Query 016201
Match_columns 393
No_of_seqs 245 out of 2555
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 09:36:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 2.4E-47 8.2E-52 353.2 28.9 283 23-342 15-306 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 7.8E-46 2.7E-50 342.0 31.8 286 28-350 11-302 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 6.6E-45 2.3E-49 336.4 28.9 275 32-342 11-291 (306)
4 2vpj_A Kelch-like protein 12; 100.0 9.1E-45 3.1E-49 334.6 26.9 277 30-341 12-296 (301)
5 1zgk_A Kelch-like ECH-associat 100.0 5.6E-44 1.9E-48 330.6 28.7 254 97-386 39-296 (308)
6 3ii7_A Kelch-like protein 7; p 100.0 1.5E-43 5.1E-48 327.3 31.5 253 97-386 24-281 (306)
7 4asc_A Kelch repeat and BTB do 100.0 1.2E-44 4E-49 336.2 22.7 290 31-355 3-305 (315)
8 2woz_A Kelch repeat and BTB do 100.0 8.8E-44 3E-48 330.8 25.0 289 31-354 14-314 (318)
9 2xn4_A Kelch-like protein 2; s 100.0 7.1E-43 2.4E-47 322.2 29.6 251 97-384 30-283 (302)
10 2vpj_A Kelch-like protein 12; 100.0 2.8E-42 9.6E-47 318.0 30.0 254 96-386 30-287 (301)
11 4asc_A Kelch repeat and BTB do 100.0 1.6E-42 5.5E-47 321.8 27.2 261 97-386 13-286 (315)
12 2uvk_A YJHT; unknown function, 100.0 9.2E-43 3.1E-47 329.0 25.4 306 65-387 2-352 (357)
13 2woz_A Kelch repeat and BTB do 100.0 1.3E-40 4.3E-45 309.5 25.2 257 98-384 25-294 (318)
14 2uvk_A YJHT; unknown function, 100.0 5.8E-40 2E-44 309.8 23.0 280 24-334 11-353 (357)
15 1k3i_A Galactose oxidase precu 100.0 1.9E-36 6.5E-41 308.0 16.7 330 26-376 189-548 (656)
16 2zwa_A Leucine carboxyl methyl 100.0 2.5E-35 8.5E-40 300.5 23.7 257 26-357 391-675 (695)
17 2zwa_A Leucine carboxyl methyl 100.0 1.8E-33 6.3E-38 286.8 23.8 240 108-383 378-641 (695)
18 1k3i_A Galactose oxidase precu 100.0 5.2E-33 1.8E-37 282.7 15.3 297 52-386 167-506 (656)
19 3dsm_A Uncharacterized protein 97.8 0.0023 7.8E-08 58.4 19.5 186 28-235 49-243 (328)
20 3mbr_X Glutamine cyclotransfer 97.7 0.01 3.4E-07 51.5 20.6 195 112-357 12-225 (243)
21 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.084 2.9E-06 48.6 27.2 255 27-354 48-325 (376)
22 3dsm_A Uncharacterized protein 97.4 0.027 9.4E-07 51.1 20.3 163 96-290 16-190 (328)
23 3nol_A Glutamine cyclotransfer 97.2 0.0093 3.2E-07 52.2 14.7 98 123-236 47-144 (262)
24 3mbr_X Glutamine cyclotransfer 97.2 0.011 3.9E-07 51.1 14.6 110 161-290 13-122 (243)
25 1l0q_A Surface layer protein; 97.1 0.0063 2.2E-07 56.3 13.2 179 33-251 2-187 (391)
26 2ovr_B FBW7, F-BOX/WD repeat p 97.1 0.051 1.7E-06 51.3 19.5 161 98-294 180-340 (445)
27 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.18 6.2E-06 46.3 22.4 195 98-354 64-284 (376)
28 2qc5_A Streptogramin B lactona 97.0 0.17 5.8E-06 44.3 22.7 172 32-235 30-205 (300)
29 1k8k_C P40, ARP2/3 complex 41 97.0 0.11 3.9E-06 47.1 20.3 150 32-205 19-172 (372)
30 2ovr_B FBW7, F-BOX/WD repeat p 96.9 0.065 2.2E-06 50.6 19.1 137 125-293 245-382 (445)
31 1ri6_A Putative isomerase YBHE 96.8 0.063 2.2E-06 48.1 17.4 99 98-210 61-165 (343)
32 3jrp_A Fusion protein of prote 96.8 0.04 1.4E-06 50.2 15.6 172 98-294 34-232 (379)
33 3nol_A Glutamine cyclotransfer 96.7 0.027 9.2E-07 49.3 13.2 112 159-290 33-144 (262)
34 3ow8_A WD repeat-containing pr 96.6 0.072 2.5E-06 48.0 15.8 134 128-294 133-271 (321)
35 3nok_A Glutaminyl cyclase; bet 96.6 0.09 3.1E-06 46.0 15.2 96 122-236 58-153 (268)
36 4aez_A CDC20, WD repeat-contai 96.5 0.11 3.8E-06 48.2 17.1 134 52-208 114-250 (401)
37 1p22_A F-BOX/WD-repeat protein 96.5 0.14 4.7E-06 48.2 17.6 215 32-294 142-357 (435)
38 2iwa_A Glutamine cyclotransfer 96.5 0.25 8.5E-06 43.4 17.7 99 122-236 24-124 (266)
39 3jrp_A Fusion protein of prote 96.4 0.073 2.5E-06 48.4 14.8 190 32-251 22-238 (379)
40 2z2n_A Virginiamycin B lyase; 96.4 0.44 1.5E-05 41.5 21.4 171 32-235 25-200 (299)
41 2hes_X YDR267CP; beta-propelle 96.3 0.19 6.3E-06 45.4 16.8 145 128-293 118-271 (330)
42 3hfq_A Uncharacterized protein 96.3 0.26 8.9E-06 44.5 17.5 101 97-211 63-177 (347)
43 3v7d_B Cell division control p 96.2 0.55 1.9E-05 44.2 20.1 94 177-293 278-372 (464)
44 3dwl_C Actin-related protein 2 96.2 0.049 1.7E-06 49.9 12.3 151 32-206 22-177 (377)
45 1k8k_C P40, ARP2/3 complex 41 96.2 0.086 3E-06 47.9 13.9 140 128-293 19-164 (372)
46 3fm0_A Protein CIAO1; WDR39,SG 96.1 0.056 1.9E-06 49.3 11.9 141 128-293 27-172 (345)
47 3jro_A Fusion protein of prote 96.0 0.079 2.7E-06 54.1 14.0 172 98-294 32-230 (753)
48 1rwi_B Serine/threonine-protei 96.0 0.37 1.3E-05 41.5 16.4 173 32-236 34-210 (270)
49 3bws_A Protein LP49; two-domai 95.9 0.15 5.1E-06 47.6 14.6 159 32-209 133-295 (433)
50 1r5m_A SIR4-interacting protei 95.9 0.15 5E-06 47.1 14.0 64 128-208 216-280 (425)
51 3jro_A Fusion protein of prote 95.8 0.1 3.5E-06 53.3 13.5 108 32-155 20-133 (753)
52 3bws_A Protein LP49; two-domai 95.8 0.21 7.3E-06 46.5 14.8 97 98-211 145-248 (433)
53 2iwa_A Glutamine cyclotransfer 95.7 0.44 1.5E-05 41.8 15.6 100 171-290 23-124 (266)
54 1l0q_A Surface layer protein; 95.7 0.081 2.8E-06 48.7 11.6 146 32-210 43-193 (391)
55 1got_B GT-beta; complex (GTP-b 95.7 0.55 1.9E-05 42.3 17.0 99 128-251 154-255 (340)
56 2pm9_A Protein WEB1, protein t 95.6 1.3 4.6E-05 40.5 19.6 106 129-251 178-292 (416)
57 4ery_A WD repeat-containing pr 95.6 0.36 1.2E-05 42.7 15.1 101 128-251 76-178 (312)
58 1rwi_B Serine/threonine-protei 95.6 0.94 3.2E-05 38.9 17.4 119 98-236 47-168 (270)
59 2ojh_A Uncharacterized protein 95.5 0.12 4.2E-06 44.8 11.5 145 51-214 22-170 (297)
60 3odt_A Protein DOA1; ubiquitin 95.4 0.72 2.5E-05 40.3 16.3 25 31-63 27-51 (313)
61 4ery_A WD repeat-containing pr 95.3 1.4 4.7E-05 38.8 19.0 65 128-209 118-183 (312)
62 2xbg_A YCF48-like protein; pho 95.3 0.89 3.1E-05 41.0 16.8 203 98-355 57-268 (327)
63 3vgz_A Uncharacterized protein 95.2 1.6 5.4E-05 38.9 20.1 97 98-209 70-176 (353)
64 3no2_A Uncharacterized protein 95.2 0.48 1.7E-05 41.7 14.3 234 98-392 16-269 (276)
65 3dwl_C Actin-related protein 2 95.2 0.25 8.6E-06 45.0 12.9 134 98-251 34-175 (377)
66 3ow8_A WD repeat-containing pr 95.2 0.51 1.7E-05 42.3 14.6 100 128-251 175-277 (321)
67 3v7d_B Cell division control p 95.1 2.1 7.3E-05 40.0 20.5 132 127-290 278-410 (464)
68 3nok_A Glutaminyl cyclase; bet 95.1 0.24 8.1E-06 43.4 11.6 98 170-290 56-153 (268)
69 1p22_A F-BOX/WD-repeat protein 95.1 0.43 1.5E-05 44.7 14.5 138 125-293 139-276 (435)
70 4aow_A Guanine nucleotide-bind 95.1 0.17 5.9E-06 45.1 11.3 21 33-61 51-71 (340)
71 1yfq_A Cell cycle arrest prote 95.1 1.6 5.6E-05 38.6 17.9 93 97-206 79-179 (342)
72 2pm7_B Protein transport prote 95.1 1.6 5.6E-05 38.2 17.9 23 32-62 20-42 (297)
73 3vgz_A Uncharacterized protein 95.0 1.8 6.1E-05 38.6 23.0 140 50-209 68-218 (353)
74 2xbg_A YCF48-like protein; pho 95.0 0.92 3.1E-05 40.9 15.8 161 98-289 16-180 (327)
75 2pbi_B Guanine nucleotide-bind 95.0 0.66 2.2E-05 42.2 15.0 99 128-251 165-269 (354)
76 3lrv_A PRE-mRNA-splicing facto 94.9 2 6.9E-05 38.5 17.9 66 128-208 138-203 (343)
77 3v9f_A Two-component system se 94.8 2.1 7.3E-05 43.5 19.8 100 97-213 427-531 (781)
78 4a2l_A BT_4663, two-component 94.8 1.7 5.9E-05 44.3 18.9 140 52-209 378-529 (795)
79 1gxr_A ESG1, transducin-like e 94.7 0.37 1.3E-05 42.7 12.5 183 32-251 108-294 (337)
80 3v9f_A Two-component system se 94.7 1 3.5E-05 45.9 17.0 203 52-293 428-648 (781)
81 3i2n_A WD repeat-containing pr 94.5 0.64 2.2E-05 41.6 13.6 103 128-251 128-241 (357)
82 1got_B GT-beta; complex (GTP-b 94.5 1.2 4E-05 40.1 15.3 102 128-251 108-213 (340)
83 1gxr_A ESG1, transducin-like e 94.5 0.29 1E-05 43.4 11.1 102 128-251 108-212 (337)
84 2z2n_A Virginiamycin B lyase; 94.5 2.2 7.4E-05 36.9 20.2 119 97-235 120-242 (299)
85 1r5m_A SIR4-interacting protei 94.4 0.47 1.6E-05 43.6 12.7 26 128-159 160-185 (425)
86 3vl1_A 26S proteasome regulato 94.4 0.65 2.2E-05 42.9 13.7 64 128-208 150-214 (420)
87 3ei3_B DNA damage-binding prot 94.4 1.1 3.7E-05 40.9 15.0 145 34-206 87-236 (383)
88 3scy_A Hypothetical bacterial 94.3 2.4 8.2E-05 38.2 17.1 34 33-68 13-46 (361)
89 2pm9_A Protein WEB1, protein t 94.3 2.1 7.2E-05 39.1 17.0 106 129-251 126-247 (416)
90 1sq9_A Antiviral protein SKI8; 94.2 0.87 3E-05 41.5 14.0 21 34-62 27-47 (397)
91 4g56_B MGC81050 protein; prote 93.9 0.78 2.7E-05 41.8 12.9 102 128-251 150-256 (357)
92 2hqs_A Protein TOLB; TOLB, PAL 93.9 2.1 7.2E-05 39.8 16.1 101 98-213 204-307 (415)
93 2vdu_B TRNA (guanine-N(7)-)-me 93.9 2.2 7.6E-05 39.9 16.4 63 129-209 210-274 (450)
94 3b7f_A Glycosyl hydrolase, BNR 93.8 4.1 0.00014 37.5 19.0 103 99-213 33-154 (394)
95 2z3z_A Dipeptidyl aminopeptida 93.7 4.7 0.00016 40.2 19.4 65 144-212 234-300 (706)
96 3u4y_A Uncharacterized protein 93.7 1 3.5E-05 40.0 13.2 132 32-186 9-147 (331)
97 3mkq_A Coatomer beta'-subunit; 93.7 2.3 7.9E-05 43.1 17.3 130 98-251 78-215 (814)
98 2ojh_A Uncharacterized protein 93.6 0.73 2.5E-05 39.7 11.8 104 97-214 22-127 (297)
99 1q7f_A NHL, brain tumor CG1071 93.6 3.2 0.00011 35.8 20.2 180 32-237 40-226 (286)
100 2hqs_A Protein TOLB; TOLB, PAL 93.6 0.93 3.2E-05 42.3 13.1 74 128-214 189-264 (415)
101 2qc5_A Streptogramin B lactona 93.6 3.2 0.00011 35.8 19.6 118 97-235 125-247 (300)
102 1vyh_C Platelet-activating fac 93.6 1 3.5E-05 41.8 13.4 65 128-209 203-268 (410)
103 3bg1_A Protein SEC13 homolog; 93.6 0.69 2.4E-05 41.2 11.8 69 129-212 71-143 (316)
104 3fm0_A Protein CIAO1; WDR39,SG 93.5 0.48 1.6E-05 42.9 10.7 191 32-251 27-223 (345)
105 4e54_B DNA damage-binding prot 93.3 1.5 5.3E-05 40.9 14.2 149 32-208 131-284 (435)
106 3iz6_a 40S ribosomal protein R 93.3 4.7 0.00016 36.7 19.1 179 129-357 170-365 (380)
107 1qhu_A Protein (hemopexin); be 93.1 2.2 7.6E-05 40.4 14.7 59 128-207 158-216 (460)
108 3g4e_A Regucalcin; six bladed 93.1 2.1 7.3E-05 37.6 14.1 218 32-293 24-264 (297)
109 3mmy_A MRNA export factor; mRN 93.1 2.5 8.5E-05 37.7 14.8 144 33-208 54-201 (368)
110 1nir_A Nitrite reductase; hemo 93.1 1.7 5.8E-05 42.3 14.4 24 32-63 148-171 (543)
111 2hes_X YDR267CP; beta-propelle 92.8 2.4 8.3E-05 37.8 14.2 139 128-293 69-221 (330)
112 3hfq_A Uncharacterized protein 92.8 0.55 1.9E-05 42.3 9.8 95 145-251 18-115 (347)
113 1ri6_A Putative isomerase YBHE 92.6 5 0.00017 35.3 19.4 64 129-206 141-209 (343)
114 4g56_B MGC81050 protein; prote 92.5 0.28 9.4E-06 44.9 7.5 64 130-208 195-260 (357)
115 4aez_A CDC20, WD repeat-contai 92.5 2.7 9.3E-05 38.6 14.4 137 128-293 228-371 (401)
116 1pjx_A Dfpase, DIISOPROPYLFLUO 92.4 2.9 0.0001 36.5 14.1 139 52-205 47-206 (314)
117 3k26_A Polycomb protein EED; W 92.4 5.5 0.00019 35.3 16.9 65 128-207 127-193 (366)
118 2pm7_B Protein transport prote 92.4 5.2 0.00018 34.9 16.6 64 129-207 67-133 (297)
119 3vl1_A 26S proteasome regulato 92.4 6.4 0.00022 36.0 17.6 95 178-293 258-356 (420)
120 4gqb_B Methylosome protein 50; 92.2 0.37 1.3E-05 43.9 7.9 65 129-208 182-248 (344)
121 3zwl_B Eukaryotic translation 92.2 1.7 5.8E-05 38.8 12.3 105 128-251 43-149 (369)
122 4a2l_A BT_4663, two-component 92.0 12 0.0004 38.1 21.3 100 98-214 378-488 (795)
123 4a11_B DNA excision repair pro 91.8 1.2 4.2E-05 40.5 11.1 62 129-207 156-219 (408)
124 3sfz_A APAF-1, apoptotic pepti 91.4 3.2 0.00011 44.5 15.3 135 128-294 1014-1150(1249)
125 3bg1_A Protein SEC13 homolog; 91.4 0.84 2.9E-05 40.7 9.2 104 128-251 24-134 (316)
126 3azo_A Aminopeptidase; POP fam 91.2 4.5 0.00015 39.9 15.2 199 97-330 102-332 (662)
127 3u4y_A Uncharacterized protein 91.2 3.1 0.00011 36.7 12.8 131 98-251 21-158 (331)
128 2ynn_A Coatomer subunit beta'; 91.1 7.3 0.00025 34.1 15.5 24 32-63 24-47 (304)
129 2aq5_A Coronin-1A; WD40 repeat 91.0 1.6 5.4E-05 40.2 11.0 104 128-251 93-205 (402)
130 1sq9_A Antiviral protein SKI8; 90.9 4.7 0.00016 36.5 14.1 103 126-251 23-155 (397)
131 3sfz_A APAF-1, apoptotic pepti 90.6 0.85 2.9E-05 49.1 9.8 65 128-208 1096-1160(1249)
132 3f3f_A Nucleoporin SEH1; struc 90.4 6.3 0.00022 34.4 14.2 65 129-208 71-145 (351)
133 1q7f_A NHL, brain tumor CG1071 90.2 8.3 0.00028 33.1 21.0 93 128-236 88-182 (286)
134 3g4e_A Regucalcin; six bladed 90.1 6.2 0.00021 34.5 13.7 99 97-206 35-139 (297)
135 4gga_A P55CDC, cell division c 90.1 4.7 0.00016 37.2 13.5 95 52-156 126-220 (420)
136 3c5m_A Oligogalacturonate lyas 89.9 3 0.0001 37.8 11.7 128 98-236 169-301 (396)
137 3scy_A Hypothetical bacterial 89.5 1.9 6.3E-05 39.0 9.9 100 131-235 15-116 (361)
138 3no2_A Uncharacterized protein 89.4 10 0.00035 32.9 20.1 213 33-289 5-230 (276)
139 3k26_A Polycomb protein EED; W 89.1 1.7 5.9E-05 38.8 9.3 100 129-251 85-190 (366)
140 2pbi_B Guanine nucleotide-bind 89.0 5.3 0.00018 36.0 12.7 82 197-294 176-263 (354)
141 3fvz_A Peptidyl-glycine alpha- 88.9 12 0.00041 33.2 24.9 218 52-293 70-313 (329)
142 4gqb_B Methylosome protein 50; 88.8 2.8 9.5E-05 37.9 10.5 102 128-251 138-244 (344)
143 3ju4_A Endo-N-acetylneuraminid 88.5 15 0.00052 33.9 19.7 183 107-292 270-482 (670)
144 1qhu_A Protein (hemopexin); be 88.3 9.8 0.00033 36.0 14.0 49 97-156 167-217 (460)
145 3odt_A Protein DOA1; ubiquitin 88.2 4.4 0.00015 35.1 11.2 63 128-208 154-216 (313)
146 2ymu_A WD-40 repeat protein; u 88.0 4.8 0.00016 38.8 12.3 98 128-250 396-495 (577)
147 1jmx_B Amine dehydrogenase; ox 87.7 14 0.00047 32.4 15.2 157 30-209 8-178 (349)
148 1pgu_A Actin interacting prote 87.6 20 0.0007 34.3 17.9 130 179-356 456-603 (615)
149 3pe7_A Oligogalacturonate lyas 87.1 15 0.0005 33.0 14.5 65 145-214 168-233 (388)
150 2ecf_A Dipeptidyl peptidase IV 87.1 16 0.00056 36.3 16.0 56 97-162 129-189 (741)
151 3mkq_A Coatomer beta'-subunit; 87.0 5.4 0.00018 40.3 12.5 100 128-251 66-170 (814)
152 3pe7_A Oligogalacturonate lyas 87.0 4.8 0.00017 36.4 11.1 114 97-216 168-283 (388)
153 3f3f_A Nucleoporin SEH1; struc 86.9 15 0.0005 31.9 20.8 22 129-156 124-145 (351)
154 4e54_B DNA damage-binding prot 86.8 4.2 0.00014 37.8 10.7 101 128-251 176-280 (435)
155 1vyh_C Platelet-activating fac 86.7 11 0.00037 34.7 13.5 100 128-251 119-221 (410)
156 4ggc_A P55CDC, cell division c 86.7 15 0.0005 31.7 14.3 15 52-66 46-60 (318)
157 2ynn_A Coatomer subunit beta'; 86.7 9 0.00031 33.4 12.4 101 128-251 24-126 (304)
158 3zwl_B Eukaryotic translation 86.5 7.1 0.00024 34.5 11.8 24 32-63 43-66 (369)
159 3mmy_A MRNA export factor; mRN 85.8 3.9 0.00013 36.3 9.6 63 128-208 97-162 (368)
160 1yfq_A Cell cycle arrest prote 85.6 5.2 0.00018 35.2 10.3 102 128-251 22-129 (342)
161 3i2n_A WD repeat-containing pr 85.5 7.4 0.00025 34.3 11.4 62 129-208 80-150 (357)
162 3e5z_A Putative gluconolactona 85.4 17 0.00059 31.3 17.8 149 34-209 41-206 (296)
163 3frx_A Guanine nucleotide-bind 85.3 14 0.00049 32.4 13.1 99 128-251 118-225 (319)
164 3ei3_B DNA damage-binding prot 84.9 5.8 0.0002 35.8 10.5 133 98-251 97-234 (383)
165 1pex_A Collagenase-3, MMP-13; 84.9 16 0.00054 30.4 13.9 94 123-237 28-136 (207)
166 2dg1_A DRP35, lactonase; beta 84.7 9.4 0.00032 33.6 11.6 151 32-206 55-213 (333)
167 2p4o_A Hypothetical protein; p 84.6 20 0.00068 31.3 20.2 95 96-207 52-148 (306)
168 4a11_B DNA excision repair pro 84.3 2.7 9.1E-05 38.2 7.9 70 128-211 55-136 (408)
169 2bkl_A Prolyl endopeptidase; m 84.3 27 0.00094 34.6 15.9 182 98-293 148-340 (695)
170 2vdu_B TRNA (guanine-N(7)-)-me 84.1 26 0.0009 32.4 15.0 64 196-264 329-397 (450)
171 3dm0_A Maltose-binding peripla 84.1 13 0.00043 37.0 13.3 102 128-251 483-590 (694)
172 4aow_A Guanine nucleotide-bind 84.0 21 0.00071 31.1 13.8 62 130-208 186-248 (340)
173 1kb0_A Quinohemoprotein alcoho 83.2 39 0.0013 33.6 23.0 99 122-236 71-182 (677)
174 3iuj_A Prolyl endopeptidase; h 82.7 40 0.0014 33.5 18.2 177 98-291 156-346 (693)
175 3iz6_a 40S ribosomal protein R 82.5 28 0.00095 31.4 15.5 50 197-251 180-235 (380)
176 1kb0_A Quinohemoprotein alcoho 82.1 39 0.0013 33.6 15.9 96 175-290 74-182 (677)
177 3ott_A Two-component system se 81.9 45 0.0015 33.4 17.3 163 32-232 482-648 (758)
178 2xzm_R RACK1; ribosome, transl 81.7 22 0.00076 31.4 12.9 21 32-60 38-58 (343)
179 3b7f_A Glycosyl hydrolase, BNR 81.0 33 0.0011 31.2 22.3 101 98-214 82-216 (394)
180 2ymu_A WD-40 repeat protein; u 80.9 22 0.00077 33.9 13.4 62 128-207 314-376 (577)
181 2xdw_A Prolyl endopeptidase; a 80.8 47 0.0016 33.0 16.6 182 98-293 152-357 (710)
182 2fp8_A Strictosidine synthase; 80.6 18 0.00063 31.7 11.8 82 123-212 84-180 (322)
183 4ggc_A P55CDC, cell division c 80.3 27 0.00093 29.9 14.1 85 196-293 220-306 (318)
184 1w6s_A Methanol dehydrogenase 79.7 39 0.0013 33.1 14.6 99 122-235 56-173 (599)
185 1pgu_A Actin interacting prote 79.7 32 0.0011 32.9 14.1 134 129-294 456-606 (615)
186 2ad6_A Methanol dehydrogenase 79.4 18 0.00062 35.2 12.1 100 122-236 56-168 (571)
187 2z3z_A Dipeptidyl aminopeptida 79.3 51 0.0017 32.4 16.8 58 97-162 101-163 (706)
188 2aq5_A Coronin-1A; WD40 repeat 79.2 36 0.0012 30.7 18.4 105 130-251 145-252 (402)
189 2dg1_A DRP35, lactonase; beta 78.1 13 0.00045 32.6 10.0 70 128-210 55-125 (333)
190 1erj_A Transcriptional repress 78.0 31 0.0011 31.3 12.8 24 128-157 218-241 (393)
191 3lrv_A PRE-mRNA-splicing facto 77.8 34 0.0012 30.1 12.8 177 32-234 138-329 (343)
192 2ad6_A Methanol dehydrogenase 77.8 27 0.00093 33.9 12.8 97 175-290 59-168 (571)
193 3c5m_A Oligogalacturonate lyas 77.7 27 0.00093 31.1 12.3 64 145-214 168-233 (396)
194 1kv9_A Type II quinohemoprotei 77.4 25 0.00085 35.0 12.7 98 122-235 60-169 (668)
195 1yiq_A Quinohemoprotein alcoho 76.8 27 0.00093 34.8 12.8 98 122-235 64-174 (689)
196 1nir_A Nitrite reductase; hemo 76.5 24 0.00083 34.0 12.0 91 98-209 160-260 (543)
197 1itv_A MMP9; adaptive molecula 76.2 26 0.00088 28.7 10.4 94 123-237 11-118 (195)
198 2ecf_A Dipeptidyl peptidase IV 76.0 24 0.00082 35.1 12.3 68 128-214 119-189 (741)
199 3dm0_A Maltose-binding peripla 75.7 65 0.0022 31.8 15.6 62 130-208 532-594 (694)
200 1qks_A Cytochrome CD1 nitrite 75.6 61 0.0021 31.4 15.4 176 32-234 166-359 (567)
201 1nr0_A Actin interacting prote 75.5 61 0.0021 31.4 16.5 98 98-212 262-361 (611)
202 1n7d_A LDL receptor, low-densi 75.4 51 0.0017 33.0 14.3 116 98-235 387-514 (699)
203 2xzm_R RACK1; ribosome, transl 74.9 20 0.00068 31.8 10.3 59 178-251 87-147 (343)
204 1yiq_A Quinohemoprotein alcoho 74.2 32 0.0011 34.3 12.5 95 175-289 67-174 (689)
205 4gga_A P55CDC, cell division c 74.0 12 0.0004 34.4 8.8 83 197-293 125-209 (420)
206 3a0f_A Xyloglucanase; beta-pro 73.9 79 0.0027 31.9 20.2 152 98-270 44-223 (763)
207 1kv9_A Type II quinohemoprotei 73.7 34 0.0012 34.0 12.5 95 175-289 63-169 (668)
208 3azo_A Aminopeptidase; POP fam 73.5 51 0.0018 32.1 13.8 129 98-236 162-312 (662)
209 3hxj_A Pyrrolo-quinoline quino 72.4 41 0.0014 29.1 11.7 110 99-235 80-194 (330)
210 3hxj_A Pyrrolo-quinoline quino 71.9 37 0.0013 29.4 11.3 81 128-234 70-153 (330)
211 3ott_A Two-component system se 70.8 48 0.0017 33.2 13.1 117 98-238 494-617 (758)
212 4h5i_A Guanine nucleotide-exch 70.6 59 0.002 29.1 16.4 81 145-238 157-240 (365)
213 1nr0_A Actin interacting prote 70.4 81 0.0028 30.5 18.9 27 128-160 335-361 (611)
214 2xyi_A Probable histone-bindin 69.9 7.5 0.00026 36.0 6.4 20 129-154 141-160 (430)
215 1yr2_A Prolyl oligopeptidase; 68.7 98 0.0034 30.8 15.1 178 98-293 190-384 (741)
216 1itv_A MMP9; adaptive molecula 66.8 36 0.0012 27.9 9.1 90 128-237 64-165 (195)
217 2p4o_A Hypothetical protein; p 66.7 64 0.0022 27.9 20.2 95 98-206 96-198 (306)
218 3v65_B Low-density lipoprotein 66.1 78 0.0027 28.7 18.9 196 98-354 97-305 (386)
219 2cn3_A Xyloglucanase, beta-1,4 65.4 1.2E+02 0.004 30.5 20.4 226 98-355 46-321 (737)
220 4h5i_A Guanine nucleotide-exch 65.2 76 0.0026 28.3 13.8 108 126-251 228-341 (365)
221 3o4h_A Acylamino-acid-releasin 64.4 24 0.00083 34.0 9.0 59 147-214 134-192 (582)
222 1qks_A Cytochrome CD1 nitrite 64.1 96 0.0033 30.0 13.2 93 97-208 177-277 (567)
223 3o4h_A Acylamino-acid-releasin 63.7 16 0.00056 35.2 7.6 75 127-212 159-233 (582)
224 1flg_A Protein (quinoprotein e 63.4 75 0.0026 30.9 12.3 52 175-235 65-124 (582)
225 1erj_A Transcriptional repress 61.7 29 0.001 31.4 8.6 100 128-251 134-236 (393)
226 3hrp_A Uncharacterized protein 61.3 99 0.0034 28.3 14.9 91 128-234 141-236 (409)
227 1n7d_A LDL receptor, low-densi 61.1 1.4E+02 0.0046 29.8 14.4 131 127-290 463-602 (699)
228 1su3_A Interstitial collagenas 60.9 37 0.0013 32.0 9.1 62 123-205 267-335 (450)
229 1ijq_A LDL receptor, low-densi 59.5 90 0.0031 27.3 19.6 114 98-235 11-138 (316)
230 2xyi_A Probable histone-bindin 59.4 1E+02 0.0036 28.0 14.1 64 128-206 243-309 (430)
231 1w6s_A Methanol dehydrogenase 59.2 78 0.0027 30.9 11.5 97 174-289 58-173 (599)
232 2xdw_A Prolyl endopeptidase; a 59.1 84 0.0029 31.1 12.1 86 144-237 258-355 (710)
233 1pby_B Quinohemoprotein amine 59.1 85 0.0029 26.8 11.0 67 130-210 2-69 (337)
234 3m0c_C LDL receptor, low-densi 56.8 1.7E+02 0.0059 29.6 19.2 171 128-355 435-620 (791)
235 2ghs_A AGR_C_1268P; regucalcin 56.0 62 0.0021 28.4 9.6 94 98-205 110-209 (326)
236 3v64_C Agrin; beta propeller, 54.8 1.2E+02 0.004 27.1 19.6 196 98-355 54-263 (349)
237 3gre_A Serine/threonine-protei 54.4 1.2E+02 0.0042 27.3 12.9 66 128-209 181-248 (437)
238 3qhy_B Beta-lactamase inhibito 53.3 94 0.0032 26.8 10.1 56 171-237 151-206 (282)
239 1jmx_B Amine dehydrogenase; ox 53.3 49 0.0017 28.7 8.5 67 128-210 10-78 (349)
240 3tc9_A Hypothetical hydrolase; 52.5 1.4E+02 0.0049 27.4 13.9 94 97-209 159-260 (430)
241 3frx_A Guanine nucleotide-bind 52.3 82 0.0028 27.3 9.7 62 128-207 76-139 (319)
242 1sqj_A OXG-RCBH, oligoxylogluc 52.1 2E+02 0.0069 29.0 24.8 200 98-333 38-279 (789)
243 1npe_A Nidogen, entactin; glyc 52.0 1E+02 0.0036 25.7 20.2 90 128-235 47-140 (267)
244 3e5z_A Putative gluconolactona 51.3 59 0.002 27.7 8.5 87 129-234 40-131 (296)
245 2cn3_A Xyloglucanase, beta-1,4 51.1 2E+02 0.0069 28.7 16.6 82 153-236 230-321 (737)
246 1flg_A Protein (quinoprotein e 50.3 1.8E+02 0.0063 28.1 12.8 56 223-289 63-124 (582)
247 3oyo_A Hemopexin fold protein 49.9 1E+02 0.0036 25.7 9.4 93 127-237 69-189 (225)
248 1pby_B Quinohemoprotein amine 48.7 48 0.0017 28.5 7.6 107 98-210 12-128 (337)
249 1hxn_A Hemopexin, HPX; heme, b 48.1 1.1E+02 0.0036 25.6 9.0 65 124-206 68-144 (219)
250 3fvz_A Peptidyl-glycine alpha- 47.8 1.4E+02 0.0048 25.9 20.9 110 129-251 208-320 (329)
251 1pjx_A Dfpase, DIISOPROPYLFLUO 47.3 66 0.0023 27.4 8.2 98 128-236 28-135 (314)
252 3ju4_A Endo-N-acetylneuraminid 46.4 1.8E+02 0.0063 26.9 18.4 127 154-292 269-407 (670)
253 3hrp_A Uncharacterized protein 44.9 1.8E+02 0.0062 26.4 18.0 122 97-235 152-285 (409)
254 3v65_B Low-density lipoprotein 44.5 1.8E+02 0.0061 26.2 21.6 160 96-290 137-306 (386)
255 1hxn_A Hemopexin, HPX; heme, b 44.5 1.4E+02 0.0047 24.9 13.7 58 127-206 27-90 (219)
256 2ghs_A AGR_C_1268P; regucalcin 43.4 1.1E+02 0.0036 26.8 9.0 67 128-214 60-126 (326)
257 2gop_A Trilobed protease; beta 41.5 93 0.0032 27.0 8.4 104 97-214 152-259 (347)
258 3p5b_L Low density lipoprotein 41.3 2.1E+02 0.007 26.0 20.3 199 98-354 93-307 (400)
259 2hz6_A Endoplasmic reticulum t 41.1 10 0.00034 34.6 1.7 51 174-237 5-57 (369)
260 1xfd_A DIP, dipeptidyl aminope 40.9 1.9E+02 0.0065 28.2 11.3 76 128-212 71-149 (723)
261 1npe_A Nidogen, entactin; glyc 40.8 1.6E+02 0.0054 24.5 18.7 163 96-291 57-227 (267)
262 3m0c_C LDL receptor, low-densi 40.1 3.1E+02 0.011 27.7 21.5 134 128-291 482-621 (791)
263 3oyo_A Hemopexin fold protein 38.4 1.3E+02 0.0046 25.0 8.3 60 128-205 127-197 (225)
264 1pex_A Collagenase-3, MMP-13; 37.6 1.7E+02 0.0058 24.0 12.9 90 128-237 79-183 (207)
265 3qhy_B Beta-lactamase inhibito 37.0 84 0.0029 27.2 7.0 17 121-137 34-50 (282)
266 3a0f_A Xyloglucanase; beta-pro 37.0 3.3E+02 0.011 27.2 15.2 114 98-217 156-295 (763)
267 2bkl_A Prolyl endopeptidase; m 36.5 3.1E+02 0.011 26.8 18.3 79 127-210 78-160 (695)
268 4hw6_A Hypothetical protein, I 35.3 2.7E+02 0.0091 25.6 15.1 94 97-209 162-262 (433)
269 3c7x_A Matrix metalloproteinas 35.0 1.8E+02 0.0062 23.5 8.5 62 128-208 109-177 (196)
270 2fp8_A Strictosidine synthase; 34.4 2.2E+02 0.0076 24.4 10.2 100 96-207 206-314 (322)
271 3p5b_L Low density lipoprotein 34.2 2.7E+02 0.0091 25.2 21.9 133 128-290 170-308 (400)
272 3iuj_A Prolyl endopeptidase; h 34.0 3.5E+02 0.012 26.5 15.1 81 145-235 259-344 (693)
273 3ba0_A Macrophage metalloelast 33.7 1.6E+02 0.0056 26.6 8.6 63 128-211 284-355 (365)
274 1k32_A Tricorn protease; prote 32.9 1.7E+02 0.0058 30.5 9.8 171 98-293 318-494 (1045)
275 3dr2_A Exported gluconolactona 32.5 2.3E+02 0.0079 24.0 10.2 101 98-207 108-225 (305)
276 1gen_A Gelatinase A; hydrolase 32.0 2.2E+02 0.0074 23.5 11.1 92 128-237 87-193 (218)
277 3sjl_D Methylamine dehydrogena 29.7 1E+02 0.0035 28.2 6.5 70 128-209 291-366 (386)
278 3gre_A Serine/threonine-protei 29.4 3.1E+02 0.01 24.5 17.7 24 128-157 225-248 (437)
279 1yr2_A Prolyl oligopeptidase; 28.2 3.5E+02 0.012 26.7 10.9 101 98-211 295-400 (741)
280 3lp9_A LS-24; SEED albumin, pl 26.3 71 0.0024 26.8 4.5 62 127-207 71-148 (227)
281 2mad_H Methylamine dehydrogena 25.8 1.6E+02 0.0053 26.5 7.1 70 128-208 278-352 (373)
282 1sqj_A OXG-RCBH, oligoxylogluc 25.0 5.4E+02 0.018 25.8 25.0 181 107-333 4-211 (789)
283 3vu4_A KMHSV2; beta-propeller 24.3 3.5E+02 0.012 23.5 17.5 23 178-208 206-229 (355)
284 3v64_C Agrin; beta propeller, 24.2 3.7E+02 0.013 23.6 23.7 160 97-291 95-264 (349)
285 4fj6_A Glycoside hydrolase fam 23.5 3.6E+02 0.012 25.7 9.3 160 171-353 328-502 (523)
286 1ijq_A LDL receptor, low-densi 22.1 3.8E+02 0.013 23.0 22.5 199 52-290 11-226 (316)
287 3ba0_A Macrophage metalloelast 20.9 4.6E+02 0.016 23.5 12.1 90 128-237 236-341 (365)
288 2b4w_A Hypothetical protein, c 20.5 3.7E+02 0.013 23.4 7.6 60 125-187 37-98 (315)
289 1su3_A Interstitial collagenas 20.3 2.1E+02 0.007 26.8 6.8 59 128-208 367-434 (450)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.4e-47 Score=353.24 Aligned_cols=283 Identities=17% Similarity=0.256 Sum_probs=240.3
Q ss_pred HHHHHHhhhccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCC----cch----hhHH
Q 016201 23 LGLLGAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQD----AERF 94 (393)
Q Consensus 23 ~~~~~~~~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~----~~~----~~~~ 94 (393)
+-.|+++.++++||++||. . ...++++++||+.+++|..++.++.+ |..++++++++. |.. ....
T Consensus 15 ~~~~~~~~~~~~i~v~GG~-~---~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~ 87 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGY-F---RQSLSYLEAYNPSNGTWLRLADLQVP---RSGLAGCVVGGLLYAVGGRNNSPDGNT 87 (308)
T ss_dssp ------CCCCCCEEEECCB-S---SSBCCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCEEEETTEEE
T ss_pred eCCccccCCCCEEEEEeCc-C---CCCcceEEEEcCCCCeEeECCCCCcc---cccceEEEECCEEEEECCCcCCCCCCe
Confidence 3589999999999999998 3 35778999999999999999998887 888888877655 221 1222
Q ss_pred hhcceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEE
Q 016201 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 95 ~~~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 174 (393)
...+++.||+.+++|+++++||.+|..|++++++++|||+||.+... .++++++||+.+++|+.++++|.+ |..+++
T Consensus 88 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~ 164 (308)
T 1zgk_A 88 DSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLTR--RIGVGV 164 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSSC--CBSCEE
T ss_pred ecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCcc--ccceEE
Confidence 33489999999999999999999999999999999999999987643 468899999999999999998874 888899
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeee
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 254 (393)
++++++||++||.++.. ..+++++||+.+++|+.++++|.+|..|++++++++||++||..+....+.+++|+
T Consensus 165 ~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd---- 237 (308)
T 1zgk_A 165 AVLNRLLYAVGGFDGTN---RLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYD---- 237 (308)
T ss_dssp EEETTEEEEECCBCSSC---BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEE----
T ss_pred EEECCEEEEEeCCCCCC---cCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEe----
Confidence 99999999999987653 27899999999999999999999999999999999999999998665556666666
Q ss_pred ccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCC
Q 016201 255 DGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMP 333 (393)
Q Consensus 255 d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~ 333 (393)
+.+++|+.++++|.+|..+++++++++|||+||.++.. ..+++++|| .+++|+.+++||
T Consensus 238 ---~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 238 ---VETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHT-----------------FLDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp ---TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-----------------BCCEEEEEETTTTEEEEEEECS
T ss_pred ---CCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCc-----------------ccceEEEEcCCCCEEeecCCCC
Confidence 68999999999999999999999999999999987542 357899999 668999999999
Q ss_pred CCCCCccee
Q 016201 334 KPNSHIECA 342 (393)
Q Consensus 334 ~~r~~~~~~ 342 (393)
.+|..++++
T Consensus 298 ~~r~~~~~~ 306 (308)
T 1zgk_A 298 SGRSGVGVA 306 (308)
T ss_dssp SCCBSCEEE
T ss_pred CCcccceeE
Confidence 999887553
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.8e-46 Score=341.99 Aligned_cols=286 Identities=17% Similarity=0.274 Sum_probs=238.9
Q ss_pred HhhhccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCC----cchhhHHhhcceeecc
Q 016201 28 AALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQDAERFLSATFADLP 103 (393)
Q Consensus 28 ~~~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 103 (393)
.+.+++.||++||. +. ..++.+++||+.+++|..++.++.+ |..++++++++. |.........+++.||
T Consensus 11 ~~~~~~~i~v~GG~-~~---~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d 83 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQ-AP---KAIRSVECYDFKEERWHQVAELPSR---RCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYD 83 (302)
T ss_dssp ----CEEEEEECCB-SS---SBCCCEEEEETTTTEEEEECCCSSC---CBSCEEEEETTEEEEESCBCSSSBCCCEEEEE
T ss_pred ccCCCCEEEEECCC-CC---CCCCcEEEEcCcCCcEeEcccCCcc---cccceEEEECCEEEEEeCcCCCccccceEEEC
Confidence 44578999999998 32 3567899999999999999998887 888888777555 2211122334899999
Q ss_pred CCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEE
Q 016201 104 APDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYI 183 (393)
Q Consensus 104 ~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv 183 (393)
+.+++|+.+++||.+|..|++++++++|||+||.+... .++++++||+.+++|+.++++|.+ |..+++++++++||+
T Consensus 84 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv 160 (302)
T 2xn4_A 84 PVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNTR--RSSVGVGVVGGLLYA 160 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEE
T ss_pred CCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCCc--ccCceEEEECCEEEE
Confidence 99999999999999999999999999999999987654 468999999999999999999874 888999999999999
Q ss_pred EeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCe
Q 016201 184 VSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAW 263 (393)
Q Consensus 184 ~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W 263 (393)
+||.+.... ...+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+.+++|| +.+++|
T Consensus 161 ~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd-------~~~~~W 232 (302)
T 2xn4_A 161 VGGYDVASR-QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYD-------PTTNAW 232 (302)
T ss_dssp ECCEETTTT-EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEE-------TTTTEE
T ss_pred EeCCCCCCC-ccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEe-------CCCCCE
Confidence 999876532 347889999999999999999999999999999999999999987665566666666 689999
Q ss_pred EEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECC-CCCCCCCCcce
Q 016201 264 RTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLP-PMPKPNSHIEC 341 (393)
Q Consensus 264 ~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~-~~~~~r~~~~~ 341 (393)
+.++++|.+|..++++.++++|||+||.++.. ..+++++|| .+++|+.++ .||.+|..++
T Consensus 233 ~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~- 294 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCAVNGLLYVVGGDDGSC-----------------NLASVEYYNPTTDKWTVVSSCMSTGRSYAG- 294 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEECSSCCSSCCBSCE-
T ss_pred eeCCCCCCccccCeEEEECCEEEEECCcCCCc-----------------ccccEEEEcCCCCeEEECCcccCcccccce-
Confidence 99999999999999999999999999987542 356799999 668999997 8999988764
Q ss_pred eEEEECCEE
Q 016201 342 AWVIVNNSI 350 (393)
Q Consensus 342 ~~~~~~~~i 350 (393)
+++++++|
T Consensus 295 -~~~~~~~i 302 (302)
T 2xn4_A 295 -VTVIDKRL 302 (302)
T ss_dssp -EEEEEC--
T ss_pred -EEEecccC
Confidence 46777664
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=6.6e-45 Score=336.39 Aligned_cols=275 Identities=16% Similarity=0.231 Sum_probs=236.5
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCC----cchhhHHhhcceeeccCCCC
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQDAERFLSATFADLPAPDL 107 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 107 (393)
.+.||++||. . . ++.+++||+.+++|..++.++.+ |..++++++++. |... .....+++.||+.++
T Consensus 11 ~~~l~~~GG~-~----~-~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 11 HDYRIALFGG-S----Q-PQSCRYFNPKDYSWTDIRCPFEK---RRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKD 80 (306)
T ss_dssp CCEEEEEECC-S----S-TTSEEEEETTTTEEEECCCCSCC---CBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTT
T ss_pred cceEEEEeCC-C----C-CceEEEecCCCCCEecCCCCCcc---cceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCC
Confidence 5899999998 2 1 67899999999999999998887 999998887665 2211 233448999999999
Q ss_pred CeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEece
Q 016201 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQ 187 (393)
Q Consensus 108 ~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~ 187 (393)
+|+.++++|.+|..|++++++++|||+||.+.....++++++||+.+++|+.++++|.+ |..+++++++++||++||.
T Consensus 81 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 81 SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ--RCSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCE
T ss_pred eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC--cceeEEEEECCEEEEECCC
Confidence 99999999999999999999999999999875555678999999999999999999875 8888999999999999998
Q ss_pred eCCCC-CCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEe
Q 016201 188 YGPQC-RGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE 266 (393)
Q Consensus 188 ~~~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~ 266 (393)
+.... ....+++++||+++++|++++++|.+|..|++++++++||++||.......+.+++|+ +.+++|+.+
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd-------~~~~~W~~~ 231 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYD-------IKLNEWKMV 231 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEE-------TTTTEEEEC
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEee-------CCCCcEEEC
Confidence 76432 1127899999999999999999999999999999999999999987654455555555 699999999
Q ss_pred ccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCCCCCCCccee
Q 016201 267 IPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIECA 342 (393)
Q Consensus 267 ~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~r~~~~~~ 342 (393)
+++|.+|..+++++++++|||+||.++.. ..+++++|| .+++|+.+++||.+|..+.++
T Consensus 232 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 232 SPMPWKGVTVKCAAVGSIVYVLAGFQGVG-----------------RLGHILEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp CCCSCCBSCCEEEEETTEEEEEECBCSSS-----------------BCCEEEEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred CCCCCCccceeEEEECCEEEEEeCcCCCe-----------------eeeeEEEEcCCCCeEEeCCCcccccceeEEE
Confidence 99999999999999999999999987542 356799999 668999999999999987654
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=9.1e-45 Score=334.62 Aligned_cols=277 Identities=17% Similarity=0.295 Sum_probs=238.0
Q ss_pred hhccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCC----cchhhHHhhcceeeccCC
Q 016201 30 LIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQDAERFLSATFADLPAP 105 (393)
Q Consensus 30 ~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 105 (393)
.+++.||++||..++ ...++.+++||+.+++|..++.++.+ |..++++++++. |.........+++.||+.
