNGTTNHGLVPCHISTN-LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ L R T +++ + A G + S + G VY++G ++
Sbjct: 120 NQLIPRRVTGCLQNKVVVNI--------ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 171
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ P I+ L + V CG HT VLT G++Y WG+N G LG G+ P
Sbjct: 172 GNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAP 231
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
V + ++ +C HT+A G + WG
Sbjct: 232 VVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 264
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR ++ L G K+ + G H G V+ +G A ++ N
Sbjct: 9 LGDVQSTIE--PRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 66
Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS ++ EV CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 67 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRR 126
Query: 334 VQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGS 369
V G V ++CG + A ++ G++ WG+ G+
Sbjct: 127 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 163
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 157 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 216
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 217 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 269
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 270 --SVTLPHLTHFSCTDDVF 286
>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
Length = 850
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 139/340 (40%), Gaps = 18/340 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN LG + + P + + + + +A G T + G +++ G + Q
Sbjct: 4 WGNTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSHTRPQ 63
Query: 103 LGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+ +G++ L + GL+ E + H A+T+ GE+Y WG NS QLG
Sbjct: 64 NDVKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVN 123
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P K+ L G Q G S AV+ G + +WG GG GRLGHG +
Sbjct: 124 NR----PMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDV---- 175
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R+ EG++V A G HS C+ E+G +Y FGD K+ + R
Sbjct: 176 ----NVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRR 231
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
+P I +VVCG + ++ G LY WG LG G+ V+ P +
Sbjct: 232 QPERIDFDIV--KVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNT 289
Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
VD A G++ WG HG D S
Sbjct: 290 HKVVDCALSSEHGVAVTDRGEVFVWG-ANDHGQLGADAGS 328
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 52/187 (27%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACG--GAHTLFLTETGCVYATGLND 99
WG G YGRLG G+ + P +AF E + +ACG AH++ +TE G +Y+ G D
Sbjct: 159 WGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGD 218
Query: 100 FGQLG--------ISENIGYSL-------------------------------------- 113
FG+LG E I + +
Sbjct: 219 FGKLGHGTNDRRRQPERIDFDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVI 278
Query: 114 -EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+P L +VV + H A+T GE+++WG N +GQLG + K I P +V
Sbjct: 279 WQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGADAGSEKTIIAP-RV 337
Query: 172 ECLSGIF 178
L G F
Sbjct: 338 IKLPGEF 344
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G RLG G+ W+P A H + A H + +T+ G V+ G ND G
Sbjct: 261 VWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHG 320
Query: 102 QLG 104
QLG
Sbjct: 321 QLG 323
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Query: 57 ESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+SR+ + S F +K ++CG HT + ++G V+ G NDFGQLG + +
Sbjct: 20 KSRFAEDLSSHFFVRNDPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFG-HTKIVNK 78
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKV 171
P + LK + + ++ G H+ T +++ +G NS+GQLG+G + +P I T +
Sbjct: 79 PSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDL 138
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
E + I A G S +T G V WG G+ G E+ +L PR
Sbjct: 139 EKTNNIIALSA--GCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLN---------PRK 187
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I E + + + G+ H+A I G+VY FG+ K+ R L + +P
Sbjct: 188 I-EFQN-PINSISCGYYHTAFISL-GKVYTFGEDDNGKL-------GRSDKLPNDVPEGV 237
Query: 292 E-------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPV 343
E V CGG HT +LT G+ Y +GSN +G LG+G+ + S P+RV F++ V
Sbjct: 238 ELDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVN--FTDENV 295
Query: 344 D--QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
+ V+CG H+A ++ EGK+ T G G + +ED
Sbjct: 296 NLIYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNED 331
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 141/286 (49%), Gaps = 25/286 (8%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRP-VVCSAFEK-HSLKALACGGAHTLFLTE 88
IS+ + FA +G G+LG+G L+ RW P ++ + EK +++ AL+ G H+ FLTE
Sbjct: 102 ISTECNKIFA--FGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTE 159
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G VY G N GQ GI +N Y L P +I + + IS GY+H++ I++ G++Y +G
Sbjct: 160 EGSVYIWGDNSDGQCGI-KNENYLLNPRKIE-FQNPINSISCGYYHTAFISL-GKVYTFG 216
Query: 149 KNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
++ NG+LG K +P + C+S G ++ +T GK ++G+ S
Sbjct: 217 EDDNGKLGRSDKLPNDVPEGVELDENCIS------VKCGGSHTIILTESGKAYAFGSNFS 270
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG LG + R+ E V + G HSA + + G++Y GD
Sbjct: 271 GQLG-------LGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGR 323
Query: 267 VDKMLFQ-EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
K+ + E + P+ I + V CGG HT VL +L
Sbjct: 324 NGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKALKL 369
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 36/347 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
L+G D+G+LG G + +P + + +ACG +HTL TE ++A G N G
Sbjct: 59 LFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDG 118
Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + + + + L+K ++ +S G HHS+ +T +G +Y+WG NS+GQ G+
Sbjct: 119 QLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNSDGQCGI-- 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + P K+E + I + G+ + A GKV ++G +G+LG
Sbjct: 177 KNENYLLNPRKIEFQNPI--NSISCGYYHT-AFISLGKVYTFGEDDNGKLGR-------- 225
Query: 220 FLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ P + EL+ + + G H+ + E+G+ Y FG ++ GN
Sbjct: 226 -----SDKLPNDVPEGVELDENCISVKCGG-SHTIILTESGKAYAFGSNFSGQLGL--GN 277
Query: 277 HARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNENG--CLGIGSIDVL 328
S+ ++ +++E V CG H+ LT G+LYT G NG C S ++
Sbjct: 278 FETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDESTNIC 337
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
+P ++ F VSCG HT +++ L S +E
Sbjct: 338 -TPTTIE-MFKSFFCTYVSCGGCHTMVLAKALKLENHENASECIINE 382
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTS-GGELYTWG 313
P ++ K E C HT S GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 318 SAHTSAAKSQGGHVYMWG 335
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + ++ACG ++ + +TG VY G N G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 236 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ + P P VE I A S A + GG V WG
Sbjct: 295 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG +G ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A + G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFCCTDDVF 357
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + +ACG H+L LT+ G V+A G N+ G
Sbjct: 103 WGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCG 162
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + NI + + + G K+ VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 163 QVGSGATANISTPRKVVSVLGGKR-VVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGN 221
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P KV L+G+ QAA G+ S+A++ G + +WGA G+LG G ++++ G
Sbjct: 222 NVNQ--PSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCG 279
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ I E G + IAA + H SA + + G+VY++G
Sbjct: 280 AAK---------IGESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
+GN LGLG + S P K + ALA G G H + TE G +Y+ G N +
Sbjct: 50 FGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYC 109
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + L P RI+G ++ QI+ G HHS +T GE++ WG N+ GQ+G G
Sbjct: 110 QLG-NGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGA 168
Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A I P K V L G A G S+AV G+V WG G+G+LG G
Sbjct: 169 TAN--ISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGN----- 221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ ++ +P + L G+ + AA G+ HS + + G +Y +G
Sbjct: 222 ----NVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWG 262
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ L +SG+K V S G + + +T D E++ +G N N LGLG + + P + C
Sbjct: 18 DDLVVSGVKLACVFGSAG-NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLC 76
Query: 174 LSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
G+F AL F VA T G++ SWG G +LG+G + G L R
Sbjct: 77 KKGMF----ALAFGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQ--GLLPH------R 124
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
+ L K+ A G HS + + G V+ +G ++ + P + +
Sbjct: 125 ITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGG 184
Query: 291 EEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+ VV CG + + GE+Y WG N NG LG+G+ SP +V + + Q +
Sbjct: 185 KRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSS-LNGLIISQAA 243
Query: 348 CGWKHTAAIS-EGKILTWG 365
CG+ H+ A+S EG I TWG
Sbjct: 244 CGYAHSMALSDEGNIYTWG 262
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 76 LAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
LAC G +++T+ V+A G N LG+ + + SL P +I GL KK + ++
Sbjct: 27 LACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGD-VMSSLTPRKIEGLCKKGMFALAF 85
Query: 131 GY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H A T +GE+Y WG N QLG G ++P L Q A G S
Sbjct: 86 GSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGN-LGSCKISQIACGSHHS 144
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR-LIKELEGVKVKIAAAGFL 248
+ +T G+V +WG G++G G ++I TPR ++ L G +V A G
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANI---------STPRKVVSVLGGKRVVSIACGQT 195
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG 306
S + ++G VY +G ++ + P +S L + CG H+ L+
Sbjct: 196 SSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDE 255
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TAAISE-GKILTW 364
G +YTWG+N G LG G+ L ++ G +D + + H +AA+++ GK+ W
Sbjct: 256 GNIYTWGANSYGQLGTGNKANLCGAAKI-GESIGRFIDIAATHYAHISAAMTQTGKVYMW 314
Query: 365 G 365
G
Sbjct: 315 G 315
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V ++G + LG G S L TPR I+ L K + A
Sbjct: 36 NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSL---------TPRKIEGL--CKKGMFALA 84
Query: 247 F---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHT 300
F H ENG +Y +G ++ N P I+ S ++ CG +H+
Sbjct: 85 FGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHS 144
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEG 359
VLT GE++ WG N G +G G+ + +P +V V ++CG + A + G
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSG 204
Query: 360 KILTWGWGGS 369
++ WG+ G+
Sbjct: 205 EVYGWGYNGN 214
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P S+ + ACG AH++ L++ G +Y G N +GQ
Sbjct: 209 WGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQ 268
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + + +T Y H S+A+T G++YMWG+ GQ
Sbjct: 269 LGTGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWGQ-CRGQ------- 320
Query: 162 AKVIPIPTKVECLSGIF 178
+ P+ T+ CL +F
Sbjct: 321 SITSPMETRFTCLDDVF 337
>gi|297792001|ref|XP_002863885.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297309720|gb|EFH40144.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 454
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 178/369 (48%), Gaps = 56/369 (15%)
Query: 25 GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
G+ +R +ST +RR +G+G++G LGL S + P V S + ++
Sbjct: 30 GLVRRQFTSTRGERRTVMSFGDGNHGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISFIS 88
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLG-ISENIGYSL--EPLRISGLKKEVVQISTGYHH 134
G H+L +T G ++A G ND GQLG I+ + G EP R+ GL V + +
Sbjct: 89 AGHYHSLAVTFGGEIWAWGRNDEGQLGRIAVDSGRDSRSEPKRVEGLDN--VNVRAAFAS 146
Query: 135 ---SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
S+AI DG L++WG++ GQLGLGK + +P++VE L+ + +LG+ ++A
Sbjct: 147 GVVSAAIGDDGSLWVWGRSKRGQLGLGKGIIEA-RVPSRVETLAAEHVVKVSLGWGHALA 205
Query: 192 VTGGGKVLSWGAGGSGRLGH---GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+T GKV WG GR+G+ E+S+L + S +K+ + + AA
Sbjct: 206 LTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGS------MKDQHAADLNLEAA--- 256
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSE--EVVCGGYHTCVLT 304
++ V + + +E + A P L+ + + ++ CG H+ +L
Sbjct: 257 ---------------EKKVVEAMSKENDMPIAWEPCLVEETRNVKVADIACGSDHSLILC 301
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKI 361
G L + GSN G LG D+ +P + +ESP+ ++ G H+ AI E KI
Sbjct: 302 HDGTLLSSGSNIYGQLGRSKQDLGMTPVDI----TESPI-SIAAGLGHSLAICNRDERKI 356
Query: 362 LTWGWGGSH 370
L+WGW S
Sbjct: 357 LSWGWNRSR 365
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 20/193 (10%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
W P + + +ACG H+L L G + ++G N +GQLG S+ + P+ I+
Sbjct: 274 WEPCLVEETRNVKVADIACGSDHSLILCHDGTLLSSGSNIYGQLGRSKQ-DLGMTPVDIT 332
Query: 120 GLKKEVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+ + I+ G HS AI E + WG N + QLG GK +P +VE G
Sbjct: 333 ---ESPISIAAGLGHSLAICNRDERKILSWGWNRSRQLGRGKPEH----LPREVEGFDGE 385
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G S+ VT G+ WG G +GRLG G S+ E P L++++EG
Sbjct: 386 SPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGS---------SSDEPEPMLLEDIEG 436
Query: 238 VKVKIAAAGFLHS 250
++ AGF HS
Sbjct: 437 CVLQ-TVAGFDHS 448
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 868 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 927
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 928 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 986 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1042
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 1043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1095
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 1096 RPRLVAALQGKKVNRVACGSAHT 1118
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 828 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 886
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 887 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 944
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 945 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 995
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 996 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1055
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 1056 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 1114
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 1115 SAHTLAWSTSK 1125
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 762 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 819
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 820 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 877
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 878 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 932
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 933 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 987 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1046
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 1047 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 1079
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 815
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 816 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 875
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 876 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 926
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 927 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 987 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 1041
Query: 384 LDR 386
+ R
Sbjct: 1042 VRR 1044
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P +
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKV 63
Query: 121 LK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 64 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQ 121
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
Q G + S+A+T G V +W G HGQ+ G +T P L++ LEG
Sbjct: 122 GVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ----GNGTTTVNRKPTLVQGLEG 177
Query: 238 VKVKIAAAGFLHS 250
K+ A G HS
Sbjct: 178 QKITRVACGSSHS 190
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + H + +ACG A TL LT+ G V++ G DF
Sbjct: 39 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 98
Query: 101 GQLGI--SE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-----ELYMWGKNS 151
G+LG SE NI ++E L G V QI G S A+T G ++Y WG N
Sbjct: 99 GKLGRGGSEGCNIPQNIERLNGQG----VCQIECGAQFSLALTKSGVVWTWQVYAWGDND 154
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+GQ G G V PT V+ L G + A G SVA T
Sbjct: 155 HGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +E L + A G S A+T G++ +WG G GRLGHG +T++
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD---------NTTQL 56
Query: 228 TPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
P+++K L G +V A G + + + G V+ +GD K+ P I
Sbjct: 57 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE 116
Query: 286 KLPYSE--EVVCGGYHTCVLTSGG-----ELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+L ++ CG + LT G ++Y WG N++G G G+ V P VQG
Sbjct: 117 RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-L 175
Query: 339 SESPVDQVSCGWKHTAAISEGKILT 363
+ +V+CG H+ A + + T
Sbjct: 176 EGQKITRVACGSSHSVAWTTVDVAT 200
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 114 EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P I LK K + I+ G HS+A+T GELY WG G+LG G ++ P KV
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV- 63
Query: 173 CLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G Q A G Q++A+T G V SWG G G+LG G S P+
Sbjct: 64 -LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---------SEGCNIPQ 113
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENG-----RVYIFGDRAVDKMLFQEGNHA----RRP 281
I+ L G V G S + ++G +VY +GD Q+GN R+P
Sbjct: 114 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHG----QQGNGTTTVNRKP 169
Query: 282 SLISKLPYSE--EVVCGGYHTCVLTS 305
+L+ L + V CG H+ T+
Sbjct: 170 TLVQGLEGQKITRVACGSSHSVAWTT 195
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 1026 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 1085
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 1086 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 1120
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+P LI L ++ CG H+ LTS GELYTWG E G LG G P+ V+
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64
Query: 338 FSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
V QV+CG + A EG + +WG G
Sbjct: 65 LGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 96
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 32/344 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ + E+G ++ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
P + L ++ GG+H+ LT+ GE+Y WG E+G LG G D
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V E + QVSCG H+ A++ +G+I ++G G HG
Sbjct: 293 PQKVNLLPGEDII-QVSCGGTHSVALTRDGRIFSFG-RGDHGRL 334
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 127/304 (41%), Gaps = 10/304 (3%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V A G + GQLG+ + L + + V + G +S AI DG+L+ WG N
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G LG + K P+ V+ L+ + QAA+G +AV G+ +WG G+ G
Sbjct: 67 RGTLGHPPET-KTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G P+ + + V+ AAG HS + G V+ +G +
Sbjct: 126 EPSKDETGRPVRRDIVIPKRCAQQ--LTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDI 183
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
Q P + L + G +H L G L+ WG+NE G LG G P
Sbjct: 184 KQ----ISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP 239
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHSSGGQLDRGQL 389
VQG + VD + GW TA +EG++ WG G HG F ++ SS + L
Sbjct: 240 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG-RGEHGRLGFGDNDKSSKMLPQKVNL 298
Query: 390 TPSE 393
P E
Sbjct: 299 LPGE 302
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G ++A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSY-PIPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G +P KV L G
Sbjct: 246 DDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDII 305
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R P+ + +L +A GG H+ LT G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L ++++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFT 179
P +P + G F
Sbjct: 340 VTTGQPLELPIHIPPPEGRFN 360
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 147/313 (46%), Gaps = 44/313 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV + G HH
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAIS-KPTCVKALKSEKVVLAACGRHH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G+LY G NS GQLGLG A + T + +S FT KQ + G S
Sbjct: 101 TLVYTEQGKLYSSGGNSEGQLGLGDTAGR-----TSFQEIS-FFTAQYKIKQLSAGSNMS 154
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G+ LG + T TP+ + G + + G+ H
Sbjct: 155 AALTVDGKLFMWGDNSEGQ---------LGLEKGTIYCTPQKVD--TGKPIAWISCGYYH 203
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----------CGGYH 299
SA + ++G +Y FG+ + G P I K + V+ CGG H
Sbjct: 204 SAFVTQDGELYTFGEP-------ENGKLGLPPDKIKKHKKPQRVLGLSGKVTMVSCGGEH 256
Query: 300 TCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
T +T E+YT+G + G LG G+ I H P+ V ++ + V+CG HTA I+E
Sbjct: 257 TIAVTE-KEVYTFGLGQFGQLGHGTFIFETHIPKAVDA-LTKKKIRYVTCGENHTAIITE 314
Query: 359 GKILTWGWGGSHG 371
+L G HG
Sbjct: 315 KGLLYTFGDGRHG 327
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 47/301 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LG+ + + +P A + + ACG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K
Sbjct: 120 QLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEK- 178
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P KV+ +G + G+ S VT G++ ++G +G+LG L
Sbjct: 179 -GTIYCTPQKVD--TGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPP 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------------- 263
+ P+ + L G KV + + G H+ + E VY FG
Sbjct: 229 DKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETH 286
Query: 264 -DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+AVD + + K+ Y V CG HT ++T G LYT+G +G LG+
Sbjct: 287 IPKAVDALTKK------------KIRY---VTCGENHTAIITEKGLLYTFGDGRHGKLGL 331
Query: 323 G 323
G
Sbjct: 332 G 332
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 142/285 (49%), Gaps = 23/285 (8%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + +IS G H+ +T +G+LY++G N+ GQLG+
Sbjct: 19 FGKSKFAENI-----PSKFWLKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGV-- 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I PT V+ L AA G ++ T GK+ S G G+LG G +
Sbjct: 72 EAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTS 131
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + S +T + K+K +AG SA + +G+++++GD + ++ ++G
Sbjct: 132 F-QEISFFTAQY-------KIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYC 183
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGP 337
P + + CG YH+ +T GELYT+G ENG LG+ I P+RV G
Sbjct: 184 TPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGL 243
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGG----SHGTFSEDGH 378
+ V VSCG +HT A++E ++ T+G G HGTF + H
Sbjct: 244 SGK--VTMVSCGGEHTIAVTEKEVYTFGLGQFGQLGHGTFIFETH 286
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL + G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V + G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG +G ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V +SCG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 150/313 (47%), Gaps = 31/313 (9%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L ++ G +A G N G+LG S P+R+ GLK EVV ++ G HS A+ D
Sbjct: 372 HSLAVSADGSAWAWGHNSHGELGDGSTR-NSPAPVRVDGLK-EVVAVAAGSSHSLALLAD 429
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G + WG N+ GQLG G +A+ +P +V L G+ A G S+A+ G V +W
Sbjct: 430 GTVLAWGDNTFGQLGDGTRASH--SVPAQVRGLRGVVA--VAAGSSHSLALLADGTVWTW 485
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G +G+LG G +T Y P +K LEGV V +AA G HS + +G +
Sbjct: 486 GYNLNGQLGDGT---------TTYRYEPVAVKGLEGV-VAVAAGGN-HSLAVRSDGTAWA 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+G+ K +G RP+ + ++ V + + S G + WG+N +G LG
Sbjct: 535 WGENV--KGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLG 592
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
GS P RVQG V V+ G H+ A+S EG + WG + G E
Sbjct: 593 DGSTTSRPMPMRVQG---AGEVVAVAAGNGHSLALSPEGGVWAWG-QNARGQLGE----- 643
Query: 381 GGQLDRGQLTPSE 393
G LDR +L P+
Sbjct: 644 -GTLDR-RLAPTR 654
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 144/297 (48%), Gaps = 27/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G LG GS + PV ++ + A+A G +H+L L G V A G N FGQ
Sbjct: 385 WGHNSHGELGDGSTRNSPAPVRVDGLKE--VVAVAAGSSHSLALLADGTVLAWGDNTFGQ 442
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +S+ P ++ GL+ VV ++ G HS A+ DG ++ WG N NGQLG G
Sbjct: 443 LGDGTRASHSV-PAQVRGLRG-VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTY 500
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V+ L G+ A G S+AV G +WG G+LG G +S
Sbjct: 501 RYEPV--AVKGLEGVVA--VAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTS------ 550
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ K AA G S + +G + +G+ + ++ +G+ RP
Sbjct: 551 -----RPAPVEVKAAAKAVAAAQGL--SLAVGSDGFPWAWGNNSSGQL--GDGSTTSRP- 600
Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ ++ + EVV G H+ L+ G ++ WG N G LG G++D +P RVQG
Sbjct: 601 MPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDRRLAPTRVQG 657
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 34/298 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GG+H+L + + G V+A G N GQLG P+R+ GL VV ++ G HS
Sbjct: 15 IATGGSHSLSVHQDGTVWAVGGNSVGQLG-DGTTSLRRVPVRVLGLSG-VVTVAAGGGHS 72
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG NS+GQLG G + P+ +V LSG+ A G S+AV+
Sbjct: 73 LAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPV--RVRGLSGVVA--VAAGGYHSLAVSAD 128
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK------IAAAGFLH 249
G V +WG SG+LG G E V+V+ AAG H
Sbjct: 129 GTVWAWGNNSSGQLGDGS-----------------FDNRAEPVRVRGSSGVVAVAAGGAH 171
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
S + +G ++ +GD ++ + ++ P + ++ V G H+ +++ G +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTV 231
Query: 310 YTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+ WG N +G LGI + +L P RV P V ++ G H+ A+ +G + WG
Sbjct: 232 WAWGDNSHGQLGIARTTPLLSIPGRV--PEVRGSV-AMAAGDNHSLAVRDDGTVWAWG 286
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 152/329 (46%), Gaps = 34/329 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G+LG G+ R PV + +A GG H+L + G V+A G N GQL
Sbjct: 35 GGNSVGQLGDGTTSLRRVPVRVLGLS--GVVTVAAGGGHSLAVHSDGTVWAWGNNSSGQL 92
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + EP+R+ GL VV ++ G +HS A++ DG ++ WG NS+GQLG G +
Sbjct: 93 G-DGSFDNRAEPVRVRGLSG-VVAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNR 150
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P+ + A G S+AV G + +WG G+LG+ E +
Sbjct: 151 AEPVRVRGSS----GVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFN------- 199
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
S ++++ GV V +AG HS + +G V+ +GD + ++ AR L
Sbjct: 200 -SSEPVQVLRVTGGVTV---SAGANHSLAVSADGTVWAWGDNSHGQLGI-----ARTTPL 250
Query: 284 IS---KLPY---SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+S ++P S + G H+ + G ++ WGSN +G LG G + P RV G
Sbjct: 251 LSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPG- 309
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
V V+ G H+ A+ +G + WG
Sbjct: 310 --LEGVGAVAAGSNHSLAVRDDGTVWAWG 336
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 130/291 (44%), Gaps = 18/291 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG GS ++R PV + A+A GG H+L ++ G V+A G N GQ
Sbjct: 84 WGNNSSGQLGDGSFDNRAEPVRVRGLS--GVVAVAAGGYHSLAVSADGTVWAWGNNSSGQ 141
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + EP+R+ G V + HS A+ DG L+ WG N GQLG +
Sbjct: 142 LG-DGSFDNRAEPVRVRGSSGVVAVAAG-GAHSLAVRSDGILWAWGDNLYGQLG--NRGE 197
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V ++G T A G S+AV+ G V +WG G+LG + + +L
Sbjct: 198 FNSSEPVQVLRVTGGVTVSA--GANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSI-- 253
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + E+ G AAG HS + ++G V+ +G ++ P
Sbjct: 254 ------PGRVPEVRGSVAM--AAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPG 305
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ L V G H+ + G ++ WGSN G G G+ L +P R
Sbjct: 306 RVPGLEGVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTR 356
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G + +I+TG HS ++ DG ++ G NS GQLG G + + +P+ +V LSG+ T
Sbjct: 7 GAARAPARIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPV--RVLGLSGVVT 64
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G S+AV G V +WG SG+LG G + P ++ L GV
Sbjct: 65 --VAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSFD---------NRAEPVRVRGLSGV- 112
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
V +AA G+ HS + +G V+ +G+ + ++ ++ P + V GG H
Sbjct: 113 VAVAAGGY-HSLAVSADGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGAH 171
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
+ + S G L+ WG N G L G+ +S E VQ V VS G H+ A+S +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQL--GNRGEFNSSEPVQVLRVTGGV-TVSAGANHSLAVSAD 228
Query: 359 GKILTWGWGGSHGTF 373
G + WG SHG
Sbjct: 229 GTVWAWG-DNSHGQL 242
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L SR PV A K A +L + G +A G N GQ
Sbjct: 535 WGENVKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGL----SLAVGSDGFPWAWGNNSSGQ 590
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+R+ G EVV ++ G HS A++ +G ++ WG+N+ GQLG G
Sbjct: 591 LGDGSTTSRPM-PMRVQG-AGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDR 648
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
++ P T+V+ LSG+ A F S+AV G V SWG G+LG+
Sbjct: 649 RLAP--TRVQGLSGVVAVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
F WGN G+LG GS SR P+ V A E + A+A G H+L L+ G V+A G
Sbjct: 579 FPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGE---VVAVAAGNGHSLALSPEGGVWAWGQ 635
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG + L P R+ GL V + S A+ DG ++ WG N+ GQLG
Sbjct: 636 NARGQLG-EGTLDRRLAPTRVQGLSGVVAVAAG-GAFSLAVRDDGSVWSWGDNAFGQLG 692
>gi|456888932|gb|EMF99869.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200701203]
Length = 482
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 178 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 235
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 236 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 294
Query: 149 KNSNGQLGLGK-KAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ AA I P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 295 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 352
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 353 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 404
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 405 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 463
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 135/312 (43%), Gaps = 31/312 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 107 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 165
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 166 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 223
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 224 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVIA-- 276
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + L P + L +++ G H
Sbjct: 277 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 336
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 357
L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 337 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNITNASSVWAGGTQSFSILK 393
Query: 358 EGKILTWGWGGS 369
G++ WG G+
Sbjct: 394 NGEVKGWGANGN 405
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 147/341 (43%), Gaps = 28/341 (8%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G ++G+LG G S V+ ++ ++ +++ + + G VY G N GQ
Sbjct: 126 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 185
Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LGI N G P + G+ V+ + G++H+ + DG + +G+N+ G
Sbjct: 186 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 244
Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
QLG G A P V LS + Q G E S A+T G+V WG G LG
Sbjct: 245 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 302
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+G+ S+ + + TP ++ L G+K A G H + NGR+Y +G A ++
Sbjct: 303 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASNGRIYSWGLNASGQL 355
Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN-GCLGIGSID 326
N P+ I + + V GG + + GE+ WG+N N L IG +
Sbjct: 356 GIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 415
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
L E + V CG H A + +G+I WGW
Sbjct: 416 TLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGW 456
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 95 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 153
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ P +
Sbjct: 154 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 209
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 210 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 267
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
L +V+ G H+ LT GE+Y WG N+ G LG G + + +P +V+G S
Sbjct: 268 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG---LSG 324
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ Q++ G H A+ S G+I +WG S
Sbjct: 325 IKQIANGRDHILALASNGRIYSWGLNAS 352
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 75/177 (42%), Gaps = 13/177 (7%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 292 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 349
Query: 98 NDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN-GQ 154
N GQLGI N + P +I + + G S +I +GE+ WG N N
Sbjct: 350 NASGQLGIGGNGSPNPTPNPTQILNITN-ASSVWAGGTQSFSILKNGEVKGWGANGNTAN 408
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L +G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 409 LAIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 463
>gi|418719204|ref|ZP_13278404.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
gi|421094338|ref|ZP_15555056.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410362760|gb|EKP13795.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410744357|gb|EKQ93098.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
Length = 506
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 487
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 136/317 (42%), Gaps = 31/317 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 357
L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 361 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNITNASSVWAGGTQSFSILK 417
Query: 358 EGKILTWGWGGSHGTFS 374
G++ WG G+ +
Sbjct: 418 NGEVKGWGANGNTANLA 434
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 147/341 (43%), Gaps = 28/341 (8%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G ++G+LG G S V+ ++ ++ +++ + + G VY G N GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 209
Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LGI N G P + G+ V+ + G++H+ + DG + +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268
Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
QLG G A P V LS + Q G E S A+T G+V WG G LG
Sbjct: 269 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 326
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+G+ S+ + + TP ++ L G+K A G H + NGR+Y +G A ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASNGRIYSWGLNASGQL 379
Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN-GCLGIGSID 326
N P+ I + + V GG + + GE+ WG+N N L IG +
Sbjct: 380 GIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
L E + V CG H A + +G+I WGW
Sbjct: 440 TLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGW 480
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
L +V+ G H+ LT GE+Y WG N+ G LG G + + +P +V+G S
Sbjct: 292 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG---LSG 348
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ Q++ G H A+ S G+I +WG S
Sbjct: 349 IKQIANGRDHILALASNGRIYSWGLNAS 376
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 373
Query: 98 NDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN-GQ 154
N GQLGI N + P +I + + G S +I +GE+ WG N N
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNITN-ASSVWAGGTQSFSILKNGEVKGWGANGNTAN 432
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
L +G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 433 LAIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 488
>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
Length = 1120
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG G LG G ++ +P + A ++ +ACG H+ +T G +Y G ++
Sbjct: 302 WGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNA 361
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RI+G + ++ ++ G H++ +T G+L+ +G + G LG G
Sbjct: 362 GLLGHGSDVSHWI-PKRIAGPLEGLQIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHG 420
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + + P +VE L G+ T A G + AV GK+ +WG G
Sbjct: 421 DR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKN 478
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G +A + ++GRV+ G V
Sbjct: 479 RLGHGDKEARL---------KPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTMGS-TV 528
Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + + P L+ K+ EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 529 YGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 588
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
I+ +P V+ + V ++CG ++AAI
Sbjct: 589 IEDRKTPALVEA-LKDRHVKYIACGSNYSAAI 619
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 102 QLGISENIGYS--------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
++G +N+ Y PL S + +V I+ G H+S +T GE++ WG+ S G
Sbjct: 250 KVGADKNVNYVSPRADVLLPRPLE-SSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGG 308
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGH 211
LG G K + P VE L+ A G S AVT G++ +WG G +G LGH
Sbjct: 309 CLGHG--VGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGH 366
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + S + P+ I LEG+++ A G H+A + G+++ FGD +
Sbjct: 367 GSD---------VSHWIPKRIAGPLEGLQIAFVACGPWHTALVTSTGQLFTFGDGTFGVL 417
Query: 271 LFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLT-----------SGGELYTWGSNEN 317
+ + P + L + V CG +HT + S G+L+TWG +
Sbjct: 418 GHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDK 477
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
LG G + P V +S +++CG TA +++ G++ T G
Sbjct: 478 NRLGHGDKEARLKPTCVAA-LIDSNFHKIACGHSLTAGLTKSGRVFTMG 525
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 111/253 (43%), Gaps = 40/253 (15%)
Query: 142 GELYMWGKNS--NGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ + N ++G K V P +P +E + A G + VT
Sbjct: 236 GDVYIWGEVTCENVKVGADKNVNYVSPRADVLLPRPLESSVVLDVHHIACGVRHASLVTR 295
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG G LGHG +++ PRL++ L V A G HS +
Sbjct: 296 QGEVFTWGEESGGCLGHGVGKNVV---------QPRLVEALTSTTVDFVACGEFHSCAVT 346
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSG 306
G +Y +GD + L G+ P I+ ++ + V CG +HT ++TS
Sbjct: 347 MAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAF---VACGPWHTALVTST 403
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA----------- 355
G+L+T+G G LG G + P V+ + V+CG HTAA
Sbjct: 404 GQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTI-AVACGVWHTAAVVEVIATHSST 462
Query: 356 -ISEGKILTWGWG 367
IS GK+ TWG G
Sbjct: 463 SISSGKLFTWGDG 475
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 254 DENGRVYIFG-----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
D G VYI+G D+ V+ + + RP S + + CG H +
Sbjct: 233 DALGDVYIWGEVTCENVKVGADKNVNYVSPRADVLLPRPLESSVVLDVHHIACGVRHASL 292
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
+T GE++TWG GCLG G + P V+ + + VD V+CG H+ A++ G++
Sbjct: 293 VTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEA-LTSTTVDFVACGEFHSCAVTMAGEL 351
Query: 362 LTWGWG 367
TWG G
Sbjct: 352 YTWGDG 357
>gi|261329865|emb|CBH12848.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 640
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 164/360 (45%), Gaps = 35/360 (9%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCV 92
++R+ WG+G G LG E P V + F H + +A G +++ L G V
Sbjct: 152 MRRQLLFSWGSGSCGELGTQRFEDCNTPTFVQITPFGVHVVD-VALGASYSCVLASDGNV 210
Query: 93 YATGLNDFGQLGI----------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVD 141
Y G D+GQLG+ + P RIS ++E V ++ GY + A+T D
Sbjct: 211 YTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAVHVAAGYAFAVALTAD 270
Query: 142 GELYMWGKNSNGQLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+Y WG N++GQ GLG ++ + + PT V L G +Q + G ++A+ G
Sbjct: 271 HHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGKHIEQLSCGSFFTLALGTDGT 330
Query: 198 VLSWGAGGSGRLGHGQES-------SILGFLRSTSEYT----PRLIKELEGVKVKIAAAG 246
+ SWG LG+ E SI+G S E T P++++ K+ AG
Sbjct: 331 LYSWGLLDCLGLGNEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPTEHKLVRIHAG 390
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-LISKLP--YSEEVVCGGYHTCVL 303
HS I+ G ++ +G ++ + RP ++ L + +V CG +HT L
Sbjct: 391 QWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTVAL 450
Query: 304 TSGGELYTWGSNENG-CLGIGSIDVLHSPERVQG-PFSESPVDQ-VSCGWKHTAAISEGK 360
T G +Y WG N +G C + D + SP RV F V + ++CG +HT + EG
Sbjct: 451 TDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVNLEFVAGGVARAIACGRQHTVVVMEGP 510
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 35/282 (12%)
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIP 166
++I+ VV ++ G +S + DG +Y +G GQLGLG + V+
Sbjct: 182 VQITPFGVHVVDVALGASYSCVLASDGNVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVT 241
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ A G+ +VA+T V WG G+ G G S LR E
Sbjct: 242 VPQRISMFEREPAVHVAAGYAFAVALTADHHVYFWGNNNHGQSGLGPRSFHCS-LRKVEE 300
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------DRA-------V 267
P L+ LEG ++ + G + + +G +Y +G RA +
Sbjct: 301 --PTLVTTLEGKHIEQLSCGSFFTLALGTDGTLYSWGLLDCLGLGNEAEVRASVTDISII 358
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
K L E + ++P ++V G +H+ + + GEL+TWG G LG G
Sbjct: 359 GKSLSAEERTVVLEPQVVRVPTEHKLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGHGD 418
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V G + V V+CG HT A+++ G + WG
Sbjct: 419 NGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAVYCWG 460
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 151/328 (46%), Gaps = 21/328 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P SA + +K +A GG H + LT G V++ G D
Sbjct: 2979 GEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3038
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3039 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD 3097
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3098 NTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3151
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3152 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3206
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3207 VRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3266
Query: 336 GPFSESPVDQVSCGWKHTAAISEGKILT 363
G + +V+CG H+ A + + T
Sbjct: 3267 G-LEGQKITRVACGSSHSVAWTTVDVTT 3293
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3966 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4024
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT GEL+ WGK G+LG G ++ P V+
Sbjct: 4025 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDA 4082
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4083 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG---------SDGCKVPMK 4133
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4134 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4193
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4194 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4252
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4253 SAHTLAWSTSK 4263
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ +G VY+ G D G+LG + Y EP I+ K+VVQI+ G +
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDAT-YLEEPALITTFSGKQTGKQVVQIACGSTY 513
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+A+T DGELY WG+ + G+LG G +++ + P V L G A G Q++AV
Sbjct: 514 SAAVTADGELYTWGRGNYGRLGHG--SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAV 571
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+L+++L+ + + G S
Sbjct: 572 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + ++ G H LT GE++
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVH 682
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ + D L P + P KH IS G ++ W
Sbjct: 683 SWGSNDK----LQHFDTLF-------PNKKQPKALPGLNSKHIVGISCGPGQSFAW 727
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2923 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2982
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + I IP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 2983 NGRLGLGLSSG-TIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3041
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3042 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3152
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3153 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3208
Query: 386 RGQLT 390
+ Q+
Sbjct: 3209 KPQIV 3213
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3033 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3151 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3207
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3208 ------RKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTTT 3257
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3258 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 146/316 (46%), Gaps = 35/316 (11%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + + C L L+ +G VY +L P+ I GL
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK-----------STTLAPMLIHGL 441
Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ GE+Y WG G+LG G A + P + SG
Sbjct: 442 SSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD--ATYLEEPALITTFSGKQ 499
Query: 179 T----KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
T Q A G S AVT G++ +WG G GRLGHG + TP L+
Sbjct: 500 TGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDV---------TTPMLVTA 550
Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L+G KV A +G + + ENG+V+ +GD K+ + + P L+ KL +
Sbjct: 551 LKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI 610
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V CG + LT G++YTWG +N LG G+ + + P+ + + VD ++ G
Sbjct: 611 VKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD-IAVGS 669
Query: 351 KHTAAIS-EGKILTWG 365
H A++ EG++ +WG
Sbjct: 670 THCLALTDEGEVHSWG 685
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4065
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4066 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4124 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4181 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4233
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4234 RPRLVAALQGKKINRVACGSAHT 4256
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 144/297 (48%), Gaps = 24/297 (8%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ +KK V +++G
Sbjct: 3935 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGK 3992
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 3993 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4050
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 4051 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4101
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 4102 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4161
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
YTWG + LG GS D + P +VQG V ++ G H +E G++ TWG
Sbjct: 4162 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4217
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +IS L VV+ + +G H
Sbjct: 2961 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRH 3020
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3021 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3078
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 3079 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3130 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3189
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3190 TWGKGDYFRLGHGTDVHVRKPQIVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3247
Query: 370 HG 371
HG
Sbjct: 3248 HG 3249
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA ++ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2915 SAASIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2972
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G S + R S + ++K KV + + G H+ +
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 3026
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+WG
Sbjct: 3027 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3086
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3142
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G P + + F K + K +ACG ++ +T G +Y G
Sbjct: 470 WGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRG 529
Query: 99 DFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNG 153
++G+L G SE++ P+ ++ LK ++VV ++ +G + A+T +G+++ WG G
Sbjct: 530 NYGRLGHGSSEDVTT---PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 586
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + P VE L + + G + SVA+T G+V +WG G + RLGHG
Sbjct: 587 KLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 644
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ + P+L+ L+G KV A G H + + G V+ +G
Sbjct: 645 DEHV---------RYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ +A + + +ACG A TL +TE G V++ G D+
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 585
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 586 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 645
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+V SWG+ + +L H
Sbjct: 646 --EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGS--NDKLQH 692
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 125/303 (41%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 3895 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3953
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3954 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4013
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 4014 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4064
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4065 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4124
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4125 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4179
Query: 384 LDR 386
+ R
Sbjct: 4180 VRR 4182
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 580 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 639
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + L+ K+VV I+ G H A+T +GE++ WG N Q L
Sbjct: 640 LGHGTDEHVRY---PKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTL 696
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 697 FPNKKQPKALP 707
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4164 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4223
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4224 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4258
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HT+ TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEG 117
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L S K + Q+S G + S+A+T DG+L+MWG NS GQ+GL
Sbjct: 118 QLGLGDTDERDTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGL- 174
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K + +P +V G + G+ S VT G++ ++G SG+L G S +L
Sbjct: 175 -KDVTNVCVPHQVTI--GKPISWISCGYYHSAFVTIDGELYTFGESESGKL--GLPSQLL 229
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
T+ P+L+ + +++A G H+ + E VY FG + +F+
Sbjct: 230 -----TNHRIPQLVSSIPDKVIQVACGGG-HTLVLTEES-VYAFGLGQFGQLGLGTFIFE 282
Query: 274 EGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ + E+++ CG HT ++T G +YT+G +G LG+G
Sbjct: 283 ----TSEPKVLEYV-KGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLG 330
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 34/290 (11%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ ++G V+ FG+ +ENI P + + +S G HS+ +T + +L
Sbjct: 7 LVPDSGAVFT-----FGKTKFAENI-----PSKFWFKSDTPICLSCGDEHSAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA + PT ++ L K AA G ++ T GG V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--VNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGN 114
Query: 205 GSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G+LG G ++ F TS++ K+K +AG SA + E+G++
Sbjct: 115 NEGQLGLGDTDERDTFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGQL 161
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+++GD + ++ ++ + P ++ + CG YH+ +T GELYT+G +E+G
Sbjct: 162 FMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGK 221
Query: 320 LGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKILTWGWG 367
LG+ S L + R+ S P V QV+CG HT ++E + +G G
Sbjct: 222 LGLPS--QLLTNHRIPQLVSSIPDKVIQVACGGGHTLVLTEESVYAFGLG 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 144/315 (45%), Gaps = 32/315 (10%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F+ + L+CG H+ +T +Y G N++GQLG+ + +P I LK E V+
Sbjct: 32 FKSDTPICLSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVN-KPTCIKALKPEKVK 90
Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
+ G H+ T G +Y G N+ GQLGLG + L FT KQ
Sbjct: 91 FAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDER------DTFHLISFFTSQHKIKQ 144
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G S A+T G++ WG G++G +++ P + G +
Sbjct: 145 LSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVC---------VPHQV--TIGKPIS 193
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGG 297
+ G+ HSA + +G +Y FG+ K+ NH R P L+S +P +V CGG
Sbjct: 194 WISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNH-RIPQLVSSIPDKVIQVACGG 252
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
HT VLT +Y +G + G LG+G+ S +V + +SCG HTA I+
Sbjct: 253 GHTLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMIT 311
Query: 358 E-GKILTWGWGGSHG 371
+ G I T+G G HG
Sbjct: 312 DTGGIYTFG-DGRHG 325
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +R+ P CS F K ++ +ACGG H L V+AT
Sbjct: 319 FGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHML-------VFAT----- 366
Query: 101 GQLGISENIGY 111
Q G++E + +
Sbjct: 367 PQAGMAEELEF 377
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG YG+LGLG + P + + +++++ G +H+ + E G VY G
Sbjct: 4 WGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRG 63
Query: 99 DFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG LEP + ++ ++ G +H+ +T +G +Y WG+N GQLG
Sbjct: 64 WEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGT 123
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P+ L+ A G +VA+ G + SWG G+LGHG +
Sbjct: 124 GDLKSSNSPVLID-SALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTC 182
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P + + AA G H+ + + ++Y +G A ++ +
Sbjct: 183 ---------YFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDK 233
Query: 278 A-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
A +P ++ L S V+CG H+ L ++YTWG N+ G LG+G PE V
Sbjct: 234 AVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELV 293
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKI 361
V Q++CG+ H A ++
Sbjct: 294 TA-LRSVRVQQIACGYDHCVAFVADEV 319
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 27/308 (8%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG + E P + E A+ACG HT+ +T+ G +Y G N G
Sbjct: 60 WGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119
Query: 102 QLGISENIGYSLEPLRI-SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + + S P+ I S L V+ I+ G H+ AI ++G ++ WG+N GQLG G
Sbjct: 120 QLGTGD-LKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGN 178
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K PT+V ++ +AA G + ++ +T K+ +WG+ G+LG + +
Sbjct: 179 --TKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAV- 235
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L G+ HS + +N ++Y +G ++ H+
Sbjct: 236 -------LQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSP 288
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGE----------LYTWGSNENGCLGIGSIDV 327
P L++ L +++ C GY CV E +Y+WG E G LG +
Sbjct: 289 VPELVTALRSVRVQQIAC-GYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLS 347
Query: 328 LHSPERVQ 335
+P V+
Sbjct: 348 RCTPRIVE 355
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVL 199
+Y WGKN GQLGLG +P+PT + LS ++ G S + G V
Sbjct: 1 VYSWGKNKYGQLGLGH--TNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVY 58
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG G G+LGH + I E P ++ ++E A G H+ + +NG +
Sbjct: 59 TWGRGWEGQLGHDVVTEI--------ELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLI 110
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
Y +G+ ++ + + P LI LP + CG +HT + G +++WG N+
Sbjct: 111 YTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
G LG G+ + P +V G ++ + +CG +HT +++ KI WG
Sbjct: 171 CGQLGHGNTKTCYFPTQVVG-MAKKICIRAACGGQHTLVLTDANKIYAWG 219
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 18/282 (6%)
Query: 92 VYATGLNDFGQLGI--SENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMW 147
VY+ G N +GQLG+ + N+ L +S +K V I G HS+ I DG++Y W
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+ GQLG ++ P V + + A G +V VT G + +WG +G
Sbjct: 61 GRGWEGQLG-HDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG G L+S++ +P LI L V A G H+ I G ++ +G
Sbjct: 120 QLGTGD-------LKSSN--SPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170
Query: 267 VDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ P+ + + CGG HT VLT ++Y WGSN G LG+
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNR 230
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
D + S V CG+ H+ A+ + +I TWG
Sbjct: 231 SDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWG 272
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G++G+LGL + P + +ACG +HTL LT +G VY+ G
Sbjct: 4 WGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG LG S + S +VQI+ G +HS A+TV+G+L+ WG+ GQLG G
Sbjct: 64 FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+P V LS Q G + ++A+ G++ SWG G G+ GHG + +IL
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
P+L+ LE + A+AG H+ + G VY +GD ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
G +FGQLG+ + G PL R +E+ V+++ G H+ A+T G++Y +G+ +
Sbjct: 5 GCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G LG G + P+ V+ L G+ Q A G S A+T G++ SWG G G+LG G
Sbjct: 65 GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ L + T+ + RL+ ++ G ++ ID +G+++ +G +
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173
Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
++ P L+ L + G H LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
L WG GQLGL K AA V P+P + + + A G ++A+TG G V S+
Sbjct: 1 LVSWGCGEFGQLGL-KDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGHG S +P ++ L G+ + A G HS + G+++
Sbjct: 60 GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFS 110
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G ++ + +P ++ L +VVCG +T + S G+L++WG G
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQ 170
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G G+ D + P+ V +++ V Q S G +H A+ S G + WG
Sbjct: 171 TGHGTQDNILVPKLVCSLENDNIV-QASAGARHAVALTSGGGVYAWG 216
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
++SWG G G+LG + + + PR ++ + A G H+ + +G
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVF------NSPLPRFLRGSRELLFVRVACGSSHTLALTGSG 54
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY FG + P ++ L ++ CG H+C LT G+L++WG
Sbjct: 55 DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRG 114
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
+ G LG GS++ P V S+ + QV CG +T AI S+G++ +WG HG +
Sbjct: 115 KYGQLGCGSVENHLQPVPVT-ALSDRLLTQVVCGADYTMAIDSDGQLFSWG----HGHWG 169
Query: 375 EDGHSS 380
+ GH +
Sbjct: 170 QTGHGT 175
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 32/344 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ + E+G ++ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
P + L ++ GG+H+ LT+ GE+Y WG E+G LG G D
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V E + QVSCG H+ A++ +G+I ++G G HG
Sbjct: 293 PQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFG-RGDHGRL 334
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 123/291 (42%), Gaps = 10/291 (3%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V A G + GQLG+ + L + + V + G +S AI DG+L+ WG N
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G LG + K P+ V+ L+ + QAA+G +AV G+ +WG G+ G
Sbjct: 67 RGTLGHPPET-KTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G P+ + + V+ AAG HS + G V+ +G +
Sbjct: 126 EPSKDETGRPVRRDIVIPKRCAQQ--LTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDI 183
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
Q P + L + G +H L G L+ WG+NE G LG G P
Sbjct: 184 KQ----ISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP 239
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHSS 380
VQG + VD + GW TA +EG++ WG G HG F ++ SS
Sbjct: 240 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG-RGEHGRLGFGDNDKSS 289
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G ++A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSY-PIPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G +P KV L+G
Sbjct: 246 DDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII 305
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R P+ + +L +A GG H+ LT G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L ++++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFT 179
P +P + G F
Sbjct: 340 VTTGQPLELPIHIPPPEGRFN 360
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 161/374 (43%), Gaps = 54/374 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG S P + +K +ACG A + L E G +Y G N +GQ
Sbjct: 133 WGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQ 192
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + ++ + S + V ++ G H +T ++Y WG NS GQLG G +
Sbjct: 193 LGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKK 252
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P V +SG+ KQ G S +T G + +WG G G+LGHG