T Consensus 12 ~~~~~i~~~GG~~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~ 86 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQ--QSPIDVVEKYDPKTQEWSFLPSITRK---RRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYT 86 (301)
T ss_dssp -CCEEEEEECCEETT--TEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT
T ss_pred cCCCEEEEEeCccCC--CcceeEEEEEcCCCCeEEeCCCCChh---hccccEEEECCEEEEEcCCCCCccCceEEEEECC
Confidence 478999999994244 56788999999999999999998877 888888877655 211122233489999999
Q ss_pred CCC---eEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEE
Q 016201 106 DLE---WEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIY 182 (393)
Q Consensus 106 ~~~---W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iy 182 (393)
+++ |+.++++|.+|..|++++++++|||+||.++.. .++++++||+.+++|+.++++|.+ |..+++++++++||
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iy 163 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQTA--REGAGLVVASGVIY 163 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSSC--CBSCEEEEETTEEE
T ss_pred CCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCCC--cccceEEEECCEEE
Confidence 999 999999999999999999999999999988654 468999999999999999998874 88889999999999
Q ss_pred EEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCC
Q 016201 183 IVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKA 262 (393)
Q Consensus 183 v~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~ 262 (393)
++||.++.. ..+++++||+.+++|++++++|.+|..|++++++++||++||.......+.+++|+ +.+++
T Consensus 164 v~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd-------~~~~~ 233 (301)
T 2vpj_A 164 CLGGYDGLN---ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYN-------IRTDS 233 (301)
T ss_dssp EECCBCSSC---BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEE-------TTTTE
T ss_pred EECCCCCCc---ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEe-------CCCCc
Confidence 999987643 47899999999999999999999999999999999999999998665556666666 68999
Q ss_pred eEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCCCCCCCcce
Q 016201 263 WRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHIEC 341 (393)
Q Consensus 263 W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~r~~~~~ 341 (393)
|+.++++|.+|..+++++++++|||+||.++.. ..+++++|| .+++|+.+++||.+|..+++
T Consensus 234 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~ 296 (301)
T 2vpj_A 234 WTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNS-----------------LLSSIECYDPIIDSWEVVTSMGTQRCDAGV 296 (301)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BEEEEEEEETTTTEEEEEEEEEEEEESCEE
T ss_pred EEECCCCCCcccceeEEEECCEEEEEcCcCCCc-----------------ccccEEEEcCCCCeEEEcCCCCcccccceE
Confidence 999999999999999999999999999987542 356799999 66899999999999987755
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5.6e-44 Score=330.64 Aligned_cols=254 Identities=19% Similarity=0.309 Sum_probs=221.5
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCC---CCCCccceEEEEECCCCceEeCCCCCCCCCcceeE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG---SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 173 (393)
.+++.||+.+++|+.++++|.+|..|++++++++|||+||.. .....++++++||+.+++|++++++|.+ |..++
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP--RNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC--CBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC--ccccE
Confidence 489999999999999999999999999999999999999983 2334568899999999999999999874 88899
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeee
Q 016201 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAV 253 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~ 253 (393)
+++++++||++||.+... ..+++++||+.+++|+.++++|.+|..|++++++++||++||..+....+.+++|+
T Consensus 117 ~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd--- 190 (308)
T 1zgk_A 117 VGVIDGHIYAVGGSHGCI---HHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYY--- 190 (308)
T ss_dssp EEEETTEEEEECCEETTE---ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE---
T ss_pred EEEECCEEEEEcCCCCCc---ccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEe---
Confidence 999999999999987643 37889999999999999999999999999999999999999998665556666666
Q ss_pred eccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCC
Q 016201 254 KDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPM 332 (393)
Q Consensus 254 ~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~ 332 (393)
+.+++|+.++++|.+|..+++++++++|||+||.++.. ..+++++|| .+++|+.++++
T Consensus 191 ----~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 191 ----PERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQD-----------------QLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp ----TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEECCCC
T ss_pred ----CCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCC-----------------ccceEEEEeCCCCcEEECCCC
Confidence 69999999999999999999999999999999987542 357799999 67899999999
Q ss_pred CCCCCCcceeEEEECCEEEEEcCcCCCCCcccceEEEEEEEeecCCCccccccc
Q 016201 333 PKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLPSLQSR 386 (393)
Q Consensus 333 ~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~ 386 (393)
|.+|..+ ++++++++||++||....... + .+++||+++++|+.+++.
T Consensus 250 p~~r~~~--~~~~~~~~i~v~GG~~~~~~~-~----~v~~yd~~~~~W~~~~~~ 296 (308)
T 1zgk_A 250 KHRRSAL--GITVHQGRIYVLGGYDGHTFL-D----SVECYDPDTDTWSEVTRM 296 (308)
T ss_dssp SSCCBSC--EEEEETTEEEEECCBCSSCBC-C----EEEEEETTTTEEEEEEEC
T ss_pred CCCccce--EEEEECCEEEEEcCcCCCccc-c----eEEEEcCCCCEEeecCCC
Confidence 9998865 447889999999998764332 2 458999999999988654
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=327.32 Aligned_cols=253 Identities=19% Similarity=0.314 Sum_probs=221.4
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 176 (393)
.+++.||+.+++|++++++|.+|..|++++++++|||+||.+ ...++++++||+.+++|+.++++|.+ |..+++++
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~ 99 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPTP--RDSLAACA 99 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSSC--CBSCEEEE
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCcc--ccceeEEE
Confidence 489999999999999999999999999999999999999988 44578999999999999999999874 88999999
Q ss_pred eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCC----CCCcceeEee
Q 016201 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH----TPGLEHWSIA 252 (393)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~~~~~~~~ 252 (393)
++++|||+||.+... ...+++++||+.+++|++++++|.+|..|++++++++||++||...... .+.+++||
T Consensus 100 ~~~~iyv~GG~~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd-- 175 (306)
T 3ii7_A 100 AEGKIYTSGGSEVGN--SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYD-- 175 (306)
T ss_dssp ETTEEEEECCBBTTB--SCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEE--
T ss_pred ECCEEEEECCCCCCC--cEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeC--
Confidence 999999999987332 3478999999999999999999999999999999999999999875543 55566665
Q ss_pred eeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCC
Q 016201 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPP 331 (393)
Q Consensus 253 ~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~ 331 (393)
+.+++|+.++++|.+|..+++++++++|||+||.+... ..+++++|| .+++|+.+++
T Consensus 176 -----~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~ 233 (306)
T 3ii7_A 176 -----PATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLG-----------------GLDNVEYYDIKLNEWKMVSP 233 (306)
T ss_dssp -----TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTE-----------------EBCCEEEEETTTTEEEECCC
T ss_pred -----CCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCC-----------------CCceEEEeeCCCCcEEECCC
Confidence 69999999999999999999999999999999986542 367899999 6689999999
Q ss_pred CCCCCCCcceeEEEECCEEEEEcCcCCCCCcccceEEEEEEEeecCCCccccccc
Q 016201 332 MPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLPSLQSR 386 (393)
Q Consensus 332 ~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~ 386 (393)
+|.+|..+ ++++++++||++||.++.... + .+++||+++++|+.+++.
T Consensus 234 ~p~~r~~~--~~~~~~~~i~v~GG~~~~~~~-~----~~~~yd~~~~~W~~~~~~ 281 (306)
T 3ii7_A 234 MPWKGVTV--KCAAVGSIVYVLAGFQGVGRL-G----HILEYNTETDKWVANSKV 281 (306)
T ss_dssp CSCCBSCC--EEEEETTEEEEEECBCSSSBC-C----EEEEEETTTTEEEEEEEE
T ss_pred CCCCccce--eEEEECCEEEEEeCcCCCeee-e----eEEEEcCCCCeEEeCCCc
Confidence 99998875 447889999999998765443 2 458999999999998654
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=336.20 Aligned_cols=290 Identities=18% Similarity=0.272 Sum_probs=235.2
Q ss_pred hccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCC----cc------hhhHHhhccee
Q 016201 31 IADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQ------DAERFLSATFA 100 (393)
Q Consensus 31 ~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~----~~------~~~~~~~~~~~ 100 (393)
+++.||++||. .+++|||.+++|.. ++++. |..|..++++++++. |. ........+++
T Consensus 3 ~~~~l~~~GG~----------~~~~yd~~~~~W~~-~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~ 70 (315)
T 4asc_A 3 LQDLIFMISEE----------GAVAYDPAANECYC-ASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFL 70 (315)
T ss_dssp CEEEEEEEETT----------EEEEEETTTTEEEE-EECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEE
T ss_pred cceEEEEEcCC----------ceEEECCCCCeEec-CCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceE
Confidence 57899999984 78999999999986 66654 244888888777655 11 11223344699
Q ss_pred eccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCC--CCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeC
Q 016201 101 DLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGS--LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG 178 (393)
Q Consensus 101 ~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~ 178 (393)
.||+.+++|+++++||.+|..|++++++++|||+||.+. ....++++++||+.+++|++++++|.+ |..+++++++
T Consensus 71 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~ 148 (315)
T 4asc_A 71 QFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV--VYGHTVLSHM 148 (315)
T ss_dssp EEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEET
T ss_pred EecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc--ccceeEEEEC
Confidence 999999999999999999999999999999999999752 344678999999999999999999874 8899999999
Q ss_pred CEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeecccc
Q 016201 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKA 258 (393)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~ 258 (393)
++||++||.+... ...+++++||+.+++|++++++|.+|..|++++++++||++||.......+.+++|+ +
T Consensus 149 ~~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd-------~ 219 (315)
T 4asc_A 149 DLVYVIGGKGSDR--KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYS-------I 219 (315)
T ss_dssp TEEEEECCBCTTS--CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEE-------T
T ss_pred CEEEEEeCCCCCC--cccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEE-------C
Confidence 9999999985433 448999999999999999999999999999999999999999987554333444444 7
Q ss_pred ccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCCCCCC
Q 016201 259 LEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNS 337 (393)
Q Consensus 259 ~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~r~ 337 (393)
.+++|+.++++|.+|..+++++++++|||+||.+.....+ ........+++++|| .+++|+.+ ++.||.
T Consensus 220 ~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~ 289 (315)
T 4asc_A 220 TDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETES--------GELVPTELNDIWRYNEEEKKWEGV--LREIAY 289 (315)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTT--------SCEEEEEEEEEEEEETTTTEEEEE--ESCSSC
T ss_pred CCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCC--------ccccccccCcEEEecCCCChhhhh--ccCCcC
Confidence 9999999999999999999999999999999986421000 000113567899999 66899999 667777
Q ss_pred CcceeEEEECCEEEEEcC
Q 016201 338 HIECAWVIVNNSIIITGG 355 (393)
Q Consensus 338 ~~~~~~~~~~~~i~v~GG 355 (393)
.++ +++++++||++..
T Consensus 290 ~~~--~~~~~~~l~v~~~ 305 (315)
T 4asc_A 290 AAG--ATFLPVRLNVLRL 305 (315)
T ss_dssp CSS--CEEEEEEECGGGS
T ss_pred ccc--eEEeCCEEEEEEe
Confidence 654 4889999999855
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.8e-44 Score=330.77 Aligned_cols=289 Identities=17% Similarity=0.325 Sum_probs=230.9
Q ss_pred hccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCC----cc-h----h-hHHhhccee
Q 016201 31 IADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK----GQ-D----A-ERFLSATFA 100 (393)
Q Consensus 31 ~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~----~~-~----~-~~~~~~~~~ 100 (393)
+.+.||++||. .+++|||.+++|... +++.+ ..|..+++++.++. |. . . .......++
T Consensus 14 ~~~~i~~~GG~----------~~~~yd~~~~~W~~~-~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~ 81 (318)
T 2woz_A 14 VKDLILLVNDT----------AAVAYDPMENECYLT-ALAEQ-IPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFF 81 (318)
T ss_dssp EEEEEEEECSS----------EEEEEETTTTEEEEE-EECTT-SCSSEEEEECSSSCEEEEESSCC-------CCCBEEE
T ss_pred ecchhhhcccc----------ceEEECCCCCceecc-cCCcc-CCccceEEEEECCEEEEECCcccCccccCCCccccEE
Confidence 46899999997 479999999999883 44421 33777777666554 11 1 1 112333599
Q ss_pred eccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCC-CCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCC
Q 016201 101 DLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGS-LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGR 179 (393)
Q Consensus 101 ~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~ 179 (393)
.||+.+++|+++++||.+|..|++++++++|||+||... ....++++++||+.+++|+.++++|.+ |..+++++.++
T Consensus 82 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~ 159 (318)
T 2woz_A 82 QLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK--VYGHNVISHNG 159 (318)
T ss_dssp EEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC--EESCEEEEETT
T ss_pred EEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc--ccccEEEEECC
Confidence 999999999999999999999999999999999999863 344678999999999999999998874 88899999999
Q ss_pred EEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccc
Q 016201 180 YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKAL 259 (393)
Q Consensus 180 ~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~ 259 (393)
+||++||.+... ...+++++||+.+++|++++++|.+|..|++++++++|||+||.......+.+++| |+.
T Consensus 160 ~iyv~GG~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y-------d~~ 230 (318)
T 2woz_A 160 MIYCLGGKTDDK--KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAF-------DLK 230 (318)
T ss_dssp EEEEECCEESSS--CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEE-------ETT
T ss_pred EEEEEcCCCCCC--CccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEE-------ECC
Confidence 999999986543 34789999999999999999999999999999999999999998654333333333 379
Q ss_pred cCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCCCCCCC
Q 016201 260 EKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSH 338 (393)
Q Consensus 260 ~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~r~~ 338 (393)
+++|+.++++|.+|..+++++++++||++||.+...... ........+++++|| .+++|+.+ +|.+|..
T Consensus 231 ~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~ 300 (318)
T 2woz_A 231 TNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLES--------KEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYA 300 (318)
T ss_dssp TCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC------------CCBCCBCCCEEEEETTTTEEEEE--ESCCGGG
T ss_pred CCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCC--------ceeccceeeeEEEEeCCCCEehhh--ccccccc
Confidence 999999999999999999999999999999987532100 000012467899999 66899999 7888876
Q ss_pred cceeEEEECCEEEEEc
Q 016201 339 IECAWVIVNNSIIITG 354 (393)
Q Consensus 339 ~~~~~~~~~~~i~v~G 354 (393)
+++ ++++++||++.
T Consensus 301 ~~~--~~~~~~iyi~~ 314 (318)
T 2woz_A 301 SGA--SCLATRLNLFK 314 (318)
T ss_dssp TTC--EEEEEEEEGGG
T ss_pred ccc--eeeCCEEEEEE
Confidence 654 78899999973
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.1e-43 Score=322.18 Aligned_cols=251 Identities=19% Similarity=0.324 Sum_probs=218.9
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 176 (393)
.+++.||+.+++|+++++||.+|..|++++++++|||+||.++.. .++++++||+.+++|++++++|.+ |..+++++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSL-RVRTVDSYDPVKDQWTSVANMRDR--RSTLGAAV 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSS-BCCCEEEEETTTTEEEEECCCSSC--CBSCEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCc-cccceEEECCCCCceeeCCCCCcc--ccceEEEE
Confidence 479999999999999999999999999999999999999987654 468899999999999999999874 88899999
Q ss_pred eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCC--CCCCcceeEeeee
Q 016201 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENR--HTPGLEHWSIAVK 254 (393)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~~~~~~~ 254 (393)
++++||++||.++. ..++++++||+.+++|+.++++|.+|..|++++++++||++||..... ..+.+++|+
T Consensus 107 ~~~~iyv~GG~~~~---~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd---- 179 (302)
T 2xn4_A 107 LNGLLYAVGGFDGS---TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYN---- 179 (302)
T ss_dssp ETTEEEEEEEECSS---CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEE----
T ss_pred ECCEEEEEcCCCCC---ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEe----
Confidence 99999999998764 337899999999999999999999999999999999999999986542 245555555
Q ss_pred ccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCC
Q 016201 255 DGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMP 333 (393)
Q Consensus 255 d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~ 333 (393)
+.+++|+.++++|.+|..+++++++++||++||.++.. ..+++++|| .+++|+.++++|
T Consensus 180 ---~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~~ 239 (302)
T 2xn4_A 180 ---ATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL-----------------VRKSVEVYDPTTNAWRQVADMN 239 (302)
T ss_dssp ---TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS-----------------BCCCEEEEETTTTEEEEECCCS
T ss_pred ---CCCCcEEECCCCccccccccEEEECCEEEEECCCCCCc-----------------ccceEEEEeCCCCCEeeCCCCC
Confidence 69999999999999999999999999999999987542 356799999 668999999999
Q ss_pred CCCCCcceeEEEECCEEEEEcCcCCCCCcccceEEEEEEEeecCCCccccc
Q 016201 334 KPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLPSLQ 384 (393)
Q Consensus 334 ~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~y~~~~~~W~~~~ 384 (393)
.+|..+ +++.++++||++||....... + .+++||+++++|+.++
T Consensus 240 ~~r~~~--~~~~~~~~i~v~GG~~~~~~~-~----~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 240 MCRRNA--GVCAVNGLLYVVGGDDGSCNL-A----SVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SCCBSC--EEEEETTEEEEECCBCSSSBC-C----CEEEEETTTTEEEECS
T ss_pred CccccC--eEEEECCEEEEECCcCCCccc-c----cEEEEcCCCCeEEECC
Confidence 998765 457889999999998765432 2 3489999999999986
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=317.96 Aligned_cols=254 Identities=18% Similarity=0.334 Sum_probs=222.4
Q ss_pred hcceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCc---eEeCCCCCCCCCccee
Q 016201 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFDMPKDMAHSHL 172 (393)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~~~r~~~ 172 (393)
..+++.||+.+++|+.++++|.+|..|+++.++++|||+||.++.. .++++++||+.+++ |+.++++|.+ |..+
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~~~p~~--r~~~ 106 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVAPMNVR--RGLA 106 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEECCCSSC--CBSC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECCCCCCC--ccce
Confidence 3489999999999999999999999999999999999999987543 56899999999999 9999999874 8889
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEee
Q 016201 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (393)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 252 (393)
++++++++||++||.++.. ..+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+.+++|+
T Consensus 107 ~~~~~~~~lyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d-- 181 (301)
T 2vpj_A 107 GATTLGDMIYVSGGFDGSR---RHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYD-- 181 (301)
T ss_dssp EEEEETTEEEEECCBCSSC---BCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE--
T ss_pred eEEEECCEEEEEcccCCCc---ccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEe--
Confidence 9999999999999987543 37899999999999999999999999999999999999999987765566666666
Q ss_pred eeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCC
Q 016201 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPP 331 (393)
Q Consensus 253 ~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~ 331 (393)
+.+++|+.++++|.+|..+++++++++|||+||.++.. ..+++++|| .+++|+.+++
T Consensus 182 -----~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~ 239 (301)
T 2vpj_A 182 -----PHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA-----------------HLSSVEAYNIRTDSWTTVTS 239 (301)
T ss_dssp -----TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEEECC
T ss_pred -----CCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc-----------------ccceEEEEeCCCCcEEECCC
Confidence 68999999999999999999999999999999987542 256799999 6689999999
Q ss_pred CCCCCCCcceeEEEECCEEEEEcCcCCCCCcccceEEEEEEEeecCCCccccccc
Q 016201 332 MPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLPSLQSR 386 (393)
Q Consensus 332 ~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~ 386 (393)
+|.+|..+ ++++++++||++||...... ...+++||+++++|+.+++.
T Consensus 240 ~p~~r~~~--~~~~~~~~i~v~GG~~~~~~-----~~~v~~yd~~~~~W~~~~~~ 287 (301)
T 2vpj_A 240 MTTPRCYV--GATVLRGRLYAIAGYDGNSL-----LSSIECYDPIIDSWEVVTSM 287 (301)
T ss_dssp CSSCCBSC--EEEEETTEEEEECCBCSSSB-----EEEEEEEETTTTEEEEEEEE
T ss_pred CCCcccce--eEEEECCEEEEEcCcCCCcc-----cccEEEEcCCCCeEEEcCCC
Confidence 99998865 44788999999999865542 23568999999999988653
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=321.82 Aligned_cols=261 Identities=15% Similarity=0.219 Sum_probs=218.2
Q ss_pred cceeeccCCCCCeEEcCCC--CccccCccEEEECCEEEEEecC-----CCCCCccceEEEEECCCCceEeCCCCCCCCCc
Q 016201 97 ATFADLPAPDLEWEQMPSA--PVPRLDGAAIQIKNLFYVFAGY-----GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAH 169 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~--~~~r~~~~~~~~~~~iyv~GG~-----~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r 169 (393)
.+++.||+.+++|+. +++ |.+|..|++++++++|||+||. .......+++++||+.+++|+.++++|.+ |
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r 89 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP--R 89 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC--E
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc--h
Confidence 389999999999987 666 4589999999999999999996 22233456799999999999999999874 8
Q ss_pred ceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccC-CCCCCCCCcce
Q 016201 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGS-KENRHTPGLEH 248 (393)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~ 248 (393)
.++++++++++||++||.+........+++++||+.+++|++++++|.+|..|++++++++||++||. ......+.+++
T Consensus 90 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 169 (315)
T 4asc_A 90 CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCV 169 (315)
T ss_dssp ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEE
T ss_pred hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEE
Confidence 89999999999999999874322355899999999999999999999999999999999999999998 44445666666
Q ss_pred eEeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeE
Q 016201 249 WSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWK 327 (393)
Q Consensus 249 ~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~ 327 (393)
|+ +.+++|+.++++|.+|..+++++++++|||+||.+... ..+++++|| .+++|+
T Consensus 170 yd-------~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 170 YD-------PKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-----------------LTSSAEVYSITDNKWA 225 (315)
T ss_dssp EE-------TTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-----------------EEEEEEEEETTTTEEE
T ss_pred Ee-------CCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-----------------ccceEEEEECCCCeEE
Confidence 66 69999999999999999999999999999999987542 467899999 667999
Q ss_pred ECCCCCCCCCCcceeEEEECCEEEEEcCcCCC----CCcccceEEEEEEEeecCCCccccccc
Q 016201 328 VLPPMPKPNSHIECAWVIVNNSIIITGGTTEK----HPMTKRMILVGEVFQFHLDSLPSLQSR 386 (393)
Q Consensus 328 ~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~----~~~~~~~~~~~~~y~~~~~~W~~~~~~ 386 (393)
.++++|.+|..+ ++++++++||++||.... +.........+++||+++++|+.+.+.
T Consensus 226 ~~~~~p~~r~~~--~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 286 (315)
T 4asc_A 226 PFEAFPQERSSL--SLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLRE 286 (315)
T ss_dssp EECCCSSCCBSC--EEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESC
T ss_pred ECCCCCCcccce--eEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccC
Confidence 999999998875 447889999999998642 111112344679999999999998443
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=9.2e-43 Score=329.03 Aligned_cols=306 Identities=16% Similarity=0.167 Sum_probs=222.8
Q ss_pred EecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCC--CCCeEEcCCCC-ccccCccEEEECCEEEEEecC-C--
Q 016201 65 VIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAP--DLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGY-G-- 138 (393)
Q Consensus 65 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~-~-- 138 (393)
.+++||.+ |..+.++++++.-...+.....+++.||+. +++|+++++|| .+|..|++++++++|||+||. +
T Consensus 2 ~l~~lP~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 2 VLPETPVP---FKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS 78 (357)
T ss_dssp CSCCCSSC---CCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT
T ss_pred CCCCCCcc---ccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC
Confidence 45677766 887777776655222222233489999997 48999999999 899999999999999999998 2
Q ss_pred -CCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCC--------------------------
Q 016201 139 -SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQ-------------------------- 191 (393)
Q Consensus 139 -~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~-------------------------- 191 (393)
.....++++++||+.+++|+++++++ |.+|..+++++.+++|||+||.+...
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYF 157 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhc
Confidence 23346789999999999999999998 45688999899999999999975421
Q ss_pred -----CCCCCCeeEEEeCCCCCeEeCCCCCCCCCC-ceEEEECCEEEEEccCCCCC-CCCCcceeEeeeeccccccCCeE
Q 016201 192 -----CRGPTSRTFVLDSETRKWDSIPPLPSPRYS-PATQLWRGRLHVMGGSKENR-HTPGLEHWSIAVKDGKALEKAWR 264 (393)
Q Consensus 192 -----~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~~~~~d~~~~~~~W~ 264 (393)
....++++++||+.+++|+.++++|.+|.. |++++++++|||+||..... ..+ ++.+|++||.+++|+
T Consensus 158 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~-----~v~~~d~d~~~~~W~ 232 (357)
T 2uvk_A 158 DKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTD-----AVFELDFTGNNLKWN 232 (357)
T ss_dssp SSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECC-----CEEEEECC---CEEE
T ss_pred cccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccC-----ceEEEEecCCCCcEE
Confidence 001368999999999999999999987555 99999999999999975432 122 233455668999999
Q ss_pred EeccCC--CCCCceeEEEECCEEEEEcCCCCCCCCCC--CCCccccccccceecCceEEeC-CCCCeEECCCCCCCCCCc
Q 016201 265 TEIPIP--RGGPHRACFVFNDRLFVVGGQEGDFMAKP--GSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKPNSHI 339 (393)
Q Consensus 265 ~~~~~p--~~~~~~~~~~~~~~iyv~GG~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~r~~~ 339 (393)
.++++| +.+..+++++++++|||+||.+.....+. .+..+. ......+.++++|| .+++|+.++++|.+|..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 310 (357)
T 2uvk_A 233 KLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYA--HEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG 310 (357)
T ss_dssp ECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSST--TTTCCCEECCEEEECC---CEEEEECSSCCBSS
T ss_pred ecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceec--cccccceeeEEEEecCCCceeeCCCCCCCcccc
Confidence 998875 44566779999999999999753210000 000000 00001245689999 667999999999999875
Q ss_pred ceeEEEECCEEEEEcCcCCCCCcccceEEEEEEEeecCCCcccccccc
Q 016201 340 ECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFHLDSLPSLQSRF 387 (393)
Q Consensus 340 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~~ 387 (393)
+++.++++|||+||.+..+...+ .++++++++++|..+.++.
T Consensus 311 --~~~~~~~~i~v~GG~~~~~~~~~----~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 311 --VSLPWNNSLLIIGGETAGGKAVT----DSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp --EEEEETTEEEEEEEECGGGCEEE----EEEEEEC-CCSCEEEC---
T ss_pred --eeEEeCCEEEEEeeeCCCCCEee----eEEEEEEcCcEeEeeeccc
Confidence 44789999999999877665433 4588999999999887754
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-40 Score=309.48 Aligned_cols=257 Identities=17% Similarity=0.262 Sum_probs=211.0
Q ss_pred ceeeccCCCCCeEEcCCC--CccccCccEEEECCEEEEEecCCCC-----CCccceEEEEECCCCceEeCCCCCCCCCcc
Q 016201 98 TFADLPAPDLEWEQMPSA--PVPRLDGAAIQIKNLFYVFAGYGSL-----DYVHSHVDVYNFTDNKWVDRFDMPKDMAHS 170 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~--~~~r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~ 170 (393)
.++.||+.+++|... ++ |.+|..|+++.++++|||+||.... ....+++++||+.+++|++++++|.+ |.
T Consensus 25 ~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~ 101 (318)
T 2woz_A 25 AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA--RC 101 (318)
T ss_dssp EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC--BC
T ss_pred ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc--cc
Confidence 479999999999884 44 3689999999999999999996321 12334699999999999999999874 88
Q ss_pred eeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCC-CCCCCCccee
Q 016201 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKE-NRHTPGLEHW 249 (393)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~ 249 (393)
.+++++++++|||+||...... ...+++++||+.+++|++++++|.+|..|++++++++||++||... ....+.+++|
T Consensus 102 ~~~~~~~~~~iyv~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 102 LFGLGEVDDKIYVVAGKDLQTE-ASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp SCEEEEETTEEEEEEEEBTTTC-CEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEE
T ss_pred ccceEEECCEEEEEcCccCCCC-cccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEE
Confidence 9999999999999999874221 4478999999999999999999999999999999999999999743 3345566666
Q ss_pred EeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEE
Q 016201 250 SIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKV 328 (393)
Q Consensus 250 ~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~ 328 (393)
| +.+++|+.++++|.+|..+++++++++|||+||.+.. ...+++++|| .+++|+.
T Consensus 181 d-------~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-----------------~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 181 N-------PKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTED-----------------GLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp E-------TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETT-----------------EEEEEEEEEETTTCCEEE
T ss_pred c-------CCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCC-----------------CccceEEEEECCCCeEEE
Confidence 6 6899999999999999999999999999999998653 2467899999 6789999
Q ss_pred CCCCCCCCCCcceeEEEECCEEEEEcCcCCCCCcc----cceEEEEEEEeecCCCccccc
Q 016201 329 LPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMT----KRMILVGEVFQFHLDSLPSLQ 384 (393)
Q Consensus 329 ~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~----~~~~~~~~~y~~~~~~W~~~~ 384 (393)
++++|.+|..+ ++++++++||++||........ ......+++||+++++|+.+.
T Consensus 237 ~~~~p~~r~~~--~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 294 (318)
T 2woz_A 237 MTEFPQERSSI--SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGML 294 (318)
T ss_dssp CCCCSSCCBSC--EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEE
T ss_pred CCCCCCcccce--EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhhc
Confidence 99999998865 4588999999999986532100 011224589999999999883
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=5.8e-40 Score=309.85 Aligned_cols=280 Identities=15% Similarity=0.205 Sum_probs=214.4
Q ss_pred HHHHHhhhccEEEEecCCCCCCCCcccceeeeeecC--CCceEEecCCC-CCccccccceeEEecCC----cch-h----
Q 016201 24 GLLGAALIADFMWASSSSSFSSSSAHLSVASNWALE--KSGVVVIPHVN-ATKIDRQRESVAVIDKK----GQD-A---- 91 (393)
Q Consensus 24 ~~~~~~~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~--~~~W~~~~~~~-~~~~~r~~~~~~~~~~~----~~~-~---- 91 (393)
..|++++++++||++||. .+ +++++||+. +++|..+++|+ .+ |..++++++++. |.. .
T Consensus 11 ~~~~~~~~~~~iyv~GG~-~~------~~~~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~~~~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 11 KSGTGAIDNDTVYIGLGS-AG------TAWYKLDTQAKDKKWTALAAFPGGP---RDQATSAFIDGNLYVFGGIGKNSEG 80 (357)
T ss_dssp CSCEEEEETTEEEEECGG-GT------TCEEEEETTSSSCCEEECCCCTTCC---CBSCEEEEETTEEEEECCEEECTTS
T ss_pred cceEEEEECCEEEEEeCc-CC------CeEEEEccccCCCCeeECCCCCCCc---CccceEEEECCEEEEEcCCCCCCCc
Confidence 346777889999999998 32 278999997 59999999998 66 999988888665 211 1
Q ss_pred hHHhhcceeeccCCCCCeEEcCCCC-ccccCccEEEECCEEEEEecCCCCC-----------------------------
Q 016201 92 ERFLSATFADLPAPDLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGYGSLD----------------------------- 141 (393)
Q Consensus 92 ~~~~~~~~~~~~~~~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~~----------------------------- 141 (393)
......++++||+.+++|+++++|+ .+|..|++++++++|||+||.+...
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 1223348999999999999999998 8999999999999999999986432
Q ss_pred ----CccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeC--CCCCeEeCCCC
Q 016201 142 ----YVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDSIPPL 215 (393)
Q Consensus 142 ----~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~ 215 (393)
..++++++||+.+++|+.++++|.+ .+.++++++++++|||+||.+... ...+++++||+ ++++|+.++++
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-~~~~~~~~~~~~~iyv~GG~~~~~--~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWY-GTAGAAVVNKGDKTWLINGEAKPG--LRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSC-CCBSCEEEEETTEEEEECCEEETT--EECCCEEEEECC---CEEEECCCS
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCC-CcccccEEEECCEEEEEeeecCCC--cccCceEEEEecCCCCcEEecCCC
Confidence 2357999999999999999999875 355689999999999999987543 23788999976 99999999988
Q ss_pred CCC--CCCceEEEECCEEEEEccCCCCC------------CCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE
Q 016201 216 PSP--RYSPATQLWRGRLHVMGGSKENR------------HTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF 281 (393)
Q Consensus 216 p~~--r~~~~~~~~~~~iyv~GG~~~~~------------~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~ 281 (393)
|.+ |..|++++++++|||+||..... ........++.+|| +.+++|+.++++|.+|..++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd--~~~~~W~~~~~~p~~r~~~~~~~~ 315 (357)
T 2uvk_A 238 SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL--WHNGKWDKSGELSQGRAYGVSLPW 315 (357)
T ss_dssp STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEE--CC---CEEEEECSSCCBSSEEEEE
T ss_pred CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEe--cCCCceeeCCCCCCCcccceeEEe
Confidence 766 55778999999999999964321 01111122333333 789999999999999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCCC
Q 016201 282 NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPK 334 (393)
Q Consensus 282 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~ 334 (393)
+++|||+||.+... ..+++++.|+ ..++|....+.|.
T Consensus 316 ~~~i~v~GG~~~~~----------------~~~~~v~~l~~~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 316 NNSLLIIGGETAGG----------------KAVTDSVLITVKDNKVTVQNLEHH 353 (357)
T ss_dssp TTEEEEEEEECGGG----------------CEEEEEEEEEC-CCSCEEEC----
T ss_pred CCEEEEEeeeCCCC----------------CEeeeEEEEEEcCcEeEeeecccc
Confidence 99999999987542 1367899999 7889999877664
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.9e-36 Score=308.01 Aligned_cols=330 Identities=12% Similarity=0.090 Sum_probs=231.5
Q ss_pred HHHhhh--ccEEEEecCCCCCC---CCcccceeeeeecCCCceEEecCCCCCccccccce--eEEec-CCcchhhHHhhc
Q 016201 26 LGAALI--ADFMWASSSSSFSS---SSAHLSVASNWALEKSGVVVIPHVNATKIDRQRES--VAVID-KKGQDAERFLSA 97 (393)
Q Consensus 26 ~~~~~~--~~~ly~~GG~~~g~---~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~--~~~~~-~~~~~~~~~~~~ 97 (393)
+.++++ +++||++||..... ....++.+++||+.+++|..++.|+.+ |..++ ++++. +.-...+.....
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~---~~~~~~~~~~~~~g~lyv~GG~~~~ 265 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK---HDMFCPGISMDGNGQIVVTGGNDAK 265 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS---CCCSSCEEEECTTSCEEEECSSSTT
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC---CCCccccccCCCCCCEEEeCCCCCC
Confidence 455555 99999999973210 012345799999999999999988776 55443 44433 331111111122
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCC-----CCCCCCCcce
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF-----DMPKDMAHSH 171 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-----~~~~~~~r~~ 171 (393)
+++.||+.+++|+++++|+.+|..|+++++ +++|||+||.......++++|+||+.+++|+.++ +|+. .+.
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~--~~~- 342 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT--ADK- 342 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCC--CCT-
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccc--ccc-
Confidence 799999999999999999999999999999 9999999995444445789999999999999974 4443 233
Q ss_pred eEEEEeCCEEEEEeceeCCC-CCCCCCeeEEEeCCCCCeEeCC-CCCC------CCCCceEEE---ECCEEEEEccCCCC
Q 016201 172 LGVVSDGRYIYIVSGQYGPQ-CRGPTSRTFVLDSETRKWDSIP-PLPS------PRYSPATQL---WRGRLHVMGGSKEN 240 (393)
Q Consensus 172 ~~~~~~~~~iyv~GG~~~~~-~~~~~~~v~~yd~~~~~W~~~~-~~p~------~r~~~~~~~---~~~~iyv~GG~~~~ 240 (393)
++++..++++|++||.++.. ...+.+++++||+++++|.... ..+. ++..++++. .+++||++||....
T Consensus 343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 35556899999999986532 1134688999999999987533 2221 233444443 48999999997532
Q ss_pred CC-CCCcceeEeeeeccccccCCeEEec--cCCCCCCceeEEEE-CCEEEEEcCCCCCCCCCCCCCccccccccceecCc
Q 016201 241 RH-TPGLEHWSIAVKDGKALEKAWRTEI--PIPRGGPHRACFVF-NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGD 316 (393)
Q Consensus 241 ~~-~~~~~~~~~~~~d~~~~~~~W~~~~--~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
.. .....+..+.+| ||.+++|+.+. +||.+|..++++++ +++|||+||.+..... .......+
T Consensus 423 ~~~~~~~~~~~v~~y--d~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~-----------~~~~~~~~ 489 (656)
T 1k3i_A 423 QDSDATTNAHIITLG--EPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF-----------EDSTPVFT 489 (656)
T ss_dssp SSSBCCCCEEEEECC--STTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT-----------CCCSBCCC
T ss_pred CCCCcCCcceEEEcC--CCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc-----------CCCCcccc
Confidence 11 111122234443 48999999986 89999988888888 9999999997632100 01124677
Q ss_pred eEEeC-CCCCeEECCCCCCCCCCcceeEEEECCEEEEEcCcCCCCCcccceEEEEEEEeec
Q 016201 317 VYMLD-DEMKWKVLPPMPKPNSHIECAWVIVNNSIIITGGTTEKHPMTKRMILVGEVFQFH 376 (393)
Q Consensus 317 v~~yd-~~~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~y~~~ 376 (393)
+++|| .+++|+.+++++.+|..|++++...+++||++||..+....... ..+|+|.|.
T Consensus 490 v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~~~~--~~~e~~~Pp 548 (656)
T 1k3i_A 490 PEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNH--FDAQIFTPN 548 (656)
T ss_dssp CEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSCCC--CEEEEEECG
T ss_pred eEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCCCCCCCCCe--eEEEEEeCh
Confidence 99999 66899999999999998876444459999999996543321222 255888875
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.5e-35 Score=300.52 Aligned_cols=257 Identities=11% Similarity=0.107 Sum_probs=199.3
Q ss_pred HHHhhhccEEEEecCCCCCCCCcccceeeeeecCCCceEEec-CCCCCccccccceeEEecCCcchhhHHhhcceeeccC
Q 016201 26 LGAALIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIP-HVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPA 104 (393)
Q Consensus 26 ~~~~~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (393)
+.+++++++||++||. .+ ..++++++||+.+++|..++ +++.
T Consensus 391 g~~~~~~~~iyv~GG~-~~---~~~~~v~~yd~~~~~W~~~~~~~p~--------------------------------- 433 (695)
T 2zwa_A 391 GDVDVAGNDVFYMGGS-NP---YRVNEILQLSIHYDKIDMKNIEVSS--------------------------------- 433 (695)
T ss_dssp CEEEECSSCEEEECCB-SS---SBCCCEEEEEECSSCEEEEECCCCC---------------------------------
T ss_pred eEEEEECCEEEEECCC-CC---CCcCcEEEEECCCCeEEEeccCCCC---------------------------------
Confidence 3455589999999998 22 45567777777777777766 4321
Q ss_pred CCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEE
Q 016201 105 PDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYI 181 (393)
Q Consensus 105 ~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~i 181 (393)
..||.+|..|+++++ +++|||+||.+.....++++|+||+.+++|+.++++|.+ |..|+++++ +++|
T Consensus 434 --------~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~--R~~h~~~~~~~~~i 503 (695)
T 2zwa_A 434 --------SEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT--RFRHSACSLPDGNV 503 (695)
T ss_dssp --------SCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC--CBSCEEEECTTSCE
T ss_pred --------CCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC--cccceEEEEcCCEE
Confidence 247899999999999 999999999987665678999999999999999999874 888888886 9999
Q ss_pred EEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC---CCCCCCCceEEEEC---CEEEEEccCCCC--CCCCCcceeEeee
Q 016201 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP---LPSPRYSPATQLWR---GRLHVMGGSKEN--RHTPGLEHWSIAV 253 (393)
Q Consensus 182 yv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~---~~iyv~GG~~~~--~~~~~~~~~~~~~ 253 (393)
||+||.+... ++++||+.+++|+.+++ +|.+|..|++++++ ++|||+||.... ...+.+++|+
T Consensus 504 yv~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd--- 574 (695)
T 2zwa_A 504 LILGGVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFK--- 574 (695)
T ss_dssp EEECCBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEE---
T ss_pred EEECCCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEE---
Confidence 9999986532 89999999999999987 89999999988887 899999998543 3445555565
Q ss_pred eccccccCC------eEEeccC-CCCCCceeEEEEC-CEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCC
Q 016201 254 KDGKALEKA------WRTEIPI-PRGGPHRACFVFN-DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM 324 (393)
Q Consensus 254 ~d~~~~~~~------W~~~~~~-p~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~ 324 (393)
+.+++ |+.+.++ +.+|.++++++++ ++|||+||.+..... ...+++++|| .++
T Consensus 575 ----~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~--------------~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 575 ----YDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLF--------------DRTNSIISLDPLSE 636 (695)
T ss_dssp ----ECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCC--------------CTTTSEEEEETTTT
T ss_pred ----ccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCC--------------CCCCeEEEEECCCC
Confidence 58888 8988775 4778888999999 999999998654210 1357799999 668
Q ss_pred CeEECCCCCCCC------CCcceeEEEECC-EEEEEcCcC
Q 016201 325 KWKVLPPMPKPN------SHIECAWVIVNN-SIIITGGTT 357 (393)
Q Consensus 325 ~W~~~~~~~~~r------~~~~~~~~~~~~-~i~v~GG~~ 357 (393)
+|+.+. +|.+. ...+++++.+++ +|||+||..
T Consensus 637 ~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 637 TLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EEEECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred eEEEee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 999653 32110 122344455554 999999964
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.8e-33 Score=286.75 Aligned_cols=240 Identities=15% Similarity=0.198 Sum_probs=191.6
Q ss_pred CeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCC-CCC---CCCCcceeEEEEe--CCEE
Q 016201 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF-DMP---KDMAHSHLGVVSD--GRYI 181 (393)
Q Consensus 108 ~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~~---~~~~r~~~~~~~~--~~~i 181 (393)
+|...+..|.+|.++ +++++++|||+||... ..++++++||+.+++|+.++ ++| .|.+|.+|+++++ +++|
T Consensus 378 ~~~~~~~~p~rr~g~-~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKFGD-VDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBSCE-EEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCceeE-EEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 355555556556554 4558999999999876 45789999999999999998 643 3346899999999 9999
Q ss_pred EEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEeeeecccccc
Q 016201 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALE 260 (393)
Q Consensus 182 yv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~ 260 (393)
||+||.+... ..++++++||+.+++|+.++++|.+|..|+++++ +++|||+||..... .+++|| +.+
T Consensus 455 yv~GG~~~~~--~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd-------~~t 522 (695)
T 2zwa_A 455 LLIGGRKAPH--QGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYN-------VTE 522 (695)
T ss_dssp EEECCBSSTT--CBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEE-------TTT
T ss_pred EEEcCCCCCC--CccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEE-------CCC
Confidence 9999987644 2488999999999999999999999999999997 99999999987543 444444 799
Q ss_pred CCeEEecc---CCCCCCceeEEEEC---CEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCCC------eE
Q 016201 261 KAWRTEIP---IPRGGPHRACFVFN---DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMK------WK 327 (393)
Q Consensus 261 ~~W~~~~~---~p~~~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~------W~ 327 (393)
++|+.+++ +|.+|..+++++++ ++|||+||..... ...++++++|| .+++ |+
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~---------------~~~~~~v~~yd~~~~~w~~~~~W~ 587 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ---------------TTVSDKAIIFKYDAENATEPITVI 587 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS---------------SCBCCEEEEEEECTTCSSCCEEEE
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC---------------CeeeCcEEEEEccCCccccceEEE
Confidence 99999986 88889988888877 9999999986432 12467899999 6678 89
Q ss_pred ECCCC-CCCCCCcceeEEEEC-CEEEEEcCcCCCCC--cccceEEEEEEEeecCCCcccc
Q 016201 328 VLPPM-PKPNSHIECAWVIVN-NSIIITGGTTEKHP--MTKRMILVGEVFQFHLDSLPSL 383 (393)
Q Consensus 328 ~~~~~-~~~r~~~~~~~~~~~-~~i~v~GG~~~~~~--~~~~~~~~~~~y~~~~~~W~~~ 383 (393)
.+.++ +.+|..+ ++++++ ++|||+||...... ..+ .+++||+++++|+.+
T Consensus 588 ~~~~~p~~~R~~~--~~~~~~~~~iyv~GG~~~~~~~~~~~----~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 588 KKLQHPLFQRYGS--QIKYITPRKLLIVGGTSPSGLFDRTN----SIISLDPLSETLTSI 641 (695)
T ss_dssp EEEECGGGCCBSC--EEEEEETTEEEEECCBCSSCCCCTTT----SEEEEETTTTEEEEC
T ss_pred EcCCCCCCCcccc--eEEEeCCCEEEEECCccCCCCCCCCC----eEEEEECCCCeEEEe
Confidence 88776 4777765 446777 99999999865542 233 348999999999854
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=5.2e-33 Score=282.73 Aligned_cols=297 Identities=9% Similarity=0.055 Sum_probs=209.2
Q ss_pred eeeeeecCCCceEEecCCCCCccccccceeEEe--cCC----c-chhh-----HHhhcceeeccCCCCCeEEcCCCCccc
Q 016201 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVI--DKK----G-QDAE-----RFLSATFADLPAPDLEWEQMPSAPVPR 119 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~--~~~----~-~~~~-----~~~~~~~~~~~~~~~~W~~~~~~~~~r 119 (393)
.++.|||.+++|..+++++. ..++++++ ++. | .... ......++.||+.+++|+.++.||.+|
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~-----~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~ 241 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPI-----VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH 241 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSS-----CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC
T ss_pred ccccCCCCCCeeeeeccCCC-----CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC
Confidence 36789999999999988764 33444444 222 1 1100 011226899999999999999999888
Q ss_pred cCcc--EEE-ECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEeceeCCCCCCC
Q 016201 120 LDGA--AIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGP 195 (393)
Q Consensus 120 ~~~~--~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 195 (393)
..++ +++ .+++|||+||.... ++++||+.+++|+++++|+.+ |..++++++ +++|||+||..... ..
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~--R~~~s~~~~~dg~iyv~GG~~~~~--~~ 312 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQVA--RGYQSSATMSDGRVFTIGGSWSGG--VF 312 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSSC--CSSCEEEECTTSCEEEECCCCCSS--SC
T ss_pred CCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCcc--ccccceEEecCCeEEEEeCcccCC--cc
Confidence 7765 333 58999999997643 699999999999999999874 888888888 99999999953322 24
Q ss_pred CCeeEEEeCCCCCeEeC-----CCCCCCCCCceEEEECCEEEEEccCCCCC----CCCCcceeEeeeeccccccCCeEEe
Q 016201 196 TSRTFVLDSETRKWDSI-----PPLPSPRYSPATQLWRGRLHVMGGSKENR----HTPGLEHWSIAVKDGKALEKAWRTE 266 (393)
Q Consensus 196 ~~~v~~yd~~~~~W~~~-----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~~~~~~~d~~~~~~~W~~~ 266 (393)
.+++++||+.+++|+.+ .+|+..|.. +++..++++|++||.++.. ....++.|+ +.+++|...
T Consensus 313 ~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd-------~~~~~w~~~ 384 (656)
T 1k3i_A 313 EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY-------TSGSGDVKS 384 (656)
T ss_dssp CCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEE-------CSTTCEEEE
T ss_pred cccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeee-------cCCcceeec
Confidence 78899999999999997 456655543 5666799999999986532 133344444 788898765
Q ss_pred ccCCC-------CCCceeEEE---ECCEEEEEcCCCCCCCCCCCCCccccccccceecC---ceEEeC-CCCCeEECC--
Q 016201 267 IPIPR-------GGPHRACFV---FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYG---DVYMLD-DEMKWKVLP-- 330 (393)
Q Consensus 267 ~~~p~-------~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~yd-~~~~W~~~~-- 330 (393)
...+. .+..++++. .+++||++||....... ..++ ++++|| .+++|+.+.
T Consensus 385 ~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~--------------~~~~~~~~v~~yd~~~~~W~~~~~~ 450 (656)
T 1k3i_A 385 AGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS--------------DATTNAHIITLGEPGTSPNTVFASN 450 (656)
T ss_dssp EEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS--------------BCCCCEEEEECCSTTSCCEEEECTT
T ss_pred CCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC--------------CcCCcceEEEcCCCCCCCeeEEccC
Confidence 43221 122234443 48999999997532100 1122 688999 567999986
Q ss_pred CCCCCCCCcceeEEEE-CCEEEEEcCcCCCCC-cccceEEEEEEEeecCCCccccccc
Q 016201 331 PMPKPNSHIECAWVIV-NNSIIITGGTTEKHP-MTKRMILVGEVFQFHLDSLPSLQSR 386 (393)
Q Consensus 331 ~~~~~r~~~~~~~~~~-~~~i~v~GG~~~~~~-~~~~~~~~~~~y~~~~~~W~~~~~~ 386 (393)
+||.+|..+.+ +++ +++|||+||...... ........+++||+++++|+.+++.
T Consensus 451 ~mp~~R~~~~~--~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 451 GLYFARTFHTS--VVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp CCSSCCBSCEE--EECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred CCCCCcccCCe--EECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence 89999887533 555 999999999763211 0111122559999999999988753
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.79 E-value=0.0023 Score=58.43 Aligned_cols=186 Identities=10% Similarity=0.044 Sum_probs=97.8
Q ss_pred HhhhccEEEEecCCCCCCCCcccceeeeeecCCCce-EEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCC
Q 016201 28 AALIADFMWASSSSSFSSSSAHLSVASNWALEKSGV-VVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPD 106 (393)
Q Consensus 28 ~~~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (393)
+++.++++|+.... ++ .+.++|+++.+- ..++....| .++++..+...-........+..+|+.+
T Consensus 49 i~~~~~~lyv~~~~-~~-------~v~viD~~t~~~~~~i~~~~~p------~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 49 MVIRDGIGWIVVNN-SH-------VIFAIDINTFKEVGRITGFTSP------RYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp EEEETTEEEEEEGG-GT-------EEEEEETTTCCEEEEEECCSSE------EEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred EEEECCEEEEEEcC-CC-------EEEEEECcccEEEEEcCCCCCC------cEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 45568888888754 33 788999987765 335433222 2333311111000011234789999887
Q ss_pred CCeEEcCCCCcc----ccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEE
Q 016201 107 LEWEQMPSAPVP----RLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIY 182 (393)
Q Consensus 107 ~~W~~~~~~~~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iy 182 (393)
.+-...-+.... ..-..++..+++|||..-. ..+.+.++|+.+.+....-+... ........-++++|
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-----~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-----YQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMW 186 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-----TCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEE
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-----CCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEE
Confidence 754321111110 0223445578999998521 12569999999987654222221 11222223468888
Q ss_pred EEeceeCCC--CCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEc
Q 016201 183 IVSGQYGPQ--CRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMG 235 (393)
Q Consensus 183 v~GG~~~~~--~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 235 (393)
+........ .......++++|+.+.+-...-.++....-..++.. ++.||+..
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 886322110 000136799999998876533233322222344444 56788874
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.68 E-value=0.01 Score=51.49 Aligned_cols=195 Identities=13% Similarity=0.067 Sum_probs=114.3
Q ss_pred cCCCCccccCc--cEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeC
Q 016201 112 MPSAPVPRLDG--AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYG 189 (393)
Q Consensus 112 ~~~~~~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~ 189 (393)
+...|.....+ ++...++.||+-.|..+. +.+.++|+.+.+=..--+++. ...+.+++..+++||+....
T Consensus 12 ~~~~phd~~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~-- 83 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWR-- 83 (243)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--
T ss_pred EEEcCCCCccccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEee--
Confidence 33334444433 566678999999997654 568999999998665555554 24567788899999999532
Q ss_pred CCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEE-ec-
Q 016201 190 PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT-EI- 267 (393)
Q Consensus 190 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~-~~- 267 (393)
.+.++.||+.+.+ .+...+.+..+.+++.-+++||+.-|. +.+..+| |++.+-.. +.
T Consensus 84 ------~~~v~v~D~~tl~--~~~ti~~~~~Gwglt~dg~~L~vSdgs------~~l~~iD-------p~t~~~~~~I~V 142 (243)
T 3mbr_X 84 ------NHEGFVYDLATLT--PRARFRYPGEGWALTSDDSHLYMSDGT------AVIRKLD-------PDTLQQVGSIKV 142 (243)
T ss_dssp ------SSEEEEEETTTTE--EEEEEECSSCCCEEEECSSCEEEECSS------SEEEEEC-------TTTCCEEEEEEC
T ss_pred ------CCEEEEEECCcCc--EEEEEeCCCCceEEeeCCCEEEEECCC------CeEEEEe-------CCCCeEEEEEEE
Confidence 5679999998754 444344444556666667788888552 2333333 45543322 11
Q ss_pred -cCCCCCCc-eeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeCCC-C---CeEECCCCCC-------
Q 016201 268 -PIPRGGPH-RACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLDDE-M---KWKVLPPMPK------- 334 (393)
Q Consensus 268 -~~p~~~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~-~---~W~~~~~~~~------- 334 (393)
..+.+... -.+...+++||+---. .++|.+.|+. . .|..++.+..
T Consensus 143 ~~~g~~~~~lNeLe~~~G~lyanvw~----------------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~ 200 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWVNGELLANVWL----------------------TSRIARIDPASGKVVAWIDLQALVPDADALTD 200 (243)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETT----------------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCC
T ss_pred ccCCcccccceeeEEeCCEEEEEECC----------------------CCeEEEEECCCCCEEEEEECCcCccccccccC
Confidence 11211111 1344568998865422 2458889943 3 5556554321
Q ss_pred CCCCcceeEEEE--CCEEEEEcCcC
Q 016201 335 PNSHIECAWVIV--NNSIIITGGTT 357 (393)
Q Consensus 335 ~r~~~~~~~~~~--~~~i~v~GG~~ 357 (393)
+....--+++.. .+++||.|-..
T Consensus 201 ~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 201 STNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp TTSSCEEEEEEETTTTEEEEEETTC
T ss_pred CcCCceEEEEEcCCCCEEEEECCCC
Confidence 122122234444 57899987653
No 21
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.38 E-value=0.084 Score=48.61 Aligned_cols=255 Identities=13% Similarity=0.158 Sum_probs=129.5
Q ss_pred HHhhhccEEEEecCCCCCCCCcccceeeeeecCCCc--eEEecCCCCCc----cccccceeEEecCCcchhhHHhhccee
Q 016201 27 GAALIADFMWASSSSSFSSSSAHLSVASNWALEKSG--VVVIPHVNATK----IDRQRESVAVIDKKGQDAERFLSATFA 100 (393)
Q Consensus 27 ~~~~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~ 100 (393)
.-++.++.||+.... + .+.+||+++.+ |..-....... ........++.++.-.. ......++
T Consensus 48 ~p~v~~~~v~~~~~~--g-------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v--~~~~g~l~ 116 (376)
T 3q7m_A 48 HPALADNVVYAADRA--G-------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYI--GSEKAQVY 116 (376)
T ss_dssp CCEEETTEEEEECTT--S-------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEE--EETTSEEE
T ss_pred ccEEECCEEEEEcCC--C-------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEE--EcCCCEEE
Confidence 456678888887632 3 68899987544 76533211000 00111111111111110 01123688
Q ss_pred eccCCCC--CeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCc--eEeCCCCCCCCCcceeEEEE
Q 016201 101 DLPAPDL--EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 101 ~~~~~~~--~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~ 176 (393)
.+|..+. .|+.-..-. ...+.+..++.||+... ...+..+|+.+.+ |+.-...+....+.....+.
T Consensus 117 a~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 117 ALNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EEETTTCCEEEEEECSSC---CCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred EEECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 9998765 586543211 12233556888887543 1368999997765 87643222110122233445
Q ss_pred eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCCC--------CCceEEEECCEEEEEccCCCCCCCCCc
Q 016201 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPR--------YSPATQLWRGRLHVMGGSKENRHTPGL 246 (393)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~ 246 (393)
.++.+|+... ...+..||+.+.+ |+.-...+... .....++.++.+|+.+. ...+
T Consensus 187 ~~~~v~~g~~---------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l 251 (376)
T 3q7m_A 187 AFGAAVVGGD---------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNL 251 (376)
T ss_dssp ETTEEEECCT---------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCE
T ss_pred ECCEEEEEcC---------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEE
Confidence 5888777321 3458899987664 76543322211 22344566888888742 1233
Q ss_pred ceeEeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCC-
Q 016201 247 EHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM- 324 (393)
Q Consensus 247 ~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~- 324 (393)
.+++. ......|+.... .....+..++.||+.... + .++.+| .+.
T Consensus 252 ~~~d~-----~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~~-g----------------------~l~~~d~~tG~ 298 (376)
T 3q7m_A 252 TALDL-----RSGQIMWKRELG-----SVNDFIVDGNRIYLVDQN-D----------------------RVMALTIDGGV 298 (376)
T ss_dssp EEEET-----TTCCEEEEECCC-----CEEEEEEETTEEEEEETT-C----------------------CEEEEETTTCC
T ss_pred EEEEC-----CCCcEEeeccCC-----CCCCceEECCEEEEEcCC-C----------------------eEEEEECCCCc
Confidence 33432 123335765321 122455668899987642 1 288898 433
Q ss_pred -CeEECCCCCCCCCCcceeEEEECCEEEEEc
Q 016201 325 -KWKVLPPMPKPNSHIECAWVIVNNSIIITG 354 (393)
Q Consensus 325 -~W~~~~~~~~~r~~~~~~~~~~~~~i~v~G 354 (393)
.|+.-. ++.... ...++.+++||+..
T Consensus 299 ~~w~~~~-~~~~~~---~~~~~~~~~l~v~~ 325 (376)
T 3q7m_A 299 TLWTQSD-LLHRLL---TSPVLYNGNLVVGD 325 (376)
T ss_dssp EEEEECT-TTTSCC---CCCEEETTEEEEEC
T ss_pred EEEeecc-cCCCcc---cCCEEECCEEEEEe
Confidence 787642 221111 22356788888863
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.35 E-value=0.027 Score=51.13 Aligned_cols=163 Identities=9% Similarity=0.009 Sum_probs=90.8
Q ss_pred hcceeeccCCCCCeEEcC-----CCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCce-EeCCCCCCCCCc
Q 016201 96 SATFADLPAPDLEWEQMP-----SAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VDRFDMPKDMAH 169 (393)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~-----~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~~~r 169 (393)
+..+..+|+.+.+....- ..+.......++..++++|+.... ...+.++|+.+.+- ..++....
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~~~---- 85 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITGFTS---- 85 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEECCSS----
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCCCCC----
Confidence 347888898887765421 111122234456679999998753 25699999998775 33432222
Q ss_pred ceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCC----CCCceEEEECCEEEEEccCCCCCCCC
Q 016201 170 SHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSP----RYSPATQLWRGRLHVMGGSKENRHTP 244 (393)
Q Consensus 170 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~ 244 (393)
...++. .++++|+.... ...+.++|+.+.+-...-+.... ..-..+++.++++|+..-. ..+
T Consensus 86 -p~~i~~~~~g~lyv~~~~--------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~ 152 (328)
T 3dsm_A 86 -PRYIHFLSDEKAYVTQIW--------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQN 152 (328)
T ss_dssp -EEEEEEEETTEEEEEEBS--------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCC
T ss_pred -CcEEEEeCCCeEEEEECC--------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCC
Confidence 223444 67899998632 46699999998764321111110 0223445578999998520 123
Q ss_pred CcceeEeeeeccccccCCeEEeccCC-CCCCceeEEEECCEEEEEcC
Q 016201 245 GLEHWSIAVKDGKALEKAWRTEIPIP-RGGPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 245 ~~~~~~~~~~d~~~~~~~W~~~~~~p-~~~~~~~~~~~~~~iyv~GG 290 (393)
.+.+++ +.+.+....-+.. .+. ..++.-++++|+...
T Consensus 153 ~v~viD-------~~t~~~~~~i~~g~~p~--~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 153 RILKID-------TETDKVVDELTIGIQPT--SLVMDKYNKMWTITD 190 (328)
T ss_dssp EEEEEE-------TTTTEEEEEEECSSCBC--CCEECTTSEEEEEBC
T ss_pred EEEEEE-------CCCCeEEEEEEcCCCcc--ceEEcCCCCEEEEEC
Confidence 444454 4555443322221 111 122334689888764
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.23 E-value=0.0093 Score=52.23 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=67.1
Q ss_pred cEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEE
Q 016201 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVL 202 (393)
Q Consensus 123 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 202 (393)
++...++.||+-.|..+. +.+.++|+.+.+=..--+++. ...+.+++..+++||+.-.. .+.++.|
T Consensus 47 GL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~ltw~--------~~~v~v~ 112 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLTWK--------NGLGFVW 112 (262)
T ss_dssp EEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--------SSEEEEE
T ss_pred eEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEEee--------CCEEEEE
Confidence 344458999999997653 568999999988655444543 24566788899999999532 5679999
Q ss_pred eCCCCCeEeCCCCCCCCCCceEEEECCEEEEEcc
Q 016201 203 DSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (393)
Q Consensus 203 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 236 (393)
|+++.+= +...+.+-.+.+++.-++.||+.-|
T Consensus 113 D~~t~~~--~~ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 113 NIRNLRQ--VRSFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp ETTTCCE--EEEEECSSCCCCEEECSSCEEECCS
T ss_pred ECccCcE--EEEEECCCCceEEecCCCEEEEECC
Confidence 9988653 3333333355566655667887754
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.18 E-value=0.011 Score=51.14 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=72.9
Q ss_pred CCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCC
Q 016201 161 FDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKEN 240 (393)
Q Consensus 161 ~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 240 (393)
...|.+....-.++...++.+|+..|..+ .+.+..+|+++.+=...-+++......+++..+++||++...+
T Consensus 13 ~~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-- 84 (243)
T 3mbr_X 13 KRYPHDTTAFTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-- 84 (243)
T ss_dssp EEEECCTTCCEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--
T ss_pred EEcCCCCccccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC--
Confidence 33344333455577788999999988654 4679999999988665556665556677788899999996542
Q ss_pred CCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcC
Q 016201 241 RHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 241 ~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG 290 (393)
+.+.+|| + .+.+.+...+.+..+.+++.-++++|+.-|
T Consensus 85 ---~~v~v~D-------~--~tl~~~~ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 85 ---HEGFVYD-------L--ATLTPRARFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp ---SEEEEEE-------T--TTTEEEEEEECSSCCCEEEECSSCEEEECS
T ss_pred ---CEEEEEE-------C--CcCcEEEEEeCCCCceEEeeCCCEEEEECC
Confidence 3444454 2 333444444434455577766778888765
No 25
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.09 E-value=0.0063 Score=56.34 Aligned_cols=179 Identities=13% Similarity=0.070 Sum_probs=88.6
Q ss_pred cEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcch-hhHHhhcceeeccCCCCCeEE
Q 016201 33 DFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQD-AERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 33 ~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~W~~ 111 (393)
.++|+.|+. ++ .+..||+.+.+-...-.... ...+++...+.... ........+..+|..+.+-..
T Consensus 2 ~~l~vs~~~-d~-------~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 2 TFAYIANSE-SD-------NISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEEETT-TT-------EEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CEEEEEcCC-CC-------EEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEE
Confidence 568888877 66 78899987765433222111 11222222222111 111123478888887665433
Q ss_pred cCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe--CCEEEEEece
Q 016201 112 MPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQ 187 (393)
Q Consensus 112 ~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~ 187 (393)
.-..+. .-.+++.. +..||+.+..+ ..+.+||+.+++-...-.... ...+++.. +..+|+.++.
T Consensus 69 ~~~~~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 69 TVPAGS--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp EEECSS--SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETT
T ss_pred EEECCC--CccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEEEEeCC
Confidence 222211 11122222 34566665432 458999999887544322221 12333332 4467777642
Q ss_pred eCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 188 YGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
...+..||+.+.+....-... ..-..++.. ++.||+.++.+ ..+..|++
T Consensus 137 --------~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~ 187 (391)
T 1l0q_A 137 --------DKTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS-----MSISVIDT 187 (391)
T ss_dssp --------TTEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-----TEEEEEET
T ss_pred --------CCEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEEC
Confidence 356899999887654332211 111222222 33576766542 34555653
No 26
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.07 E-value=0.051 Score=51.33 Aligned_cols=161 Identities=11% Similarity=0.056 Sum_probs=78.3
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD 177 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~ 177 (393)
.+..+|..+.+-.. .+......-.+...++..++.|+.+ ..+..||+.+.+-...-... ......+..
T Consensus 180 ~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~----~~~v~~~~~ 247 (445)
T 2ovr_B 180 TLKVWNAETGECIH--TLYGHTSTVRCMHLHEKRVVSGSRD------ATLRVWDIETGQCLHVLMGH----VAAVRCVQY 247 (445)
T ss_dssp CEEEEETTTTEEEE--EECCCSSCEEEEEEETTEEEEEETT------SEEEEEESSSCCEEEEEECC----SSCEEEEEE
T ss_pred eEEEEECCcCcEEE--EECCCCCcEEEEEecCCEEEEEeCC------CEEEEEECCCCcEEEEEcCC----cccEEEEEE
Confidence 56677766543211 1111112222333455566777754 35888998876533211111 111222233
Q ss_pred CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccc
Q 016201 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGK 257 (393)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~ 257 (393)
++..++.|+.+ ..+..||+.+.+-. ..+.........+..++..++.|+.+ ..+..|++
T Consensus 248 ~~~~l~~~~~d--------g~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~------ 306 (445)
T 2ovr_B 248 DGRRVVSGAYD--------FMVKVWDPETETCL--HTLQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDV------ 306 (445)
T ss_dssp CSSCEEEEETT--------SCEEEEEGGGTEEE--EEECCCSSCEEEEEECSSEEEEEETT-----SCEEEEET------
T ss_pred CCCEEEEEcCC--------CEEEEEECCCCcEe--EEecCCCCceEEEEECCCEEEEEeCC-----CeEEEEEC------
Confidence 66677777543 34778888765422 22221122223344477777777764 45666764
Q ss_pred cccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCCC
Q 016201 258 ALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD 294 (393)
Q Consensus 258 ~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~ 294 (393)
.+.+ .+..+........++..++..++.|+.++.
T Consensus 307 -~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 340 (445)
T 2ovr_B 307 -ETGN--CIHTLTGHQSLTSGMELKDNILVSGNADST 340 (445)
T ss_dssp -TTCC--EEEEECCCCSCEEEEEEETTEEEEEETTSC
T ss_pred -CCCC--EEEEEcCCcccEEEEEEeCCEEEEEeCCCe
Confidence 2222 122222222223444556777777876653
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.01 E-value=0.18 Score=46.27 Aligned_cols=195 Identities=18% Similarity=0.222 Sum_probs=105.5
Q ss_pred ceeeccCCCC--CeEEcCCCC-------ccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCc--eEeCCCCCCC
Q 016201 98 TFADLPAPDL--EWEQMPSAP-------VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKD 166 (393)
Q Consensus 98 ~~~~~~~~~~--~W~~~~~~~-------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~ 166 (393)
.++.+|..+. .|+.-.... ........+..++.||+.... ..+.++|+.+.+ |+.-. +.+
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~--~~~ 134 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKV--AGE 134 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEEC--SSC
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeC--CCc
Confidence 6888887654 586544321 111223345668899885431 468999998764 76532 221
Q ss_pred CCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCC--CCCCceEEEECCEEEEEccCCCCCC
Q 016201 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVMGGSKENRH 242 (393)
Q Consensus 167 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~ 242 (393)
. ....++.++.+|+... ...++.||+.+.+ |+.....+. .+...+.++.++.+|+. ...
T Consensus 135 ~---~~~p~~~~~~v~v~~~---------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~~---- 197 (376)
T 3q7m_A 135 A---LSRPVVSDGLVLIHTS---------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GDN---- 197 (376)
T ss_dssp C---CSCCEEETTEEEEECT---------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CTT----
T ss_pred e---EcCCEEECCEEEEEcC---------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cCC----
Confidence 1 1223456888888542 3469999998765 876543221 12233445668877763 221
Q ss_pred CCCcceeEeeeeccccccCCeEEeccCCCCC--------CceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceec
Q 016201 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPRGG--------PHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVY 314 (393)
Q Consensus 243 ~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
..+..++ .......|+.....|... .....+..++.+|+.+. ++
T Consensus 198 -g~l~~~d-----~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~g--------------------- 249 (376)
T 3q7m_A 198 -GRVSAVL-----MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-NG--------------------- 249 (376)
T ss_dssp -TEEEEEE-----TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-TS---------------------
T ss_pred -CEEEEEE-----CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-Cc---------------------
Confidence 1233333 223344677654333211 12244566888888752 22
Q ss_pred CceEEeC-CCC--CeEECCCCCCCCCCcceeEEEECCEEEEEc
Q 016201 315 GDVYMLD-DEM--KWKVLPPMPKPNSHIECAWVIVNNSIIITG 354 (393)
Q Consensus 315 ~~v~~yd-~~~--~W~~~~~~~~~r~~~~~~~~~~~~~i~v~G 354 (393)
.++.+| .+. .|+.-.. . ....++.+++||+..
T Consensus 250 -~l~~~d~~tG~~~w~~~~~--~-----~~~~~~~~~~l~~~~ 284 (376)
T 3q7m_A 250 -NLTALDLRSGQIMWKRELG--S-----VNDFIVDGNRIYLVD 284 (376)
T ss_dssp -CEEEEETTTCCEEEEECCC--C-----EEEEEEETTEEEEEE
T ss_pred -EEEEEECCCCcEEeeccCC--C-----CCCceEECCEEEEEc
Confidence 288888 332 7876421 1 123466788888874
No 28
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.96 E-value=0.17 Score=44.32 Aligned_cols=172 Identities=9% Similarity=0.042 Sum_probs=82.2
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (393)
++.||+.... .+ .+.+||+. .....++. +.. .....++++-.+...-.....+..+..+|+. .+...
T Consensus 30 ~g~l~v~~~~-~~-------~v~~~~~~-~~~~~~~~-~~~--~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 30 DGKVWFTQHK-AN-------KISSLDQS-GRIKEFEV-PTP--DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TSCEEEEETT-TT-------EEEEECTT-SCEEEEEC-SST--TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCEEEEcCC-CC-------eEEEECCC-CceEEEEC-CCC--CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4668876543 23 67888877 55554332 110 0112223322211111111123368888887 66654
Q ss_pred cCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeC
Q 016201 112 MPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYG 189 (393)
Q Consensus 112 ~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~ 189 (393)
.........-.+++.. ++.||+..... ..+.+||+. .+..... ++... ....+++. -++++|+...
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~~-~~~~~i~~d~~g~l~v~~~--- 164 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYD-LPNKG-SYPAFITLGSDNALWFTEN--- 164 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEE-CSSTT-CCEEEEEECTTSSEEEEET---
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEcc-CCCCC-CCceeEEECCCCCEEEEec---
Confidence 3221111112233332 57888875321 358889987 5555432 22211 22233443 3567888752
Q ss_pred CCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEc
Q 016201 190 PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMG 235 (393)
Q Consensus 190 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 235 (393)
....+++||+ +.+..... ++........+.+ ++.||+..
T Consensus 165 -----~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 165 -----QNNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp -----TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred -----CCCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEc
Confidence 1356889998 56665532 1211112222233 56788774
No 29
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.95 E-value=0.11 Score=47.09 Aligned_cols=150 Identities=6% Similarity=-0.014 Sum_probs=69.5
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (393)
++.+++.|+. ++ .+..||+.+..+..+..+.... .....++...+............+..+|..+.++..
T Consensus 19 ~~~~l~~~~~-d~-------~v~i~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPN-NH-------EVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECS-SS-------EEEEEEEETTEEEEEEEEECCS--SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEEeC-CC-------EEEEEeCCCCcEEeeeeecCCC--CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 4556777776 66 7889998888765554443220 111222222221111111122356777776666544
Q ss_pred cCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCc-eEeCCCCCCCCCcceeEEEE-eCCEEEEEece
Q 016201 112 MPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQ 187 (393)
Q Consensus 112 ~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~ 187 (393)
...+.........+.+ +++.++.|+.++ .+..||+.+.+ |.....+..+....-.+++. -++..++.|+.
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 3322222222222222 456777777543 35566655443 33222221111111223333 25666777653
Q ss_pred eCCCCCCCCCeeEEEeCC
Q 016201 188 YGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~ 205 (393)
+ ..+..||..
T Consensus 163 d--------g~i~~~d~~ 172 (372)
T 1k8k_C 163 D--------FKCRIFSAY 172 (372)
T ss_dssp T--------SCEEEEECC
T ss_pred C--------CCEEEEEcc
Confidence 2 347778854
No 30
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.94 E-value=0.065 Score=50.58 Aligned_cols=137 Identities=14% Similarity=0.164 Sum_probs=69.4
Q ss_pred EEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 125 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
+..++..++.|+.++ .+..||+.+.+-.. .+... ...-.++. .++..++.|+.+ ..+..||.
T Consensus 245 ~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~--~~~~~-~~~v~~~~-~~~~~l~~~~~d--------~~i~i~d~ 306 (445)
T 2ovr_B 245 VQYDGRRVVSGAYDF------MVKVWDPETETCLH--TLQGH-TNRVYSLQ-FDGIHVVSGSLD--------TSIRVWDV 306 (445)
T ss_dssp EEECSSCEEEEETTS------CEEEEEGGGTEEEE--EECCC-SSCEEEEE-ECSSEEEEEETT--------SCEEEEET
T ss_pred EEECCCEEEEEcCCC------EEEEEECCCCcEeE--EecCC-CCceEEEE-ECCCEEEEEeCC--------CeEEEEEC
Confidence 444777777777653 47888887664322 22211 01122333 366666776543 34888998
Q ss_pred CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeE-EeccCCCCCCceeEEEECC
Q 016201 205 ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWR-TEIPIPRGGPHRACFVFND 283 (393)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~-~~~~~p~~~~~~~~~~~~~ 283 (393)
.+.+-... +............++.+++.|+.+ ..+..|++ .+.+-. .+...........++..++
T Consensus 307 ~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~-------~~~~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 307 ETGNCIHT--LTGHQSLTSGMELKDNILVSGNAD-----STVKIWDI-------KTGQCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp TTCCEEEE--ECCCCSCEEEEEEETTEEEEEETT-----SCEEEEET-------TTCCEEEEECSTTSCSSCEEEEEECS
T ss_pred CCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEEC-------CCCcEEEEEccCCCCCCCEEEEEECC
Confidence 87653221 111112223334455566666653 45666764 222211 1111111222234556678
Q ss_pred EEEEEcCCCC
Q 016201 284 RLFVVGGQEG 293 (393)
Q Consensus 284 ~iyv~GG~~~ 293 (393)
..++.|+.++
T Consensus 373 ~~l~s~~~dg 382 (445)
T 2ovr_B 373 NFVITSSDDG 382 (445)
T ss_dssp SEEEEEETTS
T ss_pred CEEEEEeCCC
Confidence 8888888765
No 31
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.85 E-value=0.063 Score=48.11 Aligned_cols=99 Identities=9% Similarity=-0.002 Sum_probs=44.8
Q ss_pred ceeeccCC--CCCeEEcCCCCccccCccEEEE-CC-EEEEEecCCCCCCccceEEEEECCCC-ceEeCCCCCCCCCccee
Q 016201 98 TFADLPAP--DLEWEQMPSAPVPRLDGAAIQI-KN-LFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHL 172 (393)
Q Consensus 98 ~~~~~~~~--~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~ 172 (393)
.+..|+.. +.+++.+..++.+..-..++.. ++ .||+.+..+ ..+.+||+... ..+.+..++....-...
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 134 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGLDGCHSA 134 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCCTTBCCC
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCCCCceEE
Confidence 55555544 6677655443322212222222 33 466655422 34777777322 22222222221111122
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC-CCeE
Q 016201 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET-RKWD 210 (393)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~-~~W~ 210 (393)
+..-.+..+|+.+.. ...+..||..+ .+..
T Consensus 135 ~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 135 NISPDNRTLWVPALK--------QDRICLFTVSDDGHLV 165 (343)
T ss_dssp EECTTSSEEEEEEGG--------GTEEEEEEECTTSCEE
T ss_pred EECCCCCEEEEecCC--------CCEEEEEEecCCCcee
Confidence 222224467776522 24588888877 5554
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.04 Score=50.22 Aligned_cols=172 Identities=9% Similarity=0.045 Sum_probs=84.0
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEEC----CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIK----NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 173 (393)
.+..+|....+++.+..+......-..+.+. +.+++.|+.++ .+.+||+.+.+|..+..+.... ..-.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~-~~v~~ 106 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVHS-ASVNS 106 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS------CEEEEEEETTEEEEEEEECCCS-SCEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC------EEEEEEcCCCceeEeeeecCCC-cceEE
Confidence 4555665544454443333222222223332 56777777653 4788899898887665444311 22223
Q ss_pred EEEe-C--CEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCC-CCCCCceEEEE--------------CCEEEEEc
Q 016201 174 VVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP-SPRYSPATQLW--------------RGRLHVMG 235 (393)
Q Consensus 174 ~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--------------~~~iyv~G 235 (393)
++.. + +.+++.|+. ...+..||..+..-.....+. ....-.++... ++.+++.|
T Consensus 107 ~~~~~~~~~~~l~~~~~--------d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVASS--------DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 178 (379)
T ss_dssp EEECCGGGCSEEEEEET--------TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEE
T ss_pred EEeCCCCCCCEEEEecC--------CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEE
Confidence 3332 3 556666653 245777887765321110010 01111112222 46777777
Q ss_pred cCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE--C---CEEEEEcCCCCC
Q 016201 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--N---DRLFVVGGQEGD 294 (393)
Q Consensus 236 G~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~--~---~~iyv~GG~~~~ 294 (393)
+.+ ..+..|++. .....+.....+.........+.. + +++++.|+.++.
T Consensus 179 ~~d-----g~i~i~d~~-----~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 179 GAD-----NLVKIWKYN-----SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp ETT-----SCEEEEEEE-----TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred eCC-----CeEEEEEec-----CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 764 356677752 233335444443322222233333 4 788888887653
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.74 E-value=0.027 Score=49.31 Aligned_cols=112 Identities=15% Similarity=0.115 Sum_probs=68.3
Q ss_pred eCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCC
Q 016201 159 DRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (393)
Q Consensus 159 ~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 238 (393)
.+...|....-...++...++.+|+..|..+ .+.+.++|+++.+=...-+++......+++..+++||+....+
T Consensus 33 vv~~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEECCTTCEEEEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS
T ss_pred EEEEecCCCCcccceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC
Confidence 3333444322334456666899999998654 4568999999987654445554444556788899999996542
Q ss_pred CCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcC
Q 016201 239 ENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG 290 (393)
+.+.+|| +++.+ .+...+....+.+++.-++++|+.-|
T Consensus 107 -----~~v~v~D-------~~t~~--~~~ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 107 -----GLGFVWN-------IRNLR--QVRSFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp -----SEEEEEE-------TTTCC--EEEEEECSSCCCCEEECSSCEEECCS
T ss_pred -----CEEEEEE-------CccCc--EEEEEECCCCceEEecCCCEEEEECC
Confidence 3445554 33333 33333333344566666667777755
No 34
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.60 E-value=0.072 Score=48.05 Aligned_cols=134 Identities=10% Similarity=0.054 Sum_probs=65.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++.++.|+.+ ..+..||..+.+-...-.... ..-.+++. -+++.++.|+.+ ..+..||..+
T Consensus 133 dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~~~~---~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHV------GKVNIFGVESGKKEYSLDTRG---KFILSIAYSPDGKYLASGAID--------GIINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTT------SEEEEEETTTCSEEEEEECSS---SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCceeEEecCCC---ceEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 56677777754 357788887765322111111 11222232 356677777543 3478899887
Q ss_pred CCeEe-CCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE--C
Q 016201 207 RKWDS-IPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--N 282 (393)
Q Consensus 207 ~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~--~ 282 (393)
.+-.. +..... .-.+++.. ++++++.|+.+ ..+..|++ .+.... ..+.........+.+ +
T Consensus 196 ~~~~~~~~~h~~--~v~~l~~spd~~~l~s~s~d-----g~i~iwd~-------~~~~~~--~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 196 GKLLHTLEGHAM--PIRSLTFSPDSQLLVTASDD-----GYIKIYDV-------QHANLA--GTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp TEEEEEECCCSS--CCCEEEECTTSCEEEEECTT-----SCEEEEET-------TTCCEE--EEECCCSSCEEEEEECTT
T ss_pred CcEEEEEcccCC--ceeEEEEcCCCCEEEEEcCC-----CeEEEEEC-------CCccee--EEEcCCCCceEEEEECCC
Confidence 65322 111111 11122222 56777777654 45667764 222221 122211111122333 6
Q ss_pred CEEEEEcCCCCC
Q 016201 283 DRLFVVGGQEGD 294 (393)
Q Consensus 283 ~~iyv~GG~~~~ 294 (393)
++.++.|+.++.
T Consensus 260 ~~~l~s~s~D~~ 271 (321)
T 3ow8_A 260 DTHFVSSSSDKS 271 (321)
T ss_dssp SSEEEEEETTSC
T ss_pred CCEEEEEeCCCc
Confidence 777788877653
No 35
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.56 E-value=0.09 Score=46.04 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=66.5
Q ss_pred ccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEE
Q 016201 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (393)
Q Consensus 122 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (393)
.++...++.||+..|..+ .+.++|+++.+=..-- ++. ...+.+++..+++||+.... .+.++.
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~--------~~~v~V 120 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLG--NIFAEGLASDGERLYQLTWT--------EGLLFT 120 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSCEEEEESS--------SCEEEE
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCEEEEEEcc--------CCEEEE
Confidence 345556899999999764 2888999988754333 443 24456788889999998532 467999
Q ss_pred EeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEcc
Q 016201 202 LDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (393)
Q Consensus 202 yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 236 (393)
||+++.+= +...+.+..+.+++.-+++||+.-|
T Consensus 121 ~D~~Tl~~--~~ti~~~~eGwGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 121 WSGMPPQR--ERTTRYSGEGWGLCYWNGKLVRSDG 153 (268)
T ss_dssp EETTTTEE--EEEEECSSCCCCEEEETTEEEEECS
T ss_pred EECCcCcE--EEEEeCCCceeEEecCCCEEEEECC
Confidence 99987643 3333334455677777888999865
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.53 E-value=0.11 Score=48.25 Aligned_cols=134 Identities=5% Similarity=-0.051 Sum_probs=63.5
Q ss_pred eeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEEcCCCCccccCccEEEECCEE
Q 016201 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLF 131 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~i 131 (393)
.+..||..+.....+...... .....++...+............+..+|..+.+-... +.........+..++.+
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~---~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~ 188 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDES---TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT--MAGHQARVGCLSWNRHV 188 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTT---CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEEETTE
T ss_pred eEEEeeCCCCcEeEeeecCCC---CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE--ecCCCCceEEEEECCCE
Confidence 688888887776554433111 1112222222111111111233567777666543221 11112222233446667
Q ss_pred EEEecCCCCCCccceEEEEECCCCce--EeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC
Q 016201 132 YVFAGYGSLDYVHSHVDVYNFTDNKW--VDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 132 yv~GG~~~~~~~~~~~~~yd~~~~~W--~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
++.|+.+ ..+..||+.+..- ..+.... ..-.+++. -++.+++.|+.+ ..+..||..+.+
T Consensus 189 l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~~~ 250 (401)
T 4aez_A 189 LSSGSRS------GAIHHHDVRIANHQIGTLQGHS----SEVCGLAWRSDGLQLASGGND--------NVVQIWDARSSI 250 (401)
T ss_dssp EEEEETT------SEEEEEETTSSSCEEEEEECCS----SCEEEEEECTTSSEEEEEETT--------SCEEEEETTCSS
T ss_pred EEEEcCC------CCEEEEecccCcceeeEEcCCC----CCeeEEEEcCCCCEEEEEeCC--------CeEEEccCCCCC
Confidence 7777765 3588888874321 1111111 11222332 256677777643 348889988754
No 37
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.48 E-value=0.14 Score=48.19 Aligned_cols=215 Identities=13% Similarity=0.070 Sum_probs=99.7
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (393)
++..++.|+. ++ .+..||..+..-... +... ......+.. .+. ..........+..+|..+.+-..
T Consensus 142 d~~~l~~g~~-dg-------~i~iwd~~~~~~~~~--~~~h--~~~v~~l~~-~~~-~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 142 DDQKIVSGLR-DN-------TIKIWDKNTLECKRI--LTGH--TGSVLCLQY-DER-VIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp CSSEEEEEES-SS-------CEEEEESSSCCEEEE--ECCC--SSCEEEEEC-CSS-EEEEEETTSCEEEEESSSCCEEE
T ss_pred CCCEEEEEeC-CC-------eEEEEeCCCCeEEEE--EcCC--CCcEEEEEE-CCC-EEEEEcCCCeEEEEECCCCcEEE
Confidence 4556677776 66 788888766543222 1111 000111111 111 11111123357777766654321
Q ss_pred cCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeC-CCCCCCCCcceeEEEEeCCEEEEEeceeCC
Q 016201 112 MPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVSDGRYIYIVSGQYGP 190 (393)
Q Consensus 112 ~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~ 190 (393)
. +.........+...+..++.|+.++ .+..||+.+.+-... ..+... ...-.++.. ++..++.|+.
T Consensus 208 ~--~~~h~~~v~~l~~~~~~l~s~s~dg------~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~l~s~~~--- 274 (435)
T 1p22_A 208 T--LIHHCEAVLHLRFNNGMMVTCSKDR------SIAVWDMASPTDITLRRVLVGH-RAAVNVVDF-DDKYIVSASG--- 274 (435)
T ss_dssp E--ECCCCSCEEEEECCTTEEEEEETTS------CEEEEECSSSSCCEEEEEECCC-SSCEEEEEE-ETTEEEEEET---
T ss_pred E--EcCCCCcEEEEEEcCCEEEEeeCCC------cEEEEeCCCCCCceeeeEecCC-CCcEEEEEe-CCCEEEEEeC---
Confidence 1 1111112222334556777777653 478888876542111 111110 011223333 5555566543
Q ss_pred CCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCC
Q 016201 191 QCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP 270 (393)
Q Consensus 191 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p 270 (393)
...+..||..+.+-... +........++..++.+++.|+.+ ..+..|++ .+.+ .+..+.
T Consensus 275 -----dg~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~-------~~~~--~~~~~~ 333 (435)
T 1p22_A 275 -----DRTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDI-------ECGA--CLRVLE 333 (435)
T ss_dssp -----TSEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETT-----SCEEEEET-------TTCC--EEEEEC
T ss_pred -----CCeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEEC-------CCCC--EEEEEe
Confidence 34588899887653221 111112223344466677777653 45667764 2222 222222
Q ss_pred CCCCceeEEEECCEEEEEcCCCCC
Q 016201 271 RGGPHRACFVFNDRLFVVGGQEGD 294 (393)
Q Consensus 271 ~~~~~~~~~~~~~~iyv~GG~~~~ 294 (393)
.......++..+++.++.|+.++.
T Consensus 334 ~h~~~v~~~~~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 334 GHEELVRCIRFDNKRIVSGAYDGK 357 (435)
T ss_dssp CCSSCEEEEECCSSEEEEEETTSC
T ss_pred CCcCcEEEEEecCCEEEEEeCCCc
Confidence 222223455568888888887653
No 38
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.47 E-value=0.25 Score=43.41 Aligned_cols=99 Identities=14% Similarity=0.054 Sum_probs=63.1
Q ss_pred ccEEEEC-CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeE
Q 016201 122 GAAIQIK-NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (393)
Q Consensus 122 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 200 (393)
+.++... +.||+..|..+. +.+.++|+.+.+=..--+++. .....+++..++++|+..- ..+.+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~----s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~lyv~t~--------~~~~v~ 89 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGR----SSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEKLYQVVW--------LKNIGF 89 (266)
T ss_dssp EEEEECSTTEEEEEECSTTT----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEET--------TCSEEE
T ss_pred ccEEEeCCCeEEEECCCCCC----CEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCEEEEEEe--------cCCEEE
Confidence 3454444 799998875432 569999999988554333332 2345577778999999963 256799
Q ss_pred EEeCCCCCeEeCCCCCCC-CCCceEEEECCEEEEEcc
Q 016201 201 VLDSETRKWDSIPPLPSP-RYSPATQLWRGRLHVMGG 236 (393)
Q Consensus 201 ~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG 236 (393)
.||+.+.+ .+..++.+ ..+.+++.-++++|+.-|
T Consensus 90 viD~~t~~--v~~~i~~g~~~g~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 90 IYDRRTLS--NIKNFTHQMKDGWGLATDGKILYGSDG 124 (266)
T ss_dssp EEETTTTE--EEEEEECCSSSCCEEEECSSSEEEECS
T ss_pred EEECCCCc--EEEEEECCCCCeEEEEECCCEEEEECC
Confidence 99998754 33333322 233444444567888754
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.073 Score=48.39 Aligned_cols=190 Identities=11% Similarity=0.031 Sum_probs=91.3
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecC--CcchhhHHhhcceeeccCCCCCe
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDK--KGQDAERFLSATFADLPAPDLEW 109 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W 109 (393)
++.+++.|+. ++ .+..||....++..+..+.... .....++.... ............+..+|..+.+|
T Consensus 22 ~~~~l~~~~~-dg-------~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSS-DK-------TIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEET-TS-------CEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred CCCEEEEEEC-CC-------cEEEEecCCCcceeeeEecCCC--CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence 4556677776 66 6888887766665554443220 11112222111 11111111223677777777776
Q ss_pred EEcCCCCccccCccEEEE--C--CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe--------
Q 016201 110 EQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-------- 177 (393)
Q Consensus 110 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-------- 177 (393)
..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+..-.....+... ...-.+++..
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECC-TTCEEEEEECCCC-----
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCC-CCceEEEEEcCccccccc
Confidence 555444332222223333 2 5677777754 3578888877632111111110 0112222222
Q ss_pred ------CCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCCCCCceEEEE--C---CEEEEEccCCCCCCCC
Q 016201 178 ------GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPRYSPATQLW--R---GRLHVMGGSKENRHTP 244 (393)
Q Consensus 178 ------~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~~~~~~ 244 (393)
++.+++.|+.++ .+..||..+.. +..+..+.........+.. + +.+++.|+.+ .
T Consensus 165 ~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----g 231 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADN--------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----R 231 (379)
T ss_dssp -----CTTCEEEEEETTS--------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-----S
T ss_pred cccCCCCCCEEEEEeCCC--------eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-----C
Confidence 467777776432 36777765443 4444333322222222222 3 6778887764 3
Q ss_pred CcceeEe
Q 016201 245 GLEHWSI 251 (393)
Q Consensus 245 ~~~~~~~ 251 (393)
.+..|++
T Consensus 232 ~i~iwd~ 238 (379)
T 3jrp_A 232 TCIIWTQ 238 (379)
T ss_dssp CEEEEEE
T ss_pred EEEEEeC
Confidence 5677775
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.38 E-value=0.44 Score=41.52 Aligned_cols=171 Identities=8% Similarity=0.067 Sum_probs=80.8
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (393)
++.||+.... .+ .+..||+. ............ ....++++-.+...-........+..+++. .+.+.
T Consensus 25 ~g~l~v~~~~-~~-------~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 91 (299)
T 2z2n_A 25 KGKVWITQHK-AN-------MISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKE 91 (299)
T ss_dssp TSCEEEEETT-TT-------EEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCEEEEecC-CC-------cEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEE
Confidence 4567775432 22 67888887 666554321111 112222222211111111112357888875 44444
Q ss_pred cCCCCcc-ccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEecee
Q 016201 112 MPSAPVP-RLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQY 188 (393)
Q Consensus 112 ~~~~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~ 188 (393)
.. ++.. ..-.+++.. ++.||+..... ..+.++|+ +.+..... ++... ....+++.. ++.+|+...
T Consensus 92 ~~-~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~d~-~g~~~~~~-~~~~~-~~~~~i~~~~~g~l~v~~~-- 159 (299)
T 2z2n_A 92 YT-LPNPDSAPYGITEGPNGDIWFTEMNG------NRIGRITD-DGKIREYE-LPNKG-SYPSFITLGSDNALWFTEN-- 159 (299)
T ss_dssp EE-CSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEE-CSSTT-CCEEEEEECTTSCEEEEET--
T ss_pred Ee-CCCcCCCceeeEECCCCCEEEEecCC------ceEEEECC-CCCEEEec-CCCCC-CCCceEEEcCCCCEEEEeC--
Confidence 33 2211 111223332 57888875431 45888998 55555432 12111 222344443 678888752
Q ss_pred CCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCc-eEEEE-CCEEEEEc
Q 016201 189 GPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP-ATQLW-RGRLHVMG 235 (393)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~G 235 (393)
....+.+||+ +.+..... ++...... .++.. ++.||+..
T Consensus 160 ------~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 160 ------QNNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp ------TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred ------CCCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEc
Confidence 1356899999 66666531 11111111 22222 46788775
No 41
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.19 Score=45.39 Aligned_cols=145 Identities=10% Similarity=0.118 Sum_probs=67.2
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCC--CceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
+++.++.|+.++ .+.++|+.. ..++.+..+.... ..-.+++. -++.+++.|+.++ .+..||.