Sbjct: 253 HCLQ-PKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDME------- 304
Query: 223 STSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRA-------VDKMLF 272
S+ P L+ L+ + ++ A F+ + +G VY +G VD M +
Sbjct: 305 --SKDIPTLLSPLDPKTQASLIVSGADFI--MAMTYSGAVYSWGRNCFGQLGHGVD-MHY 359
Query: 273 QEGNH----ARRPSLISKLPYSEE--------VVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+ N P +IS SEE + CG +H +T + L+ WG E+G
Sbjct: 360 SKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQ 419
Query: 320 LGIGSIDVLHSP-----ERVQGPFSESPVDQVSCGWKHTAAIS-------EGKILTWGWG 367
LG+ D P ++++G V +C H+ ++ +G + + WG
Sbjct: 420 LGLDPRDTSFRPIPQEVKKMKGMI----VLAAACSENHSVVVATMPGSGPKGDMKVFSWG 475
Query: 368 GSHGTFSEDGHSSG 381
G+F + G+ SG
Sbjct: 476 --RGSFGQLGYGSG 487
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 168/384 (43%), Gaps = 37/384 (9%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAALWGNGD-YGRLGLGSLESRWRPVVCSAFEKHSL 73
KQD+K + I +R + + + G +GR S + RP + S+
Sbjct: 55 KQDLKEALSMNIFQRARTEIAKSKLHLTAGATRIHGRF---STYNSQRPQEVVSLAGLSI 111
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY 132
K + CG H L L +G + + G + GQLG + + +S P I L + V +++ G
Sbjct: 112 KLITCGSDHVLALDASGKIRSWGRGESGQLGHA-SFSHSSTPSIIDELASQRVKEVACGV 170
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
S+A+ G+LY WG N GQLG G + + IP + ++ A G V +
Sbjct: 171 AFSAALMEGGQLYTWGCNRYGQLGQGDRTSSA--IPRMLPSMNHRHVHLMACGAAHIVVL 228
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T V +WG G+LGHG R P+ ++ + G+ +K AG HS
Sbjct: 229 TTSRDVYTWGNNSYGQLGHG--------FRKKHCLQPKSVRVMSGLDIKQIVAGENHSCV 280
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSEE--VVCGGYHTCVLTSGGEL 309
+ G +Y +G ++ + P+L+S L P ++ +V G +T G +
Sbjct: 281 MTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAV 340
Query: 310 YTWGSNENGCLGIGSIDVLHS-----PERVQGP-----FSES------PVDQVSCGWKHT 353
Y+WG N G LG G +D+ +S P V P F+ S + +SCG H
Sbjct: 341 YSWGRNCFGQLGHG-VDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHV 399
Query: 354 AAISEGKILTWGWG-GSHGTFSED 376
AI+E K + WG G HG D
Sbjct: 400 LAITEKKDTLFAWGRGEHGQLGLD 423
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 140/326 (42%), Gaps = 46/326 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G S P + + + +ACG AH + LT + VY G N +GQ
Sbjct: 185 WGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQ 244
Query: 103 LGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + SGL ++ QI G +HS +T G++Y WG+ GQLG G
Sbjct: 245 LGHGFRKKHCLQPKSVRVMSGL--DIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGD 302
Query: 160 KAAKVIPIPTKVECLSGIFTK-QAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+K IP LS + K QA+L G + +A+T G V SWG G+LGHG +
Sbjct: 303 MESKDIPT-----LLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDM 357
Query: 216 SILGFLRSTSEY-TPRLI------KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
R S+ +P++I +E + + + + G H I E R
Sbjct: 358 HYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRG-- 415
Query: 269 KMLFQEGNHARRPSLISKLPYSEEV-----------VCGGYHTCVLTS--------GGEL 309
+ G P S P +EV C H+ V+ + ++
Sbjct: 416 ----EHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKV 471
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQ 335
++WG G LG GS V E VQ
Sbjct: 472 FSWGRGSFGQLGYGSGKVPVMKETVQ 497
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V L+G+ K G + +A+ GK+ SWG G SG+LGH F S+
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHA------SFSHSS--- 150
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP +I EL +VK A G SA + E G++Y +G ++ + + P ++ +
Sbjct: 151 TPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSM 210
Query: 288 PYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
+ + CG H VLT+ ++YTWG+N G LG G H P+ V+ S +
Sbjct: 211 NHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHG-FRKKHCLQPKSVRV-MSGLDI 268
Query: 344 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
Q+ G H+ ++ G I TWG G F + GH
Sbjct: 269 KQIVAGENHSCVMTSFGDIYTWG----RGDFGQLGH 300
>gi|398332633|ref|ZP_10517338.1| RCC1 domain-containing protein [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 527
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 138/299 (46%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 223 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 280
Query: 93 YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL+ +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 281 VAFGQNNVGQLGNGANNLNADSFSMDPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 339
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A IP KVE L GI KQ A G + +A+ G++ SWG S
Sbjct: 340 RNQYGNLGNGRLSAANAAQSIPVKVEGLPGI--KQIANGRDHILALASDGRIYSWGLNAS 397
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L + AG S I ++G V +G
Sbjct: 398 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 449
Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H VL GE+Y WG N G LG
Sbjct: 450 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 508
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 143/316 (45%), Gaps = 29/316 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 152 LSAGGAHSGFL-KNGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 210
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V + A GF
Sbjct: 211 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAV--MGAYGF 268
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G + L + S P + L V IA
Sbjct: 269 NHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMDPVAVVGLRDVIQVIA-- 321
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + N A+ P + LP +++ G H
Sbjct: 322 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEGLPGIKQIANGRDHIL 381
Query: 302 VLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
L S G +Y+WG N +G LGI GS + P +V + S V + G + + +
Sbjct: 382 ALASDGRIYSWGLNASGQLGIGGNGSPNPTPIPTQVLNILNASSV--WAGGTQSFSILKS 439
Query: 359 GKILTWGWGGSHGTFS 374
G++ WG G+ +
Sbjct: 440 GEVKGWGANGNTANLA 455
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 23/265 (8%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 140 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSI 198
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ + P L
Sbjct: 199 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 254
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ ++ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 255 VPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMDPVAVVG 312
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQ 345
L +V+ G H+ LT GE+Y WG N+ G LG G + ++ + + P + Q
Sbjct: 313 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEGLPGIKQ 372
Query: 346 VSCGWKHTAAI-SEGKILTWGWGGS 369
++ G H A+ S+G+I +WG S
Sbjct: 373 IANGRDHILALASDGRIYSWGLNAS 397
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 337 VWGRNQYGNLGNGRLSAANAAQSIPVKVEGLP--GIKQIANGRDHILALASDGRIYSWGL 394
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 395 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 454
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K + GI G + + G G++ WG G LG
Sbjct: 455 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 509
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4003 WGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4062
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4063 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4121 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4178 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4230
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4231 RPRLVAALQGKKVNRVACGSAHT 4253
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2901 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2960
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2961 NGRLGLGISSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3019
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3020 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3071 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3130
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3131 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3186
Query: 386 RGQLT 390
+ Q+
Sbjct: 3187 KPQVV 3191
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2957 GEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3017 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3075
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3076 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3129
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3130 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3184
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3185 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3244
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3245 G-LEGQKITRVACGSSHSVA 3263
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG
Sbjct: 3963 ESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-R 4021
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4022 PRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4079
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4080 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4130
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4131 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4190
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4191 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4249
Query: 350 WKHTAAISEGKILTWG 365
HT A S K + G
Sbjct: 4250 SAHTLAWSTSKPTSAG 4265
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3011 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3071 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3129 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3185
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3186 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3234
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3235 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3266
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3897 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3954
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3955 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4012
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S VT G + +WG G GRLGH
Sbjct: 4013 HGSRSP--CDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4067
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4068 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4181
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4182 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4214
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 28/294 (9%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 435 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 493
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+AIT +GELY WG+ + +L G+ A I I K + F Q++A
Sbjct: 494 SAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYE 553
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V SWG G G+LG G S TP+LI++L+ + V G S +
Sbjct: 554 NGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 604
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
++G+VY +G ++ H R P L+ L + +V G H LT E+++W
Sbjct: 605 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
GSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 665 GSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 707
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L +V+ + +G H
Sbjct: 2939 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRH 2998
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2999 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3056
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3057 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3107
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3108 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3167
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3168 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3225
Query: 370 HG 371
HG
Sbjct: 3226 HG 3227
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ GCVY N +L P + GL
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN-----------SDTLAPQLVQGL 421
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 477
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G RL HG RS
Sbjct: 478 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG---------RSAMNEIL 525
Query: 230 RLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+I L+ K + G F + ENG+V+ +GD K+ + + P LI KL
Sbjct: 526 IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 585
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 586 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 644
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 645 VAAGSTHCLALTEDSEVHSWG 665
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2893 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2950
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVK-----KVAVHSGG-RHATALTV 3004
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3005 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3064
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3065 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3120
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 450 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 508
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG--YHHSSAITVDGELYMWGKNSNGQ 154
++ +L + + + ISGL +++ + S G + + A +G+++ WG G+
Sbjct: 509 GNYXRLDHGRSAMNEIL-IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGK 567
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 568 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 625
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 626 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 123/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
G +Y WG N GQLG G + AKV +P
Sbjct: 3892 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3950
Query: 168 -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3951 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4010
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSAC+ G +Y +G
Sbjct: 4011 LGHGSRSPC---------DRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4061
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4062 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4122 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4176
Query: 384 LDR 386
+ R
Sbjct: 4177 VRR 4179
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 560 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 619
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 620 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4161 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4220
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4221 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4255
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 435 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 494
Query: 354 AAIS-EGKILTWGWGG 368
AAI+ EG++ TWG G
Sbjct: 495 AAITAEGELYTWGRGN 510
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 28/317 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ D+G+LGLG ++ +P + + K +ACG +HTL T G VY G GQ
Sbjct: 59 FGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQ 118
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E+ EP + + + +S GY+H++ +T DG LY +G+ G+LGL
Sbjct: 119 LGLGEDTTECTEPTLLD-FDSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDL 177
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P KV +GI K + G + A+ G V ++G G SG+LGHG
Sbjct: 178 DSSDTPQKV---TGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGN-----SL 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR- 279
L S TP ++ K A+ G +A I G +Y FGD K+ + +
Sbjct: 230 LESP---TPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQ 286
Query: 280 -RPSLISKLPYSEE--VVCGGYHTCVLTS----GGELYTWGSNENGCL----GIGSIDV- 327
RP +++ + V CGG H V+ S GE+ + S+E+ + G S+++
Sbjct: 287 FRPFKVARFNKFQVQWVACGGCHMMVIASPRQQNGEISSESSDEDPLMESISGQKSLNLS 346
Query: 328 -LHSPERVQGPFSESPV 343
+ S + +G S+SP+
Sbjct: 347 KISSENKEEGEDSQSPL 363
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 29/293 (9%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ +ENI +R + ++ G H++ +T +G LY
Sbjct: 8 VPETGAIFT-----FGKSKFAENISSKFW-IR----NDRICAVACGDEHTALVTENGRLY 57
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLGLG K P+ V+ L K A G ++ TG GKV WG G
Sbjct: 58 TFGSNDWGQLGLGH--TKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGS 115
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G++ T+E T + + + + + + G+ H+A + E+G +Y FG+
Sbjct: 116 EGQLGLGED---------TTECTEPTLLDFDSKAISV-SCGYYHTAVVTEDGNLYTFGET 165
Query: 266 AVDKMLFQEG--NHARRPSLISKLPYSEE-VVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
K+ + + P ++ + + VVCGG HT + G +YT+G+ +G LG
Sbjct: 166 EYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGH 225
Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
G S+ +P RV+ F ++ SCG TA I+ +G + T+G G HG
Sbjct: 226 GNSLLESPTPHRVER-FRDADCKHASCGENFTAVITGKGHLYTFG-DGRHGKL 276
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 23/291 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYH 133
A+ACG HT +TE G +Y G ND+GQLG+ S +P + LK E + ++ G
Sbjct: 39 AVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTAS-KPSCVKSLKHEKAKLVACGRS 97
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ T DG++Y+WG S GQLGLG+ + PT ++ S + + G+ + VT
Sbjct: 98 HTLIATGDGKVYVWGGGSEGQLGLGEDTTECTE-PTLLDFDSKAIS--VSCGYYHTAVVT 154
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + ++G G+LG L S TP+ + ++ KVK G H+ I
Sbjct: 155 EDGNLYTFGETEYGKLG-------LNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAI 206
Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
E+G VY FG+ A ++ GN + P + + ++ CG T V+T G
Sbjct: 207 AESGAVYTFGNGASGQL--GHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGH 264
Query: 309 LYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAIS 357
LYT+G +G LG+G + P +V F++ V V+CG H I+
Sbjct: 265 LYTFGDGRHGKLGLGDESFTNQFRPFKV-ARFNKFQVQWVACGGCHMMVIA 314
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG + F+ ++ +++CG HT +TE G +Y G ++G
Sbjct: 110 VWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCGYYHTAVVTEDGNLYTFGETEYG 168
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG++ ++ S P +++G+K++V + G H++AI G +Y +G ++GQLG G
Sbjct: 169 KLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNS 228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P +VE K A+ G + +TG G + ++G G G+LG G ES
Sbjct: 229 LLES-PTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDES----- 282
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
T+++ P + +V+ A G H I
Sbjct: 283 --FTNQFRPFKVARFNKFQVQWVACGGCHMMVI 313
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 31/324 (9%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 38 SKFWFKNDIPAFLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSTVNKPTCVKALK 95
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+K ACG HTL TE G VYA+G N+ GQLG+ + + S + ++++ Q+
Sbjct: 96 PEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL 155
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DGEL+MWG NS GQ+GL K + +P +V G + G+
Sbjct: 156 SAGSNTSAALTEDGELFMWGDNSEGQIGL--KNITNVCVPQQVTV--GKPISWISCGYYH 211
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAG 246
S VT G++ ++G SG+LG ++ + R+ + + G+ K+ A G
Sbjct: 212 SAFVTTEGELYTFGEPESGKLGLPKQLLV----------NHRMPQSVPGIPEKVVQVACG 261
Query: 247 FLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
H+ + E VY FG + LF+ P +I + + + CG H
Sbjct: 262 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE----TPVPKVIEHIKDLKISSIFCGENH 316
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T ++T G +YT+G +G LG+G
Sbjct: 317 TALITDLGLMYTFGDGRHGKLGLG 340
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 21/271 (7%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FG+ +ENI K ++ +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 27 FGKTKFAENIPSKF------WFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG 80
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 81 SKS--TVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERN 138
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 139 SFHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNV 190
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHS-PERVQG 336
P ++ + CG YH+ +T+ GELYT+G E+G LG+ + V H P+ V G
Sbjct: 191 CVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG 250
Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
V QV+CG HT ++E + T+G G
Sbjct: 251 --IPEKVVQVACGGGHTVVLTEKAVYTFGLG 279
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 145/308 (47%), Gaps = 34/308 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ + +P + LK E V+ + G +H
Sbjct: 50 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVN-KPTCVKALKPEKVKFAACGRNH 108
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 109 TLVSTEGGKVYASGGNNEGQLGLGDTDER------NSFHLISFFTSQRKIKQLSAGSNTS 162
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G +++ P+ + G + + G+ H
Sbjct: 163 AALTEDGELFMWGDNSEGQIGLKNITNVC---------VPQQV--TVGKPISWISCGYYH 211
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
SA + G +Y FG+ K+ + NH R P + +P +V CGG HT VLT
Sbjct: 212 SAFVTTEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACGGGHTVVLTE 270
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSP-ERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
+YT+G + G LG+G+ + +P +V + + + CG HTA I++ G + T
Sbjct: 271 KA-VYTFGLGQFGQLGLGTF-LFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYT 328
Query: 364 WGWGGSHG 371
+G G HG
Sbjct: 329 FG-DGRHG 335
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2958 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3017
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3018 NGRLGLGLSSG-TIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3076
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3077 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGS 3187
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3188 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3243
Query: 386 RGQLT 390
+ Q+
Sbjct: 3244 KPQMV 3248
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 3014 GEATNGRLGLG-LSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGD 3072
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3073 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3131
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3132 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGG--- 3186
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3187 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3240
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3241 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3300
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILT 363
QG + +V+CG H+ A + + T
Sbjct: 3301 QG-LEGQKITRVACGSSHSVAWTTVDVTT 3328
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 18/291 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG N P I L+ EVV I+ G
Sbjct: 4042 AVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 4100
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GEL+ WGK G+LG G ++ P V+ L G + G Q++
Sbjct: 4101 HSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDALQGHRVIDVACGSGDAQTLC 4158
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L G+ V G S
Sbjct: 4159 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4269
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
YTWG N+ G LG G+ + + P R+ +++V+CG HT A S K
Sbjct: 4270 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 4319
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4062 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4121
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4122 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4180 -GSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4236
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4237 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4289
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4290 RPRLVAALQGKKINRVACGSAHT 4312
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 141/319 (44%), Gaps = 34/319 (10%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + LA G H L L+ G V++ G D G+LG + Y EP I
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPKMIG 533
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV ++ G +S+AIT DGELY WG+ + G+LG G + P+ V
Sbjct: 534 TFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPM--VVTAF 591
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 592 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 642
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
++L+ + + G S + ++G+VY +G ++ H R P L+ L +
Sbjct: 643 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKV 702
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+V G H LT GE+ +WGSN+ + D L S ++ P
Sbjct: 703 VDVAVGSTHCLALTDDGEVLSWGSNDK----LQHFDTLFSNKK-------QPKALPGLNS 751
Query: 351 KHTAAISEGKILTWGWGGS 369
KH IS G ++ W S
Sbjct: 752 KHIVGISCGPGQSFAWSSS 770
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 28/312 (8%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 3032 IPRQITALSNYVIK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDK 3086
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+LG +N L L
Sbjct: 3087 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL 3146
Query: 122 KKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
V+Q++ G + A+T +G ++ WG G+LG G ++ +P +E L+G
Sbjct: 3147 GHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG--GSEGCNVPQNIERLNGQGV 3204
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q G + S+A+T G V +WG G RLGHG + + P++++ L G K
Sbjct: 3205 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQMVEGLRGKK 3255
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EV 293
+ A G LH + + G+VY +GD Q+GN R+P+L+ L + V
Sbjct: 3256 IVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITRV 3311
Query: 294 VCGGYHTCVLTS 305
CG H+ T+
Sbjct: 3312 ACGSSHSVAWTT 3323
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 159/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +E V S +L+ + GG TLF +T G +YATG
Sbjct: 3956 WGHNHRGQLG--GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4013
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4014 GRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4071
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S +T G++ +WG G GRLGHG
Sbjct: 4072 HGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD--- 4126
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L+ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4127 ------SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4181 SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4240
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4241 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4273
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +I+ L V++ + +G H
Sbjct: 2996 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRH 3055
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3056 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3113
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 3114 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3164
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3165 LTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3224
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3225 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3282
Query: 370 HG 371
HG
Sbjct: 3283 HG 3284
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 149/319 (46%), Gaps = 41/319 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + + C L L+ +G VY+ +L P+ I L
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYK-----------STTLAPMLIHVL 481
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G + P + +G
Sbjct: 482 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPKMIGTFNG-- 537
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + TP +
Sbjct: 538 -KQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTTPMV 587
Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ +G+KV A +G + + ENG+V+ +GD K+ + + P L+ KL
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 647
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+ +V CG + LT G++YTWG +N LG G+ + + P+ + + VD V+
Sbjct: 648 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD-VA 706
Query: 348 CGWKHTAAIS-EGKILTWG 365
G H A++ +G++L+WG
Sbjct: 707 VGSTHCLALTDDGEVLSWG 725
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P+V +AF+ + +ACG A TL +TE G V++ G D+
Sbjct: 566 WGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 625
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 626 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 685
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+VLSWG+ + +L H
Sbjct: 686 --EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGS--NDKLQH 732
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2950 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3007
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G S + R + + +IK KV + + G H+ +
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIK-----KVAVHSGG-RHAMALTV 3061
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+WG
Sbjct: 3062 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3121
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3122 LGEYGRLGHGDNTTQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGFVFSWGDG 3177
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + F KH + +ACG ++ +T G +Y G
Sbjct: 510 WGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVH-VACGSTYSAAITADGELYTWGR 568
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + GLK V +G + A+T +G+++ WG G+L
Sbjct: 569 GNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 628
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 629 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 686
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L+ L+G KV A G H + ++G V +G
Sbjct: 687 HV---------RYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWG 725
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 123/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3951 GTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATG 4009
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 4070 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4120
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4121 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4181 SDGCKIPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4235
Query: 384 LDR 386
+ R
Sbjct: 4236 VRR 4238
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 679
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + L+ K+VV ++ G H A+T DGE+ WG N Q L
Sbjct: 680 LGHGTDEHVRY---PKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTL 736
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 737 FSNKKQPKALP 747
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4220 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4279
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4280 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4314
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H + TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 114 QGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL G A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L GV + A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 223 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQIM 280
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 281 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 21/260 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + IT + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + V T G+V +WG G +LG+G + + ++ T
Sbjct: 70 ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 124
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
LIK KV A G HS + +G +Y +G ++ + P +S
Sbjct: 125 LLIK-----KVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ 179
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+ VV CG + + S GE+Y WG N NG LG+G+ +P RV + Q+
Sbjct: 180 GKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQLTPCRV-AALHGVCILQI 238
Query: 347 SCGWKHTAAIS-EGKILTWG 365
+CG+ HT A++ EG + WG
Sbjct: 239 ACGYAHTLALTDEGLLYAWG 258
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LG-TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFACTDDVF 333
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 91/217 (41%), Gaps = 36/217 (16%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ +T +V +G S LG G S + P+ ++ L G K+ + G
Sbjct: 32 NEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI---------VPKKLEALCGKKISSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYH 299
H E+G VY +G ++ N P LI K+ EV CG +H
Sbjct: 83 SGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVV---EVACGSHH 139
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
+ L+ G+LY WG N G +G GS +P RV V ++CG + A +S
Sbjct: 140 SMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSN 199
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
G++ WG+ G+ GQL G QLTP
Sbjct: 200 GEVYGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
echinatior]
Length = 771
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 155/330 (46%), Gaps = 33/330 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +P + + +ACG AHTL T ++A G N G
Sbjct: 105 IFGSNDWGQLGLGHRNHISKPSCVKILKPERVTHVACGRAHTLICTGAQKIFACGSNQEG 164
Query: 102 QLGISENI--GYSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLG ++ S P+ I GL ++Q++ G HHS A+T DG + WG N GQLG
Sbjct: 165 QLGRENSVIGDSSSSPILIYDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLG 224
Query: 157 LGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
L + + V +PIP V K+ + G+ SV +T G + G SG+LG
Sbjct: 225 LPEISGLVYKPMKVPIPEPV--------KEISAGYYHSVFLTESGLIYICGESESGKLGL 276
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
+ F +++ P+ + +L + +A G H+ + ENG +Y G A ++
Sbjct: 277 N-----INF---STQVAPKQM-QLPAPALHVACGGH-HTFILAENGNIYCSGSNASGQLG 326
Query: 271 LFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ N P L+ + +E +VCG H+ +LT G+L+T G +G LG+ +
Sbjct: 327 MGINVNETPTPKLLPRGALQDEKIIKIVCGESHSAILTESGKLFTCGDGRHGKLGLEENE 386
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ E V V+CG HT +
Sbjct: 387 NNVHEVTFAVKYQELFVSNVACGGCHTILV 416
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 160/330 (48%), Gaps = 30/330 (9%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ + S F K + + CG H+ + +TG ++ G ND+GQLG+ S +P
Sbjct: 67 SRFADNIASHFFIRKDPVVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHIS-KP 125
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPT 169
+ LK E V ++ G H+ T +++ G N GQLG +G ++ I I
Sbjct: 126 SCVKILKPERVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSSPILI-- 183
Query: 170 KVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+C L+G Q A G S+A+T G V++WG+ G+LG + S ++ Y
Sbjct: 184 -YDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLV--------YK 234
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P + E VK +AG+ HS + E+G +YI G+ K+ + +LP
Sbjct: 235 PMKVPIPEPVKE--ISAGYYHSVFLTESGLIYICGESESGKLGLNINFSTQVAPKQMQLP 292
Query: 289 YSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER---VQGPFSESPVD 344
V CGG+HT +L G +Y GSN +G LG+G I+V +P +G + +
Sbjct: 293 APALHVACGGHHTFILAENGNIYCSGSNASGQLGMG-INVNETPTPKLLPRGALQDEKII 351
Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
++ CG H+A ++E GK+ T G G HG
Sbjct: 352 KIVCGESHSAILTESGKLFTCG-DGRHGKL 380
>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 964
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 141/308 (45%), Gaps = 31/308 (10%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK- 123
A +++ +ACG HT +T +G +Y G FG LG ++ + + P ++G +
Sbjct: 231 ALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWV-PKHVNGPLEG 289
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V IS G H++ +T G+L+ +G S G LG G + + I +P +VE L G+ T +A
Sbjct: 290 IHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRTVRA 347
Query: 183 ALGFEQSVAVT------------GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
A G + AV GK+ +WG G GRLGHG + L P
Sbjct: 348 ACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKL---------VPT 398
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--P 288
+ L A G + + +G VY G ++ + + + KL
Sbjct: 399 CVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKN 458
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+ EE+ CG YH VLTS E+YTWG NG LG G + ++P V+ + V V C
Sbjct: 459 FVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEA-LKDKQVRNVVC 517
Query: 349 GWKHTAAI 356
G TAAI
Sbjct: 518 GINFTAAI 525
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 32/261 (12%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
++ G +H+ A+T+ G+LY WG + G LG G + +P L GI + G
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCG 298
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG SI PR ++ L+G++ AA
Sbjct: 299 PWHTALVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAAC 349
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ + P+ ++ L P
Sbjct: 350 GVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDG--DKGRLGHGDKEPKLVPTCVAALVEPN 407
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+V CG T LT+ G +YT GS G LG D + P RV+G ++ V+++SCG
Sbjct: 408 FCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGM-LPVRVEGKLYKNFVEEISCG 466
Query: 350 WKHTAAI-SEGKILTWGWGGS 369
H A + S ++ TWG G +
Sbjct: 467 AYHVAVLTSRTEVYTWGKGAN 487
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E + P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 378 WGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 437
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 438 LGNAQADG--MLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 495
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 496 EDKN--TPTLVEALKDKQVRNVVCGINFTAAI 525
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 275 GNHA----RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSID 326
G HA ++ LI L + E V CG YHTC +T G+LYTWG + G LG G+ D
Sbjct: 216 GRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-D 274
Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
V H P+ V GP V +SCG HTA + S G++ T+G G
Sbjct: 275 VSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDG 317
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS-- 285
+LI L + +++ A G H+ + +G +Y +GD L GN P ++
Sbjct: 227 KLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP 286
Query: 286 -KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+ + + CG +HT ++TS G+L+T+G G LG G + + P V+ V
Sbjct: 287 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTV- 345
Query: 345 QVSCGWKHTAAISE-------------GKILTWGWG 367
+ +CG HTAA+ E GKI TWG G
Sbjct: 346 RAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDG 381
>gi|72391922|ref|XP_846255.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359875|gb|AAX80302.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802791|gb|AAZ12696.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 639
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 165/362 (45%), Gaps = 39/362 (10%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCV 92
++R+ WG+G G LG E P V + F H + +A G +++ L G V
Sbjct: 152 MRRQLLFSWGSGSCGELGTQRFEDCNTPTFVQITPFGVHVVD-VALGASYSCVLASDGNV 210
Query: 93 YATGLNDFGQLGI----------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVD 141
Y G D+GQLG+ + P RIS ++E V ++ GY + A+T D
Sbjct: 211 YTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAVHVAAGYAFAVALTAD 270
Query: 142 GELYMWGKNSNGQLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+Y WG N++GQ GLG ++ + + PT V L G +Q + G ++A+ G
Sbjct: 271 HHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGKHIEQLSCGSFFTLALGTDGT 330
Query: 198 VLSWGAGGSGRLGHGQES---------SILGFLRSTSEYT----PRLIKELEGVKVKIAA 244
+ SWG LG G E+ SI+G S E T P++++ K+
Sbjct: 331 LYSWGLLDC--LGLGSEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPTEHKLVRIH 388
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-LISKLP--YSEEVVCGGYHTC 301
AG HS I+ G ++ +G ++ + RP ++ L + +V CG +HT
Sbjct: 389 AGQWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTV 448
Query: 302 VLTSGGELYTWGSNENG-CLGIGSIDVLHSPERVQG-PFSESPVDQ-VSCGWKHTAAISE 358
LT G +Y WG N +G C + D + SP RV F V + ++CG +HT + E
Sbjct: 449 ALTDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVNLEFVAGGVARAIACGRQHTVVVME 508
Query: 359 GK 360
G
Sbjct: 509 GP 510
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 35/282 (12%)
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIP 166
++I+ VV ++ G +S + DG +Y +G GQLGLG + V+
Sbjct: 182 VQITPFGVHVVDVALGASYSCVLASDGNVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVT 241
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ A G+ +VA+T V WG G+ G G S LR E
Sbjct: 242 VPQRISMFEREPAVHVAAGYAFAVALTADHHVYFWGNNNHGQSGLGPRSFHCS-LRKVEE 300
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------DRA-------V 267
P L+ LEG ++ + G + + +G +Y +G RA +
Sbjct: 301 --PTLVTTLEGKHIEQLSCGSFFTLALGTDGTLYSWGLLDCLGLGSEAEVRASVTDISII 358
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
K L E + ++P ++V G +H+ + + GEL+TWG G LG G
Sbjct: 359 GKSLSAEERTVVLEPQVVRVPTEHKLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGHGD 418
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P++V G + V V+CG HT A+++ G + WG
Sbjct: 419 NGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAVYCWG 460
>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 159/349 (45%), Gaps = 57/349 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN-DFG 101
WG G G+LG G E R P + L+ HTL L +G N D G
Sbjct: 64 WGRGSSGQLGGGIEEIRLYP--------SPVANLSVPNIHTLALAPGQLPSFSGDNQDSG 115
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G E + IS G HSS + V+G++++WGK G+LG G +
Sbjct: 116 DDGSFE------------------LGISCGLFHSS-LLVNGKVWIWGKGDGGRLGFGHEN 156
Query: 162 AKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P + +++E + I ALG SVA+ G+V +WG GG G LGH
Sbjct: 157 PVFVPTLNSRLESVRCI-----ALGGLHSVALNALGQVFTWGYGGFGALGHSVYHR---- 207
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------Q 273
E PRL++ ++K A H+A I E+G VY +G D L
Sbjct: 208 -----ELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPN 262
Query: 274 EGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
EG P + LP V CGG+ T L G+L+ WG+N N LG G+ P+
Sbjct: 263 EGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPK 322
Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
V ++P+ Q+ CG H+ A++ +GK+L+WG+GG HG GHSS
Sbjct: 323 PVPS-LEDTPIIQIVCGGYHSLALTGDGKVLSWGYGG-HGQL---GHSS 366
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 126/271 (46%), Gaps = 20/271 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG G +G LG P + + +K +A GAHT +TE+G VY G ++
Sbjct: 192 WGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWGRDEGDG 251
Query: 100 ----FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G +E G S+ P R+ L V +S G + A+ VDG+L+ WG N+N +L
Sbjct: 252 RLGLGPGRGPNEGGGLSI-PCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFEL 310
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G P P V L Q G S+A+TG GKVLSWG GG G+LGH S
Sbjct: 311 GRGNNIGGWEPKP--VPSLEDTPIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGH---S 365
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
SI +E PR+I L +V A SA + G++Y++G+ A D L G
Sbjct: 366 SI------QNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWGN-AKDSQLGVPG 418
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
+ S + + +E+ G YH + G
Sbjct: 419 LPEVQTSPVEVIFLTEDDGLGPYHVLSVAVG 449
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 23/322 (7%)
Query: 23 KLGI-CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA 81
+LGI C + SS L +WG GD GRLG G + P + S E S++ +A GG
Sbjct: 121 ELGISCGLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGL 178
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITV 140
H++ L G V+ G FG LG S L P + G + + I+T H++AIT
Sbjct: 179 HSVALNALGQVFTWGYGGFGALGHSV-YHRELVPRLVEGSWRGRIKHIATSGAHTAAITE 237
Query: 141 DGELYMWGKNSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
GE+Y WG++ + IP +V L + GF ++A+
Sbjct: 238 SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGF-FTMALGVD 296
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ +WGA + LG G + + P+ + LE + G HS +
Sbjct: 297 GKLWNWGANTNFELGRGN---------NIGGWEPKPVPSLEDTPIIQIVCGGYHSLALTG 347
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V +G ++ + + P +I L + C G + +T+ G+LY WG
Sbjct: 348 DGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWG 407
Query: 314 SNENGCLGI-GSIDVLHSPERV 334
+ ++ LG+ G +V SP V
Sbjct: 408 NAKDSQLGVPGLPEVQTSPVEV 429
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+L WG+ S+GQLG G + ++ P P + I T A G S + G G
Sbjct: 60 QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHTLALAPGQLPSFS----GDNQDSG 115
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GS LG + G HS+ + NG+V+I+
Sbjct: 116 DDGSFELG--------------------------------ISCGLFHSSLL-VNGKVWIW 142
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
G ++ F N P+L S+L + GG H+ L + G+++TWG G LG
Sbjct: 143 GKGDGGRLGFGHENPVFVPTLNSRLESVRCIALGGLHSVALNALGQVFTWGYGGFGALGH 202
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
P V+G + + ++ HTAAI+E G++ TWG
Sbjct: 203 SVYHRELVPRLVEGSW-RGRIKHIATSGAHTAAITESGEVYTWG 245
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + +V CG YHT + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
A G H+L L V + G N GQLG G EP++ + L ++V S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
+T+G N +G LG P+ V+ + V QV CG HT A + G+++++G G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHG 315
Query: 368 GS 369
S
Sbjct: 316 PS 317
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGAEHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G E + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ ++ + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG + ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + +V CG YHT + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
A G H+L L V + G N GQLG G EP++ + L ++V S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
+T+G N +G LG P+ V+ + V QV CG HT A + G+++++G G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHG 315
Query: 368 GS 369
S
Sbjct: 316 PS 317
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGAEHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G E + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ ++ + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG + ++ +P+++ + + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT-LNGIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHG 371
A+S + ++ +WG SHG
Sbjct: 141 LALSKDSQVFSWG-KNSHG 158
>gi|302847903|ref|XP_002955485.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
gi|300259327|gb|EFJ43556.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
Length = 1660
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 38 RFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R A +G GRLGLG L+S++ P + ++ +S+K +ACGGAHT +T+ G ++ G
Sbjct: 7 RVLATFGTAADGRLGLGFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFG 66
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LN +GQLG S + PL + GL VV ++ G +H+ A+T GE++ WG GQLG
Sbjct: 67 LNSWGQLGHSRQDKFVASPLEV-GLPDPVVAVAAGGYHTLALTSAGEVWCWGMAGEGQLG 125
Query: 157 LGKKAAKVI----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+G+ + P V LSG A G S+A+T G++ SWG G G LGHG
Sbjct: 126 IGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRGDQGALGHG 185
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G GRLG LGF S++ PR++ L G +K A G H+A + ++G +
Sbjct: 11 TFGTAADGRLG-------LGFPLK-SQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGAL 62
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISK-----LPYSE-EVVCGGYHTCVLTSGGELYTWG 313
+ FG + ++ H+R+ ++ LP V GGYHT LTS GE++ WG
Sbjct: 63 FTFGLNSWGQL-----GHSRQDKFVASPLEVGLPDPVVAVAAGGYHTLALTSAGEVWCWG 117
Query: 314 SNENGCLGIGSIDV-----LHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
G LGIG R+ G S + V ++ G H+ A++ G++ +WG G
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG 177
Query: 368 GS----HGT--FSEDGHSSGGQLDRG 387
HGT + +SSG RG
Sbjct: 178 DQGALGHGTVAITAGPYSSGAVDSRG 203
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +G ++G+LGLG P V L+G KQ A G + VT G + ++G
Sbjct: 9 LATFGTAADGRLGLGFPLKSQF-YPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFGL 67
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH ++ F+ S E L V +AA G+ H+ + G V+ +G
Sbjct: 68 NSWGQLGHSRQDK---FVASPLEVG------LPDPVVAVAAGGY-HTLALTSAGEVWCWG 117
Query: 264 DRAVDKMLFQE------GNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
++ E G P L+ L + V G +H+ LT GEL++WG
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG 177
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
+ G LG G++ + GP+S VD S G WG+G
Sbjct: 178 DQGALGHGTVAI------TAGPYSSGAVD------------SRGNAYVWGYG 211
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG+ + P ++ L + Q++ G H++ +T DG L+ +G NS GQLG +
Sbjct: 18 GRLGLGFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFGLNSWGQLGHSR 77
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ K + P +V + A G ++A+T G+V WG G G+LG G+ S
Sbjct: 78 QD-KFVASPLEVGLPDPVVA--VAAGGYHTLALTSAGEVWCWGMAGEGQLGIGEPSEGAT 134
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R + PRL+ L G V AAG HS + +G ++ +G D+ G A
Sbjct: 135 GGR---QVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG--DQGALGHGTVA- 188
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G Y + + S G Y WG LG G
Sbjct: 189 -------------ITAGPYSSGAVDSRGNAYVWGYGTGYQLGTG 219
>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
coralloides DSM 2259]
gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
2259]
Length = 827
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 162/331 (48%), Gaps = 30/331 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + G+LG G++E R PV + + LA G H+L + G V A G N +GQ
Sbjct: 249 WGDNESGQLGDGTMEGRLTPV--QVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQ 306
Query: 103 LGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG + G+SLE P+ +S L +VV ++ S A+ DG + WG N +G LG+
Sbjct: 307 LG---DGGFSLEGNPRPVAVSKL-TDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVE 362
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+++ +P+KV L+ + T ++G +VA+ G G V SWG SG+LG G
Sbjct: 363 QRSNSR--VPSKVFGLTDVAT--VSVGGYYAVALMGDGTVRSWGNNDSGQLGDGT----- 413
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNH 277
++R +TP + L GV +AG H + +G ++GD ++ E +
Sbjct: 414 -YIR----HTPTPVPGLTGVTA--VSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVN 466
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + L + V G H+ L + G ++ WG N LG+G + SP VQ P
Sbjct: 467 RGGPVQVPGLTEASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGD-EPGASPTPVQVP 525
Query: 338 FSESPVDQVSCGWKHT-AAISEGKILTWGWG 367
+ V ++ G + A ++ G ++ WG+G
Sbjct: 526 -KLAGVRSLAAGENSSLAVLANGTVMAWGYG 555
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 154/346 (44%), Gaps = 26/346 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D G+LG G+ R P + A++ G H + + G G N F Q
Sbjct: 401 WGNNDSGQLGDGTY-IRHTPTPVPGLT--GVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQ 457
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+++ GL E ++ G HS A+ DG ++ WG NS LGLG +
Sbjct: 458 LGRPPESVNRGGPVQVPGLT-EASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPG 516
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P +V L+G+ + A G S+AV G V++WG G G+LG + +SI
Sbjct: 517 AS-PTPVQVPKLAGV--RSLAAGENSSLAVLANGTVMAWGYGLFGQLGS-ESASIF---- 568
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L G+ A G +S + E+G V+ +G A ++ + RP
Sbjct: 569 ----QIPEPIFGLSGITA--VAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPG 622
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++ L + G H L + G ++ WGSN G LG G+ +P +VQG +
Sbjct: 623 QVAGLTQVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRSTPVQVQG---LTG 679
Query: 343 VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQL 384
V V+ G H+ A+ E + W WG G G + S GQ+
Sbjct: 680 VIAVAAGEYHSLALREDGTV-WSWGNNNEGQLGDVTASSRQSPGQV 724
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 140/294 (47%), Gaps = 20/294 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++A++ G H L L G V+A G N GQLG S P+++ GL EV+ +S
Sbjct: 177 VRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRS-TPVQVVGLT-EVIAVSAAG 234
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ S A+ DG ++ WG N +GQLG G ++ P V+ L + A G S+AV
Sbjct: 235 YSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTP----VQVLDLVRVTGLAAGRGHSLAV 290
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V +WGA G+LG G GF + E PR + + V AA S
Sbjct: 291 LADGTVRAWGANIYGQLGDG------GF---SLEGNPRPVAVSKLTDVVSVAASTSLSFA 341
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G V +G + ++ +++R PS + L V GGY+ L G + +W
Sbjct: 342 VHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVFGLTDVATVSVGGYYAVALMGDGTVRSW 401
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G+N++G LG G+ + H+P V G + V VS G H A+ S+G WG
Sbjct: 402 GNNDSGQLGDGTY-IRHTPTPVPG---LTGVTAVSAGEDHVVAVLSDGSPRVWG 451
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 40/333 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + LGLG E P + +++LA G +L + G V A G FGQ
Sbjct: 501 WGDNSFSALGLGD-EPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQ 559
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SE+ P I GL + ++ G+ +S A+ DG ++ WG N++GQLG G
Sbjct: 560 LG-SESASIFQIPEPIFGLSG-ITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDE 617
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V L+ + A G ++A+ G V +WG+ G LG G +
Sbjct: 618 R--PRPGQVAGLTQV--TAIAAGASHALALRADGTVWAWGSNALGTLGDGTQ-------- 665
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS TP ++ L GV AAG HS + E+G V+ +G+ ++ + + P
Sbjct: 666 -TSRSTPVQVQGLTGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPG 722
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI---------GSIDVLHSPER 333
+ L + + G H GG L +G N +G LG+ G I L +P
Sbjct: 723 QVPGLAGVQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIASLRNPR- 781
Query: 334 VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
++ G HT A+ ++G + WG
Sbjct: 782 -----------GIAAGIAHTLAVAADGTVWAWG 803
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 21/292 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG S P F + A+A G ++L L E G V++ G N GQ
Sbjct: 552 WGYGLFGQLGSESASIFQIPEPI--FGLSGITAVAMGHWYSLALREDGTVWSWGYNASGQ 609
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P +++GL +V I+ G H+ A+ DG ++ WG N+ G LG G + +
Sbjct: 610 LG-DGTTDERPRPGQVAGLT-QVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQTS 667
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A G S+A+ G V SWG G+LG +
Sbjct: 668 RSTPV--QVQGLTGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLGD---------VT 714
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++S +P + L GV+ +IAA G H+ E G + FG ++ E +
Sbjct: 715 ASSRQSPGQVPGLAGVQ-RIAA-GEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRG 772
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
I+ L + G HT + + G ++ WG+N G LG G + +SP+ +
Sbjct: 773 EIASLRNPRGIAAGIAHTLAVAADGTVWAWGANATGQLGNG--EAANSPQPI 822
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 134/297 (45%), Gaps = 35/297 (11%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A+A G H+L + G V GL+ + P + GL +V +S G
Sbjct: 136 PAVAAGRYHSLMVRPDGTVLEWGLSYL-------RFDGGVRP--VPGLT-DVRAVSAGNE 185
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A+ DG ++ WG N GQLG G K ++ P+ +V L+ + AA G+ S+A+
Sbjct: 186 HALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPV--QVVGLTEVIAVSAA-GYS-SLALR 241
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V +WG SG+LG G L TP ++ L+ V+V AAG HS +
Sbjct: 242 KDGTVWAWGDNESGQLGDGTMEGRL---------TP--VQVLDLVRVTGLAAGRGHSLAV 290
Query: 254 DENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+G V +G ++ EGN RP +SKL V + + S G +
Sbjct: 291 LADGTVRAWGANIYGQLGDGGFSLEGNP--RPVAVSKLTDVVSVAASTSLSFAVHSDGTV 348
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC-GWKHTAAISEGKILTWG 365
+WGSN +G LG+ P +V F + V VS G+ A + +G + +WG
Sbjct: 349 SSWGSNVDGALGVEQRSNSRVPSKV---FGLTDVATVSVGGYYAVALMGDGTVRSWG 402
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN + G+LG + SR P ++ +A G H L E G + A G N GQ
Sbjct: 702 WGNNNEGQLGDVTASSRQSPGQVPGLA--GVQRIAAGEKHALAAVEGGPLVAFGKNTSGQ 759
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E + I+ L+ I+ G H+ A+ DG ++ WG N+ GQLG G+ A
Sbjct: 760 LGLGERK-ENQSRGEIASLRNPR-GIAAGIAHTLAVAADGTVWAWGANATGQLGNGEAAN 817
Query: 163 KVIPIPTKV 171
PI K+
Sbjct: 818 SPQPITVKL 826
>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 1419
Score = 113 bits (282), Expect = 2e-22, Method: Composition-based stats.
Identities = 103/336 (30%), Positives = 159/336 (47%), Gaps = 26/336 (7%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
+ WG+ YG+LG G+ R PV K ++A GG H+L L + V A G N
Sbjct: 521 YVMAWGSNTYGQLGDGTNIQRSTPVRVQGL-KGQASSVAAGGTHSLALLQDKSVAAWGNN 579
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
D GQLG + ++GL ++V I+ G HS A+ DG ++ WG NS+GQLG G
Sbjct: 580 DHGQLGDGSFTNRNTAA-TVNGLS-DIVGIAAGERHSLAVQSDGSVWAWGDNSSGQLGDG 637
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+ KV+ LS + TK AA G + S+A+T GKV +WG G+LG G
Sbjct: 638 TLKERSTPV--KVKGLSQV-TKIAA-GGDTSLAITADGKVWAWGNNQDGQLGDGT----- 688
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-- 276
+ ++ TP L+ L V + G+ H + +G V+ +GD + + + G+
Sbjct: 689 ----TNNQSTPVLVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNS--QSILGTGSAD 740
Query: 277 -HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERV 334
+ P+ + L + G + +T+ G WG N+ LG GS S P ++
Sbjct: 741 AYCAVPTQVKGLSGVTAISAGNQFSLAMTNQGVAEAWGRNDFNQLGDGSAAKFESTPVQI 800
Query: 335 QGPFSESPVDQ-VSCGWKHTAAISEGKILTWGWGGS 369
+ VDQ +S G H + G +WG+ S
Sbjct: 801 KNMPLVPVVDQSISAGGYHALCGTLGT-RSWGYNAS 835
Score = 106 bits (264), Expect = 2e-20, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 141/310 (45%), Gaps = 29/310 (9%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
LQ + A WGN D+G+LG GS +R + + +A G H+L + G V+A
Sbjct: 568 LQDKSVAAWGNNDHGQLGDGSFTNRNTAATVNGLS--DIVGIAAGERHSLAVQSDGSVWA 625
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL +V +I+ G S AIT DG+++ WG N +GQ
Sbjct: 626 WGDNSSGQLG-DGTLKERSTPVKVKGL-SQVTKIAAGGDTSLAITADGKVWAWGNNQDGQ 683
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P+ V LS + T ++G+ +A+ G V +WG LG G
Sbjct: 684 LGDGTTNNQSTPV--LVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNSQSILGTGSA 739
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ P +K L GV +AG S + G +G +++ +
Sbjct: 740 DAYCA--------VPTQVKGLSGVTA--ISAGNQFSLAMTNQGVAEAWGRNDFNQL--GD 787
Query: 275 GNHAR---RPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
G+ A+ P I +P + + GGYH T G +WG N +G LG+G +
Sbjct: 788 GSAAKFESTPVQIKNMPLVPVVDQSISAGGYHALCGTLGTR--SWGYNASGQLGLGITEH 845
Query: 328 LHSPERVQGP 337
+ PE + P
Sbjct: 846 ISIPEAISSP 855
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 28/259 (10%)
Query: 128 ISTGYHHSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+S G HS + GE M WG N+ GQLG G + P+ +V+ L G + AA G
Sbjct: 508 VSAGDSHSLSA---GEYVMAWGSNTYGQLGDGTNIQRSTPV--RVQGLKGQASSVAA-GG 561
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ V +WG G+LG G F + T + ++ G+ AAG
Sbjct: 562 THSLALLQDKSVAAWGNNDHGQLGDGS------FTNRNTAATVNGLSDIVGI-----AAG 610
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
HS + +G V+ +GD + ++ P + L ++ GG + +T+
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKGLSQVTKIAAGGDTSLAITAD 670
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G+++ WG+N++G LG G+ + +P V G S V VS GW H A+ S+G + W
Sbjct: 671 GKVWAWGNNQDGQLGDGTTNNQSTPVLVPG---LSDVTTVSVGWTHCLALKSDGGV--WA 725
Query: 366 WGGSH----GTFSEDGHSS 380
WG + GT S D + +
Sbjct: 726 WGDNSQSILGTGSADAYCA 744
Score = 82.8 bits (203), Expect = 3e-13, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 126/286 (44%), Gaps = 28/286 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG GS +R P + + A+A G ++ L L G V+A G N G
Sbjct: 122 WGSNQYGELGDGSTTNRNSPAPVPSLS--GISAIATGYSYCLALKNDGTVWAWGSNQNGA 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P++ISGL VV I+ YH S AI DG ++ WG N GQLG G
Sbjct: 180 LGDGTTDDRK-TPVQISGLSG-VVSIAANYHSSYAIKSDGTVWAWGLNDQGQLGDGLSKD 237
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +PI T + + + GF +V G W G S+ G +
Sbjct: 238 QWLPINTGLSNIKSLIPG----GFSLTVIKQDGS---LWQLG----------LSVNGSVS 280
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RP 281
+ EYT + L V AAAG + I ++ V+ +G+ + N +P
Sbjct: 281 NDVEYTLVQVPGLS--HVVSAAAGQNNFMAILQDQTVWTWGNALPG---YGSMNTVTPQP 335
Query: 282 SLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ L + V C G++ L + G ++ WG+N NG LG G+ D
Sbjct: 336 VQVQGLSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDGTKD 381
Score = 76.3 bits (186), Expect = 3e-11, Method: Composition-based stats.
Identities = 89/349 (25%), Positives = 142/349 (40%), Gaps = 43/349 (12%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG G G LG +S V A + A++ GG L L G V++ G N
Sbjct: 68 GTVWGWGT-GPLGNNDADSNSALVPVQAKNLTDVIAISAGGDVALALKNDGTVWSWGSNQ 126
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG + P + L + I+TGY + A+ DG ++ WG N NG LG G
Sbjct: 127 YGELGDGSTTNRN-SPAPVPSLSG-ISAIATGYSYCLALKNDGTVWAWGSNQNGALGDGT 184
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ ++ LSG+ + A + S A+ G V +WG G+LG G
Sbjct: 185 TDDRKTPV--QISGLSGVVS--IAANYHSSYAIKSDGTVWAWGLNDQGQLGDGL------ 234
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------DRAVDKMLF 272
S ++ P + L +K I G I ++G ++ G V+ L
Sbjct: 235 ---SKDQWLP-INTGLSNIKSLI--PGGFSLTVIKQDGSLWQLGLSVNGSVSNDVEYTLV 288
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
Q + L + G + + ++TWG N G GS++ + +P+
Sbjct: 289 Q----------VPGLSHVVSAAAGQNNFMAILQDQTVWTWG---NALPGYGSMNTV-TPQ 334
Query: 333 RVQGPFSESPVDQVSC-GWKHTAAISEGKILTWG--WGGSHGTFSEDGH 378
VQ V+C GW A ++G + WG G G ++D H
Sbjct: 335 PVQVQGLSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDGTKDNH 383
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 84/303 (27%), Positives = 131/303 (43%), Gaps = 38/303 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A++ A+ L + G V+ G G N +L P++ L +V+ IS G
Sbjct: 51 ITAISANEAYALAMKSDGTVWGWGTGPLGNNDADSN--SALVPVQAKNLT-DVIAISAGG 107
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ A+ DG ++ WG N G+LG G + P P V LSGI A G+ +A+
Sbjct: 108 DVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAP--VPSLSGI--SAIATGYSYCLAL 163
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V +WG+ +G LG G + TP I L GV V I AA + S
Sbjct: 164 KNDGTVWAWGSNQNGALGDGT---------TDDRKTPVQISGLSGV-VSI-AANYHSSYA 212
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS------EEVVCGGYHTCVLTSG 306
I +G V+ +G L +G S LP + + ++ GG+ V+
Sbjct: 213 IKSDGTVWAWG-------LNDQGQLGDGLSKDQWLPINTGLSNIKSLIPGGFSLTVIKQD 265
Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
G L+ G + NG + S DV ++ +V G S V + G + AI + + + W W
Sbjct: 266 GSLWQLGLSVNGSV---SNDVEYTLVQVPG---LSHVVSAAAGQNNFMAILQDQTV-WTW 318
Query: 367 GGS 369
G +
Sbjct: 319 GNA 321
Score = 67.8 bits (164), Expect = 9e-09, Method: Composition-based stats.