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISVLQEHS-QDVKHVIWHPSEALLASSSYDD--------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCCS-SCEEEEEECSSSSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccCC-CceEEEEECCCCCEEEEEcCCC--------eEEEEEC
Confidence 567777777653 477788742 3444433332210 11122222 3566777776432 3667777
Q ss_pred CCCCeEeCCCCCCCCCCceEEEE-C---CEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCC-CCCceeEE
Q 016201 205 ETRKWDSIPPLPSPRYSPATQLW-R---GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR-GGPHRACF 279 (393)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~-~~~~~~~~ 279 (393)
.+..|+.+..+......-..+.+ . +..++.|+. ...+..|++..-. ......|.....++. .......+
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-----D~~v~iw~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD-----DSTVRVWKYMGDD-EDDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEET-----TSCEEEEEEEEEC-TTSCEEEEEEEECCSCCSSCEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC-----CCeEEEEEecCCC-ccccceeEEeeecccccccceEEE
Confidence 66666655433321111111222 2 345556655 3467777763111 011234555444432 11111222
Q ss_pred E-ECCEEEEEcCCCC
Q 016201 280 V-FNDRLFVVGGQEG 293 (393)
Q Consensus 280 ~-~~~~iyv~GG~~~ 293 (393)
. ..+.+++.||.++
T Consensus 257 ~~s~~~~l~s~~~dg 271 (330)
T 2hes_X 257 AWGFNGLIASVGADG 271 (330)
T ss_dssp EECTTSCEEEEETTS
T ss_pred EEcCCCEEEEEeCCC
Confidence 2 2445666777654
No 42
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.26 E-value=0.26 Score=44.46 Aligned_cols=101 Identities=7% Similarity=0.008 Sum_probs=48.1
Q ss_pred cceeeccCCCCCeEEcCCCCccccC-ccEEEE-CC-EEEEEecCCCCCCccceEEEEECC-CCceEeCCCCCC----CC-
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLD-GAAIQI-KN-LFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPK----DM- 167 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~----~~- 167 (393)
..++.|+....+++.+......... ..++.. ++ .||+.+..+ ..+.+||+. +.+.+.+..++. |.
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 3678888766666655443222222 223322 34 577665322 346677764 333333322111 00
Q ss_pred ---CcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCC-CCCeEe
Q 016201 168 ---AHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE-TRKWDS 211 (393)
Q Consensus 168 ---~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~W~~ 211 (393)
....+.++. -++++|+.+. ....+..||.. +.+...
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~--------~~~~v~~~~~~~~g~~~~ 177 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDL--------GSDKVYVYNVSDAGQLSE 177 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEET--------TTTEEEEEEECTTSCEEE
T ss_pred cccCCCceEEEECCCCcEEEEeC--------CCCEEEEEEECCCCcEEE
Confidence 011222333 3566777652 13568888887 455543
No 43
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.20 E-value=0.55 Score=44.21 Aligned_cols=94 Identities=11% Similarity=0.065 Sum_probs=46.5
Q ss_pred eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEeeeec
Q 016201 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKD 255 (393)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~d 255 (393)
.++.+++.|+.+ ..+..||..+.+-...-... ...-.+++.. ++..++.|+.+ ..+..|++
T Consensus 278 ~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~---- 339 (464)
T 3v7d_B 278 GHGNIVVSGSYD--------NTLIVWDVAQMKCLYILSGH-TDRIYSTIYDHERKRCISASMD-----TTIRIWDL---- 339 (464)
T ss_dssp EETTEEEEEETT--------SCEEEEETTTTEEEEEECCC-SSCEEEEEEETTTTEEEEEETT-----SCEEEEET----
T ss_pred CCCCEEEEEeCC--------CeEEEEECCCCcEEEEecCC-CCCEEEEEEcCCCCEEEEEeCC-----CcEEEEEC----
Confidence 344555666532 34888998765532211111 1111122222 45566666653 45667764
Q ss_pred cccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCC
Q 016201 256 GKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293 (393)
Q Consensus 256 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~ 293 (393)
.+. +.+..+........++..++..++.|+.++
T Consensus 340 ---~~~--~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg 372 (464)
T 3v7d_B 340 ---ENG--ELMYTLQGHTALVGLLRLSDKFLVSAAADG 372 (464)
T ss_dssp ---TTT--EEEEEECCCSSCEEEEEECSSEEEEEETTS
T ss_pred ---CCC--cEEEEEeCCCCcEEEEEEcCCEEEEEeCCC
Confidence 222 222222222223355666788888887765
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.18 E-value=0.049 Score=49.90 Aligned_cols=151 Identities=7% Similarity=0.044 Sum_probs=66.9
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCC-eE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLE-WE 110 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-W~ 110 (393)
++.+++.|+. ++ .+..||+.+..|..+..+.... .....+....+............+..+|..+.. |.
T Consensus 22 ~g~~l~~~~~-d~-------~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTA-TN-------QVELYEQDGNGWKHARTFSDHD--KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCS-SS-------CBCEEEEETTEEEECCCBCCCS--SCEEEEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred CCCEEEEecC-CC-------EEEEEEccCCceEEEEEEecCC--ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 4567777776 66 6788998888777766654321 111122222221111111122357777766654 33
Q ss_pred EcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCc-eEeCCCCCCCCCcceeEEEE-eCCEEEEEec
Q 016201 111 QMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVS-DGRYIYIVSG 186 (393)
Q Consensus 111 ~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG 186 (393)
....+.........+.+ ++++++.|+.++ .+.+||+.+.+ |..+..+..+....-.+++. -++++++.|+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 22222211111112222 456777777543 47778877654 43333333211122223333 2566777776
Q ss_pred eeCCCCCCCCCeeEEEeCCC
Q 016201 187 QYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~ 206 (393)
.+ ..+..||..+
T Consensus 166 ~d--------~~i~iwd~~~ 177 (377)
T 3dwl_C 166 AD--------RKAYVLSAYV 177 (377)
T ss_dssp SS--------SCEEEEEECC
T ss_pred CC--------CEEEEEEEEe
Confidence 43 3367777653
No 45
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.18 E-value=0.086 Score=47.88 Aligned_cols=140 Identities=14% Similarity=0.224 Sum_probs=72.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++++++|+.+ ..+.+||+.+.+++.+..+.... ..-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTCGTD--------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEEETT--------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCCC-CcccEEEEeCCCCEEEEEcCC--------CeEEEEECCC
Confidence 55677777654 45888999888776655443211 11222333 356666776532 3478888888
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCC-CCceeEEEE--
Q 016201 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRG-GPHRACFVF-- 281 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~-~~~~~~~~~-- 281 (393)
.++.....+.........+.+ ++++++.|+.+ ..+..|++. ....|......... ......+.+
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~------~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFE------QENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEE------TTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEec------CCCcceeeeeeecccCCCeeEEEEcC
Confidence 776554322211122222222 55666676653 456677762 33334333222111 111222232
Q ss_pred CCEEEEEcCCCC
Q 016201 282 NDRLFVVGGQEG 293 (393)
Q Consensus 282 ~~~iyv~GG~~~ 293 (393)
+++.++.|+.++
T Consensus 153 ~~~~l~~~~~dg 164 (372)
T 1k8k_C 153 NSVLLAAGSCDF 164 (372)
T ss_dssp TSSEEEEEETTS
T ss_pred CCCEEEEEcCCC
Confidence 666777777654
No 46
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.07 E-value=0.056 Score=49.26 Aligned_cols=141 Identities=9% Similarity=0.172 Sum_probs=70.1
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++++++.||.++ .+.++|..+++|.....+...-...-.+++. -+++.++.|+.++ .+..||..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEccC
Confidence 567778888653 4777888888775432221110111222332 3566777776433 366677766
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE--C
Q 016201 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--N 282 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~--~ 282 (393)
..++.+..+......-..+.. ++++++.|+.+ ..+..|++. ....+..+..+.........+.. +
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~------~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVD------EEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEEC------TTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECC------CCCCeEEEEEecCcCCCeEEEEECCC
Confidence 665544333221111122222 56677777664 467777762 23333333322221211222222 5
Q ss_pred CEEEEEcCCCC
Q 016201 283 DRLFVVGGQEG 293 (393)
Q Consensus 283 ~~iyv~GG~~~ 293 (393)
+++++.|+.++
T Consensus 162 ~~~l~s~s~d~ 172 (345)
T 3fm0_A 162 QELLASASYDD 172 (345)
T ss_dssp SSCEEEEETTS
T ss_pred CCEEEEEeCCC
Confidence 66777777664
No 47
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.04 E-value=0.079 Score=54.08 Aligned_cols=172 Identities=9% Similarity=0.050 Sum_probs=84.7
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--C--CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 173 (393)
.+..+|....++..+..+......-..+.+ + +..++.|+.++ .+.+||+.+++|..+..+.... ..-.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h~-~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGRWSQIAVHAVHS-ASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEETTEEEEEEEECCCS-SCEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCCCcccccccccCCC-CCeEE
Confidence 566666655555555444332222222333 2 66777787653 4788898888877665443311 22223
Q ss_pred EEEe-C--CEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCc-eEEEE--------------CCEEEEEc
Q 016201 174 VVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP-ATQLW--------------RGRLHVMG 235 (393)
Q Consensus 174 ~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~--------------~~~iyv~G 235 (393)
++.. + +.+++.|+.+ ..+..||..+..-.....+....... ++... ++.+++.|
T Consensus 105 v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred EEECCCCCCCEEEEEeCC--------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence 3332 3 5677777532 34777887765211111000001111 11111 35667777
Q ss_pred cCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE--C---CEEEEEcCCCCC
Q 016201 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--N---DRLFVVGGQEGD 294 (393)
Q Consensus 236 G~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~--~---~~iyv~GG~~~~ 294 (393)
+.+ ..+..|++. .....+.....+........++.. + +++++.||.++.
T Consensus 177 s~d-----g~I~iwd~~-----~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 177 GAD-----NLVKIWKYN-----SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp ETT-----SCEEEEEEE-----TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred ECC-----CeEEEEecc-----CCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 653 456777752 223334444333322222233333 4 788888887653
No 48
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.95 E-value=0.37 Score=41.52 Aligned_cols=173 Identities=15% Similarity=0.090 Sum_probs=79.6
Q ss_pred ccEEEE-ecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeE
Q 016201 32 ADFMWA-SSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWE 110 (393)
Q Consensus 32 ~~~ly~-~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 110 (393)
++.||+ .... .+ .+.+||+.+......+.... ....++++-.+...-.... +..+..+|+......
T Consensus 34 ~g~l~v~~~~~-~~-------~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 34 AGNVYVTSEGM-YG-------RVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp TCCEEEEECSS-SC-------EEEEECC-----EECCCCSC----CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CCCEEEEccCC-CC-------cEEEecCCCcccceEeeCCc----CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 457888 4333 33 57778876655443322110 1122333322211111111 347888888776544
Q ss_pred EcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEecee
Q 016201 111 QMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQY 188 (393)
Q Consensus 111 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~ 188 (393)
...... ...-.+++.. +++||+.... ...+.+++..+........... ....+++.. ++++|+....
T Consensus 101 ~~~~~~-~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~- 169 (270)
T 1rwi_B 101 VLPFDG-LNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL---NDPDGVAVDNSGNVYVTDTD- 169 (270)
T ss_dssp ECCCCS-CSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC---CSCCCEEECTTCCEEEEEGG-
T ss_pred eeecCC-cCCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccC---CCceeEEEeCCCCEEEEECC-
Confidence 432211 0111223332 5678887542 2458888877665443321111 111233333 5779887532
Q ss_pred CCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016201 189 GPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (393)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (393)
...+.+||+.+..-........ ..-..+++. ++.||+...
T Consensus 170 -------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 170 -------NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp -------GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET
T ss_pred -------CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC
Confidence 3468899988766443321111 111123332 457888753
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.93 E-value=0.15 Score=47.58 Aligned_cols=159 Identities=7% Similarity=-0.005 Sum_probs=73.3
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCcccc-ccceeEEecCCcchhhHHhhcceeeccCCCCCeE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDR-QRESVAVIDKKGQDAERFLSATFADLPAPDLEWE 110 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 110 (393)
++.+++.++. ++ .+..||+.+..............+. ...+++...+...-........+..+|..+.+-.
T Consensus 133 ~~~~~~~~~~-~~-------~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 133 NTRLAIPLLE-DE-------GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK 204 (433)
T ss_dssp SSEEEEEBTT-SS-------SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred CCeEEEEeCC-CC-------eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE
Confidence 5677777765 44 5888998877665433221100001 1111222111111111112336778887665432
Q ss_pred EcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEece
Q 016201 111 QMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQ 187 (393)
Q Consensus 111 ~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~ 187 (393)
..-... ...-.+++.. +..+|+.++.+ ..+.+||+.+.+.... ++.. ..-.+++. -+++.+++++.
T Consensus 205 ~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~--~~~~--~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 205 ATVDLT-GKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRK--TDKI--GLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEEECS-SSSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEE--CCCC--SEEEEEEECTTSSEEEEEEE
T ss_pred EEEcCC-CCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEE--ecCC--CCceEEEEcCCCCEEEEEEC
Confidence 211111 0011122222 44677776543 3589999988765443 2221 11223333 24544444444
Q ss_pred eCCCCCCCCCeeEEEeCCCCCe
Q 016201 188 YGPQCRGPTSRTFVLDSETRKW 209 (393)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~~~~W 209 (393)
...........+..||+.+.+-
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEE
T ss_pred CCCccccCCCeEEEEECCCCcE
Confidence 3321101235788999987754
No 50
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.15 Score=47.12 Aligned_cols=64 Identities=9% Similarity=0.076 Sum_probs=32.6
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
.+..+++|+.+ ..+..||+.+.+-... +... ...-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 216 ~~~~~~~~~~~------g~i~~~d~~~~~~~~~--~~~~-~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~ 278 (425)
T 1r5m_A 216 DDDKFVIPGPK------GAIFVYQITEKTPTGK--LIGH-HGPISVLEFNDTNKLLLSASDD--------GTLRIWHGGN 278 (425)
T ss_dssp ETTEEEEECGG------GCEEEEETTCSSCSEE--ECCC-SSCEEEEEEETTTTEEEEEETT--------SCEEEECSSS
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCceeee--eccC-CCceEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 33446666654 4588899887642211 1111 011222332 355566666532 3477888776
Q ss_pred CC
Q 016201 207 RK 208 (393)
Q Consensus 207 ~~ 208 (393)
.+
T Consensus 279 ~~ 280 (425)
T 1r5m_A 279 GN 280 (425)
T ss_dssp BS
T ss_pred Cc
Confidence 54
No 51
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.1 Score=53.27 Aligned_cols=108 Identities=15% Similarity=0.084 Sum_probs=57.5
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecC--CcchhhHHhhcceeeccCCCCCe
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDK--KGQDAERFLSATFADLPAPDLEW 109 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W 109 (393)
++.+++.|+. +| .+..||..+.++..+..+... .....+++...+ ............+..+|..+.+|
T Consensus 20 dg~~latg~~-dg-------~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSS-DK-------TIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEET-TT-------EEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred CCCeEEEEEC-CC-------cEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 4556777777 66 788899877777666554332 011122222221 11111111233677777777766
Q ss_pred EEcCCCCccccCccEEEE--C--CEEEEEecCCCCCCccceEEEEECCCC
Q 016201 110 EQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDN 155 (393)
Q Consensus 110 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~~~ 155 (393)
..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+.
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~ 133 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKEN 133 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSS
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecC
Confidence 555444333223223333 2 5677778765 35788888766
No 52
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.75 E-value=0.21 Score=46.52 Aligned_cols=97 Identities=12% Similarity=0.050 Sum_probs=53.7
Q ss_pred ceeeccCCCCCeEEcCCCCcc-cc--CccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCccee
Q 016201 98 TFADLPAPDLEWEQMPSAPVP-RL--DGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~-r~--~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~ 172 (393)
.+..+|..+.+.......... .. ....+.+ ++++|+.++.+ ..+.+||+.+.+-...-.... ..-.
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~~---~~~~ 215 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLTG---KWSK 215 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECSS---SSEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCCC---CCee
Confidence 588888887766554332211 11 1112233 67888888754 468899998765432211111 1122
Q ss_pred EEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEe
Q 016201 173 GVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS 211 (393)
Q Consensus 173 ~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~ 211 (393)
+++. .+..+|+.++. ...+.+||+.+.+...
T Consensus 216 ~~~~~~~~~~l~~~~~~--------~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWI--------SEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEETTTTEEEEEETT--------TTEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEecC--------CCcEEEEECCCCcEEE
Confidence 2333 35567777642 3468999998876543
No 53
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.72 E-value=0.44 Score=41.79 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=59.2
Q ss_pred eeEEEEeC-CEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCccee
Q 016201 171 HLGVVSDG-RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (393)
Q Consensus 171 ~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 249 (393)
-++++..+ +.+|+..|..+ .+.+..+|+.+.+=...-+++.......++..+++||+..-. .+.+.++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~vi 91 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIY 91 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEE
T ss_pred cccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEE
Confidence 34566655 89999876322 467999999998754433344333445677778999999643 2344444
Q ss_pred EeeeeccccccCCeEEeccCCCC-CCceeEEEECCEEEEEcC
Q 016201 250 SIAVKDGKALEKAWRTEIPIPRG-GPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 250 ~~~~~d~~~~~~~W~~~~~~p~~-~~~~~~~~~~~~iyv~GG 290 (393)
| +. +.+.+..+|.+ ..+.+.+.-++++|+.-|
T Consensus 92 D-------~~--t~~v~~~i~~g~~~g~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 92 D-------RR--TLSNIKNFTHQMKDGWGLATDGKILYGSDG 124 (266)
T ss_dssp E-------TT--TTEEEEEEECCSSSCCEEEECSSSEEEECS
T ss_pred E-------CC--CCcEEEEEECCCCCeEEEEECCCEEEEECC
Confidence 4 23 33333333322 333355554667888754
No 54
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.71 E-value=0.081 Score=48.66 Aligned_cols=146 Identities=14% Similarity=0.109 Sum_probs=73.7
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcch-hhHHhhcceeeccCCCCCeE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQD-AERFLSATFADLPAPDLEWE 110 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~W~ 110 (393)
+.+||+.|+. ++ .+..||+.+.+-...-..... ..+++...+.... ........+..+|..+.+-.
T Consensus 43 g~~l~~~~~~-d~-------~i~v~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 43 GTKVYVANAH-SN-------DVSIIDTATNNVIATVPAGSS-----PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp SSEEEEEEGG-GT-------EEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEECCC-CC-------eEEEEECCCCeEEEEEECCCC-----ccceEECCCCCEEEEEECCCCEEEEEECCCCeEE
Confidence 3457777765 45 788899877665432222111 1122222111100 01112236888888776543
Q ss_pred EcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe--CCEEEEEec
Q 016201 111 QMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSG 186 (393)
Q Consensus 111 ~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG 186 (393)
..... ...-.+++.. +..||+.++.+ ..+.+||+.+.+....-.... ....++.. ++.+|+.++
T Consensus 110 ~~~~~--~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~dg~~l~~~~~ 177 (391)
T 1l0q_A 110 GTVKT--GKSPLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVGR----SPKGIAVTPDGTKVYVANF 177 (391)
T ss_dssp EEEEC--SSSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECCS----SEEEEEECTTSSEEEEEET
T ss_pred EEEeC--CCCcceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecCC----CcceEEECCCCCEEEEEeC
Confidence 22111 1111222222 34577777643 468999998887654332222 11233332 456777764
Q ss_pred eeCCCCCCCCCeeEEEeCCCCCeE
Q 016201 187 QYGPQCRGPTSRTFVLDSETRKWD 210 (393)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~~~W~ 210 (393)
. ...+..||+.+.+-.
T Consensus 178 ~--------~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 178 D--------SMSISVIDTVTNSVI 193 (391)
T ss_dssp T--------TTEEEEEETTTTEEE
T ss_pred C--------CCEEEEEECCCCeEE
Confidence 2 355899999887543
No 55
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.70 E-value=0.55 Score=42.34 Aligned_cols=99 Identities=6% Similarity=0.110 Sum_probs=49.4
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++ ++.|+.+ ..+..||+.+.+-... +... ...-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 154 ~~~-l~s~s~d------~~i~~wd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~ 215 (340)
T 1got_B 154 DNQ-IVTSSGD------TTCALWDIETGQQTTT--FTGH-TGDVMSLSLAPDTRLFVSGACD--------ASAKLWDVRE 215 (340)
T ss_dssp TTE-EEEEETT------SCEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCc-EEEEECC------CcEEEEECCCCcEEEE--EcCC-CCceEEEEECCCCCEEEEEeCC--------CcEEEEECCC
Confidence 455 4555544 3478899887764321 2111 011222333 356677777643 3477888876
Q ss_pred CCeEeCCCCCCCCCCc-eEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 207 RKWDSIPPLPSPRYSP-ATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..-... +......- +++.. ++.+++.|+.+ ..+..|++
T Consensus 216 ~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~ 255 (340)
T 1got_B 216 GMCRQT--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDL 255 (340)
T ss_dssp CSEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEEC
Confidence 543221 11111111 12222 56677777754 45667764
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.58 E-value=1.3 Score=40.50 Aligned_cols=106 Identities=10% Similarity=0.119 Sum_probs=51.7
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCC---CcceeEEEEe-C-CEEEEEeceeCCCCCCCCCeeEEEe
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM---AHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLD 203 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~---~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd 203 (393)
+.+++.|+.+ ..+.+||+.+.+-...-..+.+. ...-.+++.. + ..+++.|+.++. ...+..||
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~~~i~~~d 246 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-----DPSILIWD 246 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-----SCCCCEEE
T ss_pred CcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-----CceEEEEe
Confidence 5677887765 34888999887644332222100 1112233333 2 357777764431 12577888
Q ss_pred CCCCCeEeCCCCC-CCCCCceEEEE---CCEEEEEccCCCCCCCCCcceeEe
Q 016201 204 SETRKWDSIPPLP-SPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 204 ~~~~~W~~~~~~p-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..+.. ..+..+. ........+.. ++.+++.|+.+ ..+..|++
T Consensus 247 ~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-----g~v~~wd~ 292 (416)
T 2pm9_A 247 LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-----NTVLLWNP 292 (416)
T ss_dssp TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-----SEEEEECS
T ss_pred CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-----CCEEEeeC
Confidence 87643 1111122 11111122222 56677777653 34556654
No 57
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.58 E-value=0.36 Score=42.71 Aligned_cols=101 Identities=12% Similarity=0.114 Sum_probs=50.6
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
++++++.|+.+ ..+.+||+.+.+-... +.............-++.+++.|+.+ ..+..||..+.
T Consensus 76 ~~~~l~s~~~d------~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~ 139 (312)
T 4ery_A 76 DSNLLVSASDD------KTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVKTG 139 (312)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT--------SCEEEEETTTC
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECCCC
Confidence 56677777765 3588899887653221 11100111111222355666776543 34788898876
Q ss_pred CeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 208 KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+-... ++........+.. ++++++.|+.+ ..+..|++
T Consensus 140 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~ 178 (312)
T 4ery_A 140 KCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDT 178 (312)
T ss_dssp CEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred EEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEEC
Confidence 53221 1111111122222 55677777654 35666664
No 58
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.57 E-value=0.94 Score=38.87 Aligned_cols=119 Identities=12% Similarity=0.005 Sum_probs=58.5
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 176 (393)
.+..++..+.......... ...-.+++.. ++.||+... + ..+.+||+.+.....+..... ....+++.
T Consensus 47 ~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~-~------~~i~~~d~~~~~~~~~~~~~~---~~p~~i~~ 115 (270)
T 1rwi_B 47 RVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDF-N------NRVVTLAAGSNNQTVLPFDGL---NYPEGLAV 115 (270)
T ss_dssp EEEEECC-----EECCCCS-CCSCCCEEECTTCCEEEEET-T------TEEEEECTTCSCCEECCCCSC---SSEEEEEE
T ss_pred cEEEecCCCcccceEeeCC-cCCcceeEECCCCCEEEEcC-C------CEEEEEeCCCceEeeeecCCc---CCCcceEE
Confidence 5666776554433332111 1112233333 567888765 2 358899998876554432111 12234444
Q ss_pred e-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016201 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (393)
Q Consensus 177 ~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (393)
. ++++|+.... ...+.+||..+........... ..-..+++. +++||+...
T Consensus 116 ~~~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 116 DTQGAVYVADRG--------NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CTTCCEEEEEGG--------GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEG
T ss_pred CCCCCEEEEECC--------CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEEC
Confidence 3 6789987532 3458888877665543322111 111233333 567888753
No 59
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.52 E-value=0.12 Score=44.78 Aligned_cols=145 Identities=7% Similarity=-0.104 Sum_probs=72.4
Q ss_pred ceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCC-CCeEEcCCCCcccc-CccEEEEC
Q 016201 51 SVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPD-LEWEQMPSAPVPRL-DGAAIQIK 128 (393)
Q Consensus 51 ~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~W~~~~~~~~~r~-~~~~~~~~ 128 (393)
..+..||+.+.....+...... ..++....+...... .....++.+|..+ .+...+...+.... ......-+
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPEL-----FEAPNWSPDGKYLLL-NSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSC-----CEEEEECTTSSEEEE-EETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred eeEEEEeCCCCceeeeccCCcc-----eEeeEECCCCCEEEE-EcCCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 4788888887776554432211 111111111100000 0133788888887 76666554332111 12222235
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCC-EEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR-YIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++.+++++..... ...++.++..+.+-..+..... ...++. -++ .|++.++.++ ...++.+|..+
T Consensus 96 g~~l~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~~~------~~~l~~~~~~~ 162 (297)
T 2ojh_A 96 GALYAISDKVEFG--KSAIYLLPSTGGTPRLMTKNLP-----SYWHGWSPDGKSFTYCGIRDQ------VFDIYSMDIDS 162 (297)
T ss_dssp SSEEEEEECTTTS--SCEEEEEETTCCCCEECCSSSS-----EEEEEECTTSSEEEEEEEETT------EEEEEEEETTT
T ss_pred CCEEEEEEeCCCC--cceEEEEECCCCceEEeecCCC-----ccceEECCCCCEEEEEECCCC------ceEEEEEECCC
Confidence 6656665533222 3578999988877555543221 222222 244 4555554322 34678888887
Q ss_pred CCeEeCCC
Q 016201 207 RKWDSIPP 214 (393)
Q Consensus 207 ~~W~~~~~ 214 (393)
.....+..
T Consensus 163 ~~~~~~~~ 170 (297)
T 2ojh_A 163 GVETRLTH 170 (297)
T ss_dssp CCEEECCC
T ss_pred CcceEccc
Confidence 77766654
No 60
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.40 E-value=0.72 Score=40.33 Aligned_cols=25 Identities=20% Similarity=0.182 Sum_probs=17.0
Q ss_pred hccEEEEecCCCCCCCCcccceeeeeecCCCce
Q 016201 31 IADFMWASSSSSFSSSSAHLSVASNWALEKSGV 63 (393)
Q Consensus 31 ~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W 63 (393)
.++.+++.|+. ++ .+..||..+..-
T Consensus 27 ~~~~~l~s~~~-dg-------~v~vw~~~~~~~ 51 (313)
T 3odt_A 27 VDDSKVASVSR-DG-------TVRLWSKDDQWL 51 (313)
T ss_dssp EETTEEEEEET-TS-------EEEEEEESSSEE
T ss_pred cCCCEEEEEEc-CC-------cEEEEECCCCEE
Confidence 35556777777 66 788888766543
No 61
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.33 E-value=1.4 Score=38.85 Aligned_cols=65 Identities=11% Similarity=0.172 Sum_probs=36.0
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++.+++.|+.++ .+.+||+.+.+-.. .++... ..-.+++. .++.+++.|+.+ ..+..||..+
T Consensus 118 ~~~~l~s~~~d~------~i~iwd~~~~~~~~--~~~~~~-~~v~~~~~~~~~~~l~~~~~d--------~~i~~wd~~~ 180 (312)
T 4ery_A 118 QSNLIVSGSFDE------SVRIWDVKTGKCLK--TLPAHS-DPVSAVHFNRDGSLIVSSSYD--------GLCRIWDTAS 180 (312)
T ss_dssp SSSEEEEEETTS------CEEEEETTTCCEEE--EECCCS-SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCEEEE--EecCCC-CcEEEEEEcCCCCEEEEEeCC--------CcEEEEECCC
Confidence 456777777653 47889988765322 122110 11122222 356677777543 3478899887
Q ss_pred CCe
Q 016201 207 RKW 209 (393)
Q Consensus 207 ~~W 209 (393)
.+-
T Consensus 181 ~~~ 183 (312)
T 4ery_A 181 GQC 183 (312)
T ss_dssp CCE
T ss_pred Cce
Confidence 654
No 62
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.29 E-value=0.89 Score=40.98 Aligned_cols=203 Identities=11% Similarity=0.084 Sum_probs=99.9
Q ss_pred ceeeccCCCCCeEEcCCC-Cccc-cCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCC-CCCCcceeEE
Q 016201 98 TFADLPAPDLEWEQMPSA-PVPR-LDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGV 174 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~-~~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~r~~~~~ 174 (393)
.+++..-...+|+.+... +.+. ...++....+.+|++|.. ..+++-+=..++|+.+.... .|. . ...+
T Consensus 57 ~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~~-~-~~~i 127 (327)
T 2xbg_A 57 TLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLPG-S-PRLI 127 (327)
T ss_dssp EEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCSS-C-EEEE
T ss_pred eEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCCC-C-eEEE
Confidence 355554445689998642 2222 223444456788887632 12444333467999976432 121 1 2233
Q ss_pred E-EeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEee
Q 016201 175 V-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIA 252 (393)
Q Consensus 175 ~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 252 (393)
+ .-++.+|+.|.. ..+++-+-.-.+|+.+... .+...+.++.. ++.+|++| ..+ ..|...
T Consensus 128 ~~~~~~~~~~~~~~---------g~v~~S~DgG~tW~~~~~~-~~~~~~~~~~~~~~~~~~~g-~~G-------~~~~S~ 189 (327)
T 2xbg_A 128 KALGNGSAEMITNV---------GAIYRTKDSGKNWQALVQE-AIGVMRNLNRSPSGEYVAVS-SRG-------SFYSTW 189 (327)
T ss_dssp EEEETTEEEEEETT---------CCEEEESSTTSSEEEEECS-CCCCEEEEEECTTSCEEEEE-TTS-------SEEEEE
T ss_pred EEECCCCEEEEeCC---------ccEEEEcCCCCCCEEeecC-CCcceEEEEEcCCCcEEEEE-CCC-------cEEEEe
Confidence 3 356888888731 1255544345689988642 22233333333 45666654 221 122210
Q ss_pred eeccccccCCeEEeccCCCCCCceeEEE-ECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC--CCCCeEEC
Q 016201 253 VKDGKALEKAWRTEIPIPRGGPHRACFV-FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD--DEMKWKVL 329 (393)
Q Consensus 253 ~~d~~~~~~~W~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd--~~~~W~~~ 329 (393)
|....+|+.+...... ....++. -++.+|+.+.. + .++..+ ...+|+.+
T Consensus 190 ----d~gG~tW~~~~~~~~~-~~~~~~~~~~g~~~~~~~~-G----------------------~~~~s~~D~G~tW~~~ 241 (327)
T 2xbg_A 190 ----EPGQTAWEPHNRTTSR-RLHNMGFTPDGRLWMIVNG-G----------------------KIAFSDPDNSENWGEL 241 (327)
T ss_dssp ----CTTCSSCEEEECCSSS-CEEEEEECTTSCEEEEETT-T----------------------EEEEEETTEEEEECCC
T ss_pred ----CCCCCceeECCCCCCC-ccceeEECCCCCEEEEeCC-c----------------------eEEEecCCCCCeeEec
Confidence 0125789887532222 2223332 36778877642 2 155552 24589876
Q ss_pred CCCCCCCCCcceeEEEE-CCEEEEEcC
Q 016201 330 PPMPKPNSHIECAWVIV-NNSIIITGG 355 (393)
Q Consensus 330 ~~~~~~r~~~~~~~~~~-~~~i~v~GG 355 (393)
...+.+....-..++.. ++++|+.|+
T Consensus 242 ~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 242 LSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp BCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred cCCcccCCcceEEEEecCCCEEEEEeC
Confidence 53212221111222222 678888876
No 63
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.22 E-value=1.6 Score=38.94 Aligned_cols=97 Identities=15% Similarity=0.045 Sum_probs=51.1
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-C-CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCC------Cc
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-K-NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM------AH 169 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~------~r 169 (393)
.++.+|..+.+-...-+. ...-..++.. + +.+|+.+..+ ..+.++|+.+.+-...-+++... +.
T Consensus 70 ~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 141 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVN------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPL 141 (353)
T ss_dssp EEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEEESCCCCCCSSCCCC
T ss_pred cEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCC------CEEEEEeCCCCeeEEEEecCCCccccccCCC
Confidence 688888877653322211 1122333333 3 4588876643 36899999887643222221110 01
Q ss_pred ceeEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCe
Q 016201 170 SHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (393)
Q Consensus 170 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (393)
....++. .++.+|+.+... ...++.||+.+.+-
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKL 176 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEE
T ss_pred CCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCce
Confidence 1223333 356778776211 34589999987654
No 64
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.22 E-value=0.48 Score=41.66 Aligned_cols=234 Identities=9% Similarity=-0.013 Sum_probs=109.1
Q ss_pred ceeeccCCCC--CeEEcCCCCccccCccEEE-ECCEEEEEecCCCCCCccceEEEEECCCC-ceEeCCCCCCCCCcceeE
Q 016201 98 TFADLPAPDL--EWEQMPSAPVPRLDGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~--~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~~ 173 (393)
.+..+|..+. .|+.-..-. ...+.+.. -+++||+.+. ..+.+||+..+ .|+.-. +... .....
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~--~~~~~~~~~pdG~ilvs~~--------~~V~~~d~~G~~~W~~~~--~~~~-~~~~~ 82 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKG--WECNSVAATKAGEILFSYS--------KGAKMITRDGRELWNIAA--PAGC-EMQTA 82 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTT--CCCCEEEECTTSCEEEECB--------SEEEEECTTSCEEEEEEC--CTTC-EEEEE
T ss_pred EEEEEECCCCeEEEEeCCCcc--CCCcCeEECCCCCEEEeCC--------CCEEEECCCCCEEEEEcC--CCCc-ccccc
Confidence 5666776554 465433211 11233333 3777888321 35889998432 366433 2110 11223
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC-eEeC-C-CCCCC--CCCceEEEECCEEEEEccCCCCCCCCCcce
Q 016201 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK-WDSI-P-PLPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEH 248 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~-~-~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 248 (393)
....++++++....+ ...++.+|+.... |+.. . ..+.+ .........++.+++.... ...+.+
T Consensus 83 ~~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----~~~v~~ 150 (276)
T 3no2_A 83 RILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----TSEVRE 150 (276)
T ss_dssp EECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----TTEEEE
T ss_pred EECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-----CCEEEE
Confidence 334467776664310 2457788875442 4321 1 11111 1112233345666655432 123333
Q ss_pred eEeeeeccccccCCeEEeccCCCCCCceeEEE-ECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeCCC--C-
Q 016201 249 WSIAVKDGKALEKAWRTEIPIPRGGPHRACFV-FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLDDE--M- 324 (393)
Q Consensus 249 ~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~--~- 324 (393)
|+ .+ ....|+.-.+. ..+++.. .++.+++.+..++ .++.+|+. +
T Consensus 151 ~d-----~~-G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~~----------------------~v~~~d~~tG~~ 198 (276)
T 3no2_A 151 IA-----PN-GQLLNSVKLSG----TPFSSAFLDNGDCLVACGDAH----------------------CFVQLNLESNRI 198 (276)
T ss_dssp EC-----TT-SCEEEEEECSS----CCCEEEECTTSCEEEECBTTS----------------------EEEEECTTTCCE
T ss_pred EC-----CC-CCEEEEEECCC----CccceeEcCCCCEEEEeCCCC----------------------eEEEEeCcCCcE
Confidence 33 22 34456654321 1123333 4788888876542 28899944 3
Q ss_pred CeEECC-CCCCCCC-CcceeEEEECCEEEEEc--CcCCCC-C-cccceEEEEEEEeecCC-CccccccccccCCC
Q 016201 325 KWKVLP-PMPKPNS-HIECAWVIVNNSIIITG--GTTEKH-P-MTKRMILVGEVFQFHLD-SLPSLQSRFWGSHA 392 (393)
Q Consensus 325 ~W~~~~-~~~~~r~-~~~~~~~~~~~~i~v~G--G~~~~~-~-~~~~~~~~~~~y~~~~~-~W~~~~~~~~~~~~ 392 (393)
.|+.-. .++..+. .........+|.+|+.. |..... . .... +..++++.+ .|+.-....+++.+
T Consensus 199 ~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~----~~~~~~~g~~~W~~~~~~~~~~~~ 269 (276)
T 3no2_A 199 VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQ----LVEIDSEGKVVWQLNDKVKFGMIS 269 (276)
T ss_dssp EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCS----EEEECTTSBEEEEECCTTTSCCCC
T ss_pred EEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCce----EEEECCCCCEEEEecCccccccee
Confidence 787642 2222222 12222244588999886 432100 0 0111 122343333 38777777777654
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.17 E-value=0.25 Score=45.00 Aligned_cols=134 Identities=11% Similarity=0.000 Sum_probs=62.4
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCc-eEeCCCCCCCCCcceeEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~~ 174 (393)
.+..+|..+..|+.+..+......-..+.+ ++++++.|+.++ .+.+||+.+.+ |.....+... ...-.++
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~-~~~v~~~ 106 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRL-NRAATFV 106 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCC-SSCEEEE
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEeccc-CCceEEE
Confidence 566677767777776666543333222333 456777777553 47888888776 5443333221 1112223
Q ss_pred EE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC-eEeCCCCCC--CCCCceEEEE-CCEEEEEccCCCCCCCCCccee
Q 016201 175 VS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK-WDSIPPLPS--PRYSPATQLW-RGRLHVMGGSKENRHTPGLEHW 249 (393)
Q Consensus 175 ~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~p~--~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 249 (393)
+. -++++++.|+.+ ..+..||..+.+ |..+..+.. ...-.+++.. ++++++.|+.+ ..+..|
T Consensus 107 ~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw 173 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-----RKAYVL 173 (377)
T ss_dssp ECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-----SCEEEE
T ss_pred EECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-----CEEEEE
Confidence 32 256666776543 236777777654 333332222 1111122222 55677777654 456667
Q ss_pred Ee
Q 016201 250 SI 251 (393)
Q Consensus 250 ~~ 251 (393)
++
T Consensus 174 d~ 175 (377)
T 3dwl_C 174 SA 175 (377)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 66
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.15 E-value=0.51 Score=42.32 Aligned_cols=100 Identities=7% Similarity=0.104 Sum_probs=52.1
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe-CCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++.++.|+.++ .+..||+.+.+-.. +.....+ .......-++++++.|+.+ ..+..||..+
T Consensus 175 dg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~~---v~~l~~spd~~~l~s~s~d--------g~i~iwd~~~ 237 (321)
T 3ow8_A 175 DGKYLASGAIDG------IINIFDIATGKLLHTLEGHAMP---IRSLTFSPDSQLLVTASDD--------GYIKIYDVQH 237 (321)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSC---CCEEEECTTSCEEEEECTT--------SCEEEEETTT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCCc---eeEEEEcCCCCEEEEEcCC--------CeEEEEECCC
Confidence 567777787653 47889988775322 2211111 1112222366777777543 3478888877
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
...... +......-..+.+ +++.++.|+.+ ..+..|++
T Consensus 238 ~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~ 277 (321)
T 3ow8_A 238 ANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDV 277 (321)
T ss_dssp CCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred cceeEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeC
Confidence 654321 1111111112222 56667777653 46777774
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.14 E-value=2.1 Score=40.02 Aligned_cols=132 Identities=11% Similarity=0.099 Sum_probs=66.3
Q ss_pred ECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 127 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
.++.+++.|+.++ .+.+||+.+.+-... +.... ..-.+++. .++..++.|+.+ ..+..||..
T Consensus 278 ~~~~~l~~~~~d~------~i~vwd~~~~~~~~~--~~~~~-~~v~~~~~~~~~~~l~sg~~d--------g~i~vwd~~ 340 (464)
T 3v7d_B 278 GHGNIVVSGSYDN------TLIVWDVAQMKCLYI--LSGHT-DRIYSTIYDHERKRCISASMD--------TTIRIWDLE 340 (464)
T ss_dssp EETTEEEEEETTS------CEEEEETTTTEEEEE--ECCCS-SCEEEEEEETTTTEEEEEETT--------SCEEEEETT
T ss_pred CCCCEEEEEeCCC------eEEEEECCCCcEEEE--ecCCC-CCEEEEEEcCCCCEEEEEeCC--------CcEEEEECC
Confidence 3455667777553 488899887653322 21111 11222333 355566666532 348889987
Q ss_pred CCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEECCEE
Q 016201 206 TRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRL 285 (393)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~i 285 (393)
+.+-. ..+.........+..++..++.|+.+ ..+..|++ .+..-..... ........+...++++
T Consensus 341 ~~~~~--~~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 341 NGELM--YTLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDA-------NDYSRKFSYH-HTNLSAITTFYVSDNI 405 (464)
T ss_dssp TTEEE--EEECCCSSCEEEEEECSSEEEEEETT-----SEEEEEET-------TTCCEEEEEE-CTTCCCEEEEEECSSE
T ss_pred CCcEE--EEEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEEC-------CCCceeeeec-CCCCccEEEEEeCCCE
Confidence 76432 22222222234445566777777664 35666764 2222111111 1122223455567888
Q ss_pred EEEcC
Q 016201 286 FVVGG 290 (393)
Q Consensus 286 yv~GG 290 (393)
++.|+
T Consensus 406 l~~~~ 410 (464)
T 3v7d_B 406 LVSGS 410 (464)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88776
No 68
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.14 E-value=0.24 Score=43.38 Aligned_cols=98 Identities=16% Similarity=0.098 Sum_probs=61.9
Q ss_pred ceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCccee
Q 016201 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (393)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 249 (393)
+..++...++.+|+..|..+ .+..+|+++.+=...- ++......+++..+++||+.... .+.+.+|
T Consensus 56 ftqGL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~ 121 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG--------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTW 121 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT--------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEE
T ss_pred ccceEEEECCEEEEEcCCCC--------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEE
Confidence 34566777999999988532 2888999988743322 44333445577889999999654 2344555
Q ss_pred EeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcC
Q 016201 250 SIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 250 ~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG 290 (393)
| +++ .+.+...+....+.+++.-++++|+.-|
T Consensus 122 D-------~~T--l~~~~ti~~~~eGwGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 122 S-------GMP--PQRERTTRYSGEGWGLCYWNGKLVRSDG 153 (268)
T ss_dssp E-------TTT--TEEEEEEECSSCCCCEEEETTEEEEECS
T ss_pred E-------CCc--CcEEEEEeCCCceeEEecCCCEEEEECC
Confidence 4 233 3333333333445577777888999875
No 69
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.09 E-value=0.43 Score=44.74 Aligned_cols=138 Identities=10% Similarity=0.065 Sum_probs=70.7
Q ss_pred EEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 125 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
...++..++.|+.+ ..+.+||..+.+-... +... .........++.+++.|+.+ ..+..||.
T Consensus 139 ~~~d~~~l~~g~~d------g~i~iwd~~~~~~~~~--~~~h--~~~v~~l~~~~~~l~sg~~d--------g~i~vwd~ 200 (435)
T 1p22_A 139 LQYDDQKIVSGLRD------NTIKIWDKNTLECKRI--LTGH--TGSVLCLQYDERVIITGSSD--------STVRVWDV 200 (435)
T ss_dssp EECCSSEEEEEESS------SCEEEEESSSCCEEEE--ECCC--SSCEEEEECCSSEEEEEETT--------SCEEEEES
T ss_pred EEECCCEEEEEeCC------CeEEEEeCCCCeEEEE--EcCC--CCcEEEEEECCCEEEEEcCC--------CeEEEEEC
Confidence 44477788888865 3488899877654332 2211 11222233477777777643 34788888
Q ss_pred CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEECCE
Q 016201 205 ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDR 284 (393)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 284 (393)
.+.+-... +.........+..++.+++.|+.+ ..+..|++. ..........+........++..+++
T Consensus 201 ~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~------~~~~~~~~~~~~~~~~~v~~~~~~~~ 267 (435)
T 1p22_A 201 NTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMA------SPTDITLRRVLVGHRAAVNVVDFDDK 267 (435)
T ss_dssp SSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT-----SCEEEEECS------SSSCCEEEEEECCCSSCEEEEEEETT
T ss_pred CCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCC------CCCCceeeeEecCCCCcEEEEEeCCC
Confidence 87654222 111122223334455566777653 466677751 11122111112222222234455777
Q ss_pred EEEEcCCCC
Q 016201 285 LFVVGGQEG 293 (393)
Q Consensus 285 iyv~GG~~~ 293 (393)
.++.|+.++
T Consensus 268 ~l~s~~~dg 276 (435)
T 1p22_A 268 YIVSASGDR 276 (435)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 777777654
No 70
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.08 E-value=0.17 Score=45.14 Aligned_cols=21 Identities=24% Similarity=0.210 Sum_probs=13.7
Q ss_pred cEEEEecCCCCCCCCcccceeeeeecCCC
Q 016201 33 DFMWASSSSSFSSSSAHLSVASNWALEKS 61 (393)
Q Consensus 33 ~~ly~~GG~~~g~~~~~~~~~~~~d~~~~ 61 (393)
+.+.+.||. |+ .+..||+.+.
T Consensus 51 ~~~l~S~s~-D~-------~i~vWd~~~~ 71 (340)
T 4aow_A 51 PDMILSASR-DK-------TIIMWKLTRD 71 (340)
T ss_dssp TTEEEEEET-TS-------CEEEEEECCS
T ss_pred CCEEEEEcC-CC-------eEEEEECCCC
Confidence 456677777 66 6777776543
No 71
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.07 E-value=1.6 Score=38.64 Aligned_cols=93 Identities=5% Similarity=-0.012 Sum_probs=45.8
Q ss_pred cceeeccC-CCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCC---c----eEeCCCCCCCCC
Q 016201 97 ATFADLPA-PDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN---K----WVDRFDMPKDMA 168 (393)
Q Consensus 97 ~~~~~~~~-~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~----W~~~~~~~~~~~ 168 (393)
..+..+|. ...+-..+...+....-.++....+.+++.|+.+ ..+..||+.+. . .+.+..+..+
T Consensus 79 g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-- 150 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKVK-- 150 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSSC--
T ss_pred CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEeeC--
Confidence 36788887 7666544433111111112222225566666654 35777876640 0 2223333322
Q ss_pred cceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 169 HSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 169 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
..-.+++...+. +++|+. ...+..||..+
T Consensus 151 ~~v~~~~~~~~~-l~~~~~--------d~~i~i~d~~~ 179 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMN--------NSQVQWFRLPL 179 (342)
T ss_dssp CCEEEEEECSSE-EEEEES--------TTEEEEEESSC
T ss_pred CceEEEEecCCc-EEEEeC--------CCeEEEEECCc
Confidence 223345555565 455432 34588899877
No 72
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.05 E-value=1.6 Score=38.23 Aligned_cols=23 Identities=17% Similarity=-0.006 Sum_probs=15.9
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCc
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSG 62 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~ 62 (393)
++.+.+.|+. ++ .+..||..+.+
T Consensus 20 ~g~~las~s~-D~-------~v~iw~~~~~~ 42 (297)
T 2pm7_B 20 YGKRMATCSS-DK-------TIKIFEVEGET 42 (297)
T ss_dssp TSSEEEEEET-TS-------CEEEEEBCSSC
T ss_pred CCCEEEEEeC-CC-------EEEEEecCCCC
Confidence 4567777877 66 67888876543
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.04 E-value=1.8 Score=38.59 Aligned_cols=140 Identities=11% Similarity=0.018 Sum_probs=66.2
Q ss_pred cceeeeeecCCCceEEecCCCCCccccccceeEEecCCc-chhhHHhhcceeeccCCCCCeEEcCCCCccc--------c
Q 016201 50 LSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKG-QDAERFLSATFADLPAPDLEWEQMPSAPVPR--------L 120 (393)
Q Consensus 50 ~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~r--------~ 120 (393)
.+.+..+|+.+.+-...-..... ..++++..+.. .-........+..+|..+.+-...-..+... .
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQ 142 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCE
T ss_pred CccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCC
Confidence 44788899887664332222111 12222222211 0011112237888888776532221111110 0
Q ss_pred CccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCe
Q 016201 121 DGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSR 198 (393)
Q Consensus 121 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (393)
-..++.. ++.+|+.+... ...++++|+.+.+-...-+.... .-...+....++.+|+... ...
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~---------~~~ 207 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTGK-MSTGLALDSEGKRLYTTNA---------DGE 207 (353)
T ss_dssp EEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCCT-TCCCCEEETTTTEEEEECT---------TSE
T ss_pred CceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCCC-ccceEEECCCCCEEEEEcC---------CCe
Confidence 1223332 45677776322 14589999987764332221111 1112233334566777642 356
Q ss_pred eEEEeCCCCCe
Q 016201 199 TFVLDSETRKW 209 (393)
Q Consensus 199 v~~yd~~~~~W 209 (393)
+..||+.+.+-
T Consensus 208 i~~~d~~~~~~ 218 (353)
T 3vgz_A 208 LITIDTADNKI 218 (353)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCeE
Confidence 88999988753
No 74
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.98 E-value=0.92 Score=40.91 Aligned_cols=161 Identities=15% Similarity=0.118 Sum_probs=80.9
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 176 (393)
.+++-.....+|+.+.. +......++... .+.+|++|- . ..+++-.-...+|+.+............+++.
T Consensus 16 ~~~~s~d~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~-~------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~ 87 (327)
T 2xbg_A 16 GSAIPALDYNPWEAIQL-PTTATILDMSFIDRHHGWLVGV-N------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSF 87 (327)
T ss_dssp --CCCBCSSCCEEEEEC-SCSSCEEEEEESSSSCEEEEET-T------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEE
T ss_pred ceeecCCCCCCceEeec-CCCCcEEEEEECCCCcEEEEcC-C------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEe
Confidence 45555556678988863 322222333332 457888653 1 12444443457899975321111123445555
Q ss_pred eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCC-CCCCCceEE-EECCEEEEEccCCCCCCCCCcceeEeeee
Q 016201 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP-SPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (393)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 254 (393)
.++.+|++|- ...+++-+-.-.+|+++.... .+.....++ .-++.+|+.|.. + . .|.-
T Consensus 88 ~~~~~~~~g~---------~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-g-----~--v~~S--- 147 (327)
T 2xbg_A 88 QGNEGWIVGE---------PPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV-G-----A--IYRT--- 147 (327)
T ss_dssp ETTEEEEEEE---------TTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT-C-----C--EEEE---
T ss_pred cCCeEEEEEC---------CCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC-c-----c--EEEE---
Confidence 6788998762 123444333357899987431 222223333 346788887642 1 1 2221
Q ss_pred ccccccCCeEEeccCCCCCCceeEEEE-CCEEEEEc
Q 016201 255 DGKALEKAWRTEIPIPRGGPHRACFVF-NDRLFVVG 289 (393)
Q Consensus 255 d~~~~~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~G 289 (393)
.....+|+.+........ ++++.. +++++++|
T Consensus 148 --~DgG~tW~~~~~~~~~~~-~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 148 --KDSGKNWQALVQEAIGVM-RNLNRSPSGEYVAVS 180 (327)
T ss_dssp --SSTTSSEEEEECSCCCCE-EEEEECTTSCEEEEE
T ss_pred --cCCCCCCEEeecCCCcce-EEEEEcCCCcEEEEE
Confidence 024678998764322222 233332 56666665
No 75
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.98 E-value=0.66 Score=42.21 Aligned_cols=99 Identities=7% Similarity=0.106 Sum_probs=49.9
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeC-CCCCCCCCcceeEEEE--e-CCEEEEEeceeCCCCCCCCCeeEEEe
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVS--D-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (393)
++..++.|+.+ ..+..+|+.+.+-... ..... .-.++.. . ++..++.|+.+ ..+..||
T Consensus 165 ~~~~l~t~s~D------~~v~lwd~~~~~~~~~~~~h~~----~v~~~~~~~~~~g~~l~sgs~D--------g~v~~wd 226 (354)
T 2pbi_B 165 SDMQILTASGD------GTCALWDVESGQLLQSFHGHGA----DVLCLDLAPSETGNTFVSGGCD--------KKAMVWD 226 (354)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEEEECCSS----CEEEEEECCCSSCCEEEEEETT--------SCEEEEE
T ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEEEEcCCCC----CeEEEEEEeCCCCCEEEEEeCC--------CeEEEEE
Confidence 34455566644 3578899887764321 11111 1112222 1 35677777643 3478889
Q ss_pred CCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 204 SETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 204 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..+.+....-. .....-..+.+ ++.+++.|+.+ ..+..|++
T Consensus 227 ~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~ 269 (354)
T 2pbi_B 227 MRSGQCVQAFE--THESDVNSVRYYPSGDAFASGSDD-----ATCRLYDL 269 (354)
T ss_dssp TTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CCCCcEEEEec--CCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEEC
Confidence 88776433211 11111122222 55677777653 45677774
No 76
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.85 E-value=2 Score=38.51 Aligned_cols=66 Identities=9% Similarity=0.156 Sum_probs=38.0
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
++.+++.|+.++ .+..||+.+.+-..+....... ........-++.+++.|+.+ ..+..||..+.
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~~-~i~~~~~~pdg~~lasg~~d--------g~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKSDV-EYSSGVLHKDSLLLALYSPD--------GILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCSSC-CCCEEEECTTSCEEEEECTT--------SCEEEEESSCT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCCCC-ceEEEEECCCCCEEEEEcCC--------CEEEEEECCCC
Confidence 456777777653 4788998887654332222211 11222223467788887643 34888998876
Q ss_pred C
Q 016201 208 K 208 (393)
Q Consensus 208 ~ 208 (393)
+
T Consensus 203 ~ 203 (343)
T 3lrv_A 203 D 203 (343)
T ss_dssp T
T ss_pred C
Confidence 5
No 77
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.80 E-value=2.1 Score=43.53 Aligned_cols=100 Identities=7% Similarity=0.052 Sum_probs=57.7
Q ss_pred cceeeccCCCCCeEEcCCCCccccC-ccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCC-CC-Cccee
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLD-GAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-DM-AHSHL 172 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~-~r~~~ 172 (393)
.-++.|++.+.+++.......+... .+++.. ++.|++... .-+.+||+.+++|+.....+. +. ...-.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEE
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeE
Confidence 3688999988888877532111111 122222 467877432 248899999998877643321 00 11122
Q ss_pred EEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC
Q 016201 173 GVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (393)
Q Consensus 173 ~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 213 (393)
+++. .++.|++..- ..-+.+||+.+.+++...
T Consensus 499 ~i~~d~~g~lWigt~---------~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTF---------GGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp EEEECTTCCEEEEES---------SSCEEEECTTCCEEEEEC
T ss_pred EEEEcCCCCEEEEEc---------CCCEEEEeCCCCeEEEcc
Confidence 2222 3577877531 123888999998887765
No 78
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.75 E-value=1.7 Score=44.34 Aligned_cols=140 Identities=8% Similarity=-0.054 Sum_probs=69.9
Q ss_pred eeeeeecCCCceEEecCCCCCcc-c-cccceeEEec-CCcc-hhhHHhhcceeeccCCCCCeEEcCCCCccccC---ccE
Q 016201 52 VASNWALEKSGVVVIPHVNATKI-D-RQRESVAVID-KKGQ-DAERFLSATFADLPAPDLEWEQMPSAPVPRLD---GAA 124 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~~~~~~~~~-~-r~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~W~~~~~~~~~r~~---~~~ 124 (393)
-+.+||+.+..+.........+. . ....-.++.. ..+. .--.....-+..||+.+.+++........... .++
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i 457 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAI 457 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEE
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEE
Confidence 36778888887776653221100 0 0111112221 1221 11111223688899888887776532111111 111
Q ss_pred EEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCC--CCCCC-cceeEEEE-eCCEEEEEeceeCCCCCCCCCee
Q 016201 125 IQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM--PKDMA-HSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRT 199 (393)
Q Consensus 125 ~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~--~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v 199 (393)
+.. ++.|++... .-+.+||+.+++|+..... +.+.. ..-.++.. .++.|++... .-+
T Consensus 458 ~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----------~Gl 519 (795)
T 4a2l_A 458 LPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE----------EGL 519 (795)
T ss_dssp EECSSSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES----------SCE
T ss_pred EECCCCCEEEEec--------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC----------Cce
Confidence 211 466777532 2378899999999887533 11111 11122222 3577887642 238
Q ss_pred EEEeCCCCCe
Q 016201 200 FVLDSETRKW 209 (393)
Q Consensus 200 ~~yd~~~~~W 209 (393)
.+||+.+.++
T Consensus 520 ~~~~~~~~~~ 529 (795)
T 4a2l_A 520 SVFKQEGLDI 529 (795)
T ss_dssp EEEEEETTEE
T ss_pred EEEeCCCCeE
Confidence 8899988887
No 79
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.75 E-value=0.37 Score=42.74 Aligned_cols=183 Identities=11% Similarity=0.069 Sum_probs=82.7
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (393)
++.+++.|+. ++ .+..||+.+........+.... .....++...+............+..+|..+.+-..
T Consensus 108 ~~~~l~~~~~-d~-------~i~~~d~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVGGE-AS-------TLSIWDLAAPTPRIKAELTSSA--PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEES-SS-------EEEEEECCCC--EEEEEEECSS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEcC-CC-------cEEEEECCCCCcceeeecccCC--CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 3445566665 55 7888888776643333222110 001111221111111111122357777776654322
Q ss_pred cCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEecee
Q 016201 112 MPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQY 188 (393)
Q Consensus 112 ~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~ 188 (393)
. +.........+.+ ++..++.|+.+ ..+..||+.+.+-...-..+. . -.+++. .+++.+++|+.
T Consensus 178 ~--~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~---~-v~~~~~s~~~~~l~~~~~- 244 (337)
T 1gxr_A 178 Q--FQGHTDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFTS---Q-IFSLGYCPTGEWLAVGME- 244 (337)
T ss_dssp E--ECCCSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSS---C-EEEEEECTTSSEEEEEET-
T ss_pred e--eecccCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCCC---c-eEEEEECCCCCEEEEEcC-
Confidence 1 1111111122222 55667777654 358889988765433222222 1 222333 35666667653
Q ss_pred CCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 189 GPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
...+..||..+..-..+..... .-..+... ++++++.++.+ ..+..|++
T Consensus 245 -------~~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~ 294 (337)
T 1gxr_A 245 -------SSNVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGKWFVSTGKD-----NLLNAWRT 294 (337)
T ss_dssp -------TSCEEEEETTSSCEEEECCCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred -------CCcEEEEECCCCCeEEEcCCcc--ceeEEEECCCCCEEEEecCC-----CcEEEEEC
Confidence 2348889988765333322111 11122222 45666666653 34566664
No 80
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.68 E-value=1 Score=45.90 Aligned_cols=203 Identities=10% Similarity=0.035 Sum_probs=100.1
Q ss_pred eeeeeecCCCceEEecCCCCCccccccceeEEecC-CcchhhHHhhcceeeccCCCCCeEEcCCCCc---cccC-ccEEE
Q 016201 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDK-KGQDAERFLSATFADLPAPDLEWEQMPSAPV---PRLD-GAAIQ 126 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~---~r~~-~~~~~ 126 (393)
-+.+||+++..+..+.....+ ...-.++..+ .+..--... .-+++||+.+.+|+.....+. +... .+++.
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~----~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNE----LLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTC----CCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred CEEEEcCCCCcEEEeccCCCC----CCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 577888888887776532100 0111122222 221111111 368899998888866543221 1111 11111
Q ss_pred E-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCC-cceeEEEE-eCCEEEEEeceeCCCCCCCCCee-EEE
Q 016201 127 I-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMA-HSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRT-FVL 202 (393)
Q Consensus 127 ~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v-~~y 202 (393)
- ++.|++..-. .-+.+||+.+++++...... ..+ ..-.++.. .++.|++... .-+ .+|
T Consensus 503 d~~g~lWigt~~-------~Gl~~~~~~~~~~~~~~~~~-~l~~~~i~~i~~d~~g~lWi~T~----------~Glv~~~ 564 (781)
T 3v9f_A 503 DSEGRFWIGTFG-------GGVGIYTPDMQLVRKFNQYE-GFCSNTINQIYRSSKGQMWLATG----------EGLVCFP 564 (781)
T ss_dssp CTTCCEEEEESS-------SCEEEECTTCCEEEEECTTT-TCSCSCEEEEEECTTSCEEEEET----------TEEEEES
T ss_pred cCCCCEEEEEcC-------CCEEEEeCCCCeEEEccCCC-CCCCCeeEEEEECCCCCEEEEEC----------CCceEEE
Confidence 1 4677774321 23788999999888764311 111 11223333 3577887642 225 889
Q ss_pred eCCCCCeEeCC---CCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEec---cCCCCCCc
Q 016201 203 DSETRKWDSIP---PLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEI---PIPRGGPH 275 (393)
Q Consensus 203 d~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~---~~p~~~~~ 275 (393)
|+.+.+++... .+|.... .+++.- ++.|++.+. ..+.+|+ |.+.+++... -++...+.
T Consensus 565 d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~-------~~~~~~~~~~~~dGl~~~~f~ 629 (781)
T 3v9f_A 565 SARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYI-------TSKKCFYTYDHSNNIPQGSFI 629 (781)
T ss_dssp CTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEE-------TTTTEEEEECGGGTCCSSCEE
T ss_pred CCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEE-------CCCCceEEecccCCccccccc
Confidence 99888877654 2443332 233332 567887642 1233333 5666665543 24433332
Q ss_pred e-eEEEE-CCEEEEEcCCCC
Q 016201 276 R-ACFVF-NDRLFVVGGQEG 293 (393)
Q Consensus 276 ~-~~~~~-~~~iyv~GG~~~ 293 (393)
. +++.. +++||+ ||.++
T Consensus 630 ~~~~~~~~~G~l~~-g~~~G 648 (781)
T 3v9f_A 630 SGCVTKDHNGLIYF-GSING 648 (781)
T ss_dssp EEEEEECTTSCEEE-EETTE
T ss_pred cCceEECCCCEEEE-ECCCc
Confidence 2 23333 556555 55554
No 81
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.54 E-value=0.64 Score=41.60 Aligned_cols=103 Identities=6% Similarity=-0.055 Sum_probs=52.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCc--eEeCCCCCCCCCcceeEEE-----EeCCEEEEEeceeCCCCCCCCCeeE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVV-----SDGRYIYIVSGQYGPQCRGPTSRTF 200 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~-----~~~~~iyv~GG~~~~~~~~~~~~v~ 200 (393)
++..++.|+.++ .+..||+.+.+ ...+........+...+++ ..++.+++.|+. ...+.
T Consensus 128 ~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~--------d~~i~ 193 (357)
T 3i2n_A 128 GAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD--------NGDIK 193 (357)
T ss_dssp CCCEEEEEETTS------CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET--------TSEEE
T ss_pred CccEEEEEeCCC------eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc--------CCeEE
Confidence 455677777543 47888887764 3333322221112233333 146667777653 24588
Q ss_pred EEeCCCCCeEeCCCCCCCCCCceEEEE----CCEEEEEccCCCCCCCCCcceeEe
Q 016201 201 VLDSETRKWDSIPPLPSPRYSPATQLW----RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 201 ~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.||..+.+-....... ..-.++... ++..++.|+.+ ..+..|++
T Consensus 194 i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~ 241 (357)
T 3i2n_A 194 LFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATSLE-----GKFHVFDM 241 (357)
T ss_dssp EEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEEST-----TEEEEEEE
T ss_pred EEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeC
Confidence 8998876533222111 112223332 45666666653 35666665
No 82
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.50 E-value=1.2 Score=40.12 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=48.7
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCc--eEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
++..++.||.+ ..+.+||+.+.. ......+..............+++ ++.|+. -..+..||..
T Consensus 108 ~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~--------d~~i~~wd~~ 172 (340)
T 1got_B 108 SGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG--------DTTCALWDIE 172 (340)
T ss_dssp TSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEET--------TSCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEEC--------CCcEEEEECC
Confidence 56677778765 357788877643 111111111001112222234565 444432 2347888988
Q ss_pred CCCeEeCCCCCCCCC-CceEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 206 TRKWDSIPPLPSPRY-SPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 206 ~~~W~~~~~~p~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+.+-... +..... -.+++.. ++.+++.|+.+ ..+..|++
T Consensus 173 ~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~ 213 (340)
T 1got_B 173 TGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDV 213 (340)
T ss_dssp TTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEEC
Confidence 7653221 111111 1122222 56677777764 46677774
No 83
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.49 E-value=0.29 Score=43.40 Aligned_cols=102 Identities=8% Similarity=0.080 Sum_probs=50.9
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++.++.|+.+ ..+.+||+.+.+......+.... ..-.+++. -+++.++.|+.+ ..+..||..+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d--------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSSA-PACYALAISPDSKVCFSCCSD--------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEEEECSS-SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeeecccCC-CceEEEEECCCCCEEEEEeCC--------CcEEEEeCCC
Confidence 45666777654 35888999888754443332211 11223333 255666666532 3488899887
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.+....- .........+.. ++..++.++.+ ..+..|++
T Consensus 173 ~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~ 212 (337)
T 1gxr_A 173 QTLVRQF--QGHTDGASCIDISNDGTKLWTGGLD-----NTVRSWDL 212 (337)
T ss_dssp TEEEEEE--CCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred Cceeeee--ecccCceEEEEECCCCCEEEEEecC-----CcEEEEEC
Confidence 6543221 111111122222 55566666653 34555653
No 84
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.47 E-value=2.2 Score=36.93 Aligned_cols=119 Identities=8% Similarity=0.068 Sum_probs=60.4
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~ 175 (393)
..+..+|+ +.+............-.+++.. ++++|+.... ...+.+||+ +.+..... ++... ....+++
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~-~~~~~i~ 189 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ------NNAIGRITE-SGDITEFK-IPTPA-SGPVGIT 189 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEE-CSSTT-CCEEEEE
T ss_pred ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC------CCEEEEEcC-CCcEEEee-CCCCC-CcceeEE
Confidence 36788888 5554433211111111223332 5678886531 246889999 77766532 22211 1222344
Q ss_pred Ee-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEc
Q 016201 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMG 235 (393)
Q Consensus 176 ~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 235 (393)
.. ++.+|+... ....+.+||+ +.+..... ++........+.+ ++.||+..
T Consensus 190 ~~~~g~l~v~~~--------~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 190 KGNDDALWFVEI--------IGNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp ECTTSSEEEEET--------TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEE
T ss_pred ECCCCCEEEEcc--------CCceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEec
Confidence 43 577888752 1356899999 77665542 1211122222333 56788774
No 85
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.43 E-value=0.47 Score=43.61 Aligned_cols=26 Identities=4% Similarity=0.026 Sum_probs=16.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD 159 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 159 (393)
+++.++.|+.+ ..+..||+.+.+-..
T Consensus 160 ~~~~l~~~~~d------~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 160 DGTHIISMDVE------NVTILWNVISGTVMQ 185 (425)
T ss_dssp TSSEEEEEETT------CCEEEEETTTTEEEE
T ss_pred CCCEEEEEecC------CeEEEEECCCCcEEE
Confidence 45566666654 347788887766443
No 86
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.41 E-value=0.65 Score=42.86 Aligned_cols=64 Identities=3% Similarity=-0.055 Sum_probs=33.9
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++++++.|+.+ ..+.+||+.+.+-. ..+... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 150 ~~~~l~s~s~d------~~i~iwd~~~~~~~--~~~~~h-~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~ 212 (420)
T 3vl1_A 150 SGEALISSSQD------MQLKIWSVKDGSNP--RTLIGH-RATVTDIAIIDRGRNVLSASLD--------GTIRLWECGT 212 (420)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCCC--EEEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCcCc--eEEcCC-CCcEEEEEEcCCCCEEEEEcCC--------CcEEEeECCC
Confidence 56677777754 35888998765421 111110 0112223332 55566666533 3477888876
Q ss_pred CC
Q 016201 207 RK 208 (393)
Q Consensus 207 ~~ 208 (393)
.+
T Consensus 213 ~~ 214 (420)
T 3vl1_A 213 GT 214 (420)
T ss_dssp TE
T ss_pred Cc
Confidence 64
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.36 E-value=1.1 Score=40.86 Aligned_cols=145 Identities=4% Similarity=-0.148 Sum_probs=67.4
Q ss_pred EEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCC-cchhhHHhhcceeeccCCCCCeEEc
Q 016201 34 FMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKK-GQDAERFLSATFADLPAPDLEWEQM 112 (393)
Q Consensus 34 ~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~W~~~ 112 (393)
.+++.|+. ++ .+..||..+............ .....+++..... ...........+..+|........+
T Consensus 87 ~~l~s~~~-dg-------~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSK-GG-------DIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEB-TS-------CEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEE
T ss_pred CEEEEEcC-CC-------eEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEE
Confidence 46666666 55 788898887766554332111 0111222222211 0000111223566667665544443
Q ss_pred CCCCccccC-ccEEE-ECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCE-EEEEecee
Q 016201 113 PSAPVPRLD-GAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQY 188 (393)
Q Consensus 113 ~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~ 188 (393)
......... .+++. -++++++.|+.+ ..+..||+....-..+..... .-.+++.. ++. +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEEEEETT
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEEEEeCC
Confidence 322211111 11222 245677777754 358889986554443332221 12223332 344 67776532
Q ss_pred CCCCCCCCCeeEEEeCCC
Q 016201 189 GPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~ 206 (393)
..+..||..+
T Consensus 227 --------~~i~iwd~~~ 236 (383)
T 3ei3_B 227 --------ATVKLWDLRN 236 (383)
T ss_dssp --------SEEEEEEGGG
T ss_pred --------CEEEEEeCCC
Confidence 3477888776
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.33 E-value=2.4 Score=38.19 Aligned_cols=34 Identities=3% Similarity=0.001 Sum_probs=17.9
Q ss_pred cEEEEecCCCCCCCCcccceeeeeecCCCceEEecC
Q 016201 33 DFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPH 68 (393)
Q Consensus 33 ~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~ 68 (393)
+....+|.+..+ ...-=.+..+|+++.+...+..
T Consensus 13 ~~~~~vg~y~~~--~~~~i~~~~~d~~~g~~~~~~~ 46 (361)
T 3scy_A 13 ELTMLVGTYTSG--NSKGIYTFRFNEETGESLPLSD 46 (361)
T ss_dssp EEEEEEEECCSS--SCCEEEEEEEETTTCCEEEEEE
T ss_pred ceEEEEEeccCC--CCCCEEEEEEeCCCCCEEEeec
Confidence 445567766433 1111135556777777766544
No 89
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.30 E-value=2.1 Score=39.15 Aligned_cols=106 Identities=8% Similarity=0.111 Sum_probs=51.7
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCc------eE-eCCCCCCCCCcceeEEEEe-C-CEEEEEeceeCCCCCCCCCee
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNK------WV-DRFDMPKDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRT 199 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~------W~-~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v 199 (393)
+.+++.|+.++ .+.+||+.+.+ -. .+...... ...-.+++.. + +.+++.|+.+ ..+
T Consensus 126 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d--------g~v 190 (416)
T 2pm9_A 126 DNVLASGGNNG------EIFIWDMNKCTESPSNYTPLTPGQSMSS-VDEVISLAWNQSLAHVFASAGSS--------NFA 190 (416)
T ss_dssp TTBEEEECSSS------CEEBCBTTTTSSCTTTCCCBCCCCSCCS-SCCCCEEEECSSCTTEEEEESSS--------SCE
T ss_pred CCEEEEEcCCC------eEEEEECCCCccccccccccccccccCC-CCCeeEEEeCCCCCcEEEEEcCC--------CCE
Confidence 66777777653 47788887764 11 11111111 1112233332 2 5677777543 348
Q ss_pred EEEeCCCCCeEeCCCCCC-----CCCCceEEEE-C-CEEEEEccCCCCCCCCCcceeEe
Q 016201 200 FVLDSETRKWDSIPPLPS-----PRYSPATQLW-R-GRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 200 ~~yd~~~~~W~~~~~~p~-----~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..||..+.+-...-..+. ...-..++.. + ..+++.|+.++. ...+..|++
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~ 247 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDL 247 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEET
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeC
Confidence 889988765433222221 1111222222 2 246777665421 226677775
No 90
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.18 E-value=0.87 Score=41.54 Aligned_cols=21 Identities=14% Similarity=-0.001 Sum_probs=15.2
Q ss_pred EEEEecCCCCCCCCcccceeeeeecCCCc
Q 016201 34 FMWASSSSSFSSSSAHLSVASNWALEKSG 62 (393)
Q Consensus 34 ~ly~~GG~~~g~~~~~~~~~~~~d~~~~~ 62 (393)
.+++.|+. ++ .+..||..+..
T Consensus 27 ~~l~s~~~-dg-------~i~iw~~~~~~ 47 (397)
T 1sq9_A 27 SFTVSCSG-DG-------YLKVWDNKLLD 47 (397)
T ss_dssp SEEEEEET-TS-------EEEEEESBCCT
T ss_pred CeEEEEcC-CC-------EEEEEECCCcc
Confidence 56777777 66 78888877665
No 91
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.90 E-value=0.78 Score=41.77 Aligned_cols=102 Identities=14% Similarity=0.177 Sum_probs=51.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+++.++.|+.++ .+.++|+.+.+-... +.... ..-.+++.. ++.+++.++.+ ..+..||..
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~--~~~h~-~~v~~v~~s~~~~~~~~s~~~d--------g~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKS--YNAHS-SEVNCVAACPGKDTIFLSCGED--------GRILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEE--ECCCS-SCEEEEEECTTCSSCEEEEETT--------SCEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEE--EcCCC-CCEEEEEEccCCCceeeeeccC--------CceEEEECC
Confidence 567777787653 478899888764332 22110 112223332 33467776643 337778887
Q ss_pred CCCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceeEe
Q 016201 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+.+-...............+.. ++.+++.|+.+ ..+..|++
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~ 256 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNI 256 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEES
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeecc-----cceeEEEC
Confidence 6643322222212222222332 35677777653 35666664
No 92
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.88 E-value=2.1 Score=39.84 Aligned_cols=101 Identities=7% Similarity=-0.037 Sum_probs=54.7
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCE-EEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNL-FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 174 (393)
.++.+|..+.+-..+...+. ......+ +++ |++.+..++. ..++.+|+.+.+...+...+. ......
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~---~~~~~~~spdg~~la~~~~~~g~----~~i~~~d~~~~~~~~l~~~~~---~~~~~~ 273 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR---HNGAPAFSPDGSKLAFALSKTGS----LNLYVMDLASGQIRQVTDGRS---NNTEPT 273 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS---CEEEEEECTTSSEEEEEECTTSS----CEEEEEETTTCCEEECCCCSS---CEEEEE
T ss_pred EEEEEECCCCcEEEeecCCC---cccCEEEcCCCCEEEEEEecCCC----ceEEEEECCCCCEEeCcCCCC---cccceE
Confidence 78888888777655543321 1112222 444 5555554332 469999999988776654332 111112
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 213 (393)
..-+++.+++++... ....++.+|..+.+-..+.
T Consensus 274 ~spdg~~l~~~s~~~-----g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQA-----GRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp ECTTSSEEEEEECTT-----SSCEEEEEETTSSCCEECC
T ss_pred ECCCCCEEEEEECCC-----CCcEEEEEECCCCCEEEEe
Confidence 223555444443211 1357999999887655543
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.85 E-value=2.2 Score=39.94 Aligned_cols=63 Identities=19% Similarity=0.312 Sum_probs=36.0
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEe--CCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--RFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++++.|+.+ ..+.+||+.+.+-.. +..... .-...+ .. ++++++.|+. -..+..||..+
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~~--~v~~~~-~s-d~~~l~s~~~--------d~~v~vwd~~~ 271 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFGHKH--FVSSIC-CG-KDYLLLSAGG--------DDKIFAWDWKT 271 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCCCSS--CEEEEE-EC-STTEEEEEES--------SSEEEEEETTT
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecCCCC--ceEEEE-EC-CCCEEEEEeC--------CCeEEEEECCC
Confidence 7788888765 347888887665332 111111 111222 22 6777777763 24588888887
Q ss_pred CCe
Q 016201 207 RKW 209 (393)
Q Consensus 207 ~~W 209 (393)
.+.
T Consensus 272 ~~~ 274 (450)
T 2vdu_B 272 GKN 274 (450)
T ss_dssp CCE
T ss_pred CcE
Confidence 664
No 94
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.75 E-value=4.1 Score=37.48 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=54.5
Q ss_pred eeeccCCC--CCeEEcCCCCccccCccEEEE---CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCC---CCCCCc-
Q 016201 99 FADLPAPD--LEWEQMPSAPVPRLDGAAIQI---KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM---PKDMAH- 169 (393)
Q Consensus 99 ~~~~~~~~--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---~~~~~r- 169 (393)
++.++... .+|+.+.+......-++++.. .+.||+.+..... -.-+++.+-...+|+.+... +....+
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~---g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHL---GPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--C---CEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCC---CccEEEeCCCCCCceECCccccCCCccccc
Confidence 44454433 689876421111112333332 4678876542111 12477777788899988632 211101
Q ss_pred ------ceeEEEEe----CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC
Q 016201 170 ------SHLGVVSD----GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (393)
Q Consensus 170 ------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 213 (393)
.-.+++.. .+.||+.+- ..-+++.+-...+|+.+.
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECH
T ss_pred ccccccceeEEEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECc
Confidence 11233433 577887642 234888888888999875
No 95
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.75 E-value=4.7 Score=40.16 Aligned_cols=65 Identities=18% Similarity=0.130 Sum_probs=35.6
Q ss_pred cceEEEEECCCCceEeCCCCCCCCCcceeEEE-EeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC-CeEeC
Q 016201 144 HSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR-KWDSI 212 (393)
Q Consensus 144 ~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~-~W~~~ 212 (393)
...++++|+.+.+-..+...... ...-..++ .-+++..+++..+... ....++.+|+.+. ....+
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTTCCEEEEE
T ss_pred eeEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCCCceeeEE
Confidence 35799999998876655432111 11112222 2355544444433321 2467999999887 55544
No 96
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.74 E-value=1 Score=39.97 Aligned_cols=132 Identities=8% Similarity=0.050 Sum_probs=63.9
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCc-chhhHHhhcceeeccCCCCCe-
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKG-QDAERFLSATFADLPAPDLEW- 109 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~W- 109 (393)
.+.+|+.+.. ++ .+..||+.+.+.......... .. ++++-.+.. .-........++.+|..+.+-
T Consensus 9 ~~~~~v~~~~-~~-------~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 9 SNFGIVVEQH-LR-------RISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp CCEEEEEEGG-GT-------EEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred CCEEEEEecC-CC-------eEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 5678888766 44 788999988877554333221 11 222222211 111111123788888877653
Q ss_pred -EEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCC-EEEEE
Q 016201 110 -EQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR-YIYIV 184 (393)
Q Consensus 110 -~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~-~iyv~ 184 (393)
..+.....++ ++++.. +..|| ++...+. ...+.++|+.+.+-...-+... . ...++. -++ .+|+.
T Consensus 76 ~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~---~-~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 76 VVAIQEGQSSM--ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPIPY---D-AVGIAISPNGNGLILI 145 (331)
T ss_dssp EEEEEECSSCC--CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEECCT---T-EEEEEECTTSSCEEEE
T ss_pred EEecccCCCCc--cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEECCC---C-ccceEECCCCCEEEEE
Confidence 2221111222 212222 34566 3332211 1269999998887544322221 1 233333 344 57777
Q ss_pred ec
Q 016201 185 SG 186 (393)
Q Consensus 185 GG 186 (393)
+.
T Consensus 146 ~~ 147 (331)
T 3u4y_A 146 DR 147 (331)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.69 E-value=2.3 Score=43.07 Aligned_cols=130 Identities=8% Similarity=-0.018 Sum_probs=58.7
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCC-ceEeCCCCCCCCCcceeEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~~~ 174 (393)
.+..+|..+.+....- ......-..+.+ ++..++.|+.+ ..+.+||..++ .... .+... ...-.++
T Consensus 78 ~i~vw~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~--~~~~~-~~~v~~~ 146 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQ--TFEGH-EHFVMCV 146 (814)
T ss_dssp EEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEE--EEECC-SSCEEEE
T ss_pred eEEEEECCCCcEEEEE--ecCCCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEE--EEcCC-CCcEEEE
Confidence 5677776665542211 111111111222 45556666644 35788888765 2222 11110 0112233
Q ss_pred EEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCccee
Q 016201 175 VSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHW 249 (393)
Q Consensus 175 ~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 249 (393)
+.. ++.+++.|+.+ ..+..||..+..-..............+... ++.+++.|+.+ ..+..|
T Consensus 147 ~~~p~~~~~l~~~~~d--------g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~ 213 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLD--------RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-----LTIKIW 213 (814)
T ss_dssp EEETTEEEEEEEEETT--------SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-----SEEEEE
T ss_pred EEEcCCCCEEEEEeCC--------CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-----CEEEEE
Confidence 333 45677776532 4588888765442111111111112222222 56677777653 345555
Q ss_pred Ee
Q 016201 250 SI 251 (393)
Q Consensus 250 ~~ 251 (393)
++
T Consensus 214 d~ 215 (814)
T 3mkq_A 214 DY 215 (814)
T ss_dssp ET
T ss_pred EC
Confidence 53
No 98
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.64 E-value=0.73 Score=39.66 Aligned_cols=104 Identities=9% Similarity=-0.026 Sum_probs=55.0
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEE-ECCEEEEEecCCCCCCccceEEEEECCC-CceEeCCCCCCCCCcceeEE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTD-NKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~r~~~~~ 174 (393)
..++.+|..+.+...+.... ..-.+++. -+++.+++++ + ..++++|+.+ .+...+....... ......
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~-~------~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~ 91 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTP--ELFEAPNWSPDGKYLLLNS-E------GLLYRLSLAGDPSPEKVDTGFATI-CNNDHG 91 (297)
T ss_dssp EEEEEEETTTTEEEEEEEES--SCCEEEEECTTSSEEEEEE-T------TEEEEEESSSCCSCEECCCTTCCC-BCSCCE
T ss_pred eeEEEEeCCCCceeeeccCC--cceEeeEECCCCCEEEEEc-C------CeEEEEeCCCCCCceEeccccccc-cccceE
Confidence 36788887776654433211 11111211 2556566654 1 3689999998 7776655333211 112222
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (393)
..-+++.+++++.... ....++.+|..+..-..+..
T Consensus 92 ~spdg~~l~~~~~~~~----~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 92 ISPDGALYAISDKVEF----GKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp ECTTSSEEEEEECTTT----SSCEEEEEETTCCCCEECCS
T ss_pred ECCCCCEEEEEEeCCC----CcceEEEEECCCCceEEeec
Confidence 2335555555543221 25678999988776555543
No 99
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.63 E-value=3.2 Score=35.85 Aligned_cols=180 Identities=11% Similarity=-0.023 Sum_probs=82.8
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCcc-ccccceeEEecCCcch-hhH-HhhcceeeccCCCCC
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKI-DRQRESVAVIDKKGQD-AER-FLSATFADLPAPDLE 108 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~-~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 108 (393)
++.||+.... ++ .+.+||++...-..++....... .....++++....+.. ... ..+..+..||.....
T Consensus 40 ~g~l~v~~~~-~~-------~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~ 111 (286)
T 1q7f_A 40 QNDIIVADTN-NH-------RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQF 111 (286)
T ss_dssp TCCEEEEEGG-GT-------EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCE
T ss_pred CCCEEEEECC-CC-------EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcE
Confidence 4567776544 33 67888877554334432111100 0112333332222111 111 113467888854433
Q ss_pred eEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEec
Q 016201 109 WEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSG 186 (393)
Q Consensus 109 W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG 186 (393)
-..+.... ...-.+++.. +++|||....+ ..+.+||+..+....+..... . ....+++. -++.+|+...
T Consensus 112 ~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~-~-~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 112 VRKFGATI-LQHPRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKH-L-EFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EEEECTTT-CSCEEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTT-C-SSEEEEEECSSSEEEEEEG
T ss_pred EEEecCcc-CCCceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCc-c-CCcEEEEECCCCCEEEEEC
Confidence 23332111 0111222222 56788875432 468889987665444421111 1 11223333 3578998863
Q ss_pred eeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccC
Q 016201 187 QYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGS 237 (393)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 237 (393)
. ...+.+||+....-..+..-. .......+.+ ++.||+....
T Consensus 183 ~--------~~~i~~~~~~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 183 R--------AHCVKVFNYEGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp G--------GTEEEEEETTCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECS
T ss_pred C--------CCEEEEEcCCCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCC
Confidence 2 356899998765444443211 0011122233 5678887643
No 100
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.63 E-value=0.93 Score=42.35 Aligned_cols=74 Identities=9% Similarity=0.137 Sum_probs=44.1
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCC-EEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR-YIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+++.+++++.+.. ...++++|+.+.+...+...+. . ..+++. -++ +|++.+..++ ...++.+|+.
T Consensus 189 dg~~la~~s~~~~---~~~i~~~d~~tg~~~~l~~~~~---~-~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~ 255 (415)
T 2hqs_A 189 DGSKLAYVTFESG---RSALVIQTLANGAVRQVASFPR---H-NGAPAFSPDGSKLAFALSKTG------SLNLYVMDLA 255 (415)
T ss_dssp TSSEEEEEECTTS---SCEEEEEETTTCCEEEEECCSS---C-EEEEEECTTSSEEEEEECTTS------SCEEEEEETT
T ss_pred CCCEEEEEEecCC---CcEEEEEECCCCcEEEeecCCC---c-ccCEEEcCCCCEEEEEEecCC------CceEEEEECC
Confidence 5555566654432 2479999999988776654432 1 222222 244 4554543221 4569999999
Q ss_pred CCCeEeCCC
Q 016201 206 TRKWDSIPP 214 (393)
Q Consensus 206 ~~~W~~~~~ 214 (393)
+.+...+..
T Consensus 256 ~~~~~~l~~ 264 (415)
T 2hqs_A 256 SGQIRQVTD 264 (415)
T ss_dssp TCCEEECCC
T ss_pred CCCEEeCcC
Confidence 888766654
No 101
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.63 E-value=3.2 Score=35.82 Aligned_cols=118 Identities=11% Similarity=0.106 Sum_probs=59.1
Q ss_pred cceeeccCCCCCeEEcCCCCccccC-ccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLD-GAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 174 (393)
..+..+|+. .+..... ++..-.. .+++.. +++||+.... ...+.+||+ +.+...+. ++... ....++
T Consensus 125 ~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~-~~~~~i 193 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTNA-AAPVGI 193 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTT-CCEEEE
T ss_pred CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEee-CCCCC-CCcceE
Confidence 367888876 5544332 1211111 222222 4678886532 145889998 66665532 22221 222334
Q ss_pred EEe-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEc
Q 016201 175 VSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMG 235 (393)
Q Consensus 175 ~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 235 (393)
+.. ++.+|+... ....+.+||+ +.+..... ++........+.+ ++.||+..
T Consensus 194 ~~d~~g~l~v~~~--------~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 194 TSGNDGALWFVEI--------MGNKIGRITT-TGEISEYD-IPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp EECTTSSEEEEET--------TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEE
T ss_pred EECCCCCEEEEcc--------CCCEEEEEcC-CCcEEEEE-CCCCCCCceEEEECCCCCEEEec
Confidence 433 678888752 1346889998 55555432 1211112222333 56788875
No 102
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.63 E-value=1 Score=41.82 Aligned_cols=65 Identities=8% Similarity=-0.016 Sum_probs=34.6
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe-CCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++..++.|+.+ ..+..||+.+..-.. +..... .........++.+++.|+.+ ..+..||..+
T Consensus 203 ~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~~~~g~~l~s~s~D--------~~v~vwd~~~ 265 (410)
T 1vyh_C 203 NGDHIVSASRD------KTIKMWEVQTGYCVKTFTGHRE---WVRMVRPNQDGTLIASCSND--------QTVRVWVVAT 265 (410)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEEEECCSS---CEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEeCCCc---cEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 45667777765 358889988765322 111111 11111122356677777643 3366777766
Q ss_pred CCe
Q 016201 207 RKW 209 (393)
Q Consensus 207 ~~W 209 (393)
...
T Consensus 266 ~~~ 268 (410)
T 1vyh_C 266 KEC 268 (410)
T ss_dssp CCE
T ss_pred Cce
Confidence 543
No 103
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.62 E-value=0.69 Score=41.22 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=37.0
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-C--CEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+.+++.|+.++ .+.++|+.+.+|..+..+.... ..-.+++.. + +.+++.|+.++ .+..||..
T Consensus 71 ~~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~h~-~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYDR------KVIIWREENGTWEKSHEHAGHD-SSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETTS------CEEEECCSSSCCCEEEEECCCS-SCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECCC------EEEEEECCCCcceEEEEccCCC-CceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 56777777653 4788898887775543332110 111223332 2 56677775432 36667766
Q ss_pred CC-CeEeC
Q 016201 206 TR-KWDSI 212 (393)
Q Consensus 206 ~~-~W~~~ 212 (393)
+. .|...
T Consensus 136 ~~~~~~~~ 143 (316)
T 3bg1_A 136 GEGQWEVK 143 (316)
T ss_dssp SSSCEEEC
T ss_pred CCCCccee
Confidence 54 46543
No 104
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.55 E-value=0.48 Score=42.91 Aligned_cols=191 Identities=11% Similarity=0.049 Sum_probs=87.0
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (393)
++.+.+.||. ++ .+..||..+..|.....+... +...-..++...+............+..++.....++.
T Consensus 27 ~g~~las~~~-D~-------~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 27 AGTLLASCGG-DR-------RIRIWGTEGDSWICKSVLSEG-HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp TSSCEEEEET-TS-------CEEEEEEETTEEEEEEEECSS-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred CCCEEEEEcC-CC-------eEEEEEcCCCcceeeeeeccc-cCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 4566777777 66 788888888777543222111 00111122221111111111112245555555544443
Q ss_pred cCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCC-ceEeCCCCCCCCCcceeEEEE-eCCEEEEEece
Q 016201 112 MPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQ 187 (393)
Q Consensus 112 ~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~ 187 (393)
+..+......-..+.+ ++++++.|+.++ .+.++|+.+. .+..+..+.... ..-.+++. -++.+++.|+.
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHT-QDVKHVVWHPSQELLASASY 170 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCC-SCEEEEEECSSSSCEEEEET
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcC-CCeEEEEECCCCCEEEEEeC
Confidence 3322221111122222 567777887653 4777777654 333222222110 11112222 35666777654
Q ss_pred eCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 188 YGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+ ..+..||..+..|..+..+......-..+.+ +++.++.|+.+ ..+..|+.
T Consensus 171 d--------~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D-----~~v~iW~~ 223 (345)
T 3fm0_A 171 D--------DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD-----RTVRIWRQ 223 (345)
T ss_dssp T--------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEE
T ss_pred C--------CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC-----CeEEEecc
Confidence 3 3477788887777654333221111122222 55666676653 35666653
No 105
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.32 E-value=1.5 Score=40.87 Aligned_cols=149 Identities=7% Similarity=-0.078 Sum_probs=67.8
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCc-chhhHHhhcceeeccCCCCCeE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKG-QDAERFLSATFADLPAPDLEWE 110 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~W~ 110 (393)
++.+.+.|+. +| .+..||..+..-..+-.+... ...-.+++.....+ ..........+..+|...+.-.
T Consensus 131 ~~~~lasGs~-dg-------~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSK-GG-------DIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEET-TS-------CEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CCCEEEEEeC-CC-------EEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 4457777777 77 788888776654333222111 01112222221111 1100111224666666555443
Q ss_pred EcCCCCcccc-CccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe--CCEEEEEec
Q 016201 111 QMPSAPVPRL-DGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSG 186 (393)
Q Consensus 111 ~~~~~~~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG 186 (393)
.+........ ..++... ++++++.|+.++ .+..+|+.++.- ..+..- ...-.+++.. +..+++.|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~~---~~~~~h-~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG------NVILLNMDGKEL---WNLRMH-KKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS------BEEEEESSSCBC---CCSBCC-SSCEEEEEECTTCSSEEEEEE
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC------cEeeeccCccee---EEEecc-cceEEeeeecCCCceEEEEec
Confidence 3322221111 1223222 567888887653 478888876542 222210 0112223332 345677776
Q ss_pred eeCCCCCCCCCeeEEEeCCCCC
Q 016201 187 QYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
.++ .+..||..+..
T Consensus 271 ~d~--------~v~iwd~~~~~ 284 (435)
T 4e54_B 271 VDQ--------TVKIWDLRQVR 284 (435)
T ss_dssp TTS--------BCCEEETTTCC
T ss_pred Ccc--------eeeEEeccccc
Confidence 432 35667876543
No 106
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.31 E-value=4.7 Score=36.74 Aligned_cols=179 Identities=13% Similarity=0.126 Sum_probs=83.2
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCC--CCCCCCCcceeEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
+..++.|+.+ ..+..||+.+.+-...- ..+..-...-.++.. .++.+++.|+.++ .+..||.
T Consensus 170 ~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~ 235 (380)
T 3iz6_a 170 ETRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDL 235 (380)
T ss_dssp SSCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEET
T ss_pred CCEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEEC
Confidence 3445666654 34788898877643321 111111111222222 3677888887543 3777887
Q ss_pred CCCC--eEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEE-eccCC------CCCC
Q 016201 205 ETRK--WDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT-EIPIP------RGGP 274 (393)
Q Consensus 205 ~~~~--W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~-~~~~p------~~~~ 274 (393)
.... -..+.... ..-.+++.. ++..++.|+.+ ..+..|++ .+..-.. ....+ .+..