Identities = 95/383 (24%), Positives = 158/383 (41%), Gaps = 68/383 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G + +W P+ ++K+L GG + + G ++ GL+ G
Sbjct: 222 WGLNDQGQLGDGLSKDQWLPINTGL---SNIKSLIPGGFSLTVIKQDGSLWQLGLSVNGS 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+S ++ Y+L +++ GL VV + G ++ AI D ++ WG N G G
Sbjct: 279 --VSNDVEYTL--VQVPGLS-HVVSAAAGQNNFMAILQDQTVWTWG---NALPGYGSMNT 330
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V P P +V+ LSG ++ A LG+ +A+ G V +WG +G LG G + + +
Sbjct: 331 -VTPQPVQVQGLSGTYSAVACLGW-YDLALKTDGTVWAWGNNMNGELGDGTKDNHFVPSQ 388
Query: 223 STSEYTP--------RLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRA--VDKM 270
+ ++ TP L+ L E + I + + + G V + D+ V
Sbjct: 389 NFADKTPMAATVGNVSLVNTLYSEPYAITIRFTKPMLQSTFNTQGNVTLRDDQGQEVALD 448
Query: 271 LFQEGNHARRPSLISKLP-------------------------------------YSEEV 293
L QEG R + + P + V
Sbjct: 449 LTQEGPDLGRMLIKTVAPLSLGQHYTLHLANLMDLDGLTLPDYTYDFTVSLPFNTFQGGV 508
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
G H+ L++G + WGSN G LG G+ +P RVQG ++ V+ G H+
Sbjct: 509 SAGDSHS--LSAGEYVMAWGSNTYGQLGDGTNIQRSTPVRVQGLKGQA--SSVAAGGTHS 564
Query: 354 AAISEGK-ILTWGWGGSHGTFSE 375
A+ + K + WG HG +
Sbjct: 565 LALLQDKSVAAWG-NNDHGQLGD 586
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
T Q + S +++ G V++WG+ G+LG G + TP ++ L+G
Sbjct: 503 TFQGGVSAGDSHSLSAGEYVMAWGSNTYGQLGDGT---------NIQRSTPVRVQGLKGQ 553
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCG 296
+AA G HS + ++ V +G+ D +G+ R + ++ L + G
Sbjct: 554 ASSVAAGG-THSLALLQDKSVAAWGNN--DHGQLGDGSFTNRNTAATVNGLSDIVGIAAG 610
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
H+ + S G ++ WG N +G LG G++ +P +V+G S V +++ G + AI
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKG---LSQVTKIAAGGDTSLAI 667
Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+ +GK+ W WG ++DG G + Q TP
Sbjct: 668 TADGKV--WAWGN-----NQDGQLGDGTTN-NQSTP 695
>gi|296445916|ref|ZP_06887867.1| regulator of chromosome condensation RCC1 [Methylosinus
trichosporium OB3b]
gi|296256584|gb|EFH03660.1| regulator of chromosome condensation RCC1 [Methylosinus
trichosporium OB3b]
Length = 492
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 144/327 (44%), Gaps = 23/327 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G++ R PV S + A++ G H+ LT G V G N GQ
Sbjct: 115 WGRNDYGQLGDGTMVRRSSPVSVSGLPS-DIVAISMGDGHSCALTSAGAVECWGWNQVGQ 173
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P ++ L VV I++G HS A+T G + WG N GQLG G
Sbjct: 174 LGDGTYPNRS-APGVVTRLSSGVVAIASGDVHSCALTSVGAVKCWGSNVAGQLGAGTPTY 232
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
PI ++G+ + A+ G + S A+ G V WG+ G+LG G ++
Sbjct: 233 HRTPIG-----VTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTAN---- 283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP + L V I A G+ HS + + G V +GD + ++
Sbjct: 284 -----RATPVAVPSLSSGVVAITA-GWGHSCALTKAGAVVCWGDNSNGQIGDGTTTTRHT 337
Query: 281 PSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P ++S L + G H C L G + WGSN++G LG ++ +P V P
Sbjct: 338 PVVVSGLTSGVVAIATGSNHNCALKGNGAVLCWGSNQDGVLGDRTMTNRTTPVAV--PGH 395
Query: 340 ESPVDQVSCGWKHT-AAISEGKILTWG 365
V ++ G HT IS G + WG
Sbjct: 396 TRGVVAIALGSDHTCVTISSGVVRCWG 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 132/286 (46%), Gaps = 20/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P V + + A+A G H+ LT G V G N GQ
Sbjct: 166 WGWNQVGQLGDGTYPNRSAPGVVTRLSS-GVVAIASGDVHSCALTSVGAVKCWGSNVAGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG Y P+ ++GL+ VV I+ G HS A+ G + WG NS+GQLG G A
Sbjct: 225 LGAGTPT-YHRTPIGVTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTAN 283
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ SG+ A G+ S A+T G V+ WG +G++G G
Sbjct: 284 RATPVAVP-SLSSGVVAITA--GWGHSCALTKAGAVVCWGDNSNGQIGDGT--------- 331
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ +TP ++ L V I A G H+ + NG V +G + + R +
Sbjct: 332 TTTRHTPVVVSGLTSGVVAI-ATGSNHNCALKGNGAVLCWGSN--QDGVLGDRTMTNRTT 388
Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++ ++ VV G HTCV S G + WGS+ G LG G+
Sbjct: 389 PVAVPGHTRGVVAIALGSDHTCVTISSGVVRCWGSDGLGQLGDGTF 434
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 136/295 (46%), Gaps = 24/295 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
L+ GG H+ L G V G ND+GQLG + S P+ +SGL ++V IS G HS
Sbjct: 96 LSMGGQHSCALPAAGGVSCWGRNDYGQLGDGTMVRRS-SPVSVSGLPSDIVAISMGDGHS 154
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTG 194
A+T G + WG N GQLG G + P + T++ SG+ A G S A+T
Sbjct: 155 CALTSAGAVECWGWNQVGQLGDGTYPNRSAPGVVTRLS--SGVV--AIASGDVHSCALTS 210
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V WG+ +G+LG G T TP + L V I A G HS +
Sbjct: 211 VGAVKCWGSNVAGQLGAGTP---------TYHRTPIGVTGLRSGVVAI-AGGNQHSCALA 260
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
G V +G + ++ +G A R + ++ S VV G H+C LT G +
Sbjct: 261 TAGAVKCWGSNSHGQL--GDGTTANRATPVAVPSLSSGVVAITAGWGHSCALTKAGAVVC 318
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
WG N NG +G G+ H+P V G S V ++ G H A+ G +L WG
Sbjct: 319 WGDNSNGQIGDGTTTTRHTPVVVSG--LTSGVVAIATGSNHNCALKGNGAVLCWG 371
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 29/237 (12%)
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + + + +V+ L G T +GF G G + +GAG + GQ S L
Sbjct: 50 KLGQTVKLVGEVDGLGGAPT--GTVGFADGAITLGAGPLSPYGAGQATLSMGGQHSCALP 107
Query: 220 FLRSTS-----------------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
S +P + L V I + G HS + G V +
Sbjct: 108 AAGGVSCWGRNDYGQLGDGTMVRRSSPVSVSGLPSDIVAI-SMGDGHSCALTSAGAVECW 166
Query: 263 GDRAVDKMLFQEGNHARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
G V ++ +G + R P ++++L + G H+C LTS G + WGSN G
Sbjct: 167 GWNQVGQL--GDGTYPNRSAPGVVTRLSSGVVAIASGDVHSCALTSVGAVKCWGSNVAGQ 224
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
LG G+ +P V G S V ++ G +H+ A+ + G + WG SHG +
Sbjct: 225 LGAGTPTYHRTPIGVTG--LRSGVVAIAGGNQHSCALATAGAVKCWG-SNSHGQLGD 278
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 9/260 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTC 301
L+ ++ ++ CG C
Sbjct: 281 LVERIDGLVSQIDCGRLRGC 300
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 20/280 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEF--------PSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L V CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+T+G N +G LG P+ V+ + V Q+ CG
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVE--RIDGLVSQIDCG 295
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 24/252 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
+ L+ G + WGSN G L + +V P + P S + +SCG HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 355 AIS-EGKILTWG 365
++ +GK+ T+G
Sbjct: 250 VLTQDGKVFTFG 261
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G P+L++ ++G+ +I
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQI 292
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
CG H+ + G ++ WG+ G LGIG ++ +P+++ ++ + QVSCG H+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLNDIKIIQVSCGHYHS 140
Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
A+S + ++ +W G +S GQL G+ PS+
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQ 169
>gi|149044295|gb|EDL97616.1| rCG42876 [Rattus norvegicus]
Length = 637
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 30/263 (11%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT V ++G G G+LG G FL TSE P++I ++ K+
Sbjct: 233 ISCGYYHSAFVT-KKVVYAFGLGQFGQLGLGT------FLFETSE--PKIIDRIKDQKIS 283
Query: 242 IAAAGFLHSACIDENGRVYIFGD 264
+ G H+A + + G +Y FGD
Sbjct: 284 HISCGENHTALMTDIGLMYTFGD 306
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 151/327 (46%), Gaps = 27/327 (8%)
Query: 50 RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
R G G L RP V + F K + A G + +TG V+ FG+
Sbjct: 6 RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ENI P + + +S G H++ +T + +LYM+G N+ GQLGLG K+A I
Sbjct: 61 AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
PT ++ L K AA G ++ T G V + G G+LG G F
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+TP I +K +AG SA + E+G+++++GD + ++ + ++ P ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ CG YH+ +T +Y +G + G LG+G+ S ++ + +
Sbjct: 226 VGKPISWISCGYYHSAFVTKK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISH 284
Query: 346 VSCGWKHTAAISE-GKILTWGWGGSHG 371
+SCG HTA +++ G + T+G G HG
Sbjct: 285 ISCGENHTALMTDIGLMYTFG-DGRHG 310
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 118/261 (45%), Gaps = 36/261 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G N+ GQLGLG + G FT KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQLSAGANTS 190
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G++G +S++ P + G + + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEV--TVGKPISWISCGYYH 239
Query: 250 SACIDENGRVYIFG-----DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
SA + + VY FG + LF+ P +I ++ + + CG HT +
Sbjct: 240 SAFVTKK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHISCGENHTAL 294
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 295 MTDIGLMYTFGDGRHGKLGLG 315
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 27 CKRWISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C + S+ + ++ +G G +G+LGLG+ L P + + + ++CG HT
Sbjct: 235 CGYYHSAFVTKKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTAL 294
Query: 86 LTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
+T+ G +Y G G+LG+ EN P S K VQ+
Sbjct: 295 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQL 338
>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
Length = 1114
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 151/332 (45%), Gaps = 32/332 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + +P + + ++ +ACG HT +T G +Y G++
Sbjct: 304 WGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYA 363
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P RISG + +V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 364 GLLGHGTDISHWI-PKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHG 422
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + I P +VE L+G+ T A G + AV GK+ +WG G
Sbjct: 423 NR--ENIAYPKEVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKN 480
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G V+ G V
Sbjct: 481 RLGHGDKEPRL---------KPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGS-TV 530
Query: 268 DKMLFQEGNHARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
L + P L+ KL EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 531 YGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGD 590
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+ +P V+ + V ++CG ++AAI
Sbjct: 591 GEDRKTPTLVEA-LKDKHVKYIACGANYSAAI 621
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 37/252 (14%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ ++G K A + + +P +E + A GF + VT
Sbjct: 237 GDVYVWGEIICDNAVKVGADKNATYLSTRADVLLPRPLESNVVLDVHHIACGFRHAAMVT 296
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG ++ PRL++ L V A G H+ +
Sbjct: 297 RQGEVFTWGEESGGRLGHGVGKDVI---------QPRLVESLAMTTVDFIACGEFHTCAV 347
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD L G P IS P V CG +HT ++TS G
Sbjct: 348 TMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISG-PLEGLQVASVTCGPWHTALVTSTG 406
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
+L+T+G G LG G+ + + P+ V+ + V+CG HTAA+ E
Sbjct: 407 QLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTI-AVACGVWHTAAVVEVIVTQSSSS 465
Query: 359 ---GKILTWGWG 367
GK+ TWG G
Sbjct: 466 VSSGKLFTWGDG 477
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 29/259 (11%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G+ H++ +T GE++ WG+ S G+LG G K + P VE L+ A
Sbjct: 281 DVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHG--VGKDVIQPRLVESLAMTTVDFIA 338
Query: 184 LGFEQSVAVTGGGKVLSWGAGG--SGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKV 240
G + AVT G++ +WG G +G LGHG + S + P+ I LEG++V
Sbjct: 339 CGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTD---------ISHWIPKRISGPLEGLQV 389
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
G H+A + G+++ FGD + + P + L + V CG +
Sbjct: 390 ASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVW 449
Query: 299 HTCVLTS-----------GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
HT + G+L+TWG + LG G + P V + +++
Sbjct: 450 HTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPA-LIDFNFHKIA 508
Query: 348 CGWKHTAAI-SEGKILTWG 365
CG T + + G + T G
Sbjct: 509 CGHSLTVGLTTSGHVFTMG 527
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 141/320 (44%), Gaps = 67/320 (20%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP V++AA LHS C+++
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+VCG HT LT G LY WG+N G LG G+ + L +P + E V+ +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPAHIMVE-KERVVEIAA 291
Query: 348 CGWKHTAAISE--GKILTWG 365
C HT+A G + WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T D E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK KV A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IK-----KVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 317 -SVILPHLTHLSCTDDVF 333
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 91/217 (41%), Gaps = 36/217 (16%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYH 299
H E+G VY +G ++ N P LI K+ EV CG +H
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVV---EVACGSHH 139
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
+ L + GE++ WG N G +G GS +P +V V ++CG + A+
Sbjct: 140 SMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDN 199
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
G++ WG+ G+ GQL G QLTP
Sbjct: 200 GEVYGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4322 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGR 4381
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4382 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4439
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4440 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4496
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4497 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4549
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4550 RPRLVAALQGKKVNRVACGSAHT 4572
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 147/321 (45%), Gaps = 23/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3278 GEATNGRLGLG-LSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3336
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3337 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3395
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3396 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3450
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3451 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3504
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3505 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3564
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3565 HG-LEGQKITRVACGSSHSVA 3584
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 765 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISTFSGKQAGKHVVHIACGSTY 823
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 824 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 881
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 882 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 932
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 933 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 992
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 993 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 1037
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4282 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4340
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4341 PRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4398
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4399 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4449
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4450 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4509
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4510 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4568
Query: 350 WKHTAAISEGKILTWG 365
HT A S K + G
Sbjct: 4569 SAHTLAWSTSKPASAG 4584
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3332 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3391
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3392 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3449
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3450 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3506
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3507 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3555
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3556 TVNRKPTLVHGLEGQKITRVACGSSHSVAWTT 3587
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 751
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISTFSG 807
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 808 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 855
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 856 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 915
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 916 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 974
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 975 VAAGSTHCLALTEDSEVHSWG 995
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 4216 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4273
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4274 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4331
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4332 HGNRSP--CDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4386
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4387 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4441 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4500
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4501 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4533
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 3260 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3319
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3320 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3377
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3378 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3428
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3429 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3488
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3489 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3546
Query: 370 HG 371
HG
Sbjct: 3547 HG 3548
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 3214 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3271
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVK-----KVAVHSGGR-HATALTV 3325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3326 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3385
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3386 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3441
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V S F KH + +ACG ++ +T G +Y G
Sbjct: 780 WGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 838
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 839 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 897
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 898 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 955
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 956 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 4211 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4269
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4270 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4329
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4330 LGHGNRSPC---------DRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYG 4380
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4381 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4441 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4495
Query: 384 LDR 386
+ R
Sbjct: 4496 VRR 4498
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 836 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 895
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 896 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 954
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 955 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 890 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 949
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 950 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 1006
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 1007 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 1036
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4480 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4539
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4540 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4574
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 709 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQ-GLASR--NIVKIAAHSD- 764
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 765 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACG 820
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 821 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 851
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 144/319 (45%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 2759 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 2817
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2818 TTQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 2870
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 2871 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 2926
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P I L V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 2927 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 2986
Query: 337 PFSESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 2987 -LDAVFVNRVACGSSHSIA 3004
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 2752 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2811
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 2812 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 2870
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2871 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2926
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 2927 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 2977
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 2978 NKKPALVIGLDAVFVNRVACGSSHS 3002
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 23/302 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 2681 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 2739
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 2740 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 2797
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 2798 QGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTLA 2848
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 2849 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 2908
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G + P+ + G V V+ G H A+++ G++ WG
Sbjct: 2909 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG-DND 2966
Query: 370 HG 371
HG
Sbjct: 2967 HG 2968
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 135/324 (41%), Gaps = 38/324 (11%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 215 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 260
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +P TK+
Sbjct: 261 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIA 317
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 318 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 368
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L + + V +A +G HS + G V+ +GD K+ N + +P L+ LP
Sbjct: 369 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 428
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVS 347
+ V G + L+S G+LYTWG + CLG ++ S R+ + V+
Sbjct: 429 QRVFAGSQFSVALSSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVA 486
Query: 348 CGWKHTAAI-SEGKILTWGWGGSH 370
H A+ S G++ WG S
Sbjct: 487 VSVAHCLALSSSGEVFGWGRNDSQ 510
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 346 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 405
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 406 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 463
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 464 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 519
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 26/281 (9%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 335
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +P T V LS ALG S+A+T
Sbjct: 336 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 393
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L V+ A + F S +
Sbjct: 394 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SVALS 442
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 443 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 502
Query: 311 TWGSNENGCLGIGSID---VLHSPERVQGPFSESPVDQVSC 348
WG N++ + S+ +L +P V P P ++C
Sbjct: 503 GWGRNDSQQICPASVSSEPLLRTPILVSLP--TFPASGIAC 541
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 126/271 (46%), Gaps = 24/271 (8%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2624 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 2681
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 2682 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVA 2732
Query: 245 --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
+G H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+
Sbjct: 2733 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 2792
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE 358
++S GELYTWG E G LG G P+ V + V QV+CG + T A++E
Sbjct: 2793 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTE 2851
Query: 359 -GKILTWGWG--GSHGTFSEDGHSSGGQLDR 386
G + +WG G G G +G + +++R
Sbjct: 2852 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIER 2882
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 165/367 (44%), Gaps = 32/367 (8%)
Query: 8 AMTKYYLKQDIKLG-SKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
+T L+ D+ L ++G R I+ ++ WG GRLG G + RP +
Sbjct: 249 VLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVE 308
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK- 123
+ ++ +ACG H+ ++ +G ++ G + G LG ++ Y + P R+SG +
Sbjct: 309 SLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWI-PKRVSGPLEG 367
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+VV ++ G HS+ T +G+L+ +G G LG G +A+ + P +V+ LSG +
Sbjct: 368 LQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKV 425
Query: 183 ALGFEQSVAV----------TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
A G S A+ ++ +WG G RLGH + + L P +
Sbjct: 426 ACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYL---------EPTCV 476
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-SKL--PY 289
+ A G+ + + +G V+ G + L + + P L+ KL +
Sbjct: 477 AAVAEYNFHQVACGYTMTVALTASGHVFSMGGTTYGQ-LGNPNSDGKVPILVRDKLVGEF 535
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
EE+ CG H VLTS ELYTWG NG LG G D SP V+ + V +SCG
Sbjct: 536 VEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEA-LKDRHVKNISCG 594
Query: 350 WKHTAAI 356
T+ I
Sbjct: 595 STFTSCI 601
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 146/315 (46%), Gaps = 44/315 (13%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYHH 134
G H +T G V+ G + G+LG ++ G + +E L I+ V ++ G +H
Sbjct: 269 GDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITN----VTFVACGEYH 324
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVT 193
S A++ G+L+ WG ++G LG IP +V L G+ A G S T
Sbjct: 325 SCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSALAT 384
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GK+ ++G G G LGHG +S+ P+ ++ L G K A G HSA I
Sbjct: 385 SNGKLFTFGDGRFGVLGHGNRASVA---------YPKEVQLLSGYKAIKVACGVWHSAAI 435
Query: 254 DENGRVYIFGDRAVDKMLFQEGN-------HARR-----PSLISKLP-YS-EEVVCGGYH 299
+ + + G +A K LF G+ HA + P+ ++ + Y+ +V CG
Sbjct: 436 ID--VMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTM 493
Query: 300 TCVLTSGGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
T LT+ G +++ G G LG G + +L +++ G F V+++SCG H A
Sbjct: 494 TVALTASGHVFSMGGTTYGQLGNPNSDGKVPILVR-DKLVGEF----VEEISCGANHVAV 548
Query: 356 I-SEGKILTWGWGGS 369
+ S ++ TWG G +
Sbjct: 549 LTSRSELYTWGRGAN 563
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 196 GKVLSWG---AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V WG A G+ G G S + F + T TP+ ++ + V G H A
Sbjct: 219 GDVYIWGEVWADGNSFDGLG--SQLQAFCK-TDVLTPKPLESDVVLDVHQIGPGDRHIAL 275
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELY 310
+ G V+ +G+ + ++ RP L+ L + V CG YH+C +++ G+L+
Sbjct: 276 VTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTSGDLF 335
Query: 311 TWGSNENGC--LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISEGKILTWGWG 367
TWG +G LG G+ P+RV GP V V+CG H+A A S GK+ T+G G
Sbjct: 336 TWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSALATSNGKLFTFGDG 395
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G++G+LGL + P + +ACG +HTL LT +G VY+ G
Sbjct: 4 WGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG LG S + S +VQI+ G +HS A+TV+G+L+ WG+ GQLG G
Sbjct: 64 FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+P V LS Q G + ++A+ G++ SWG G G+ GHG + +IL
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
P+L+ LE + A+AG H+ + G VY +GD ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
G +FGQLG+ + G PL R +E+ V+++ G H+ A+T G++Y +G+ +
Sbjct: 5 GCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G LG G + P+ V+ L G+ Q A G S A+T G++ SWG G G+LG G
Sbjct: 65 GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ L + T+ + RL+ ++ G ++ ID +G+++ +G +
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173
Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
++ P L+ L + G H LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
L WG GQLGL K AA V P+P + + + A G ++A+TG G V S+
Sbjct: 1 LVSWGCGEFGQLGL-KDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGHG S +P ++ L G+ + A G HS + G+++
Sbjct: 60 GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFS 110
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G ++ + +P ++ L +VVCG +T + S G+L++WG G
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQ 170
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
G G+ D + P+ V +++ V Q S G +H A+ S G + WG
Sbjct: 171 TGHGTQDNILVPKLVCSLENDNIV-QASAGARHAVALTSGGGVYAWG 216
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
++SWG G G+LG + + + PR ++ + A G H+ + +G
Sbjct: 1 LVSWGCGEFGQLGLKDAAGVF------TSPLPRFLRGSRELLFVRVACGSSHTLALTGSG 54
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY FG + P ++ L ++ CG H+C LT G+L++WG
Sbjct: 55 DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRG 114
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
+ G LG GS++ P V S+ + QV CG +T AI S+G++ +WG HG +
Sbjct: 115 KYGQLGCGSVENHLQPVPVT-ALSDRLLTQVVCGADYTMAIDSDGQLFSWG----HGHWG 169
Query: 375 EDGHSS 380
+ GH +
Sbjct: 170 QTGHGT 175
>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 1032
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 150/340 (44%), Gaps = 49/340 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
WG G GRLG P + +K +ACG HT LT++G VYA G
Sbjct: 328 WGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCS 387
Query: 97 -LNDFGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
L D G++ ++ + +E + IS I+ G H++ ++ G L+ +G +
Sbjct: 388 DLVDEGRIRSQWLTHKLSLPVEGISISS-------IACGEWHTAIVSSCGRLFTYGDGTF 440
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLSW 201
G LG G + P +VE L G+ + A G + A+ T GK+ +W
Sbjct: 441 GVLGHG--SYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTW 498
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G GRLGH + ++ P + +L + G + + + G+V+
Sbjct: 499 GDADEGRLGHAD---------NVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFA 549
Query: 262 FGDRAVDKMLFQEGN-HARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
G ++ GN H + +++ K Y + + CG YH VLTS G +YTWG E
Sbjct: 550 MGSAKYGQL----GNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGE 605
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
NG LG+G + ++P V+ + VD ++CG T AI
Sbjct: 606 NGELGLGDTENRYTPCFVEA-LRDRQVDTITCGPSFTVAI 644
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + ALG + VT G+V WG G GRLG + I
Sbjct: 294 VPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDI--------- 344
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
+P+++ L ++VK A G H+ + ++G VY +G+ L EG R L K
Sbjct: 345 SSPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEG-RIRSQWLTHK 403
Query: 287 LPYSEE------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
L E + CG +HT +++S G L+T+G G LG GS SP+ V+
Sbjct: 404 LSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVES-LKG 462
Query: 341 SPVDQVSCGWKHTAAISE------------GKILTWG 365
V V+CG HTAAI E GK+ TWG
Sbjct: 463 LCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWG 499
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 26/275 (9%)
Query: 107 ENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+N YSL P L S +V ++ G +H++ +T GE+Y WG+ G+ LG++ I
Sbjct: 287 QNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDI 344
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P V+ LS I K A G + A+T G+V +WG S S ++ R S
Sbjct: 345 SSPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSC-------SDLVDEGRIRS 397
Query: 226 EY-TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ T +L +EG+ + A G H+A + GR++ +GD + + P +
Sbjct: 398 QWLTHKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEV 457
Query: 285 SKLP--YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSP 331
L V CG +HT + TS G+L+TWG + G LG P
Sbjct: 458 ESLKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVP 517
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V V QVSCG T A++ GK+ G
Sbjct: 518 TCVSQLVDYDFV-QVSCGRMMTLALTNMGKVFAMG 551
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V+ WG G +G E + + S P+L++ + V+ A G H+A + + G
Sbjct: 267 VMVWGGGIGCLVGIVNERFVQNSIYS---LVPKLLESTAMLDVQNVALGGNHAAIVTKQG 323
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ + P ++ L + V CG YHTC LT GE+Y WG N
Sbjct: 324 EVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWG-N 382
Query: 316 ENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ C + G I ++ P + ++CG HTA +S G++ T+G G
Sbjct: 383 DVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYG----DG 438
Query: 372 TFSEDGHSS 380
TF GH S
Sbjct: 439 TFGVLGHGS 447
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG +S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQS-TIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGP---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + + G VY++G ++ G + P ++ L
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 318 STHTSAAKTQGGHVYMWG 335
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G SG LG LG +ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCSGCLG-------LGDAQSTIE--PRRLDSLSGKKIACLSYGSGPHVV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G G P RV G V ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------SSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 30/339 (8%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 G---------STVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P ++ L + V CG HT VLT G++Y WG+N G LG G+
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
P V + ++ +C HT+A G + WG
Sbjct: 298 SYPTPVTME-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G V+ +G A ++ N
Sbjct: 80 LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS +++V+ CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 138 HGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
V G V ++CG A+ + G++ WG+ G+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 140/276 (50%), Gaps = 28/276 (10%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYM 146
ETG V+ FG+ ++NI P + LK +V QIS G H++ IT +G L+M
Sbjct: 1 ETGAVFT-----FGKSKFADNI-----PSKFW-LKNDVPSQISCGDEHTALITKNGRLFM 49
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+G N+ GQLGLG K + PT V+ L AA G ++ TG G+V S G
Sbjct: 50 FGSNNWGQLGLGSKV--TVNKPTCVKALKSEKVLLAACGRNHTLICTGEGRVFSSGGNSE 107
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G T R I L+ + +K+ AAG SA + E+G+++++GD
Sbjct: 108 GQLGLGD---------CEERTTFRRIHALDSLGPIKMLAAGSNTSAALTESGKLFMWGDN 158
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
++ + +HA P +S V CG YH+ ++T+ G LYT+G ++G LG+ +
Sbjct: 159 TEGQIGLGKESHAPWPQEVSVGAPVSWVSCGYYHSALVTAAGALYTFGERDSGKLGLTTE 218
Query: 326 DVLHSPERVQGPFSE--SPVDQVSCGWKHTAAISEG 359
+ RV P PV QV+CG HT A++ G
Sbjct: 219 QLPR--HRVPQPVRSIGEPVRQVACGGGHTVALTGG 252
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 146/326 (44%), Gaps = 44/326 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
++CG HT +T+ G ++ G N++GQLG+ + + +P + LK E V ++ G +H
Sbjct: 31 ISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVN-KPTCVKALKSEKVLLAACGRNH 89
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVT 193
+ T +G ++ G NS GQLGLG + ++ L + K A G S A+T
Sbjct: 90 TLICTGEGRVFSSGGNSEGQLGLGDCEERTTF--RRIHALDSLGPIKMLAAGSNTSAALT 147
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GK+ WG G++G G+ES + P + G V + G+ HSA +
Sbjct: 148 ESGKLFMWGDNTEGQIGLGKES-----------HAPWPQEVSVGAPVSWVSCGYYHSALV 196
Query: 254 DENGRVYIFGDRAVDKM--LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGG--- 307
G +Y FG+R K+ ++ R P + + +V CGG HT LT GG
Sbjct: 197 TAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTR 256
Query: 308 ----------------------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
L+T+G + G LG G+ R+ F + V Q
Sbjct: 257 RRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVRQ 316
Query: 346 VSCGWKHTAAISEGKILTWGWGGSHG 371
V+CG H+A I++G +L G HG
Sbjct: 317 VACGENHSAVITDGGLLYTFGDGRHG 342
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 51/348 (14%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK D+ G + + R F ++G+ ++G+LGLGS + +P A +
Sbjct: 19 SKFWLKNDVPSQISCGDEHTALITKNGRLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 76
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
+ ACG HTL T G V+++G N GQLG+ E + RI L
Sbjct: 77 SEKVLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFR----RIHALDSLGP 132
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ ++ G + S+A+T G+L+MWG N+ GQ+GLGK++ P P +V G +
Sbjct: 133 IKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLGKESHA--PWPQEVSV--GAPVSWVSC 188
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ S VT G + ++G SG+LG E + P+ ++ + G V+ A
Sbjct: 189 GYYHSALVTAAGALYTFGERDSGKLGLTTE-------QLPRHRVPQPVRSI-GEPVRQVA 240
Query: 245 AGFLHSA------------------CIDENGRVYIFGDRAVDKMLFQEGN--------HA 278
G H+ +D G +++ DR L Q G +
Sbjct: 241 CGGGHTVALTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFES 300
Query: 279 RRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
R P L+ K +V CG H+ V+T GG LYT+G +G LG+G
Sbjct: 301 RLPRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGD 348
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G++GLG P S + ++CG H+ +T G +Y G D G
Sbjct: 154 MWGDNTEGQIGLGKESHAPWPQEVSV--GAPVSWVSCGYYHSALVTAAGALYTFGERDSG 211
Query: 102 QLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG------------------ 142
+LG++ E + P + + + V Q++ G H+ A+T G
Sbjct: 212 KLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTRRRPRCTRGFAVDLAG 271
Query: 143 -------ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
L+ +G GQLG G + +P VE +Q A G S +T G
Sbjct: 272 FLWLSEDRLFTFGLGQFGQLGHGTFVFES-RLPRLVEHFKKGRVRQVACGENHSAVITDG 330
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + ++G G G+LG G E+ T+++ P L
Sbjct: 331 GLLYTFGDGRHGKLGLGDEN-------FTNQFKPTLCSRF 363
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
W+S R F +G G +G+LG G+ ESR P + F+K ++ +ACG H+ +T
Sbjct: 274 WLSE--DRLFT--FGLGQFGQLGHGTFVFESRL-PRLVEHFKKGRVRQVACGENHSAVIT 328
Query: 88 ETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQ 127
+ G +Y G G+LG+ EN +P S K VQ
Sbjct: 329 DGGLLYTFGDGRHGKLGLGDENFTNQFKPTLCSRFLKYGVQ 369
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P + G ++ I+T H++AIT GELYMWG+
Sbjct: 183 ALG-HKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ + P + L+ V++ A G HS + + G+V +G ++
Sbjct: 299 -------NLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSL 351
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
+ + P+ I L + V CGG + +T GGEL+ WG+ ++ LG+ G ++ +P
Sbjct: 352 RNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411
Query: 333 RVQ 335
V
Sbjct: 412 EVN 414
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 137/330 (41%), Gaps = 84/330 (25%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT------------------KVECLSG 176
S IT+ +L+ WG+ ++GQLG G + ++ P P +++ S
Sbjct: 43 SDPITL--QLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESS 100
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI------------------L 218
F + G S +T G + WG G GRLG GQE+S+ L
Sbjct: 101 SFPIGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIAL 159
Query: 219 GFLRS-------------------------TSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G L S T E PR + K+ A H+A I
Sbjct: 160 GGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAI 219
Query: 254 DENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
E+G +Y++G D EG PS + L V CGG+ T LT
Sbjct: 220 TESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTK 279
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKHTAAIS-EGKILT 363
G+L+ WG+N N LG G D L E + P +S + Q++CG H+ A++ EGK+L+
Sbjct: 280 EGQLWNWGANSNYELGRG--DNLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLS 337
Query: 364 WGWGGSHGTFSEDGHSSGGQLDRGQLTPSE 393
WG GG HG G+SS R Q P+E
Sbjct: 338 WGHGG-HGQL---GNSS----LRNQKIPTE 359
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG SL ++ P A + +ACGG+ + +T+ G ++ G Q
Sbjct: 338 WGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQ 397
Query: 103 LGISENIGYSLEPLRISGLKKE-------VVQISTGYHHS 135
LG+ P+ ++ L +E V+ +S G H+
Sbjct: 398 LGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHA 437
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 45/303 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + S + ++A GG HTL L++TG V+ G GQLG+ + P I
Sbjct: 199 PAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPFT 258
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q +TG H SS + NG L P +V G + K+
Sbjct: 259 E----QPTTGKHRSSVV------------HNGSTNL----------PAQVSNFPGSYVKE 292
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G S VT G +L++G G G+ GHG + + P + L G++++
Sbjct: 293 IACGGRHSAVVTDAGTLLTFGWGLYGQCGHGS---------TNDQLRPTSLPSLSGIQIE 343
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGNHARR----PSLISKLPYSEEVVC 295
AAG H+ CI +GRVY+FG ++ +G R P L SKL + V C
Sbjct: 344 RIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKL--VKMVSC 401
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H+ +L G++++WG N+ G LG+G ++P +V P V+CGW HT
Sbjct: 402 GARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQV--PIEGCRPKMVACGWWHTLL 459
Query: 356 ISE 358
++E
Sbjct: 460 LAE 462
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 40/261 (15%)
Query: 111 YSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
+++ P +S G + ++ G H+ A++ G+++ WG GQLGLG + K++ P
Sbjct: 195 FTVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRV-KMVSSPH 253
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+ FT+Q G +S V G L P
Sbjct: 254 LIP-----FTEQPTTGKHRSSVVHNGSTNL-----------------------------P 279
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP- 288
+ G VK A G HSA + + G + FG + N RP+ + L
Sbjct: 280 AQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSLSG 339
Query: 289 -YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQV 346
E + G +HT +T G +Y +G N+ G LG G+ P ++ P ES V V
Sbjct: 340 IQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKLVKMV 399
Query: 347 SCGWKHTAAISE-GKILTWGW 366
SCG +H+A + E G++ +WGW
Sbjct: 400 SCGARHSAILLEDGQVFSWGW 420
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G YG+ G GS + RP + ++ +A G HT+ +T G VY G N FGQ
Sbjct: 312 FGWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQ 371
Query: 103 LGISENIGYSLEP-LRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G +L L L+ ++V+ +S G HS+ + DG+++ WG N GQLG+G
Sbjct: 372 LGTGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDS 431
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF 186
+ P +E G K A G+
Sbjct: 432 IDRNTPTQVPIE---GCRPKMVACGW 454
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 38/144 (26%)
Query: 281 PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGP 337
P+++S P V GG HT L+ G+++ WG G LG+GS + ++ SP + P
Sbjct: 199 PAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLI--P 256
Query: 338 FSESP----------------------------VDQVSCGWKHTAAISE-GKILTWGWGG 368
F+E P V +++CG +H+A +++ G +LT+GW
Sbjct: 257 FTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGW-- 314
Query: 369 SHGTFSEDGHSSGGQLDRGQLTPS 392
G + + GH S R PS
Sbjct: 315 --GLYGQCGHGSTNDQLRPTSLPS 336
>gi|293344078|ref|XP_001080802.2| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|293355949|ref|XP_344892.4| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|149055831|gb|EDM07262.1| similar to Gnefr protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 450
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 160/361 (44%), Gaps = 59/361 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P S F K +K++ GG H++ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTDTGSTFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE V A AG HSA + + G +Y++G
Sbjct: 194 LPL--FLTAKE---PSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWG----------R 238
Query: 275 GNHARRPSLISKLPYSEEVVC-------------GGYHTCVLTSGGELYTWGSNENGCLG 321
H + SL + LP + V G H T G+++TWG + G LG
Sbjct: 239 NKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Query: 322 I----------GSIDVLHSPERVQGPFSESPVD------QVSCGWKHTAAISEGKILTWG 365
G D + +R+Q SP+ +VSCG +H A+ K +WG
Sbjct: 299 RTLGSPEAQKHGEQDSSLAFQRLQNSVP-SPLHCLTGAAEVSCGSEHNLAVIRDKCCSWG 357
Query: 366 W 366
W
Sbjct: 358 W 358
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 143/334 (42%), Gaps = 34/334 (10%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E R +C ++ +ACG T+ LTE G V + G N FGQLG+
Sbjct: 79 GQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK---NSNGQLGLGKKAAKVI 165
+ P I L+++VV ++ G H+ A T G + WG +S +L G+ +
Sbjct: 139 PRKCVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFL 198
Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P++V L A G + S ++T G++ W GR HGQ +S+ FL
Sbjct: 199 TAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVW-----GRNKHGQLASLATFLPL 253
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA----------------- 266
++ KV +G+ H E G+V+ +G RA
Sbjct: 254 PQRVEAHYFQD---EKVTAVWSGWTHLVAKTETGKVFTWG-RADYGQLGRTLGSPEAQKH 309
Query: 267 --VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
D L + PS + L + EV CG H + + +WG NE+G G G+
Sbjct: 310 GEQDSSLAFQRLQNSVPSPLHCLTGAAEVSCGSEHNLAVIR-DKCCSWGWNEHGMCGDGT 368
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
+ +P VQ S S + V CG H+ A+ +
Sbjct: 369 ESNVWTPTPVQALPSPSRLLLVGCGAGHSLALCQ 402
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 36/292 (12%)
Query: 92 VYATGLNDFGQLGI--SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMW 147
++A G N +GQLG+ E++ L P ++S K + ++ G HS +T G L++
Sbjct: 17 LFAWGANSYGQLGLGHKEDV---LLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVC 73
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G
Sbjct: 74 GLNKDGQLGLG-HTEEVLRF-TICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG 131
Query: 208 RLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD- 264
+LG HG ++ P+ I+ L KV AAG H+ + G + +G
Sbjct: 132 QLGVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTDTGSTFQWGTG 180
Query: 265 -RAVDKMLFQEGN-----HARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSN 315
+ + L N A+ PS ++ L S VVC G H+ LT GELY WG N
Sbjct: 181 LASSGRRLCPGQNLPLFLTAKEPSRVTGL-ESSTVVCAVAGSDHSASLTDTGELYVWGRN 239
Query: 316 ENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
++G L L P+RV+ F + V V GW H A +E GK+ TWG
Sbjct: 240 KHGQLA-SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 156/327 (47%), Gaps = 27/327 (8%)
Query: 43 WGNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG GD G+LG SLE+ + P +++ + ++ACG H + LT V +
Sbjct: 1237 WGAGDRGQLG--SLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLS 1294
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G +FGQLG+ N+ P + L + +I G HS+AI G++ +WGKN G
Sbjct: 1295 WGAGEFGQLGLDHNLSKG-TPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYG 1353
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G + P + L G + A LG ++ V KV + G+ G+LG
Sbjct: 1354 QLGHGDTKSCSAPRVNQYLRLEGK-VRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDD 1412
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S T + P I+EL G + AAG HS + G V+ +G ++ +
Sbjct: 1413 PS-------RTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHE 1465
Query: 274 EGNHARRPSLI---SKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
P+ + K+P + + CG + +++ GE++TWG+ E+G LG + +
Sbjct: 1466 TITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTY 1525
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAI 356
+P ++ FSE V Q++CG+KH A I
Sbjct: 1526 APSLIKD-FSE--VVQIACGFKHMAGI 1549
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 175/386 (45%), Gaps = 34/386 (8%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+GR L + +Y K+ + + KR+ WG G GRLG G
Sbjct: 1144 IGRILQCLVRYSEKKHFE-QIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYST 1202
Query: 62 PVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN-----IGYSLEP 115
P ++F ++ + +ACG H+L + G VYA G D GQLG EN I Y+ P
Sbjct: 1203 PQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNP 1262
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
+ LK+ ++ I+ G H+ +T + ++ WG GQLGL +K P V+ L
Sbjct: 1263 QPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSK--GTPQMVKAL 1320
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK- 233
G + G S A+ GK+L WG G+LGHG S PR+ +
Sbjct: 1321 DGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSC---------SAPRVNQY 1371
Query: 234 -ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS 290
LEG KV+ A G H+ + +V+ G ++ + + + P I +L
Sbjct: 1372 LRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGK 1430
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP----ERVQGPFSESPVD 344
+V G H+ L+ GE+++WG + G LG +I +P ER + P V
Sbjct: 1431 NICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIP---PDVK 1487
Query: 345 QVSCGWKHTAAIS-EGKILTWGWGGS 369
++CG+ +AA+S +G++ TWG G S
Sbjct: 1488 SIACGYTFSAAMSAKGEVFTWGNGES 1513
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 30/330 (9%)
Query: 4 RSLTAMTKYY--LKQDIKLGSKLGICKRWISST--LQRRFAALWGNGDYGRLGLGSLESR 59
R +T Y L ++ G + KR+I LQ +WG+G+ G+LG S E +
Sbjct: 52 REAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGKLGNQSEEIQ 111
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEP 115
P + AF +K A G HTLFL+ G V + G N +GQLG+ +++ EP
Sbjct: 112 HVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEP 171
Query: 116 LRISGLKK---------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
+ L K +V I+ GY+HS A+ G+++ WG S G+LG+G A
Sbjct: 172 SKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANA--E 229
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P V L A G + A+T G V +WG G G+LGH E
Sbjct: 230 SPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKS---------VKEE 280
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
++PRL L + G H+ I +G++Y G ++ + P+L++
Sbjct: 281 FSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTG 340
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
+ ++ G + LT+ G+++ +G+
Sbjct: 341 FANEKVIDIDAKGCRSIALTNTGKVFAFGN 370
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 23/279 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G ++GRLGLG + PV + + +ACG H L LTE VYA G +G
Sbjct: 1668 GGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S N LEP +S L ++ + G HS+A++ G+L+MWGKNSNGQLGLG +A
Sbjct: 1728 GVS-NTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA 1786
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGGGKVLSWGAGGSGRLGHGQESSILGF 220
PTK+ L G+ +LG S + + + G +G+LG LG
Sbjct: 1787 AE-DSPTKISNLDGVVM-DVSLGANHSAVLMQVTSPNLFTCGLNANGQLG-------LGD 1837
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG----- 275
S T + L+ ++ A+ G H+A + + G + +G+ ++ + G
Sbjct: 1838 FVDRSTLTA--VDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDI 1895
Query: 276 -NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
N + P++ + P +VVCG T V++ GELY G
Sbjct: 1896 ENPVQLPAICND-PMV-KVVCGQEVTIVVSEKGELYMAG 1932
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 15/278 (5%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C RW + TL L WG G++G+LGL S+ P + A + + + CGG H+
Sbjct: 1278 CGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAA 1337
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSL----EPLRISGLKKEVVQISTGYHHSSAITVD 141
+ E+G + G N +GQLG + S + LR+ G +V G +H+ + V
Sbjct: 1338 ILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEG---KVRTAGLGANHTLVVMVA 1394
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+++ G N +GQLGL + +P +E L+G Q A G + S+A++ G+V SW
Sbjct: 1395 NKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSW 1454
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGH + L TP L + VK A G+ SA + G V+
Sbjct: 1455 GGSPFGQLGHETITDKLA-------PTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFT 1507
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+G+ ++ PSLI ++ CG H
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKH 1545
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 15/294 (5%)
Query: 43 WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+G G +GRLG G S ES P K S+ +ACG T LT+TG VY G
Sbjct: 520 YGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGK 579
Query: 98 NDFGQLGISENIGYSL-EPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ G+LG+ ++ P + L VV QIS G +H++ T + ++WG N+ GQL
Sbjct: 580 SAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQL 639
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ + +P P ++ L + A G ++ T G V+S G G G+LGHG
Sbjct: 640 GI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYE 698
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S+ L T Y ++++ + +AG SA I GR++ +G + + L E
Sbjct: 699 SLTA-LSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWG-KGDEYQLGHES 756
Query: 276 N----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + R +K+ +V G H L G Y+WG+ G LG G +
Sbjct: 757 SKNEAYPREVEFFAKIRVV-DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEM 809
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 156/338 (46%), Gaps = 24/338 (7%)
Query: 31 ISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
S++ Q+R + WG G+LG+ L++ P + + S+ ++ + F+T+
Sbjct: 1601 FSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTD 1660
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G +Y +G ++ G+LG+ ++ + P+ I L ++++++ G +H A+T + +Y W
Sbjct: 1661 SGSLYVSGGSEHGRLGLG-HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G G G+ + P ++ L+ G S A++ G + WG +G
Sbjct: 1720 GDGKWGNAGVSN--TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNG 1777
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G S+ +E +P I L+GV + + + G HSA + + +F
Sbjct: 1778 QLGLGTTSA--------AEDSPTKISNLDGVVMDV-SLGANHSAVLMQVTSPNLFTCGLN 1828
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGI- 322
G+ R +L + + + CG HT ++ G+L TWG+ NG LG+
Sbjct: 1829 ANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLK 1888
Query: 323 -GSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
G + +P VQ P P+ +V CG + T +SE
Sbjct: 1889 AGLSKDIENP--VQLPAICNDPMVKVVCGQEVTIVVSE 1924
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 26/289 (8%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGK 149
V+ G + G+LG SE I + P + + +V++ + G H+ ++ DG + G
Sbjct: 92 VFMWGDGENGKLGNQSEEIQHV--PYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149
Query: 150 NSNGQLGLGKKA-AKVIPI--PTKVECLSGIFTKQAAL--------GFEQSVAVTGGGKV 198
N GQLG+G ++ P+ P+K + L + +L G+ S+A+ GK+
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG+G G+LG G +++ +PR + L+ KV A G H+A I G
Sbjct: 210 FSWGSGSWGKLGIGSDAN---------AESPRFVASLQNSKVVHIACGAHHTAAITTVGD 260
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNE 316
V+ +G ++ + P L + L ++++ CG HT V+ G+LY+ G+N
Sbjct: 261 VWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANT 320
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
+G LG+G P V G +E +D + G + A + GK+ +G
Sbjct: 321 HGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFG 369
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Query: 18 IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKAL 76
I LG C S+ + + F +WG+ +G+LG+ + S P ++ + +++++
Sbjct: 612 ISLGRNHAAC----STDMHKFF--VWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSI 665
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--------VQI 128
ACGG HTL T TG V + G GQLG + + + KK V V++
Sbjct: 666 ACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKV 725
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G S+AIT G L+ WGK Q LG +++K P +VE + I ++G
Sbjct: 726 SAGKESSAAITNKGRLFTWGKGDEYQ--LGHESSKNEAYPREVEFFAKIRVVDVSIGDSH 783
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQ 213
+A+ G SWG G +G+LGHG+
Sbjct: 784 MLALDYSGLPYSWGNGSAGQLGHGE 808
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 49/332 (14%)
Query: 44 GNGDYGRLGLGS-LESRWRPVVCSAFEK------------HSLKALACGGAHTLFLTETG 90
G+ YG+LG+G + SR PV + +K +++ +A G H+L L +TG
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTG 207
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+++ G +G+LGI + S +VV I+ G HH++AIT G+++ WGK
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQ LG K+ K P L ++ G + ++ + G++ S GA G+LG
Sbjct: 268 LRGQ--LGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLG 325
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +T P L+ KV A S + G+V+ FG+
Sbjct: 326 LGD---------ATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNET---- 372
Query: 271 LFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW---GSNENGCLGIGS 324
E + R P ++ LP S+ ++ + ++ G+L+ W S E S
Sbjct: 373 ---EPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEE------S 423
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
+L S ++G V ++ CG H A I
Sbjct: 424 SRMLESFHAIKG------VVRMFCGHNHMAVI 449
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 132/321 (41%), Gaps = 39/321 (12%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLE----PLRISGLKK-EVVQISTGYHHSSAITVDGEL 144
G +Y G FG+LG S E P RI L K VV I+ G ++A+T G++
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WGK++ G+LGLG I +P V+ LS Q +LG + T K WG+
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSN 634
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG SS + P I L ++ A G H+ G V G
Sbjct: 635 TFGQLGIPHISSYMP--------DPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV------------CGGYHTCVLTSGGELYTW 312
++ G++ +L LPY +++V G + +T+ G L+TW
Sbjct: 687 GWHGQL--GHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTW 744
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
G + LG S P V+ F++ V VS G H A+ L + W
Sbjct: 745 GKGDEYQLGHESSKNEAYPREVEF-FAKIRVVDVSIGDSHMLALDYSG-LPYSW------ 796
Query: 373 FSEDGHSSGGQLDRGQLTPSE 393
G+ S GQL G++ E
Sbjct: 797 ----GNGSAGQLGHGEMCERE 813
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 23/245 (9%)
Query: 141 DGELYMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
DG +Y +GK G+LG G ++ + + P ++E L+ + A G + + A+T GK
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V +WG G+LG LG + + P+L+++L V + G H+AC +
Sbjct: 574 VYTWGKSAQGKLG-------LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH 626
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
+ +++G ++ + ++ P I+ L + + CGG+HT + T+ G + + G
Sbjct: 627 KFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686
Query: 315 NENGCLGIGSIDVLHSPER--------VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+G LG G + L + + V+G F +S + +VS G + +AAI+ +G++ TWG
Sbjct: 687 GWHGQLGHGDYESLTALSKTLPYFKKIVEG-FGDSFIVKVSAGKESSAAITNKGRLFTWG 745
Query: 366 WGGSH 370
G +
Sbjct: 746 KGDEY 750
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 134/327 (40%), Gaps = 29/327 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT---LFLTETGCVYATGLND 99
WGNG+ G LG + P + F + + +ACG H +F + TG ++
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSE--VVQIACGFKHMAGIVFKPRMKTIELTGSSN 1565
Query: 100 FGQLGISENIGYSLEPLRISG----LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G S S+ +SG T +S G +++WG+++ GQL
Sbjct: 1566 IGD--NSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQL 1623
Query: 156 GL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ G +AA+ P+ ++ L + + S VT G + G GRLG G
Sbjct: 1624 GIRGLQAARS---PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHM 1680
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ TP I+ L VK+ A G H + E RVY +GD
Sbjct: 1681 AP---------APTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN 1731
Query: 275 GNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SP 331
N P +S L V GG+H+ L+ G+L+ WG N NG LG+G+ SP
Sbjct: 1732 TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSP 1791
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE 358
++ + V VS G H+A + +
Sbjct: 1792 TKISN--LDGVVMDVSLGANHSAVLMQ 1816
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 25/284 (8%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
++ T ++R A WG+G +G G+ + P S+ S+ + GG H+ L++ G
Sbjct: 1708 LALTEEKRVYA-WGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYG 1766
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI--TVDGELYMWG 148
++ G N GQLG+ P +IS L V+ +S G +HS+ + L+ G
Sbjct: 1767 DLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCG 1826
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N+NGQLGLG + T V+ L A+ G + AV+ G +++WG G +G+
Sbjct: 1827 LNANGQLGLGDFVDR--STLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQ 1884
Query: 209 LG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
LG G I ++ + ++K + G +V I + E G +Y+ G
Sbjct: 1885 LGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIV---------VSEKGELYMAG--- 1932
Query: 267 VDKMLFQEGNHARRPSL------ISKLPYSEEVVCGGYHTCVLT 304
+ + GN +RR + L ++ G H L
Sbjct: 1933 YESTIGLGGNSSRRREFDVSFREVEGLIQPTQIAVGSVHVLALV 1976
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 159/392 (40%), Gaps = 73/392 (18%)
Query: 35 LQRRFAALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+ + A+ N D G+LGL S + PV ++ +A G H+L L+ G V
Sbjct: 1393 VANKVFAMGSNID-GQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEV 1451
Query: 93 YATGLNDFGQLGISENIGYSLEP---LRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
++ G + FGQLG E I L P L + +V I+ GY S+A++ GE++ WG
Sbjct: 1452 WSWGGSPFGQLG-HETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGN 1510
Query: 150 NSNGQLG-----------LGKKAAKVIPIPTKVECLSGIFTK---------------QAA 183
+G+LG L K ++V+ I + ++GI K +
Sbjct: 1511 GESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNS 1570
Query: 184 LGFEQSVA---VTGG------------------------GKVLSWGAGGSGRLGHGQESS 216
F S+A V+G G V WG G+LG
Sbjct: 1571 TTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLG------ 1624
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
I G + S P L++ L + +A SA + ++G +Y+ G ++
Sbjct: 1625 IRGLQAARS---PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMA 1681
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
A P I L + +V CG YH LT +Y WG + G G+ + + + P+ +
Sbjct: 1682 PAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQEL 1741
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ + V G H+AA+S+ G + WG
Sbjct: 1742 SS-LAACSIIGVHAGGFHSAALSQYGDLFMWG 1772
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 150/379 (39%), Gaps = 66/379 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG S++ + P + ++ K + + CG HTL + +G +Y+ G N GQ
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + P ++G E V+ I S A+T G+++ +G + L +
Sbjct: 324 LGLGDATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRF 382
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW-----------------GAG 204
+P K + + + + A F A++ G++ W
Sbjct: 383 VAGLP---KSDLIIAV-ARTAHFDF----AISDTGQLFRWRPFSSEEESSRMLESFHAIK 434
Query: 205 GSGRL--GH-----------GQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHS 250
G R+ GH G +++ +STS + LE KI A ++
Sbjct: 435 GVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNT 494
Query: 251 ACIDE--------------NGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE 291
+DE +G +Y +G ++ + + P I L
Sbjct: 495 EYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMS 554
Query: 292 EV--VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVS 347
V CG T LT G++YTWG + G LG+GS L P+ VQ S V Q+S
Sbjct: 555 VVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQD-LSSHVVCQIS 613
Query: 348 CGWKHTAAISE-GKILTWG 365
G H A ++ K WG
Sbjct: 614 LGRNHAACSTDMHKFFVWG 632
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 148/393 (37%), Gaps = 75/393 (19%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------- 96
G +G+LGLG R P + + F + + G ++ LT TG V+A G
Sbjct: 317 GANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHL 376
Query: 97 ----------------------------LNDFGQLGISENIGYSLEPLRI---SGLKKEV 125
++D GQL E R+ K V
Sbjct: 377 NRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGV 436
Query: 126 VQISTGYHHSSAITVDGEL----YMWGKNSNGQLGLGKKAA--------KVIP-IPTKVE 172
V++ G++H A+ E+ M +N + A K++P + T E
Sbjct: 437 VRMFCGHNHM-AVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTE 495
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS-TSEYTPRL 231
L T Q S + G G + ++G G GRLGHG E + RS S P+
Sbjct: 496 YLDEFATVQV----RDSPSREGDGYIYTYGKGVFGRLGHGVE-----YTRSEESVKHPKR 546
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISKLPY 289
I+ L + V A G +A + + G+VY +G A K+ G P L+ L
Sbjct: 547 IETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDL-- 604
Query: 290 SEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
S VVC G H T + + WGSN G LGI I E+ +
Sbjct: 605 SSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRS 664
Query: 346 VSC-GWKHTAAISEGKILTW--GWGGS--HGTF 373
++C GW + + G +++ GW G HG +
Sbjct: 665 IACGGWHTLISTNTGSVMSCGKGWHGQLGHGDY 697
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 28/263 (10%)
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLG-----KK 160
NIG L+ L KK QI + + ++GE +Y WG NG+LG G
Sbjct: 1143 NIGRILQCLVRYSEKKHFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYST 1202
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P+ + + + A G E S+A + G V +WGAG G+LG S+ F
Sbjct: 1203 PQEITSFPSNTKIV------EVACGCEHSLARSFDGGVYAWGAGDRGQLG-----SLENF 1251
Query: 221 --LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
++ + P+ + L+ + A G H+ + +V FG +D L
Sbjct: 1252 DCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNL-S 1310
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+G +L + P +++CGG+H+ + G++ WG N G LG G +P
Sbjct: 1311 KGTPQMVKALDGRAPC--KILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRV 1368
Query: 334 VQGPFSESPVDQVSCGWKHTAAI 356
Q E V G HT +
Sbjct: 1369 NQYLRLEGKVRTAGLGANHTLVV 1391
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 134/272 (49%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP + L+G+ V+ A G+ H+ + + G+VY +G + ++ ++ P+ I
Sbjct: 244 NQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPI 303
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
S K E C HT T GG +Y WG
Sbjct: 304 SVEKDRIIEIAACHSTHTSAAKTQGGNVYMWG 335
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 25/293 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITV 140
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T
Sbjct: 58 VLYTTVNNEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT 116
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+GE++ WG N+ QLG G ++P LS + A G S+ +T G+V +
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCYISTN-LSNKQVIEVACGSYHSLVLTSDGEVFA 175
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRV 259
WG SG++G G + ++ PR + L+ V A G + S + + G V
Sbjct: 176 WGYNNSGQVGSGS---------TANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEV 226
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
Y++G ++ + P ++ L + + V CG HT VLT G++Y WG+N
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSY 286
Query: 318 GCLGIGSIDVLHSPERVQGPFS---ESPVDQVSCGWKHTAAISE--GKILTWG 365
G LG G+ S + P S + ++ +C HT+A G + WG
Sbjct: 287 GQLGTGN----KSNQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWG 335
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 62 TVNNEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG + A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P IS K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T+ C +F
Sbjct: 341 --SVTLPHLTRFSCTDDVF 357
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 1656 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 1715
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 1716 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 1773
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 1774 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1830
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 1831 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1883
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 1884 RPRLVAALQGKKVNRVACGSAHT 1906
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 150/328 (45%), Gaps = 21/328 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 610 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 670 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 728
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 729 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 782
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 783 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 837
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 838 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 897
Query: 336 GPFSESPVDQVSCGWKHTAAISEGKILT 363
G + +V+CG H+ A + + T
Sbjct: 898 G-LEGQKITRVACGSSHSVAWTTVDVAT 924
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 554 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 613
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 614 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 672
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 673 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 724 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 783
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 784 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 839
Query: 386 RGQLT 390
+ Q+
Sbjct: 840 KPQVV 844
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 1616 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 1674
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 1675 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 1732
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 1733 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 1783
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 1784 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1843
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 1844 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 1902
Query: 350 WKHTAAISEGKILTWG 365
HT A S K + G
Sbjct: 1903 SAHTLAWSTSKPASAG 1918
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 664 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 724 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 781
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 782 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 838
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 839 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 887
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 888 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 919
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 1550 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1607
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 1608 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 1665
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 1666 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1720
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 1721 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 1775 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1834
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 1835 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 1867
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 592 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 651
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 652 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 709
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 710 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 760
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 761 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 820
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 821 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 878
Query: 370 HG 371
HG
Sbjct: 879 HG 880
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 546 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 603
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 657
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 658 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 717
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 718 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 773
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1603
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 1604 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 1663
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 1664 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1714
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 1715 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 1775 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 1829
Query: 384 LDR 386
+ R
Sbjct: 1830 VRR 1832
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 1814 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 1873
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 1874 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 1908
>gi|421100544|ref|ZP_15561167.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200901122]
gi|410796347|gb|EKR98483.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200901122]
Length = 506
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 137/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+ G N+ GQLG N +S+ P+ + GLK +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VSFGQNNVGQLGNGANDLNADSFSMNPVAVVGLK-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A P KVE LSGI KQ A G + +A+ GK+ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L + AG S I ++G V +G
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428
Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H VL GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 143/317 (45%), Gaps = 31/317 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L GGAH+ FL + G VY TG N+FGQLG + G + + + I ++
Sbjct: 131 LGAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
S AI +G +Y WG N+ GQLG+G + A P PT V + A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLVPGIDDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
F ++ + G V+S+G G+LG+G L + S P + L+ V IA
Sbjct: 247 FNHALILKSDGTVVSFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLKDVIQVIA- 300
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + N A+ P + L +++ G H
Sbjct: 301 -GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359
Query: 301 CVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
L S G++Y+WG N +G LGI GS + P +V + S V + G + + +
Sbjct: 360 LALASDGKIYSWGLNASGQLGIGGNGSPNPTPIPTQVLNILNASSV--WAGGTQSFSILK 417
Query: 358 EGKILTWGWGGSHGTFS 374
G++ WG G+ +
Sbjct: 418 SGEVKGWGANGNTANLA 434
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-VIPIPTKVECL 174
L+KEV ++ G HS + +GE+Y G+N+ GQLG G + K+ +
Sbjct: 119 LQKEVNFYFGTKLGAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ + P L
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ ++ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 VPGID--DAVMGAYGFNHALILKSDGTVVSFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESP 342
L +V+ G H+ LT GE+Y WG N+ G LG G + + +P +V+G S
Sbjct: 292 LKDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEG---LSG 348
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ Q++ G H A+ S+GKI +WG S
Sbjct: 349 IKQIANGRDHILALASDGKIYSWGLNAS 376
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K V + + G + + G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 126/258 (48%), Gaps = 51/258 (19%)
Query: 43 WGNGDYGRLGLGSLESRWR----------PVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG Y +LG +L+ + P++ + ++ + CG HTLFL+ G V
Sbjct: 6 WGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNT--SFCIEKIICGWNHTLFLS-GGLV 62
Query: 93 YATGLN-------------------------DFGQLGISENIGYSLEPLRISGLKK-EVV 126
YA+GLN +FGQ+GI+ + P + L ++
Sbjct: 63 YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPII 122
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QI G HHS A+T+ G ++ WGKNS GQLGLG + ++ PTK++ ++G + + G
Sbjct: 123 QICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRL--FPTKIQSMNGKHVRYISCGE 180
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
E SV +T G+V ++G G SG+LGH + ++ P+++ +L G V A G
Sbjct: 181 EHSVLLTSAGRVYTFGCGSSGQLGHNE---------FEDQFIPKMVVDLMGTPVTQIACG 231
Query: 247 FLHS-ACIDENGRVYIFG 263
H+ A + + ++Y FG
Sbjct: 232 RKHTLAHVMKGNKLYSFG 249
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG + R P + ++ ++CG H++ LT G VY G GQ
Sbjct: 143 WGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSGQ 202
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKA 161
LG +E + + + + V QI+ G H+ A + G +LY +G N GQLG+G
Sbjct: 203 LGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKGQLGIGSYE 262
Query: 162 AKVIPIPT 169
IP+ T
Sbjct: 263 KARIPMLT 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 144 LYMWGKNSNGQLGLGKKAAK--------VIPIPT---------KVEC-------LSGIFT 179
+Y WG N+ QLG K P P K+ C LSG
Sbjct: 3 MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGGLV 62
Query: 180 KQAALGFEQSVAVTG------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ L ++ + ++ G V SWG+ G++G + F + S P+L++
Sbjct: 63 YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSK-----FHKYVS---PQLVR 114
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSE 291
+L + AG HS + +G ++ +G + ++ + P+ I + +
Sbjct: 115 DLSNCPIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVR 174
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
+ CG H+ +LTS G +YT+G +G LG + P+ V +PV Q++CG K
Sbjct: 175 YISCGEEHSVLLTSAGRVYTFGCGSSGQLGHNEFEDQFIPKMVVDLMG-TPVTQIACGRK 233
Query: 352 HTAA 355
HT A
Sbjct: 234 HTLA 237
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
++ GG+H+ LT G ++ WG N G LG+G P ++Q + V +SCG +
Sbjct: 123 QICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQS-MNGKHVRYISCGEE 181
Query: 352 HTAAI-SEGKILTWGWGGS----HGTFSE 375
H+ + S G++ T+G G S H F +
Sbjct: 182 HSVLLTSAGRVYTFGCGSSGQLGHNEFED 210
>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
Length = 1038
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 157/329 (47%), Gaps = 42/329 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQIS 129
S++A+A G HTLFL + G V++ G N+ G+LG + +++ P+ +SG +VQI+
Sbjct: 69 SVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSG-GVNIVQIA 127
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H+ A+ DG L+ WG NS+GQL L IP +V L+ T Q A G + +
Sbjct: 128 AGRAHNMAVADDGRLFAWGSNSHGQLALPSNITST-DIPKRVVSLTE--TVQVACGTDHT 184
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G++ WG GR+ Y P+ I+ + V AG +
Sbjct: 185 IAIVESGRIFVWGLQPDGRV----------------LYAPKEIEFFMALPVVQVNAGSDY 228
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
+ +G ++++G ++ + P+ ++ L +S VV CG HT LT
Sbjct: 229 YVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTL-HSLNVVHVACGHSHTVALTHE 287
Query: 307 GELYTWGSNENGCLGIG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
G L+ GS+ G LG G S + + + + G + V +V+CG HT A++ GK+
Sbjct: 288 GRLFVCGSDSCGQLGSGRKVPSQNTMLAVTEMLG----THVTRVACGRCHTLALAGGKMY 343
Query: 363 TWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+G S G G + R Q+TP
Sbjct: 344 AFGLNSS-------GQLGSGNV-RSQVTP 364
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +YG+LG + R P + ++ +ACG +HT+ LT G ++ G + G
Sbjct: 240 VWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCG 299
Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + L ++ L V +++ G H+ A+ G++Y +G NS+GQLG G
Sbjct: 300 QLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLALA-GGKMYAFGLNSSGQLGSGNV 358
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++V P P ++ L+ + + A G++QS +
Sbjct: 359 RSQVTPRP--IDALTDVVSVFA--GWDQSFCI 386
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 158/344 (45%), Gaps = 32/344 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G E +A + ++ A+ G ++L + G ++ G N G
Sbjct: 16 WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
LG P + L +VQ + G H A+ G Y WG N GQ G
Sbjct: 76 LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAER 135
Query: 158 ---GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G +A + IPIP + C + +Q A G SV +T G V +WG
Sbjct: 136 KEDGTRALRRDIPIPQR--CAPKLKVRQVAAGGTHSVVLTQDGHVWTWG----------- 182
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S TP ++ LE VK+ A G H+ + E+G ++ +G+ ++
Sbjct: 183 QPWPPGDIKQIS--TPVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
+ +P + L ++ GG+H+ LT GE+Y WG E+G LG G H
Sbjct: 239 DTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV 298
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V+ E + QVSCG H+ A++ +G++ ++G G HG
Sbjct: 299 PQKVELLAGED-IIQVSCGGTHSVALTRDGRMFSYG-RGDHGRL 340
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 130/294 (44%), Gaps = 15/294 (5%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLR--ISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
V A G + GQLG+ GY E ++ L V + G +S AI DG L+ W
Sbjct: 12 AVLAWGSGEDGQLGMG---GYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTW 68
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N G LG + K P V+ L+G+ QAA+G +AV G+ +WG G
Sbjct: 69 GWNQRGTLGHPPET-KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYG 127
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+ G E G R+ P + +KV+ AAG HS + ++G V+ +G
Sbjct: 128 QCGEEAERKEDG-TRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP 186