T Consensus 236 ~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D-----~~i~lwd~-------~~~~~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 236 RITSRAVRTYHGHE--GDINSVKFFPDGQRFGTGSDD-----GTCRLFDM-------RTGHQLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp TTTCCCCEEECCCS--SCCCEEEECTTSSEEEEECSS-----SCEEEEET-------TTTEEEEEECCCCSSSCCSSCSC
T ss_pred CCCCcceEEECCcC--CCeEEEEEecCCCeEEEEcCC-----CeEEEEEC-------CCCcEEEEecccccccccccCce
Confidence 5321 11111111 111122222 56677777764 46677775 2222111 11111 0111
Q ss_pred ceeEEEECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCC-CeEECCCCCC-CCCCcceeEEEECCEEE
Q 016201 275 HRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM-KWKVLPPMPK-PNSHIECAWVIVNNSII 351 (393)
Q Consensus 275 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~-~W~~~~~~~~-~r~~~~~~~~~~~~~i~ 351 (393)
...++..++++++.|+.++. +..+| ... .-..+..+.. ......+.....+++.+
T Consensus 302 ~~~~~s~~g~~l~~g~~dg~----------------------i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 359 (380)
T 3iz6_a 302 TSVAFSISGRLLFAGYSNGD----------------------CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL 359 (380)
T ss_dssp SEEEECSSSSEEEEECTTSC----------------------EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE
T ss_pred EEEEECCCCCEEEEEECCCC----------------------EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE
Confidence 12233347788888876653 78887 433 2223322221 11222222234578888
Q ss_pred EEcCcC
Q 016201 352 ITGGTT 357 (393)
Q Consensus 352 v~GG~~ 357 (393)
+.|+.+
T Consensus 360 ~sgs~D 365 (380)
T 3iz6_a 360 CTGSWD 365 (380)
T ss_dssp EEECTT
T ss_pred EEeeCC
Confidence 888764
No 107
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=93.13 E-value=2.2 Score=40.44 Aligned_cols=59 Identities=12% Similarity=0.189 Sum_probs=37.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
++++|++-| +..|+||..+++.... ..|. .+. --++....+++|+|-| +..++||+.+.
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~-~w~g-i~~-iDAA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKER-SWPA-VGN-CTSALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEE-CCTT-SCC-CSEEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec--------ccEEEEecccceeecc-cCCC-CCc-cchheeeCCceEEEEC----------CEEEEEcCccC
Confidence 678899877 4589999988765431 1111 112 2244445789999976 34677777653
No 108
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.12 E-value=2.1 Score=37.60 Aligned_cols=218 Identities=11% Similarity=0.078 Sum_probs=101.2
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQ 111 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 111 (393)
++.||.+.-. .+ .+.+||+.+..-..... +.. ..+++...+...-.. ....++.||+.+.+++.
T Consensus 24 ~~~l~~~d~~-~~-------~i~~~d~~~~~~~~~~~-~~~-----~~~i~~~~dG~l~v~--~~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 24 SNSLLFVDIP-AK-------KVCRWDSFTKQVQRVTM-DAP-----VSSVALRQSGGYVAT--IGTKFCALNWKEQSAVV 87 (297)
T ss_dssp TTEEEEEETT-TT-------EEEEEETTTCCEEEEEC-SSC-----EEEEEEBTTSSEEEE--ETTEEEEEETTTTEEEE
T ss_pred CCEEEEEECC-CC-------EEEEEECCCCcEEEEeC-CCc-----eEEEEECCCCCEEEE--ECCeEEEEECCCCcEEE
Confidence 4567776644 33 68899988776543322 111 112222211111101 13478899998887776
Q ss_pred cCCCCc--cccCccEEEE--CCEEEEEecCCC-----CCCccceEEEEECCCCceEeC-CCCCCCCCcceeEEEEe--CC
Q 016201 112 MPSAPV--PRLDGAAIQI--KNLFYVFAGYGS-----LDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVSD--GR 179 (393)
Q Consensus 112 ~~~~~~--~r~~~~~~~~--~~~iyv~GG~~~-----~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~--~~ 179 (393)
+..... +........+ ++++|+..-... .......++++|+.. +...+ ..+.. ..+++.. ++
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~-----pngi~~spdg~ 161 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI-----SNGLDWSLDHK 161 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB-----EEEEEECTTSC
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc-----ccceEEcCCCC
Confidence 654321 1111112222 577877432111 011235688898864 33332 11211 1233332 44
Q ss_pred EEEEEeceeCCCCCCCCCeeEEEeC--CCCCeEe---CCCCCCCCCC-ceEEE-ECCEEEEEccCCCCCCCCCcceeEee
Q 016201 180 YIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDS---IPPLPSPRYS-PATQL-WRGRLHVMGGSKENRHTPGLEHWSIA 252 (393)
Q Consensus 180 ~iyv~GG~~~~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~ 252 (393)
.+|+.... ...+++||. .+..... +..++..... ..+++ -++.||+..... ..+.+|+
T Consensus 162 ~lyv~~~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d-- 226 (297)
T 3g4e_A 162 IFYYIDSL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLD-- 226 (297)
T ss_dssp EEEEEEGG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEEC--
T ss_pred EEEEecCC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEc--
Confidence 68887532 355788875 4444321 1111111011 12222 256788774221 2244443
Q ss_pred eeccccccCCeEEeccCCCCCCceeEEEEC----CEEEEEcCCCC
Q 016201 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFN----DRLFVVGGQEG 293 (393)
Q Consensus 253 ~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~----~~iyv~GG~~~ 293 (393)
|.+.+....-++|... ..++.++ +.|||.....+
T Consensus 227 -----~~tG~~~~~i~~p~~~--~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 227 -----PVTGKRLQTVKLPVDK--TTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp -----TTTCCEEEEEECSSSB--EEEEEEESGGGCEEEEEEBCTT
T ss_pred -----CCCceEEEEEECCCCC--ceEEEEeCCCCCEEEEEcCCcC
Confidence 5555544443455332 3455554 47999876543
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.10 E-value=2.5 Score=37.66 Aligned_cols=144 Identities=8% Similarity=-0.021 Sum_probs=67.0
Q ss_pred cEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEEc
Q 016201 33 DFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQM 112 (393)
Q Consensus 33 ~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 112 (393)
+.+++.|+. ++ .+..||..+........+... ...-..++...+............+..+|..+.+-..+
T Consensus 54 g~~l~~~~~-dg-------~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSW-AN-------DVRCWEVQDSGQTIPKAQQMH--TGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEET-TS-------EEEEEEECTTSCEEEEEEEEC--SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEECC-CC-------cEEEEEcCCCCceeEEEeccc--cCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 377777877 66 688888776332221111111 01111222221111111111223577777766654332
Q ss_pred CCCCccccCccEEE----ECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEecee
Q 016201 113 PSAPVPRLDGAAIQ----IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQY 188 (393)
Q Consensus 113 ~~~~~~r~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 188 (393)
.. .......+. -++.+++.|+.+ ..+..||+.+.+-. ..+..+ ....+.......+++.+.
T Consensus 124 ~~---~~~~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~-- 188 (368)
T 3mmy_A 124 AQ---HDAPVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPM--MVLQLP--ERCYCADVIYPMAVVATA-- 188 (368)
T ss_dssp EE---CSSCEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCS--EEEECS--SCEEEEEEETTEEEEEEG--
T ss_pred cc---ccCceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEE--EEEecC--CCceEEEecCCeeEEEeC--
Confidence 11 111111222 256777777765 35888998776422 222221 223444455665555443
Q ss_pred CCCCCCCCCeeEEEeCCCCC
Q 016201 189 GPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 189 ~~~~~~~~~~v~~yd~~~~~ 208 (393)
...+..||.....
T Consensus 189 -------~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 189 -------ERGLIVYQLENQP 201 (368)
T ss_dssp -------GGCEEEEECSSSC
T ss_pred -------CCcEEEEEecccc
Confidence 2346777776543
No 110
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.07 E-value=1.7 Score=42.31 Aligned_cols=24 Identities=0% Similarity=-0.079 Sum_probs=17.5
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCce
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGV 63 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W 63 (393)
++++|+.+.. ++ .+..+|..+.+-
T Consensus 148 ~~~~~vs~~~-d~-------~V~v~D~~t~~~ 171 (543)
T 1nir_A 148 PNLFSVTLRD-AG-------QIALVDGDSKKI 171 (543)
T ss_dssp GGEEEEEEGG-GT-------EEEEEETTTCCE
T ss_pred CCEEEEEEcC-CC-------eEEEEECCCceE
Confidence 6788888765 45 778888877654
No 111
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.78 E-value=2.4 Score=37.80 Aligned_cols=139 Identities=9% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCC-----ceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN-----KWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFV 201 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~-----~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (393)
++.+++.|+.++ .+..+|.... .++.+..+..- ...-.+++. -+++.++.|+.+ ..+..
T Consensus 69 ~~~~las~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D--------~~v~i 133 (330)
T 2hes_X 69 HTSLLAAGSFDS------TVSIWAKEESADRTFEMDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRD--------KSVWI 133 (330)
T ss_dssp TSSEEEEEETTS------CEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETT--------SCEEE
T ss_pred CCCEEEEEeCCC------cEEEEEcccCcCccccceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCC--------CEEEE
Confidence 566777787653 3666776432 23322222210 011112222 356677777643 34777
Q ss_pred EeCCC--CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCcee
Q 016201 202 LDSET--RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRA 277 (393)
Q Consensus 202 yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~ 277 (393)
||... ..++.+..+......-..+.. ++.+++.|+.+ ..+..|++ .+..|..+..+........
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~-------~~~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKD-------YDDDWECVAVLNGHEGTVW 201 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEE-------ETTEEEEEEEECCCSSCEE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEC-------CCCCeeEEEEccCCCCcEE
Confidence 88732 234433322211111122222 55677777764 46777774 4445555444332222112
Q ss_pred EEEE--C--CEEEEEcCCCC
Q 016201 278 CFVF--N--DRLFVVGGQEG 293 (393)
Q Consensus 278 ~~~~--~--~~iyv~GG~~~ 293 (393)
.+.+ + +..++.|+.++
T Consensus 202 ~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EEEECCSSSSCEEEEEETTS
T ss_pred EEEecCCCCeeEEEEEeCCC
Confidence 2233 2 34566666654
No 112
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.77 E-value=0.55 Score=42.25 Aligned_cols=95 Identities=6% Similarity=-0.064 Sum_probs=48.8
Q ss_pred ceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCC-CCCCce
Q 016201 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS-PRYSPA 223 (393)
Q Consensus 145 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~ 223 (393)
-.++.+|..+.+++.+...... ......+..-++++|+.+.... ...++.||+.+.+++.+..... ...-..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~-~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAAT-QNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEEC-SCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred EEEEEEcCCCCeEEEeeeeecc-CCcceEEEccCCeEEEEEecCC------CceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 3477788888888764322211 1112222334777887763211 3568889988777766553211 111122
Q ss_pred EEEE-CC-EEEEEccCCCCCCCCCcceeEe
Q 016201 224 TQLW-RG-RLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 224 ~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
++.. ++ .||+.+.. ...+..|++
T Consensus 91 ~a~spdg~~l~~~~~~-----~~~v~v~~~ 115 (347)
T 3hfq_A 91 VAVDEARQLVYSANYH-----KGTAEVMKI 115 (347)
T ss_dssp EEEETTTTEEEEEETT-----TTEEEEEEE
T ss_pred EEECCCCCEEEEEeCC-----CCEEEEEEe
Confidence 3333 44 46666422 234556664
No 113
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.65 E-value=5 Score=35.28 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=32.0
Q ss_pred CEEEEEecCCCCCCccceEEEEECCC-CceEeCC--CCCCCCCcceeEEEE-e-CCEEEEEeceeCCCCCCCCCeeEEEe
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTD-NKWVDRF--DMPKDMAHSHLGVVS-D-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~--~~~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~v~~yd 203 (393)
..||+.+..+ ..+.+||+.+ .+...+. ....+.......++. - +..+|+.+.. ...+..||
T Consensus 141 ~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--------~~~i~~~~ 206 (343)
T 1ri6_A 141 RTLWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--------NSSVDVWE 206 (343)
T ss_dssp SEEEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--------TTEEEEEE
T ss_pred CEEEEecCCC------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC--------CCEEEEEE
Confidence 4677765322 4588899887 6665332 111110111112222 2 3457777521 35678888
Q ss_pred CCC
Q 016201 204 SET 206 (393)
Q Consensus 204 ~~~ 206 (393)
...
T Consensus 207 ~~~ 209 (343)
T 1ri6_A 207 LKD 209 (343)
T ss_dssp SSC
T ss_pred ecC
Confidence 743
No 114
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.55 E-value=0.28 Score=44.88 Aligned_cols=64 Identities=8% Similarity=0.107 Sum_probs=34.1
Q ss_pred EEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 130 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
.+++.|+.++ .+..||+.+.+-......... .....+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 195 ~~~~s~~~dg------~v~~wd~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~la~g~~d--------~~i~~wd~~~~ 259 (357)
T 4g56_B 195 TIFLSCGEDG------RILLWDTRKPKPATRIDFCAS-DTIPTSVTWHPEKDDTFACGDET--------GNVSLVNIKNP 259 (357)
T ss_dssp SCEEEEETTS------CEEECCTTSSSCBCBCCCTTC-CSCEEEEEECTTSTTEEEEEESS--------SCEEEEESSCG
T ss_pred ceeeeeccCC------ceEEEECCCCceeeeeeeccc-cccccchhhhhcccceEEEeecc--------cceeEEECCCC
Confidence 4677777653 477888877653322222111 1112233332 45677777543 34778888764
Q ss_pred C
Q 016201 208 K 208 (393)
Q Consensus 208 ~ 208 (393)
+
T Consensus 260 ~ 260 (357)
T 4g56_B 260 D 260 (357)
T ss_dssp G
T ss_pred c
Confidence 3
No 115
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.48 E-value=2.7 Score=38.58 Aligned_cols=137 Identities=9% Similarity=0.057 Sum_probs=66.2
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe-CCCCCCCCCcceeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
++.+++.|+.++ .+.+||+.+.+-.. +.....+ -.+++.. +..+++.||-. ....+..||.
T Consensus 228 ~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~----v~~~~~~p~~~~ll~~~~gs------~d~~i~i~d~ 291 (401)
T 4aez_A 228 DGLQLASGGNDN------VVQIWDARSSIPKFTKTNHNAA----VKAVAWCPWQSNLLATGGGT------MDKQIHFWNA 291 (401)
T ss_dssp TSSEEEEEETTS------CEEEEETTCSSEEEEECCCSSC----CCEEEECTTSTTEEEEECCT------TTCEEEEEET
T ss_pred CCCEEEEEeCCC------eEEEccCCCCCccEEecCCcce----EEEEEECCCCCCEEEEecCC------CCCEEEEEEC
Confidence 566777787653 58889988754322 1211111 1223332 45677776411 1345888998
Q ss_pred CCCCeEeCCCCCCCCCCceEEEE-CC-EEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCC--CCCceeEEE
Q 016201 205 ETRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRACFV 280 (393)
Q Consensus 205 ~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~--~~~~~~~~~ 280 (393)
.+.+-...-.. ...-.+++.. ++ .|++.+|.. ...+..|++ .+........++. .........
T Consensus 292 ~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~----dg~i~v~~~-------~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 292 ATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFP----DNNLSIWSY-------SSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp TTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTT----TCEEEEEEE-------ETTEEEEEEEEECCSSCCCEEEEC
T ss_pred CCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecC----CCcEEEEec-------CCccceeEEEecCCCCCEEEEEEC
Confidence 87654322111 1111122222 33 444444533 346677775 3333444322221 222112223
Q ss_pred ECCEEEEEcCCCC
Q 016201 281 FNDRLFVVGGQEG 293 (393)
Q Consensus 281 ~~~~iyv~GG~~~ 293 (393)
-+++.++.||.++
T Consensus 359 ~dg~~l~s~~~dg 371 (401)
T 4aez_A 359 PDGRILSTAASDE 371 (401)
T ss_dssp TTSSEEEEECTTS
T ss_pred CCCCEEEEEeCCC
Confidence 3677788887664
No 116
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.44 E-value=2.9 Score=36.52 Aligned_cols=139 Identities=8% Similarity=0.024 Sum_probs=64.8
Q ss_pred eeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEEc-CCCCc--cccC-ccEEEE
Q 016201 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQM-PSAPV--PRLD-GAAIQI 127 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~-~~~~~--~r~~-~~~~~~ 127 (393)
.+.+||+.+.++..+..-..........++++-.+.+..--......+..+|+. .+...+ ..... +... ..++..
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d 125 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD 125 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC
Confidence 688999888887665430000000111223222220210000012268888887 666665 33221 1111 223222
Q ss_pred -CCEEEEEecCCC---------CCCccceEEEEECCCCceEeCCC-CCCCCCcceeEEEEe-----CC-EEEEEeceeCC
Q 016201 128 -KNLFYVFAGYGS---------LDYVHSHVDVYNFTDNKWVDRFD-MPKDMAHSHLGVVSD-----GR-YIYIVSGQYGP 190 (393)
Q Consensus 128 -~~~iyv~GG~~~---------~~~~~~~~~~yd~~~~~W~~~~~-~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~ 190 (393)
++.+|+...... .......+++||+. .+...+.. +.. ...++.. ++ .+|+...
T Consensus 126 ~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~-----~~~i~~~~~~d~dg~~l~v~~~---- 195 (314)
T 1pjx_A 126 YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF-----PNGIAVRHMNDGRPYQLIVAET---- 195 (314)
T ss_dssp TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS-----EEEEEEEECTTSCEEEEEEEET----
T ss_pred CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC-----cceEEEecccCCCCCEEEEEEC----
Confidence 577888764321 11122568999987 55544321 111 1223333 34 5777742
Q ss_pred CCCCCCCeeEEEeCC
Q 016201 191 QCRGPTSRTFVLDSE 205 (393)
Q Consensus 191 ~~~~~~~~v~~yd~~ 205 (393)
....+++||+.
T Consensus 196 ----~~~~i~~~~~~ 206 (314)
T 1pjx_A 196 ----PTKKLWSYDIK 206 (314)
T ss_dssp ----TTTEEEEEEEE
T ss_pred ----CCCeEEEEECC
Confidence 13568888875
No 117
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.42 E-value=5.5 Score=35.29 Aligned_cols=65 Identities=6% Similarity=-0.042 Sum_probs=35.4
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeC-CCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
++.+++.|+.+ ..+.+||+.+.+-... ..+... ...-.+++. -++..++.|+.+ ..+..||..
T Consensus 127 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~ 191 (366)
T 3k26_A 127 DPNLLLSVSKD------HALRLWNIQTDTLVAIFGGVEGH-RDEVLSADYDLLGEKIMSCGMD--------HSLKLWRIN 191 (366)
T ss_dssp CTTEEEEEETT------SCEEEEETTTTEEEEEECSTTSC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEESC
T ss_pred CCCEEEEEeCC------CeEEEEEeecCeEEEEecccccc-cCceeEEEECCCCCEEEEecCC--------CCEEEEECC
Confidence 45677777765 3488899987764332 111111 112223333 245566666532 347788887
Q ss_pred CC
Q 016201 206 TR 207 (393)
Q Consensus 206 ~~ 207 (393)
+.
T Consensus 192 ~~ 193 (366)
T 3k26_A 192 SK 193 (366)
T ss_dssp SH
T ss_pred CC
Confidence 64
No 118
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.41 E-value=5.2 Score=34.92 Aligned_cols=64 Identities=11% Similarity=0.139 Sum_probs=35.0
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-C--CEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+.+++.|+.+ ..+.++|+.+.+|..+..+... ...-.+++.. + +.+++.|+.+ ..+..||..
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~ 131 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFK 131 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBC
T ss_pred CCEEEEEcCC------CEEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEec
Confidence 5677777765 3578889888877655433221 0112222322 1 4566666532 346667765
Q ss_pred CC
Q 016201 206 TR 207 (393)
Q Consensus 206 ~~ 207 (393)
+.
T Consensus 132 ~~ 133 (297)
T 2pm7_B 132 EN 133 (297)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 119
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.41 E-value=6.4 Score=35.95 Aligned_cols=95 Identities=12% Similarity=0.018 Sum_probs=45.3
Q ss_pred CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCE-EEEEccCCCCCCCCCcceeEeeeec
Q 016201 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGR-LHVMGGSKENRHTPGLEHWSIAVKD 255 (393)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~~~~d 255 (393)
++++++.|+.+ ..+..||..+.+-...-.......-.+++.. ++. +++.|+.+ ..+..|++
T Consensus 258 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~---- 320 (420)
T 3vl1_A 258 YGKYVIAGHVS--------GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-----GMLAQWDL---- 320 (420)
T ss_dssp TTEEEEEEETT--------SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT-----SEEEEEET----
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC-----CeEEEEEc----
Confidence 56677777532 3488899877653221111111111122222 344 66676653 35666664
Q ss_pred cccccCC--eEEeccCCCCCCceeEEEECCEEEEEcCCCC
Q 016201 256 GKALEKA--WRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293 (393)
Q Consensus 256 ~~~~~~~--W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~ 293 (393)
.+.+ -..+...... .-.++...++++++.|+.++
T Consensus 321 ---~~~~~~~~~~~~~~~~-~v~~~~~~~~~~l~s~~~d~ 356 (420)
T 3vl1_A 321 ---RSPECPVGEFLINEGT-PINNVYFAAGALFVSSGFDT 356 (420)
T ss_dssp ---TCTTSCSEEEEESTTS-CEEEEEEETTEEEEEETTTE
T ss_pred ---CCCcCchhhhhccCCC-CceEEEeCCCCEEEEecCCc
Confidence 2221 1222111111 11233445888888888765
No 120
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.21 E-value=0.37 Score=43.87 Aligned_cols=65 Identities=3% Similarity=0.086 Sum_probs=33.8
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
..+++.|+.++ .+.++|+.+.+-...-..... .....+++. .++++++.|+.+ ..+..||..+
T Consensus 182 ~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~l~sg~~d--------g~v~~wd~~~ 246 (344)
T 4gqb_B 182 DSVFLSCSEDN------RILLWDTRCPKPASQIGCSAP-GYLPTSLAWHPQQSEVFVFGDEN--------GTVSLVDTKS 246 (344)
T ss_dssp TTEEEEEETTS------CEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETT--------SEEEEEESCC
T ss_pred CCceeeecccc------ccccccccccceeeeeeccee-eccceeeeecCCCCcceEEeccC--------CcEEEEECCC
Confidence 35777777653 478899887653322111111 011222333 256778887642 3477888876
Q ss_pred CC
Q 016201 207 RK 208 (393)
Q Consensus 207 ~~ 208 (393)
.+
T Consensus 247 ~~ 248 (344)
T 4gqb_B 247 TS 248 (344)
T ss_dssp --
T ss_pred Cc
Confidence 53
No 121
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=92.16 E-value=1.7 Score=38.82 Aligned_cols=105 Identities=6% Similarity=-0.022 Sum_probs=50.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++++++.|+.+ ..+.+||+.+.+-... +... ...-.+++. -+++.++.|+. ...+..||..+
T Consensus 43 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~s~~~--------dg~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKD------SSASVWYSLNGERLGT--LDGH-TGTIWSIDVDCFTKYCVTGSA--------DYSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESS------SCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEET--------TTEEEEEETTT
T ss_pred CCCEEEEEeCC------CEEEEEeCCCchhhhh--hhhc-CCcEEEEEEcCCCCEEEEEeC--------CCeEEEEECCC
Confidence 45667777654 3478889877654322 2211 011222333 24566666653 24588889887
Q ss_pred CCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.+-...-..+. .-..+... +++.++.++.+.......+..|++
T Consensus 106 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~ 149 (369)
T 3zwl_B 106 GQCVATWKSPV--PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEI 149 (369)
T ss_dssp CCEEEEEECSS--CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEE
T ss_pred CcEEEEeecCC--CeEEEEEccCCCEEEEecCCccCCCCEEEEEEe
Confidence 76433322111 11122222 455555554432222345666665
No 122
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.98 E-value=12 Score=38.08 Aligned_cols=100 Identities=8% Similarity=0.048 Sum_probs=56.4
Q ss_pred ceeeccCCCCCeEEcCCCC-cc------ccCccEEEE-CCE-EEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCC
Q 016201 98 TFADLPAPDLEWEQMPSAP-VP------RLDGAAIQI-KNL-FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMA 168 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~-~~------r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~ 168 (393)
-+..|++.+.+++.....+ .+ ..-.+++.. ++. |+|. ... .-+.+||+.+++++.........+
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~~------~Gl~~~d~~~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-THA------GGLSILHRNSGQVENFNQRNSQLV 450 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ETT------TEEEEEETTTCCEEEECTTTSCCS
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eCc------CceeEEeCCCCcEEEeecCCCCcC
Confidence 5788888888887765322 11 111222332 456 7763 221 247889999988877643111111
Q ss_pred -cceeEEEEe-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC
Q 016201 169 -HSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (393)
Q Consensus 169 -r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (393)
..-.+++.. ++.|++... .-+.+||+.+.+|+....
T Consensus 451 ~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~~ 488 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTL----------SALVRFNPEQRSFTTIEK 488 (795)
T ss_dssp CSCEEEEEECSSSCEEEEES----------SCEEEEETTTTEEEECCB
T ss_pred CCeeEEEEECCCCCEEEEec----------CceeEEeCCCCeEEEccc
Confidence 112233332 567777642 238899999999988753
No 123
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.79 E-value=1.2 Score=40.48 Aligned_cols=62 Identities=15% Similarity=0.176 Sum_probs=31.7
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-C-CEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+.+++.|+.+ ..+..||+.+.+-.. .+... ...-.+++.. + ..+++.|+.+ ..+..||..+
T Consensus 156 ~~~~~~~~~~------~~v~~~d~~~~~~~~--~~~~~-~~~v~~~~~~~~~~~ll~~~~~d--------g~i~i~d~~~ 218 (408)
T 4a11_B 156 HCLVAVGTRG------PKVQLCDLKSGSCSH--ILQGH-RQEILAVSWSPRYDYILATASAD--------SRVKLWDVRR 218 (408)
T ss_dssp CCEEEEEESS------SSEEEEESSSSCCCE--EECCC-CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTC
T ss_pred CcEEEEEcCC------CeEEEEeCCCcceee--eecCC-CCcEEEEEECCCCCcEEEEEcCC--------CcEEEEECCC
Confidence 3467777654 358888987654221 12111 0112223332 3 3367777543 3377788765
Q ss_pred C
Q 016201 207 R 207 (393)
Q Consensus 207 ~ 207 (393)
.
T Consensus 219 ~ 219 (408)
T 4a11_B 219 A 219 (408)
T ss_dssp S
T ss_pred C
Confidence 4
No 124
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.41 E-value=3.2 Score=44.50 Aligned_cols=135 Identities=9% Similarity=0.004 Sum_probs=66.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
+++.++.|+.+ ..+..||..+.+...+..... .-.+++...+..++.|+. ...+..||..+.
T Consensus 1014 dg~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~----~v~~~~~~~~~~l~~~~~--------dg~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1014 DGKTLISSSED------SVIQVWNWQTGDYVFLQAHQE----TVKDFRLLQDSRLLSWSF--------DGTVKVWNVITG 1075 (1249)
T ss_dssp SSSCEEEECSS------SBEEEEETTTTEEECCBCCSS----CEEEEEECSSSEEEEEES--------SSEEEEEETTTT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCceEEEecCCC----cEEEEEEcCCCcEEEEEC--------CCcEEEEECCCC
Confidence 56677777754 358889999888765443322 122333333334455543 235788888776
Q ss_pred CeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEE--ECCEE
Q 016201 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFV--FNDRL 285 (393)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~--~~~~i 285 (393)
+-...-..........+..-++++++.|+.+ ..+..|++ .+. +.+..+........++. .++++
T Consensus 1076 ~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d-----~~v~iwd~-------~~~--~~~~~l~~h~~~v~~~~~s~dg~~ 1141 (1249)
T 3sfz_A 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSAD-----KTAKIWSF-------DLL--SPLHELKGHNGCVRCSAFSLDGIL 1141 (1249)
T ss_dssp CCCEEEECCSSCCCCEEECSSSSSCEEECCS-----SCCCEECS-------SSS--SCSBCCCCCSSCEEEEEECSSSSE
T ss_pred ceeEEEcccCCcEEEEEECCCCCEEEEEcCC-----CcEEEEEC-------CCc--ceeeeeccCCCcEEEEEECCCCCE
Confidence 5321111111111112222356666776653 35666664 111 12222222111122233 37778
Q ss_pred EEEcCCCCC
Q 016201 286 FVVGGQEGD 294 (393)
Q Consensus 286 yv~GG~~~~ 294 (393)
++.|+.++.
T Consensus 1142 lat~~~dg~ 1150 (1249)
T 3sfz_A 1142 LATGDDNGE 1150 (1249)
T ss_dssp EEEEETTSC
T ss_pred EEEEeCCCE
Confidence 888887653
No 125
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=91.40 E-value=0.84 Score=40.65 Aligned_cols=104 Identities=9% Similarity=0.054 Sum_probs=53.2
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe---CCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
+++.++.|+.+ ..+.+||+.+.+...+..+..- ...-.+++.. ++.+++.|+.+ ..+..||+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~~~l~s~s~D--------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYGNILASCSYD--------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGSSCEEEEETT--------SCEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCCCEEEEEECC--------CEEEEEEC
Confidence 45677777765 3477788776654333322210 0112233332 25677777643 34778898
Q ss_pred CCCCeEeCCCCCCCCC-CceEEEE-C--CEEEEEccCCCCCCCCCcceeEe
Q 016201 205 ETRKWDSIPPLPSPRY-SPATQLW-R--GRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 205 ~~~~W~~~~~~p~~r~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.+..|..+..+..... -.+++.. + +.+++.|+.+ ..+..|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~ 134 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTY 134 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEE
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEec
Confidence 8876654432221111 1122222 2 4566776653 45666765
No 126
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.17 E-value=4.5 Score=39.91 Aligned_cols=199 Identities=9% Similarity=-0.089 Sum_probs=93.1
Q ss_pred cceeeccCC--C-CCeEEcCCCCc----cccCccEEEECCEEEEEecCCC----CCCccceEEEEECCC------CceEe
Q 016201 97 ATFADLPAP--D-LEWEQMPSAPV----PRLDGAAIQIKNLFYVFAGYGS----LDYVHSHVDVYNFTD------NKWVD 159 (393)
Q Consensus 97 ~~~~~~~~~--~-~~W~~~~~~~~----~r~~~~~~~~~~~iyv~GG~~~----~~~~~~~~~~yd~~~------~~W~~ 159 (393)
..+|.++.. . ..-.++...+. .+....+..-+++.+++...+. .......++++|+.+ .+-+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 468888876 3 55566655431 1111112223555444444321 112236799999988 66666
Q ss_pred CC-CCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCC-CC---CeEeCCCCCCCCCCceEEEE-CCEEEE
Q 016201 160 RF-DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE-TR---KWDSIPPLPSPRYSPATQLW-RGRLHV 233 (393)
Q Consensus 160 ~~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~---~W~~~~~~p~~r~~~~~~~~-~~~iyv 233 (393)
+. .-+. ........-+++..++...+.....-...+++.+|.. +. ....+..-. .......+.. ++++|+
T Consensus 182 l~~~~~~---~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 182 LSDDAHR---FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp SSCSCSS---EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEE
T ss_pred EEecCCC---cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEE
Confidence 54 3221 1111222335554444433322110113679999998 55 333332211 1111122222 677777
Q ss_pred EccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCC----C---ceeEEEE-CCEEEEEcCCCCCCCCCCCCCccc
Q 016201 234 MGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG----P---HRACFVF-NDRLFVVGGQEGDFMAKPGSPIFK 305 (393)
Q Consensus 234 ~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~----~---~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 305 (393)
.+..++ ....|. +++.+.+++.+.+..... . ....+.. ++++++.+.. +.
T Consensus 258 ~~~~~~-----~~~l~~-----~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~----------- 315 (662)
T 3azo_A 258 ATDRTG-----WWNLHR-----VDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA----------- 315 (662)
T ss_dssp EECTTS-----SCEEEE-----ECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS-----------
T ss_pred EECCCC-----CeEEEE-----EECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc-----------
Confidence 665432 112222 224567777664422111 0 0122222 6777777755 32
Q ss_pred cccccceecCceEEeC-CCCCeEECC
Q 016201 306 CSRRHEVVYGDVYMLD-DEMKWKVLP 330 (393)
Q Consensus 306 ~~~~~~~~~~~v~~yd-~~~~W~~~~ 330 (393)
..+|.+| ...+.+.+.
T Consensus 316 ---------~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 316 ---------AVLGILDPESGELVDAA 332 (662)
T ss_dssp ---------CEEEEEETTTTEEEECC
T ss_pred ---------cEEEEEECCCCcEEEec
Confidence 3488888 555666654
No 127
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=91.16 E-value=3.1 Score=36.66 Aligned_cols=131 Identities=10% Similarity=0.017 Sum_probs=65.4
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-CC-EEEEEecCCCCCCccceEEEEECCCCce-E-eCCCCCCCCCcceeE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KN-LFYVFAGYGSLDYVHSHVDVYNFTDNKW-V-DRFDMPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~-~~~~~~~~~~r~~~~ 173 (393)
.+..+|..+.+.......+.. ...++.. ++ .+|+.+..+ ..++++|+.+.+- . .+.....+ ....+
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~ 90 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDFC------QTLVQIETQLEPPKVVAIQEGQSS--MADVD 90 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEESTT------CEEEEEECSSSSCEEEEEEECSSC--CCCEE
T ss_pred eEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCCC------CeEEEEECCCCceeEEecccCCCC--ccceE
Confidence 788888888776544333211 1122222 34 577776533 3689999988774 2 22222221 21122
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CC-EEEEEccCCCCCCCCC-cceeE
Q 016201 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGGSKENRHTPG-LEHWS 250 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~-~~~~~ 250 (393)
....+..+| .+...+ ....+..||+.+.+-...- +.....+.++.. ++ .+|+.+.. ... +..|+
T Consensus 91 ~s~dg~~l~-~~~~~~-----~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~-----~~~~i~~~~ 157 (331)
T 3u4y_A 91 ITPDDQFAV-TVTGLN-----HPFNMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRS-----SANTVRRFK 157 (331)
T ss_dssp ECTTSSEEE-ECCCSS-----SSCEEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEET-----TTTEEEEEE
T ss_pred ECCCCCEEE-EecCCC-----CcccEEEEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecC-----CCceEEEEE
Confidence 222345666 432110 0237999999887654332 212122333333 34 47777543 234 55666
Q ss_pred e
Q 016201 251 I 251 (393)
Q Consensus 251 ~ 251 (393)
+
T Consensus 158 ~ 158 (331)
T 3u4y_A 158 I 158 (331)
T ss_dssp E
T ss_pred E
Confidence 4
No 128
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.14 E-value=7.3 Score=34.06 Aligned_cols=24 Identities=8% Similarity=-0.008 Sum_probs=16.5
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCce
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGV 63 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W 63 (393)
++.+.+.|+. ++ .+..||..+..-
T Consensus 24 ~~~~l~s~~~-dg-------~v~lWd~~~~~~ 47 (304)
T 2ynn_A 24 TEPWVLTTLY-SG-------RVELWNYETQVE 47 (304)
T ss_dssp SSSEEEEEET-TS-------EEEEEETTTTEE
T ss_pred CCCEEEEEcC-CC-------cEEEEECCCCce
Confidence 4556667776 66 788888876653
No 129
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.05 E-value=1.6 Score=40.17 Aligned_cols=104 Identities=12% Similarity=-0.031 Sum_probs=51.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe-----CCCCCCCCCcceeEEEEe-CC-EEEEEeceeCCCCCCCCCeeE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RFDMPKDMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTF 200 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~ 200 (393)
++.+++.|+.+ ..+.+||..++.... +..+... ...-.+++.. ++ .+++.|+.+ ..+.
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~d--------g~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCD--------NVIL 157 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCC--------CEEE
Confidence 56788888765 358888988775421 1111110 1112223332 33 467776543 3488
Q ss_pred EEeCCCCCeEeCCC-CCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 201 VLDSETRKWDSIPP-LPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 201 ~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.||..+.+....-. ......-.+++.. ++.+++.|+.+ ..+..|++
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~ 205 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEP 205 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEET
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeC
Confidence 89988775432211 1111111222222 56666676653 35666664
No 130
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=90.89 E-value=4.7 Score=36.51 Aligned_cols=103 Identities=12% Similarity=-0.020 Sum_probs=53.5
Q ss_pred EECCEEEEEecCCCCCCccceEEEEECCCCc-------eEeCCCCCCCCCcceeEEEE-eC----C---EEEEEeceeCC
Q 016201 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK-------WVDRFDMPKDMAHSHLGVVS-DG----R---YIYIVSGQYGP 190 (393)
Q Consensus 126 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-------W~~~~~~~~~~~r~~~~~~~-~~----~---~iyv~GG~~~~ 190 (393)
.+...+++.|+.+ ..+.+||+.+.+ -..+..... .-.+++. -+ + .+++.|+.+
T Consensus 23 ~~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~g~~~~~l~s~~~d-- 90 (397)
T 1sq9_A 23 SACNSFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHFVHKS----GLHHVDVLQAIERDAFELCLVATTSFS-- 90 (397)
T ss_dssp EECSSEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEECCTT----CEEEEEEEEEEETTTEEEEEEEEEETT--
T ss_pred EecCCeEEEEcCC------CEEEEEECCCcccccCCCcceEEecCCC----cEEEEEEecccccCCccccEEEEEcCC--
Confidence 3344677777765 357888887765 222222111 1122222 33 6 777777643
Q ss_pred CCCCCCCeeEEEeCCCCC------eEeCCCCCCC---CCCceEEEE-----CCEE-EEEccCCCCCCCCCcceeEe
Q 016201 191 QCRGPTSRTFVLDSETRK------WDSIPPLPSP---RYSPATQLW-----RGRL-HVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 191 ~~~~~~~~v~~yd~~~~~------W~~~~~~p~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~~~~~ 251 (393)
..+..||..+.. +..+...+.. ..-.++... ++.. ++.|+.+ ..+..|++
T Consensus 91 ------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~ 155 (397)
T 1sq9_A 91 ------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKF 155 (397)
T ss_dssp ------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEE
T ss_pred ------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeC
Confidence 347778877666 6665543311 122233333 4555 7777653 46677776
No 131
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.61 E-value=0.85 Score=49.06 Aligned_cols=65 Identities=5% Similarity=0.040 Sum_probs=34.4
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
+++.++.|+.++ .+..||..+.+ .+..+..............++++.+.|+.++ .+..||..+.
T Consensus 1096 d~~~l~s~s~d~------~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg--------~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1096 DATKFSSTSADK------TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNG--------EIRIWNVSDG 1159 (1249)
T ss_dssp SSSSCEEECCSS------CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTS--------CCCEEESSSS
T ss_pred CCCEEEEEcCCC------cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCC--------EEEEEECCCC
Confidence 566777777653 36677776554 2333322111112222234677777776433 3667887765
Q ss_pred C
Q 016201 208 K 208 (393)
Q Consensus 208 ~ 208 (393)
+
T Consensus 1160 ~ 1160 (1249)
T 3sfz_A 1160 Q 1160 (1249)
T ss_dssp C
T ss_pred c
Confidence 4
No 132
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.43 E-value=6.3 Score=34.37 Aligned_cols=65 Identities=12% Similarity=0.137 Sum_probs=33.6
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCC-------ceEeCCCCCCCCCcceeEEEEe-C--CEEEEEeceeCCCCCCCCCe
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDN-------KWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSR 198 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~-------~W~~~~~~~~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~ 198 (393)
+.+++.|+.++ .+.+||+.+. .|+.+..+... ...-.+++.. + +.+++.|+. ...
T Consensus 71 ~~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~--------dg~ 135 (351)
T 3f3f_A 71 GRIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTLNDS-KGSLYSVKFAPAHLGLKLACLGN--------DGI 135 (351)
T ss_dssp CSEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEET--------TCE
T ss_pred CCEEEEEcCCC------eEEEEecCCCcccccccCcceeeeeccc-CCceeEEEEcCCCCCcEEEEecC--------CCc
Confidence 66777887653 4677777653 33433333221 1112233332 2 556666653 245
Q ss_pred eEEEeCCCCC
Q 016201 199 TFVLDSETRK 208 (393)
Q Consensus 199 v~~yd~~~~~ 208 (393)
+..||..+.+
T Consensus 136 v~iwd~~~~~ 145 (351)
T 3f3f_A 136 LRLYDALEPS 145 (351)
T ss_dssp EEEEECSSTT
T ss_pred EEEecCCChH
Confidence 7788876643
No 133
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.16 E-value=8.3 Score=33.11 Aligned_cols=93 Identities=10% Similarity=0.056 Sum_probs=48.2
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++.|||.+... ...+.+||+..+.-..+..... ....++++ -++++|+.... ...+.+||+..
T Consensus 88 ~g~l~v~~~~~-----~~~i~~~d~~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g 151 (286)
T 1q7f_A 88 SGDIIVTERSP-----THQIQIYNQYGQFVRKFGATIL---QHPRGVTVDNKGRIIVVECK--------VMRVIIFDQNG 151 (286)
T ss_dssp TTEEEEEECGG-----GCEEEEECTTSCEEEEECTTTC---SCEEEEEECTTSCEEEEETT--------TTEEEEECTTS
T ss_pred CCeEEEEcCCC-----CCEEEEECCCCcEEEEecCccC---CCceEEEEeCCCCEEEEECC--------CCEEEEEcCCC
Confidence 67899986421 2458889966554443322111 11233443 36788887531 35688999876
Q ss_pred CCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016201 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (393)
.....+........-..+++. +++||+...
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 544433211111111122222 578888754
No 134
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.12 E-value=6.2 Score=34.51 Aligned_cols=99 Identities=6% Similarity=-0.030 Sum_probs=51.1
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCC--CCCcceeE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK--DMAHSHLG 173 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~ 173 (393)
..+++||+.+.+-..... +. .-.+++.. ++++|+..+ ..+.+||+.+.+++.+...+. +..+....
T Consensus 35 ~~i~~~d~~~~~~~~~~~-~~--~~~~i~~~~dG~l~v~~~--------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di 103 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTM-DA--PVSSVALRQSGGYVATIG--------TKFCALNWKEQSAVVLATVDNDKKNNRFNDG 103 (297)
T ss_dssp TEEEEEETTTCCEEEEEC-SS--CEEEEEEBTTSSEEEEET--------TEEEEEETTTTEEEEEEECCTTCSSEEEEEE
T ss_pred CEEEEEECCCCcEEEEeC-CC--ceEEEEECCCCCEEEEEC--------CeEEEEECCCCcEEEEEecCCCCCCCCCCCE
Confidence 367888887765433221 11 11122222 566666431 458999999998887654432 11222323
Q ss_pred EEEeCCEEEEEeceeCCC---CCCCCCeeEEEeCCC
Q 016201 174 VVSDGRYIYIVSGQYGPQ---CRGPTSRTFVLDSET 206 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~---~~~~~~~v~~yd~~~ 206 (393)
.+.-++++|+..-..... .......++++|+..
T Consensus 104 ~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 104 KVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp EECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred EECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 333467887743211100 001245789998864
No 135
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.11 E-value=4.7 Score=37.25 Aligned_cols=95 Identities=9% Similarity=0.048 Sum_probs=43.5
Q ss_pred eeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEEcCCCCccccCccEEEECCEE
Q 016201 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLF 131 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~i 131 (393)
+|..||..+..-..+-.+... ...-.+++...+............+..+|..+.+- +..+........+...++.+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~--~~~~~~h~~~v~~~s~~~~~ 201 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR--LRNMTSHSARVGSLSWNSYI 201 (420)
T ss_dssp EEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTE
T ss_pred EEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE--EEEEeCCCCceEEEeeCCCE
Confidence 677888777765554333221 01112222222211111111233566777665432 21122222223334556777
Q ss_pred EEEecCCCCCCccceEEEEECCCCc
Q 016201 132 YVFAGYGSLDYVHSHVDVYNFTDNK 156 (393)
Q Consensus 132 yv~GG~~~~~~~~~~~~~yd~~~~~ 156 (393)
++.|+.+ ..+..+|.....
T Consensus 202 l~sgs~d------~~i~~~d~~~~~ 220 (420)
T 4gga_A 202 LSSGSRS------GHIHHHDVRVAE 220 (420)
T ss_dssp EEEEETT------SEEEEEETTSSS
T ss_pred EEEEeCC------CceeEeeecccc
Confidence 7777765 346667766543
No 136
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.89 E-value=3 Score=37.81 Aligned_cols=128 Identities=13% Similarity=0.046 Sum_probs=63.4
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCE-EEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNL-FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 174 (393)
.++.+|..+.+...+.. ........... +++ |+.+.. .........++.+|+.+.+++.+.. ..+ .......
T Consensus 169 ~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~ 243 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAE-GESCTHE 243 (396)
T ss_dssp EEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCT-TEEEEEE
T ss_pred eEEEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCC-Cccccce
Confidence 67888887776655542 11111122222 244 444432 2211122568999998888777654 211 1111122
Q ss_pred E-EeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEcc
Q 016201 175 V-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (393)
Q Consensus 175 ~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 236 (393)
+ .-+++.+++...... .....++++|+.+.+.+.+...+. .. ....- +++++++.+
T Consensus 244 ~~spdg~~l~~~~~~~~---~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKG---QTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EECTTSSCEEEEEEETT---TCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEE
T ss_pred EECCCCCEEEEEecCCC---CccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEec
Confidence 2 235543333333221 112459999999887766654442 11 22233 677666654
No 137
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=89.53 E-value=1.9 Score=38.95 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=46.0
Q ss_pred EEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCe
Q 016201 131 FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (393)
Q Consensus 131 iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (393)
.+.+|.+.....-.-.++.+|+.+.+.+.+..... ......+..- +..||+.+..... ...-.++.+|..+.+.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~--~~p~~l~~spdg~~l~~~~~~~~~---~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV--ANPSYLIPSADGKFVYSVNEFSKD---QAAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC--SCCCSEEECTTSSEEEEEECCSST---TCEEEEEEEETTTTEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC--CCCceEEECCCCCEEEEEEccCCC---CCcEEEEEEeCCCCcE
Confidence 34456654433212346667888888877654411 1212222223 4457776542111 0122345556665666
Q ss_pred EeCCCCCCCCCCceEEEECCE-EEEEc
Q 016201 210 DSIPPLPSPRYSPATQLWRGR-LHVMG 235 (393)
Q Consensus 210 ~~~~~~p~~r~~~~~~~~~~~-iyv~G 235 (393)
+.+...+........+..+++ ||+..
T Consensus 90 ~~~~~~~~~~~~p~~~~~dg~~l~~~~ 116 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTTNGKNIVTAN 116 (361)
T ss_dssp EEEEEEECSSSCEEEEEECSSEEEEEE
T ss_pred EEeeEeccCCCCcEEEEECCCEEEEEE
Confidence 666543322222222222554 55554
No 138
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.35 E-value=10 Score=32.93 Aligned_cols=213 Identities=10% Similarity=-0.069 Sum_probs=97.9
Q ss_pred cEEEEecCCCCCCCCcccceeeeeecCCCc--eEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCC-Ce
Q 016201 33 DFMWASSSSSFSSSSAHLSVASNWALEKSG--VVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDL-EW 109 (393)
Q Consensus 33 ~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~W 109 (393)
+.+++.|.. ++ .+..+|+++.+ |..-..-. ...+.+.+..+....- .....+..+|+... .|
T Consensus 5 ~~~lv~~~~-~~-------~v~~~d~~tG~~~w~~~~~~~-----~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G~~~W 69 (276)
T 3no2_A 5 QHLLVGGSG-WN-------KIAIINKDTKEIVWEYPLEKG-----WECNSVAATKAGEILF--SYSKGAKMITRDGRELW 69 (276)
T ss_dssp CEEEEECTT-CS-------EEEEEETTTTEEEEEEECCTT-----CCCCEEEECTTSCEEE--ECBSEEEEECTTSCEEE
T ss_pred CcEEEeeCC-CC-------EEEEEECCCCeEEEEeCCCcc-----CCCcCeEECCCCCEEE--eCCCCEEEECCCCCEEE
Confidence 566667655 44 67888876654 65433210 1123333332221111 12346888988332 57
Q ss_pred EEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCc-eEeC--CCCCCCCCcceeEEEEeCCEEEEEe
Q 016201 110 EQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDR--FDMPKDMAHSHLGVVSDGRYIYIVS 185 (393)
Q Consensus 110 ~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~--~~~~~~~~r~~~~~~~~~~~iyv~G 185 (393)
+...+... ..+++..+ ++++++....+ ...+..+|+..+. |+.- ...+.+...........++.+++..
T Consensus 70 ~~~~~~~~--~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 70 NIAAPAGC--EMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp EEECCTTC--EEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred EEcCCCCc--cccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 65442111 11223222 56666664421 1357778875542 4321 1111110111222334456666654
Q ss_pred ceeCCCCCCCCCeeEEEeCCCCC-eEeCCCCCCCCCCceEEE-ECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCe
Q 016201 186 GQYGPQCRGPTSRTFVLDSETRK-WDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAW 263 (393)
Q Consensus 186 G~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W 263 (393)
. ....+.+||++-+. |+.-.+. ..+++.. .++.+++.+... ..+..+ |.+...-.|
T Consensus 143 ~--------~~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~-----~~v~~~-----d~~tG~~~w 200 (276)
T 3no2_A 143 F--------ATSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGDA-----HCFVQL-----NLESNRIVR 200 (276)
T ss_dssp T--------TTTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBTT-----SEEEEE-----CTTTCCEEE
T ss_pred c--------CCCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCCC-----CeEEEE-----eCcCCcEEE
Confidence 2 14568999987332 6654321 1123333 367788776432 122222 322234457
Q ss_pred EEecc-CCCCCC-c-eeEEE-ECCEEEEEc
Q 016201 264 RTEIP-IPRGGP-H-RACFV-FNDRLFVVG 289 (393)
Q Consensus 264 ~~~~~-~p~~~~-~-~~~~~-~~~~iyv~G 289 (393)
+.-.. ++..+. . .++.. .++.+||..
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 66432 221121 1 22333 388899887
No 139
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.07 E-value=1.7 Score=38.76 Aligned_cols=100 Identities=11% Similarity=0.091 Sum_probs=51.1
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEe-CCCCCCCCCcceeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+.+++.|+.+ ..+.+||+.+.+-.. +.... ..-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~ 146 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYVGHG----NAINELKFHPRDPNLLLSVSKD--------HALRLWNIQ 146 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEESCC----SCEEEEEECSSCTTEEEEEETT--------SCEEEEETT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeecCCC----CcEEEEEECCCCCCEEEEEeCC--------CeEEEEEee
Confidence 5678888765 358888987765322 11111 112233332 56677777642 348889988
Q ss_pred CCCeEeC-CCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 206 TRKWDSI-PPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 206 ~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+.+-... ..+.........+.. ++..++.|+.+ ..+..|++
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~ 190 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRI 190 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEES
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEEC
Confidence 7654332 111111122222222 45566666653 35566664
No 140
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.04 E-value=5.3 Score=35.98 Aligned_cols=82 Identities=11% Similarity=0.128 Sum_probs=38.2
Q ss_pred CeeEEEeCCCCCeEeCCCCCCCCCCceEEEE----CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCC
Q 016201 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQLW----RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRG 272 (393)
Q Consensus 197 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~ 272 (393)
..+..||+.+.+-... +........++.+ ++.+++.|+.+ ..+..|++ .+.+.... +...
T Consensus 176 ~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~-------~~~~~~~~--~~~h 239 (354)
T 2pbi_B 176 GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCD-----KKAMVWDM-------RSGQCVQA--FETH 239 (354)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETT-----SCEEEEET-------TTCCEEEE--ECCC
T ss_pred CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCC-----CeEEEEEC-------CCCcEEEE--ecCC
Confidence 4578888887654221 1100011111111 34677777764 46677774 33332221 1111
Q ss_pred CCceeEEEE--CCEEEEEcCCCCC
Q 016201 273 GPHRACFVF--NDRLFVVGGQEGD 294 (393)
Q Consensus 273 ~~~~~~~~~--~~~iyv~GG~~~~ 294 (393)
.....++.+ ++..++.|+.++.
T Consensus 240 ~~~v~~v~~~p~~~~l~s~s~D~~ 263 (354)
T 2pbi_B 240 ESDVNSVRYYPSGDAFASGSDDAT 263 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCeEEEEEeCCCCEEEEEeCCCe
Confidence 111223333 5677888877653
No 141
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=88.91 E-value=12 Score=33.17 Aligned_cols=218 Identities=7% Similarity=-0.025 Sum_probs=101.6
Q ss_pred eeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCC--CeEEcCCCC-----cc-ccC-c
Q 016201 52 VASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDL--EWEQMPSAP-----VP-RLD-G 122 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~W~~~~~~~-----~~-r~~-~ 122 (393)
.+..+|+.+.+-........ .....++++-.+...-..+..+..+..+++... .-..+.... .. ... .
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~---~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL---FYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT---CSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred cEEEEECCCCeEEeccCCCc---cCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence 58888887666543211100 012234444322211111222346888887654 122222110 00 111 2
Q ss_pred cEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCC-------CCCCCcceeEEEEe-C-CEEEEEeceeCCC
Q 016201 123 AAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM-------PKDMAHSHLGVVSD-G-RYIYIVSGQYGPQ 191 (393)
Q Consensus 123 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~ 191 (393)
.+++. ++.|||..+.. ...+.+||+....-..+... +... ..-.++++. + +.|||...
T Consensus 147 ~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~----- 215 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADR----- 215 (329)
T ss_dssp EEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEET-----
T ss_pred EEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEEC-----
Confidence 23333 57899987521 24688999765544333211 1111 123344543 3 89999963
Q ss_pred CCCCCCeeEEEeCCCCCeEeC-CCCCCCCCCceEEEECCEEEEEccCCC--CCCCCCcceeEeeeeccccccCCeEE-ec
Q 016201 192 CRGPTSRTFVLDSETRKWDSI-PPLPSPRYSPATQLWRGRLHVMGGSKE--NRHTPGLEHWSIAVKDGKALEKAWRT-EI 267 (393)
Q Consensus 192 ~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~~~~~d~~~~~~~W~~-~~ 267 (393)
....+.+||+.+.+.... ........-..++...+.+|+..|... ......+..|+. .+.+... +.
T Consensus 216 ---~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~-------~~g~~~~~~~ 285 (329)
T 3fvz_A 216 ---ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNF-------SSGEIIDVFK 285 (329)
T ss_dssp ---TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEET-------TTCCEEEEEC
T ss_pred ---CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEc-------CCCeEEEEEc
Confidence 146799999986665432 211122222234444577777766422 111234444442 3444333 22
Q ss_pred cCCCCCCceeEEEE--CCEEEEEcCCCC
Q 016201 268 PIPRGGPHRACFVF--NDRLFVVGGQEG 293 (393)
Q Consensus 268 ~~p~~~~~~~~~~~--~~~iyv~GG~~~ 293 (393)
+.+........+++ ++.|||....++
T Consensus 286 ~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 286 PVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp CSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred CCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 22222222333333 678999876543
No 142
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.77 E-value=2.8 Score=37.93 Aligned_cols=102 Identities=14% Similarity=0.212 Sum_probs=51.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-e-CCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-D-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+++.++.|+.++ .+.++|+.+++-.. .+..- ...-.+++. . +..+++.|+.+ ..+..||..
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~--~~~~h-~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLS--SYRAH-AAQVTCVAASPHKDSVFLSCSED--------NRILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEE--EECCC-SSCEEEEEECSSCTTEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEE--EEcCc-CCceEEEEecCCCCCceeeeccc--------ccccccccc
Confidence 567778887653 47889988775322 22210 011122222 2 34577777643 347788988
Q ss_pred CCCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceeEe
Q 016201 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+.+-...-..........++.. ++++++.|+.+ ..+..||+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~ 244 (344)
T 4gqb_B 201 CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDT 244 (344)
T ss_dssp SSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-----SEEEEEES
T ss_pred ccceeeeeecceeeccceeeeecCCCCcceEEeccC-----CcEEEEEC
Confidence 7654322111111111122222 45677777654 35666664
No 143
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=88.50 E-value=15 Score=33.86 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=100.0
Q ss_pred CCeEE--cCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEEC-----CCCce-EeCCCCCCCCCcceeEEEEeC
Q 016201 107 LEWEQ--MPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-----TDNKW-VDRFDMPKDMAHSHLGVVSDG 178 (393)
Q Consensus 107 ~~W~~--~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-----~~~~W-~~~~~~~~~~~r~~~~~~~~~ 178 (393)
+.|++ |+..|....-|+.+.+++.-|++|=.++.-.+..--..|-+ ....- +.++.- ......-.++-.++
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~se-y~~~AsEPCvkyYd 348 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSE-YEPDASEPCIKYYD 348 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGG-GCTTEEEEEEEEET
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhh-hccccccchhhhhC
Confidence 45633 44455445568889999888899866554332222222321 11111 223221 11234556777889
Q ss_pred CEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC-CCCCCCCCceEEEECCEEEEEccCCC----------CCCC---C
Q 016201 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP-PLPSPRYSPATQLWRGRLHVMGGSKE----------NRHT---P 244 (393)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~----------~~~~---~ 244 (393)
+++|+.---.... .+-+.+.+-+.....|+.+. |-.........+.+++.||+||-... .+|. +
T Consensus 349 gvLyLtTRgt~~~--~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~yP 426 (670)
T 3ju4_A 349 GVLYLITRGTRGD--RLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKASYP 426 (670)
T ss_dssp TEEEEEEEESCTT--SCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCBCC
T ss_pred CEEEEEecCcCCC--CCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcccccccCC
Confidence 9999986322221 34577888888888998875 22334455567889999999986421 1121 1
Q ss_pred CcceeEeeeeccccccCCeEEecc------CCCCCCcee-EEEECCEE-EEEcCCC
Q 016201 245 GLEHWSIAVKDGKALEKAWRTEIP------IPRGGPHRA-CFVFNDRL-FVVGGQE 292 (393)
Q Consensus 245 ~~~~~~~~~~d~~~~~~~W~~~~~------~p~~~~~~~-~~~~~~~i-yv~GG~~ 292 (393)
....-.+.+-+...+.-+|..+.. ......+.+ +|+-++-| |+|||.+
T Consensus 427 RtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 427 RTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp EEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred ceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 111222223333345556766543 122223333 44457766 5688865
No 144
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=88.26 E-value=9.8 Score=36.01 Aligned_cols=49 Identities=12% Similarity=0.096 Sum_probs=30.2
Q ss_pred cceeeccCCCCCeEEc--CCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCc
Q 016201 97 ATFADLPAPDLEWEQM--PSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK 156 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 156 (393)
+..|.||..+++.... +.+| . --++....+++|++-| +..++||+.+.+
T Consensus 167 ~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG--------~~y~rfd~~~~~ 217 (460)
T 1qhu_A 167 NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG--------NQFLRFNPVSGE 217 (460)
T ss_dssp TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET--------TEEEEECTTTCC
T ss_pred ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC--------CEEEEEcCccCc
Confidence 3567888776544321 1222 2 3455556799999987 457888876553
No 145
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=88.18 E-value=4.4 Score=35.07 Aligned_cols=63 Identities=10% Similarity=0.024 Sum_probs=31.9
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
++..++.|+.++ .+..||.....- .+..... .........-++. ++.|+. ...+..||..+.
T Consensus 154 ~~~~l~~~~~d~------~i~i~d~~~~~~-~~~~~~~--~~i~~~~~~~~~~-~~~~~~--------dg~i~i~d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASADK------TIKLWQNDKVIK-TFSGIHN--DVVRHLAVVDDGH-FISCSN--------DGLIKLVDMHTG 215 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTEEEE-EECSSCS--SCEEEEEEEETTE-EEEEET--------TSEEEEEETTTC
T ss_pred CCCEEEEEECCC------CEEEEecCceEE-EEeccCc--ccEEEEEEcCCCe-EEEccC--------CCeEEEEECCch
Confidence 566677777543 477788332222 2221111 1222223334666 556543 345888888765
Q ss_pred C
Q 016201 208 K 208 (393)
Q Consensus 208 ~ 208 (393)
+
T Consensus 216 ~ 216 (313)
T 3odt_A 216 D 216 (313)
T ss_dssp C
T ss_pred h
Confidence 4
No 146
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=88.04 E-value=4.8 Score=38.76 Aligned_cols=98 Identities=8% Similarity=0.035 Sum_probs=46.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++.++.|+.+ ..+..||...+.-..+..... . -.+++. -+++.++.++.+ ..+..||...
T Consensus 396 dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~---~-v~~~~~s~d~~~l~~~~~d--------~~v~~w~~~~ 457 (577)
T 2ymu_A 396 DGQTIASASDD------KTVKLWNRNGQLLQTLTGHSS---S-VWGVAFSPDDQTIASASDD--------KTVKLWNRNG 457 (577)
T ss_dssp TSSCEEEEETT------SEEEEECTTCCEEEEEECCSS---C-EEEEEECTTSSEEEEEETT--------SEEEEEETTS
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCEEEEecCCCC---C-eEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 55666777654 347778865544333322221 1 122232 356666666532 3477778654
Q ss_pred CCeEeCCCCCCCCCCceEEE-ECCEEEEEccCCCCCCCCCcceeE
Q 016201 207 RKWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWS 250 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 250 (393)
..-..+..... .-.+++. -++++++.|+.+ ..+..|+
T Consensus 458 ~~~~~~~~~~~--~v~~~~~spd~~~las~~~d-----~~i~iw~ 495 (577)
T 2ymu_A 458 QLLQTLTGHSS--SVRGVAFSPDGQTIASASDD-----KTVKLWN 495 (577)
T ss_dssp CEEEEEECCSS--CEEEEEECTTSCEEEEEETT-----SEEEEEE
T ss_pred CEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCC-----CEEEEEc
Confidence 43333222111 1112222 256677776653 3455555
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=87.66 E-value=14 Score=32.42 Aligned_cols=157 Identities=8% Similarity=-0.046 Sum_probs=70.9
Q ss_pred hhccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCc-chhhHHhhcceeeccCCCCC
Q 016201 30 LIADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKG-QDAERFLSATFADLPAPDLE 108 (393)
Q Consensus 30 ~~~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 108 (393)
..++.+|+.++. ++ .+..+|+.+.+....-..+.. ....++++..+.. .-.....+..++.+|..+.+
T Consensus 8 ~~~~~~~v~~~~-~~-------~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 8 KAGHEYMIVTNY-PN-------NLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CTTCEEEEEEET-TT-------EEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cCCCEEEEEeCC-CC-------eEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 346778888876 55 788999887765432222220 0112222221111 00011123468888887765
Q ss_pred eEEcCCCCc-----cccCccEEEE-CC-EEEEEecC--CCCCC---ccceEEEEECCCCceEe-CCCCCCCCCcceeEEE
Q 016201 109 WEQMPSAPV-----PRLDGAAIQI-KN-LFYVFAGY--GSLDY---VHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVV 175 (393)
Q Consensus 109 W~~~~~~~~-----~r~~~~~~~~-~~-~iyv~GG~--~~~~~---~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~ 175 (393)
-......+. ...-..++.. ++ .||+.+.. ..... ....+.+||+.+.+-.. +...+.+. .......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~ 155 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLMRA 155 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SCCCEEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-cccceeE
Confidence 432212211 1111233332 34 56655421 00000 02568999988743211 11111221 1111122
Q ss_pred EeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCe
Q 016201 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (393)
Q Consensus 176 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (393)
.-++++|+.++ ++.++|+.+.+-
T Consensus 156 s~dg~l~~~~~-----------~i~~~d~~~~~~ 178 (349)
T 1jmx_B 156 ADDGSLYVAGP-----------DIYKMDVKTGKY 178 (349)
T ss_dssp CTTSCEEEESS-----------SEEEECTTTCCE
T ss_pred CCCCcEEEccC-----------cEEEEeCCCCce
Confidence 34566777431 277888877654
No 148
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=87.63 E-value=20 Score=34.34 Aligned_cols=130 Identities=8% Similarity=0.054 Sum_probs=65.5
Q ss_pred CEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeecc
Q 016201 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDG 256 (393)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~ 256 (393)
++.++.|+.. ...+..||..+..... ..+.........+.+ ++++++.|+.+ ..+..|++
T Consensus 456 ~~~l~~~~~~-------d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d-----g~i~iw~~----- 517 (615)
T 1pgu_A 456 QNYVAVGLEE-------GNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM-----GKILLYDL----- 517 (615)
T ss_dssp SSEEEEEETT-------TSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET-----
T ss_pred CCEEEEeecC-------CCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC-----CeEEEeeC-----
Confidence 5566666430 2348889988765532 222222222223333 67777777764 45666764
Q ss_pred ccccCCeEEeccCCC-CCCceeEEEE------------CCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-C
Q 016201 257 KALEKAWRTEIPIPR-GGPHRACFVF------------NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-D 322 (393)
Q Consensus 257 ~~~~~~W~~~~~~p~-~~~~~~~~~~------------~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~ 322 (393)
.+ .+.+..+.. .......+.+ ++++++.|+.++. |..|| .
T Consensus 518 --~~--~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~----------------------i~iw~~~ 571 (615)
T 1pgu_A 518 --QS--REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN----------------------IFIYSVK 571 (615)
T ss_dssp --TT--TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC----------------------EEEEESS
T ss_pred --CC--CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCc----------------------EEEEECC
Confidence 22 222322222 1222233333 6788888887653 77777 4
Q ss_pred CC--CeEECCCCCCCCCCcceeEEEECCEEEEEcCc
Q 016201 323 EM--KWKVLPPMPKPNSHIECAWVIVNNSIIITGGT 356 (393)
Q Consensus 323 ~~--~W~~~~~~~~~r~~~~~~~~~~~~~i~v~GG~ 356 (393)
.. ....+... ...........+++ ++.+|.
T Consensus 572 ~~~~~~~~~~~h---~~~v~~l~~s~~~~-l~s~~~ 603 (615)
T 1pgu_A 572 RPMKIIKALNAH---KDGVNNLLWETPST-LVSSGA 603 (615)
T ss_dssp CTTCCEEETTSS---TTCEEEEEEEETTE-EEEEET
T ss_pred CCceechhhhcC---ccceEEEEEcCCCC-eEEecC
Confidence 32 33333221 22222333556888 777664
No 149
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=87.13 E-value=15 Score=33.05 Aligned_cols=65 Identities=2% Similarity=-0.039 Sum_probs=37.0
Q ss_pred ceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC
Q 016201 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (393)
Q Consensus 145 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (393)
..++.+|+.+.+-+.+...+. ........- +++..++....... .....++.+|+.+...+.+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ---WLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCCc---cccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCCCCceEEeee
Confidence 679999999887666543222 222233333 45544443322111 124579999998877666654
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.05 E-value=16 Score=36.33 Aligned_cols=56 Identities=9% Similarity=-0.000 Sum_probs=30.3
Q ss_pred cceeeccCCCC---CeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCC
Q 016201 97 ATFADLPAPDL---EWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD 162 (393)
Q Consensus 97 ~~~~~~~~~~~---~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~ 162 (393)
..++.+|..+. .-..+.... .....+.+ +++.++++.. ..++++|+.+.+...+..
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~---~~~~~~~~SPDG~~la~~~~-------~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGE---GFATDAKLSPKGGFVSFIRG-------RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSS---SCEEEEEECTTSSEEEEEET-------TEEEEEETTTTEEEECCC
T ss_pred CcEEEEECCCCCcceEEEcccCC---cccccccCCCCCCEEEEEeC-------CcEEEEecCCCCEEEecc
Confidence 47788887665 333332211 11111222 5555555432 369999999888776644
No 151
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=87.02 E-value=5.4 Score=40.32 Aligned_cols=100 Identities=9% Similarity=0.154 Sum_probs=49.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeC-CCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+++.+++|+.+ ..+.+||..+.+.... ..... . -.+++. -++...+.|+. ...+..||..
T Consensus 66 ~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~---~-v~~~~~s~~~~~l~~~~~--------dg~i~vw~~~ 127 (814)
T 3mkq_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHPD---Y-IRSIAVHPTKPYVLSGSD--------DLTVKLWNWE 127 (814)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECCSS---C-EEEEEECSSSSEEEEEET--------TSEEEEEEGG
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEecCCC---C-EEEEEEeCCCCEEEEEcC--------CCEEEEEECC
Confidence 55667777754 3588899888765432 21111 1 122222 35555556542 2457888887
Q ss_pred CCCeEeCCCCC-CCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 206 TRKWDSIPPLP-SPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 206 ~~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+. |.....+. ....-.+++.. ++.+++.|+.+ ..+..|++
T Consensus 128 ~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~ 170 (814)
T 3mkq_A 128 NN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSL 170 (814)
T ss_dssp GT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT-----SEEEEEET
T ss_pred CC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC-----CeEEEEEC
Confidence 65 22222111 11112223333 45677777654 34556654
No 152
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=86.97 E-value=4.8 Score=36.35 Aligned_cols=114 Identities=12% Similarity=0.043 Sum_probs=56.2
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~ 175 (393)
..++.+|..+.+-+.+..-+. +..+....- +++.+++............++.+|+.+...+.+....... .......
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~-~~~~~~~ 245 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGE-SCTHEFW 245 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTE-EEEEEEE
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCc-ccccceE
Confidence 468888887766544432111 111222222 4454444333222222357999999888777665433210 1111122
Q ss_pred EeCCE-EEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCC
Q 016201 176 SDGRY-IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP 216 (393)
Q Consensus 176 ~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p 216 (393)
.-+++ |+.... ... .....++++|+.+.+-+.+..++
T Consensus 246 spdg~~l~~~~~-~~~---~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 246 VPDGSALVYVSY-LKG---SPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp CTTSSCEEEEEE-ETT---CCCEEEEEECTTTCCEEEEEEEC
T ss_pred CCCCCEEEEEec-CCC---CCcceEEEEecCCCceEEEEcCC
Confidence 23554 544432 211 11235999999998866654433
No 153
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=86.93 E-value=15 Score=31.92 Aligned_cols=22 Identities=14% Similarity=0.218 Sum_probs=14.6
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCc
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNK 156 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 156 (393)
+.+++.|+.+ ..+.+||+.+.+
T Consensus 124 ~~~l~~~~~d------g~v~iwd~~~~~ 145 (351)
T 3f3f_A 124 GLKLACLGND------GILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEETT------CEEEEEECSSTT
T ss_pred CcEEEEecCC------CcEEEecCCChH
Confidence 5667777754 357888876654
No 154
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=86.78 E-value=4.2 Score=37.85 Aligned_cols=101 Identities=6% Similarity=0.034 Sum_probs=51.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEE-EeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++.+++.|+.++ .+.++|+.++.-..+...... .....+++ .-++++++.|+.+ ..+..||...
T Consensus 176 ~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~d--------g~i~~wd~~~ 240 (435)
T 4e54_B 176 NTNQFYASSMEG------TTRLQDFKGNILRVFASSDTI-NIWFCSLDVSASSRMVVTGDNV--------GNVILLNMDG 240 (435)
T ss_dssp CTTEEEEECSSS------CEEEEETTSCEEEEEECCSSC-SCCCCCEEEETTTTEEEEECSS--------SBEEEEESSS
T ss_pred CCCEEEEEeCCC------EEEEeeccCCceeEEeccCCC-CccEEEEEECCCCCEEEEEeCC--------CcEeeeccCc
Confidence 456777777653 477889988766554332221 11122222 3466777777643 3477888765
Q ss_pred CCeEeCCCCCCCCCCceEEEE---CCEEEEEccCCCCCCCCCcceeEe
Q 016201 207 RKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.. +..+......-..+.+ ++.+++.|+.+ ..+..|++
T Consensus 241 ~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~ 280 (435)
T 4e54_B 241 KE---LWNLRMHKKKVTHVALNPCCDWFLATASVD-----QTVKIWDL 280 (435)
T ss_dssp CB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT-----SBCCEEET
T ss_pred ce---eEEEecccceEEeeeecCCCceEEEEecCc-----ceeeEEec
Confidence 42 2222211111122222 23466666653 35566664
No 155
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=86.72 E-value=11 Score=34.70 Aligned_cols=100 Identities=8% Similarity=0.066 Sum_probs=50.6
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++.+++.|+.++ .+.+||..+.+-... +... ...-.+++. .++++++.|+.++ .+..||..+
T Consensus 119 ~~~~l~s~s~Dg------~i~vwd~~~~~~~~~--l~~h-~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~ 181 (410)
T 1vyh_C 119 VFSVMVSASEDA------TIKVWDYETGDFERT--LKGH-TDSVQDISFDHSGKLLASCSADM--------TIKLWDFQG 181 (410)
T ss_dssp SSSEEEEEESSS------CEEEEETTTCCCCEE--ECCC-SSCEEEEEECTTSSEEEEEETTS--------CCCEEETTS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEE--Eecc-CCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCC
Confidence 456778887653 488899887654322 1110 011222332 3567777776543 355678766
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..-. ..+......-..+.+ ++..++.|+.+ ..+..|++
T Consensus 182 ~~~~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~ 221 (410)
T 1vyh_C 182 FECI--RTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEV 221 (410)
T ss_dssp SCEE--ECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEET
T ss_pred Ccee--EEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEEC
Confidence 4432 222211111122222 45566677653 45666664
No 156
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.69 E-value=15 Score=31.71 Aligned_cols=15 Identities=7% Similarity=0.341 Sum_probs=11.2
Q ss_pred eeeeeecCCCceEEe
Q 016201 52 VASNWALEKSGVVVI 66 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~ 66 (393)
++..||.++.+-..+
T Consensus 46 tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 46 SVYLWSASSGDILQL 60 (318)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 788899888776544
No 157
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=86.68 E-value=9 Score=33.43 Aligned_cols=101 Identities=14% Similarity=0.222 Sum_probs=50.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
++.+++.|+.+ ..+..+|..+.+-...-.... ..........++++++.|+. -..+..||..+.
T Consensus 24 ~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~--------d~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYS------GRVELWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSD--------DFRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEET--------TSEEEEEETTTC
T ss_pred CCCEEEEEcCC------CcEEEEECCCCceeEEeeccC--CcEEEEEEeCCCCEEEEECC--------CCEEEEEECCCC
Confidence 55677777765 357888988765332111111 11122222335566666653 245778888776
Q ss_pred CeEe-CCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 208 KWDS-IPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 208 ~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
+-.. +.. ....-.+++.. ++.+++.|+.+ ..+..|++
T Consensus 88 ~~~~~~~~--h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~ 126 (304)
T 2ynn_A 88 EKVVDFEA--HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNW 126 (304)
T ss_dssp CEEEEEEC--CSSCEEEEEECSSSSEEEEEETT-----SCEEEEEG
T ss_pred cEEEEEeC--CCCcEEEEEEcCCCCEEEEECCC-----CeEEEEEC
Confidence 5321 111 11111122222 45566676653 46777774
No 158
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=86.49 E-value=7.1 Score=34.55 Aligned_cols=24 Identities=25% Similarity=0.066 Sum_probs=15.7
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCce
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGV 63 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W 63 (393)
++.+++.|+. ++ .+..||..+..-
T Consensus 43 ~~~~l~~~~~-dg-------~i~vwd~~~~~~ 66 (369)
T 3zwl_B 43 EGDLLFSCSK-DS-------SASVWYSLNGER 66 (369)
T ss_dssp TSCEEEEEES-SS-------CEEEEETTTCCE
T ss_pred CCCEEEEEeC-CC-------EEEEEeCCCchh
Confidence 4556667766 66 678888766543
No 159
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.78 E-value=3.9 Score=36.32 Aligned_cols=63 Identities=5% Similarity=-0.009 Sum_probs=38.4
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEE---EeCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV---SDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~---~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
+++.++.|+.+ ..+.+||+.+.+-..+.....+ -.+++ ..++.+++.|+.+ ..+..||.
T Consensus 97 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~ 158 (368)
T 3mmy_A 97 DGSKVFTASCD------KTAKMWDLSSNQAIQIAQHDAP----VKTIHWIKAPNYSCVMTGSWD--------KTLKFWDT 158 (368)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECSSC----EEEEEEEECSSCEEEEEEETT--------SEEEEECS
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCCceeeccccCc----eEEEEEEeCCCCCEEEEccCC--------CcEEEEEC
Confidence 56666777654 3588899988876654332221 22233 3466777777643 34788888
Q ss_pred CCCC
Q 016201 205 ETRK 208 (393)
Q Consensus 205 ~~~~ 208 (393)
.+.+
T Consensus 159 ~~~~ 162 (368)
T 3mmy_A 159 RSSN 162 (368)
T ss_dssp SCSS
T ss_pred CCCc
Confidence 7654
No 160
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=85.64 E-value=5.2 Score=35.22 Aligned_cols=102 Identities=7% Similarity=0.008 Sum_probs=51.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCc----eEeCCCCCCCCCcceeEEEEeCCE-EEEEeceeCCCCCCCCCeeEEE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK----WVDRFDMPKDMAHSHLGVVSDGRY-IYIVSGQYGPQCRGPTSRTFVL 202 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~y 202 (393)
++.+++.|+.+ ..+.+||..+.+ -..+..... ........-+++ .++.|+.+ ..+..|
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~~d--------g~i~~w 84 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRYKH---PLLCCNFIDNTDLQIYVGTVQ--------GEILKV 84 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEECSS---CEEEEEEEESSSEEEEEEETT--------SCEEEE
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeeeecCC---ceEEEEECCCCCcEEEEEcCC--------CeEEEE
Confidence 45566666654 347777776655 333222211 112222223566 66666532 358889
Q ss_pred eC-CCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEe
Q 016201 203 DS-ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 203 d~-~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
|. .+..-..+...+....-.++....+.+++.|+.+ ..+..|++
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~ 129 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDP 129 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECH
T ss_pred EeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcc
Confidence 98 8877655544112222223333335555666553 35556654
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=85.50 E-value=7.4 Score=34.33 Aligned_cols=62 Identities=8% Similarity=0.156 Sum_probs=32.6
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCc--eEeCCCCCCCCCcceeEEE-------EeCCEEEEEeceeCCCCCCCCCee
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVV-------SDGRYIYIVSGQYGPQCRGPTSRT 199 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~~~~v 199 (393)
+.+++.|+.+ ..+..||..+.+ -..+..... .-.++. ..++..++.|+.+ ..+
T Consensus 80 ~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~s~~~~~l~~~~~d--------~~i 141 (357)
T 3i2n_A 80 QRYLATGDFG------GNLHIWNLEAPEMPVYSVKGHKE----IINAIDGIGGLGIGEGAPEIVTGSRD--------GTV 141 (357)
T ss_dssp TCCEEEEETT------SCEEEECTTSCSSCSEEECCCSS----CEEEEEEESGGGCC-CCCEEEEEETT--------SCE
T ss_pred CceEEEecCC------CeEEEEeCCCCCccEEEEEeccc----ceEEEeeccccccCCCccEEEEEeCC--------CeE
Confidence 4677777755 347888887664 222221111 111221 1245566666532 347
Q ss_pred EEEeCCCCC
Q 016201 200 FVLDSETRK 208 (393)
Q Consensus 200 ~~yd~~~~~ 208 (393)
..||..+..
T Consensus 142 ~vwd~~~~~ 150 (357)
T 3i2n_A 142 KVWDPRQKD 150 (357)
T ss_dssp EEECTTSCS
T ss_pred EEEeCCCCC
Confidence 788887754
No 162
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=85.41 E-value=17 Score=31.30 Aligned_cols=149 Identities=7% Similarity=-0.043 Sum_probs=70.9
Q ss_pred EEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeEEcC
Q 016201 34 FMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMP 113 (393)
Q Consensus 34 ~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 113 (393)
.||+++.. .+ .+.+||+.+. ...+...... ..++++-.+...-........+..+|+.+.+.+.+.
T Consensus 41 ~l~~~~~~-~~-------~i~~~~~~~~-~~~~~~~~~~-----~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 41 AVIFSDVR-QN-------RTWAWSDDGQ-LSPEMHPSHH-----QNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEEGG-GT-------EEEEEETTSC-EEEEESSCSS-----EEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred EEEEEeCC-CC-------EEEEEECCCC-eEEEECCCCC-----cceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 47777654 33 6888998877 5444331111 122222211111111111236889998777776653
Q ss_pred CCC-ccc-cC-ccEEE-ECCEEEEE----ecCCC-------CCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-e
Q 016201 114 SAP-VPR-LD-GAAIQ-IKNLFYVF----AGYGS-------LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-D 177 (393)
Q Consensus 114 ~~~-~~r-~~-~~~~~-~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~ 177 (393)
... ..+ .. ..++. -+++||+. |.... .......++++|+. .+...+..... . ..+++. -
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---~-~~gi~~s~ 181 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV---K-PNGLAFLP 181 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS---S-EEEEEECT
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC---C-CccEEECC
Confidence 321 111 11 12222 26788886 43210 11112479999987 55544422111 1 123333 3
Q ss_pred CCEEEEEeceeCCCCCCCCCeeEEEeCC-CCCe
Q 016201 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSE-TRKW 209 (393)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~-~~~W 209 (393)
++++++... ....+++||+. +.+.
T Consensus 182 dg~~lv~~~--------~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 182 SGNLLVSDT--------GDNATHRYCLNARGET 206 (296)
T ss_dssp TSCEEEEET--------TTTEEEEEEECSSSCE
T ss_pred CCCEEEEeC--------CCCeEEEEEECCCCcC
Confidence 565554432 13568888876 4444
No 163
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=85.27 E-value=14 Score=32.40 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=46.9
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-------CCEEEEEeceeCCCCCCCCCeeE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-------GRYIYIVSGQYGPQCRGPTSRTF 200 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~v~ 200 (393)
++.+++.|+.++ .+.++|+....-..+..... .-..+... ++..++.|+.+ ..+.
T Consensus 118 ~~~~l~s~s~D~------~i~vwd~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~ 179 (319)
T 3frx_A 118 KASMIISGSRDK------TIKVWTIKGQCLATLLGHND----WVSQVRVVPNEKADDDSVTIISAGND--------KMVK 179 (319)
T ss_dssp TSCEEEEEETTS------CEEEEETTSCEEEEECCCSS----CEEEEEECCC------CCEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCeEEEEeccCC----cEEEEEEccCCCCCCCccEEEEEeCC--------CEEE
Confidence 456777777653 47778876654333322111 11122221 23355555532 3477
Q ss_pred EEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 201 VLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 201 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.||..+.+-.. .+......-..+.+ ++++++.|+.+ ..+..|++
T Consensus 180 ~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~~~d-----g~i~iwd~ 225 (319)
T 3frx_A 180 AWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASAGKD-----GEIMLWNL 225 (319)
T ss_dssp EEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEEETT-----CEEEEEET
T ss_pred EEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEC
Confidence 78887654221 11111111111222 56677777764 45666764
No 164
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=84.90 E-value=5.8 Score=35.82 Aligned_cols=133 Identities=8% Similarity=-0.068 Sum_probs=64.1
Q ss_pred ceeeccCCCCCeEEcCCCCccccC-ccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLD-GAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 174 (393)
.+..+|..+.+............. .+++.. ++.+++.|+.+ ..+..+|+.++....+..............
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 170 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSWDYWYCCVD 170 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEEEEECCCCSSCCEEEEE
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceEEEeccCCCCCCeEEEE
Confidence 567777766655443322111112 222222 34677777754 358889998877665543322101112222
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCE-EEEEccCCCCCCCCCcceeEe
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGR-LHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..-++.+++.|+. ...+..||.....-..+.... ..-.+++.. ++. +++.|+.+ ..+..|++
T Consensus 171 ~~~~~~~l~~~~~--------d~~i~i~d~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~ 234 (383)
T 3ei3_B 171 VSVSRQMLATGDS--------TGRLLLLGLDGHEIFKEKLHK--AKVTHAEFNPRCDWLMATSSVD-----ATVKLWDL 234 (383)
T ss_dssp EETTTTEEEEEET--------TSEEEEEETTSCEEEEEECSS--SCEEEEEECSSCTTEEEEEETT-----SEEEEEEG
T ss_pred ECCCCCEEEEECC--------CCCEEEEECCCCEEEEeccCC--CcEEEEEECCCCCCEEEEEeCC-----CEEEEEeC
Confidence 2235566666653 245888888543322222111 111122222 333 67776653 35666664
No 165
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=84.89 E-value=16 Score=30.41 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=49.6
Q ss_pred cEEEECCEEEEEecCCCCCCccceEEEEECCCCceEe--C----CCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCC
Q 016201 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--R----FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGP 195 (393)
Q Consensus 123 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~----~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 195 (393)
+++.+.+++|++=| ..+|+++.....+.. + +.||. .-.++... .++++|+|-|
T Consensus 28 Ai~~~~g~~y~Fkg--------~~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG--------- 87 (207)
T 1pex_A 28 AITSLRGETMIFKD--------RFFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG--------- 87 (207)
T ss_dssp EEEEETTEEEEEET--------TEEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET---------
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc---------
Confidence 45567999999966 347777765433321 1 23443 22333333 2689999975
Q ss_pred CCeeEEEeCCCCCe---EeCCCCCCCC--CCceEEEE---CCEEEEEccC
Q 016201 196 TSRTFVLDSETRKW---DSIPPLPSPR--YSPATQLW---RGRLHVMGGS 237 (393)
Q Consensus 196 ~~~v~~yd~~~~~W---~~~~~~p~~r--~~~~~~~~---~~~iyv~GG~ 237 (393)
+.+|+|+..+..- ..+..+-.|. ..--+++. ++++|+|-|.
T Consensus 88 -~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~ 136 (207)
T 1pex_A 88 -RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN 136 (207)
T ss_dssp -TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT
T ss_pred -CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC
Confidence 3477776432211 2233221221 12233332 4799999763
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=84.73 E-value=9.4 Score=33.61 Aligned_cols=151 Identities=6% Similarity=-0.093 Sum_probs=71.8
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHh----hcceeeccCCCC
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFL----SATFADLPAPDL 107 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 107 (393)
++.||+.+.. ++ .+.+||+++.....+..... ....+++.-.+...-..... ...++.+|+.+.
T Consensus 55 ~g~l~~~~~~-~~-------~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 55 QGQLFLLDVF-EG-------NIFKINPETKEIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp TSCEEEEETT-TC-------EEEEECTTTCCEEEEEECSS----SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred CCCEEEEECC-CC-------EEEEEeCCCCcEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 4567776654 33 68889988877765432111 11122222111100000000 126888888776
Q ss_pred CeEE-cCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCC-EEEE
Q 016201 108 EWEQ-MPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR-YIYI 183 (393)
Q Consensus 108 ~W~~-~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~-~iyv 183 (393)
+-+. +........-..++.. ++++|+.............++++|+.+.+...+..-. ....+++. -++ .+|+
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI----SVANGIALSTDEKVLWV 198 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE----SSEEEEEECTTSSEEEE
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC----CcccceEECCCCCEEEE
Confidence 6542 2211111111112222 5678886543211112357999999887766542211 11223333 233 5887
Q ss_pred EeceeCCCCCCCCCeeEEEeCCC
Q 016201 184 VSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 184 ~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
.... ...+++||+.+
T Consensus 199 ~~~~--------~~~i~~~d~~~ 213 (333)
T 2dg1_A 199 TETT--------ANRLHRIALED 213 (333)
T ss_dssp EEGG--------GTEEEEEEECT
T ss_pred EeCC--------CCeEEEEEecC
Confidence 7521 34688888854
No 167
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.56 E-value=20 Score=31.33 Aligned_cols=95 Identities=5% Similarity=-0.059 Sum_probs=52.3
Q ss_pred hcceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEE
Q 016201 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 174 (393)
+..++++|+... .......+ ..-++++.. +++|||....... ..+.++|+.+.+.+.+..++.. +.....
T Consensus 52 ~~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~vad~~~~~----~~v~~~d~~~g~~~~~~~~~~~--~~~~g~ 122 (306)
T 2p4o_A 52 VGEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLVATGWNADS----IPVVSLVKSDGTVETLLTLPDA--IFLNGI 122 (306)
T ss_dssp TTEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEEEEEECTTS----CEEEEEECTTSCEEEEEECTTC--SCEEEE
T ss_pred CCeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEEEEeccCCc----ceEEEEcCCCCeEEEEEeCCCc--cccCcc
Confidence 346888887653 22222222 112223332 5678887532111 2478899888888776655432 333333
Q ss_pred E-EeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 175 V-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 175 ~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
+ ..++.+|+.-- ....++++|+.+.
T Consensus 123 ~~~~~~~~~v~d~--------~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 123 TPLSDTQYLTADS--------YRGAIWLIDVVQP 148 (306)
T ss_dssp EESSSSEEEEEET--------TTTEEEEEETTTT
T ss_pred cccCCCcEEEEEC--------CCCeEEEEeCCCC
Confidence 3 34567777631 1457999998764
No 168
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=84.31 E-value=2.7 Score=38.16 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=36.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCC----------CCCCCCcceeEEEEe--CCEEEEEeceeCCCCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD----------MPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGP 195 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~----------~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 195 (393)
++.+++.|+.++ .+.+||+.+.+...... .+......-.+++.. ++.+++.|+.
T Consensus 55 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------- 120 (408)
T 4a11_B 55 EGRYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF-------- 120 (408)
T ss_dssp TCCEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET--------
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC--------
Confidence 567777887653 47888887765322211 000001112223322 4556666653
Q ss_pred CCeeEEEeCCCCCeEe
Q 016201 196 TSRTFVLDSETRKWDS 211 (393)
Q Consensus 196 ~~~v~~yd~~~~~W~~ 211 (393)
...+..||..+.+-..
T Consensus 121 d~~i~iwd~~~~~~~~ 136 (408)
T 4a11_B 121 DKTLKVWDTNTLQTAD 136 (408)
T ss_dssp TSEEEEEETTTTEEEE
T ss_pred CCeEEEeeCCCCccce
Confidence 2458888888765433
No 169
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=84.30 E-value=27 Score=34.64 Aligned_cols=182 Identities=7% Similarity=0.008 Sum_probs=84.8
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCC-------CccceEEEEECCCCceE--eCCCCCCCCC
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLD-------YVHSHVDVYNFTDNKWV--DRFDMPKDMA 168 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~~yd~~~~~W~--~~~~~~~~~~ 168 (393)
.++.+|..+.+......++..+....+..-+++.++++..+... .....++++++.+.+-+ .+...+....
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~ 227 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPT 227 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTT
T ss_pred EEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCE
Confidence 68888888776531111221111112222266666666554321 12356999999877632 2322222111
Q ss_pred cceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcce
Q 016201 169 HSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEH 248 (393)
Q Consensus 169 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 248 (393)
........-+++..++...... ..++++.+|..+..++.+..-.. .....+..++.+|+...... ....+..
T Consensus 228 ~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~g~l~~~s~~~~--~~~~l~~ 299 (695)
T 2bkl_A 228 TFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPGEKDFRLLVKGVG--AKYEVHAWKDRFYVLTDEGA--PRQRVFE 299 (695)
T ss_dssp CEEEEEECTTSCCEEEEEEETT----TEEEEEEECTTCSSCEEEEECSS--CCEEEEEETTEEEEEECTTC--TTCEEEE
T ss_pred EEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCCCCceEEeecCCC--ceEEEEecCCcEEEEECCCC--CCCEEEE
Confidence 1122222335554444443321 24678888877777877653222 11222335667666543211 1122333
Q ss_pred eEeeeecccc-ccCCeEEeccCC-CCCCceeEEEECCEEEEEcCCCC
Q 016201 249 WSIAVKDGKA-LEKAWRTEIPIP-RGGPHRACFVFNDRLFVVGGQEG 293 (393)
Q Consensus 249 ~~~~~~d~~~-~~~~W~~~~~~p-~~~~~~~~~~~~~~iyv~GG~~~ 293 (393)
++ .+. ....|+.+.+.. .... ......++++++....++
T Consensus 300 ~d-----~~~~~~~~~~~l~~~~~~~~l-~~~~~~~~~lv~~~~~dg 340 (695)
T 2bkl_A 300 VD-----PAKPARASWKEIVPEDSSASL-LSVSIVGGHLSLEYLKDA 340 (695)
T ss_dssp EB-----TTBCSGGGCEEEECCCSSCEE-EEEEEETTEEEEEEEETT
T ss_pred Ee-----CCCCCccCCeEEecCCCCCeE-EEEEEECCEEEEEEEECC
Confidence 33 211 112387765432 2111 123344888888876554
No 170
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=84.08 E-value=26 Score=32.36 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=33.0
Q ss_pred CCeeEEEeC--CC-CCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCC--CCCCcceeEeeeeccccccCCeE
Q 016201 196 TSRTFVLDS--ET-RKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENR--HTPGLEHWSIAVKDGKALEKAWR 264 (393)
Q Consensus 196 ~~~v~~yd~--~~-~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~~~~~~~d~~~~~~~W~ 264 (393)
...+..||. .+ .++..+..++....-..++...+.+++..+..... ..+.+..|.+ +..+++|+
T Consensus 329 d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~-----~~~~~~~~ 397 (450)
T 2vdu_B 329 TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY-----NLNENSFV 397 (450)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE-----ETTTTEEE
T ss_pred CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEE-----EcCCCeEE
Confidence 345777877 32 44555544433333334556667788776553222 1333455543 35556664
No 171
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=84.07 E-value=13 Score=37.02 Aligned_cols=102 Identities=14% Similarity=0.040 Sum_probs=47.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcc-eeEEEEe-CC--EEEEEeceeCCCCCCCCCeeEEEe
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHS-HLGVVSD-GR--YIYIVSGQYGPQCRGPTSRTFVLD 203 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~-~~~~~~~-~~--~iyv~GG~~~~~~~~~~~~v~~yd 203 (393)
++..++.|+.++ .+.++|.....=..+...... .+. -.+++.. ++ .+++.|+.+ ..+..||
T Consensus 483 ~~~~l~s~s~D~------~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~d--------~~v~vwd 547 (694)
T 3dm0_A 483 DNRQIVSASRDR------TIKLWNTLGECKYTISEGGEG-HRDWVSCVRFSPNTLQPTIVSASWD--------KTVKVWN 547 (694)
T ss_dssp TSSCEEEEETTS------CEEEECTTSCEEEEECSSTTS-CSSCEEEEEECSCSSSCEEEEEETT--------SCEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEECCCCcceeeccCCCC-CCCcEEEEEEeCCCCcceEEEEeCC--------CeEEEEE
Confidence 456667777653 467777655432222211111 111 1222222 22 355666532 3477888
Q ss_pred CCCCCeEeCCCCCCCCCCc-eEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 204 SETRKWDSIPPLPSPRYSP-ATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 204 ~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..+.+-... +....... +++.. ++++++.|+.+ ..+..|++
T Consensus 548 ~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D-----g~i~iwd~ 590 (694)
T 3dm0_A 548 LSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD-----GVVLLWDL 590 (694)
T ss_dssp TTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SBCEEEET
T ss_pred CCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEEC
Confidence 877653321 11111111 22222 56777777764 45667774
No 172
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=83.97 E-value=21 Score=31.07 Aligned_cols=62 Identities=16% Similarity=0.140 Sum_probs=32.8
Q ss_pred EEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC
Q 016201 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 130 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
.+++.|+.+ ..+..||+.+.+-...-.... ..-.+++. -++++++.|+.+ ..+..||..+.+
T Consensus 186 ~~~~s~~~d------~~i~i~d~~~~~~~~~~~~h~---~~v~~~~~s~~~~~l~s~s~D--------g~i~iwd~~~~~ 248 (340)
T 4aow_A 186 PIIVSCGWD------KLVKVWNLANCKLKTNHIGHT---GYLNTVTVSPDGSLCASGGKD--------GQAMLWDLNEGK 248 (340)
T ss_dssp CEEEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEETT--------CEEEEEETTTTE
T ss_pred cEEEEEcCC------CEEEEEECCCCceeeEecCCC---CcEEEEEECCCCCEEEEEeCC--------CeEEEEEeccCc
Confidence 456666654 247788988766433211111 11122332 356677777643 347778877643
No 173
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=83.21 E-value=39 Score=33.63 Aligned_cols=99 Identities=18% Similarity=0.302 Sum_probs=58.8
Q ss_pred ccEEEECCEEEEEecCCCCCCccceEEEEECCCCc--eEeCCCCCCCCC------cceeEEEEeCCEEEEEeceeCCCCC
Q 016201 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMA------HSHLGVVSDGRYIYIVSGQYGPQCR 193 (393)
Q Consensus 122 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~~ 193 (393)
.+.++.++.||+... ...+..+|..+.+ |+.-...+.... ....+.++.+++||+...