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+ Q P + L + + G +H LT G L+ WG+NE G LG G
Sbjct: 187 PGDIKQ----ISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQP 242
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHS 379
P RV+G S VD + GW TA EG++ WG G HG F +D S
Sbjct: 243 RSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWG-RGEHGRLGFGDDKSS 295
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E ++K +A G H L LTE G ++A G N++GQLG + S +P+R+ GL
Sbjct: 196 PVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRS-QPIRVEGL 252
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G + + +P KVE L+G
Sbjct: 253 SDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHM-VPQKVELLAGEDII 311
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 312 QVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRK 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ SL +A GG H+ LT+ G VYA G + G+
Sbjct: 227 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGR 286
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + P ++ L ++++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 287 LGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKV 346
Query: 162 AKVIPIPTKVE 172
P+ ++
Sbjct: 347 TTGHPMEVPID 357
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 47/322 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLE--- 114
P A S+ A GG H L + + G YA G N++GQ G E+ +L
Sbjct: 88 PAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDI 147
Query: 115 --PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN-SNGQLGLGKKAAKVIPIPTKV 171
P R + K +V Q++ G HS +T DG ++ WG+ G + K I P +V
Sbjct: 148 PIPQRCA-PKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPPGDI-------KQISTPVRV 199
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ L + K A+G ++A+T G + +WG G+LG G + P
Sbjct: 200 QGLENV--KVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGD---------TQPRSQPIR 248
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
++ L + + AAG HS + + G VY +G ++ F + + +L E
Sbjct: 249 VEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGE 308
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP------ 342
+++ CGG H+ LT G ++++G ++G LG G P V P P
Sbjct: 309 DIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEV--PIDLPPPGTSGG 366
Query: 343 -------VDQVSCGWKHTAAIS 357
V+CG +HT AI+
Sbjct: 367 DSGGQWQARYVACGGRHTLAIA 388
>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
Y-400-fl]
Length = 790
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 155/329 (47%), Gaps = 27/329 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + E + A+A G HT LT +G V G N GQ
Sbjct: 193 WGDNSSGQLGDGTTNDRNTPVDVAGLES-GVAAIAAGEGHTCALTTSGGVKCWGDNLEGQ 251
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+ ++GL+ +V I+ G+ H+ A+T G + WG NS+GQLG G
Sbjct: 252 LG-GGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTMTE 310
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + SG+ A G + A+T GG V WG G+LG+
Sbjct: 311 RNVPVGV-IGLESGVTAITAGGG--HTCALTTGGGVKCWGNNFYGQLGN----------- 356
Query: 223 STSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + P + ++ G+ + + AAG H+ + +G V +G + +G R
Sbjct: 357 -VTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGGVKCWGYNY--DVQLGDGTTTAR 413
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ + +VV GG HTC LT+ G + WG N N LG G++ ++P V G
Sbjct: 414 STPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMIDRNTPVDVIGL 473
Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWG 365
S V ++ G HT A++ + WG
Sbjct: 474 GSR--VTAITAGGNHTCALTTSDGVKCWG 500
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 157/333 (47%), Gaps = 26/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG + PV + + A+A GGAHT LT +G V G N Q
Sbjct: 346 WGNNFYGQLGNVTAHQPGIPVDVAGLGI-GVVAIAAGGAHTCALTTSGGVKCWGYNYDVQ 404
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL+ +VV I+ G H+ A+T G + WG+N N QLG G
Sbjct: 405 LGDGTTTARS-TPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMID 463
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ + G+ ++ A+ G + A+T V WG+ G+LGHG + F
Sbjct: 464 RNTPVD-----VIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGHGT----MNF 514
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP + L G V AAG+ H+ + +G V +G A D +G + R
Sbjct: 515 YG-----TPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWG--ANDSGQLGDGTRSDR 566
Query: 281 --PSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P +S L + G +HTC LT+ G + WGSN + LG ++ + P V G
Sbjct: 567 SIPVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQPYIPVDVFGL 626
Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
+S V ++ G HT A++ G WGG++
Sbjct: 627 WSG--VTAITAGLHHTCALTTGSAQVQCWGGNY 657
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 150/329 (45%), Gaps = 26/329 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +LG G++ R PV + A+ GG HT LT + V G N +GQ
Sbjct: 448 WGRNFNFQLGDGTMIDRNTPVDVIGLGSR-VTAITAGGNHTCALTTSDGVKCWGSNLYGQ 506
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P+ + GL +V I+ G+ H+ A+ DG + WG N +GQLG G ++
Sbjct: 507 LG-HGTMNFYGTPVDVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSD 565
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ +SG+ + AA+ G + A+T G V WG+ S +LG+
Sbjct: 566 RSIPVD-----VSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGN--------- 611
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNHA 278
+ Y P + L I A LH C G +V +G ++ N
Sbjct: 612 ITVGQPYIPVDVFGLWSGVTAITAG--LHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLR 669
Query: 279 RRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
R P + L SE + GG HTC LT G + WG N G LG GS+ +P V
Sbjct: 670 RFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDVI-- 727
Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWG 365
ES VD ++ G+ HT A++ K + WG
Sbjct: 728 RLESNVDAIAAGFFHTCALTTDKGVKCWG 756
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 151/330 (45%), Gaps = 27/330 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G++ R PV E + A+A GG+HT LT G V G N GQ
Sbjct: 91 WGDNSSGQLGDGTMNDRNTPVDVVGLES-GVAAIAAGGSHTCALTTNGGVKCWGANVSGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I YS P+ + L + V I+ G+ H+ A+T G + WG NS+GQLG G
Sbjct: 150 LGNETQIPYS-APVDVVELGRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTND 208
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ ++G+ + AA+ G + A+T G V WG G+LG G
Sbjct: 209 RNTPVD-----VAGLESGVAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIY----- 258
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S TP + LE V A G+ H+ + G V +G+ + ++ +G R
Sbjct: 259 ----SHITPVDVAGLES-DVAAIAVGWEHTCALTTVGGVRCWGNNSSGQL--GDGTMTER 311
Query: 281 PSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
+ + + GG HTC LT+GG + WG+N G LG + P V G
Sbjct: 312 NVPVGVIGLESGVTAITAGGGHTCALTTGGGVKCWGNNFYGQLGNVTAHQPGIPVDVAG- 370
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
V ++ G HT A+ + G + WG+
Sbjct: 371 -LGIGVVAIAAGGAHTCALTTSGGVKCWGY 399
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 138/296 (46%), Gaps = 18/296 (6%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ A+A G HT LT G V G N GQLG + P+ + GL+ V I+ G
Sbjct: 68 NITAIATGRYHTCALTTGGGVKCWGDNSSGQLG-DGTMNDRNTPVDVVGLESGVAAIAAG 126
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H+ A+T +G + WG N +GQLG + P+ VE G+F A G+E + A
Sbjct: 127 GSHTCALTTNGGVKCWGANVSGQLGNETQIPYSAPVDV-VELGRGVFDITA--GWEHTCA 183
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T GG V WG SG+LG G + TP + LE V AAG H+
Sbjct: 184 LTTGGGVKCWGDNSSGQLGDGT---------TNDRNTPVDVAGLES-GVAAIAAGEGHTC 233
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELY 310
+ +G V +GD ++ P ++ L + G+ HTC LT+ G +
Sbjct: 234 ALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVR 293
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
WG+N +G LG G++ + P V G ES V ++ G HT A++ G + WG
Sbjct: 294 CWGNNSSGQLGDGTMTERNVPVGVIG--LESGVTAITAGGGHTCALTTGGGVKCWG 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 125/270 (46%), Gaps = 29/270 (10%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ + I+TG +H+ A+T G + WG NS+GQLG G + P+ V SG+
Sbjct: 67 RNITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDV-VGLESGV--AAI 123
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + A+T G V WGA SG+LG+ E+ I P + EL G V
Sbjct: 124 AAGGSHTCALTTNGGVKCWGANVSGQLGN--ETQI-------PYSAPVDVVEL-GRGVFD 173
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTC 301
AG+ H+ + G V +GD + ++ N P ++ L + G HTC
Sbjct: 174 ITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESGVAAIAAGEGHTC 233
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
LT+ G + WG N G LG G+I +P V G ES V ++ GW+HT A++ G
Sbjct: 234 ALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAG--LESDVAAIAVGWEHTCALTTVGG 291
Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
+ W G++S GQL G +T
Sbjct: 292 VRCW------------GNNSSGQLGDGTMT 309
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 21/285 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G++ PV + A+A G HT L G V G ND GQ
Sbjct: 499 WGSNLYGQLGHGTMNFYGTPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWGANDSGQ 557
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ P+ +SGL V I+ G H+ A+T G + WG NS+ QLG
Sbjct: 558 LGDGTRSDRSI-PVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQ 616
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILG 219
IP+ + G+++ A+ G + A+T G +V WG G+LG G +
Sbjct: 617 PYIPVD-----VFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN---- 667
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
LR P+ + LEG + IAA G H+ + +G + +GD ++ +
Sbjct: 668 -LRRF----PQTVIGLEGSETAIAAGG-AHTCALTVSGGMKCWGDNFYGQLGDGSMHDRS 721
Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + +L + + + G+ HTC LT+ + WG N LG G
Sbjct: 722 TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDG 766
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P E S A+A GGAHT LT +G + G N +GQ
Sbjct: 653 WGGNYDGQLGDGTTNLRRFPQTVIGLEG-SETAIAAGGAHTCALTVSGGMKCWGDNFYGQ 711
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + L+ V I+ G+ H+ A+T D + WG N QLG G+
Sbjct: 712 LGDGSMHDRS-TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGRPLW 770
Query: 163 KVIPI 167
+ +P+
Sbjct: 771 RSVPV 775
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 81/220 (36%), Gaps = 51/220 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ R PV S + A+ G HT LT +G V G N Q
Sbjct: 550 WGANDSGQLGDGTRSDRSIPVDVSGLGS-GVAAITAGLFHTCALTTSGGVKCWGSNSSWQ 608
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKKA 161
LG + +G P+ + GL V I+ G HH+ A+T ++ WG N +GQLG G
Sbjct: 609 LG-NITVGQPYIPVDVFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN 667
Query: 162 AKVIP------------------------IPTKVECLSGIFTKQ---------------- 181
+ P + ++C F Q
Sbjct: 668 LRRFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDVI 727
Query: 182 --------AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
A GF + A+T V WG +LG G+
Sbjct: 728 RLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGR 767
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 163/353 (46%), Gaps = 33/353 (9%)
Query: 37 RRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R A L WG+G+ G+LG+G + + R A + +++ A+ G ++L + + G ++
Sbjct: 6 RPVAVLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTW 65
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N G LG P + L ++VQ + G H A+ G Y WG N GQ
Sbjct: 66 GWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQ 125
Query: 155 LGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G G +A + IPIP + C + +Q A G SV +T G V +WG
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTWG---- 179
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+ G +++ S TP ++ LE +V + A G H+ + + ++ +G+
Sbjct: 180 -------QPWPPGDIKNIS--TPVRVQGLE--QVSMIAVGAFHNLALSVDRILWAWGNNE 228
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P + L ++ GG+H+ LT GE+Y WG E+G LG G
Sbjct: 229 YGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGD 288
Query: 325 IDVLHS-PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
H P +VQ E V QVSCG H+ + S+G+I ++G G HG +
Sbjct: 289 DKSSHMVPLQVQLLAGEDIV-QVSCGGTHSVVLTSDGRIFSYG-RGDHGRLGD 339
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 114/259 (44%), Gaps = 13/259 (5%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V + G +S AI DG L+ WG N G LG + K P V+ L G+ QAA+
Sbjct: 43 VSAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPET-KTESSPAHVDALVGVKIVQAAI 101
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +AV G+ +WG G+ G E G R+ P + +KV+ A
Sbjct: 102 GGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDG-TRALRRDIPIPQRCALKLKVRQVA 160
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSEEVVCGGYHTCV 302
AG HS + + G V+ +G + G+ + P + L + G +H
Sbjct: 161 AGGTHSVVLTQEGHVWTWG------QPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLA 214
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
L+ L+ WG+NE G LGIG P RV+G + S VD + GW A EG++
Sbjct: 215 LSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVY 274
Query: 363 TWGWGGSHGT--FSEDGHS 379
WG G HG F +D S
Sbjct: 275 AWG-RGEHGRLGFGDDKSS 292
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 54 GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
G +++ PV E+ S+ +A G H L L+ ++A G N++GQLGI + S
Sbjct: 185 GDIKNISTPVRVQGLEQVSM--IAVGAFHNLALSVDRILWAWGNNEYGQLGIGDTQPRS- 241
Query: 114 EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P+R+ GL +V I+ G HS+A+T +GE+Y WG+ +G+LG G + + +P +V+
Sbjct: 242 QPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHM-VPLQVQ 300
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L+G Q + G SV +T G++ S+G G GRLG G++
Sbjct: 301 LLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRK 342
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R WGN +YG+LG+G + R +P+ SL +A GG H+ LT+ G VYA G
Sbjct: 219 RILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGR 278
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G+LG ++ + PL++ L +++VQ+S G HS +T DG ++ +G+ +G+LG
Sbjct: 279 GEHGRLGFGDDKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLG 338
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK----VLSW 201
G+K P+ + L T ++ G Q+ V GG+ +++W
Sbjct: 339 DGRKVTTGHPMEVPIN-LPPPKTSTSSEGLWQANYVACGGRHTLAIVTW 386
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 19/300 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
K E C HT T GG +Y WG + + + L S + V F+ V
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATPAV 341
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + ++P K+E
Sbjct: 13 LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 149/338 (44%), Gaps = 45/338 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG H+ +T++G +Y G ++F
Sbjct: 147 WGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNF 206
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + P R+ G + V ++ G H+ +T G+L+ +G + G LG G
Sbjct: 207 GLLGHGNSISH-WTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHG 265
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------------GGKVLSWGAGGS 206
+ K +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 266 DR--KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDK 323
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
RLGHG + L P + L + A G + + G +Y G +
Sbjct: 324 NRLGHGDKEQKL---------VPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVS 374
Query: 267 VDKMLFQEGNHARRPSLISKLP--------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++ G+ P +LP EEV CG YH LTS G++ TWG NG
Sbjct: 375 YGQL----GD----PQATGRLPGVLRLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANG 426
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
LG G + P V+ + V +VSCG T+AI
Sbjct: 427 RLGHGDAEDRDVPTLVEA-LRDKQVKKVSCGSSFTSAI 463
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 150/322 (46%), Gaps = 46/322 (14%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACG HT +T G V++ G G+LG + ++ + P I L VQ ++
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAH---PQLIDSLASSTVQYVA 181
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
G +HS A+T G+LY WG ++ G LG G + P L G+ A G
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGP-LEGVRVSSVACGPW 240
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+V VT G++ S+G G G LGHG S PR ++ L+G+K AA G
Sbjct: 241 HTVLVTSTGQLFSFGDGTFGVLGHGDRKSA---------SMPREVESLKGLKTLRAACGP 291
Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
H+A + E +G+++ +GD +++ + P+ ++ L +V
Sbjct: 292 WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFS--ESPVDQVSC 348
CG T LT+ G LYT GS G LG P+ R+ G + +++VSC
Sbjct: 352 ACGHSLTVALTTTGHLYTMGSVSYGQLG--------DPQATGRLPGVLRLGRTLIEEVSC 403
Query: 349 GWKHTAAI-SEGKILTWGWGGS 369
G H AA+ S+G + TWG G +
Sbjct: 404 GAYHVAALTSKGDVCTWGKGAN 425
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGG 195
V GEL+MWG+ G G+ KK +P V L + +Q A G + VT
Sbjct: 83 VFGELWMWGEGI-GDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTRQ 141
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V SWG GRLGHG ++ + P+LI L V+ A G HS + +
Sbjct: 142 GEVFSWGEESGGRLGHGVDADVA---------HPQLIDSLASSTVQYVACGEYHSCAVTQ 192
Query: 256 NGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+G +Y +GD + L GN +R + V CG +HT ++TS G+L+
Sbjct: 193 SGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLF 252
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 358
++G G LG G P V+ + +CG HTAA+ E
Sbjct: 253 SFGDGTFGVLGHGDRKSASMPREVES-LKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSL 311
Query: 359 -GKILTWGWG 367
GK+ TWG G
Sbjct: 312 SGKLFTWGDG 321
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 412 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 471
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 472 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 529
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 530 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 586
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 587 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 639
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 640 RPRLVAALQGKKVNRVACGSAHT 662
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 372 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 430
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 431 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 488
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 489 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 539
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 540 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 599
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 600 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 658
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 659 SAHTLAWSTSK 669
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 306 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 363
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 364 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 421
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 422 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 476
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 477 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 531 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 590
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 591 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 623
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 301 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 359
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 360 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 419
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 420 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 470
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 471 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 531 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 585
Query: 384 LDR 386
+ R
Sbjct: 586 VRR 588
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 570 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 629
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 630 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 664
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 136/300 (45%), Gaps = 19/300 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
K E C HT T GG +Y WG + + + L S + V F+ V
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATPAV 341
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + ++P K+E
Sbjct: 13 LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 33/333 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLND 99
+WG+ YG+LGL S E + F S ++ +ACG HT F+ + G VY+ G N+
Sbjct: 38 VWGSDTYGQLGLASREF-GKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNNN 96
Query: 100 FGQLGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+S + Y P + GLK + VQIS G +H++ + +G+L+ WG+N GQLG+
Sbjct: 97 QGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQNCEGQLGI 156
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
GK P ++ +F + G ++ +T K+ +G G G+LG G E
Sbjct: 157 GKSDNMTTPQIVDLKNNLAVF---VSCGKRNTMVITQTQKIFGFGDGKCGQLGLGNE--- 210
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQ 273
+EY PR + +++ + + G H+ ++E G + G+ +++ Q
Sbjct: 211 ------CNEYKPRQL-QIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTYNQLGCANNSQ 263
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
N + S L + + + + L+S G LY WG+ G G P R
Sbjct: 264 SSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGT---GFFG-----QFDRPTR 315
Query: 334 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+ F+ + + G + + EGK+ +WG
Sbjct: 316 CE--FAPKDLLDICIGNQFICLLDGEGKVYSWG 346
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 128/286 (44%), Gaps = 14/286 (4%)
Query: 86 LTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
L + VY G + +GQLG+ S G S R + + I+ G H+S I +G +
Sbjct: 30 LKDFTPVYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYV 89
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y G N+ GQLG+ + PT VE L G Q + G + V G++ +WG
Sbjct: 90 YSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQN 149
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G+ ++ TP+++ +L+ + G ++ I + +++ FGD
Sbjct: 150 CEGQLGIGKSDNMT---------TPQIV-DLKNNLAVFVSCGKRNTMVITQTQKIFGFGD 199
Query: 265 RAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L E N + L ++ + CG HT L GE ++ G+N LG
Sbjct: 200 GKCGQLGLGNECNEYKPRQLQIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTYNQLGCA 259
Query: 324 SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
+ + P +V+ + V ++ +AA+ SEG + WG G
Sbjct: 260 NNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTG 305
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G+LGLG+ + ++P + ++ A++CG HTLFL E G ++ G N + Q
Sbjct: 197 FGDGKCGQLGLGNECNEYKPRQL-QIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTYNQ 255
Query: 103 LGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N S P+++ K V I+ S+A++ +G LY+WG GQ
Sbjct: 256 LGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFFGQFDR--- 312
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
PT+ E +G + + G GKV SWG+ G LG G
Sbjct: 313 -------PTRCEFAPKDLL-DICIGNQFICLLDGEGKVYSWGSNMFGELGQG 356
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 163/350 (46%), Gaps = 39/350 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+GS E + + A + H ++++ G ++L + + G ++ G N
Sbjct: 10 WGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQRAT 69
Query: 103 LG-----ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQL- 155
LG SEN + P ++ L ++VQ + G H A+ G Y WG N GQ
Sbjct: 70 LGHPAETKSENKTENT-PSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 128
Query: 156 -------GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 129 EEPERKDGTGRPLRRDIEIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG------ 180
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G ++ S P ++ LE V++ A G H+ + E+G ++ +G+
Sbjct: 181 -----QPWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYG 231
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
++ + +P + L ++ GG+H+ LT GE+Y WG E+G LG G D
Sbjct: 232 QLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSD 291
Query: 327 VLHS--PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++VQ E V QVSCG H+ A++ +G + ++G G HG
Sbjct: 292 KSSKMVPQKVQLLAGEDIV-QVSCGGTHSVALTRDGHMFSFG-RGDHGRL 339
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 123/294 (41%), Gaps = 27/294 (9%)
Query: 92 VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ A G + GQLGI N + +L+P RI + G +S AI DG+L
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIR-------SVVAGSRNSLAIADDGKL 59
Query: 145 YMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ WG N LG K K P++V+ LS + QAA+G +AV G+ +W
Sbjct: 60 FTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAW 119
Query: 202 GAGGSGRLGHGQE--SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G G+ G E LR E R +L V+ AAG HS + G V
Sbjct: 120 GGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKL---VVRQVAAGGTHSVVLTREGHV 176
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+ +G + Q P + L + G +H L G L+ WG+NE G
Sbjct: 177 WTWGQPWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 232
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
LG G P RVQG + VD + GW TA EG++ WG G HG
Sbjct: 233 LGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWG-RGEHGRL 285
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G ++A G N++GQLG + S +P+R+ GL
Sbjct: 194 PVRVQGLE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPIRVQGL 250
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G +P KV+ L+G
Sbjct: 251 SDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIV 310
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G + S+G G GRLG+G++
Sbjct: 311 QVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRK 344
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ +L +A GG H+ LT+ G VY G + G+
Sbjct: 225 WGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGR 284
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ S + P ++ L +++VQ+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 285 LGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRK 344
Query: 161 AAKVIPIPTKVE 172
P+ ++
Sbjct: 345 VTTGQPMEVPID 356
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4067 WGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4126
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4127 LGHSDSED-QLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4184
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4185 -GSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4242 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4294
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4295 RPRLVAALQGKKVNRVACGSAHT 4317
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 149/305 (48%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2964 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3023
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3024 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3082
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L +++ A G HSA + +G +Y +G +
Sbjct: 3083 GH--------FSRMNCD-KPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3134 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3193
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3194 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3249
Query: 386 RGQLT 390
+ Q+
Sbjct: 3250 KPQVV 3254
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 148/321 (46%), Gaps = 23/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3020 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3078
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I L+ K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3079 DGKLGHFSRMNCD-KPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3137
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3138 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3192
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3193 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3246
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3247 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3306
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
QG + +V+CG H+ A
Sbjct: 3307 QG-LEGQKITRVACGSSHSVA 3326
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3074 WGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3134 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3191
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3192 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3248
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3249 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3297
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3298 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3329
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ ++V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLEVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 131/291 (45%), Gaps = 18/291 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG P + L+ EVV ++ G
Sbjct: 4047 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-RPRVVESLRGIEVVDVAAGGA 4105
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+ +T G+LY WGK G+LG ++ P VE L G A G Q++
Sbjct: 4106 HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEVLQGHRVVDVACGSGDAQTLC 4163
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMKIESLTGLGVVKVECGSQFSV 4214
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4274
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
YTWG N+ G LG G+ + + P R+ V++V+CG HT A S K
Sbjct: 4275 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4324
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 145/318 (45%), Gaps = 39/318 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 I----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
A G S A+T G++ +WG G GRLGHG S E P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
E +V CG + LT G++Y+WG +N LG G+ + + P ++G + +D V+
Sbjct: 659 EVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVID-VAA 717
Query: 349 GWKHTAAISE-GKILTWG 365
G H A++E ++ +WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4019 GRLGIGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L GI A G S VT G + +WG G GRLGH
Sbjct: 4077 HGSRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4132 ------SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4186 SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4246 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 25/350 (7%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTET 89
SS R +WG D +LG G S+ + P ++ +A GG+ +LF +T
Sbjct: 2956 SSAAVRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVE 3013
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G VYA G G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG+ +G+LG + P +E L + A G S A+T G++ +WG G
Sbjct: 3074 WGEGDDGKLGHFSRMN--CDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEY 3131
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
GRLGHG +T++ P+++K L G +V A G + + + G V+ +GD
Sbjct: 3132 GRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
K+ P I +L ++ CG + LT G ++TWG + LG
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
GS + P+ V+G + V+ G H A+++ G++ WG HG
Sbjct: 3243 GSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHG 3290
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ PRL++ L G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 117/246 (47%), Gaps = 20/246 (8%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G S+A+ ++++WG N QLG G K +K I +P+ E LS + Q A G +
Sbjct: 2951 SAGLESSAAVRT--KVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKS 3006
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
AVT GKV + G +GRLG G L S + PR I L VK A +G
Sbjct: 3007 LFAVTVEGKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSG 3058
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT 304
H+ + +G+V+ +G+ K+ + +P LI L ++ CG H+ LT
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT 3118
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKI 361
S GELYTWG E G LG G P+ V+ V QV+CG + A EG +
Sbjct: 3119 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLV 3177
Query: 362 LTWGWG 367
+WG G
Sbjct: 3178 FSWGDG 3183
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 4015 YGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G++V AAG HSAC+ G +Y +G
Sbjct: 4075 LGHGSRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4126 RLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P +++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4186 SDGCKVPMKIES-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4240
Query: 384 LDR 386
+ R
Sbjct: 4241 VRR 4243
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG + + + + T R ++ + G + A +
Sbjct: 3954 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4004
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G++Y G A ++ P+L+ + + V GG H L+S GE+
Sbjct: 4005 TADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4064
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
Y+WG E+G LG GS P V+ VD V+ G H+A ++ G + TWG
Sbjct: 4065 YSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVD-VAAGGAHSACVTAAGDLYTWG--- 4120
Query: 369 SHGTFSEDGHSSGGQLDRGQLTP 391
G + GHS QL P
Sbjct: 4121 -KGRYGRLGHSDS----EDQLKP 4138
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP----VDQVSCGWKH 352
G+H L + GE+++WG + G LG G L P +V FS V ++CG +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEP-KVISAFSGKQGGKHVVHIACGSTY 563
Query: 353 TAAIS-EGKILTWGWGG----SHGTFSED 376
+AAI+ EG++ TWG G HG+ SED
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4277 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPAALPGLDTKHIVGIACGPAQSFA 776
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++ P + L+ G G H + T G VY G N + QLG +
Sbjct: 52 GCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
SL P +IS + K+V +++ G HHS +T DGE+Y WG N++GQ+G G A + I
Sbjct: 111 TTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAI 170
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 171 PRRV-TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGN---------SGN 220
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
+ TP I L+G++V+ A G+ H+ + + G++Y +G + ++ GN + + P
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQL--GTGNRSNQSYPVP 278
Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G ++Y WG
Sbjct: 279 ITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 21/322 (6%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++TE V+A G N G LG+ + S+E
Sbjct: 6 KWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQN-SVE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G ++P
Sbjct: 65 PRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
++ T + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 LVNKKVT-EVACGSHHSMILTSDGEVYTWGYNNSGQVGSGS---------TANQAIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
K+ + A G + S + ENG VY++G ++ + P I+ L
Sbjct: 175 TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P + + ++ +C
Sbjct: 235 VQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPITVD-KDRVIEIAACH 293
Query: 350 WKHTAAISEGKILTWGWGGSHG 371
HT+A + WG G
Sbjct: 294 SAHTSAAKTQGSQVYMWGQCRG 315
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P+ I+ K V++I+ + H S+A T ++YMWG+ GQ
Sbjct: 264 QLGTGNRSNQSY-PVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 --SITLPYLTHFACTDDVF 333
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 136/265 (51%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3139 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3198
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T DG ++ WG G+LG G
Sbjct: 3199 LGHGDNC-TQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG- 3256
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3257 -GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV-- 3313
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P I+ L G KV A G LH + ++G+VY +GD D GN
Sbjct: 3314 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTIV 3364
Query: 279 -RRPSLISKLP--YSEEVVCGGYHT 300
++PSL+ L + V CG H+
Sbjct: 3365 NKKPSLVLGLDGIFVNRVACGSSHS 3389
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 142/319 (44%), Gaps = 20/319 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 3086 GEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3145
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3146 KLGHGNRLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3204
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L Q A G Q++ +T G V SWG G G+LG G
Sbjct: 3205 CTQLKP--KLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGG----- 3257
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P + L GV V G S + + G V+ +G ++ H
Sbjct: 3258 ----SEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV 3313
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
R+P+ I L + V G H +T G++Y WG N++G G G+ V P V G
Sbjct: 3314 RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLG 3373
Query: 337 PFSESPVDQVSCGWKHTAA 355
V++V+CG H+ A
Sbjct: 3374 -LDGIFVNRVACGSSHSVA 3391
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 162/334 (48%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 4094 WGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4151
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + +E L+ +KK V +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4152 GRLGVGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4210 HGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD--- 4264
Query: 217 ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4265 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4318
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG G+ D + P+
Sbjct: 4319 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4378
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+V + ++ G H A S+ G++ TWG
Sbjct: 4379 KVAA-LQGKKIISIATGSLHCVACSDAGEVFTWG 4411
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 138/309 (44%), Gaps = 22/309 (7%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+S P + + + +K +A GG H L L+ G V++ G + G+LG Y
Sbjct: 4160 DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP 4219
Query: 115 PL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L +SG+ VV I+ G HS+ IT+ G + WGK G+LG G ++ P VE
Sbjct: 4220 KLIESLSGIG--VVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVE 4275
Query: 173 CLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4276 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPM 4326
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
I+ L G+ V G S + +G VY +G ++ +H RRP ++ L
Sbjct: 4327 KIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4386
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+ + G H + GE++TWG N+ G LG G++ + P VQ + +V C
Sbjct: 4387 KIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQS-LQGKHIVKVIC 4445
Query: 349 GWKHTAAIS 357
G HT A+S
Sbjct: 4446 GSAHTLALS 4454
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 164/341 (48%), Gaps = 28/341 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 3032 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3088
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 3089 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3147
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3148 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3203
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
+ ++ P+L+ L+ +V A G + C+ E+G V+ +GD K+
Sbjct: 3204 -------NCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG 3256
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
P + +L ++ CG + LT GE++TWG + LG G+ + P
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKP 3316
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+QG V V+ G H A+++ G++ WG HG
Sbjct: 3317 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWG-DNDHG 3355
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + + + +ACG AH+ +T G V G +G+
Sbjct: 4200 WGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGR 4259
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4260 LGHGDSED-QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4317
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4318 -GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV-- 4374
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4375 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQ 4427
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L+ L + +V+CG HT L++
Sbjct: 4428 RPRLVQSLQGKHIVKVICGSAHTLALST 4455
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 90 GCVYATGLNDFGQ-LGISENIGYSLE--PLRISGLKKEVVQISTGYH--HSSAITVDGEL 144
CVY L D G L +S I + + P ++ GL+ +VQ++ H A+ G++
Sbjct: 573 NCVYI--LTDSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDV 630
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG G+LG G +AK +PT++ L+ G S A+T G++ +WG G
Sbjct: 631 YSWGSGDGGRLGHGDTSAK--ELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRG 688
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIF 262
GRLGHG S +Y P L+ L+ +V A G HS C+ E G + +
Sbjct: 689 TYGRLGHGN---------SEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
GD K+ + P + LP + VV G + LT G +YTWG G
Sbjct: 740 GDGDFGKLGNESCVGTSVPVQVD-LPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGR 798
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
LG G+ + P+ VQ + VD ++ G H A++ L +GWG
Sbjct: 799 LGHGNSEHSPVPKMVQALEGKKIVD-LAVGLAHCLALTASGEL-YGWG 844
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 19/252 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL- 184
+QI+ G A+T DG+LY G + G+ LG + PT VE L + K+ A+
Sbjct: 4125 IQIAGGEQTLYAVTPDGKLYATGYGAGGR--LGVGGTDSVTTPTLVESLQHVMIKKVAVN 4182
Query: 185 -GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + +A++ G+V SWG G G+LGHG S + R P+LI+ L G+ V
Sbjct: 4183 SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDS---YDR------PKLIESLSGIGVVDI 4233
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YH 299
A G HSACI G V +G ++ + +P L+ L + ++ CG
Sbjct: 4234 ACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQ 4293
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
T +T +++WG + G LG G D P +++ + V +V CG + + A++
Sbjct: 4294 TLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIES-LAGLGVTKVECGSQFSVALTRS 4352
Query: 359 GKILTWGWGGSH 370
G + TWG G H
Sbjct: 4353 GSVYTWGKGDYH 4364
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 21/227 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++ P +A + + CG +++ +T +G +Y G +G+
Sbjct: 633 WGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGR 692
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N P ++ LK VV ++ G HS +T G + WG G+LG
Sbjct: 693 LG-HGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNES 751
Query: 160 KAAKVIPIPT---KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+P+ + C+ +F+ G + SVA+T G V +WG G GRLGHG
Sbjct: 752 CVGTSVPVQVDLPQASCVVKVFS-----GSQFSVALTREGTVYTWGKGHGGRLGHGN--- 803
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S P++++ LEG K+ A G H + +G +Y +G
Sbjct: 804 ------SEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 17/247 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
A C G H L L +G VY+ G D G+LG + L P RI+ L ++V + G
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKEL-PTRIAALADRQVTGVFCGSS 671
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
+S+AIT GELY WG+ + G+LG G K +PT V L ALG S+
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKY--VPTLVTALKAHRVVHVALGCGDAHSLC 729
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G +WG G G+LG+ ES + P + + V +G S
Sbjct: 730 VTEAGLAFAWGDGDFGKLGN--ESCV-------GTSVPVQVDLPQASCVVKVFSGSQFSV 780
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ G VY +G ++ H+ P ++ L + ++ G H LT+ GEL
Sbjct: 781 ALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGEL 840
Query: 310 YTWGSNE 316
Y WG N+
Sbjct: 841 YGWGRND 847
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 21/256 (8%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
V ++ +WG N QLG G K +KV +PT LS + A G + V+ GK+
Sbjct: 3026 VSSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3083
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENG 257
+ G G +GRLG G +++ TP+ + L VK A +G H+ + +G
Sbjct: 3084 ACGEGTNGRLGLGHNNNV---------PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3134
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
+V+ +G+ K+ +P LI L ++ CG H+ +TS GELYTWG
Sbjct: 3135 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3194
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWG--GSH 370
E G LG G P+ V + V QV+CG + + +G + +WG G G
Sbjct: 3195 EYGRLGHGDNCTQLKPKLVTA-LQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKL 3253
Query: 371 GTFSEDGHSSGGQLDR 386
G +G S Q+DR
Sbjct: 3254 GRGGSEGCSIPHQVDR 3269
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG+GD+G+LG S PV + + + G ++ LT G VY G
Sbjct: 735 LAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG N +S P + L+ K++V ++ G H A+T GELY WG+N Q +
Sbjct: 795 HGGRLG-HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQ--I 851
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PI T + I T L A G + L W S HG + I
Sbjct: 852 CPECVTRDPIIT-----APILTTPPTLRVAGMAA--GVAQSLFWCHSSS----HGIPAKI 900
Query: 218 LGFLRSTSEYTPRLIKEL 235
F+ SE+T RL+ +L
Sbjct: 901 -PFVVDLSEHTFRLLDQL 917
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
C G H L S G++Y+WGS + G LG G P R+ ++ V V CG ++A
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAA-LADRQVTGVFCGSSYSA 674
Query: 355 AIS-EGKILTWGWGGSHGTFSEDGH 378
AI+ G++ TWG GT+ GH
Sbjct: 675 AITASGELYTWG----RGTYGRLGH 695
>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 438
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 141/292 (48%), Gaps = 20/292 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG G+ P + +++A+A G +H L L G V+A G N+ GQ
Sbjct: 114 WGWNEYGQLGDGTTMDHNTPGMVGGLG--NVRAVAVGISHMLALGNDGTVWAWGKNNCGQ 171
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N+ S+ P+R+SGL + +V IS GY+H+ AI G ++ WG N GQLG G +
Sbjct: 172 LGDGTNVD-SMTPVRVSGLPR-IVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNIS 229
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P KV+ L+ + A G S+A+ G + +WG+ G LG G
Sbjct: 230 S--PNPKKVKGLANV--TAVAGGSSFSLALKDDGTIWAWGSNVQGELGVG---------- 275
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T++ P +K V AAG SA I +G ++++G K + G A P
Sbjct: 276 -TTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNEQGKYI-SGGEDASSPR 333
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
S L + V G + L + G L+ G N+ G LG G+ + P RV
Sbjct: 334 RASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARV 385
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 23/304 (7%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C+A + S+ +A G ++ L + G V+ G + G LG E++ P R+
Sbjct: 34 VRCAA-SQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGY-ESVQDQYVPKRVP--I 89
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V + + + +A+ DG ++ WG N GQLG G P V L + +
Sbjct: 90 YNVTSVDSCFASVAALKDDGTVWTWGWNEYGQLGDGTTMDH--NTPGMVGGLGNV--RAV 145
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A+G +A+ G V +WG G+LG G + +R + PR++
Sbjct: 146 AVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSG--LPRIVA--------- 194
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
+AG+ H+ ID+ G V+ +G ++ + P + L V G +
Sbjct: 195 ISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGLANVTAVAGGSSFSLA 254
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
L G ++ WGSN G LG+G+ P +VQG + V +++ G + +AAI+ +G +
Sbjct: 255 LKDDGTIWAWGSNVQGELGVGTTKDCPLPVKVQG---LTNVIRIAAGGETSAAITNDGSL 311
Query: 362 LTWG 365
WG
Sbjct: 312 WVWG 315
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPT 169
++ +R + + VV ++ G+ S A+ +G ++ WG + +G LG + +P +P
Sbjct: 30 AMAGVRCAASQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRVPI 89
Query: 170 -KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
V + F AAL + G V +WG G+LG G + T
Sbjct: 90 YNVTSVDSCFASVAALKDD--------GTVWTWGWNEYGQLGDGT---------TMDHNT 132
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P ++ L V+ A G H + +G V+ +G ++ + P +S LP
Sbjct: 133 PGMVGGLG--NVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP 190
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+ G H + G ++TWG N+ G LG G+ +P++V+G + V V+
Sbjct: 191 RIVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKG---LANVTAVAG 247
Query: 349 GWKHTAAI-SEGKILTWG 365
G + A+ +G I WG
Sbjct: 248 GSSFSLALKDDGTIWAWG 265
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 152/337 (45%), Gaps = 36/337 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG RLG G P + A +++ +ACG H+ +T +G +Y G ++
Sbjct: 316 WGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNS 375
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + P ++SG + V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 376 GLLGHGSEASHWI-PKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHG 434
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
++ + IP +VE L G T + A G + AV GK+ +WG
Sbjct: 435 DHSS--MSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGD 492
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG + L P+ + L A G S + +GRVY G
Sbjct: 493 GDKGRLGHGDKEPRL---------VPQSVTALINESFCQVACGHNLSVALTTSGRVYTMG 543
Query: 264 DRAVDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
AV L + P+L+ K+ S EEV CG YH VLTS E+YTWG NG L
Sbjct: 544 S-AVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQL 602
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
G G D ++P V + V V CG TAAIS
Sbjct: 603 GHGDNDHRNTPTLVDF-LKDKQVKNVVCGLNFTAAIS 638
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 154/320 (48%), Gaps = 41/320 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQIST 130
+ ++ACGG H + +T+ G V++ G +LG + S L + G+ E+V +
Sbjct: 294 VHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELV--AC 351
Query: 131 GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFE 187
G +HS A+T+ G+LY WG +++G LG G +A+ IP KV + G+ A G
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHW--IPKKVSGPMEGMHVSYVACGPW 409
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ VT G++ ++G G G LGHG SS+ PR ++ L G + A G
Sbjct: 410 HTAVVTSAGQLFTFGDGTFGALGHGDHSSM---------SIPREVEALRGQRTMRVACGV 460
Query: 248 LHSACIDE---------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS 290
H+A + E +G+++ +GD DK G+ R P ++ L
Sbjct: 461 WHTAAVVELMIASSSFESSGSSSSGKLFTWGDG--DKGRLGHGDKEPRLVPQSVTALINE 518
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+V CG + LT+ G +YT GS G LG D P V+G + S V++V+C
Sbjct: 519 SFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADG-KIPTLVEGKIANSFVEEVAC 577
Query: 349 GWKHTAAI-SEGKILTWGWG 367
G H A + S+ ++ TWG G
Sbjct: 578 GSYHVAVLTSKTEVYTWGKG 597
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 39/255 (15%)
Query: 142 GELYMWGKN-SNGQLGLG------KKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ +G +G G + K+ + P +E + A G + +V VT
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVT 308
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG RLGHG E + P+LI L G+ +++ A G HS +
Sbjct: 309 KKGEVFSWGEECGSRLGHGVEVDV---------SHPKLIDALCGMNIELVACGEYHSCAV 359
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSGGE 308
+G +Y +GD + L G+ A P +S + + V CG +HT V+TS G+
Sbjct: 360 TLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQ 419
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
L+T+G G LG G + P V+ + + +V+CG HTAA+ E
Sbjct: 420 LFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTM-RVACGVWHTAAVVELMIASSSFES 478
Query: 359 ------GKILTWGWG 367
GK+ TWG G
Sbjct: 479 SGSSSSGKLFTWGDG 493
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 196 GKVLSWGAG--------GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
G V WG G G R+G + I L P+ ++ + V A G
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALL-------PKALESTVVLDVHSIACGG 301
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
H+ + + G V+ +G+ ++ P LI L E V CG YH+C +T
Sbjct: 302 KHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTL 361
Query: 306 GGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
G+LYTWG ++ +G LG GS P++V GP V V+CG HTA + S G++
Sbjct: 362 SGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLF 421
Query: 363 TWGWGGSHGTFSEDGHSS 380
T+G G+ G HSS
Sbjct: 422 TFG-DGTFGALGHGDHSS 438
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 334 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 393
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 394 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 451
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 452 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 508
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 509 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 561
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 562 RPRLVAALQGKKVNRVACGSAHT 584
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 294 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 352
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 353 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 410
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 411 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 461
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 462 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 521
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 522 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 580
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 581 SAHTLAWSTSK 591
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 228 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLI-GGEQTLFAVTADGKLYATGYGAGG 286
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 287 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 344
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 345 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 398
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 399 -----SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 453
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 454 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 513
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V ++ G H +E G++ TWG
Sbjct: 514 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 545
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 223 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 281
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 282 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 341
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 342 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 392
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 393 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 452
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 453 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 507
Query: 384 LDR 386
+ R
Sbjct: 508 VRR 510
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 492 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 551
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 552 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 586
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 132/261 (50%), Gaps = 25/261 (9%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++VV +S G++H +A+T +G +Y WG+N +G+LG G K+ P +V K+
Sbjct: 875 RQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEV 934
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G E ++A T G V WG G G+LG G T + P IK L + V
Sbjct: 935 VCGGEHTLARTESGSVYGWGNGRIGQLGLGDR---------TLHWLPVPIKTLRKMHVTQ 985
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGY 298
AAG+ H+ + ++G V +FG V ++ G R+ P+ + +P + CG
Sbjct: 986 LAAGYAHTIVVLKSGEVMVFGGGEVGQL----GTGMRKDLLVPTKLQAMPSIVQAACGYC 1041
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESPVDQVSCGWKHTA 354
HT +LT GE+YT GS +G L G D L +P+ V+G + + ++CG HT
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQL--GHADNLQNDRLAPKMVEG-LNGKRIRFIACGSFHTI 1098
Query: 355 AISEGKILTWGWGGSHGTFSE 375
AI++ + + WGG GT S+
Sbjct: 1099 AITDLDNV-YTWGGVQGTDSD 1118
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G LG G + P F+ +K + CGG HTL TE+G VY G
Sbjct: 899 WGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRI 958
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + + L P+ I L+K V Q++ GY H+ + GE+ ++G GQLG G
Sbjct: 959 GQLGLGDRTLHWL-PVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGM 1017
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ K + +PTK++ + I QAA G+ + +T G+V + G+ SG+LGH
Sbjct: 1018 R--KDLLVPTKLQAMPSIV--QAACGYCHTALLTEAGEVYTCGSAMSGQLGHADN----- 1068
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGN 276
P++++ L G +++ A G H+ I + VY +G D + QE
Sbjct: 1069 --LQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERK 1126
Query: 277 HA--RR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
A +R PS++ L V CG H+ T GE+Y W S
Sbjct: 1127 AAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSST 1171
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 137/303 (45%), Gaps = 29/303 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG G+LGLG W PV K + LA G AHT+ + ++G V G + GQ
Sbjct: 953 WGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQ 1012
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P ++ + +VQ + GY H++ +T GE+Y G +GQLG
Sbjct: 1013 LGTGMRKDL-LVPTKLQAMPS-IVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQ 1070
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW----GAGGSGRLGHGQESSIL 218
P VE L+G + A G ++A+T V +W G G + ++++IL
Sbjct: 1071 NDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAIL 1130
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-AVDKMLFQEGN- 276
TP ++K L G ++ + + G HS +G VY++ ++ L G+
Sbjct: 1131 ------KRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSG 1184
Query: 277 ------HARRPSLISKLP-----YSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
P L+S +P S+ VV G T V+T G LY+WGS G LG
Sbjct: 1185 LSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLG 1244
Query: 322 IGS 324
+G
Sbjct: 1245 LGD 1247
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 146/319 (45%), Gaps = 50/319 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVV-QISTGYH 133
++CG H LTE G VY G N G+LG + G L P ++ K + V ++ G
Sbjct: 880 VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGE 939
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A T G +Y WG GQLGLG + +P+P K L + Q A G+ ++ V
Sbjct: 940 HTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKT--LRKMHVTQLAAGYAHTIVVL 997
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V+ +G G G+LG G +L + + + P +++ AA G+ H+A +
Sbjct: 998 KSGEVMVFGGGEVGQLGTGMRKDLL--VPTKLQAMPSIVQ---------AACGYCHTALL 1046
Query: 254 DENGRVYIFG---------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
E G VY G DR KM+ EG + +R I+ CG +
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMV--EGLNGKRIRFIA---------CGSF 1095
Query: 299 HTCVLTSGGELYTW----GSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
HT +T +YTW G++ +G + +I +P V+G + + VSCG
Sbjct: 1096 HTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR-ISLVSCGHA 1154
Query: 352 HTAAIS-EGKILTWGWGGS 369
H+ A + +G++ W GS
Sbjct: 1155 HSVATTMDGEVYVWSSTGS 1173
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 38/296 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYATGLN 98
WG + G LGLG+ ++ P A + + ++ACGG H+ +TE G VY G
Sbjct: 3 WGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSG 62
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG ++ L L + +V+++ G H+ ++ G ++ WG GQLG+G
Sbjct: 63 KSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVG 122
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P+ +V L G+ + A G + VT G V +WG G +G+LGHG ++
Sbjct: 123 STHNSNDPV--QVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDA--- 177
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE---- 274
S+ P +K+L G+ V A G H+ + E DRAV + E
Sbjct: 178 ------SQSRPMYVKKLHGIYVSTLACGLAHTVVVSEV-------DRAVFSWGWDEYGQL 224
Query: 275 ---------GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
GN R P I L +++ CG +T L+S G++Y +G ++G LG
Sbjct: 225 GHGGWDIFGGNKNRSPRPIKDL---QQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG----FEQSVAVTGGGKVLS 200
+ WG N++G LGLG A P P + L G+ A G + S AVT G+V +
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCP--IIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG+G SG+LGHG +++ PRLI L+ + A G H+ + + G V+
Sbjct: 59 WGSGKSGQLGHGDSQNLV---------LPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVF 109
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G ++ +++ P ++ L + +V CG HT V+T G +YTWG NG
Sbjct: 110 AWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNG 169
Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWGW 366
LG G P V+ V ++CG HT +SE + +WGW
Sbjct: 170 QLGHGDDASQSRPMYVK-KLHGIYVSTLACGLAHTVVVSEVDRAVFSWGW 218
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG----FLHSACID 254
SWG G LG G ++ +P I L+G+ V A G HSA +
Sbjct: 1 FSWGFNNDGALGLGTTDAV---------GSPCPIIALQGLLVVSVACGGGSEEQHSAAVT 51
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
E G+VY +G ++ + + P LI L + EV CG HT V++ G ++ W
Sbjct: 52 EQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAW 111
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
G G LG+GS + P +V V +V+CG HTA ++E G + TWGWG
Sbjct: 112 GWGHFGQLGVGSTHNSNDPVQVT-SLDGVKVCKVACGSAHTAVVTESGHVYTWGWG 166
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 19/294 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIV 117
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 176
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + L+ V A G + + +
Sbjct: 177 EVFAWGYNNSGQVGSGS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD 227
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
G VY++G ++ + P ++ L + V CG HT VLT G++Y WG
Sbjct: 228 TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
+N G LG G+ P V + ++ +C HT+A G + WG
Sbjct: 288 ANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G V+ +G A ++ N
Sbjct: 85 LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 142
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS +++V+ CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 143 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 202
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
V G V ++CG A+ + G++ WG+ G+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 239
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 29/323 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G + + + + ++G+ ++G+LGLGS +P A +
Sbjct: 28 SKFWFKNDIPMYLSCGDEHTAVVTGNNKLY--MFGSNNWGQLGLGSKSDVKKPTCVKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQ 127
++ ACG HTL LT G VYA G N+ GQLG+ + + RIS E + Q
Sbjct: 86 PEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTF-HRISFFTSEHNIKQ 144
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G + S+A++ DG L+MWG NS GQ+GL + +P + G + G+
Sbjct: 145 LSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNI----GKPISWISCGYY 200
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S VT G++ ++G SG+LG +E I + TP+L+ + +++A G
Sbjct: 201 HSAFVTMDGELYTFGEPESGKLGLPKELLI-------NHRTPQLVAGIPEKVIQVACGGG 253
Query: 248 LHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
H+ + E VY FG + F+ P +I ++ + + CG HT
Sbjct: 254 -HTVVLTEKA-VYTFGLGQFGQLGLGTFCFE----TLEPKVIEQIKNQKITYISCGENHT 307
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
+++ G +YT+G +G LG+G
Sbjct: 308 ALISDIGLMYTFGDGRHGKLGLG 330
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 146/307 (47%), Gaps = 32/307 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ +P + LK E VQ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVK-KPTCVKALKPEKVQFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ +TV G +Y G N+ GQLGLG + +S FT KQ + G S
Sbjct: 99 TLILTVVGNVYAAGGNNEGQLGLGDTEER-----NTFHRIS-FFTSEHNIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A++ G++ WG G++G S+ P + G + + G+ H
Sbjct: 153 AALSEDGRLFMWGDNSEGQIGLNDVISVC---------VPHQVNI--GKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + +G +Y FG+ K+ L +E NH R P L++ +P +V CGG HT VLT
Sbjct: 202 SAFVTMDGELYTFGEPESGKLGLPKELLINH-RTPQLVAGIPEKVIQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
+YT+G + G LG+G+ +V + +SCG HTA IS+ G + T+
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTF 319
Query: 365 GWGGSHG 371
G G HG
Sbjct: 320 G-DGRHG 325
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F + +++ +ACGG TL + G NDF
Sbjct: 319 FGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGCQTLVFAAPR-IDVVGENDF 377
Query: 101 GQLG 104
Q+
Sbjct: 378 NQIN 381
>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1271
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 161/359 (44%), Gaps = 49/359 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ G++G S R PV +A ++ + +A G +L + G +YA G N
Sbjct: 228 WGDNSSGQVGDNSTTLRQTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNN 287
Query: 99 DFGQL--GISENIGYSLEPLRI---SGLKKEV--VQISTGYHHSSAITVDGELYMWGKNS 151
GQL G +EN L P+++ +G+ E Q+S + H+ A+ + LY WG N
Sbjct: 288 TRGQLGDGTTEN---KLTPVKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNG 344
Query: 152 NGQLGL------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
GQLG A P V +G+ Q + G S+A+ ++ +WG
Sbjct: 345 YGQLGNTSVPTGSDNPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNT 404
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
SGRLG G + +TP +++ GV +AG I NG +Y +G
Sbjct: 405 SGRLGDGTD---------IQRFTPVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWN 455
Query: 266 AVDKMLFQEGNHA---RRPSLISKLPYSE------EVVCGGYHTCVLTSGGELYTWGSNE 316
++ +G++A R P+LIS + V+ H + S G LY+WG NE
Sbjct: 456 GYGRL--GDGSNAEDRRTPTLISPPDGASAGFTWARVMVRDDHVLAIGSDGNLYSWGLNE 513
Query: 317 NGCLGIGSIDV----LHSPERVQGPFSESPVD----QVSCGWKHTAAI-SEGKILTWGW 366
G LGI I+ + P V S + Q++ GW+ ++A+ S+G + TWGW
Sbjct: 514 YGQLGIKDINTDGSYISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGNLYTWGW 572
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 151/351 (43%), Gaps = 32/351 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ R PV + + ++ G +L L G V+A GLN G
Sbjct: 785 WGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSG 844
Query: 102 QLG---ISEN--IGYSLEPLRI---SGLKKE---VVQISTGYHHSSAITVDGELYMWGKN 150
QLG I+ N YS P+R+ SG+ + IS G H A+ G + WG N
Sbjct: 845 QLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSN 904
Query: 151 SNGQLGLGKKAAKVIPI---PTKVECLSGIFT----KQAALGFEQSVAVTGGGKVLSWGA 203
G+LG+ I P +V G T Q + G S+A G+ WG+
Sbjct: 905 EFGKLGVPASTVATTGITTRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGS 964
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+G LG+ + ++ G+ + + P G AG HS +D+ GR++ +G
Sbjct: 965 NQNGALGNTSDVALNGYTTTPVQAKPG-TNPSGGFNPAQIIAGSGHSLALDDLGRIWSWG 1023
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEV--------VCGGYHTCVLTSGGELYTWGSN 315
+ ++ + PS+++ +P + V G ++ L G ++ WG N
Sbjct: 1024 GNSNGELGLGDTTTRTAPSMVA-MPANVSTFTQLTGSRVSG--NSLALDQNGNIWGWGQN 1080
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
+G LG G L+ P ++ P +V G HT A+ S+G L WG
Sbjct: 1081 SSGMLGTGGTGSLNRPTKMSNPSGIDHFVKVCAGTGHTLAVASDGSTLGWG 1131
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 120/277 (43%), Gaps = 35/277 (12%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT-K 170
+L P G+K QI++G HS A+ DG LY WG NS+GQ+G + P+ T K
Sbjct: 195 TLTPPATRGIK--FSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNK 252
Query: 171 VECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
S FT A G S+A+ G + +WG G+LG G + L TP
Sbjct: 253 PANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKL---------TP 303
Query: 230 RLIKELEGVKVKIA----AAGFLHSACIDENGRVYIF--------GDRAVDKMLFQEGNH 277
+ + GV + +A + H+ + N +Y + G+ +V +
Sbjct: 304 VKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSDNPAAY 363
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
+ +P L+S ++ G YH+ L S +LY WG N +G LG G+ +P V+
Sbjct: 364 SSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVR 423
Query: 336 GP----FSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
P FS+ SC A + G + WGW G
Sbjct: 424 QPAGVTFSQFSAGDTSC----FAISTNGDLYAWGWNG 456
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 34/290 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEPLRISGLKKEVV- 126
+L ++ G H L + G + G N+FG+LG+ + G + P++++ + E
Sbjct: 878 TLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQGETTG 937
Query: 127 ----QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA----KVIPIPTK--VECLSG 176
Q+S G HS A G + WG N NG LG A P+ K G
Sbjct: 938 FHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGG 997
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-----SILGFLRSTSEYTPRL 231
Q G S+A+ G++ SWG +G LG G + S++ + S +T
Sbjct: 998 FNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFT--- 1054
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LP 288
+L G +V +S +D+NG ++ +G + + RP+ +S +
Sbjct: 1055 --QLTGSRVS------GNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRPTKMSNPSGID 1106
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
+ +V G HT + S G WG N G LG + + ++SP V PF
Sbjct: 1107 HFVKVCAGTGHTLAVASDGSTLGWGDNSQGRLGNNATETVYSPVSVLFPF 1156
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 131/305 (42%), Gaps = 49/305 (16%)
Query: 101 GQLGISENIG-------YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
GQ IS N G +L P G++ Q+S G HS A+ DG +Y WG N G
Sbjct: 734 GQWTISPNQGPDSGQTKVTLVPPAARGIR--FSQVSAGDDHSLALGSDGNVYSWGANKYG 791
Query: 154 QLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
QLG G ++ P+ PT V + + A GF S+A+ G G V +WG SG+L
Sbjct: 792 QLGDGTATDRLTPVQIPKPTGVNRFTQV---SAGTGF--SLALDGQGHVWAWGLNSSGQL 846
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-----AAAGFLHSACIDENGRVYIFGD 264
G ++I S +P ++ G+ +AG H +D GR + +G
Sbjct: 847 G---SNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGS 903
Query: 265 RAVDKMLFQEGNHA-----RRPSLISKLPYSE-------EVVCGGYHTCVLTSGGELYTW 312
K+ A RP ++ P E +V GG H+ + G + W
Sbjct: 904 NEFGKLGVPASTVATTGITTRPVQVAT-PQGETTGFHYAQVSAGGSHSLATDTQGRAWGW 962
Query: 313 GSNENGCLGIGSIDVL--HSPERVQGPFSESP-----VDQVSCGWKHTAAISE-GKILTW 364
GSN+NG LG S L ++ VQ +P Q+ G H+ A+ + G+I W
Sbjct: 963 GSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRI--W 1020
Query: 365 GWGGS 369
WGG+
Sbjct: 1021 SWGGN 1025
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 138/338 (40%), Gaps = 45/338 (13%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---S 119
+V A ++ G H+L L G VY+ G N +GQLG L P++I +
Sbjct: 753 LVPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDR-LTPVQIPKPT 811
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAKVIPIPTKVEC 173
G+ + Q+S G S A+ G ++ WG NS+GQLG G A PI +V+
Sbjct: 812 GVNR-FTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPI--RVQA 868
Query: 174 LSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
SG+ L G +AV G G+ WG+ G+LG + +T+ T
Sbjct: 869 PSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLG------VPASTVATTGIT 922
Query: 229 PRLIK------ELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------RAVDKML--FQ 273
R ++ E G +AG HS D GR + +G D L +
Sbjct: 923 TRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYT 982
Query: 274 EGNHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+P ++ +++ G H+ L G +++WG N NG LG+G +P
Sbjct: 983 TTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPS 1042
Query: 333 RVQGPFSESPVDQVS---CGWKHTAAISEGKILTWGWG 367
V P + S Q++ A G I WGWG
Sbjct: 1043 MVAMPANVSTFTQLTGSRVSGNSLALDQNGNI--WGWG 1078
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 30/254 (11%)
Query: 43 WGNGDYGRLGL-----GSLESRWRPVVCSAFEKHSL----KALACGGAHTLFLTETGCVY 93
WG+ ++G+LG+ + RPV + + + ++ GG+H+L G +
Sbjct: 901 WGSNEFGKLGVPASTVATTGITTRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAW 960
Query: 94 ATGLNDFGQLGISENI---GYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELY 145
G N G LG + ++ GY+ P++ QI G HS A+ G ++
Sbjct: 961 GWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIW 1020
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAG 204
WG NSNG+LGLG + P + FT+ S+A+ G + WG
Sbjct: 1021 SWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFTQLTGSRVSGNSLALDQNGNIWGWGQN 1080
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
SG LG G S+ R T P I VKV AG H+ + +G +GD
Sbjct: 1081 SSGMLGTGGTGSL---NRPTKMSNPSGIDHF--VKV---CAGTGHTLAVASDGSTLGWGD 1132
Query: 265 RAVDKMLFQEGNHA 278
+ ++ GN+A
Sbjct: 1133 NSQGRL----GNNA 1142
>gi|307190185|gb|EFN74300.1| X-linked retinitis pigmentosa GTPase regulator [Camponotus
floridanus]
Length = 807
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 163/329 (49%), Gaps = 28/329 (8%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ V S F K + A+ CG H+ + ++G ++ G ND+GQLG+ S +P
Sbjct: 67 SRFADNVASHFFIRKDPVVAIECGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHIS-KP 125
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPT 169
+ LK E V ++ G H+ T +++ G N GQLG +G ++ I I
Sbjct: 126 SCVKILKPEKVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSAIGDSSSSPILI-- 183
Query: 170 KVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+C L+G Q A G S+ +T G V++WG+ G+LG S ++ + T
Sbjct: 184 -YDCGLAGPRIVQIAAGSHHSMILTSDGGVVAWGSNLEGQLGLPGVSGLVN--KPTKVPI 240
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P +KE+ +AG+ HSA + E+G VY+ G+ K+ + +LP
Sbjct: 241 PEPVKEI--------SAGYYHSAFLTESGLVYVCGESESGKLGIDVNFSTQVAPKQMQLP 292
Query: 289 YSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQ 345
V CGG+HT VL +Y GSN +G LG+G+ ++ +H P+ + +G + +
Sbjct: 293 TPAIHVTCGGHHTLVLAENSNIYCSGSNASGQLGMGTNLNEIHMPKHLARGSLRNEKIVK 352
Query: 346 VSCGWKHTAAISE-GKILTWGWGGSHGTF 373
++CG H+A ++E GK+ T G G HG
Sbjct: 353 IACGESHSAILTELGKLFTCG-DGRHGKL 380
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 167/372 (44%), Gaps = 42/372 (11%)
Query: 2 LGRSLTA---MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
+GRS A + +++++D + + G + R F ++G+ D+G+LGLG
Sbjct: 64 IGRSRFADNVASHFFIRKDPVVAIECGDEHSAVICQSGRLF--VFGSNDWGQLGLGHKNH 121
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN--IG-YSLEP 115
+P + + +ACG AHTL T ++A G N GQLG EN IG S P
Sbjct: 122 ISKPSCVKILKPEKVTHVACGRAHTLICTGAQKIFACGSNQEGQLG-RENSAIGDSSSSP 180
Query: 116 LRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG------KKAAKVIP 166
+ I GL +VQI+ G HHS +T DG + WG N GQLGL K KV P
Sbjct: 181 ILIYDCGLAGPRIVQIAAGSHHSMILTSDGGVVAWGSNLEGQLGLPGVSGLVNKPTKV-P 239
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP V K+ + G+ S +T G V G SG+LG + F +++
Sbjct: 240 IPEPV--------KEISAGYYHSAFLTESGLVYVCGESESGKLGID-----VNF---STQ 283
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLIS 285
P+ + +L + + G H+ + EN +Y G A ++ + N P ++
Sbjct: 284 VAPKQM-QLPTPAIHVTCGGH-HTLVLAENSNIYCSGSNASGQLGMGTNLNEIHMPKHLA 341
Query: 286 KLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ E + CG H+ +LT G+L+T G +G LG+ + + E
Sbjct: 342 RGSLRNEKIVKIACGESHSAILTELGKLFTCGDGRHGKLGLEENENNVHEVTFAAKYQEL 401
Query: 342 PVDQVSCGWKHT 353
+ V+CG HT
Sbjct: 402 FITNVACGGCHT 413
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 132/291 (45%), Gaps = 18/291 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G +Y+ G + G+LG N P I L+ EVV I+ G
Sbjct: 2854 AVNSGGKHCLALSSEGELYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 2912
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GELY WGK G+LG G ++ P VE L G + G Q++
Sbjct: 2913 HSACITASGELYTWGKGRYGRLGHGDSEDQLKP--KLVEALQGHRVIDVACGSGDAQTLC 2970
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L G+ V G S
Sbjct: 2971 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKVPMKIDSLTGLGVVKVECGSQFSV 3021
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 3022 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 3081
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
YTWG N+ G LG G+ + + P R+ +++V+CG HT A S K
Sbjct: 3082 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 3131
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ SA + +K +A GG H + LT G V++ G D
Sbjct: 1826 GEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 1884
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 1885 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 1943
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1944 DNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGG--- 1998
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 1999 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 2052
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G+++ WG N++G G G+ V P V
Sbjct: 2053 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLV 2112
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILT 363
QG + +V+CG H+ A + + T
Sbjct: 2113 QG-LEGQKITRVACGSSHSVAWTTVDVTT 2140
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+T +G++Y G+ +
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 1829
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 1830 NGRLGLGLSSG-TIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 1888
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 1889 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939
Query: 270 MLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGS 1999
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 2000 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 2055
Query: 386 RGQLT 390
+ Q+
Sbjct: 2056 KPQMV 2060
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 1880 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG-- 1997
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 1998 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 2054
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + E G+V+ +GD Q+GN
Sbjct: 2055 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHG----QQGNGTTT 2104
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2105 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2135
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G +Y G +G+
Sbjct: 2874 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGR 2933
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 2934 LGHGDSED-QLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 2991
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2992 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3048
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3049 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3101
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3102 RPRLVAALQGKKINRVACGSAHT 3124
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +IS L VV+ + +G H
Sbjct: 1808 GGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRH 1867
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1868 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1925
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 1926 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLA 1976
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2036
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A++E G++ WG
Sbjct: 2037 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWG-DND 2094
Query: 370 HG 371
HG
Sbjct: 2095 HG 2096
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 145/297 (48%), Gaps = 24/297 (8%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 2803 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 2860
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GELY WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 2861 HCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 2918
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L++ L+G +V A +G +
Sbjct: 2919 ASGELYTWGKGRYGRLGHGD---------SEDQLKPKLVEALQGHRVIDVACGSGDAQTL 2969
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
YTWG + LG GS D + P +VQG V ++ G H +E G++ TWG
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3085
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1762 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 1819
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R S + ++K KV + + G H+ +
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 1873
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+WG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 1933
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 1934 LGEYGRLGHGDNTTQLRPKLVKVLLGHRVV-QVACGSRDAQTLALTDEGMVFSWGDG 1989
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 125/303 (41%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 2763 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 2821
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F ++ A+ G + +A++ G++ SWG G+
Sbjct: 2822 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGK 2881
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G +Y +G
Sbjct: 2882 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYG 2932
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 2933 RLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 2992
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 2993 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 3047
Query: 384 LDR 386
+ R
Sbjct: 3048 VRR 3050
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3032 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3091
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 3092 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 3126
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H + TE G VYA G N + QLG + N
Sbjct: 60 LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+++DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL G A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L V V A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 229 TPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQIM 286
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 282 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 21/260 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + IT E++++G N + LG G + + +P K+E
Sbjct: 19 LSPQEIASIRKACV-FGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 75
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + V T G+V +WG G +LG+G + + ++ T
Sbjct: 76 ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 130
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
LIK KV A G HS + +G +Y +G ++ + P +S
Sbjct: 131 LLIK-----KVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ 185
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+ VV CG + + + GE+Y WG N NG LG+G+ +P RV S V Q+
Sbjct: 186 GKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC-VLQI 244
Query: 347 SCGWKHTAAIS-EGKILTWG 365
+CG+ HT A++ EG + WG
Sbjct: 245 ACGYAHTLALTDEGLLYAWG 264
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 271 LG-TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322
Query: 161 AAKVIPIPTKVECLSGIF 178
+ P T C +F
Sbjct: 323 -SVTFPHLTHFACTDDVF 339
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 36/217 (16%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ +T +V +G S LG G S + P+ ++ L G K+ + G
Sbjct: 38 NEAIYITHSDEVFVFGLNCSNCLGTGDNQSTI---------VPKKLEALCGKKISSLSYG 88
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYH 299
H E+G VY +G ++ N P LI K+ EV CG +H
Sbjct: 89 SGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVV---EVACGSHH 145
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
+ L+ G+LY WG N G +G GS +P RV V ++CG + A ++
Sbjct: 146 SMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNN 205
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
G++ WG+ G+ GQL G QLTP
Sbjct: 206 GEVYGWGYNGN------------GQLGLGNNGNQLTP 230
>gi|418738679|ref|ZP_13295072.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410745377|gb|EKQ98287.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 506
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 487
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 136/317 (42%), Gaps = 31/317 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 357
L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNIKNASSVWAGGTQSFSILK 417
Query: 358 EGKILTWGWGGSHGTFS 374
G++ WG G+ +
Sbjct: 418 NGEVKGWGANGNTANLA 434
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 29/268 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
L +V+ G H+ LT GE+Y WG N+ G LG G + + +P +V+G S
Sbjct: 292 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG---LSG 348
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ Q++ G H A+ S+G+I +WG S
Sbjct: 349 IKQIANGRDHILALASDGRIYSWGLNAS 376
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 147/341 (43%), Gaps = 28/341 (8%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G ++G+LG G S V+ ++ ++ +++ + + G VY G N GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 209
Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LGI N G P + G+ V+ + G++H+ + DG + +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268
Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
QLG G A P V LS + Q G E S A+T G+V WG G LG
Sbjct: 269 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 326
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+G+ S+ + + TP ++ L G+K A G H + +GR+Y +G A ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASDGRIYSWGLNASGQL 379
Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN-GCLGIGSID 326
N P+ I + + V GG + + GE+ WG+N N L IG +
Sbjct: 380 GIGGNGSPNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
L E + V CG H A + +G+I WGW
Sbjct: 440 TLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGW 480
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN-GQ 154
N GQLGI N + P +I +K + G S +I +GE+ WG N N
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNIKN-ASSVWAGGTQSFSILKNGEVKGWGANGNTAN 432
Query: 155 LGLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
L +G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 433 LAIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGDGEIYGWGWNFKGSLGR 488
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3777 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3835
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+LY WGK G+LG G ++ P VE
Sbjct: 3836 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKP--KLVEA 3893
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3894 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3944
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3945 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4004
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4005 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4063
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4064 SAHTLAWSTSK 4074
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G +++ G D
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 2828
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 2887
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 2996
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3056
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3057 G-LEGQKITRVACGSSHSVA 3075
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2772
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 2773 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 2831
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 2832 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 2882
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 2943 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 2998
Query: 386 RGQLT 390
+ Q+
Sbjct: 2999 KPQVV 3003
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3817 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGR 3876
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 3877 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3934
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3935 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3991
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3992 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4044
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4045 RPRLVAALQGKKINRVACGSAHT 4067
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 2787 IPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDK 2841
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 2842 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 2900
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 2901 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQG 2958
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G V +WG G RLGHG + + P++++ L G
Sbjct: 2959 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQVVEGLRGK 3009
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--E 292
K+ A G LH + + G+VY +GD Q+GN R+P+L+ L +
Sbjct: 3010 KIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITR 3065
Query: 293 VVCGGYHTCVLTS 305
V CG H+ T+
Sbjct: 3066 VACGSSHSVAWTT 3078
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3711 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPIQLIGGEQTLFAVTADGKLYATGYGAG 3768
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3769 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3826
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 3827 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 3881
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3882 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3995
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 3996 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4028
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 2810
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2811 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 2868
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2980 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3037
Query: 370 HG 371
HG
Sbjct: 3038 HG 3039
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2814
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 2815 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 2874
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 2875 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 2932
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3706 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATG 3764
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3765 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3824
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G +Y +G
Sbjct: 3825 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 3875
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3876 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3936 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 3990
Query: 384 LDR 386
+ R
Sbjct: 3991 VRR 3993
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 71/187 (37%), Gaps = 42/187 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +G+ +SL
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA--VFSL-------- 406
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ G+++ WG G+LG G + P +E L + +
Sbjct: 407 ------------------IFGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVK 446
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + SVA+T G+V SWG G + RLGHG E + R K LEG++
Sbjct: 447 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV------------RYPKLLEGLQAT 494
Query: 242 IAAAGFL 248
+ A L
Sbjct: 495 LPQANCL 501
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3975 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4034
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4035 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4069
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 414 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 473
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQ 127
L G E++ Y P + GL+ + Q
Sbjct: 474 LGHGTEEHVRY---PKLLEGLQATLPQ 497
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 40/174 (22%)
Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P++ GL + QI+ ++ +G +YM NS+ +G+ V
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGV-------------VAV 403
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
S IF G+V SWG G G+LG G S TP+LI+
Sbjct: 404 FSLIF-----------------GQVWSWGDGDYGKLGRGG---------SDGCKTPKLIE 437
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+L+ + V G S + ++G+VY +G ++ H R P L+ L
Sbjct: 438 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
G+V+ +GD K+ + + P LI KL + +V CG + LT G++Y+WG
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC---------GWKHTAAISEGKILTWG 365
+N LG G+ + + P+ ++G + P Q +C KH I+ G ++
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLEGLQATLP--QANCLSKKXXXXLDTKHIVGIACGPAQSFA 526
Query: 366 W 366
W
Sbjct: 527 W 527
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 151/342 (44%), Gaps = 43/342 (12%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGIC---KRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
LGR+ T+ + Q + + I I+ T R L G DYG+LG G +S
Sbjct: 253 LGRATTSPSDSTPTQASLINDAVSISLGEYHAIALTNDGRVVTL-GRDDYGQLGDGPGDS 311
Query: 59 ---RWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
P + +KA+A G H+L LT G VYA G ND GQLG+
Sbjct: 312 SGTHTAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQE 371
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKV 171
P I GL +V+ ++ G H+ A+ DG ++ WG N NG+LG G + P +PT V
Sbjct: 372 SPALIPGLS-DVIALAAGDDHTLALKADGSVWAWGDNPNGELGTGD----ITPYSVPTAV 426
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G+ K A G SVA+ G V +WG G+LG+G T+ P
Sbjct: 427 SNLPGV--KAIAAGGNHSVALLADGTVRTWGYNNHGQLGNGSN---------TNSNVPVP 475
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARR-----PSLIS 285
+ L V V IAA G+ + + NG V +G D + FQ GN A P +
Sbjct: 476 VTGLTDV-VGIAA-GYEFTLAVLSNGSVKAWGHDDS-----FQLGNGATTGDQTTPVDVQ 528
Query: 286 KLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+P V G +H L G + WGSN G LG G+
Sbjct: 529 GIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDGT 570
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 141/312 (45%), Gaps = 21/312 (6%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
+R P+ ++L A GG + + G V++ G N +GQLG + P +
Sbjct: 211 TRTAPLTLRVLRANTL---AAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQ 267
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK---KAAKVIPIPTKVECL 174
S L + V IS G +H+ A+T DG + G++ GQLG G P
Sbjct: 268 AS-LINDAVSISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILP 326
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+GI G S+A+T G V +WG G+LG LG + + E +P LI
Sbjct: 327 AGIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLG-------LGTITAPQE-SPALIPG 378
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
L V AAG H+ + +G V+ +GD ++ + P+ +S LP + +
Sbjct: 379 LS--DVIALAAGDDHTLALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPGVKAIA 436
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT- 353
GG H+ L + G + TWG N +G LG GS + P V G + V ++ G++ T
Sbjct: 437 AGGNHSVALLADGTVRTWGYNNHGQLGNGSNTNSNVPVPVTG---LTDVVGIAAGYEFTL 493
Query: 354 AAISEGKILTWG 365
A +S G + WG
Sbjct: 494 AVLSNGSVKAWG 505
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 147/336 (43%), Gaps = 34/336 (10%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG + S P S +++ G H + LT G V G +D+G
Sbjct: 245 WGDNTYGQLGRATTSPSDSTPTQASLINDA--VSISLGEYHAIALTNDGRVVTLGRDDYG 302
Query: 102 QLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
QLG + N+ ++ P +G+K VQ G +HS A+T +G +Y WG+N
Sbjct: 303 QLGDGPGDSSGTHTAPNLRDNILP---AGIKAVAVQ--AGRYHSLALTSEGTVYAWGRND 357
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLGLG A P + LS + A G + ++A+ G V +WG +G LG
Sbjct: 358 VGQLGLGTITAPQ-ESPALIPGLSDVIALAA--GDDHTLALKADGSVWAWGDNPNGELGT 414
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G T P + L GVK AAG HS + +G V +G ++
Sbjct: 415 GDI---------TPYSVPTAVSNLPGVKA--IAAGGNHSVALLADGTVRTWGYNNHGQLG 463
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHS 330
++ P ++ L + G T + S G + WG +++ LG G+ +
Sbjct: 464 NGSNTNSNVPVPVTGLTDVVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQTT 523
Query: 331 PERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWG 365
P VQG + V ++ G H A + +G ++ WG
Sbjct: 524 PVDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWG 559
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 21/262 (8%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
PL + L+ ++ G + S+AI +G+++ WG N+ GQLG + PT+ +
Sbjct: 215 PLTLRVLRANT--LAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPS-DSTPTQASLI 271
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ + +LG ++A+T G+V++ G G+LG G S S + P L
Sbjct: 272 NDAVS--ISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDS------SGTHTAPNLRDN 323
Query: 235 L--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE 291
+ G+K AG HS + G VY +G V ++ L P+LI L
Sbjct: 324 ILPAGIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQESPALIPGLSDVI 383
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGW 350
+ G HT L + G ++ WG N NG LG G I +P V S P V ++ G
Sbjct: 384 ALAAGDDHTLALKADGSVWAWGDNPNGELGTGDI----TPYSVPTAVSNLPGVKAIAAGG 439
Query: 351 KHTAA-ISEGKILTWGWGGSHG 371
H+ A +++G + TWG+ +HG
Sbjct: 440 NHSVALLADGTVRTWGY-NNHG 460
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G + P S +KA+A GG H++ L G V G N+ GQ
Sbjct: 404 WGDNPNGELGTGDITPYSVPTAVSNLP--GVKAIAAGGNHSVALLADGTVRTWGYNNHGQ 461
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N ++ P+ ++GL +VV I+ GY + A+ +G + WG + + QLG G
Sbjct: 462 LGNGSNTNSNV-PVPVTGLT-DVVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTG 519
Query: 163 KVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
P V+ + +G + G ++A+ G +++WG+ G+LG G +S
Sbjct: 520 DQT-TPVDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDGTPNS 573
>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
motifs [Arabidopsis thaliana]
Length = 1108
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 151/334 (45%), Gaps = 34/334 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLND 99
WG GRLG G + + P +V S S+ +ACG HT +T G +Y G ++
Sbjct: 310 WGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 369
Query: 100 FGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG +I + + P RI+G + V +S G H++ IT G L+ +G + G LG
Sbjct: 370 VGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGH 428
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G K + + P +VE LSG+ T + G + AV GK+ +WG G
Sbjct: 429 GDK--ETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGD 486
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + L P + L A G + + +G+V+ G
Sbjct: 487 KNRLGHGDKDPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGS- 536
Query: 266 AVDKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
V L + P L+ KL + EE+ CG YH LTS E+YTWG NG LG
Sbjct: 537 TVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGH 596
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G ++ P V+ + V ++CG +TAAI
Sbjct: 597 GDLEDRKVPTIVEA-LKDRHVKYIACGSNYTAAI 629
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 35/315 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL--KKEVVQISTG 131
+ACG H F+T G ++ G G+L GI +++ P + L V ++ G
Sbjct: 291 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV---FHPRLVESLTATSSVDFVACG 347
Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H+ A+T+ GELY WG ++ G LG G + IP L G+ + G +
Sbjct: 348 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP-KRIAGSLEGLHVASVSCGPWHT 406
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G++ ++G G G LGHG + ++ +Y PR ++ L G++ + G H
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKETV--------QY-PREVESLSGLRTIAVSCGVWH 457
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
+A + E +G+++ +GD +++ + + +P+ + L Y+ ++ C
Sbjct: 458 TAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC 517
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G T LT+ G+++T GS G LG D P V+ + V+++SCG H AA
Sbjct: 518 GHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDG-KLPCLVEDKLASEFVEEISCGAYHVAA 576
Query: 356 I-SEGKILTWGWGGS 369
+ S ++ TWG G +
Sbjct: 577 LTSRNEVYTWGKGAN 591
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 98 NDFGQLGISENIGYSL--------EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
++ ++GI +N Y +PL S + +V QI+ G H++ +T GE++ WG+
Sbjct: 254 DNVVKVGIDKNASYLTTRTDVLVPKPLE-SNIVLDVHQIACGVRHAAFVTRQGEIFTWGE 312
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAG--GS 206
S G+LG G K + P VE L+ + A G + AVT G++ +WG G
Sbjct: 313 ESGGRLGHG--IGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNV 370
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G LGHG + S + P+ I LEG+ V + G H+A I GR++ FGD
Sbjct: 371 GLLGHGSD---------ISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDG 421
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS------------GGELYT 311
+ + + P + L + V CG +HT + G+L+T
Sbjct: 422 TFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFT 481
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG--G 368
WG + LG G D P V + +++CG T + + G++ T G G
Sbjct: 482 WGDGDKNRLGHGDKDPRLKPTCVPA-LIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYG 540
Query: 369 SHGTFSEDG 377
G DG
Sbjct: 541 QLGNLQTDG 549
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
+++ R WG G GRLG G LE R P + A + +K +ACG +T
Sbjct: 574 VAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYT 626
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3810 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3869
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3870 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3927
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3928 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3984
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3985 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4037
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4038 RPRLVAALQGKKVNRVACGSAHT 4060
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3770 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3828
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3829 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3886
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3887 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3937
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3938 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3997
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 3998 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4056
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4057 SAHTLAWSTSK 4067
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3704 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3761
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3762 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3819
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3820 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3874
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3875 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 3929 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3988
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 3989 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4021
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 24/298 (8%)
Query: 66 SAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+A + +K +A G + T F G V++ G D G+LG +S P I LK
Sbjct: 2793 TALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLG-----HFSRMPRLIEALKT 2847
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
K + I+ G HS+A+T GELY WG G+LG G ++ P KV L G Q
Sbjct: 2848 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQV 2905
Query: 183 ALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G Q++A+T G V S G G ++G G E P+ I+ L G V
Sbjct: 2906 ACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNI--------PQNIERLNGQGV 2957
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GG 297
G S + ++G V+ +G ++ H R+P ++ L + V C G
Sbjct: 2958 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGA 3017
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
H +T G++Y WG N++G G G+ V P VQG + +V+CG H+ A
Sbjct: 3018 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3074
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 150/310 (48%), Gaps = 34/310 (10%)
Query: 6 LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC 65
+TA++ Y +K K+ G + + F+ WG GD G+LG S P +
Sbjct: 2792 ITALSSYVVK---KVAVHSGTSQTGFXPVDGKVFS--WGEGDDGKLGHFSR----MPRLI 2842
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 2843 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVLLGHR 2901
Query: 125 VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V+Q++ G + A+T +G ++ G ++G G + K IP +E L+G Q
Sbjct: 2902 VIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPE-VKGCNIPQNIERLNGQGVCQI 2960
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK-VK 241
G + S+A+T G V +WG G RLGHG + + P++++ L G K V
Sbjct: 2961 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV---------RKPQVVEGLRGKKIVA 3011
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVVC 295
+ +G LH + ++G+VY +GD Q+GN R+P+L+ L + V C
Sbjct: 3012 CSCSGALHCLAVTDSGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITRVAC 3067
Query: 296 GGYHTCVLTS 305
G H+ T+
Sbjct: 3068 GSSHSVAWTT 3077
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3699 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3757
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3758 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3817
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3818 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3868
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3869 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3929 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 3983
Query: 384 LDR 386
+ R
Sbjct: 3984 VRR 3986
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 151/341 (44%), Gaps = 29/341 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATG-LNDF 100
WG D +LG + P ++ +A GG+ +LF +T G VYA G +
Sbjct: 2715 WGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEATKW 2773
Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+ + G P I+ L VV+ + +G + VDG+++ WG+ +G+LG
Sbjct: 2774 PAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLG 2833
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ +P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 2834 HFSR------MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 2884
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKM-LFQ 273
+T++ P+++K L G +V A G + + + G V+ GD + K+
Sbjct: 2885 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGP 2938
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
E P I +L ++ CG + LT G ++TWG + LG GS + P
Sbjct: 2939 EVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP 2998
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
+ V+G + V G H A+++ G++ WG HG
Sbjct: 2999 QVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWG-DNDHG 3038
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 108/243 (44%), Gaps = 28/243 (11%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ +++ WG N QLG G K K I +P+ E LS + Q A G + AVT
Sbjct: 2704 SAATIRTKVFSWGLNDKDQLG-GLKNKK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2761
Query: 196 GKVLS------WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
GKV + W A G G + G G + + S Y VK +G
Sbjct: 2762 GKVYACGEATKWPAWGLG-ISSGTVPIPHGXITALSSYV---------VKKVAVHSGTSQ 2811
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
+ +G+V+ +G+ K+ G+ +R P LI L ++ CG H+ LTS G
Sbjct: 2812 TGFXPVDGKVFSWGEGDDGKL----GHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSG 2867
Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTW 364
ELYTWG E G LG G P+ V+ V QV+CG + A EG + +
Sbjct: 2868 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSL 2926
Query: 365 GWG 367
G G
Sbjct: 2927 GDG 2929
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3968 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4027
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4028 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP +++AA LH C+++
Sbjct: 223 -TP----------MRVAA---LHRVCVNQ------------------------------- 237
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+VCG HT LT G LY WG+N G LG G+ + L +PE + E V+
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPEHIMVE-KERVVEIA 290
Query: 347 SCGWKHTAAISE--GKILTWG 365
+C H +A G + WG
Sbjct: 291 ACHSTHISAAKTQGGHVYMWG 311
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPM--RVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PEHIMVEKERV-VEIAACHSTHISAAKTQGGHVYMWG 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPMRV-AALHRVCVNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P+ +A + + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 155/323 (47%), Gaps = 28/323 (8%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
WR + ++ LK G + T F+ +YA G N+FGQLGI +I YS +
Sbjct: 2 WRRAI-----QNCLKIAFIGSSITFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+ I + V+ ++ S+AI G+LY WG++ G LG G+ + I IPT VECL
Sbjct: 57 VPI----QNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINIPTLVECLK 110
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
+ K A G A+T G++ +WG G+LGH ++ R EY L
Sbjct: 111 HLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAK 170
Query: 232 IKELEGVKVKI--AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKL 287
+ EL + K+ + G + + ++G VY G +L E +A S IS L
Sbjct: 171 LPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNK-KGILGYETKNAEELSFKQISNL 229
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
++ G + L S G ++ WGSN G LG S V+ +P++++G + Q S
Sbjct: 230 KNIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKG---LPKIKQFS 286
Query: 348 CGWKHTAAIS-EGKILTWGWGGS 369
CG + A+S +G + TWG+GG
Sbjct: 287 CGEQFIGALSADGVLYTWGFGGD 309
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 172/389 (44%), Gaps = 50/389 (12%)
Query: 20 LGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG 79
+GS + ++ S Q + A WG ++G+LG+G+ S++ P + ++ +AC
Sbjct: 15 IGSSITFTSSFVFS--QEQLYA-WGWNNFGQLGIGNSISQYSPQLVPI---QNVLFVACK 68
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
+ + + ++G +Y G + FG LG ENI P + LK + ++ G +H +
Sbjct: 69 SSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINI---PTLVECLKHLDFKYVACGNYHMA 125
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-------------FTKQAA 183
AIT DG+LY WG +G+LG +P K E + Q +
Sbjct: 126 AITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVS 185
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG + ++ ++ G V S G G LG+ ++ E + + I L+ + ++I
Sbjct: 186 LGDQFTLILSDDGNVYSVGLNKKGILGYET--------KNAEELSFKQISNLKNI-IQID 236
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
+ G S +D +G ++ +G ++ + + P I LP ++ CG L
Sbjct: 237 S-GTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGLPKIKQFSCGEQFIGAL 295
Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
++ G LYTWG +G LG S + +P ++ + +D+VSCG H IS K+
Sbjct: 296 SADGVLYTWGFGGDGQLGTPSKQDIPTPHKIS---FDHNIDKVSCGQAHVGIISNNKLYM 352
Query: 364 WGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
G G GQL RG T S
Sbjct: 353 HGRGKE------------GQLGRGSETES 369
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 146/351 (41%), Gaps = 33/351 (9%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
CK +S+ + + WG +G LG G +E+ P + + K +ACG H
Sbjct: 67 CKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAA 126
Query: 86 LTETGCVYATGLNDFGQLGIS----------------ENIGYSLEPLRISGLKKEVVQIS 129
+T G +Y G D G+LG S +N+G + P + L +V Q+S
Sbjct: 127 ITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLP-ELVKLNFKVHQVS 185
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + ++ DG +Y G N G LG K A+ + ++ L I Q G + S
Sbjct: 186 LGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSF-KQISNLKNII--QIDSGTDFS 242
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA+ G + +WG+ G+LG S I TP+ IK L K+K + G
Sbjct: 243 VALDSDGNMFAWGSNYFGQLGTPSPSVI---------QTPQQIKGLP--KIKQFSCGEQF 291
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+ +G +Y +G ++ P IS ++V CG H ++ S +L
Sbjct: 292 IGALSADGVLYTWGFGGDGQLGTPSKQDIPTPHKISFDHNIDKVSCGQAHVGII-SNNKL 350
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
Y G + G LG GS + R V +++CG H+ AI K
Sbjct: 351 YMHGRGKEGQLGRGSETESPNSSRYSPLLVLENVLKIACGGSHSFAIVNQK 401
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 151/336 (44%), Gaps = 45/336 (13%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYA 94
F G G YGRLGLG ++ + + F+ L HTL LT G VY+
Sbjct: 415 FVHACGKGSYGRLGLGDSTNQTQLKRLN-FDNECLVKSVSSSKGSDGHTLALTLDGKVYS 473
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNG 153
G D+G+LG + + L L +VV I+ GY HS+A+T DGELY WG+ G
Sbjct: 474 WGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYG 533
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHG 212
+LG G ++ +P+ K G Q A G +V V+ G+ V S+G+G +G+LGH
Sbjct: 534 RLGHGDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHS 589
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------- 263
+ + Y P++I+ L+G+ ++ G S + G+VY++G
Sbjct: 590 DTNRV---------YKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGS 640
Query: 264 ---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A K+L +H+ ++ G H LT +Y WG+N G
Sbjct: 641 VDATSATPKLLLALQSHSVV-----------DISVGDSHCVALTQDNNVYAWGNNSMGQC 689
Query: 321 GIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAA 355
G G + P++V G V Q+S G HT A
Sbjct: 690 GQGHCTTPITKPKKVLG-LDGVAVHQISAGTSHTVA 724
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 153/337 (45%), Gaps = 35/337 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L GS++ P + ++F S + + G T + G V+A G +G
Sbjct: 368 VWGSNSSHQLAEGSMDKILVPKLATSF--GSAQQIEAGQYCTFVIFPDGFVHACGKGSYG 425
Query: 102 QLGISENIGYS-LEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+LG+ ++ + L+ L L K V H+ A+T+DG++Y WG G+LG G
Sbjct: 426 RLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGKLGHG 485
Query: 159 KKAAKVIP------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ IP + KV C A G+ S AVT G++ +WG G GRLGHG
Sbjct: 486 NSQTQKIPKLVEGALGNKVVCC-------IAAGYRHSAAVTEDGELYTWGEGDYGRLGHG 538
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKML 271
+ S P +K++ V A G H+ C+ ++G+ V+ FG K+
Sbjct: 539 D---------NNSRNVPVQVKDV--ANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLG 587
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ N +P +I L +V CG + LTS G++Y WG + LG GS+D
Sbjct: 588 HSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPS--LGTGSVDATS 645
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
+ ++ V +S G H A++ + + WG
Sbjct: 646 ATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWG 682
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 16/263 (6%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA--AKVIPIPTKVECLSGIFTKQAAL 184
QI G + + I DG ++ GK S G+LGLG ++ + ECL +
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKG- 457
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA- 243
++A+T GKV SWG G G+LGHG S ++ P+L++ G KV
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDYGKLGHG---------NSQTQKIPKLVEGALGNKVVCCI 508
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT-CV 302
AAG+ HSA + E+G +Y +G+ ++ + N P + + +V CG HT CV
Sbjct: 509 AAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVANVGQVACGSAHTVCV 568
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
G ++++GS +NG LG + ++ P+ ++ + +V CG + + A+ S G++
Sbjct: 569 SQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEA-LQGMVIRKVCCGSQCSLALTSTGQV 627
Query: 362 LTWGWGGSHGTFSEDGHSSGGQL 384
WG G S GT S D S+ +L
Sbjct: 628 YVWGCGPSLGTGSVDATSATPKL 650
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG+ S +L G IL +TS + + I+ + I GF+H+
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQQIEAGQYCTFVIFPDGFVHACGKGSY 424
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY--------HTCVLTSGGE 308
GR+ + GD L +L + E + HT LT G+
Sbjct: 425 GRLGL-GDSTNQTQL-------------KRLNFDNECLVKSVSSSKGSDGHTLALTLDGK 470
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
+Y+WG + G LG G+ P+ V+G V ++ G++H+AA++E G++ TWG G
Sbjct: 471 VYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEG 530
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 32/344 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DETGRPVRRDIVIPKR--CAPQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ + E+G ++ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
P + L ++ GG+H+ LT+ GE+Y WG E+G LG G D
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
P++V E + QVSCG H+ A++ +G+I ++G G HG
Sbjct: 293 PQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFG-RGDHGRL 334
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G ++A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSF-PIPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T +GE+Y WG+ +G+LG G +P KV L+G
Sbjct: 246 DDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII 305
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 123/292 (42%), Gaps = 12/292 (4%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V A G + GQLG+ + L + + V + G +S AI DG+L+ WG N
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G LG K P+ V+ L+ + QAA+G +AV G+ +WG G+ G
Sbjct: 67 RGTLGH-PPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125
Query: 212 GQESSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +R R +L V+ AAG HS + G V+ +G
Sbjct: 126 EPSKDETGRPVRRDIVIPKRCAPQL---TVRQVAAGGTHSVVLTREGYVWTWGQPWPPGD 182
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ Q P + L + G +H L G L+ WG+NE G LG G
Sbjct: 183 IKQ----ISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSF 238
Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHSS 380
P VQG + VD + GW TA +EG++ WG G HG F ++ SS
Sbjct: 239 PIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG-RGEHGRLGFGDNDKSS 289
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R P+ + +L +A GG H+ LT G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L ++++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFT 179
P +P + L G F
Sbjct: 340 VTTGQPLELPIDIPPLEGRFN 360
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 24/304 (7%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQ 127
++HS + G + LT+TG VY+ GL +G+LG S+ P IS K K++ Q
Sbjct: 206 KEHSPTTIKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISI-PSMISAFKNKQITQ 264
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G HS A+ G +Y WG S G+LGLG ++V+ IP + A G E
Sbjct: 265 IACGKDHSLALDEIGVVYAWGNGSGGRLGLGN--SEVVSIPKIIPHFEDEKITSIACGQE 322
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S+A++ GKV SWG G G LG+ + + S+ TP++I L + G
Sbjct: 323 FSLALSDSGKVFSWGKGLHGNLGYDVSTML-------SQSTPKVIPMLPPASQ--ISCGN 373
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
HS + ++G VY FG +D L GN P+++ +++ G VL+
Sbjct: 374 WHSMVLSKSGDVYTFGSN-IDCRLGHSGN-GSTPTMVQIGSKIKKIGAGANFNAVLSESN 431
Query: 308 ELYTWGSNENGCLGIGSIDVLH---SPERVQG--PFSESPVDQVSCGWKHTAAISE-GKI 361
+YTWGSN + LG+ D + P+ V+ P+ P+ + G++H +++ G++
Sbjct: 432 AIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPY---PISTIEVGYEHVVVLTDTGEV 488
Query: 362 LTWG 365
T+G
Sbjct: 489 FTFG 492
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 148/319 (46%), Gaps = 34/319 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG + P + SAF+ + +ACG H+L L E G VYA G G+
Sbjct: 232 WGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSGGR 291
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG------ 156
LG+ + S+ + +++ I+ G S A++ G+++ WGK +G LG
Sbjct: 292 LGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLGYDVSTM 351
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + KVIP+ Q + G S+ ++ G V ++G+ RLGH S
Sbjct: 352 LSQSTPKVIPMLPP--------ASQISCGNWHSMVLSKSGDVYTFGSNIDCRLGHSGNGS 403
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR---AVDKMLFQ 273
TP +++ G K+K AG +A + E+ +Y +G + +L
Sbjct: 404 -----------TPTMVQ--IGSKIKKIGAGANFNAVLSESNAIYTWGSNIHCQLGVLLPD 450
Query: 274 EGNHARRPSLI-SKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG-SIDVLHS 330
N+ P ++ + LPY + GY H VLT GE++T+G N G+G +I + +
Sbjct: 451 HRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGVGEAIKEVCN 510
Query: 331 PERVQGPFSESPVDQVSCG 349
RV+ P S V +++ G
Sbjct: 511 FTRVKIP-DNSTVFKIAAG 528
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
K EC++ + T + S G + WG L + G L + E++P
Sbjct: 152 KKECIN-LLTSLRSSKMTVSNGTGGSVPIYQWGQMLCPSLSLIATGTPTGVLFNQKEHSP 210
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
IK + V + + G VY +G + K+ N PS+IS
Sbjct: 211 TTIKFGQNFAVMLT-----------DTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKN 259
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+ ++ CG H+ L G +Y WG+ G LG+G+ +V+ P ++ F + + ++
Sbjct: 260 KQITQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIP-KIIPHFEDEKITSIA 318
Query: 348 CGWKHTAAISE-GKILTWGWGGSHGTFSED 376
CG + + A+S+ GK+ +WG G HG D
Sbjct: 319 CGQEFSLALSDSGKVFSWG-KGLHGNLGYD 347
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGL-KKEVVQIS 129
+K + G L+E+ +Y G N QLG+ ++ Y+ EP + L + I
Sbjct: 414 IKKIGAGANFNAVLSESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIE 473
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAALGFEQ 188
GY H +T GE++ +G NS Q G+G+ +V K+ S +F K AA G
Sbjct: 474 VGYEHVVVLTDTGEVFTFGDNSMMQCGVGEAIKEVCNFTRVKIPDNSTVF-KIAAGGNSS 532
Query: 189 SVAVTGGGKV 198
++++ G +
Sbjct: 533 LISLSSGHNI 542
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4067 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4126
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4127 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4184
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4185 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4242 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4294
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4295 RPRLVAALQGKKVNRVACGSAHT 4317
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 148/321 (46%), Gaps = 23/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3019 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3077
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3078 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3136
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3191
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3192 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3245
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3246 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3305
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
QG + +V+CG H+ A
Sbjct: 3306 QG-LEGQKITRVACGSSHSVA 3325
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2963 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3022
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3023 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3081
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3082 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3133 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3192
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3193 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3248
Query: 386 RGQLT 390
+ Q+
Sbjct: 3249 KPQVV 3253
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G +VIP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4027 ESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4085
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4086 PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4143
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4144 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4194
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4195 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4254
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4255 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4313
Query: 350 WKHTAAISEGKILTWG 365
HT A S K + G
Sbjct: 4314 SAHTLAWSTSKPTSTG 4329
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ +G VY N +L P + GL
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDALAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEVIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3073 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3133 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3190
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3191 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3247
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3248 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3296
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3297 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3328
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4019
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 RLGIGGTESVSTPTLLESVQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4077
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P VE L GI A G S VT G + +WG G GRLGH
Sbjct: 4078 GNRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4131
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4132 -----SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4186
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 4187 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4246
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V ++ G H +E G++ TWG
Sbjct: 4247 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3001 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3060
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3061 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3118
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3119 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3169
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3170 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3229
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3230 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3287
Query: 370 HG 371
HG
Sbjct: 3288 HG 3289
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 25/231 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSN 152
++G+L G SE+ + P+ ++GLK +V+ ++ +G + A+T +G+++ WG
Sbjct: 579 GNYGRLGHGSSED---EVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G+LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG
Sbjct: 636 GKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E + P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 694 TEEHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2955 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3012
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 3013 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3064
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3065 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3124
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3182
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4015 YGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G++V AAG HSAC+ G +Y +G
Sbjct: 4075 LGHGNRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4126 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4186 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4240
Query: 384 LDR 386
+ R
Sbjct: 4241 VRR 4243
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4225 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4284
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4285 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G AC + +GRVY + A+ L Q G +R ++I +S+
Sbjct: 449 LASLGVTQIACAEKRFLILSRSGRVYTQAYNSDALAPQLVQ-GLASR--NIIKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 165/356 (46%), Gaps = 32/356 (8%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+++ L+ WG+G+ G+LG+G E + P A +++ A+ G ++L + + G
Sbjct: 1 MATPLRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDG 60
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGK 149
++ G N G LG P + L ++VQ + G H A+ G Y WG
Sbjct: 61 RLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGG 120
Query: 150 NSNGQLGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
N GQ G G +A + IPIP + C + +Q A G SV +T G V +W
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTW 178
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G + G ++ S TP ++ LE KV++ A G H+ + E+ ++
Sbjct: 179 G-----------QPWPPGDIKQIS--TPVRVQGLE--KVRVIAVGAFHNLALTEDVILWA 223
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ ++ + +P + L ++ GG+H+ LT GE+Y WG E+G
Sbjct: 224 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGR 283
Query: 320 LGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
LG G H P +V+ E V QVSCG H+ A++ +G++ ++G G HG
Sbjct: 284 LGFGDDKSSHMVPLKVELLAGEDIV-QVSCGGTHSVALARDGRMFSYG-RGDHGRL 337
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV EK ++ +A G H L LTE ++A G N++GQLG + S +P+R+ GL
Sbjct: 193 PVRVQGLEK--VRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQPRS-QPIRVEGL 249
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T+DGE+Y WG+ +G+LG G + + +P KVE L+G
Sbjct: 250 SDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHM-VPLKVELLAGEDIV 308
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-K 239
Q + G SVA+ G++ S+G G GRLG+G++ + G P L +G +
Sbjct: 309 QVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTT-GHPMELPINLPPLSSSRDGRWQ 367
Query: 240 VKIAAAGFLHSACIDE 255
K A G H+ I E
Sbjct: 368 AKYVACGGRHTLAIAE 383
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 124/292 (42%), Gaps = 11/292 (3%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGK 149
V A G + GQLG+ N P + L V + G +S AI DG L+ WG
Sbjct: 9 AVLAWGSGEDGQLGMGGNEEKDW-PHFVEALGPYAVTAVVAGSRNSLAICDDGRLFTWGW 67
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N G LG + K P V+ L+G QAA+G +AV G+ +WG G+
Sbjct: 68 NQRGTLGHPPET-KTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQC 126
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G E G R+ P + +KV+ AAG HS + + G V+ +G
Sbjct: 127 GEEPERKEDG-TRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPPG 185
Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ Q P + L + G +H LT L+ WG+NE G LG G
Sbjct: 186 DIKQ----ISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQPRS 241
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT--FSEDGHS 379
P RV+G S VD + GW TA +G++ WG G HG F +D S
Sbjct: 242 QPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWG-RGEHGRLGFGDDKSS 292
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ SL +A GG H+ LT G VYA G + G+
Sbjct: 224 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGR 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + PL++ L +++VQ+S G HS A+ DG ++ +G+ +G+LG G+K
Sbjct: 284 LGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKV 343
Query: 162 AKVIP--IPTKVECLS 175
P +P + LS
Sbjct: 344 TTGHPMELPINLPPLS 359
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4064 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4123
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4124 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4182 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4239 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4291
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4292 RPRLVAALQGKKVNRVACGSAHT 4314
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3016 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3076 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3134
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3135 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3188
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3189 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3243
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3244 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3303
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3304 G-LEGQKITRVACGSSHSVA 3322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2960 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3019
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3020 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3078
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3079 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3130 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3189
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3190 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3245
Query: 386 RGQLT 390
+ Q+
Sbjct: 3246 KPQVV 3250
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4024 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4082
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4083 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4140
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4141 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4191
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4192 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4251
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H + GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4252 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4310
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4311 SAHTLAWSTSK 4321
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3070 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3130 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3187
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3188 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3244
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3245 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3293
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3294 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3325
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 3958 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4016
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4074
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4075 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4128
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4129 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4183
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 4184 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4243
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V ++ G H SE G++ TWG
Sbjct: 4244 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4275
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2998 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3057
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3058 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3115
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3116 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3166
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3167 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3226
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3227 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3284
Query: 370 HG 371
HG
Sbjct: 3285 HG 3286
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2952 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3009
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3063
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3064 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3123
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3124 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3179
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 121/303 (39%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3953 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4011
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4012 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4071
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G +V AAG HSAC+ G +Y +G
Sbjct: 4072 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4122
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4123 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4182
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4183 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4237
Query: 384 LDR 386
+ R
Sbjct: 4238 VRR 4240
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4274 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 122/235 (51%), Gaps = 11/235 (4%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++CG H++ + G V+A G GQLGI E S P +I L +++Q+S G++H
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 65
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A++ DG ++ WG+NS GQLGLGK ++ IP KV+ L GI Q A G S A++
Sbjct: 66 SLALSEDGHVFSWGRNSEGQLGLGKN-SRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 124
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G WG+ SG+L ++ G Y P I L+ + V + G+ H+A +
Sbjct: 125 TGTSFGWGSNRSGQL------ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLT 178
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSEEVVCGGYHTC--VLTSG 306
E G+V+ FG + ++ + R P LI + ++ C YHT V T+G
Sbjct: 179 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTG 233
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 124/251 (49%), Gaps = 20/251 (7%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G HS A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHY 64
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S+A++ G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG
Sbjct: 65 HSLALSEDGHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGG 116
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTC 301
HS + G + +G ++ GN + +P I L + CG HT
Sbjct: 117 THSFALSLTGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTA 175
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEG 359
VLT G+++T+G N +G L P+ ++G V Q+ C HT A + G
Sbjct: 176 VLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTG 233
Query: 360 KILTWGWGGSH 370
++++ G G SH
Sbjct: 234 QVVSLGRGPSH 244
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 25 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 84
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 85 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 144
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 145 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 204
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 205 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 239
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 30/339 (8%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P ++ L + V CG HT VLT G++Y WG+N G LG G+
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
P V + ++ +C HT+A G + WG
Sbjct: 298 SYPTPVTVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G V+ +G A ++ N
Sbjct: 80 LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS +++V+ CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 138 HGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 197
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
V G V ++CG A+ + G++ WG+ G+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4296 RPRLVAALQGKKVNRVACGSAHT 4318
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3022 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3082 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3140
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3141 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3194
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3195 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3249
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3250 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3309
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3310 G-LEGQKITRVACGSSHSVA 3328
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2966 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3025
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3026 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3084
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3085 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3136 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3195
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3196 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3251
Query: 386 RGQLT 390
+ Q+
Sbjct: 3252 KPQVV 3256
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4314
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4315 SAHTLAWSTSK 4325
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 617
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 678 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 722
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3076 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3136 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3194 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3250
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3251 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3299
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3300 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3331
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 601 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 659
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 660 VAAGSTHCLALTEDSEVHSWG 680
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3004 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3063
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3064 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3121
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3122 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3172
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3173 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3232
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3233 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3290
Query: 370 HG 371
HG
Sbjct: 3291 HG 3292
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2958 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3015
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3069
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3070 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3129
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3130 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3185
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4187 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4241
Query: 384 LDR 386
+ R
Sbjct: 4242 VRR 4244
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4320
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 509
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 510 AAITAEGELYTWGRGNYGRLGHGS-SED 536
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4058 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4117
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4118 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4176 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4232
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4233 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4285
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4286 RPRLVAALQGKKVNRVACGSAHT 4308
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2956 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3015
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3016 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3074
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3075 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3126 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3185
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3186 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3241
Query: 386 RGQLT 390
+ Q+
Sbjct: 3242 KPQVV 3246
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3012 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3072 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3131 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3184
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3185 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3239
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3240 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3299
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3300 G-LEGQKITRVACGSSHSVA 3318
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4018 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4076
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4077 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4134
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4135 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4185
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4186 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4245
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4246 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4304
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4305 SAHTLAWSTSK 4315
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3066 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3126 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3184 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3241 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3289
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3290 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3321
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3952 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4009
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4010 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4067
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4068 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4122
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4123 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4236
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4237 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4269
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2994 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3053
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3054 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3111
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3112 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3162
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3163 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3222
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3223 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3280
Query: 370 HG 371
HG
Sbjct: 3281 HG 3282
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2948 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3005
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3059
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3060 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3119
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3120 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3175
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3947 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4005
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4006 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4065
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4066 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4116
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4117 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4177 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4231
Query: 384 LDR 386
+ R
Sbjct: 4232 VRR 4234
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4216 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4275
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4276 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4310
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 312 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 371
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 372 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 429
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 430 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 486
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 487 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 539
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 540 RPRLVAALQGKKVNRVACGSAHT 562
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 272 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 330
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 331 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 388
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 389 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 439
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 440 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 499
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 500 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 558
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 559 SAHTLAWSTSK 569
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 206 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 263
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 264 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 321
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 322 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 376
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 377 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 431 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 490
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 491 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 523
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 201 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 259
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 260 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 319
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 320 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 370
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 371 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 431 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 485
Query: 384 LDR 386
+ R
Sbjct: 486 VRR 488
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 470 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 529
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 530 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 564
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+ G VYA G N+ GQLG+ + + + K + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG + I + +P+ + + +++A G
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPEKVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + + VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVL-TDKVVYAFGLGQFGQLGLGTFLFE----TSEPKVIERIKDQKISYISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G +YT+G +G LG+G
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLG 368
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 142/307 (46%), Gaps = 32/307 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G N+ GQLGLG + G FT KQ + G S
Sbjct: 137 TLVSTDKGSVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPKDNIKQLSAGANTS 190
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G++G +S++ T G + + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-----------GKPISWISCGYYH 239
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + +G +Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPEKVIQVACGGGHTVVLTD 298
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
+Y +G + G LG+G+ S +V + + +SCG HTA +++ G + T+
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTF 357
Query: 365 GWGGSHG 371
G G HG
Sbjct: 358 G-DGRHG 363
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCHMLVF 402
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 20/349 (5%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK- 74
Q +K+ +G K + T+ + A G GRLGLG + + F + K
Sbjct: 460 QRLKVTQVIGGSKSLFAVTMGGKVYAC-GESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL 518
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYH 133
A+ GG H + LT G VY+ G + G+LG +L P +I ++ ++ IS G
Sbjct: 519 AVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRAD-ALTPRKIETFPEKCIRDISCGSS 577
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVA 191
HS+AI G LY WG G+LG G + P P V+ LSG Q A G Q++
Sbjct: 578 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKP--VQALSGQQVVQVACGSRDAQTLC 635
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G V SWG G G+LG G P+ ++ L G V G S
Sbjct: 636 LTQDGLVYSWGDGDFGKLGRGGSDGCC---------VPKPVERLSGQDVVKIECGAQFSL 686
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ G V+ +G ++ H RRP ++ L + +V G H +T GG++
Sbjct: 687 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 746
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
+ WG N++G G G V P +VQG + +++CG H+ A ++
Sbjct: 747 FAWGDNDHGQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFAD 794
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 143/330 (43%), Gaps = 26/330 (7%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATG 96
FA +G G GRLG+GS ES P + + + + ++ GG H L L+ G VY+ G
Sbjct: 1461 FATGYGAG--GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1518
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG P I L+ + +V+++TG HS+AI G LY WGK G+L
Sbjct: 1519 EGVDGKLGHGNRSSLD-HPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1577
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVT----GGGKVLSWGAGGSGRL 209
G ++ P V L A G Q++ +T G V SWG G G+L
Sbjct: 1578 GHEDSEDQLKP--KLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKL 1635
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G S P +I L G + A G S + + G VY +G +
Sbjct: 1636 GRGG---------SDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1686
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+ H RRP LI L + EV G H G++YTWG N+ G +G G+
Sbjct: 1687 LGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQA 1746
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
P R+ + VSCG HT A S
Sbjct: 1747 TQIP-RLVAALQGHHISHVSCGSAHTVAWS 1775
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 25/339 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
+WG D +LG PV ++ + + GG+ +LF +T G VYA G +
Sbjct: 433 VWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQV-IGGSKSLFAVTMGGKVYACGESTS 491
Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG ++ ++ + L +KK + + +G H+ A+T DG +Y WG G+LG
Sbjct: 492 GRLGLGPVTGSVSRLTQVLFPQPIKK--LAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 549
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +A + P K+E + + G S A+ G + +WG G GRLGHG ++
Sbjct: 550 GSRADALTP--RKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 607
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEG 275
L P+ ++ L G +V A G + C+ ++G VY +GD K+
Sbjct: 608 L---------KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 658
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ P + +L + ++ CG + L+ G ++TWG + LG GS + P+
Sbjct: 659 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 718
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
V+G E V V+ G H A++E G++ WG HG
Sbjct: 719 VEG-LREHKVVDVAVGALHCLAVTEGGQVFAWG-DNDHG 755
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 27/336 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P+ C + +LK + GG TLF +T G V+ATG
Sbjct: 1411 WGHNHRGQLGGPEGAKVKIPIPCPSLA--ALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1468
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LGI N ++ L S + Q+S G H A++ +GE+Y WG+ +G+LG G
Sbjct: 1469 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1528
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+++ + P +E L G + A G S A+ G + +WG G GRLGH
Sbjct: 1529 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED----- 1581
Query: 219 GFLRSTSEYTPRLIKEL-EGVKVKIAAA-GFLHSACIDE----NGRVYIFGDRAVDKMLF 272
S + P+L+ L + + V +A G + CI E + V+ +GD K+
Sbjct: 1582 ----SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1637
Query: 273 QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ + P++I L + V CG + L+ G +YTWG + LG GS + +
Sbjct: 1638 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRR 1697
Query: 331 PERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWG 365
P+ ++ V +VS G H AA+ G + TWG
Sbjct: 1698 PKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTWG 1732
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++++WG N QLG K + P+ +K L + Q G + AVT GGKV +
Sbjct: 429 AKVFVWGLNDKDQLGGLKGSKHKTPVASKD--LQRLKVTQVIGGSKSLFAVTMGGKVYAC 486
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SGRLG G + + R T P+ IK+L +G H+ + +G VY
Sbjct: 487 GESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYS 538
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+GD K+ A P I P ++ CG H+ + S G LYTWG G
Sbjct: 539 WGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 598
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWG 367
LG G+ L P+ VQ S V QV+CG + + +G + +WG G
Sbjct: 599 LGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDG 648
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G ++ WG N GQLG G + AKV IPIP L+ + Q G + VTG GKV +
Sbjct: 1406 GSIFGWGHNHRGQLG-GPEGAKVKIPIPCP--SLAALKPIQLVGGEQTLFTVTGEGKVFA 1462
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ P LI+ ++ V + + AG H + G
Sbjct: 1463 TGYGAGGRLGIGSNESVA---------IPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1513
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G+ K+ + P +I L +V GG H+ + + G LYTWG
Sbjct: 1514 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGR 1573
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISE---GKILTWGWG 367
G LG + P+ V ++ V V+CG T I+E G + W WG
Sbjct: 1574 YGRLGHEDSEDQLKPKLVNA-LKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWG 1628
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS E RP + + + ++ G H + + G VY G ND GQ
Sbjct: 1679 WGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQ 1738
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + L + + +S G H+ A ++ E + N + + G K
Sbjct: 1739 IGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESH----NMHKRRRTGAKLP 1794
Query: 163 KVIPI 167
IP+
Sbjct: 1795 DQIPL 1799
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 154/334 (46%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G RP + + +ACG HT +T + +Y G+ +
Sbjct: 152 WGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNS 211
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P R+ G + +V+ ++ G HS+ T +G+LY +G + G LG G
Sbjct: 212 GILGHGTDISHWI-PKRVVGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHG 270
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV------TGGG----KVLSWGAGGSGR 208
+ + V P +V+ LSG+ T + A G + A+ TG K+ +WG G R
Sbjct: 271 DRESVVYP--REVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYR 328
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G A
Sbjct: 329 LGHGNKETYL---------LPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAYG 379
Query: 269 KMLFQEGNHARR---PSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN + P L+ + EE+ CG YHT VLTS E+++WG NG LG
Sbjct: 380 QL----GNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGH 435
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G ++ +P ++ + V +SCG TA+I
Sbjct: 436 GDVEDRKAPTLIEA-LKDRHVKSISCGSNFTASI 468
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 141/314 (44%), Gaps = 30/314 (9%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +ACG H +T G V+ G G+LG + +S L V ++ G
Sbjct: 130 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGE 189
Query: 133 HHSSAITVDGELYMWGKN--SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+H+ AIT +LY WG ++G LG G + IP V L G+ A G S
Sbjct: 190 YHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRV-VGSLEGLQVLSVACGTWHSA 248
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
T GK+ ++G G G LGHG S++ PR ++ L G++ A G H+
Sbjct: 249 LATSNGKLYTFGDGTYGVLGHGDRESVV---------YPREVQLLSGLRTIKVACGVWHT 299
Query: 251 ACIDE----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
A I E + +++ +GD DK GN P+ +S L Y+ ++ CG
Sbjct: 300 AAIVEVMSQTGSNMSSRKLFTWGDG--DKYRLGHGNKETYLLPTCVSSLIDYNFHQLACG 357
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
T LT+ G ++T G G LG S D + P VQ V+++SCG HT +
Sbjct: 358 HNMTVALTTSGHVFTMGGTAYGQLGNPSSDGV-IPCLVQDRLVGEFVEEISCGAYHTVVL 416
Query: 357 -SEGKILTWGWGGS 369
S ++ +WG G +
Sbjct: 417 TSRNEVFSWGRGSN 430
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 122/273 (44%), Gaps = 32/273 (11%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V QI+ G H + +T GE++ WG+ G+LG G + P VE L+ A
Sbjct: 129 DVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHG--IDRDFSRPHLVEFLAVSHVDFVA 186
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKV 240
G + A+T + +WG G SG LGHG + S + P R++ LEG++V
Sbjct: 187 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTD---------ISHWIPKRVVGSLEGLQV 237
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVVCGG 297
A G HSA NG++Y FGD + + + R L+S L + +V CG
Sbjct: 238 LSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGV 296
Query: 298 YHTCVLT----------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+HT + S +L+TWG + LG G+ + P V + Q++
Sbjct: 297 WHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSS-LIDYNFHQLA 355
Query: 348 CGWKHTAAI-SEGKILTWGWG--GSHGTFSEDG 377
CG T A+ + G + T G G G S DG
Sbjct: 356 CGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDG 388
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 109/251 (43%), Gaps = 33/251 (13%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ L L + IP+ P +E + +Q A G VT
Sbjct: 88 GDVYVWGEIWT-DLVLPDGTSSQIPVKNDVLTPKPLETNVVLDVQQIACGVRHIALVTRQ 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG + F R P L++ L V A G H+ I
Sbjct: 147 GEVFTWGEECGGRLGHGIDRD---FSR------PHLVEFLAVSHVDFVACGEYHTCAITS 197
Query: 256 NGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ +Y +GD + + G +H ++ L + V CG +H+ + TS G+LY
Sbjct: 198 SNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSNGKLY 257
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
T+G G LG G + + P VQ S +V+CG HTAAI E
Sbjct: 258 TFGDGTYGVLGHGDRESVVYPREVQL-LSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSR 316
Query: 360 KILTWGWGGSH 370
K+ TWG G +
Sbjct: 317 KLFTWGDGDKY 327
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
S + R WG+GD RLG G+ E+ P S+ ++ LACG T+ LT +G V
Sbjct: 311 SNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHV 370
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ G +GQLG + G ++ + + V +IS G +H+ +T E++ WG+ SN
Sbjct: 371 FTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSN 430
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
G+LG G + PT +E L K + G F S+ +
Sbjct: 431 GRLGHGDVEDR--KAPTLIEALKDRHVKSISCGSNFTASICI 470
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 19/270 (7%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P ++ + CG YH+ +T+ G+LYT+G E G LG+ + +++ R+ P
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRMPQPVP 239
Query: 340 ESP--VDQVSCGWKHTAAISEGKILTWGWG 367
P V QV+CG HT ++E + T+G G
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 142/307 (46%), Gaps = 32/307 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G T+ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQIG---------LENVTNVCVPQQV--TVGKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
+YT+G + G LG+G+ S + + + ++CG HTA I++ G + T+
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTF 319
Query: 365 GWGGSHG 371
G G HG
Sbjct: 320 G-DGRHG 325
>gi|262193493|ref|YP_003264702.1| alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
gi|262076840|gb|ACY12809.1| Alpha-tubulin suppressor and related RCC1 domain- containing
protein-like protein [Haliangium ochraceum DSM 14365]
Length = 817
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 155/354 (43%), Gaps = 35/354 (9%)
Query: 43 WGNGDYGRLGLGSLE-----SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATG 96
WG YG+LG G+L+ + P + L G HT L E+G +Y G
Sbjct: 443 WGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPARQLVAGYDHTCALLESGLIYCWG 502
Query: 97 LNDFGQLGIS--ENIGYSLEPLRISG---LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
N+FGQLG + +N+G EP+ +G L +I+ G +H+ AI G L WG+N+
Sbjct: 503 KNNFGQLGYNRDDNVGDG-EPVTSAGYVTLGGLATKIAAGGNHTCAILEGGFLRCWGENT 561
Query: 152 NGQLGLGKKAA----KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
GQLGLG + + VE G+ + ALGF + A+ GG + WG G G
Sbjct: 562 YGQLGLGHSNPIGDNENVFAAGNVELGDGVVVEDIALGFSHTCALLAGGGMRCWGYNGHG 621
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG+G + + L + + G KI A G H+ + +N ++ +GD
Sbjct: 622 QLGYGHDDN----LGDNESLETQGNVAVPGPVRKIVAGG-QHTCALLQNNKLRCWGDGGD 676
Query: 268 DKMLFQEGN-----HARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELYTWGS 314
+ + E N + P + + +VV GG HTC L S G L WG+
Sbjct: 677 GRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGADVTDVVAGGAHTCALLSNGALKCWGT 736
Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
NG LG +P + Q++ G +HT A+ S G WG G
Sbjct: 737 GSNGRLGYSDTGNRGTPPALGVDLDGVSAYQIAAGEEHTCALRSNGTARCWGRG 790
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 136/327 (41%), Gaps = 42/327 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISG----LKKEVV 126
L+ + G AHT LT G V G N +GQLG ++IG + L + L +
Sbjct: 421 LRRIVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPAR 480
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTK-VECLSGIFTKQAA 183
Q+ GY H+ A+ G +Y WGKN+ GQLG + P+ + L G+ TK AA
Sbjct: 481 QLVAGYDHTCALLESGLIYCWGKNNFGQLGYNRDDNVGDGEPVTSAGYVTLGGLATKIAA 540
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + A+ GG + WG G+LG G + I + + + ++ +GV V+
Sbjct: 541 -GGNHTCAILEGGFLRCWGENTYGQLGLGHSNPI---GDNENVFAAGNVELGDGVVVEDI 596
Query: 244 AAGFLHSACIDENGRVYIFG------------DRAVDKMLFQEGNHARRPSLISKLPYSE 291
A GF H+ + G + +G D D + + P + K
Sbjct: 597 ALGFSHTCALLAGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNVAVPGPVRK----- 651
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP------ERVQGPFSE----S 341
+V GG HTC L +L WG +G G G + + E G + +
Sbjct: 652 -IVAGGQHTCALLQNNKLRCWGDGGDGRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGA 710
Query: 342 PVDQVSCGWKHTAA-ISEGKILTWGWG 367
V V G HT A +S G + WG G
Sbjct: 711 DVTDVVAGGAHTCALLSNGALKCWGTG 737
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 49/273 (17%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK------------KAAKVIPIPTKVECL 174
+I G H+ +T +G++ WG+N GQLG G A +P+P
Sbjct: 423 RIVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPA--- 479
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-LGFLRSTSEYTPRLIK 233
+Q G++ + A+ G + WG G+LG+ ++ ++ G +++ Y
Sbjct: 480 -----RQLVAGYDHTCALLESGLIYCWGKNNFGQLGYNRDDNVGDGEPVTSAGYV----- 529
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-------------LFQEGNHARR 280
L G+ KIAA G H+ I E G + +G+ ++ +F GN
Sbjct: 530 TLGGLATKIAAGGN-HTCAILEGGFLRCWGENTYGQLGLGHSNPIGDNENVFAAGNVELG 588
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE--RVQGPF 338
++ E++ G HTC L +GG + WG N +G LG G D L E QG
Sbjct: 589 DGVV-----VEDIALGFSHTCALLAGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNV 643
Query: 339 S-ESPVDQVSCGWKHTAA-ISEGKILTWGWGGS 369
+ PV ++ G +HT A + K+ WG GG
Sbjct: 644 AVPGPVRKIVAGGQHTCALLQNNKLRCWGDGGD 676
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 80/196 (40%), Gaps = 26/196 (13%)
Query: 43 WGNGDYGRLGLG---------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG +G+LG G SLE++ V K + GG HT L + +
Sbjct: 615 WGYNGHGQLGYGHDDNLGDNESLETQGNVAVPGPVRK-----IVAGGQHTCALLQNNKLR 669
Query: 94 ATGLNDFGQLGISE----NIGYSLEP-------LRISGLKKEVVQISTGYHHSSAITVDG 142
G G+ G E N Y +P L +V + G H+ A+ +G
Sbjct: 670 CWGDGGDGRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGADVTDVVAGGAHTCALLSNG 729
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
L WG SNG+LG + P V+ L G+ Q A G E + A+ G WG
Sbjct: 730 ALKCWGTGSNGRLGYSDTGNRGTPPALGVD-LDGVSAYQIAAGEEHTCALRSNGTARCWG 788
Query: 203 AGGSGRLGHGQESSIL 218
G SGRLG G E+ IL
Sbjct: 789 RGLSGRLGSGSEADIL 804
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 125/327 (38%), Gaps = 69/327 (21%)
Query: 20 LGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG 79
L +K+ + L+ F WG YG+LGLG
Sbjct: 534 LATKIAAGGNHTCAILEGGFLRCWGENTYGQLGLG------------------------- 568
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
H+ + + V+A G + G + E+ I+ G+ H+ A+
Sbjct: 569 --HSNPIGDNENVFAAGNVELGDGVVVED-------------------IALGFSHTCALL 607
Query: 140 VDGELYMWGKNSNGQLGLGK----------KAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + WG N +GQLG G + + +P V ++ G + +
Sbjct: 608 AGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNVAVPGPV--------RKIVAGGQHT 659
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQES-SILGFLRSTSEYTPRLIKELE-GVKVKIAAAGF 247
A+ K+ WG GG GR G+G+ + + + E + +++ G V AG
Sbjct: 660 CALLQNNKLRCWGDGGDGRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGADVTDVVAGG 719
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
H+ + NG + +G + ++ + + GN P+L L + ++ G HTC L
Sbjct: 720 AHTCALLSNGALKCWGTGSNGRLGYSDTGNRGTPPALGVDLDGVSAYQIAAGEEHTCALR 779
Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSP 331
S G WG +G LG GS + SP
Sbjct: 780 SNGTARCWGRGLSGRLGSGSEADILSP 806
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + L +A GGAH+ +T G +Y G +G+
Sbjct: 4069 WGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4128
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4129 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4186
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4187 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4243
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4244 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4296
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L+ L V CG HT
Sbjct: 4297 RPRLVPALQGKKVNRVACGSAHT 4319
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4029 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4087
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ E+V ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4088 PRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4145
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4146 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4196
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4197 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4256
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4257 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVPALQGKKVNRVACG 4315
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4316 SAHTLAWSTSK 4326
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + +P+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAVP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 20/272 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V PIP +V LS K+ A+
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PIPRQVTALSSYVVKKVAV 3056
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 3057 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 3107
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
A G HSA + +G +Y +G ++ + +P ++ L +V CG
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
T LT G +++WG + G LG G + + P+ ++ + V Q+ CG + + A+++
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTK 3226
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
++ W WG G + GH S + + Q+
Sbjct: 3227 SGVV-WTWG--KGDYFRLGHGSDVHVRKPQVV 3255
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 166/361 (45%), Gaps = 31/361 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3963 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4020
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4021 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4078
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4079 HGNRSP--CDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4133
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4134 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4247
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+VQG V ++ G H +E G++ TWG G G + + R +L P
Sbjct: 4248 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG-DNDEGQL---GDGTTNAIQRPRLVP 4302
Query: 392 S 392
+
Sbjct: 4303 A 4303
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3289
Query: 370 HG 371
HG
Sbjct: 3290 HG 3291
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+LG SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 579 GNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 638
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 639 GRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 697 HV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3958 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4016
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4017 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4076
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G+++ AAG HSAC+ G +Y +G
Sbjct: 4077 LGHGNRSPC---------DRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYG 4127
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4128 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4188 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4242
Query: 384 LDR 386
+ R
Sbjct: 4243 VRR 4245
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
I +P+ E LS + Q A G + AVT GKV + G +GRLG G S + R
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQV 3043
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
+ + ++K KV + + G H+ + +G+V+ +G+ K+ + +P LI
Sbjct: 3044 TALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3097
Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
L ++ CG H+ LTS GELYTWG E G LG G P+ V+
Sbjct: 3098 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR- 3156
Query: 343 VDQVSCGWKHT---AAISEGKILTWGWG 367
V QV+CG + A EG + +WG G
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4227 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4286
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K+V +++ G H+ A
Sbjct: 4287 LGDGTTNAIQ-RPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 79 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 137
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 138 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 195
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 196 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 246
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 247 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 304
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 305 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 33 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 91
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 92 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 151
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 152 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 201
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 202 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 261
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 262 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACH 320
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 321 STHTSAAKTQGGHVYMWG 338
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++ST E PR + L G K+ + G H G V+ +G A ++ N
Sbjct: 83 LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 140
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
H P IS +++V+ CG YH+ VLTS GE++ WG N +G +G GS P R
Sbjct: 141 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRR 200
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
V G V ++CG A+ + G++ WG+ G+
Sbjct: 201 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 237
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 231 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 290
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 291 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 343
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 344 --SVILPHLTHFSCTDDVF 360
>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1103
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 151/334 (45%), Gaps = 34/334 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLND 99
WG GRLG G + + P +V S S+ +ACG HT +T G +Y G ++
Sbjct: 305 WGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364
Query: 100 FGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG +I + + P RI+G + V +S G H++ IT G L+ +G + G LG
Sbjct: 365 VGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGH 423
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G K + + P +VE LSG+ T + G + AV GK+ +WG G
Sbjct: 424 GDK--ETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGD 481
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + L P + L A G + + +G+V+ G
Sbjct: 482 KNRLGHGDKDPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGS- 531
Query: 266 AVDKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
V L + P L+ KL + EE+ CG YH LTS E+YTWG NG LG
Sbjct: 532 TVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGH 591
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G ++ P V+ + V ++CG +TAAI
Sbjct: 592 GDLEDRKVPTIVEA-LKDRHVKYIACGSNYTAAI 624
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 35/315 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL--KKEVVQISTG 131
+ACG H F+T G ++ G G+L GI +++ P + L V ++ G
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV---FHPRLVESLTATSSVDFVACG 342
Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H+ A+T+ GELY WG ++ G LG G + IP L G+ + G +
Sbjct: 343 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP-KRIAGSLEGLHVASVSCGPWHT 401
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G++ ++G G G LGHG + ++ +Y PR ++ L G++ + G H
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETV--------QY-PREVESLSGLRTIAVSCGVWH 452
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
+A + E +G+++ +GD +++ + + +P+ + L Y+ ++ C
Sbjct: 453 TAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC 512
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G T LT+ G+++T GS G LG D P V+ + V+++SCG H AA
Sbjct: 513 GHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDG-KLPCLVEDKLASEFVEEISCGAYHVAA 571
Query: 356 I-SEGKILTWGWGGS 369
+ S ++ TWG G +
Sbjct: 572 LTSRNEVYTWGKGAN 586
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 98 NDFGQLGISENIGYSL--------EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
++ ++GI +N Y +PL S + +V QI+ G H++ +T GE++ WG+
Sbjct: 249 DNVVKVGIDKNASYLTTRTDVLVPKPLE-SNIVLDVHQIACGVRHAAFVTRQGEIFTWGE 307
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAG--GS 206
S G+LG G K + P VE L+ + A G + AVT G++ +WG G
Sbjct: 308 ESGGRLGHG--IGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNV 365
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G LGHG + S + P+ I LEG+ V + G H+A I GR++ FGD
Sbjct: 366 GLLGHGSD---------ISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDG 416
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS------------GGELYT 311
+ + + P + L + V CG +HT + G+L+T
Sbjct: 417 TFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFT 476
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG--G 368
WG + LG G D P V + +++CG T + + G++ T G G
Sbjct: 477 WGDGDKNRLGHGDKDPRLKPTCVPA-LIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYG 535
Query: 369 SHGTFSEDG 377
G DG
Sbjct: 536 QLGNLQTDG 544
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
+++ R WG G GRLG G LE R P + A + +K +ACG +T
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYT 621
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 154/334 (46%), Gaps = 37/334 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G RP + + +ACG HT +T + +Y G+ +
Sbjct: 290 WGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNS 349
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P R+ G + +V+ ++ G HS+ T +G+LY +G + G LG G
Sbjct: 350 GILGHGTDISHWI-PKRVVGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHG 408
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV------TGGG----KVLSWGAGGSGR 208
+ + V P +V+ LSG+ T + A G + A+ TG K+ +WG G R
Sbjct: 409 DRESVVYP--REVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYR 466
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G A
Sbjct: 467 LGHGNKETYL---------LPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAYG 517
Query: 269 KMLFQEGNHARR---PSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN + P L+ + EE+ CG YHT VLTS E+++WG NG LG
Sbjct: 518 QL----GNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGH 573
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G ++ +P ++ + V +SCG TA+I
Sbjct: 574 GDVEDRKAPTLIEA-LKDRHVKSISCGSNFTASI 606
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 141/314 (44%), Gaps = 30/314 (9%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +ACG H +T G V+ G G+LG + +S L V ++ G
Sbjct: 268 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGE 327
Query: 133 HHSSAITVDGELYMWGKN--SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+H+ AIT +LY WG ++G LG G + IP V L G+ A G S
Sbjct: 328 YHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRV-VGSLEGLQVLSVACGTWHSA 386
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
T GK+ ++G G G LGHG S++ PR ++ L G++ A G H+
Sbjct: 387 LATSNGKLYTFGDGTYGVLGHGDRESVV---------YPREVQLLSGLRTIKVACGVWHT 437
Query: 251 ACIDE----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
A I E + +++ +GD DK GN P+ +S L Y+ ++ CG
Sbjct: 438 AAIVEVMSQTGSNMSSRKLFTWGDG--DKYRLGHGNKETYLLPTCVSSLIDYNFHQLACG 495
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
T LT+ G ++T G G LG S D + P VQ V+++SCG HT +
Sbjct: 496 HNMTVALTTSGHVFTMGGTAYGQLGNPSSDGV-IPCLVQDRLVGEFVEEISCGAYHTVVL 554
Query: 357 -SEGKILTWGWGGS 369
S ++ +WG G +
Sbjct: 555 TSRNEVFSWGRGSN 568
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 122/273 (44%), Gaps = 32/273 (11%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V QI+ G H + +T GE++ WG+ G+LG G + P VE L+ A
Sbjct: 267 DVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHG--IDRDFSRPHLVEFLAVSHVDFVA 324
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKV 240
G + A+T + +WG G SG LGHG + S + P R++ LEG++V
Sbjct: 325 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTD---------ISHWIPKRVVGSLEGLQV 375
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVVCGG 297
A G HSA NG++Y FGD + + + R L+S L + +V CG
Sbjct: 376 LSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGV 434
Query: 298 YHTCVLT----------SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
+HT + S +L+TWG + LG G+ + P V + Q++
Sbjct: 435 WHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSS-LIDYNFHQLA 493
Query: 348 CGWKHTAAI-SEGKILTWGWG--GSHGTFSEDG 377
CG T A+ + G + T G G G S DG
Sbjct: 494 CGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDG 526
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 109/251 (43%), Gaps = 33/251 (13%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ L L + IP+ P +E + +Q A G VT
Sbjct: 226 GDVYVWGEIWT-DLVLPDGTSSQIPVKNDVLTPKPLETNVVLDVQQIACGVRHIALVTRQ 284
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG + F R P L++ L V A G H+ I
Sbjct: 285 GEVFTWGEECGGRLGHGIDRD---FSR------PHLVEFLAVSHVDFVACGEYHTCAITS 335
Query: 256 NGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ +Y +GD + + G +H ++ L + V CG +H+ + TS G+LY
Sbjct: 336 SNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSNGKLY 395
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
T+G G LG G + + P VQ S +V+CG HTAAI E
Sbjct: 396 TFGDGTYGVLGHGDRESVVYPREVQL-LSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSR 454
Query: 360 KILTWGWGGSH 370
K+ TWG G +
Sbjct: 455 KLFTWGDGDKY 465
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
S + R WG+GD RLG G+ E+ P S+ ++ LACG T+ LT +G V
Sbjct: 449 SNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHV 508
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ G +GQLG + G ++ + + V +IS G +H+ +T E++ WG+ SN
Sbjct: 509 FTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSN 568
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
G+LG G + PT +E L K + G F S+ +
Sbjct: 569 GRLGHGDVEDR--KAPTLIEALKDRHVKSISCGSNFTASICI 608
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H + GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4313 SAHTLAWSTSK 4323
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4018
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4019 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4077 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4130
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4185
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 4186 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4245
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V ++ G H SE G++ TWG
Sbjct: 4246 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4277
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 121/303 (39%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G +V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4239
Query: 384 LDR 386
+ R
Sbjct: 4240 VRR 4242
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 31/303 (10%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVV 126
+K + ++ G H L L+ G + YS+E R + +K ++
Sbjct: 5 KKMKIHSVDQGAEHMLILSSDGKPF--------------EYNYSIEHARFQCILQEKSII 50
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QI+ G +HS A++ GEL+ WG+N +GQLG+G+ A IP P VE LSG+ Q + G
Sbjct: 51 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFAS-IPTPQLVEHLSGVPLVQISAGK 109
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A++ G + SWG G+LG G + E P L++ L+ KV+ A G
Sbjct: 110 AHSMALSMSGNIYSWGRNDLGQLGLGH---------TDGEEFPSLVEALDSQKVEFLACG 160
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
H+A + E+G+V+ FG ++ + RP L+++L +V CG HT
Sbjct: 161 GSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYV 220
Query: 305 SG-GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK--I 361
S G+++++GS + G LG G P ++ P +E + K I+ G I
Sbjct: 221 SDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAGGNQSI 280
Query: 362 LTW 364
L W
Sbjct: 281 LLW 283
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVV 126
++ S+ + CG H+L L++ G ++A G N GQLGI P + L +V
Sbjct: 44 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLV 103
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QIS G HS A+++ G +Y WG+N GQLGLG + P+ VE L + A G
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGE--EFPSLVEALDSQKVEFLACGG 161
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ +T G+V ++GAG G+LGH + +E PRL+ EL G++V A G
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNS---------TQNELRPRLVTELTGIRVTQVACG 212
Query: 247 FLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
H+ A + + G+V+ FG + L G H + L KLP +E++
Sbjct: 213 RRHTLAYVSDLGKVFSFGS-GKEGQLGNGGTHNQLIPLPMKLPSNEDL 259
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G L S P + L ++ G AH++ L+ +G +Y+ G ND G
Sbjct: 71 WGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLG 130
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G P + L + V+ ++ G H++ +T DG+++ +G +GQLG
Sbjct: 131 QLGLGHTDGEEF-PSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNST 189
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+GI Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 190 QNEL--RPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 240
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG + P + A + ++ LACGG+HT LTE G V+ G GQ
Sbjct: 124 WGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQ 183
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V Q++ G H+ A D G+++ +G GQLG G
Sbjct: 184 LG-HNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGT 242
Query: 161 AAKVIPIPTKV 171
++IP+P K+
Sbjct: 243 HNQLIPLPMKL 253
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGW 350
++ CG YH+ L+ GGEL+ WG N +G LGIG + + +P+ V+ S P+ Q+S G
Sbjct: 51 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEH-LSGVPLVQISAGK 109
Query: 351 KHTAAIS-EGKILTWG 365
H+ A+S G I +WG
Sbjct: 110 AHSMALSMSGNIYSWG 125
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 64/211 (30%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G S+A++ GG++ +WG G+LG G+ + + TP+L++ L GV +
Sbjct: 51 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIP--------TPQLVEHLSGVPL 102
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
++ G H+
Sbjct: 103 V--------------------------------------------------QISAGKAHS 112
Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
L+ G +Y+WG N+ G LG+G D P V+ S+ V+ ++CG HTA ++E G
Sbjct: 113 MALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQK-VEFLACGGSHTALLTEDG 171
Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
++ T+G G HG GH+S R +L
Sbjct: 172 QVFTFG-AGKHGQL---GHNSTQNELRPRLV 198
>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
Length = 1103
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 151/334 (45%), Gaps = 34/334 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLND 99
WG GRLG G + + P +V S S+ +ACG HT +T G +Y G ++
Sbjct: 305 WGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364
Query: 100 FGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG +I + + P RI+G + V +S G H++ IT G L+ +G + G LG
Sbjct: 365 VGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGH 423
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G K + + P +VE LSG+ T + G + AV GK+ +WG G
Sbjct: 424 GDK--ETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGD 481
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + L P + L A G + + +G+V+ G
Sbjct: 482 KNRLGHGDKDPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGS- 531
Query: 266 AVDKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
V L + P L+ KL + EE+ CG YH LTS E+YTWG NG LG
Sbjct: 532 TVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGH 591
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G ++ P V+ + V ++CG +TAAI
Sbjct: 592 GDLEDRKVPTIVEA-LKDRHVKYIACGSNYTAAI 624
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 35/315 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL--KKEVVQISTG 131
+ACG H F+T G ++ G G+L GI +++ P + L V ++ G
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV---FHPRLVESLTATSSVDFVACG 342
Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H+ A+T+ GELY WG ++ G LG G + IP L G+ + G +
Sbjct: 343 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP-KRIAGSLEGLHVASVSCGPWHT 401
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G++ ++G G G LGHG + ++ +Y PR ++ L G++ + G H
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETV--------QY-PREVESLSGLRTIAVSCGVWH 452
Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
+A + E +G+++ +GD +++ + + +P+ + L Y+ ++ C
Sbjct: 453 TAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC 512
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G T LT+ G+++T GS G LG D P V+ + V+++SCG H AA
Sbjct: 513 GHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDG-KLPCLVEDKLASEFVEEISCGAYHVAA 571
Query: 356 I-SEGKILTWGWGGS 369
+ S ++ TWG G +
Sbjct: 572 LTSRNEVYTWGKGAN 586
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 98 NDFGQLGISENIGYSL--------EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
++ ++GI +N Y +PL S + +V QI+ G H++ +T GE++ WG+
Sbjct: 249 DNVVKVGIDKNASYLTTRTDVLVPKPLE-SNIVLDVHQIACGVRHAAFVTRQGEIFTWGE 307
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAG--GS 206
S G+LG G K + P VE L+ + A G + AVT G++ +WG G
Sbjct: 308 ESGGRLGHG--IGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNV 365
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G LGHG + S + P+ I LEG+ V + G H+A I GR++ FGD
Sbjct: 366 GLLGHGSD---------ISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDG 416
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS------------GGELYT 311
+ + + P + L + V CG +HT + G+L+T
Sbjct: 417 TFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFT 476
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG--G 368
WG + LG G D P V + +++CG T + + G++ T G G
Sbjct: 477 WGDGDKNRLGHGDKDPRLKPTCVPA-LIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYG 535
Query: 369 SHGTFSEDG 377
G DG
Sbjct: 536 QLGNLQTDG 544
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
+++ R WG G GRLG G LE R P + A + +K +ACG +T
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYT 621
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 159/361 (44%), Gaps = 32/361 (8%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I+ T ++ WG GRLG G+ RP + A +
Sbjct: 237 LESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSN 296
Query: 73 LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
++ +ACG HT +T +G +Y G + G LG + L P R+SG + +V+ +
Sbjct: 297 VEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWL-PKRVSGPLEGVQVLSV 355
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS+ T G+++ +G + G LG G + + P +VE LSG T + A G
Sbjct: 356 SCGSWHSALTTSSGKVFTFGDGTFGALGHGNR--HTVAYPKEVETLSGFRTIKVACGLWH 413
Query: 189 SVAVTG----------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ K+ +WGAG LGHG + + L P ++ L
Sbjct: 414 SAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARL---------VPTCVQSLIDY 464
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVC 295
A G + + +G V+ G + + L + + P+ + EE+ C
Sbjct: 465 NFHQVACGHSMTIALSTSGHVFTMGSSS-NGQLGNPKSDGKHPTPVQDRLAGELVEEISC 523
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
G H VLTS E+YTWG NG LG G ++ P V+ + V ++CG T
Sbjct: 524 GSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEA-LKDRHVKSIACGSNFTTC 582
Query: 356 I 356
I
Sbjct: 583 I 583
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 139/313 (44%), Gaps = 28/313 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +ACG H T G V+A G G+LG + S L + V ++ G
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGE 304
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
H+ AIT G+LY WG LG A +P +V L G+ + G S
Sbjct: 305 FHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSAL 364
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T GKV ++G G G LGHG R T Y P+ ++ L G + A G HSA
Sbjct: 365 TTSSGKVFTFGDGTFGALGHGN--------RHTVAY-PKEVETLSGFRTIKVACGLWHSA 415
Query: 252 CIDENG----------RVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGG 297
I E +++ +G A DK G+ R P+ + L Y+ +V CG
Sbjct: 416 AIVETTNQAGVNVISRKLFTWG--AGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGH 473
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
T L++ G ++T GS+ NG LG D H P VQ + V+++SCG H A +
Sbjct: 474 SMTIALSTSGHVFTMGSSSNGQLGNPKSDGKH-PTPVQDRLAGELVEEISCGSCHVAVLT 532
Query: 357 SEGKILTWGWGGS 369
S ++ TWG G +
Sbjct: 533 SRSEVYTWGMGAN 545
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 142 GELYMWGKNSNGQLG-------LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ + L KA +IP P + + + + +Q A G+ T
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLCSKADILIPKPLESDVVLDV--QQIACGYRHIALTTR 260
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG ++ I P+L++ L V+ A G H+ I
Sbjct: 261 QGEVFAWGEELGGRLGHGTDADI---------SRPKLVEALAVSNVEYVACGEFHTCAIT 311
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGEL 309
+G +Y +GD + L G P +S +V+ CG +H+ + TS G++
Sbjct: 312 ASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKV 371
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG---------- 359
+T+G G LG G+ + P+ V+ S +V+CG H+AAI E
Sbjct: 372 FTFGDGTFGALGHGNRHTVAYPKEVET-LSGFRTIKVACGLWHSAAIVETTNQAGVNVIS 430
Query: 360 -KILTWGWG 367
K+ TWG G
Sbjct: 431 RKLFTWGAG 439
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4005 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4065 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4123 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4180 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4232
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4233 RPRLVAALQGKKVNRVACGSAHT 4255
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2954 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3013
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3014 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3072
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3073 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3124 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3183
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3184 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3239
Query: 386 RGQLT 390
+ Q+
Sbjct: 3240 KPQVV 3244
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3010 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3070 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3129 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3182
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3183 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3237
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3238 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3297
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3298 G-LEGQKITRVACGSSHSVA 3316
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4023
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4024 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4081
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4082 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4132
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4133 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4192
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4193 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4251
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4252 SAHTLAWSTSK 4262
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3064 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3124 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3182 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3239 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3287
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3288 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3319
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2992 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3051
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3052 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3109
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3110 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3160
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3161 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3220
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3221 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3278
Query: 370 HG 371
HG
Sbjct: 3279 HG 3280
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 19/258 (7%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG G ++ P +E
Sbjct: 3973 LESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIE 4028
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L GI A G S VT G + +WG G GRLGH S + P+L+
Sbjct: 4029 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---------SEDQLKPKLV 4079
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY- 289
+ L+G +V A +G + C+ ++ V+ +GD K+ + + P I L
Sbjct: 4080 EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4139
Query: 290 -SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+V CG + LT G +YTWG + LG GS D + P +VQG V ++
Sbjct: 4140 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIAT 4198
Query: 349 GWKHTAAISE-GKILTWG 365
G H +E G++ TWG
Sbjct: 4199 GSLHCVCCTEDGEVYTWG 4216
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2946 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3003
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3057
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3058 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3117
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3118 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3173
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4163 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4222
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4223 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4257
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
V GG H L+S GE+Y+WG E+G LG G+ P ++ VD V+ G H
Sbjct: 3986 VNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD-VAAGGAH 4044
Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+A ++ G + TWG G + GHS QL P
Sbjct: 4045 SACVTAAGDLYTWG----KGRYGRLGHSDS----EDQLKP 4076
>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 444
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 136/286 (47%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ PV + +KA+A G +L L G V+A G N +GQ
Sbjct: 95 WGSNKYGQLGDGTYNDSAGPVQVAGLT--GVKAIAAGKDISLALKGDGTVWAWGSNSYGQ 152
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+G S N + P+++ GL + IS G H A DG ++ WG N +G LG G
Sbjct: 153 VGEGSLNYKGTAVPIQVKGL-NNIQAISAGGSHCLASQGDGAVWAWGDNRHGVLGDGTNE 211
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES----SI 217
++ P+ +K+ + G+ A ++AV G V SWG +G+LG G S
Sbjct: 212 SRFTPVRSKIYNVMGLDAGDA-----HALAVMVDGNVWSWGYNYNGQLGMGGTSLNDLGR 266
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
L F + P +++ L GVK A G HS + +NG V+ +G + ++ + G
Sbjct: 267 LSFGPEADSFNPDIVRGLSGVKS--VAVGASHSVALADNGTVWTWGSNSDGQLGVGKTGG 324
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P +S + V G YHT L G ++ WGSN G +G
Sbjct: 325 SDMTVPVRVSGINGITAVDAGLYHTLALKDDGSVWAWGSNAEGQVG 370
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 147/333 (44%), Gaps = 17/333 (5%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
E ++ +A G H L L G V+A G N +GQLG S P++++GL V
Sbjct: 68 VEISVVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLG-DGTYNDSAGPVQVAGLTG-VKA 125
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G S A+ DG ++ WG NS GQ+G G K +P +V+ L+ I A G
Sbjct: 126 IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNIQAISA--GGS 183
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+A G G V +WG G LG G S +RS Y + + + + G
Sbjct: 184 HCLASQGDGAVWAWGDNRHGVLGDGTNESRFTPVRS-KIYNVMGLDAGDAHALAVMVDGN 242
Query: 248 LHSACIDENGRVYIFGDRAVD--KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
+ S + NG++ + G D ++ F + P ++ L + V G H+ L
Sbjct: 243 VWSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGASHSVALAD 302
Query: 306 GGELYTWGSNENGCLGIGSI--DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
G ++TWGSN +G LG+G + P RV G + VD G HT A+ + +
Sbjct: 303 NGTVWTWGSNSDGQLGVGKTGGSDMTVPVRVSGINGITAVD---AGLYHTLALKDDGSV- 358
Query: 364 WGWG----GSHGTFSEDGHSSGGQLDRGQLTPS 392
W WG G G S S L + Q+ PS
Sbjct: 359 WAWGSNAEGQVGNRSASAGSPALVLMQTQILPS 391
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G LG G+ ESR+ PV + L A G AH L + G V++ G N GQ
Sbjct: 197 WGDNRHGVLGDGTNESRFTPVRSKIYNVMGLDA---GDAHALAVMVDGNVWSWGYNYNGQ 253
Query: 103 LGIS----ENIGY--------SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
LG+ ++G S P + GL V ++ G HS A+ +G ++ WG N
Sbjct: 254 LGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSG-VKSVAVGASHSVALADNGTVWTWGSN 312
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S+GQLG+GK + +P +V ++GI A G ++A+ G V +WG+ G++G
Sbjct: 313 SDGQLGVGKTGGSDMTVPVRVSGINGITAVDA--GLYHTLALKDDGSVWAWGSNAEGQVG 370
Query: 211 HGQESSILGFLRSTSEYTPRLI 232
+ RS S +P L+
Sbjct: 371 N----------RSASAGSPALV 382
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 30/252 (11%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
++ VV I+ S A+ DG ++ WG S+G P KVE
Sbjct: 24 VTAWSPAVVSIAASNSTSVALLDDGTVWQWGYVSDG---------VEYATPQKVEIS--- 71
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
++ A G+ +A+ G G V +WG+ G+LG G + G P + L G
Sbjct: 72 VVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAG---------PVQVAGLTG 122
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVC 295
VK AAG S + +G V+ +G + ++ N+ P + L + +
Sbjct: 123 VKA--IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNIQAISA 180
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
GG H G ++ WG N +G LG G+ + +P R + V + G H A
Sbjct: 181 GGSHCLASQGDGAVWAWGDNRHGVLGDGTNESRFTPVRSK----IYNVMGLDAGDAHALA 236
Query: 356 IS-EGKILTWGW 366
+ +G + +WG+
Sbjct: 237 VMVDGNVWSWGY 248
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 20/349 (5%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK- 74
Q +K+ +G K + T+ + A G GRLGLG + + F + K
Sbjct: 461 QRLKVTQVIGGSKSLFAVTMGGKVYAC-GESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL 519
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYH 133
A+ GG H + LT G VY+ G + G+LG +L P +I ++ ++ IS G
Sbjct: 520 AVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRAD-ALTPRKIETFPEKCIRDISCGSS 578
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVA 191
HS+AI G LY WG G+LG G + P P V+ LSG Q A G Q++
Sbjct: 579 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKP--VQALSGQQVVQVACGSRDAQTLC 636
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G V SWG G G+LG G P+ ++ L G V G S
Sbjct: 637 LTQDGLVYSWGDGDFGKLGRGGSDGCC---------VPKPVERLSGQDVVKIECGAQFSL 687
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ G V+ +G ++ H RRP ++ L + +V G H +T GG++
Sbjct: 688 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 747
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
+ WG N++G G G V P +VQG + +++CG H+ A ++
Sbjct: 748 FAWGDNDHGQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFAD 795
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 143/330 (43%), Gaps = 26/330 (7%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATG 96
FA +G G GRLG+GS ES P + + + + ++ GG H L L+ G VY+ G
Sbjct: 1462 FATGYGAG--GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1519
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG P I L+ + +V+++TG HS+AI G LY WGK G+L
Sbjct: 1520 EGVDGKLGHGNRSSLD-HPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1578
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVT----GGGKVLSWGAGGSGRL 209
G ++ P V L A G Q++ +T G V SWG G G+L
Sbjct: 1579 GHEDSEDQLKP--KLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKL 1636
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G S P +I L G + A G S + + G VY +G +
Sbjct: 1637 GRGG---------SDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1687
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
+ H RRP LI L + EV G H G++YTWG N+ G +G G+
Sbjct: 1688 LGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQA 1747
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
P R+ + VSCG HT A S
Sbjct: 1748 TQIP-RLVAALQGHHISHVSCGSAHTVAWS 1776
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 25/339 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
+WG D +LG PV ++ + + GG+ +LF +T G VYA G +
Sbjct: 434 VWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQV-IGGSKSLFAVTMGGKVYACGESTS 492
Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG ++ ++ + L +KK + + +G H+ A+T DG +Y WG G+LG
Sbjct: 493 GRLGLGPVTGSVSRLTQVLFPQPIKK--LAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 550
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +A + P K+E + + G S A+ G + +WG G GRLGHG ++
Sbjct: 551 GSRADALTP--RKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 608
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEG 275
L P+ ++ L G +V A G + C+ ++G VY +GD K+
Sbjct: 609 L---------KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 659
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ P + +L + ++ CG + L+ G ++TWG + LG GS + P+
Sbjct: 660 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 719
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
V+G E V V+ G H A++E G++ WG HG
Sbjct: 720 VEG-LREHKVVDVAVGALHCLAVTEGGQVFAWG-DNDHG 756
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 27/336 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P+ C + +LK + GG TLF +T G V+ATG
Sbjct: 1412 WGHNHRGQLGGPEGAKVKIPIPCPSLA--ALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1469
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LGI N ++ L S + Q+S G H A++ +GE+Y WG+ +G+LG G
Sbjct: 1470 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1529
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+++ + P +E L G + A G S A+ G + +WG G GRLGH
Sbjct: 1530 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED----- 1582
Query: 219 GFLRSTSEYTPRLIKEL-EGVKVKIAAA-GFLHSACIDE----NGRVYIFGDRAVDKMLF 272
S + P+L+ L + + V +A G + CI E + V+ +GD K+
Sbjct: 1583 ----SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1638
Query: 273 QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
+ + P++I L + V CG + L+ G +YTWG + LG GS + +
Sbjct: 1639 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRR 1698
Query: 331 PERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWG 365
P+ ++ V +VS G H AA+ G + TWG
Sbjct: 1699 PKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTWG 1733
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++++WG N QLG K + P+ +K L + Q G + AVT GGKV +
Sbjct: 430 AKVFVWGLNDKDQLGGLKGSKHKTPVASKD--LQRLKVTQVIGGSKSLFAVTMGGKVYAC 487
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SGRLG G + + R T P+ IK+L +G H+ + +G VY
Sbjct: 488 GESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYS 539
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+GD K+ A P I P ++ CG H+ + S G LYTWG G
Sbjct: 540 WGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 599
Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWG 367
LG G+ L P+ VQ S V QV+CG + + +G + +WG G
Sbjct: 600 LGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDG 649
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G ++ WG N GQLG G + AKV IPIP L+ + Q G + VTG GKV +
Sbjct: 1407 GSIFGWGHNHRGQLG-GPEGAKVKIPIPCP--SLAALKPIQLVGGEQTLFTVTGEGKVFA 1463
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGR 258
G G GRLG G S+ P LI+ ++ V + + AG H + G
Sbjct: 1464 TGYGAGGRLGIGSNESVA---------IPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1514
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G+ K+ + P +I L +V GG H+ + + G LYTWG
Sbjct: 1515 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGR 1574
Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISE---GKILTWGWG 367
G LG + P+ V ++ V V+CG T I+E G + W WG
Sbjct: 1575 YGRLGHEDSEDQLKPKLVNA-LKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWG 1629
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS E RP + + + ++ G H + + G VY G ND GQ
Sbjct: 1680 WGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQ 1739
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + L + + +S G H+ A ++ E + N + + G K
Sbjct: 1740 IGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESH----NMHKRRRTGAKLP 1795
Query: 163 KVIPI 167
IP+
Sbjct: 1796 DQIPL 1800
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 50/344 (14%)
Query: 49 GRLGLGSLESRWRP--VVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G LGLG L ++ P +V + F+ K + +++CG HTL LT+ G VYA G N +GQLG+
Sbjct: 387 GCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDYG-VYAWGSNTYGQLGL 445
Query: 106 SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK----K 160
I S P I+ L K++VQ+S G +H+ A++ GE+Y WG +GQLG G
Sbjct: 446 GPLIQESPYPQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIY 505
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K++P KV Q A G S+ +T GK+ +G+ G+L + Q
Sbjct: 506 YPKLLPFQHKVV--------QVAAGHAHSLILTREGKLFGFGSNVFGQLEYCQ------- 550
Query: 221 LRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L S P LI + + I A G+ H+ + + VY +G + + Q N
Sbjct: 551 LDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYTWGASPQEVRILQSKNLQ 610
Query: 279 RRPSLISKLPYS----------------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L K P S E+VV G H+ +L +G L WG N++ L
Sbjct: 611 KQNGLSLKGPDSWKASVHIYSGGNKKPIEQVVVGYRHSVILHNGKLL--WGKNKDDELSP 668
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
++ ++ F VSCG +T AI GK+L WG
Sbjct: 669 PKLN-----DKDNISFFAHKFIHVSCGLDYTMAIDHAGKLLAWG 707
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 152/316 (48%), Gaps = 37/316 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQI 128
L L+CG H + C+Y G++ G LG+ + S P + LK +V+ +
Sbjct: 359 DLHHLSCGFEHAA-VVRNSCLYTMGVSSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSV 417
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H+ A+T D +Y WG N+ GQLGLG + P P + L+ Q + G
Sbjct: 418 SCGRKHTLALT-DYGVYAWGSNTYGQLGLGPLIQES-PYPQIITNLAFKKMVQVSAGQYH 475
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
++A++ G+V +WG G G+LGHG +I Y P+L+ KV AAG
Sbjct: 476 TIALSSSGEVYTWGWGIHGQLGHGDCDNI---------YYPKLLPFQH--KVVQVAAGHA 524
Query: 249 HSACIDENGRVYIFGDRAVDKMLF--QEGNHARRPSLISKLP--YS--EEVVCGGYHTCV 302
HS + G+++ FG ++ + + N + RP LI +P Y+ E++ G +H
Sbjct: 525 HSLILTREGKLFGFGSNVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIA 584
Query: 303 LTSGGELYTWGSNENGCLGIGSIDV-------LHSPERVQGPF------SESPVDQVSCG 349
+ + E+YTWG++ + S ++ L P+ + ++ P++QV G
Sbjct: 585 VRADQEVYTWGASPQEVRILQSKNLQKQNGLSLKGPDSWKASVHIYSGGNKKPIEQVVVG 644
Query: 350 WKHTAAISEGKILTWG 365
++H+ + GK+L WG
Sbjct: 645 YRHSVILHNGKLL-WG 659
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP-ERVQGPFSESPVDQVSCGWK 351
V CG HT LT G +Y WGSN G LG+G + + SP ++ + + QVS G
Sbjct: 417 VSCGRKHTLALTDYG-VYAWGSNTYGQLGLGPL-IQESPYPQIITNLAFKKMVQVSAGQY 474
Query: 352 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
HT A+S G++ TWGW G HG GH + +L P
Sbjct: 475 HTIALSSSGEVYTWGW-GIHGQL---GHGDCDNIYYPKLLP 511
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4094 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4153
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4154 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4211
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4212 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4268
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4269 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4321
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4322 RPRLVAALQGKKVNRVACGSAHT 4344
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4054 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4112
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4113 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4170
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4171 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4221
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4222 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4281
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4282 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4340
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4341 SAHTLAWSTSK 4351
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3988 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4045
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4046 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4103
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4104 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4158
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4159 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4272
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4273 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4305
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3983 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4041
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4042 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4101
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4102 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4152
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4153 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4213 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4267
Query: 384 LDR 386
+ R
Sbjct: 4268 VRR 4270
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4252 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4311
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4312 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4346
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H + GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4312 SAHTLAWSTSK 4322
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4017
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4076 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4129
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4184
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P I L +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 4185 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4244
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V ++ G H SE G++ TWG
Sbjct: 4245 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4276
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 121/303 (39%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G +V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4238
Query: 384 LDR 386
+ R
Sbjct: 4239 VRR 4241
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 152/334 (45%), Gaps = 24/334 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVY---ATGLND 99
G G +LG+G LE PV S A G LT +Y ++G+
Sbjct: 59 GTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYA 118
Query: 100 FGQLGISENIGYSL--EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+ + I Y EP + G +V+I TG H A++ +GE+Y+WG + GQ GL
Sbjct: 119 LLPMRRDKRIYYPTLCEPAQSLG----IVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGL 174
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K A+ +PI ++E + G + S AV+ G+V +WG G G+LGH
Sbjct: 175 GNKEAQHLPI--RMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNG---- 228
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGN 276
+ E P+ + + G + G + ++E GR++ FG+ ++ E
Sbjct: 229 -----TEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERG 283
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
PS++ L +EV GG H LT G+ ++WG E+G LG G+ + PE +
Sbjct: 284 LCLEPSVVP-LDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPT 342
Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
V VS G H+ A++E G++ WG+ S
Sbjct: 343 LGPAVGVVSVSAGGGHSLALTESGQVYGWGFNAS 376
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 20/321 (6%)
Query: 43 WGN-GDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G Y L + + + P +C + + + G H + L++ G VY G ++FG
Sbjct: 111 WGSSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFG 170
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
Q G+ L P+R+ + K +V +S G HS+A++ DG ++ WG +GQLG
Sbjct: 171 QTGLGNKEAQHL-PIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGT 229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P V GI F + T G ++ ++G G +G+LGHG+ L
Sbjct: 230 EDELKPKELTVIRGEGISRVTCGTDFTGLLNETEG-RLFTFGNGEAGQLGHGERGLCL-- 286
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P ++ L+ VK AAG H + ++G+ + +G ++ +
Sbjct: 287 -------EPSVVP-LD--NVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLK 336
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P I L + VV GG H+ LT G++Y WG N +G LG+G+ + +P ++
Sbjct: 337 PEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKA- 395
Query: 338 FSESPVDQVSCGWKHTAAISE 358
++ V + CG H+ I++
Sbjct: 396 LADKRVLRAICGLDHSLFITQ 416
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 20/268 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WGN ++G+ GLG+ E++ P+ F S+ ++CG H+ +++ G V+ G G
Sbjct: 163 IWGNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDG 222
Query: 102 QLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGK 159
QLG L+P ++ ++ E + +++ G + + +G L+ +G GQLG G+
Sbjct: 223 QLG-HNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGE 281
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P ++ + K+ A G +A+T G+ SWG G GRLGHG L
Sbjct: 282 RGLCLEPSVVPLDNV-----KEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFL- 335
Query: 220 FLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P I L V V +AG HS + E+G+VY +G A ++ +
Sbjct: 336 --------KPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSV 387
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLT 304
P+LI L +CG H+ +T
Sbjct: 388 MTPTLIKALADKRVLRAICGLDHSLFIT 415
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y G N QLG+G +P+P + E G AA G+ Q+ +T ++ WG+
Sbjct: 55 VYTCGTGRNAQLGVGDLEDYQLPVPVQ-ELPVGASYIDAAAGWTQNFLLTTRHELYYWGS 113
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G ++L R Y P L + + + + G H + +NG VYI+G
Sbjct: 114 SGV--------YALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWG 165
Query: 264 DRAVDKMLF--QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + +E H + +V CG H+ ++ G ++TWG +G LG
Sbjct: 166 NSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLG 225
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
+ P+ + E + +V+CG T + +EG++ T+G G
Sbjct: 226 HNGTEDELKPKELTVIRGEG-ISRVTCGTDFTGLLNETEGRLFTFGNG 272
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 2899 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGR 2958
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 2959 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRG- 3016
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P KV+ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3017 -GSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3073
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3074 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3126
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3127 RPRLVAALQGKKVNRVACGSAHT 3149
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 149/305 (48%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VQ++ G A+TV+G++Y G+ +
Sbjct: 1796 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEAT 1855
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V P+P +V LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 1856 NGRLGLGVSSGTV-PVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKL 1914
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 1915 GH--------FSRXNCD-KPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 1966 LGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2025
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 2026 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 2081
Query: 386 RGQLT 390
+ Q+
Sbjct: 2082 KPQVV 2086
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 146/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 1852 GEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDD 1911
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG +P I LK + + I+ G HS+A+T GELY WG G+LG G
Sbjct: 1912 GKLGHFSRXNCD-KPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 1970
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1971 NTTQLKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2024
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2025 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2079
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 2080 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2139
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 2140 G-LEGQKITRVACGSSHSVA 2158
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 1906 WGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1966 LGHGDNT-TQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2023
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2024 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2080
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 2081 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2129
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2130 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2161
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 155/333 (46%), Gaps = 25/333 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 2793 WGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQL-IGGEQTLFAVTADGKLYATGYGAGG 2851
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2852 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2909
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2910 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD---- 2963
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ E+ V+ +GD K+
Sbjct: 2964 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGS 3018
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
+ + P + L + +V CG + LT G +YTWG + LG GS D + P +
Sbjct: 3019 DGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3078
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
VQG V ++ G H +E G++ TWG
Sbjct: 3079 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3110
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 139/316 (43%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 2859 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 2917
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G LY WGK G+LG ++ P VE
Sbjct: 2918 PRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 2975
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 2976 LQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3026
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+ L G+ G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3027 VDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3086
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 3087 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 3145
Query: 350 WKHTAAISEGKILTWG 365
HT A S K + G
Sbjct: 3146 SAHTLAWSTSKPASAG 3161
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 1834 GGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRH 1893
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+T DG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1894 ATALTADGKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSSHSAALTS 1951
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 1952 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLA 2002
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2003 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2062
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2063 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 2120
Query: 370 HG 371
HG
Sbjct: 2121 HG 2122
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1788 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVE 1845
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVK-----KVAVHSGG-RHATALTA 1899
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 1900 DGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWG 1959
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 1960 LGEYGRLGHGDNTTQLKPKMVKVLVGHRVV-QVACGSRDAQTLALTDEGLVFSWGDG 2015
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 138/306 (45%), Gaps = 25/306 (8%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G VY G N GQLG E + P L Q+ G A+T DG+LY
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKV-PTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+ LG + + PT +E + +F K+ A+ G + +A++ G+V SWG
Sbjct: 2846 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 2904 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
++ + +P L+ L +V CG T LT +++WG + G LG
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
G D P +V V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3015 RGGSDGCKVPMKVDALTGLGAV-KVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGS 3069
Query: 381 GGQLDR 386
+ R
Sbjct: 3070 DDHVRR 3075
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 99/251 (39%), Gaps = 69/251 (27%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 2788 GTVYGWGHNHRGQLG-GVEGAKV-KVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A
Sbjct: 2846 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVA----------------- 2879
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V GG H L+S GE+Y+WG E+G LG
Sbjct: 2880 -------------------------------VNSGGKHCLALSSEGEVYSWGEAEDGKLG 2908
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
G+ P ++ VD V+ G H+A ++ G + TWG G + GHS
Sbjct: 2909 HGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACVTAAGGLYTWG----KGRYGRLGHSD 2963
Query: 381 GGQLDRGQLTP 391
QL P
Sbjct: 2964 S----EDQLKP 2970
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3057 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3116
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 3117 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 3151
>gi|395842918|ref|XP_003794254.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Otolemur garnettii]
Length = 468
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 157/328 (47%), Gaps = 44/328 (13%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
LE P+ ++ + ++CG AH+L LT++ V++ G N +GQ G + E+ YS
Sbjct: 163 LEPSPIPLPLDRPQETRVLQVSCGRAHSLVLTDSEGVFSMGNNSYGQCGRKVVEDEIYSE 222
Query: 114 --EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ R+ +VVQ++ G HS +T GE+Y G ++GQ GLG + +PTK+
Sbjct: 223 SHKIHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGH--YNITSVPTKL 280
Query: 172 E-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ L+G+ Q A + +AV+ G + WG + + + ST PR
Sbjct: 281 QGDLAGVNIVQVATYGDCCLAVSADGGLFGWG--------NSEYRQLASVTESTQVNVPR 332
Query: 231 LIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG-----------DRAVDKMLFQEGNHA 278
+ GV KV+ AA G A ++ G V+++G + A+ +M+
Sbjct: 333 CLP-FSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMI------- 384
Query: 279 RRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P+L ++ EV CG H LT+ GEL+ WG N GCLGIG ++ + P R
Sbjct: 385 -PPTLFGLTEFNPEVRVSHIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWR 443
Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKI 361
V P PVD V+CG H +++ I
Sbjct: 444 VTMP--GEPVD-VACGVDHMVTLAKSFI 468
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 160/370 (43%), Gaps = 69/370 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG--LNDF 100
WG G+LG G+ +P V A + ++ +ACG HT +T +G +Y G ++
Sbjct: 322 WGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNT 381
Query: 101 GQLG--------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G LG I + +E +RIS +S G H++A++ G+L+ +G +
Sbjct: 382 GYLGHGSAVSHWIPREVIGQIESVRISF-------VSCGPWHTAAVSSQGKLFTFGDGTF 434
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------------GGKVLS 200
G LG G +++ P +VE L G+ T + + G + AV GK+ +
Sbjct: 435 GALGHGDRSS--TSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFT 492
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN--GR 258
WGAG G+LGHG E PRL+ + + HS I G+
Sbjct: 493 WGAGERGQLGHGDEE-------------PRLVPSCVSMPAGVCQVACAHSMTIALTVLGQ 539
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGE 308
VY G A D Q G+ P + KLP + +++ CG +H L+S G+
Sbjct: 540 VYTMG--AAD--YGQLGS----PCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGD 591
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG--- 365
+YTWG NG LG G I H+P V+ V V CG TA I K ++
Sbjct: 592 VYTWGKGINGQLGHGDIKDRHTPTLVKA-LKHKQVKSVVCGSNFTAVICPHKCVSSADQS 650
Query: 366 -WGGSHGTFS 374
G H F+
Sbjct: 651 ICSGCHNPFN 660
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 40/314 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHH 134
+ACG H + +T+ G +++ G + G+LG + S +P I L + VV ++ G H
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVS-QPKVIDALSESNVVLVACGEFH 361
Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSV 190
+ A+TV G LY WG +++ G LG G + IP + ++E + F + G +
Sbjct: 362 TCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFV---SCGPWHTA 418
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
AV+ GK+ ++G G G LGHG S STS+ PR ++ L+G++ + G H+
Sbjct: 419 AVSSQGKLFTFGDGTFGALGHGDRS-------STSK--PREVESLKGLRTLKVSCGIWHT 469
Query: 251 AC----IDENGRVYIFGDRAVDKMLFQ----------EGNHARR--PSLISKLPYSEEVV 294
A I+E+ R+ D ++ LF G+ R PS +S +V
Sbjct: 470 AAVIDFINESDRL----DTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAGVCQVA 525
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
C T LT G++YT G+ + G LG V P G + Q++CG H
Sbjct: 526 CAHSMTIALTVLGQVYTMGAADYGQLG-SPCSVGKLPIHTDGDIRNCHIKQIACGSHHVV 584
Query: 355 AI-SEGKILTWGWG 367
A+ S G + TWG G
Sbjct: 585 ALSSNGDVYTWGKG 598
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ ++ + + A G + +V VT G++ SWG G+LGHG ++ +
Sbjct: 288 LPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADV--------- 338
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
P++I L V + A G H+ + +G +Y +GD + G +H +
Sbjct: 339 SQPKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREV 398
Query: 284 ISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
I ++ V CG +HT ++S G+L+T+G G LG G P V+
Sbjct: 399 IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVES-LKGL 457
Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWG 367
+VSCG HTAA+ + GK+ TWG G
Sbjct: 458 RTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAG 496
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 192 VTGGGKVLSWGAGGS-----GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
V G G VL G G S G + + S I+ P+ + + + +I A G
Sbjct: 251 VDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRM----DALLPKALDRIAALDAQIIACG 306
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLT 304
H+ + + G+++ +G+ + K+ +P +I L S V+ CG +HTC +T
Sbjct: 307 SKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVT 366
Query: 305 SGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
G LYTWG + G LG GS P V G + VSCG HTAA+ S+GK+
Sbjct: 367 VSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKL 426
Query: 362 LTWGWGGSHGTFSEDGH 378
T+G GTF GH
Sbjct: 427 FTFG----DGTFGALGH 439
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3759 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3818
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3819 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3876
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3877 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3933
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3934 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3986
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3987 RPRLVAALQGKKVNRVACGSAHT 4009
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2657 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2716
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2717 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2775
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 2776 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 2827 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2886
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 2887 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 2942
Query: 386 RGQLT 390
+ Q+
Sbjct: 2943 KPQVV 2947
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2713 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2773 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2831
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2832 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2885
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2886 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2940
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 2941 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3000
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3001 G-LEGQKITRVACGSSHSVA 3019
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3719 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3777
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3778 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3835
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3836 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3886
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3887 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3946
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 3947 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4005
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4006 SAHTLAWSTSK 4016
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2767 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2827 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2884
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2885 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2941
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2942 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2990
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2991 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3022
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3653 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3710
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3711 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3768
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3769 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3823
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3824 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3937
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 3938 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3970
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2695 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2754
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2755 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2812
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2813 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2863
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2864 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2923
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2924 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 2981
Query: 370 HG 371
HG
Sbjct: 2982 HG 2983
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2649 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2706
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 2760
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2761 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2820
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 2821 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 2876
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3648 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3706
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3707 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3766
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3767 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3817
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3818 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3878 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 3932
Query: 384 LDR 386
+ R
Sbjct: 3933 VRR 3935
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 445
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 446 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 501
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 502 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 549
Query: 230 RLIKELEGVKVKIAAAG 246
L+ L+G+KV A G
Sbjct: 550 MLVAGLKGLKVIDVACG 566
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 126/307 (41%), Gaps = 50/307 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 517
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G +G
Sbjct: 518 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACG-------SG 568
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+ L+ + RL S+LG L + +L GV + G+
Sbjct: 569 DAQTLAVTENETTRLSVLWR-SVLGILCVSGVVESFRYNQL-GVGCRCRQRGWEPP---- 622
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEE-----VVCGG--------- 297
+ + +G D ML +EG A RP + S++ +VCGG
Sbjct: 623 QEDLKFFYGVLTRDVML-REGQIVFEAGRPGCVPTPVSSQKQALGYIVCGGCSSLGPGKK 681
Query: 298 --------YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSC 348
H LT E+++WGSN+ C ++ V PE P + ++C
Sbjct: 682 VIDVAAGSTHCLALTEDSEVHSWGSNDQ-CQHFDTLRVT-KPEPAALPGLDAKHIMGITC 739
Query: 349 GWKHTAA 355
G + A
Sbjct: 740 GPAQSCA 746
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3917 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3976
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 3977 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 518
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 519 AAITAEGELYTWGRGNYGRLGHGS-SED 545
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 474 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 532
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
++G+LG + ++ P+ ++GLK +V+ ++ G + + V
Sbjct: 533 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 575
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 87/252 (34%), Gaps = 75/252 (29%)
Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
P++ GL V QI+ ++ +G +Y NS+ QL G + ++ I
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKI--- 453
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
A +A+ G+V SWG G GRLGHG + P+
Sbjct: 454 ----------AAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPK 494
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
+I G Q G H
Sbjct: 495 VISAFSGK----------------------------------QAGKHVVH---------- 510
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+ CG ++ +T+ GELYTWG G LG GS + P V G +D V+CG
Sbjct: 511 --IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID-VACGS 567
Query: 351 --KHTAAISEGK 360
T A++E +
Sbjct: 568 GDAQTLAVTENE 579
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3246
Query: 386 RGQLT 390
+ Q+
Sbjct: 3247 KPQVV 3251
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4310 SAHTLAWSTSK 4320
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3285
Query: 370 HG 371
HG
Sbjct: 3286 HG 3287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4236
Query: 384 LDR 386
+ R
Sbjct: 4237 VRR 4239
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 564 AAITAEGELYTWGRGNYGRLGHGS-SED 590
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P+ K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 SDGSKVPM--KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGSKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4312 SAHTLAWSTSK 4322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 777
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCG--GYHTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG+G+ + + P+ ++G + +D
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ ++ P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGTRDAQTLALTDEGLVFSWGDG 3181
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLG G E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LGLG
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4184 SDGSKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4238
Query: 384 LDR 386
+ R
Sbjct: 4239 VRR 4241
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGLGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3250
Query: 386 RGQLT 390
+ Q+
Sbjct: 3251 KPQVV 3255
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 141/314 (44%), Gaps = 25/314 (7%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVY---IFGDRAVDKMLFQEGNHARRPSLISKLP 288
I L G+ V G S + ++G VY +F R ++ +H RRP + L
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVF--RDYHRLGHGSDDHVRRPRQVQGLQ 4253
Query: 289 YSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
+ + G H T GE+YTWG N+ G LG G+ + + P R+ +++V
Sbjct: 4254 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRV 4312
Query: 347 SCGWKHTAAISEGK 360
+CG HT A S K
Sbjct: 4313 ACGSAHTLAWSTSK 4326
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++YTWG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 157/335 (46%), Gaps = 28/335 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS-NENGCLGIGSIDVLHSP 331
+ + P I L +V CG + LT G +YTW + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRP 4246
Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4247 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4280
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3289
Query: 370 HG 371
HG
Sbjct: 3290 HG 3291
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 18/264 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA-GGSGRLGHGQESSIL 218
+ +P K++ L+G+ + G + SVA+T G V +W RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHV- 4243
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
PR ++ L+G KV A G LH C E+G VY +GD ++ N
Sbjct: 4244 --------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI 4295
Query: 279 RRPSLISKL--PYSEEVVCGGYHT 300
+RP L++ L V CG HT
Sbjct: 4296 QRPRLVAALQGKKINRVACGSAHT 4319
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 132/284 (46%), Gaps = 21/284 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G +Y G N GQLG E + P L VQ+ G A+T DG+LY
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+ LG + + PT +E + +F K+ A+ G + +A++ G+V SWG
Sbjct: 4015 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4073 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
++ + +P L+ L ++ CG T LT +++WG + G LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
G D P ++ + V +V CG + + A+++ G + TW
Sbjct: 4184 RGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTW 4226
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 92/227 (40%), Gaps = 61/227 (26%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G GRLG G S+ TP L++ ++ V +K A
Sbjct: 4015 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVA----------------- 4048
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V GG H L+S GE+Y+WG E+G LG
Sbjct: 4049 -------------------------------VNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
G+ P ++ VD V+ G H+A I+ G + TWG G
Sbjct: 4078 HGNRSPCDRPRVIESLRGIEVVD-VAAGGAHSACITAAGDLFTWGKG 4123
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 238 VKVKIAAAGFLHSACIDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
V+V A FL + NGRVY + + L Q SL S+
Sbjct: 455 VQVACAEKRFL---ILSRNGRVYTQAYNSDTLGPQLVQ--------SLASRNIVKIAAHS 503
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKH 352
G+H L++ GE+++WG + G LG G L P+ + G + V ++CG +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563
Query: 353 TAAIS-EGKILTWGWGG----SHGTFSED 376
+AAI+ EG++ TWG G HG+ SED
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4279 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4320
>gi|408501717|ref|YP_006865636.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408466541|gb|AFU72070.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1828
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 156/364 (42%), Gaps = 58/364 (15%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
A WG+ G+LG GS +S PV A + ++ G +L L G YA
Sbjct: 1347 AYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDFAYTQVSAGYGFSLALGSDGNAYAW 1406
Query: 96 GLNDFGQLGISENIGYSLEPLRI-----SGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N GQLG G + P+++ +G Q+S G +HS A+ D + Y WG
Sbjct: 1407 GDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQVSAGGYHSLAVGKDHQAYAWGDR 1466
Query: 151 SNG-QLGLGKKAAKVIPIPTKVECLS---GIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
SNG Q+G G P P V + G +Q + G++ S+ + G+ +WG G S
Sbjct: 1467 SNGGQVGDGNTTGNA-PAPVAVNASATSPGFQVRQVSAGYQHSLIIGISGQTYAWGYGDS 1525
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---------HSACIDENG 257
GRLG+ +SS + TP + VK + + GF HS I +G
Sbjct: 1526 GRLGNNAKSS---------QATPVSVSSP--VKYEDGSIGFFATQVSAGGSHSLAIGRDG 1574
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP------YSEEVVCGGYHTCVLTSGGELYT 311
+ Y +G ++ + N A P+L++ E+ GG+ + G++YT
Sbjct: 1575 KAYAWGANTDGRLGTGDTNDAAIPTLVANPDGGSDGFKPTEISAGGWFCAGIDDKGKIYT 1634
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPV--------DQVSCGWKHTAAISEGKILT 363
WGSN + LG SI G SESPV Q+S G + I + +
Sbjct: 1635 WGSNGHNALGNVSI---------SGSISESPVLVSKDGSTTQISAGERQVLVI-DSNDMA 1684
Query: 364 WGWG 367
+GWG
Sbjct: 1685 YGWG 1688
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 34/303 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS---AFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G LG + ++ PV + A + + +++ G ++ L G VY G N
Sbjct: 242 WGDNSKGELGDSTTINKNTPVRITENEAIKGKTFISVSAGTTFSMALASDGTVYTWGDNS 301
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG S+ P++ + L + IS GY H+ A++ G +Y WG N GQLG G
Sbjct: 302 RGELGNGSTTNSSV-PVK-ANLNATITAISAGYWHAMALSSSGTIYTWGDNEYGQLGNGH 359
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V P V FT +A G++ A+ G +WG G+L G ++ G
Sbjct: 360 TGVNVNASPAAVSSSGVTFTTISA-GYDFQTALDSQGHAYAWGRNQGGQLSIG---TMDG 415
Query: 220 FLRSTSEYTP-RLIKELEG-----VKVKIAAAGFLHSACIDENGRVYIFG-------DRA 266
++ YTP R+ + G V I AG+LH + +G+VY +G D
Sbjct: 416 TSSGSNVYTPSRIYGDSTGNPDSTVYTDI-DAGYLHVLALSNSGKVYYWGYPLTKGDDPN 474
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
D + H+ PSL+S LP G Y + V+ S G LY +GSN +G LG
Sbjct: 475 ADSV------HSFYPSLVS-LPTGAATPVSASAGDYSSAVVDSAGSLYMFGSNSSGQLGD 527
Query: 323 GSI 325
G+
Sbjct: 528 GTT 530
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 154/344 (44%), Gaps = 38/344 (11%)
Query: 43 WGNGDYGRLG----LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WGN G LG G+ + R A + A++ G A+++ L G VY G N
Sbjct: 802 WGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIAVSAGDAYSMALASDGTVYTWGNN 861
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG YS EP++ ++ IS G ++ A+ DG +Y WG N+ GQLG+G
Sbjct: 862 GKGQLGNGTTGSYSSEPVKAQTDNAKITAISAGRAYAMALASDGTVYTWGDNTQGQLGIG 921
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ PTKV LS I A GF A+ G +WG G+LG+G +
Sbjct: 922 NYDSHS--TPTKVTALSNITAISA--GFTSGTALDSQGHAWTWGQNDKGQLGNGAPN--- 974
Query: 219 GFLRSTSEYTPRLIKELE----GVKVKIA-AAGFLHSACIDENGRVYIFGD-RAVDKMLF 272
RS TP +++L+ + IA +AG+ H +D + +Y +G A+
Sbjct: 975 ---RSP---TPTRVQDLDTGQPDTRFYIAISAGYQHVLALDTDHDLYGWGSGTAIGSTT- 1027
Query: 273 QEGNHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
+ N ++R S + + + +E V G + + G++YTWG G LG G D
Sbjct: 1028 -DTNVSKRGS--TAISFGDEPVNITAISAGDDGSEAIDDSGKIYTWGKEAYGQLGNGVYD 1084
Query: 327 VLH---SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
+P+ + S VS H AI S+G + TWG+
Sbjct: 1085 NTAWQINPKTITLAQSVKAC-TVSTSSHHQTAIGSDGLLYTWGY 1127
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 32/305 (10%)
Query: 40 AALWGNGDYGRLGLGSLE-SRWRPVVCS----AFEKHSLKALACGGAHTLFLTETGCVYA 94
A WG+ G+LG G+ + PV A + ++ GG H+L + + YA
Sbjct: 1403 AYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQVSAGGYHSLAVGKDHQAYA 1462
Query: 95 TG-LNDFGQLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGK 149
G ++ GQ+G G + P+ ++ +V Q+S GY HS I + G+ Y WG
Sbjct: 1463 WGDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVSAGYQHSLIIGISGQTYAWGY 1522
Query: 150 NSNGQLGLGKKAAKVIPI----PTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+G+LG K+++ P+ P K E S G F Q + G S+A+ GK +WGA
Sbjct: 1523 GDSGRLGNNAKSSQATPVSVSSPVKYEDGSIGFFATQVSAGGSHSLAIGRDGKAYAWGAN 1582
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-----VKVKIAAAGFLHSACIDENGRV 259
GRLG G + P L+ +G +I+A G+ A ID+ G++
Sbjct: 1583 TDGRLGTGDTNDAA---------IPTLVANPDGGSDGFKPTEISAGGWF-CAGIDDKGKI 1632
Query: 260 YIFGDRAVDKM--LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G + + + G+ + P L+SK + ++ G V+ S Y WG N +
Sbjct: 1633 YTWGSNGHNALGNVSISGSISESPVLVSKDGSTTQISAGERQVLVIDSNDMAYGWGDNSS 1692
Query: 318 GCLGI 322
LG
Sbjct: 1693 RQLGT 1697
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TK 170
+L P + G++ Q+S G+ H+ A+ DG +Y WG NS G+LG K P+ T+
Sbjct: 209 TLTPPKPRGVR--FAQVSAGHDHTLAVGSDGHVYAWGDNSKGELGDSTTINKNTPVRITE 266
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
E + G + G S+A+ G V +WG G LG+G +T+ P
Sbjct: 267 NEAIKGKTFISVSAGTTFSMALASDGTVYTWGDNSRGELGNGS---------TTNSSVP- 316
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLP 288
+K + +AG+ H+ + +G +Y +GD ++ N P+ +S
Sbjct: 317 -VKANLNATITAISAGYWHAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSG 375
Query: 289 YSEEVVCGGYH-TCVLTSGGELYTWGSNENGCLGIGSID------VLHSPERVQGPFSES 341
+ + GY L S G Y WG N+ G L IG++D +++P R+ G + +
Sbjct: 376 VTFTTISAGYDFQTALDSQGHAYAWGRNQGGQLSIGTMDGTSSGSNVYTPSRIYGDSTGN 435
Query: 342 P----VDQVSCGWKHTAAISE-GKILTWGW 366
P + G+ H A+S GK+ WG+
Sbjct: 436 PDSTVYTDIDAGYLHVLALSNSGKVYYWGY 465
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 121/275 (44%), Gaps = 32/275 (11%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
++ P G++ Q+STG +HS A+ DG Y WG NS GQLG G K + P+ K
Sbjct: 1317 TITPPSQRGIR--FAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPVQVKK 1374
Query: 172 ECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+G Q + G+ S+A+ G +WG G G+LG G + TP
Sbjct: 1375 PSDAGTDFAYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGG--------TNTTP 1426
Query: 230 RLIKELEGVKVKIA----AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPS 282
+K+ G A +AG HS + ++ + Y +GDR+ + +GN +A P
Sbjct: 1427 VQVKKPSGAGTDFAYTQVSAGGYHSLAVGKDHQAYAWGDRSNGGQV-GDGNTTGNAPAPV 1485
Query: 283 LISKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
++ S +V G H+ ++ G+ Y WG ++G LG + +P V P
Sbjct: 1486 AVNASATSPGFQVRQVSAGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSSP 1545
Query: 338 FSESP------VDQVSCGWKHTAAI-SEGKILTWG 365
QVS G H+ AI +GK WG
Sbjct: 1546 VKYEDGSIGFFATQVSAGGSHSLAIGRDGKAYAWG 1580
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA-AKVIPIP-T 169
+L P + ++ Q S G +H+ A+ DG +Y WG ++G LG K + P+ T
Sbjct: 769 TLTPPKPRAVR--FAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRIT 826
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+ + + G + G S+A+ G V +WG G G+LG+G +T Y+
Sbjct: 827 ENDAIKGKIFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNG----------TTGSYSS 876
Query: 230 RLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
+K + + K+ +AG ++ + +G VY +GD ++ + P+ ++ L
Sbjct: 877 EPVKAQTDNAKITAISAGRAYAMALASDGTVYTWGDNTQGQLGIGNYDSHSTPTKVTALS 936
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ--- 345
+ G L S G +TWG N+ G LG G+ + +P RVQ + P +
Sbjct: 937 NITAISAGFTSGTALDSQGHAWTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYI 996
Query: 346 -VSCGWKHTAAISEGKILTWGWG 367
+S G++H A+ L +GWG
Sbjct: 997 AISAGYQHVLALDTDHDL-YGWG 1018
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 138/320 (43%), Gaps = 38/320 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-----SGLKKEVVQIST 130
++ G H+L + G YA G N GQLG + + S P+++ +G Q+S
Sbjct: 1331 VSTGKNHSLAVGSDGNAYAWGDNSTGQLG-NGSKDSSKTPVQVKKPSDAGTDFAYTQVSA 1389
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGF 186
GY S A+ DG Y WG N GQLG G A P +V+ SG T Q + G
Sbjct: 1390 GYGFSLALGSDGNAYAWGDNGRGQLGKGA-AGGTNTTPVQVKKPSGAGTDFAYTQVSAGG 1448
Query: 187 EQSVAVTGGGKVLSWGA-GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S+AV + +WG G++G G + + + G +V+ +A
Sbjct: 1449 YHSLAVGKDHQAYAWGDRSNGGQVGDGNTTG-----NAPAPVAVNASATSPGFQVRQVSA 1503
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLISKLPYSE--------E 292
G+ HS I +G+ Y +G ++ GN+A+ S+ S + Y + +
Sbjct: 1504 GYQHSLIIGISGQTYAWGYGDSGRL----GNNAKSSQATPVSVSSPVKYEDGSIGFFATQ 1559
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES----PVDQVSC 348
V GG H+ + G+ Y WG+N +G LG G + P V P S P + +
Sbjct: 1560 VSAGGSHSLAIGRDGKAYAWGANTDGRLGTGDTNDAAIPTLVANPDGGSDGFKPTEISAG 1619
Query: 349 GWKHTAAISEGKILTWGWGG 368
GW +GKI TWG G
Sbjct: 1620 GWFCAGIDDKGKIYTWGSNG 1639
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 132/305 (43%), Gaps = 33/305 (10%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEV-VQISTGY 132
+ G HTL + G VYA G G LG S+N G + P+RI+ +K ++ + +S G
Sbjct: 784 SAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIAVSAGD 843
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+S A+ DG +Y WG N GQLG G + P K + + T +A G ++A+
Sbjct: 844 AYSMALASDGTVYTWGNNGKGQLGNGTTGSYSSE-PVKAQTDNAKITAISA-GRAYAMAL 901
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V +WG G+LG G S TP + L + +AGF
Sbjct: 902 ASDGTVYTWGDNTQGQLGIGNYD---------SHSTPTKVTALS--NITAISAGFTSGTA 950
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE------VVCGGY-HTCVLTS 305
+D G + +G ++ N + P+ + L + + GY H L +
Sbjct: 951 LDSQGHAWTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYIAISAGYQHVLALDT 1010
Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPER--VQGPFSESPVD--QVSCGWKHTAAISE-GK 360
+LY WGS IGS + +R F + PV+ +S G + AI + GK
Sbjct: 1011 DHDLYGWGSG----TAIGSTTDTNVSKRGSTAISFGDEPVNITAISAGDDGSEAIDDSGK 1066
Query: 361 ILTWG 365
I TWG
Sbjct: 1067 IYTWG 1071
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
GI Q + G S+AV G +WG +G+LG+G + S TP +K+
Sbjct: 1325 GIRFAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKD---------SSKTPVQVKKP 1375
Query: 236 EGVKVKIA----AAGFLHSACIDENGRVYIFGDRAVDKM-------LFQEGNHARRPSLI 284
A +AG+ S + +G Y +GD ++ ++PS
Sbjct: 1376 SDAGTDFAYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGA 1435
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN-GCLGIGSIDVLHSPERVQ-GPFSESP 342
+V GGYH+ + + Y WG N G +G G+ ++P V + SP
Sbjct: 1436 GTDFAYTQVSAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGNT-TGNAPAPVAVNASATSP 1494
Query: 343 ---VDQVSCGWKHTAAIS-EGKILTWGWGGS 369
V QVS G++H+ I G+ WG+G S
Sbjct: 1495 GFQVRQVSAGYQHSLIIGISGQTYAWGYGDS 1525
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA---FEKHSL----KALACGGAHTLFLTETGCVYAT 95
WG GD GRLG + S+ PV S+ +E S+ ++ GG+H+L + G YA
Sbjct: 1520 WGYGDSGRLGNNAKSSQATPVSVSSPVKYEDGSIGFFATQVSAGGSHSLAIGRDGKAYAW 1579
Query: 96 GLNDFGQLGISENIGYSLEPLRIS------GLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G N G+LG + ++ L + G K +IS G + I G++Y WG
Sbjct: 1580 GANTDGRLGTGDTNDAAIPTLVANPDGGSDGFKP--TEISAGGWFCAGIDDKGKIYTWGS 1637
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N + LG + + P V T Q + G Q + + WG S +L
Sbjct: 1638 NGHNALGNVSISGSISESPVLVSKDGS--TTQISAGERQVLVIDSNDMAYGWGDNSSRQL 1695
Query: 210 GHGQESS 216
G +S+
Sbjct: 1696 GTNLDST 1702
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 20/165 (12%)
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYS 290
G++ + G HS + +G Y +GD + ++ + ++ P + K ++
Sbjct: 1324 RGIRFAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDFA 1383
Query: 291 EEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPF---SESPVDQ 345
V GY + L S G Y WG N G LG G+ ++ P +V+ P ++ Q
Sbjct: 1384 YTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQ 1443
Query: 346 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
VS G H+ A+ G H ++ S+GGQ+ G T
Sbjct: 1444 VSAGGYHSLAV----------GKDHQAYAWGDRSNGGQVGDGNTT 1478
>gi|116328469|ref|YP_798189.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116121213|gb|ABJ79256.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 506
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 133/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL +V+Q+ G HS+A+T GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLS-DVIQVIAGSEHSAALTKSGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L AG S I +NG V +G
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANG 428
Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 31/312 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AIT +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ++G VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTKSGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 357
L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQVLNITNASSIWAGGTQSFSILK 417
Query: 358 EGKILTWGWGGS 369
G++ WG G+
Sbjct: 418 NGEVKGWGANGN 429
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 29/268 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+T G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
L +V+ G H+ LT GE+Y WG N+ G LG G + + +P +V+G S
Sbjct: 292 LSDVIQVIAGSEHSAALTKSGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG---LSG 348
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ Q++ G H A+ S+G+I +WG S
Sbjct: 349 IKQIANGRDHILALASDGRIYSWGLNAS 376
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 147/341 (43%), Gaps = 28/341 (8%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G ++G+LG G S V+ ++ ++ +++ +T+ G VY G N GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAITKNGRVYTWGNNAKGQ 209
Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LGI N G P + G+ V+ + G++H+ + DG + +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268
Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
QLG G A P V LS + Q G E S A+T G+V WG G LG
Sbjct: 269 QLGNGANDLNADSFSMNPVAVVGLSDVI--QVIAGSEHSAALTKSGEVYVWGRNQYGNLG 326
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+G+ S+ + + TP ++ L G+K A G H + +GR+Y +G A ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASDGRIYSWGLNASGQL 379
Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN-GCLGIGSID 326
N P+ + + + + GG + + GE+ WG+N N L IG +
Sbjct: 380 GIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
L E + V CG H A + G+I WGW
Sbjct: 440 TLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGW 480
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L I G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGNGEIYGWGWNFKGSLGR 488
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3250
Query: 386 RGQLT 390
+ Q+
Sbjct: 3251 KPQVV 3255
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4314
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4315 SAHTLAWSTSK 4325
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSFEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHT 4318
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++YTWG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3289
Query: 370 HG 371
HG
Sbjct: 3290 HG 3291
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4187 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4241
Query: 384 LDR 386
+ R
Sbjct: 4242 VRR 4244
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4320
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A G + AC + NGRVY + + L Q SL S+
Sbjct: 449 LANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQ--------SLASRNIVKIA 500
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L++ GE+++WG + G LG G L P+ + G + V ++CG
Sbjct: 501 AHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|116331201|ref|YP_800919.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116124890|gb|ABJ76161.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 506
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL +V+Q+ G HS+A+T GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLS-DVIQVIAGSEHSAALTESGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A + P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 136/312 (43%), Gaps = 31/312 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AIT +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + E+G VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTESGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 357
L S G +Y+WG N +G LGIG SP P + S W + + +
Sbjct: 361 ALASDGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQVLNITNASSIWAGGTQSFSILK 417
Query: 358 EGKILTWGWGGS 369
G++ WG G+
Sbjct: 418 NGEVKGWGANGN 429
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 29/268 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+T G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
L +V+ G H+ LT GE+Y WG N+ G LG G + + +P +V+G S
Sbjct: 292 LSDVIQVIAGSEHSAALTESGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG---LSG 348
Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
+ Q++ G H A+ S+G+I +WG S
Sbjct: 349 IKQIANGRDHILALASDGRIYSWGLNAS 376
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 147/341 (43%), Gaps = 28/341 (8%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G ++G+LG G S V+ ++ ++ +++ +T+ G VY G N GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAITKNGRVYTWGNNAKGQ 209
Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LGI N G P + G+ V+ + G++H+ + DG + +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268
Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
QLG G A P V LS + Q G E S A+T G+V WG G LG
Sbjct: 269 QLGNGANDLNADSFSMNPVAVVGLSDVI--QVIAGSEHSAALTESGEVYVWGRNQYGNLG 326
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+G+ S+ + + TP ++ L G+K A G H + +GR+Y +G A ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASDGRIYSWGLNASGQL 379
Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN-GCLGIGSID 326
N P+ + + + + GG + + GE+ WG+N N L IG +
Sbjct: 380 GIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439
Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
L E + V CG H A + G+I WGW
Sbjct: 440 TLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGW 480
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L I G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGNGEIYGWGWNFKGSLGR 488
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 20/324 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC---GGAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V + + + + LA G HTL + ++G V++ G D+
Sbjct: 344 GEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDY 403
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N +P +I L+ E VVQ S G+ HS+ +T DG+++ +G+ G LG G
Sbjct: 404 GKLG-HGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGG 462
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ + P + L Q A G + ++A+ GK L +WG G G+LG G S
Sbjct: 463 NSPQ--KTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTS--- 517
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+RS P L+ V +K A G S + NG +Y FG + + +
Sbjct: 518 --VRSI----PNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDN 571
Query: 279 RRPSLISKL-PYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P ++S L P+ ++ G + L + G ++ WG+NE G LGIG+ + + P+ V
Sbjct: 572 TIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQLV-C 630
Query: 337 PFSESPVDQVSCGWKHTAAISEGK 360
FS + + ++S G H AA S +
Sbjct: 631 TFSGTNITRLSAGTTHCAAWSNSQ 654
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 161/336 (47%), Gaps = 29/336 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +G L ++ +P + S F++ ++ + CG T L G V+A G +G
Sbjct: 292 VWGSNIHGELPGLQGKTCLQPNLVSTFKQ--VREIVCGQNCTFLLQTNGSVFACGEGTYG 349
Query: 102 QLGI-SENIGYSLEPLRISGLKKE-VVQIST---GYHHSSAITVDGELYMWGKNSNGQLG 156
+LG + + +SL P I+ L+ ++Q++T G H+ A+ GE++ WG G+LG
Sbjct: 350 RLGQGTSDDEHSLVP--ITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLG 407
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + P ++ L QA+ GF+ S +T GKV ++G G G LG G S
Sbjct: 408 HGNSERQ--RKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNS- 464
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEG 275
+ TP+LI L+ + A G H+ + NG ++Y +GD K+
Sbjct: 465 --------PQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGST 516
Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL-HSPE 332
+ P+L+ +++ CG + VL + G LYT+G + LGI D+L ++
Sbjct: 517 SVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKD--FLGIAETDLLDNTIP 574
Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
++ P+ ++ G + A+ + G I WGWG
Sbjct: 575 QIVSSLMPHPIIDIAVGCNYILALDNSGNI--WGWG 608
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 27/255 (10%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL-GL-GKKAAKVIPIPTKVECLSGIFTK 180
E++ T + I+ +Y+WG N +G+L GL GK + P V + +
Sbjct: 269 NEIIDWFTNFPKDWEISAPITVYVWGSNIHGELPGLQGKTCLQ----PNLVSTFKQV--R 322
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG--- 237
+ G + + G V + G G GRLG G S E++ I EL+G
Sbjct: 323 EIVCGQNCTFLLQTNGSVFACGEGTYGRLGQG---------TSDDEHSLVPITELQGYCI 373
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--- 294
+++ + G H+ + ++G V+ +GD K+ R+P I L +E VV
Sbjct: 374 IQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQ-AEHVVQAS 432
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CG H+ VLT G+++T+G + G LG G +P+ + +E + Q++CG HT
Sbjct: 433 CGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEH-ISQIACGKDHTL 491
Query: 355 AISEG--KILTWGWG 367
A++ K+ WG G
Sbjct: 492 ALANNGKKLYAWGDG 506
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G++G+LGLGS R P + ++ LK +ACG ++ L G +Y G DF
Sbjct: 503 WGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDF-- 560
Query: 103 LGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LGI+E + ++ + S + ++ I+ G ++ A+ G ++ WG N GQLG+G
Sbjct: 561 LGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTT 620
Query: 161 AAKVIP 166
+P
Sbjct: 621 NPHYLP 626
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 143/309 (46%), Gaps = 30/309 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKE-VVQISTGY 132
A GG H+L + G V+A G N GQLGI N SL P+R+ SG V++++ G
Sbjct: 61 AGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKA-SLSPVRVMHKSGAPLNGVLKVAAGE 119
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT---KVECLSGIFTKQAALGFEQS 189
HS A+T GE++ WG NS GQLG G + P+ + L I AA G + S
Sbjct: 120 RHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVG--AACGGKHS 177
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+AV G V +WG+ G++G G + R R K L GVK AAGF H
Sbjct: 178 LAVASDGTVWAWGSNSDGQIGDGTLKN-----RQNPRQVMRFGKPLAGVKA--VAAGFAH 230
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLISKLPYSEEVVCGGYHTCVLT 304
S + +G V+ +GD ++ + P S+ L + G + LT
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290
Query: 305 SGGELYTWGSNENGCLGIGS-----IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
GE++ WG+N G LG+G D L P R V ++ +H+ A+ ++
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRDPL--PVRAANGVPLKGVRAITANGRHSLALMND 348
Query: 359 GKILTWGWG 367
G +L WG G
Sbjct: 349 GSVLAWGAG 357
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 34/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---ACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG G R PV + L+ + ACGG H+L + G V+A G N
Sbjct: 134 WGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNS 193
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ+G +N + +R V ++ G+ HS A++VDG ++ WG N GQLG
Sbjct: 194 DGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWGDNEFGQLGD 253
Query: 158 GKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ P+ L + A F S+A+T G+V +WG G G+LG G
Sbjct: 254 CSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAF--SLALTRDGEVWAWGNNGVGQLGMGPH 311
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVK----IAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ GF+R P ++ GV +K I A G HS + +G V +G A D+
Sbjct: 312 N---GFVRD-----PLPVRAANGVPLKGVRAITANG-RHSLALMNDGSVLAWG--AGDRG 360
Query: 271 LFQEG--NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
+G NH P+L S V+C G YH+ + G + WG N+ G LGIG
Sbjct: 361 QLGQGAQNHEDHPTLASL----HSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGKA 416
Query: 326 D 326
D
Sbjct: 417 D 417
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 35/342 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG+G+ ++ PV S + + +A G H+L LT G V+ G N
Sbjct: 79 WGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNS 138
Query: 100 FGQLGISENIGYSLE---PLRISGLK----KEVVQISTGYHHSSAITVDGELYMWGKNSN 152
GQLG G+ E P+++ ++ + +V + G HS A+ DG ++ WG NS+
Sbjct: 139 KGQLG----DGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSD 194
Query: 153 GQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQ+G G + P + + L+G+ K A GF S+A++ G V +WG G+LG
Sbjct: 195 GQIGDGTLKNRQNPRQVMRFGKPLAGV--KAVAAGFAHSLALSVDGTVWAWGDNEFGQLG 252
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ ++ + + + L+ V V I AAG S + +G V+ +G+ V ++
Sbjct: 253 DCSDYD----RKAPVQVMHSVDRPLDNV-VAI-AAGRAFSLALTRDGEVWAWGNNGVGQL 306
Query: 271 LFQEGNHARRPSLISK------LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
N R L + L + G H+ L + G + WG+ + G LG G+
Sbjct: 307 GMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLGQGA 366
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+ P S V ++ G H+ A++E G +L WG
Sbjct: 367 QNHEDHPTLA----SLHSVICLAAGRYHSLAVAENGAVLAWG 404
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 17/193 (8%)
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
AA G S+ V G V +WG SG+LG G + L +R + L GV +K
Sbjct: 60 AAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSG----APLNGV-LK 114
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEV--VCG 296
+ AAG HS + G V+ +GD + ++ F E + I P V CG
Sbjct: 115 V-AAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACG 173
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G H+ + S G ++ WGSN +G +G G++ +P +V P + V V+ G+ H+
Sbjct: 174 GKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAG--VKAVAAGFAHS 231
Query: 354 AAIS-EGKILTWG 365
A+S +G + WG
Sbjct: 232 LALSVDGTVWAWG 244
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLN 98
WGN G+LG+G R P+ A LK A+ G H+L L G V A G
Sbjct: 298 WGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAG 357
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
D GQLG + P S V+ ++ G +HS A+ +G + WG N GQLG+G
Sbjct: 358 DRGQLGQGAQ-NHEDHPTLAS--LHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414
Query: 159 KKAAKVIPIPTK 170
K +P K
Sbjct: 415 KADKNFHALPEK 426
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-----SKLPYSEEVVCG 296
IAA G HS + +G V+ +GD + ++ + P + + L +V G
Sbjct: 59 IAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAG 118
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV---SCGWKHT 353
H+ LT+ GE++TWG N G LG G SP +V+ +P++ + +CG KH+
Sbjct: 119 ERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRH-IRTNPLENIVGAACGGKHS 177
Query: 354 AAI-SEGKILTWG 365
A+ S+G + WG
Sbjct: 178 LAVASDGTVWAWG 190
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 154/322 (47%), Gaps = 32/322 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG S +R+ PV S + A++ G H+L L G V+A G N +GQ
Sbjct: 703 WGYNGYGQLGDDSTTTRYSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNGYGQ 760
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+++ L VV I+ G S A+ DG ++ WG+N+ G+LG G
Sbjct: 761 LG-DGTTSSQRTPVQVKDLTG-VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTR 818
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ +V L+ + K A G VA+ G V +WG G+G LG+ S+I
Sbjct: 819 SSVPV--QVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGN--SSTI----- 867
Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
S+ TP GV +K AAG H+ + +G V+ +G ++ GN+ R
Sbjct: 868 --SQSTPVQ----SGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQL--GNGNNTSRS 919
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
P+ I L + G + + G LY+WG N NG LG G+ + P +V GP +
Sbjct: 920 VPAAIPGLASIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKVIGP-N 978
Query: 340 ESPVDQVSCGWKHTAAISEGKI 361
+P D + AA+S+ ++
Sbjct: 979 INPADTTAP-----AAVSDLRV 995
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKKEVVQISTGY 132
A++ G HT+F+ G V+ G N GQLG + S+ + + ++G+K I+ G
Sbjct: 633 AVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMK----MIAGGE 688
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ A+ DG L+ WG N GQLG + P+ +V L+ A G S+A+
Sbjct: 689 NHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSA--GENHSLAL 744
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V ++G G G+LG G SS + TP +K+L GV V IAA G S
Sbjct: 745 KSDGTVWAFGYNGYGQLGDGTTSS---------QRTPVQVKDLTGV-VAIAA-GKDFSLA 793
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G V+ +G ++ + P ++ L + + G YH L G ++ W
Sbjct: 794 LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 853
Query: 313 GSNENGCLGIGSIDVLHSPER--VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
G N NG LG S +P + V G + ++ G HT A+ S+G + +WG+ G
Sbjct: 854 GYNGNGELGNSSTISQSTPVQSGVTG------IKGIAAGPYHTLALKSDGTVWSWGYNG 906
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 24/324 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ S P +K +A G HT+ L G ++ G N +GQ
Sbjct: 653 WGYNGHGQLGTGTSNSTSVP--GKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQ 710
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++S L +S G +HS A+ DG ++ +G N GQLG G ++
Sbjct: 711 LG-DDSTTTRYSPVQVSTLTNWTA-VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSS 768
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A F S+A+ G V SWG G LG+G + R
Sbjct: 769 QRTPV--QVKDLTGVVAIAAGKDF--SLALKSDGTVWSWGQNTYGELGNGTTT------R 818
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S+ L+ + VK AAG H + ++G V+ +G + L ++
Sbjct: 819 SSVPVQVALLTD-----VKAIAAGDYHGVALKKDGSVFAWGYNG-NGELGNSSTISQSTP 872
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
+ S + + + G YHT L S G +++WG N G LG G+ P + G S
Sbjct: 873 VQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAIPGLAS--- 929
Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
+ ++ G + A ++G + +WG
Sbjct: 930 IASIAAGENQSIAYGNDGILYSWG 953
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 19/222 (8%)
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++A P+ G +L ++ + G V WG G G+LG G
Sbjct: 610 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTG----- 664
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S S P + L G +K+ A G H+ + +G ++ +G ++
Sbjct: 665 ----TSNSTSVPGKVINLTG--MKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT 718
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P +S L V G H+ L S G ++ +G N G LG G+ +P +V+
Sbjct: 719 RYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVK-- 776
Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
+ V ++ G + A+ S+G + W WG T+ E G+
Sbjct: 777 -DLTGVVAIAAGKDFSLALKSDGTV--WSWG--QNTYGELGN 813
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3815 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3874
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3875 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3932
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3933 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3989
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3990 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4042
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4043 RPRLVAALQGKKVNRVACGSAHT 4065
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2772
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2773 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2831
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 2832 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 2943 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 2998
Query: 386 RGQLT 390
+ Q+
Sbjct: 2999 KPQVV 3003
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2887
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2996
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3056
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3057 G-LEGQKITRVACGSSHSVA 3075
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3775 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3833
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3834 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3891
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3892 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3942
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3943 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4002
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4003 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4061
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4062 SAHTLAWSTSK 4072
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2997
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3046
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3078
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 136/286 (47%), Gaps = 24/286 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D +LG + + EP IS K VV I+ G +
Sbjct: 481 GHHYLALAATGEVYSWGCGDGRRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 539
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 597
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 648
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 649 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 708
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAA 355
+WGSN+ C ++ V PE P + ++CG ++A
Sbjct: 709 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDTKHIVGIACGPAQSSA 752
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 151/332 (45%), Gaps = 23/332 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG P C A L G L +T G +YATG G+
Sbjct: 3709 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGR 3768
Query: 103 LGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 3769 LGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3826
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3827 NRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD----- 3879
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+ +
Sbjct: 3880 ----SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3935
Query: 277 HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
+ P I L +V CG + LT G +YTWG + LG GS D + P +V
Sbjct: 3936 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 3995
Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
QG V ++ G H +E G++ TWG
Sbjct: 3996 QG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4026
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2810
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2811 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2868
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2980 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3037
Query: 370 HG 371
HG
Sbjct: 3038 HG 3039
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L + G V N +L P + GL
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYN-----------SDTLVPQLVQGL 467
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ VV+I+ + HH A+ GE+Y WG +LG G +P+ P + SG
Sbjct: 468 ASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGD----TVPLEEPKVISAFSG 523
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 571
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 632 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 690
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 691 VAAGSTHCLALTEDSEVHSWG 711
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD RLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 496 WGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 555 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 613
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 671
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 672 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ A P L +K + + CG + ++G Y W
Sbjct: 723 RVTKPEPAALPGLDTK--HIVGIACGPAQS---SAGSSXYEW 759
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 2816
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2817 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2876
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 2877 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 2932
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3704 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATG 3762
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3763 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3822
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3823 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3873
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3874 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3933
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3934 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 3988
Query: 384 LDR 386
+ R
Sbjct: 3989 VRR 3991
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3973 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4032
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4033 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + LG G L P+ + G + V ++CG ++
Sbjct: 481 GHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 540
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 541 AAITAEGELYTWGRGNYGRLGHGS-SED 567
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 27/294 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++E+GR+ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
P + L ++ GG+H+ LT GE+Y WG E+G LG+G D
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDND 286
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 121/289 (41%), Gaps = 22/289 (7%)
Query: 92 VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ A G + GQLGI N + +LEP + + +G +S AI DG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVR-------SVVSGSRNSLAICDDGTM 59
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG + K IP++V+ L+ + QAA+G +AV G+ +WG
Sbjct: 60 FTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+ G +G P+ + + V+ AAG HS + G V+ +G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ Q P + L + G +H L G L WG+NE G LG G
Sbjct: 177 PWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
P VQG + VD + GW TA +G++ WG G HG
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRL 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G + A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+V I+ G HS+A+T GE+Y WG+ +G+LGLG +P KV L+
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLA 300
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQI 128
LG+ +N S + P +++ L +E ++Q+
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQV 307
>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Sarcophilus harrisii]
Length = 612
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 32/347 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P + F + LK L GG H+ +T+ G ++ GLN G
Sbjct: 194 WGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTDEGELFVCGLNKDG 253
Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ +E++ + ++G V+Q+S G+ + +T +G++ G NS GQLGL
Sbjct: 254 QLGLGHTEDVLSFIPCTPLAGCP--VLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPP 311
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSI 217
+ + IP +E L+ AA G ++A T G V WG G +GR E ++
Sbjct: 312 GTKRQV-IPQVIELLNEKVVCIAA-GMRHALAATESGLVFQWGTGLASTGRR-TCPEKTL 368
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
FL + P + LE KVK AG HSA + + G +Y++G ++L
Sbjct: 369 PPFLTAKE---PCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNKHGQLL-SPAAF 424
Query: 278 ARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG---------IGS 324
P I + E V G H T G+++TWG + G LG G
Sbjct: 425 LPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADYGQLGTKVDGQERCTGD 484
Query: 325 IDVLHSPERVQGPFSES-P----VDQVSCGWKHTAAISEGKILTWGW 366
++L S R S P V +++CG +H A+ +WGW
Sbjct: 485 HELLLSCTRTLATMPSSLPCLEGVTEMACGSEHNLAVVGSSCYSWGW 531
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 147/342 (42%), Gaps = 44/342 (12%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E + C+ + ++CG T+ LTE G V + G N FGQLG+
Sbjct: 253 GQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPPG 312
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIP 166
+ P I L ++VV I+ G H+ A T G ++ WG G G++ K +P
Sbjct: 313 TKRQVIPQVIELLNEKVVCIAAGMRHALAATESGLVFQWG---TGLASTGRRTCPEKTLP 369
Query: 167 I------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P +V L K G S ++T G++ WG+ HGQ S F
Sbjct: 370 PFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSN-----KHGQLLSPAAF 424
Query: 221 LRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA--------VDKM 270
L TP+ I+ + KV + +G+ H E G+V+ +G RA VD
Sbjct: 425 L-----PTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWG-RADYGQLGTKVDGQ 478
Query: 271 LFQEGNH----------ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G+H A PS + L E+ CG H + G Y+WG NE+G
Sbjct: 479 ERCTGDHELLLSCTRTLATMPSSLPCLEGVTEMACGSEHNLAVV-GSSCYSWGWNEHGMC 537
Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
G G+ + P+ V+ P S + V CG H+ A+ + L
Sbjct: 538 GDGTEVNVWVPKPVESP-SLALCLLVGCGAGHSLAVGQAPAL 578
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+LSWGA G+LG G + +L R P+ +K L G G HSA + + G
Sbjct: 191 LLSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTG--------GGGHSAVVTDEG 242
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWG 313
+++ G ++ G+ S I P + +V CG T +LT G++ + G
Sbjct: 243 ELFVCGLNKDGQLGL--GHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCG 300
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
SN G LG+ +V +E V ++ G +H A +E G + WG G
Sbjct: 301 SNSFGQLGLPPGTKRQVIPQVIELLNEK-VVCIAAGMRHALAATESGLVFQWGTG 354
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 42 LWGNGDYGRL-GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG+ +G+L + + + F+ + + G H + TETG V+ G D+
Sbjct: 409 VWGSNKHGQLLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADY 468
Query: 101 GQLG----------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
GQLG +S + P + L+ V +++ G H+ A+ V
Sbjct: 469 GQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG-VTEMACGSEHNLAV-VGSSC 526
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
Y WG N +G G G + +P P + L+
Sbjct: 527 YSWGWNEHGMCGDGTEVNVWVPKPVESPSLA 557
>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 43/336 (12%)
Query: 43 WGNGDYGRLGLGSL---ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGL 97
WG GRLG G L E + P H +K L ACG HTL L G VY+ G
Sbjct: 54 WGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDG-VYSWGS 112
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+++GQLG + ++ P+ ++ L K+ + + G++HS A++ D ++Y WG +GQLG
Sbjct: 113 SEYGQLGQGDTQQHT-RPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLG 171
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L ++P + V LSG F Q A G+ + +T GKV ++G G G+LG
Sbjct: 172 LDSIEDALLP--SHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQLG------ 223
Query: 217 ILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
L +TS+ T P+L++ LE ++ + G + + +++ +G
Sbjct: 224 ----LGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWG----------RS 269
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
H R +I CG +H +T +++TWG N++G LG S+D L P V
Sbjct: 270 PHYFRFHMIH---------CGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVV 320
Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
Q +ES V S G + + A+ + G++ WG S
Sbjct: 321 QK-LNESFVATASVGAEFSVAMDATGQVWVWGRSDS 355
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 19/260 (7%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGI 177
++ + V++S G HH++ ++ G++Y WGK+ G+LG G ++ K +P ++ + I
Sbjct: 28 VQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRI 87
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELE 236
A G E ++A+ G V SWG+ G+LG G T ++T P + EL
Sbjct: 88 KVLSVACGIEHTLALCRDG-VYSWGSSEYGQLGQG----------DTQQHTRPVYVTELS 136
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
K G HS + + +VY +G ++ A PS ++ L + ++
Sbjct: 137 DKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLA 196
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
G HT VLT+ G++YT+G G LG+G+ P+ VQ + + + CG T
Sbjct: 197 AGYSHTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQA-LEKDRIYLICCGSFETV 255
Query: 355 AI-SEGKILTWGWGGSHGTF 373
A+ SE K+ WG + F
Sbjct: 256 AVSSEQKLFNWGRSPHYFRF 275
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-------- 94
WG G +G+LGL S+E P ++ + LA G +HT LT G VY
Sbjct: 162 WGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQ 221
Query: 95 -----TGLNDFGQL--GISENIGY-----SLEPLRISGLKK-----------EVVQISTG 131
T QL + ++ Y S E + +S +K I G
Sbjct: 222 LGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWGRSPHYFRFHMIHCG 281
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H A+T +++ WG N +GQLG ++ PT V+ L+ F A++G E SVA
Sbjct: 282 NWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLL-FPTVVQKLNESFVATASVGAEFSVA 340
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ G+V WG SG+ H I
Sbjct: 341 MDATGQVWVWGRSDSGQSLHSSSEEI 366
>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
Length = 1035
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 149/339 (43%), Gaps = 48/339 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
WG G GRLG P + + +K +ACG HT LT++G VY G
Sbjct: 328 WGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSD 387
Query: 97 LNDFGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
L D G++ ++ +E + IS I+ G H++ ++ G L+ +G + G
Sbjct: 388 LVDEGRIRSQWLTHKFSLPVEGISISS-------IACGEWHTAIVSSCGRLFTYGDGTFG 440
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLSWG 202
LG G + P +VE L G+ + A G + A+ T GK+ +WG
Sbjct: 441 VLGHGNYHS--FSSPKEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWG 498
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GRLGH + ++ P + +L + G + + + G+V+
Sbjct: 499 DADEGRLGHAD---------NVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAM 549
Query: 263 GDRAVDKMLFQEGN-HARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
G ++ GN H + +++ K Y + + CG YH VLTS G +YTWG EN
Sbjct: 550 GSAKYGQL----GNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGEN 605
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
G LG+G + ++P V+ + VD ++CG T AI
Sbjct: 606 GELGLGDTENRYTPCFVEA-LRDRQVDTITCGPSFTVAI 643
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + ALG + VT G+V WG G GRLG + I
Sbjct: 294 VPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDI--------- 344
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
+P+++ L ++VK A G H+ + ++G VY +G + L EG R L K
Sbjct: 345 SSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSD-LVDEG-RIRSQWLTHK 402
Query: 287 LPYSEE------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
E + CG +HT +++S G L+T+G G LG G+ SP+ V+
Sbjct: 403 FSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVES-LKG 461
Query: 341 SPVDQVSCGWKHTAAISE------------GKILTWG 365
V V+CG HTAAI E GK+ TWG
Sbjct: 462 LCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWG 498
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 118/274 (43%), Gaps = 25/274 (9%)
Query: 107 ENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+N YSL P L S +V ++ G +H++ +T GE+Y WG+ G+ LG++ I
Sbjct: 287 QNSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGR--LGQRIDMDI 344
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P V+ LS I K+ A G + A+T G V +WG L G +RS
Sbjct: 345 SSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDE------GRIRS-Q 397
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
T + +EG+ + A G H+A + GR++ +GD + + P +
Sbjct: 398 WLTHKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVE 457
Query: 286 KLP--YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIGSIDVLHSPE 332
L V CG +HT + TS G+L+TWG + G LG P
Sbjct: 458 SLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPT 517
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
V V QVSCG T A++ GK+ G
Sbjct: 518 CVSQLVDYDFV-QVSCGRMMTLALTNMGKVFAMG 550
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V+ WG G +G E + + S P+L++ + V+ A G H+A + + G
Sbjct: 267 VMIWGGGIGCLVGIVNERFVQNSIYS---LVPKLLESTAMLDVQNVALGGNHAAIVTKQG 323
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ + P ++ L ++V CG YHTC LT G++YTWG +
Sbjct: 324 EVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKD 383
Query: 316 E-NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
+ + G I + P + ++CG HTA +S G++ T+G GTF
Sbjct: 384 SCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYG----DGTF 439
Query: 374 SEDGH 378
GH
Sbjct: 440 GVLGH 444
>gi|427788267|gb|JAA59585.1| Putative e3 ubiquitin-protein ligase herc3 [Rhipicephalus
pulchellus]
Length = 458
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 145/304 (47%), Gaps = 29/304 (9%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKE 124
E + +ACG +H++ LT+ ++ G N FGQ G E+ P ++ G++ +
Sbjct: 167 ESTRILRVACGRSHSIVLTDKEGAFSFGNNSFGQCGRPVVTDESPESCATPRQVQGIRGK 226
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+V + G H+ +T +G +Y G +++GQ GLG ++ P + LSG+ + A
Sbjct: 227 IVDVVCGQDHTLFLTDEGAVYSCGWSADGQTGLGIYGSQGTPKRVNGD-LSGVHIVRIAG 285
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
+ +AV+ G + WG G+ G + + F R+ + KVK A
Sbjct: 286 TVDCILAVSDSGDLFGWGNSEYGQFGRQTDDKQMCFARNLN---------FPHGKVKAVA 336
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK--------LPYSE--EVV 294
+G + E+G VY++G + L E + P+L+ + P ++ ++
Sbjct: 337 SGGTMCGVVTESGDVYVWGYGLLG--LGPEVSVKTVPTLLPRPLFGANRFAPDTQVVDLF 394
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
CG H L S GELYTWG N NGCLG+G H P RV + + +VSCG HTA
Sbjct: 395 CGLNHFAALNSRGELYTWGKNRNGCLGLGHSMDQHFPFRVS---LTAKILKVSCGVDHTA 451
Query: 355 AISE 358
+S+
Sbjct: 452 VLSQ 455
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 31/169 (18%)
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----- 290
E ++ A G HS + + + FG+ + RP + + P S
Sbjct: 167 ESTRILRVACGRSHSIVLTDKEGAFSFGNNSF--------GQCGRPVVTDESPESCATPR 218
Query: 291 ---------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+VVCG HT LT G +Y+ G + +G G+G +P+RV G S
Sbjct: 219 QVQGIRGKIVDVVCGQDHTLFLTDEGAVYSCGWSADGQTGLGIYGSQGTPKRVNGDLSGV 278
Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGS-HGTFSEDGHSSGGQLDRGQL 389
+ +++ A+S+ L +GWG S +G F G Q D Q+
Sbjct: 279 HIVRIAGTVDCILAVSDSGDL-FGWGNSEYGQF-------GRQTDDKQM 319
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4312 SAHTLAWSTSK 4322
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4238
Query: 384 LDR 386
+ R
Sbjct: 4239 VRR 4241
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 1100 WGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 1159
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 1160 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 1217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 1218 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 1275 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1327
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 1328 RPRLVAALQGKKVNRVACGSAHT 1350
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 150/328 (45%), Gaps = 21/328 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 53 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 112
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 113 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 171
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 172 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 225
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 226 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 280
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 281 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 340
Query: 336 GPFSESPVDQVSCGWKHTAAISEGKILT 363
G + +V+CG H+ A + + T
Sbjct: 341 G-LEGQKITRVACGSSHSVAWTTVDVAT 367
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G G+LG N
Sbjct: 1060 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLG-HGNRSPCDR 1118
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 1119 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 1176
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 1177 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 1227
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 1228 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1287
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 1288 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 1346
Query: 350 WKHTAAISEGKILTWG 365
HT A S K + G
Sbjct: 1347 SAHTLAWSTSKPASAG 1362
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 148/301 (49%), Gaps = 20/301 (6%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLND QLG + + + VVQ++ G A+TV+G++Y G+ +NG+L
Sbjct: 1 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
GLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+LGH
Sbjct: 61 GLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH-- 117
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
F R + PRLI+ L+ +++ A G HSA + +G +Y +G ++
Sbjct: 118 ------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 170
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
+ +P ++ L +V CG T LT G +++WG + G LG G + +
Sbjct: 171 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 230
Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQL 389
P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S + + Q+
Sbjct: 231 IPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVRKPQV 286
Query: 390 T 390
Sbjct: 287 V 287
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 107 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 166
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 167 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 224
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 225 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 282 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 330
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 331 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 362
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 994 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1051
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 1052 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAKDGKLG 1109
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 1110 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1164
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 1165 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 1219 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1278
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 1279 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 1311
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 35 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 94
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 95 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 152
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 153 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 203
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 204 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 263
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 264 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 321
Query: 370 HG 371
HG
Sbjct: 322 HG 323
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 989 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 1048 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGK 1107
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 1108 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1158
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 1159 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 1219 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 1273
Query: 384 LDR 386
+ R
Sbjct: 1274 VRR 1276
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 1258 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 1317
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 1318 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 1352
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 547 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 605
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 606 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 663
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 664 TDNGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 714
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 715 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 774
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 775 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 819
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 533
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 534 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 589
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 590 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 637
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + +NG+V+ +GD K+ + + P LI KL
Sbjct: 638 MLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 697
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 698 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 756
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 757 VAAGSTHCLALTEDSEVHSWG 777
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 562 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 620
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 621 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGK 679
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 680 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 737
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 738 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 788
Query: 271 LFQEGNHARRPSLISK 286
+ A P L +K
Sbjct: 789 RVTKPEPAALPGLDTK 804
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 253 IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+ NGRVY + + L Q G +R +++ +S+ G+H L + GE+Y
Sbjct: 509 LSRNGRVYTQAYNSDTLAPQLVQ-GLASR--NIVKIAAHSD-----GHHYLALAATGEVY 560
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 366
+WG + G LG G L P+ + G + V ++CG ++AAI+ EG++ TWG
Sbjct: 561 SWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG- 619
Query: 367 GGSHGTFSEDGHSS 380
G + GH S
Sbjct: 620 ---RGNYGRLGHGS 630
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 724 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 783
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L +++ EP + GL K +V I+ G S A
Sbjct: 784 HFDTLRVTKP-----EPAALPGLDTKHIVGIACGPAQSFA 818
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 152/321 (47%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + GL
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN-------SDTLG----PQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + VD
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3063
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3123
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G + +T D ++ WG G+LG G + +P K++ L+G+ + G + S
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFS 4081
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA+T G V +WG G RLGHG + + PR ++ L+G KV A G LH
Sbjct: 4082 VALTKSGAVYTWGKGDYHRLGHGSDDHV---------RRPRQVQGLQGKKVIAIATGSLH 4132
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHT 300
C E+G VY +GD ++ N +RP L++ L V CG HT
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4185
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 102/250 (40%), Gaps = 43/250 (17%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV--- 198
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEAL 4012
Query: 199 --------------------------LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
SWG G G+LG G S P I
Sbjct: 4013 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMKI 4063
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4064 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4123
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4124 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGS 4182
Query: 351 KHTAAISEGK 360
HT A S K
Sbjct: 4183 AHTLAWSTSK 4192
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P+ + + + CG ++ LT++G VY G D+ +
Sbjct: 4041 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4100
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + P ++ GL+ K+V+ I+TG H T DGE+Y WG N GQLG G
Sbjct: 4101 LGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4159
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
A I P V L G + A G ++A
Sbjct: 4160 A--IQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 67 AFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
A + + + +ACG A TL LT+ V++ G D+G+LG + G + P++I L
Sbjct: 4011 ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV-PMKIDSLTGL 4069
Query: 125 -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
VV++ G S A+T G +Y WGK +LG G + P +V+ L G A
Sbjct: 4070 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH--VRRPRQVQGLQGKKVIAIA 4127
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G V T G+V +WG G+LG G ++I PRL+ L+G K+
Sbjct: 4128 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI---------QRPRLVAALQGKKINRV 4178
Query: 244 AAGFLHS 250
A G H+
Sbjct: 4179 ACGSAHT 4185
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A G AC + NGRVY+ + + L Q G +R +++ +S+
Sbjct: 449 LANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLGPQLVQ-GLASR--NIVKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+++WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-----EPTALPGLDTKHIVGIACGPAQSFA 776
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 165/347 (47%), Gaps = 38/347 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK--HSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +LG G +++ P + S + + + ++ G H + TG ++ GL D
Sbjct: 183 WGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDH 242
Query: 101 GQLGIS--ENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ Y P R+ LK EV V ++ G + S+ I+ D +++ WG S GQLG
Sbjct: 243 GRLGLKSGKDVPY---PTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGH 299
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+K+ + +P V L I Q ALG+E A++ G V +WG G G+LGHG
Sbjct: 300 VEKSDEW--LPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD---- 353
Query: 218 LGFLRSTSEYTP-RLIKELEGVKVKIA--------AAGFLHSACIDENGRVYIFGDRAVD 268
L S S TP +L+ ELE ++A A G + + + GR+ FG
Sbjct: 354 ---LNSCS--TPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFG 408
Query: 269 KMLFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
+ E A RP LI S++ V G H +TS G +YTWG G +G +
Sbjct: 409 ALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468
Query: 325 IDVLHSPERVQGPFS-ESPVDQ----VSCGWKHTAAIS-EGKILTWG 365
+P + P+ E P+D+ SCG +T +S +G +L G
Sbjct: 469 RRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVLVLG 515
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPL-----RISGLKKEVVQISTGYHHSSAITVDGELYM 146
++A G + QLG + Y +P ++ L ++ +S G H +AI G+L+
Sbjct: 180 LFAWGCSHNYQLGTGQ---YQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFT 236
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG +G+LGL K+ K +P PT+V+ L G S ++ KV +WG+G
Sbjct: 237 WGLCDHGRLGL--KSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSK 294
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH ++S E+ PR + L + + A G+ H A + +G VY +G+
Sbjct: 295 GQLGHVEKS---------DEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGE 345
Query: 267 VDKMLFQEGNHARRP-SLISKLPYSE-EV---------VCGGYHTCVLTSGGELYTWGSN 315
++ + N P L+ +L + EV CG T +LT G L ++G +
Sbjct: 346 HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMS 405
Query: 316 ENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
E G LG+G + P + + +S G +H AA+ S+G + TWG G
Sbjct: 406 EFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQG 459
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 141/329 (42%), Gaps = 30/329 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+GRLGL S + P + + + CG + ++ V+ G GQ
Sbjct: 237 WGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQ 296
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E L P ++ L +VQ++ GY H +A+++DG++Y WG+ +GQLG G
Sbjct: 297 LGHVEKSDEWL-PRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLN 355
Query: 162 AKVIP--IPTKVECLSGIFTKQA-----ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ P + ++E +G A G ++ +T G+++S+G G LG G++
Sbjct: 356 SCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEK 415
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
T R++ + V + +AG H A + G VY +G +
Sbjct: 416 R----LAARPHLITSRIMDKRRFVHL---SAGDEHCAAVTSKGNVYTWGQGCFGAV---- 464
Query: 275 GNHARR----PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC---LGIGSIDV 327
G ARR P K PY E+ C + GG YT +++GC LG S ++
Sbjct: 465 GKPARRAYSNPPDCRK-PYKLELPLDK-RACATSCGGN-YTVILSKDGCVLVLGDDSTEI 521
Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI 356
P S V CG H+ AI
Sbjct: 522 RPMLYDESNPASVMKASSVLCGRYHSGAI 550
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H VLT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS---------KHIVGIACGPAQSFAW 777
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4312 SAHTLAWSTSK 4322
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 146/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+ +T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 147/321 (45%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H ++E ++ +WG
Sbjct: 715 VAAGSTHCLVLTEDSEVHSWG 735
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +A G +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P ++ L + A G S +T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ G H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4238
Query: 384 LDR 386
+ R
Sbjct: 4239 VRR 4241
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G + +T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GL+ K+V+ ++ G H +T D E++ WG N Q L
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 746
Query: 156 GLGKKAAKVIP 166
G+ K P
Sbjct: 747 GVTKPEPTAFP 757
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 153/334 (45%), Gaps = 20/334 (5%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WGN + L + G+L+ +P + E ++ ++ G HTL+L+ G +Y G N+
Sbjct: 4 WGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNE 63
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GQLG N P+ + K + I+ G HS A+ G+ + WG +S GQLG
Sbjct: 64 VGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSN 123
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG A P ++ L+ Q A G +V +T G + +WGA G+ G G
Sbjct: 124 LGSHAQDK---PKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGN--- 177
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
RS E TP+ + + G+ + + A G H+ + ++G V+ +G + ++ Q+
Sbjct: 178 -----RSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRE 232
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
P+ + L + + CG T LT G ++T G+ E G G G+ P +V
Sbjct: 233 SRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKV 292
Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
S V QV+CG +H +IL G+G
Sbjct: 293 ME-LMGSTVTQVACGRRHMLCRVGERILACGYGA 325
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 18/235 (7%)
Query: 144 LYMWGKNSNGQLGL---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
++ WG ++ +L + G + P +K + S I +Q + G ++ ++ G + +
Sbjct: 1 MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHI--QQISAGEFHTLYLSNNGHLYT 58
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G+ G+LG S+ +P L+ +G + A G HS +DE G+ +
Sbjct: 59 CGSNEVGQLGRQTNSA--------DGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPF 110
Query: 261 IFGDRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
+G ++ ++ G+HA+ +P +I L +V CG YHT VLT+ G+LY WG+N
Sbjct: 111 SWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSY 170
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
G G+G+ + + P+ ++CG HT A+S+ G + WG SHG
Sbjct: 171 GQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWG-KNSHG 224
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL ESR P + ++CG T FLT G V+ G ++GQ
Sbjct: 218 WGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQ 277
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G N L P ++ L V Q++ G H V + G + GQLG A
Sbjct: 278 TG-HGNTKDELVPRKVMELMGSTVTQVACGRRH-MLCRVGERILACGYGARGQLGCPHMA 335
Query: 162 AKVIPIPT 169
++P P
Sbjct: 336 FALVPTPV 343
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2721 GEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2780
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2781 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2839
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2840 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2893
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2894 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2948
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 2949 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3008
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3009 G-LEGQKITRVACGSSHSVA 3027
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 137/298 (45%), Gaps = 36/298 (12%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q +AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQPLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TDNGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WG+N+ D LH PE P ++ KH I+ G ++ W
Sbjct: 733 SWGNNDQ----CQHFDTLHQTKPEPSLLPGLDT---------KHIVGIACGPAQSFAW 777
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2775 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2834
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2835 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2892
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2893 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2949
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 2950 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2998
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2999 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3030
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 20/272 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V PIP +V LS K+ A+
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTV-PIPRQVTALSSYVVKKVAV 2756
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 2757 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 2807
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
A G HSA + +G +Y +G ++ + +P ++ L +V CG
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2867
Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
T LT G +++WG + G LG G + + P+ ++ + V Q+ CG + + A+++
Sbjct: 2868 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIER-LNGQGVCQIECGAQFSLALTK 2926
Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLDRGQLT 390
++ W WG G + GH S + + Q+
Sbjct: 2927 SGVV-WTWG--KGDYFRLGHGSDVHVRKPQVV 2955
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 2703 GGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 2762
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2763 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2820
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2821 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2871
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2872 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2931
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2932 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 2989
Query: 370 HG 371
HG
Sbjct: 2990 HG 2991
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + +NG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++ + +D
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 118/230 (51%), Gaps = 21/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+ P+L++ L+G KV AAG H + E+ V+ +G+
Sbjct: 696 EHV---------RYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGN 736
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 70/377 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3636 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3693
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3694 GRLGVGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3751
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L G A G S VT G + +WG G GRLGH
Sbjct: 3752 HGNRSP--CDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD--- 3806
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKM---- 270
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3807 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3860
Query: 271 ------------------------------LFQEGNH----------ARRPSLISKLPYS 290
+ +G++ RRP + L
Sbjct: 3861 SDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGK 3920
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
+ + G H T GE+YTWG N+ G LG G+ + + P R+ V++V+C
Sbjct: 3921 KVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGRKVNRVAC 3979
Query: 349 GWKHTAAISEGKILTWG 365
G HT A S K + G
Sbjct: 3980 GSAHTLAWSTSKPASAG 3996
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
I +P+ E LS + Q A G + AVT GKV + G +GRLG G S + R
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
+ + ++K KV + + G H+ + +G+V+ +G+ K+ + +P LI
Sbjct: 2744 TALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2797
Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
L ++ CG H+ LTS GELYTWG E G LG G P+ V+
Sbjct: 2798 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR- 2856
Query: 343 VDQVSCGWKHT---AAISEGKILTWGWG 367
V QV+CG + A EG + +WG G
Sbjct: 2857 VIQVACGSRDAQTLALTDEGLVFSWGDG 2884
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 20/243 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3631 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3688
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+ P L++ ++ V ++ A +G H + G V
Sbjct: 3689 GYGAGGRLGVGGTESV---------SAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ + RP ++ L +E ++ GG H+ +TS G+LYTWG
Sbjct: 3740 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRY 3799
Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWG-GSHGTFS 374
G LG + P+ V+ VD V+CG T +++ + W WG G +G
Sbjct: 3800 GRLGHSDSEDQLKPKLVEALQGHRVVD-VACGSGDAQTLCLTDDDTV-WSWGDGDYGKLG 3857
Query: 375 EDG 377
G
Sbjct: 3858 RGG 3860
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G G + WG G+LG + + + + T R ++ + G + A +
Sbjct: 3629 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3679
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
+G++Y G A ++ P+L+ + + V GG H L+S GE+
Sbjct: 3680 TADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739
Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
Y+WG E+G LG G+ P V+ VD ++ G H+A + S G + TWG
Sbjct: 3740 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVD-IAAGGAHSACVTSAGDLYTWG--- 3795
Query: 369 SHGTFSEDGHSSGGQLDRGQLTP 391
G + GHS QL P
Sbjct: 3796 -KGRYGRLGHSDS----EDQLKP 3813
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A G AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQ-GLASR--NIVKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + A + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
F L ++ EP + GL K +V I+ G S + W S +GL
Sbjct: 742 HFDTLHQTKP-----EPSLLPGLDTKHIVGIACGPAQS---------FAWSSCSEWSVGL 787
Query: 158 GKKAAKVIPIPTKVECLSGIFTK 180
+P V+ SG F +
Sbjct: 788 R--------VPFVVDVCSGTFEQ 802
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
K ++A+ CG + L+E G VY + L + + + V Q++
Sbjct: 74 KEKIEAVGCGDDEVILLSEKGSVYRVDVTQ----------ALYLPRMLEAFCRIPVSQVA 123
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H+ A+T +G++Y WG+NS GQLGLGKK I P V LSG+ Q + G + S
Sbjct: 124 CGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCS-ISSPQCVRSLSGMPLVQVSAGGDHS 182
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A++ G V WG G+LG G S TP + L K + G H
Sbjct: 183 FALSVSGSVFGWGRNDCGQLGLGD---------SQDRCTPTSVDSLNLKKTTSISCGKDH 233
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGG 307
+A + ++G V+ FG ++ + RP L+++L + CG YHT VL
Sbjct: 234 TAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENN 293
Query: 308 ELYTWGSNENGCLG 321
++Y++G N+ LG
Sbjct: 294 KIYSFGCNDQNQLG 307
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG + R P + +++CG HT LT+ G V+ G FGQ
Sbjct: 194 WGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQ 253
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L +V +I+ G +H+ + + ++Y +G N QLG +
Sbjct: 254 LGHNSSRN-ELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDS 312
Query: 162 AKVIPIPT 169
+P+P
Sbjct: 313 HPSVPLPV 320
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 51/210 (24%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
++ + P + AF + + +ACG HT+ LT+ G VY G N GQLG+ + P
Sbjct: 103 QALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ 162
Query: 117 RISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI-------- 167
+ L +VQ+S G HS A++V G ++ WG+N GQLGLG + P
Sbjct: 163 CVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222
Query: 168 -PTKVEC---LSGIFTK--------------------------------------QAALG 185
T + C + I TK + A G
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACG 282
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
++ + K+ S+G +LG +S
Sbjct: 283 RYHTLVLQENNKIYSFGCNDQNQLGRSNDS 312
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
K+ + G G + ++ S+ + + Y PR+++ + V A G H+ + +
Sbjct: 76 KIEAVGCGDDEVILLSEKGSVYRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKE 135
Query: 257 GRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTW 312
G+VY +G + ++ L ++G P + L P + V GG H+ L+ G ++ W
Sbjct: 136 GQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQ-VSAGGDHSFALSVSGSVFGW 194
Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
G N+ G LG+G +P V + +SCG HTA +++ G + T+G G
Sbjct: 195 GRNDCGQLGLGDSQDRCTPTSVDS-LNLKKTTSISCGKDHTAILTKHGTVFTFG----SG 249
Query: 372 TFSEDGHSSGGQLDRGQLTP 391
F + GH+S R +L P
Sbjct: 250 QFGQLGHNSS----RNELRP 265
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4313 SAHTLAWSTSK 4323
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4239
Query: 384 LDR 386
+ R
Sbjct: 4240 VRR 4242
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4284 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A G AC + NGRVY + + L Q G +R ++I +S+
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQ-GLASR--NIIKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3975 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4034
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4035 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4092
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4093 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4149
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4150 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4202
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4203 RPRLVAALQGKKVNRVACGSAHT 4225
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 415 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 473
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 531
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 532 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 582
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H VLT E++
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 642
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 643 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS---------KHIVGIACGPAQSFAW 687
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3935 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3993
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3994 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4051
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4052 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4102
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4103 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4162
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4163 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4221
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4222 SAHTLAWSTSK 4232
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2872 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2931
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2932 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2990
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 2991 GH--------FSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3042 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3101
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3102 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3157
Query: 386 RGQLT 390
+ Q+
Sbjct: 3158 KPQVV 3162
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 146/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2928 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2987
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+ +T GELY WG G+LG G
Sbjct: 2988 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3046
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3047 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3100
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3101 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3155
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3156 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3215
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3216 G-LEGQKITRVACGSSHSVA 3234
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3869 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3926
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3927 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3984
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3985 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4039
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4040 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4153
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4154 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4186
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 147/321 (45%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 401
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 457
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 505
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 566 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 624
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H ++E ++ +WG
Sbjct: 625 VAAGSTHCLVLTEDSEVHSWG 645
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +A G +H+ LT +G +Y GL ++G+
Sbjct: 2982 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3042 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3099
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3100 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3156
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3157 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3205
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3206 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3237
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2910 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 2969
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P ++ L + A G S +T
Sbjct: 2970 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3027
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3028 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3078
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3079 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3138
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3139 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3196
Query: 370 HG 371
HG
Sbjct: 3197 HG 3198
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 430 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 488
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 489 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 548 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 605
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 606 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2864 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2921
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 2975
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ G H+ LTS GELYTWG
Sbjct: 2976 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3035
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3036 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3091
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3864 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3922
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3923 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3982
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3983 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4033
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4034 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4094 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4148
Query: 384 LDR 386
+ R
Sbjct: 4149 VRR 4151
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 486 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 546 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 604
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G + +T +V SWG+
Sbjct: 605 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 599
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GL+ K+V+ ++ G H +T D E++ WG N Q L
Sbjct: 600 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 656
Query: 156 GLGKKAAKVIP 166
G+ K P
Sbjct: 657 GVTKPEPTAFP 667
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4133 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4192
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4193 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4227
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 359 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 414
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 415 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 470
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 471 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 501
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4190
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4191 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4248
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4249 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4305
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4306 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4358
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4359 RPRLVAALQGKKVNRVACGSAHT 4381
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 3028 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3087
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3088 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3146
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3147 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3198 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3257
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3258 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3313
Query: 386 RGQLT 390
+ Q+
Sbjct: 3314 KPQVV 3318
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3084 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3143
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3144 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3202
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3203 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3256
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3257 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3311
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3312 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3371
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3372 G-LEGQKITRVACGSSHSVA 3390
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4091 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4149
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4207
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4208 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4258
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4318
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4377
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4378 SAHTLAWSTSK 4388
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 573 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 631
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 632 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 689
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 690 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 740
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 741 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 800
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 801 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 845
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3138 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3198 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3255
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3256 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3312
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3313 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3361
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3362 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3393
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 559
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 615
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 616 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 663
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 723
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 724 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 782
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 783 VAAGSTHCLALTEDSEVHSWG 803
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 4025 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4082
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4083 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4140
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4195
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4196 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4309
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4310 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4342
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3066 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3125
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3126 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3183
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3184 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3234
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3235 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3294
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3295 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3352
Query: 370 HG 371
HG
Sbjct: 3353 HG 3354
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 588 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 646
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 647 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 705
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 706 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 763
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 764 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 3020 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3077
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3131
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3132 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3191
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3192 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3247
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 4020 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4078
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4079 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4138
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4139 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4189
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4190 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4250 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4304
Query: 384 LDR 386
+ R
Sbjct: 4305 VRR 4307
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 644 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 703
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 704 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 762
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 763 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 698 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 757
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 758 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 814
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 815 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 844
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4348
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4349 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4383
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 517 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 572
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 573 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 628
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 629 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 659
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 149/317 (47%), Gaps = 55/317 (17%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG+ +S + P S +KAL+CGG+H+LF+TE G +YATG G
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSF--PMPVKALSCGGSHSLFITEDGRLYATGRGKEG 159
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG S+ S +++ V G S T G+++ +G + GQLGLG +
Sbjct: 160 QLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLG-Q 218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ P +V L+G + A G + AVT GK+ +WG G SG+LG+G +
Sbjct: 219 FARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDV--- 275
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P L++EL+ ++V+ A G H+ + DR + + L
Sbjct: 276 ------SLPVLVRELQNLRVQSVACGCDHTVAVI---------DRGLKEQLM-------- 312
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
LIS + VL S GE++ G G LG G D++ SP +
Sbjct: 313 --LIS--------------SQVLES-GEVFVMGRGREGQLGRG--DIVESP----AVYRS 349
Query: 341 SP--VDQVSCGWKHTAA 355
P V QV+CG HT A
Sbjct: 350 VPLQVQQVACGTSHTLA 366
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 138/301 (45%), Gaps = 26/301 (8%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G LG+ E + L P +++ + V +S G+ H++AI G++++WG+ +GQLGLG
Sbjct: 60 GLLGLGETLDV-LYPQKVN--LEGVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTN 116
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P + K + G S+ +T G++ + G G G+LG G + S+L
Sbjct: 117 KSHFTPQPLSFP----MPVKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVL-- 170
Query: 221 LRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
+P ++ EG +VK A G S E+G+V+ FG ++ L Q +A
Sbjct: 171 -------SPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYA 223
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P ++ L + G YH +TS G+LYTWG +G LG G+ + P V+
Sbjct: 224 MTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVR- 282
Query: 337 PFSESPVDQVSCGWKHTAAI-----SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
V V+CG HT A+ E +L G G GQL RG +
Sbjct: 283 ELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVE 342
Query: 392 S 392
S
Sbjct: 343 S 343
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 13/179 (7%)
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+LG + P+ + LEGV +AG H+A I G V+++G ++
Sbjct: 61 LLGLGETLDVLYPQKVN-LEGVTC--VSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNK 117
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
P +S + + CGG H+ +T G LY G + G LG GS + + SP VQ
Sbjct: 118 SHFTPQPLSFPMPVKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVLSPVEVQM 177
Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSED-GHSSGGQLDRGQLTPSE 393
P V CG + +E G++ T+G S+D G GQ R +TP E
Sbjct: 178 PEGSGRVKAAECGKDFSVIATESGQVFTFG--------SDDYGQLGLGQFARYAMTPKE 228
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4008 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4067
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4068 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4126 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4183 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4235
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4236 RPRLVAALQGKKVNRVACGSAHT 4258
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2965 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3024 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3075 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3134
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3135 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3190
Query: 386 RGQLT 390
+ Q+
Sbjct: 3191 KPQVV 3195
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2961 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3020
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3021 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3079
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3080 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3133
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3134 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3188
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3189 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3248
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3249 G-LEGQKITRVACGSSHSVA 3267
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3968 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4026
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4027 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4084
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4085 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4135
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4136 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4195
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4196 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4254
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4255 SAHTLAWSTSK 4265
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 678 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 722
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3015 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3075 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3132
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3133 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3189
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3190 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3238
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3239 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3270
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 659
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 660 VAAGSTHCLALTEDSEVHSWG 680
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3902 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3959
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3960 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4017
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4018 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4072
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4073 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4186
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4187 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4219
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3002
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3060
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3061 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3111
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3112 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3171
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3172 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3229
Query: 370 HG 371
HG
Sbjct: 3230 HG 3231
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2897 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3008
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3009 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3068
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3069 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3124
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3956 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4015
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4016 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4067 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4127 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4181
Query: 384 LDR 386
+ R
Sbjct: 4182 VRR 4184
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 691
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 692 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 721
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4166 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4225
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4226 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 394 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 449
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 450 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 505
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 506 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 536
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4312 SAHTLAWSTSK 4322
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 777
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4238
Query: 384 LDR 386
+ R
Sbjct: 4239 VRR 4241
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 561 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACH 293
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 294 STHTSAAKTQGGHVYMWG 311
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 60 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L GV + A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPLQIM 286
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 23/261 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + T + E++++G N + LG G + ++P K+E
Sbjct: 19 LSPQEIASIRKACV-FGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVP--KKLE 75
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + + T G+V +WG G +LG+G + TP
Sbjct: 76 ALCG--KKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGA---------TNQGVTP 124
Query: 230 -RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
++ L KV A G HS + +G +Y +G ++ + P +S
Sbjct: 125 VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCL 184
Query: 289 YSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ VV CG + + + GE+Y WG N NG LG+G+ +P RV + Q
Sbjct: 185 QDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRV-AALHGVCILQ 243
Query: 346 VSCGWKHTAAIS-EGKILTWG 365
++CG+ HT A++ EG + WG
Sbjct: 244 IACGYAHTLALTDEGLLYAWG 264
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 36/254 (14%)
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
++SN + +GK + P ++ + + +F A +++ T +V +G S
Sbjct: 2 RHSNIMVDVGKWPIFTLLSPQEIASIRKACVFGTSA----NEAIYTTHNDEVFVFGLNCS 57
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDR 265
LG G S + P+ ++ L G K+ + G H E+G VY +G
Sbjct: 58 NCLGTGDSQSTI---------VPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHN 108
Query: 266 AVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ N P + L EV CG +H+ L+ G+LY WG N G +G
Sbjct: 109 GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGS 168
Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSG 381
GS +P RV + V ++CG + A ++ G++ WG+ G+
Sbjct: 169 GSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGN------------ 216
Query: 382 GQLDRG----QLTP 391
GQL G QLTP
Sbjct: 217 GQLGLGNNGNQLTP 230
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 30/339 (8%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P ++ L + V CG HT VLT G++Y WG+N G LG G+
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
P V + ++ +C HT+A G + WG
Sbjct: 298 SYPTPVTVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 148/321 (46%), Gaps = 23/321 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3190
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3191 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
H R+P ++ L + V G H +T G++Y WG N++G G G+ V P V
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Query: 335 QGPFSESPVDQVSCGWKHTAA 355
QG + +V+CG H+ A
Sbjct: 3305 QG-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4313 SAHTLAWSTSK 4323
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3063
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4239
Query: 384 LDR 386
+ R
Sbjct: 4240 VRR 4242
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4284 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4070 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4129
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4130 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4187
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4188 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4244
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4245 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4297
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4298 RPRLVAALQGKKVNRVACGSAHT 4320
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2967 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3026
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3027 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3085
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3086 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3137 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3196
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3197 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3252
Query: 386 RGQLT 390
+ Q+
Sbjct: 3253 KPQVV 3257
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3023 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3082
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3083 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3141
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3142 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3195
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3196 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3250
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3251 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3310
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3311 G-LEGQKITRVACGSSHSVA 3329
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4030 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4088
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4089 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4146
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4147 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4197
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4198 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4257
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4258 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4316
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4317 SAHTLAWSTSK 4327
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 510 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 568
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 569 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 626
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 627 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 677
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 678 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 737
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P +S KH I+ G ++ W
Sbjct: 738 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 782
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3077 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3137 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3194
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3195 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3251
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3252 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3300
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3301 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3332
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 496
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 552
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 553 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 600
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 660
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 661 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 719
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 720 VAAGSTHCLALTEDSEVHSWG 740
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3964 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4021
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4022 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4079
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4080 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4134
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4135 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4248
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4249 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4281
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3005 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3064
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3065 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3122
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3123 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3173
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3174 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3233
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3234 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 3291
Query: 370 HG 371
HG
Sbjct: 3292 HG 3293
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 525 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 583
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 584 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 642
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 643 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 700
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 701 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2959 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3016
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3070
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3071 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3130
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3131 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3186
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3959 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4017
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4018 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4077
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4078 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4128
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4129 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4189 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4243
Query: 384 LDR 386
+ R
Sbjct: 4244 VRR 4246
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 581 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 640
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 641 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 699
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 700 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 635 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 694
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 695 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 751
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 752 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 781
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4228 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4287
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4288 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4322
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q G +R +++ +S+
Sbjct: 454 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 509
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 510 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 565
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 566 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 596
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 60 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L GV + A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPLQIM 286
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 23/261 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + T + E++++G N + LG G + ++P K+E
Sbjct: 19 LSPQEIASIRKACV-FGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVP--KKLE 75
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + + T G+V +WG G +LG+G + TP
Sbjct: 76 ALCG--KKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGA---------TNQGVTP 124
Query: 230 -RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
++ L KV A G HS + +G +Y +G ++ + P +S
Sbjct: 125 VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCL 184
Query: 289 YSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ VV CG + + + GE+Y WG N NG LG+G+ +P RV + Q
Sbjct: 185 QDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRV-AALHGVCILQ 243
Query: 346 VSCGWKHTAAIS-EGKILTWG 365
++CG+ HT A++ EG + WG
Sbjct: 244 IACGYAHTLALTDEGLLYAWG 264
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 14/188 (7%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ T +V +G S LG G S + P+ ++ L G K+ + G
Sbjct: 38 NEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTI---------VPKKLEALCGKKISSLSYG 88
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + L EV CG +H+
Sbjct: 89 SGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMA 148
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKI 361
L+ G+LY WG N G +G GS +P RV + V ++CG + A ++ G++
Sbjct: 149 LSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEV 208
Query: 362 LTWGWGGS 369
WG+ G+
Sbjct: 209 YGWGYNGN 216
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LGLG+L+ + P + A + ++ CG H++ + G +++ G ND GQL
Sbjct: 144 GRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQL 203
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI+ + G P + LK QI+ GY+H+ AI +G+LY WGKN +GQLG+G +AK
Sbjct: 204 GITGSDGNISLPKEVKNLKS--TQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAK 260
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
I +PT V L A G ++A+ G++ S+G G+LG G +
Sbjct: 261 EI-LPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDG---------TT 310
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ P LI+ L KV AAGF HS
Sbjct: 311 NNSCKPLLIQGLIDKKVCQIAAGFYHS 337
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 18/261 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFGQLGISE 107
G+LG G S P A + + A+ C HT+F + +Y+ G ND+GQLG+
Sbjct: 96 GQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLG- 154
Query: 108 NIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P I L K +V I G +HS ++DGE++ +G+N +GQLG+ I
Sbjct: 155 NLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGN-IS 213
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +V+ L + Q A G+ +VA+ G++ SWG SG+LG G + S E
Sbjct: 214 LPKEVKNLK---STQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIG--------IYSAKE 261
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
P L+++LE ++ A G H+ + G+++ FG + ++ N++ +P LI
Sbjct: 262 ILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQG 321
Query: 287 LPYSE--EVVCGGYHTCVLTS 305
L + ++ G YH+ VL +
Sbjct: 322 LIDKKVCQIAAGFYHSIVLAN 342
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 26/300 (8%)
Query: 70 KHSLKALACGGA-HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQ 127
K+ +K A G H + LT G V++ G N GQLG + + P ++ L +K V
Sbjct: 64 KNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSIN-SPKQVEALSRKFVTA 122
Query: 128 ISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ Y+H+ D E+Y G+N GQLGLG K PT +E L+G G
Sbjct: 123 VGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDK--NSPTLIEALNGKRIVSIGCGQ 180
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SV + G++ S+G SG+LG I G S+ L KE++ +K A G
Sbjct: 181 YHSVVSSIDGEIFSFGRNDSGQLG------ITG-----SDGNISLPKEVKNLKSTQIACG 229
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSE--EVVCGGYHTC 301
+ H+ I+ NG++Y +G D G ++ + P+L+ L E V CG YHT
Sbjct: 230 YYHTVAIN-NGQLYSWGKN--DSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTL 286
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
L G+L+++G N +G LG G+ + P +QG + V Q++ G+ H+ ++ I
Sbjct: 287 ALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQG-LIDKKVCQIAAGFYHSIVLANPVI 345
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 152/337 (45%), Gaps = 49/337 (14%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQ-LGISENI---GYSLEPLRISGLK-------KE 124
+A G HTL LT+ G VY+ G N+ G L N + R LK K
Sbjct: 6 VAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGKN 65
Query: 125 VVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+V+I S G H A+T +G+++ +G N GQLG G + + I P +VE LS F
Sbjct: 66 IVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS--INSPKQVEALSRKFVTAV 123
Query: 183 ALGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ ++ + ++ S G G+LG LG L + +P LI+ L G ++
Sbjct: 124 GCSYYHTIFSCADEMEIYSCGRNDYGQLG-------LGNLDDKN--SPTLIEALNGKRIV 174
Query: 242 IAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
G HS +G ++ FG D + +GN P + L S ++ CG YH
Sbjct: 175 SIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGN-ISLPKEVKNLK-STQIACGYYH 232
Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ----VSCGWKHTAA 355
T V + G+LY+WG N++G LGIG ++S + + DQ V+CG HT A
Sbjct: 233 T-VAINNGQLYSWGKNDSGQLGIG----IYSAKEILPTLVRDLEDQEIVSVACGCYHTLA 287
Query: 356 ISEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTPS 392
+ G+ G +F G +S GQL G S
Sbjct: 288 L--------GYAGQLFSF---GRNSHGQLGDGTTNNS 313
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 30/261 (11%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQ-LGLGKKAAKVIPIPTK--------VECLS 175
V+Q++ G H+ +T G++Y G N G L G A VE L
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR 62
Query: 176 G--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
G I A+ G E +A+T GKV S+G G+LGHG ++SI +P+ ++
Sbjct: 63 GKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSI---------NSPKQVE 113
Query: 234 ELEGVKVKIAAAGFLHS--ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
L V + H+ +C DE +Y G ++ + P+LI L
Sbjct: 114 ALSRKFVTAVGCSYYHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKR 172
Query: 292 EVV--CGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSC 348
V CG YH+ V + GE++++G N++G LGI GS + P+ V+ S Q++C
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKST----QIAC 228
Query: 349 GWKHTAAISEGKILTWGWGGS 369
G+ HT AI+ G++ +WG S
Sbjct: 229 GYYHTVAINNGQLYSWGKNDS 249
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG D G+LG+G ++ P + E + ++ACG HTL L G +++ G N G
Sbjct: 244 WGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHG 303
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHS 135
QLG S +PL I GL K+V QI+ G++HS
Sbjct: 304 QLG-DGTTNNSCKPLLIQGLIDKKVCQIAAGFYHS 337
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G +++ G D
Sbjct: 2997 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3056
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3057 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3115
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3116 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3169
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3170 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3224
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3225 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3284
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3285 G-LEGQKITRVACGSSHSVA 3303
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4004 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4062
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4063 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4120
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4121 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4171
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4172 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4231
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4232 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4290
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4291 SAHTLAWSTSK 4301
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2941 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3000
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3001 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3059
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3060 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3111 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3170
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3171 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3226
Query: 386 RGQLT 390
+ Q+
Sbjct: 3227 KPQVV 3231
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4044 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4103
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4104 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4161
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4162 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4218
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4219 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4271
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4272 RPRLVAALQGKKINRVACGSAHT 4294
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3938 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3995
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3996 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4054 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4108
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4109 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4222
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4223 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4255
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 3015 IPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDK 3069
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3070 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 3128
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3129 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQG 3186
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G V +WG G RLGHG + + P++++ L G
Sbjct: 3187 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQVVEGLRGK 3237
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--E 292
K+ A G LH + + G+VY +GD Q+GN R+P+L+ L +
Sbjct: 3238 KIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITR 3293
Query: 293 VVCGGYHTCVLTS 305
V CG H+ T+
Sbjct: 3294 VACGSSHSVAWTT 3306
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 481 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 539
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 597
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 708
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 709 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 753
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 467
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 468 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKLISALSG 523
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 571
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++YTWG +N LG G+ + + P+ ++G + +D
Sbjct: 632 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 690
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 691 VAAGSTHCLALTEDSEVHSWG 711
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2979 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3038
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3039 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3096
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3097 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3147
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3148 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3207
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3208 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3265
Query: 370 HG 371
HG
Sbjct: 3266 HG 3267
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2933 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2990
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3042
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3043 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3102
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3103 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3160
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 496 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 555 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 613
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 671
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 672 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722
Query: 271 LFQEGNHARRPSLISK 286
+ A P L +K
Sbjct: 723 RITKPEPAALPGLDTK 738
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3933 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3991
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3992 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4051
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4052 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4102
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4103 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4163 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4217
Query: 384 LDR 386
+ R
Sbjct: 4218 VRR 4220
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4202 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4261
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4262 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4296
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A+ G + AC + NGRVY + + L Q SL S+
Sbjct: 425 LASLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQ--------SLASRNIVKIA 476
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L++ GE+++WG + G LG G L P+ + G + V ++CG
Sbjct: 477 AHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACG 536
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 537 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 567
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3352 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3411
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3412 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3469
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3470 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3526
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3527 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3579
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3580 RPRLVAALQGKKVNRVACGSAHT 3602
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2250 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2309
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2310 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2368
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 2369 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 2420 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2479
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 2480 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 2535
Query: 386 RGQLT 390
+ Q+
Sbjct: 2536 KPQVV 2540
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2306 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2366 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2424
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2425 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2478
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2479 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2533
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 2534 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2593
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 2594 G-LEGQKITRVACGSSHSVA 2612
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3312 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3370
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3371 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3428
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3429 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3479
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3480 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3539
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 3540 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 3598
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 3599 SAHTLAWSTSK 3609
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2360 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2420 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2477
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2478 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2534
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2535 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2583
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2584 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2615
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3246 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3303
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3304 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3361
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3362 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3416
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3417 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3530
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 3531 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3563
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2288 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2347
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2348 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2405
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2406 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2456
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2457 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2516
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 2517 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG-DND 2574
Query: 370 HG 371
HG
Sbjct: 2575 HG 2576
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2242 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2299
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2353
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2354 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2413
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 2414 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 2469
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3241 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3299
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3300 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3359
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3360 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3410
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3411 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 3471 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 3525
Query: 384 LDR 386
+ R
Sbjct: 3526 VRR 3528
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3510 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3569
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 3570 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 3604
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 132/292 (45%), Gaps = 25/292 (8%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITVD 141
L++T+ V+ GLN LG +N +L P ++ L K++ +S G H T D
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
G +Y WG N QLG G + PI + + + KQ A G S+A+ G+V
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPI----QVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENG 257
+WG G++G G +T++ TPR + +K + A G S + +NG
Sbjct: 150 FAWGYNNCGQVGSGS---------TTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ + P ++ L ++VCG HT LT G LY WG+N
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
G LG G+ + L SP + E V+ +C HT+A G + WG
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEITSIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
VV CG + + GE+Y WG N NG LG+G+ +P RV S V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240
Query: 349 GWKHTAAIS-EGKILTWG 365
G+ HT A++ EG + WG
Sbjct: 241 GYAHTLALTDEGLLYAWG 258
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+++ VT +V +G S LG G S L P+ ++ L G K+K + G
Sbjct: 32 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYG 82
Query: 247 F-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCV 302
H E+G VY +G ++ N P + + EV CG +H+
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMA 142
Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
L + GE++ WG N G +G GS +P +V V ++CG + A+ G++
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 362 LTWGWGGSHGTFSEDGHSSGGQLDRG----QLTP 391
WG+ G+ GQL G QLTP
Sbjct: 203 YGWGYNGN------------GQLGLGNNGNQLTP 224
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACH 322
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 323 STHTSAAKTQGGHVYMWG 340
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 67 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIASLSYGSGPHIV 117
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
Query: 368 GS 369
G+
Sbjct: 238 GN 239
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4043 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4102
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4103 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4160
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4161 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4218 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4270
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4271 RPRLVAALQGKKVNRVACGSAHT 4293
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2995 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3055 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3113
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3114 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3167
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3168 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3222
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3223 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3282
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3283 G-LEGQKITRVACGSSHSVA 3301
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2939 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2998
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2999 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3057
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3058 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3109 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3168
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3169 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3224
Query: 386 RGQLT 390
+ Q+
Sbjct: 3225 KPQVV 3229
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4003 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4061
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4062 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4119
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4120 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4170
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4171 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4230
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4231 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4289
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4290 SAHTLAWSTSK 4300
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 482 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 540
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 541 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 598
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 599 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 649
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 650 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 709
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 710 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 754
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3049 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3109 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3166
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3167 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3224 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3272
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3273 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3304
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 468
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 524
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 525 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 572
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 632
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 633 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 691
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 692 VAAGSTHCLALTEDSEVHSWG 712
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3937 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3994
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3995 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4052
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4053 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4107
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4108 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4162 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4221
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4222 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4254
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2977 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3036
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3037 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3094
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3095 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3145
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3146 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3205
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3206 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3263
Query: 370 HG 371
HG
Sbjct: 3264 HG 3265
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 497 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 555
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 556 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 614
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 615 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 672
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 673 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2931 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2988
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3042
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3043 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3102
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3103 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3158
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 122/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3932 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3990
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3991 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4050
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4051 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4101
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4102 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4162 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4216
Query: 384 LDR 386
+ R
Sbjct: 4217 VRR 4219
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 553 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 612
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 613 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 671
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 672 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 607 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 666
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 667 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 718
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4201 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4260
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4261 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4295
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+A G AC + NGRVY + + L Q G +R ++I +S+
Sbjct: 426 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQ-GLASR--NIIKIAAHSD- 481
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG
Sbjct: 482 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 537
Query: 350 WKHTAAIS-EGKILTWGWGG----SHGTFSED 376
++AAI+ EG++ TWG G HG+ SED
Sbjct: 538 STYSAAITAEGELYTWGRGNYGRLGHGS-SED 568
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G +++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH + +
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGTDVHVR 3250
Query: 386 RGQLT 390
+ Q+
Sbjct: 3251 KPQVV 3255
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L + V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ +++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4314
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4315 SAHTLAWSTSK 4325
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4187 SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 3039 IPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDK 3093
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 3152
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3153 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQG 3210
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G V +WG G RLGHG + + P++++ L G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQVVEGLRGK 3261
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--E 292
K+ A G LH + + G+VY +GD Q+GN R+P+L+ L +
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITR 3317
Query: 293 VVCGGYHTCVLTS 305
V CG H+ T+
Sbjct: 3318 VACGSSHSVAWTT 3330
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ + PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+ + + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHT 4318
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKLISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++YTWG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 145/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG G+ + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG-DND 3289
Query: 370 HG 371
HG
Sbjct: 3290 HG 3291
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
WG E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ ++ V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4187 SDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4241
Query: 384 LDR 386
+ R
Sbjct: 4242 VRR 4244
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4320
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 238 VKVKIAAAGFLHSACIDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
V++ A FL + NGRVY + + L Q SL S+
Sbjct: 455 VQIACAEKRFL---ILSRNGRVYTQAYNSDTLGPQLVQ--------SLASRNIVKIAAHS 503
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKH 352
G+H L++ GE+++WG + G LG G L P+ + G + V ++CG +
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563
Query: 353 TAAIS-EGKILTWGWGG----SHGTFSED 376
+AAI+ EG++ TWG G HG+ SED
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACH 293
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 294 STHTSAAKTQGGHVYMWG 311
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 38 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIV 88
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
Query: 368 GS 369
G+
Sbjct: 209 GN 210
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4313 SAHTLAWSTSK 4323
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3247
Query: 386 RGQLT 390
+ Q+
Sbjct: 3248 KPQVV 3252
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 156/334 (46%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3286
Query: 370 HG 371
HG
Sbjct: 3287 HG 3288
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 123/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L + +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4239
Query: 384 LDR 386
+ R
Sbjct: 4240 VRR 4242
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4284 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 30/339 (8%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P ++ L + V CG HT VLT G++Y WG+N G LG G+
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
P V + ++ +C HT+A G + WG
Sbjct: 298 SYPTPVTVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4073 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4133 LGHSDSED-QLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4190
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4191 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4247
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4248 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4300
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4301 RPRLVAALQGKKVNRVACGSAHT 4323
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4033 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4091
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4092 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4149
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4150 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4200
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4201 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4260
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ G H T GE+YTWG N+ G LG G+ + + P R+ V++V+CG
Sbjct: 4261 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4319
Query: 350 WKHTAAISEGK 360
HT A S K
Sbjct: 4320 SAHTLAWSTSK 4330
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3025 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3085 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3143
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3144 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3197
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3198 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3252
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
R+P ++ L + V G H +T G++Y WG N++G G G+ V P VQ
Sbjct: 3253 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3312
Query: 336 GPFSESPVDQVSCGWKHTAA 355
G + +V+CG H+ A
Sbjct: 3313 G-LEGQKITRVACGSSHSVA 3331
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 150/305 (49%), Gaps = 20/305 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2969 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3028
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3029 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3087
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3088 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3139 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3198
Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLD 385
+ + P+ ++ + V Q+ CG + + A+++ ++ W WG G + GH S +
Sbjct: 3199 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWG--KGDYFRLGHGSDVHVR 3254
Query: 386 RGQLT 390
+ Q+
Sbjct: 3255 KPQVV 3259
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
+WGSN+ C ++ V PE P ++ KH I+ G ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3079 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3139 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3196
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3197 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3253
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3254 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3302
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3303 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3334
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
+ +V CG + LT G++Y+WG +N LG G+ + + P+ ++G + +D
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714
Query: 346 VSCGWKHTAAISE-GKILTWG 365
V+ G H A++E ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 156/334 (46%), Gaps = 27/334 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3967 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4024
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4025 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4082
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4083 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4137
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G V A +G + C+ ++ V+ +GD K+
Sbjct: 4138 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
+ + P I L +V CG + LT G +YTWG + LG GS D + P
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4251
Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
+VQG V ++ G H +E G++ TWG
Sbjct: 4252 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4284
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 22/302 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3007 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3066
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3067 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3124
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3125 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3175
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3176 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3235
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
TWG + LG GS + P+ V+G + V+ G H A+++ G++ WG
Sbjct: 3236 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG-DND 3293
Query: 370 HG 371
HG
Sbjct: 3294 HG 3295
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2961 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3018
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3072
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3073 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3132
Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
E G LG G P+ V+ V QV+CG + A EG + +WG G
Sbjct: 3133 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWGDG 3188
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 123/303 (40%), Gaps = 73/303 (24%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3962 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4020
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4021 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4080
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4081 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4131
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
++ + +P L+ L + +V CG T LT +++WG + G LG G
Sbjct: 4132 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191
Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
D P ++ + V +V CG + + A+++ G + TWG G H GH S
Sbjct: 4192 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL----GHGSDDH 4246
Query: 384 LDR 386
+ R
Sbjct: 4247 VRR 4249
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4231 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4290
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4291 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4325
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
G+H L + GE+Y+WG + G LG G L P+ + G + V ++CG ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564
Query: 354 AAIS-EGKILTWGWGG----SHGTFSED 376
AAI+ EG++ TWG G HG+ SED
Sbjct: 565 AAITAEGELYTWGRGNYGRLGHGS-SED 591
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
+ V CG HT VLT G++Y WG+N G LG G+ P V + ++ +C
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACH 322
Query: 350 WKHTAAISE--GKILTWG 365
HT+A G + WG
Sbjct: 323 STHTSAAKTQGGHVYMWG 340
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 67 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIV 117
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 177
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
Query: 368 GS 369
G+
Sbjct: 238 GN 239
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 142/319 (44%), Gaps = 18/319 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV ++ A+A G H+L +T TG V A GLN GQ
Sbjct: 117 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQ 176
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
L S P+ + V ++ G HS A+T G + WG NS+GQLG G
Sbjct: 177 LYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGTTT 236
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V+ +G + AA S+AVT G +L+WGA +G+LG G
Sbjct: 237 PRSTPV--AVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTI------ 288
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ TP + G V A G HS + G + +G ++ +
Sbjct: 289 ---TNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSST 345
Query: 281 PSLISKLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
P + LP V V GG H+ LTS G + WG N +G LG G+ +P P
Sbjct: 346 PVAV-DLPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRSTPIATDLP 404
Query: 338 FSESPVDQVSCGWKHTAAI 356
+++ + ++ G H+ A+
Sbjct: 405 -ADTTITAIAGGSFHSLAV 422
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 145/334 (43%), Gaps = 21/334 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+ +R PV ++ A+A G H+L +T G V A G N GQ
Sbjct: 65 WGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQ 124
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ + V ++ G HS A+T G + WG N GQL G
Sbjct: 125 LGDGTTTPRS-TPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTT 183
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V+ +G A G S+A+T G VL+WGA SG+LG G
Sbjct: 184 TNSS-TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGT-------- 234
Query: 222 RSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + G IAA+ HS + G + +G ++ +G R
Sbjct: 235 -TTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQL--GDGTITNR 291
Query: 281 PSLIS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
+ ++ LP V G H+ +TS G + WG N +G LG GS +P V
Sbjct: 292 STPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDL 351
Query: 337 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
P + V V+ G H+ A+ S G +L WG+ S
Sbjct: 352 PAGTT-VTAVAGGAGHSLALTSTGTMLAWGFNTS 384
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 31/233 (13%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV---LSWGAGGSGRLGHGQESSILGFLRS 223
+P V + G+ + AA Q V G L+WG +LG G +
Sbjct: 28 VPLMVAIVLGVTSVGAAPVLAQGVPSAAAGPPGTGLAWGDNAESQLGDGT---------T 78
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T+ TP + + AAG HS + G V +G + ++ +G R +
Sbjct: 79 TNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQL--GDGTTTPRSTP 136
Query: 284 IS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
++ LP V G H+ +TS G + WG N G L G+ S V +
Sbjct: 137 VAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPA 196
Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLDRGQLTP 391
+ V V+ G H+ A+ S G +L WG +S GQL G TP
Sbjct: 197 GTTVTAVAAGNAHSLALTSAGTVLAWG------------ANSSGQLGDGTTTP 237
>gi|291411448|ref|XP_002722000.1| PREDICTED: Williams-Beuren syndrome chromosome region 16 homolog
[Oryctolagus cuniculus]
Length = 466
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 154/325 (47%), Gaps = 44/325 (13%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
LE P+ ++ + ++CG AH+L LT+ V++ G N +GQ G + E+ YS
Sbjct: 161 LEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSLGNNSYGQCGRKVVEDEVYSE 220
Query: 114 --EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ R+ +VVQ++ G HS +T GE+Y G ++GQ GLG + PTK+
Sbjct: 221 SHKVHRLQDFDGQVVQVACGQDHSLFVTDRGEVYSCGWGADGQTGLGHY--NITSTPTKL 278
Query: 172 E-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L+G+ Q A + +AV+ G V WG + + + ST PR
Sbjct: 279 GGDLAGVHVVQVATYGDCCLAVSADGGVFGWG--------NSEYRQLASVTDSTQVNVPR 330
Query: 231 LIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG-----------DRAVDKMLFQEGNHA 278
+ GV KV+ AA G A ++ GRV+++G + A+ +M+
Sbjct: 331 RLP-FSGVGKVEQAACGGTGCAVVNGEGRVFVWGYGILGKGPNLVETALPEMI------- 382
Query: 279 RRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
P+L +S EV CG H LT+ GEL+ WG N GCLGIG ++ + P R
Sbjct: 383 -PPTLFGLTEFSPEVRISQVRCGLSHFAALTNKGELFVWGKNVRGCLGIGRLEDQYFPWR 441
Query: 334 VQGPFSESPVDQVSCGWKHTAAISE 358
V P PV V+CG HT +++
Sbjct: 442 VTMP--GEPV-AVACGVDHTVTLAK 463
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 115 PLRISGLKKEVVQISTGYHHS--SAITVD-GELYMWGKNSNGQLGLGKK----------A 161
P R+ L +++ + GY + S+ T D +++ G N + QLG +
Sbjct: 102 PYRLE-LDQKISSAACGYGFTLLSSTTKDVTKVWGMGLNKDSQLGFQRSRRDQTRGYEYV 160
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+P ++ Q + G S+ +T V S G G+ G + +
Sbjct: 161 LEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSLGNNSYGQCGR---KVVEDEV 217
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S S RL ++ +G V++A G HS + + G VY G A + N P
Sbjct: 218 YSESHKVHRL-QDFDGQVVQVAC-GQDHSLFVTDRGEVYSCGWGADGQTGLGHYNITSTP 275
Query: 282 S-LISKLPYSEEVVCGGYHTCVL--TSGGELYTWGSNENGCLG-IGSIDVLHSPERVQGP 337
+ L L V Y C L ++ G ++ WG++E L + ++ P R+ P
Sbjct: 276 TKLGGDLAGVHVVQVATYGDCCLAVSADGGVFGWGNSEYRQLASVTDSTQVNVPRRL--P 333
Query: 338 FS-ESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
FS V+Q +CG A ++ EG++ WG+G
Sbjct: 334 FSGVGKVEQAACGGTGCAVVNGEGRVFVWGYG 365
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 30/339 (8%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P ++ L + V CG HT VLT G++Y WG+N G LG G+
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
P V + ++ +C HT+A G + WG
Sbjct: 298 SYPTPVTVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|344240759|gb|EGV96862.1| Williams-Beuren syndrome chromosomal region 16 protein-like
[Cricetulus griseus]
Length = 331
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 148/319 (46%), Gaps = 26/319 (8%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
LE P+ ++ + ++CG AH+L LT+ V++ G N GQ G + E+ YS
Sbjct: 26 LEPAPVPLPLDRPQETKVLQVSCGRAHSLILTDREGVFSMGNNSHGQCGRKVVEDEVYSE 85
Query: 114 EPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
R+ +VVQ+ G HS +T GE+Y G ++GQ GLG + PTK+
Sbjct: 86 SHTVHRMQDFDGQVVQVVCGQDHSLFLTNKGEVYSCGWGADGQTGLGHY--NITSTPTKL 143
Query: 172 E-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L+G+ Q A + +AV+ G V WG + + + ST PR
Sbjct: 144 AGDLAGVTVIQVATYGDCCLAVSSDGGVFGWG--------NSEYLQLASVTDSTQVNVPR 195
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK---MLFQEGNHARRPSLISKL 287
+ E KVK A G A ++E G V+++G + K +L P+L
Sbjct: 196 CLPFSEVGKVKQVACGGTGCAVLNEEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLT 255
Query: 288 PYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
++ ++ CG H LT+ GEL+ WG N GCLGIG ++ + P RV P P
Sbjct: 256 EFNPHIQVSQIRCGLSHFAALTNNGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP--GEP 313
Query: 343 VDQVSCGWKHTAAISEGKI 361
VD V+CG H +++ I
Sbjct: 314 VD-VACGVDHMVTLAKSFI 331
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F E +K +ACGG L E G V+ G +G
Sbjct: 174 WGNSEYLQLASVTDSTQVNVPRCLPFSEVGKVKQVACGGTGCAVLNEEGHVFVWG---YG 230
Query: 102 QLGISENIGYSLEPLRIS----GLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSN 152
LG N+ + P I GL + +V QI G H +A+T +GEL++WGKN
Sbjct: 231 ILGKGPNLLETALPEMIPPTLFGLTEFNPHIQVSQIRCGLSHFAALTNNGELFVWGKNIR 290
Query: 153 GQLGLGKKAAKVIP 166
G LG+G+ + P
Sbjct: 291 GCLGIGRLEDQYFP 304
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 165/367 (44%), Gaps = 32/367 (8%)
Query: 8 AMTKYYLKQDIKLG-SKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
+T L+ D+ L ++G R I+ ++ WG GRLG G + RP +
Sbjct: 291 VLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVE 350
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK- 123
+ ++ +ACG H+ ++ +G ++ G + G LG ++ Y + P R+SG +
Sbjct: 351 SLAITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWI-PKRVSGPLEG 409
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+VV ++ G HS+ T +G+L+ G G LG G + + + P +V+ LSG +
Sbjct: 410 LQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKV 467
Query: 183 ALGFEQSVAV----------TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
A G S A+ T ++ +WG G RLGH + + L P +
Sbjct: 468 ACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYL---------EPTCV 518
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KL--PY 289
+ A G+ + + +G V+ G A + L + + P L+ KL +
Sbjct: 519 AAVAEYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQ-LGNPNSDGKVPILVRGKLVGEF 577
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
EE+ CG H VLTS ELYTWG NG LG G D SP V+ + + +SCG
Sbjct: 578 VEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEA-LKDRHIKNISCG 636
Query: 350 WKHTAAI 356
T+ I
Sbjct: 637 STFTSCI 643
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 136/309 (44%), Gaps = 32/309 (10%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYHH 134
G H +T G V+ G + G+LG ++ G + +E L I+ V ++ G +H
Sbjct: 311 GDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITN----VTFVACGEYH 366
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVT 193
S A++ G+L+ WG ++G LG IP +V L G+ A G S T
Sbjct: 367 SCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHSALAT 426
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GK+ + G G G LGHG S+ P+ ++ L G K A G HSA I
Sbjct: 427 SNGKLFTIGDGRFGVLGHGDRDSVA---------YPKEVQLLSGHKAIKVACGVWHSAAI 477
Query: 254 DE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YS-EEVVCGGYHTC 301
E R++ +GD ++ P+ ++ + Y+ +V CG T
Sbjct: 478 IEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTV 537
Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 360
LT+ G ++T G G LG + D P V+G V+++SCG H A + S +
Sbjct: 538 ALTTSGHVFTMGGTAYGQLGNPNSDG-KVPILVRGKLVGEFVEEISCGANHVAVLTSRSE 596
Query: 361 ILTWGWGGS 369
+ TWG G +
Sbjct: 597 LYTWGRGAN 605
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 108/250 (43%), Gaps = 31/250 (12%)
Query: 142 GELYMWGK---NSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
G++Y+WG+ + N GLG A+ + P +E + Q G VT G
Sbjct: 263 GDVYIWGEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQG 322
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V +WG GRLGHG E F R P L++ L V A G HS + +
Sbjct: 323 EVFTWGEDSGGRLGHGFEKD---FGR------PHLVESLAITNVTFVACGEYHSCAVSSS 373
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
G ++ +GD L G P +S +VV CG +H+ + TS G+L+T
Sbjct: 374 GDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHSALATSNGKLFT 433
Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------GK 360
G G LG G D + P+ VQ S +V+CG H+AAI E +
Sbjct: 434 IGDGRFGVLGHGDRDSVAYPKEVQL-LSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKR 492
Query: 361 ILTWGWGGSH 370
+ TWG G +
Sbjct: 493 LFTWGDGDQY 502
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHAR--------RPSLISKLPYSEEVVC-------GG 297
I+ G VYI+G+ VD GN + + +++ P +VV G
Sbjct: 259 IESLGDVYIWGEVWVD------GNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGD 312
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
H ++T GE++TWG + G LG G P V+ + + V V+CG H+ A+
Sbjct: 313 RHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVES-LAITNVTFVACGEYHSCAVS 371
Query: 357 SEGKILTWGWGGSHG 371
S G + TWG G+HG
Sbjct: 372 SSGDLFTWG-DGTHG 385
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 137/281 (48%), Gaps = 23/281 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+ + + G +Y +G + ++ GN
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269
Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
+ + + + E +V C HT S G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 134/297 (45%), Gaps = 25/297 (8%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L++T+ V+ G N G LG + +EP RI L K +V +S G H
Sbjct: 29 AGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAHSVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSG---------STANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ +NG VY +G ++ + P I+ L E+VVCG HT LT G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
WG+N G LG G+ P +V E V+ +C HT+A G++ WG
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 89/206 (43%), Gaps = 28/206 (13%)
Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
Q L F Q V G G +V G SG LG G SI+ PR
Sbjct: 15 QEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSII---------EPR 65
Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
I L G + V ++ H + +G VY +G A ++ N A P +LI
Sbjct: 66 RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
+K +S V CG +H+ VLT GE+Y WG N +G +G GS P +V V
Sbjct: 126 NKKAHS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183
Query: 345 QVSCGWKHT-AAISEGKILTWGWGGS 369
++CG + A + G++ WG+ G+
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGN 209
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|344289917|ref|XP_003416687.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16
protein-like [Loxodonta africana]
Length = 472
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 151/317 (47%), Gaps = 28/317 (8%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
LE P+ ++ + ++CG AH+L LT+ V++ G N +GQ G + EN YS
Sbjct: 167 LEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDGEGVFSMGNNSYGQCGRKVVENEIYSE 226
Query: 114 --EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ R+ +VVQ++ G HS +T GE+Y G ++GQ GLG V +PTK+
Sbjct: 227 SHKVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYACGWGADGQTGLGHY--NVSSVPTKL 284
Query: 172 E-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L+G+ Q A + +AV+ G V WG + + + ST PR
Sbjct: 285 GGDLAGVNIIQVATYGDCCLAVSADGDVFGWG--------NSEYLQLASITDSTQVNVPR 336
Query: 231 LIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDK---MLFQEGNHARRPSLISK 286
+ GV KVK AA G A ++ G V+++G + K +L P+L
Sbjct: 337 CLP-FSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGL 395
Query: 287 LPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
+ E+ CG H LT+ GEL+ WG N GCLGIG ++ + P RV P
Sbjct: 396 TELNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP--GE 453
Query: 342 PVDQVSCGWKHTAAISE 358
PVD V+CG H +++
Sbjct: 454 PVD-VACGVDHMVTLAK 469
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 30/339 (8%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKKLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
+ P ++ L + V CG HT VLT G++Y WG+N G LG G+
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297
Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
P V + ++ +C HT+A G + WG
Sbjct: 298 SYPTPVTVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
T ++ G G LG LG ++ST E PR + L G K+ + G H
Sbjct: 62 TVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLNGKKIACLSYGSGPHIV 112
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
G V+ +G A ++ NH P IS +++V+ CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
++ WG N +G +G GS P RV G V ++CG A+ + G++ WG+
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 368 GS 369
G+
Sbjct: 233 GN 234
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCADDVF 357
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,757,412,743
Number of Sequences: 23463169
Number of extensions: 301281366
Number of successful extensions: 835218
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4467
Number of HSP's successfully gapped in prelim test: 1328
Number of HSP's that attempted gapping in prelim test: 713168
Number of HSP's gapped (non-prelim): 37761
length of query: 393
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 249
effective length of database: 8,980,499,031
effective search space: 2236144258719
effective search space used: 2236144258719
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)