T Consensus 71 ~~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------- 136 (677)
T ss_dssp CCCEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------
T ss_pred eCCEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------
Confidence 444667999999765 1458889987754 876443321000 112245667899998742
Q ss_pred CCCCeeEEEeCCCCC--eEeCCC-C-CC-CCCCceEEEECCEEEEEcc
Q 016201 194 GPTSRTFVLDSETRK--WDSIPP-L-PS-PRYSPATQLWRGRLHVMGG 236 (393)
Q Consensus 194 ~~~~~v~~yd~~~~~--W~~~~~-~-p~-~r~~~~~~~~~~~iyv~GG 236 (393)
...++++|..+.+ |+.-.. - +. .....+-++.++++|+..+
T Consensus 137 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 137 --DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp --TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCB
T ss_pred --CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEec
Confidence 3569999988765 875432 1 11 1122234567888887643
No 174
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=82.73 E-value=40 Score=33.47 Aligned_cols=177 Identities=11% Similarity=0.046 Sum_probs=83.6
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCC-------CCccceEEEEECCCCce--EeCCCCCC--C
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSL-------DYVHSHVDVYNFTDNKW--VDRFDMPK--D 166 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~-------~~~~~~~~~yd~~~~~W--~~~~~~~~--~ 166 (393)
.++.+|..+.+.... ..+..+....+.. +++-+++...+.. ......++++++.+..= ..+...+. +
T Consensus 156 ~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~ 233 (693)
T 3iuj_A 156 EIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQH 233 (693)
T ss_dssp EEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGC
T ss_pred EEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCC
Confidence 688888888876543 1222222333344 6654444443321 01235688888877642 11222221 1
Q ss_pred CCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC--CeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCC
Q 016201 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTP 244 (393)
Q Consensus 167 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 244 (393)
. +.......-+++..++...... ..++++.+|..+. .|..+.+-.... .......+++||+....+. +
T Consensus 234 ~-~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~~----~ 303 (693)
T 3iuj_A 234 H-RYVGATVTEDDRFLLISAANST----SGNRLYVKDLSQENAPLLTVQGDLDAD-VSLVDNKGSTLYLLTNRDA----P 303 (693)
T ss_dssp C-SEEEEEECTTSCEEEEEEESSS----SCCEEEEEETTSTTCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC----T
T ss_pred e-EEEEEEEcCCCCEEEEEEccCC----CCcEEEEEECCCCCCceEEEeCCCCce-EEEEeccCCEEEEEECCCC----C
Confidence 1 1122222345544333322211 1468999998765 677765422111 1123455788998865431 1
Q ss_pred CcceeEeeeeccc-cccCCeEEeccCCCCCCceeEEEECCEEEEEcCC
Q 016201 245 GLEHWSIAVKDGK-ALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQ 291 (393)
Q Consensus 245 ~~~~~~~~~~d~~-~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 291 (393)
.+.+...+.+ +....|+.+.+-..... +....++.|++..-.
T Consensus 304 ---~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 304 ---NRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp ---TCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred ---CCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEE
Confidence 1222222221 12345887655433222 444456676665433
No 175
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=82.45 E-value=28 Score=31.40 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=26.5
Q ss_pred CeeEEEeCCCCCeEeCC--CCCCCCCCce-EEEE---CCEEEEEccCCCCCCCCCcceeEe
Q 016201 197 SRTFVLDSETRKWDSIP--PLPSPRYSPA-TQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 197 ~~v~~yd~~~~~W~~~~--~~p~~r~~~~-~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
..+..||..+.+-...- ..+....... .+.+ ++.+++.|+.+ ..+..|++
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~ 235 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDL 235 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEET
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEEC
Confidence 34778888877643322 2222221111 1222 56788888764 46677774
No 176
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=82.13 E-value=39 Score=33.62 Aligned_cols=96 Identities=18% Similarity=0.272 Sum_probs=53.7
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCC--------CCCceEEEECCEEEEEccCCCCCCCC
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRHTP 244 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~ 244 (393)
++.++.||+... ...++++|..+.+ |+.-...+.. ....+.++.+++||+... ..
T Consensus 74 ~v~~g~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg 138 (677)
T 1kb0_A 74 VVVDGIMYVSAS---------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DG 138 (677)
T ss_dssp EEETTEEEEECG---------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TS
T ss_pred EEECCEEEEECC---------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CC
Confidence 457999999864 3458899987765 8765543211 122345667888888632 12
Q ss_pred CcceeEeeeeccccccCCeEEecc-CCC--CCCceeEEEECCEEEEEcC
Q 016201 245 GLEHWSIAVKDGKALEKAWRTEIP-IPR--GGPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 245 ~~~~~~~~~~d~~~~~~~W~~~~~-~p~--~~~~~~~~~~~~~iyv~GG 290 (393)
.+.++| .......|+.... -+. .....+.++.++++|+..+
T Consensus 139 ~l~alD-----~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 139 RLIALD-----AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp EEEEEE-----TTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCB
T ss_pred EEEEEE-----CCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEec
Confidence 233333 2233445876533 111 1122244567888887654
No 177
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.88 E-value=45 Score=33.45 Aligned_cols=163 Identities=9% Similarity=-0.007 Sum_probs=78.1
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecC-CcchhhHHhhcceeeccCCCCCeE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDK-KGQDAERFLSATFADLPAPDLEWE 110 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~W~ 110 (393)
++.||+.||... -+.+||+++.++..+...... ......+++.+ .|..--. ...-+.+|++.+.+++
T Consensus 482 ~g~lWi~~~t~~--------Gl~~~d~~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~lWig-t~~Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 482 EGNVWVLLYNNK--------GIDKINPRTREVTKLFADELT---GEKSPNYLLCDEDGLLWVG-FHGGVMRINPKDESQQ 549 (758)
T ss_dssp TSCEEEEETTCS--------SEEEEETTTTEEEEECTTTSC---GGGCEEEEEECTTSCEEEE-ETTEEEEECC--CCCC
T ss_pred CCCEEEEccCCC--------CcEEEeCCCCceEEecCCCcC---CCcccceEEECCCCCEEEE-ecCceEEEecCCCceE
Confidence 356787665523 377899998888776431111 01111122222 2211111 1225788998887766
Q ss_pred EcC--CCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEece
Q 016201 111 QMP--SAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQ 187 (393)
Q Consensus 111 ~~~--~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~ 187 (393)
... .+|. ..-.+++.-++.|++... +-+.+|||.+.+..... ++.. ....++.. .++.||+- |.
T Consensus 550 ~~~~~gl~~-~~i~~i~~~~g~lWi~t~--------~Gl~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~G~l~fG-~~ 616 (758)
T 3ott_A 550 SISFGSFSN-NEILSMTCVKNSIWVSTT--------NGLWIIDRKTMDARQQN-MTNK--RFTSLLFDPKEDCVYLG-GA 616 (758)
T ss_dssp BCCCCC----CCEEEEEEETTEEEEEES--------SCEEEEETTTCCEEEC---CCC--CCSEEEEETTTTEEEEE-CB
T ss_pred EecccCCCc-cceEEEEECCCCEEEECC--------CCeEEEcCCCceeEEec-CCCC--ceeeeEEECCCCcEEEe-cC
Confidence 553 2332 112233344788888543 23788999998877542 3321 11222222 36666654 42
Q ss_pred eCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEE
Q 016201 188 YGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLH 232 (393)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 232 (393)
+-+-+|+|+.-. .....|....+-+.++++-+
T Consensus 617 ---------~Gl~~f~p~~~~----~~~~~~~v~it~~~v~~~~~ 648 (758)
T 3ott_A 617 ---------DGFGISHSNLEA----TYQPERPILLTALYINNQLV 648 (758)
T ss_dssp ---------SEEEEEEC---C----CCCCCCCCEEEEEEETTEEC
T ss_pred ---------CceEEEChhhcc----cccCCCCEEEEEEEECCeEc
Confidence 347778997421 11222334444455566544
No 178
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=81.67 E-value=22 Score=31.43 Aligned_cols=21 Identities=19% Similarity=0.143 Sum_probs=14.5
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCC
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEK 60 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~ 60 (393)
++.+++.|+. ++ .+..||..+
T Consensus 38 d~~~l~sgs~-D~-------~v~iWd~~~ 58 (343)
T 2xzm_R 38 DSPVLISGSR-DK-------TVMIWKLYE 58 (343)
T ss_dssp CCCEEEEEET-TS-------CEEEEEECS
T ss_pred CCCEEEEEcC-CC-------EEEEEECCc
Confidence 5667778877 66 677777654
No 179
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=80.98 E-value=33 Score=31.24 Aligned_cols=101 Identities=10% Similarity=0.098 Sum_probs=57.1
Q ss_pred ceeeccCCCCCeEEcCCC---Ccc--c----cCc---cEEEE----CCEEEEEecCCCCCCccceEEEEECCCCceEeCC
Q 016201 98 TFADLPAPDLEWEQMPSA---PVP--R----LDG---AAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF 161 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~---~~~--r----~~~---~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~ 161 (393)
.+++.+....+|+.+... +.. + ... +++.. .+.||+.+.. .-+++.+-...+|+.+.
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~-------ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP-------QGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET-------TEEEEESSTTSBCEECH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC-------CcEEEEcCCCCCeEECc
Confidence 477777777899988642 211 1 111 22222 4667775421 34788887888999875
Q ss_pred CC---CC------------CCCcceeEEEEe---CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC
Q 016201 162 DM---PK------------DMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (393)
Q Consensus 162 ~~---~~------------~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (393)
.+ |. +.....+++++. .+.||+... ...+++.+-...+|+.+..
T Consensus 155 ~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~---------~ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 155 GFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS---------SGGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp HHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE---------TBEEEEESSTTSSCEECCT
T ss_pred CccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC---------CCCEEEECCCCCCceECCC
Confidence 32 21 001122344443 356887643 1237777777889998753
No 180
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=80.92 E-value=22 Score=33.88 Aligned_cols=62 Identities=8% Similarity=-0.012 Sum_probs=32.2
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++.++.|+.++ .+..+|..+..-..+..... . -.+++. -+++.++.|+.+ ..+..||...
T Consensus 314 ~~~~l~t~~~d~------~i~~w~~~~~~~~~~~~~~~---~-v~~~~~s~~g~~l~~~~~d--------g~v~~~~~~~ 375 (577)
T 2ymu_A 314 DGQTIASASDDK------TVKLWNRNGQHLQTLTGHSS---S-VWGVAFSPDGQTIASASDD--------KTVKLWNRNG 375 (577)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEECCCSS---C-EEEEEECTTSSEEEEEETT--------SEEEEEETTC
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeEEEeCCCC---C-EEEEEECCCCCEEEEEeCC--------CEEEEEcCCC
Confidence 456666666543 36677877665444332221 1 222333 356666666532 3466777654
Q ss_pred C
Q 016201 207 R 207 (393)
Q Consensus 207 ~ 207 (393)
.
T Consensus 376 ~ 376 (577)
T 2ymu_A 376 Q 376 (577)
T ss_dssp C
T ss_pred C
Confidence 3
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=80.80 E-value=47 Score=32.97 Aligned_cols=182 Identities=11% Similarity=0.024 Sum_probs=83.2
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCC----------CccceEEEEECCCCceE--eCCCCC
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLD----------YVHSHVDVYNFTDNKWV--DRFDMP 164 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~----------~~~~~~~~yd~~~~~W~--~~~~~~ 164 (393)
.++.+|..+.+..... .+..+ ...++-. +++.++++..+... .....++++++.+.+-+ .+...+
T Consensus 152 ~i~v~d~~tg~~~~~~-~~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDV-LERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp EEEEEETTTTEEEEEE-EEEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEECCCCCCCccc-ccCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC
Confidence 6788888887765431 11111 1222222 55544444433220 12356899999887632 221222
Q ss_pred CCCCcceeE-EEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC------C--CeEeCCCCCCCCCCceEEEECCEEEEEc
Q 016201 165 KDMAHSHLG-VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET------R--KWDSIPPLPSPRYSPATQLWRGRLHVMG 235 (393)
Q Consensus 165 ~~~~r~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~iyv~G 235 (393)
.. ...... ...-+++..++...... ...++++.+|..+ . .++.+..-.... ......-++.||+.+
T Consensus 230 ~~-~~~~~~~~~SpDg~~l~~~~~~~~---~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s 304 (710)
T 2xdw_A 230 DE-PKWMGGAELSDDGRYVLLSIREGC---DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKT 304 (710)
T ss_dssp TC-TTCEEEEEECTTSCEEEEEEECSS---SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEE
T ss_pred CC-CeEEEEEEEcCCCCEEEEEEEccC---CCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEE
Confidence 10 111222 22335544444332221 1257899999876 3 576665422221 112234467888886
Q ss_pred cCCCCCCCCCcceeEeeeeccccc-cCCeEEeccCCCCCCceeEEEE-CCEEEEEcCCCC
Q 016201 236 GSKENRHTPGLEHWSIAVKDGKAL-EKAWRTEIPIPRGGPHRACFVF-NDRLFVVGGQEG 293 (393)
Q Consensus 236 G~~~~~~~~~~~~~~~~~~d~~~~-~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~ 293 (393)
..... ...+..+++ +.. ...|+.+.+......-..+... ++.+++....++
T Consensus 305 ~~~~~--~~~l~~~d~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 305 NRHSP--NYRLINIDF-----TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CTTCT--TCEEEEEET-----TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred CCCCC--CCEEEEEeC-----CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 54211 122333332 111 1258776543221111133444 778887765544
No 182
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=80.58 E-value=18 Score=31.73 Aligned_cols=82 Identities=13% Similarity=0.090 Sum_probs=43.9
Q ss_pred cEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCC--CCCcceeEEEE-e-CCEEEEEeceeCCCC----
Q 016201 123 AAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK--DMAHSHLGVVS-D-GRYIYIVSGQYGPQC---- 192 (393)
Q Consensus 123 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~-~-~~~iyv~GG~~~~~~---- 192 (393)
+++.. ++.|||.-.. ..+.++|+.+.+.+.+..... +..+ ...+++ - ++.||+.-.......
T Consensus 84 gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~~~~~~~~~~~~~~~~-p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCY-------YHLSVVGSEGGHATQLATSVDGVPFKW-LYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp EEEEETTTTEEEEEETT-------TEEEEECTTCEECEEEESEETTEECSC-EEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred eEEEcCCCCcEEEEECC-------CCEEEEeCCCCEEEEecccCCCCcccc-cceEEEecCCCEEEEECCcccccccccc
Confidence 44444 5789997432 237889988776555432211 1112 223444 3 578998742210000
Q ss_pred -----CCCCCeeEEEeCCCCCeEeC
Q 016201 193 -----RGPTSRTFVLDSETRKWDSI 212 (393)
Q Consensus 193 -----~~~~~~v~~yd~~~~~W~~~ 212 (393)
......+++||+.+.+.+.+
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred eehcccCCCceEEEEeCCCCEEEEe
Confidence 01235699999987765543
No 183
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=80.34 E-value=27 Score=29.92 Aligned_cols=85 Identities=8% Similarity=-0.059 Sum_probs=39.2
Q ss_pred CCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCc
Q 016201 196 TSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPH 275 (393)
Q Consensus 196 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~ 275 (393)
...+..+|..+..-........+.........++.+++.+|.. ...+..|++ .+ .+.+..+......
T Consensus 220 ~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~----d~~i~iwd~-------~~--~~~~~~l~gH~~~ 286 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA----QNQLVIWKY-------PT--MAKVAELKGHTSR 286 (318)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT----TCCEEEEET-------TT--CCEEEEECCCSSC
T ss_pred CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcC----CCEEEEEEC-------CC--CcEEEEEcCCCCC
Confidence 3457778887766443322222111111122245566655543 345667764 22 2233333221111
Q ss_pred eeEEEE--CCEEEEEcCCCC
Q 016201 276 RACFVF--NDRLFVVGGQEG 293 (393)
Q Consensus 276 ~~~~~~--~~~iyv~GG~~~ 293 (393)
..++.+ ++++++.||.++
T Consensus 287 V~~l~~spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 287 VLSLTMSPDGATVASAAADE 306 (318)
T ss_dssp EEEEEECTTSSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEecCC
Confidence 122233 677788887765
No 184
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=79.70 E-value=39 Score=33.14 Aligned_cols=99 Identities=13% Similarity=0.199 Sum_probs=55.8
Q ss_pred ccEEEECCEEEEEecCCCCCCccceEEEEEC-CCC--ceEeCCCCCCCC---C---cceeEEEE--eCCE----EEEEec
Q 016201 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDN--KWVDRFDMPKDM---A---HSHLGVVS--DGRY----IYIVSG 186 (393)
Q Consensus 122 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~~~---~---r~~~~~~~--~~~~----iyv~GG 186 (393)
.+.++.++.||+....+ ..+.++|. .+. .|+.-...+... . ....+.++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~~------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred eccEEECCEEEEEeCCC------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 44566799999986521 35888998 665 487744332110 0 00123444 5777 887632
Q ss_pred eeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCC--CCCceEEEECCEEEEEc
Q 016201 187 QYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP--RYSPATQLWRGRLHVMG 235 (393)
Q Consensus 187 ~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~iyv~G 235 (393)
...++++|..+.+ |+.-..-+.. ....+-++.+++||+-.
T Consensus 130 ---------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 130 ---------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp ---------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECC
T ss_pred ---------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEe
Confidence 3468999988766 8753221111 11223356788887643
No 185
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=79.69 E-value=32 Score=32.95 Aligned_cols=134 Identities=10% Similarity=0.070 Sum_probs=67.5
Q ss_pred CEEEEEecC-CCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEE-EeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 129 NLFYVFAGY-GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 129 ~~iyv~GG~-~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
++.++.|+. + ..+..||..+.+... ..+.... ..-.+++ .-++++++.|+.+ ..+..||..+
T Consensus 456 ~~~l~~~~~~d------~~i~~~~~~~~~~~~-~~~~~~~-~~v~~~~~s~~g~~l~~~~~d--------g~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEG------NTIQVFKLSDLEVSF-DLKTPLR-AKPSYISISPSETYIAAGDVM--------GKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTT------SCEEEEETTEEEEEE-ECSSCCS-SCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCEEEEeecCC------CeEEEEECCCccccc-cccCCcc-CceEEEEECCCCCEEEEcCCC--------CeEEEeeCCC
Confidence 555566664 3 358889988876642 2222211 1122222 2367777777642 3488899877
Q ss_pred CCeEeCCCCCC-CCCCceEEEE------------CCEEEEEccCCCCCCCCCcceeEeeeeccccccC--CeEEeccCCC
Q 016201 207 RKWDSIPPLPS-PRYSPATQLW------------RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEK--AWRTEIPIPR 271 (393)
Q Consensus 207 ~~W~~~~~~p~-~r~~~~~~~~------------~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~--~W~~~~~~p~ 271 (393)
.+-.. .+.. ....-..+.+ ++++++.|+.+ ..+..|++ .+. ....+.. ..
T Consensus 520 ~~~~~--~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-----g~i~iw~~-------~~~~~~~~~~~~-h~ 584 (615)
T 1pgu_A 520 REVKT--SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-----TNIFIYSV-------KRPMKIIKALNA-HK 584 (615)
T ss_dssp TEEEE--CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-----SCEEEEES-------SCTTCCEEETTS-ST
T ss_pred Cccee--EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-----CcEEEEEC-------CCCceechhhhc-Cc
Confidence 64332 2221 1122222233 57777777764 46777775 222 2222111 11
Q ss_pred CCCceeEEEECCEEEEEcCCCCC
Q 016201 272 GGPHRACFVFNDRLFVVGGQEGD 294 (393)
Q Consensus 272 ~~~~~~~~~~~~~iyv~GG~~~~ 294 (393)
......+..-+++ ++.+|.++.
T Consensus 585 ~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 585 DGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp TCEEEEEEEETTE-EEEEETTSC
T ss_pred cceEEEEEcCCCC-eEEecCCce
Confidence 1121233445888 777877653
No 186
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=79.39 E-value=18 Score=35.21 Aligned_cols=100 Identities=15% Similarity=0.236 Sum_probs=58.2
Q ss_pred ccEEEECCEEEEEecCCCCCCccceEEEEEC-CCC--ceEeCCCCCCCCC------cceeEEEEeCCEEEEEeceeCCCC
Q 016201 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDN--KWVDRFDMPKDMA------HSHLGVVSDGRYIYIVSGQYGPQC 192 (393)
Q Consensus 122 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~ 192 (393)
.+.++.++.||+....+ ..+.++|. .+. .|+.-...+.... ....+.++.+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~~------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred cccEEECCEEEEEeCCC------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------
Confidence 44566799999976521 35888998 664 4876433221000 011234567999998742
Q ss_pred CCCCCeeEEEeCCCCC--eEeCC-CCCCC-CCCceEEEECCEEEEEcc
Q 016201 193 RGPTSRTFVLDSETRK--WDSIP-PLPSP-RYSPATQLWRGRLHVMGG 236 (393)
Q Consensus 193 ~~~~~~v~~yd~~~~~--W~~~~-~~p~~-r~~~~~~~~~~~iyv~GG 236 (393)
...++++|..+.+ |+.-. ..+.. ....+-++.++++|+..+
T Consensus 124 ---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred ---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 3569999988765 87532 21111 122233467898887643
No 187
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=79.25 E-value=51 Score=32.45 Aligned_cols=58 Identities=0% Similarity=-0.157 Sum_probs=30.1
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCC-----CceEeCCC
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTD-----NKWVDRFD 162 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-----~~W~~~~~ 162 (393)
..++.+|..+.+-..+...... .......-+++.+++.. + ..++++|+.+ .+-..+..
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~-~~~~~~SpdG~~la~~~-~------~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEE-TASLDFSPVGDRVAYVR-N------HNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTC-CTTCEECTTSSEEEEEE-T------TEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECCCCceEEccCCccc-ccCCcCCCCCCEEEEEE-C------CeEEEEecCcccccCCCcEEecc
Confidence 4788888877655444332211 11112222444333331 1 4688889887 66665543
No 188
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=79.22 E-value=36 Score=30.70 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=51.6
Q ss_pred EEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCC
Q 016201 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 130 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
.+++.|+.++ .+.+||+.+.+....-..... ...-.+++.. ++.+++.|+. -..+..||+.+.+
T Consensus 145 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 145 NVLLSAGCDN------VILVWDVGTGAAVLTLGPDVH-PDTIYSVDWSRDGALICTSCR--------DKRVRVIEPRKGT 209 (402)
T ss_dssp TEEEEEETTS------CEEEEETTTTEEEEEECTTTC-CSCEEEEEECTTSSCEEEEET--------TSEEEEEETTTTE
T ss_pred CEEEEEcCCC------EEEEEECCCCCccEEEecCCC-CCceEEEEECCCCCEEEEEec--------CCcEEEEeCCCCc
Confidence 4777777653 488899988765432110110 1112233332 5666677653 3458889988765
Q ss_pred eEeC--CCCCCCCCCceEEEECCEEEEEccCCCCCCCCCcceeEe
Q 016201 209 WDSI--PPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 209 W~~~--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
-... ......+....+..-++++++.|.... ....+..|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~ 252 (402)
T 2aq5_A 210 VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM--SERQVALWDT 252 (402)
T ss_dssp EEEEEECSSCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEEET
T ss_pred eeeeeccCCCCCcceEEEEcCCCcEEEEeccCC--CCceEEEEcC
Confidence 3322 111111122222233677777762110 1334555654
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=78.10 E-value=13 Score=32.61 Aligned_cols=70 Identities=7% Similarity=0.051 Sum_probs=43.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++||+.+..+ ..+.+||+.+.+...+...+. ..-.+++. -++++|+....+. .....+++||+.+
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHK---ANPAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSS---SSEEEEEECTTSCEEEEECTTS----SSCCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCC---CCcceEEECCCCcEEEEeCCCC----CCCceEEEEeCCC
Confidence 56788876533 468999999988776532111 12233443 3678888753211 1135799999988
Q ss_pred CCeE
Q 016201 207 RKWD 210 (393)
Q Consensus 207 ~~W~ 210 (393)
..-+
T Consensus 122 ~~~~ 125 (333)
T 2dg1_A 122 DNLQ 125 (333)
T ss_dssp CSCE
T ss_pred CEEE
Confidence 7765
No 190
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=77.99 E-value=31 Score=31.26 Aligned_cols=24 Identities=8% Similarity=0.104 Sum_probs=17.0
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCce
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW 157 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 157 (393)
++++++.|+.++ .+..||+.+.+-
T Consensus 218 ~~~~l~~~s~d~------~v~iwd~~~~~~ 241 (393)
T 1erj_A 218 DGKYIAAGSLDR------AVRVWDSETGFL 241 (393)
T ss_dssp TCCEEEEEETTS------CEEEEETTTCCE
T ss_pred CCCEEEEEcCCC------cEEEEECCCCcE
Confidence 567888887653 478889887653
No 191
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=77.81 E-value=34 Score=30.10 Aligned_cols=177 Identities=8% Similarity=0.021 Sum_probs=76.1
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEEecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeE-
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVVIPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWE- 110 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~- 110 (393)
++.+++.|+. ++ .+..||+.+..-..+...... .....++...+............+..+|..+.+-.
T Consensus 138 ~~~~l~s~s~-dg-------~i~~wd~~~~~~~~~~~~~~~---~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 138 NTEYFIWADN-RG-------TIGFQSYEDDSQYIVHSAKSD---VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS 206 (343)
T ss_dssp -CCEEEEEET-TC-------CEEEEESSSSCEEEEECCCSS---CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC
T ss_pred CCCEEEEEeC-CC-------cEEEEECCCCcEEEEEecCCC---CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc
Confidence 4556777777 66 788899877665433221111 11122222222111111112336777777665421
Q ss_pred -EcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceE-eCCCCCCC-CCcceeEEEE-eCCEEEEE
Q 016201 111 -QMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV-DRFDMPKD-MAHSHLGVVS-DGRYIYIV 184 (393)
Q Consensus 111 -~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~-~~r~~~~~~~-~~~~iyv~ 184 (393)
.+.. . ....-..+.+ ++..++.|+ ++ .+..||+.+.+-. .+..+... ......+++. .+++.++.
T Consensus 207 ~~~~~-~-h~~~v~~l~fs~~g~~l~s~~-~~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 207 SRFPV-D-EEAKIKEVKFADNGYWMVVEC-DQ------TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIA 277 (343)
T ss_dssp EECCC-C-TTSCEEEEEECTTSSEEEEEE-SS------BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEE
T ss_pred cEEec-c-CCCCEEEEEEeCCCCEEEEEe-CC------eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEE
Confidence 1211 0 1111112222 456666666 32 4888998775421 12221100 0011112333 35556666
Q ss_pred ece-eCCCCCCCCCeeEEEeCCCCCeEe----CCCCCC---CCCCceEEEECCEEEEE
Q 016201 185 SGQ-YGPQCRGPTSRTFVLDSETRKWDS----IPPLPS---PRYSPATQLWRGRLHVM 234 (393)
Q Consensus 185 GG~-~~~~~~~~~~~v~~yd~~~~~W~~----~~~~p~---~r~~~~~~~~~~~iyv~ 234 (393)
|+. ++ .-.+|.|+.....|.. .-..+. ......++..++.+.++
T Consensus 278 ~s~~d~------~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 278 YSNESN------SLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EETTTT------EEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred ecCCCC------cEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEE
Confidence 432 11 2335555556777987 222221 22223334556666655
No 192
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=77.79 E-value=27 Score=33.94 Aligned_cols=97 Identities=19% Similarity=0.278 Sum_probs=53.0
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeC-CCCC--eEeCCCCCCC--------CCCceEEEECCEEEEEccCCCCCCC
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDS-ETRK--WDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRHT 243 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~-~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~ 243 (393)
++.++.||+.... ...++++|. .+.+ |+.-...+.. ....+.++.+++||+... .
T Consensus 59 ~v~~g~vyv~~~~--------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------d 124 (571)
T 2ad6_A 59 LVIGDMMYVHSAF--------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------N 124 (571)
T ss_dssp EEETTEEEEECST--------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------T
T ss_pred EEECCEEEEEeCC--------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------C
Confidence 4579999998631 245899998 6654 8875433211 112345677899988742 1
Q ss_pred CCcceeEeeeeccccccCCeEEeccCCC--CCCceeEEEECCEEEEEcC
Q 016201 244 PGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 244 ~~~~~~~~~~~d~~~~~~~W~~~~~~p~--~~~~~~~~~~~~~iyv~GG 290 (393)
..+.++| .......|+.....+. .....+-++.++++|+..+
T Consensus 125 g~l~alD-----~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 125 GHLLALD-----AKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp SEEEEEE-----TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred CEEEEEE-----CCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 2233333 2223446876432111 1122234557899887653
No 193
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.72 E-value=27 Score=31.14 Aligned_cols=64 Identities=3% Similarity=-0.072 Sum_probs=35.9
Q ss_pred ceEEEEECCCCceEeCCCCCCCCCcceeEEEEe-CCE-EEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC
Q 016201 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (393)
Q Consensus 145 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (393)
..++.+|+.+.+...+...+. ........- +++ |++... .... .....++.+|+.+..+..+..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~---~~~~~~~sp~dg~~l~~~~~-~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTA---WLGHPIYRPFDDSTVGFCHE-GPHD--LVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEEC-SCSS--SCSCCCEEEETTSCCCEESSC
T ss_pred ceEEEEECCCCcEEeeccCCc---ccccceECCCCCCEEEEEec-CCCC--CCCceEEEEECCCCceeEeec
Confidence 578999999888776653221 222222222 344 444432 1111 113579999998887777654
No 194
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=77.42 E-value=25 Score=34.98 Aligned_cols=98 Identities=19% Similarity=0.291 Sum_probs=57.6
Q ss_pred ccEEEECCEEEEEecCCCCCCccceEEEEECCCC--ceEeCCCCCCCCC------cceeEEEEeCCEEEEEeceeCCCCC
Q 016201 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDMA------HSHLGVVSDGRYIYIVSGQYGPQCR 193 (393)
Q Consensus 122 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~~ 193 (393)
.+.++.++.||+.... ..+..+|..+. .|+.-...+.... ....+.++.+++||+...
T Consensus 60 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------- 125 (668)
T ss_dssp CCCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------
T ss_pred cCCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------
Confidence 4446779999997652 45888888765 4876433221100 011234567889888642
Q ss_pred CCCCeeEEEeCCCCC--eEeCCCCCC--CCCCceEEEECCEEEEEc
Q 016201 194 GPTSRTFVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVMG 235 (393)
Q Consensus 194 ~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~G 235 (393)
...++.+|..+.+ |+....-+. .....+-++.++++|+..
T Consensus 126 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 126 --DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp --TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECC
T ss_pred --CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeC
Confidence 3568999988765 876432111 112233456788888753
No 195
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=76.85 E-value=27 Score=34.84 Aligned_cols=98 Identities=16% Similarity=0.207 Sum_probs=57.7
Q ss_pred ccEEEECCEEEEEecCCCCCCccceEEEEECCCC--ceEeCCCCCCCCC------cceeEEEEeCCEEEEEeceeCCCCC
Q 016201 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDMA------HSHLGVVSDGRYIYIVSGQYGPQCR 193 (393)
Q Consensus 122 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~------r~~~~~~~~~~~iyv~GG~~~~~~~ 193 (393)
.+.++.++.||+.... ..+..+|..+. .|+.-...+.... ....+.++.+++||+...
T Consensus 64 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------- 129 (689)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred ecCEEECCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------
Confidence 3446679999997542 45888998765 4876433321100 011234567899988642
Q ss_pred CCCCeeEEEeCCCCC--eEeCCC-CCC--CCCCceEEEECCEEEEEc
Q 016201 194 GPTSRTFVLDSETRK--WDSIPP-LPS--PRYSPATQLWRGRLHVMG 235 (393)
Q Consensus 194 ~~~~~v~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~G 235 (393)
...++.+|..|.+ |+.... -+. .....+-++.++.+|+-.
T Consensus 130 --dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~ 174 (689)
T 1yiq_A 130 --DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGN 174 (689)
T ss_dssp --TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECC
T ss_pred --CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEe
Confidence 3568899988765 876442 111 112223456789888743
No 196
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=76.53 E-value=24 Score=34.00 Aligned_cols=91 Identities=10% Similarity=0.071 Sum_probs=44.5
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-C-CEEEEEecCCCCCCccceEEEEEC--CCCceEeCCCCCCCCCcceeE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-K-NLFYVFAGYGSLDYVHSHVDVYNF--TDNKWVDRFDMPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~~~r~~~~ 173 (393)
.+..+|..+.+-... ++....-|.++.. + ..||+.+. + ..+.+||+ .+.+ .+..++.. ..-..
T Consensus 160 ~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~-d------~~V~v~D~~~~t~~--~~~~i~~g--~~p~~ 226 (543)
T 1nir_A 160 QIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR-D------ARIDMIDLWAKEPT--KVAEIKIG--IEARS 226 (543)
T ss_dssp EEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEET-T------SEEEEEETTSSSCE--EEEEEECC--SEEEE
T ss_pred eEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEECC-C------CeEEEEECcCCCCc--EEEEEecC--CCcce
Confidence 677778776653221 1111112333222 3 45666553 2 46899999 5544 23333322 22223
Q ss_pred EEEe-----CC-EEEEEeceeCCCCCCCCCeeEEEeCCCCCe
Q 016201 174 VVSD-----GR-YIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (393)
Q Consensus 174 ~~~~-----~~-~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (393)
++.. ++ .+|+.. .. ...+..+|..+.+-
T Consensus 227 va~sp~~~~dg~~l~v~~-~~-------~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGA-YW-------PPQFAIMDGETLEP 260 (543)
T ss_dssp EEECCSTTCTTTEEEEEE-EE-------SSEEEEEETTTCCE
T ss_pred EEeCCCcCCCCCEEEEEE-cc-------CCeEEEEecccccc
Confidence 3332 44 555543 22 34577888877653
No 197
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=76.16 E-value=26 Score=28.74 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=49.1
Q ss_pred cEEEECCEEEEEecCCCCCCccceEEEEECCC--CceEe--C----CCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCC
Q 016201 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVD--R----FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCR 193 (393)
Q Consensus 123 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~--~----~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 193 (393)
+++.+++++|++=| +.+|+++... ..... + +.+|.. -.++... .++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~---IDAa~~~~~~~~~yfFkG------- 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPRK---LDSVFEEPLSKKLFFFSG------- 72 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS---CSEEEECTTTCCEEEEET-------
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCCC---ccEEEEECCCCeEEEEeC-------
Confidence 45667999999976 4578887654 22211 1 234432 2323222 3688999976
Q ss_pred CCCCeeEEEeCCCCCe-EeCCC--CCCCCCCceEEE--ECCEEEEEccC
Q 016201 194 GPTSRTFVLDSETRKW-DSIPP--LPSPRYSPATQL--WRGRLHVMGGS 237 (393)
Q Consensus 194 ~~~~~v~~yd~~~~~W-~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~ 237 (393)
+..|+|+..+..- ..+.. +|......-+++ .++++|+|-|.
T Consensus 73 ---~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~ 118 (195)
T 1itv_A 73 ---RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR 118 (195)
T ss_dssp ---TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT
T ss_pred ---CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC
Confidence 4467777542111 11211 232111222333 36899999663
No 198
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=75.95 E-value=24 Score=35.09 Aligned_cols=68 Identities=7% Similarity=-0.010 Sum_probs=39.1
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCC---ceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN---KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
+++.++++.. ..++++|+.+. +-..+..... ........-+++..+++. ...++.+|.
T Consensus 119 Dg~~l~~~~~-------~~i~~~d~~~~~~~~~~~l~~~~~---~~~~~~~SPDG~~la~~~---------~~~i~~~d~ 179 (741)
T 2ecf_A 119 DAQRLLFPLG-------GELYLYDLKQEGKAAVRQLTHGEG---FATDAKLSPKGGFVSFIR---------GRNLWVIDL 179 (741)
T ss_dssp TSSEEEEEET-------TEEEEEESSSCSTTSCCBCCCSSS---CEEEEEECTTSSEEEEEE---------TTEEEEEET
T ss_pred CCCEEEEEeC-------CcEEEEECCCCCcceEEEcccCCc---ccccccCCCCCCEEEEEe---------CCcEEEEec
Confidence 5555555543 57999999887 5444433221 222222334565555542 236999999
Q ss_pred CCCCeEeCCC
Q 016201 205 ETRKWDSIPP 214 (393)
Q Consensus 205 ~~~~W~~~~~ 214 (393)
.+.+...+..
T Consensus 180 ~~g~~~~~~~ 189 (741)
T 2ecf_A 180 ASGRQMQLTA 189 (741)
T ss_dssp TTTEEEECCC
T ss_pred CCCCEEEecc
Confidence 8887766653
No 199
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=75.70 E-value=65 Score=31.76 Aligned_cols=62 Identities=16% Similarity=0.153 Sum_probs=33.8
Q ss_pred EEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC
Q 016201 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 130 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
.+++.|+.+ ..+.+||+.+.+-... +... ...-.+++. -++++++.|+.+ ..+..||..+.+
T Consensus 532 ~~l~s~s~d------~~v~vwd~~~~~~~~~--~~~h-~~~v~~v~~spdg~~l~sg~~D--------g~i~iwd~~~~~ 594 (694)
T 3dm0_A 532 PTIVSASWD------KTVKVWNLSNCKLRST--LAGH-TGYVSTVAVSPDGSLCASGGKD--------GVVLLWDLAEGK 594 (694)
T ss_dssp CEEEEEETT------SCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------SBCEEEETTTTE
T ss_pred ceEEEEeCC------CeEEEEECCCCcEEEE--EcCC-CCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCc
Confidence 456667655 3478889887654321 1110 011222232 366777777643 347778887764
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=75.61 E-value=61 Score=31.43 Aligned_cols=176 Identities=6% Similarity=-0.122 Sum_probs=77.7
Q ss_pred ccEEEEecCCCCCCCCcccceeeeeecCCCceEE-ecCCCCCccccccceeEEecCCcchhhHHhhcceeeccCCCCCeE
Q 016201 32 ADFMWASSSSSFSSSSAHLSVASNWALEKSGVVV-IPHVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWE 110 (393)
Q Consensus 32 ~~~ly~~GG~~~g~~~~~~~~~~~~d~~~~~W~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 110 (393)
++.+|+.... ++ .+..+|+.+.+-.. ++. .. ..+++.+-.+....--......+..+|....+-+
T Consensus 166 ~~~~~V~~~~-~~-------~V~viD~~t~~v~~~i~~-g~-----~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~ 231 (567)
T 1qks_A 166 ENLFSVTLRD-AG-------QIALIDGSTYEIKTVLDT-GY-----AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT 231 (567)
T ss_dssp GGEEEEEETT-TT-------EEEEEETTTCCEEEEEEC-SS-----CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC
T ss_pred CceEEEEeCC-CC-------eEEEEECCCCeEEEEEeC-CC-----CccceEECCCCCEEEEEcCCCeEEEEECCCCCCc
Confidence 4567777654 44 78889988775443 322 11 1223332222110000001236888888511112
Q ss_pred EcCCCCccccCccEEEE-----CC-EEEEEecCCCCCCccceEEEEECCCCceEe-CCC--CCC------CCCcceeEEE
Q 016201 111 QMPSAPVPRLDGAAIQI-----KN-LFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFD--MPK------DMAHSHLGVV 175 (393)
Q Consensus 111 ~~~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~--~~~------~~~r~~~~~~ 175 (393)
.+..++....-..++.. ++ .+|+..-. ...+.++|..+.+=.. ++. ++. |.+|....++
T Consensus 232 ~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 232 TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred EeEEEecCCCCceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 22222211111122333 34 57765332 2567788876654222 111 100 1123333333
Q ss_pred EeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CC-EEEEE
Q 016201 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RG-RLHVM 234 (393)
Q Consensus 176 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~ 234 (393)
..++..+++-- .....++..|..+.....+..++..+..|..... ++ ++|+.
T Consensus 306 s~~~~~~vv~~-------~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 306 SHYRPEFIVNV-------KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp CSSSSEEEEEE-------TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEe-------cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 33444444421 1246688888877655444444444554444433 33 34444
No 201
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=75.50 E-value=61 Score=31.40 Aligned_cols=98 Identities=9% Similarity=-0.094 Sum_probs=47.4
Q ss_pred ceeeccCCCCCeEEcCCCCc-cccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE
Q 016201 98 TFADLPAPDLEWEQMPSAPV-PRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 176 (393)
.+..+|..+.+....-.... .......+..++..++.++.++ .+..+|+.+.+-...-.-.. ..-.+++.
T Consensus 262 ~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~------~i~~~~~~~~~~~~~~~gh~---~~v~~l~~ 332 (611)
T 1nr0_A 262 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG------FINFVNPELGSIDQVRYGHN---KAITALSS 332 (611)
T ss_dssp EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC------CEEEEETTTTEEEEEECCCS---SCEEEEEE
T ss_pred eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC------cEEEEeCCCCCcceEEcCCC---CCEEEEEE
Confidence 56777776654432211111 1111222334666666666543 46778887765322111111 11222222
Q ss_pred -eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeC
Q 016201 177 -DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (393)
Q Consensus 177 -~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 212 (393)
-+++..+.|+.+ ..+..+|..+..-...
T Consensus 333 spdg~~l~s~s~D--------~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 333 SADGKTLFSADAE--------GHINSWDISTGISNRV 361 (611)
T ss_dssp CTTSSEEEEEETT--------SCEEEEETTTCCEEEC
T ss_pred eCCCCEEEEEeCC--------CcEEEEECCCCceeee
Confidence 356666666543 3477888887765443
No 202
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=75.37 E-value=51 Score=32.96 Aligned_cols=116 Identities=14% Similarity=0.071 Sum_probs=56.0
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCC----CceEeCCCCCCCCCcce
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTD----NKWVDRFDMPKDMAHSH 171 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~~~~~~~~~r~~ 171 (393)
.+..++........+.. ..+.-++++.. ++.||+.--. ...|.++++.+ ..-..+ +.... ..-
T Consensus 387 ~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~------~~~I~~~~~~g~~~~~~~~~~--i~~~~-~~P 455 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTV--ISRDI-QAP 455 (699)
T ss_dssp C-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTT------TTSBEEEESCCCCC-CCCCCB--CCSCC---C
T ss_pred ceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecC------CCeEEEEecCCCCCCcceEEE--EeCCC-CCc
Confidence 34455555544443322 22223344443 5789986321 24588888875 111111 11111 111
Q ss_pred eEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC--CCCCCCCceEEE--ECCEEEEEc
Q 016201 172 LGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP--LPSPRYSPATQL--WRGRLHVMG 235 (393)
Q Consensus 172 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~G 235 (393)
.++++ .++.||+.-. ....+.++++....-+.+.. +..|+ .+++ .++.||+.-
T Consensus 456 ~glavD~~~g~LY~tD~--------~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td 514 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTD 514 (699)
T ss_dssp CCEECCCSSSBCEECCT--------TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECC
T ss_pred ceEEEEeeCCcEEEEec--------cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcc
Confidence 23343 5788998731 14568889988765444322 23332 2333 256788763
No 203
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=74.91 E-value=20 Score=31.76 Aligned_cols=59 Identities=14% Similarity=0.066 Sum_probs=29.2
Q ss_pred CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEe-CCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS-IPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
++.+.+.|+.+ ..+..||..+.+... +.... ..-.+++.. +++.++.||.+ ..+..|++
T Consensus 87 ~~~~l~s~s~D--------~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~ 147 (343)
T 2xzm_R 87 ENCFAISSSWD--------KTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPDNRQILSAGAE-----REIKLWNI 147 (343)
T ss_dssp STTEEEEEETT--------SEEEEEETTSSCEEEEEECCC--SCEEEEEECSSTTEEEEEETT-----SCEEEEES
T ss_pred CCCEEEEEcCC--------CcEEEEECCCCcEEEEEcCCC--CcEEEEEECCCCCEEEEEcCC-----CEEEEEec
Confidence 45566666532 457788887765322 11111 111122222 45566666653 45666664
No 204
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=74.20 E-value=32 Score=34.31 Aligned_cols=95 Identities=18% Similarity=0.259 Sum_probs=52.8
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCC--------CCCceEEEECCEEEEEccCCCCCCCC
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRHTP 244 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~ 244 (393)
++.++.||+... ...++++|..+.+ |+.-...+.. ....+.++.+++||+... ..
T Consensus 67 ~v~~g~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg 131 (689)
T 1yiq_A 67 IVVDGVMYTTGP---------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DG 131 (689)
T ss_dssp EEETTEEEEECG---------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TS
T ss_pred EEECCEEEEEcC---------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CC
Confidence 467999999864 3458899987665 8765433211 112234667888887642 12
Q ss_pred CcceeEeeeeccccccCCeEEecc-CCC--CCCceeEEEECCEEEEEc
Q 016201 245 GLEHWSIAVKDGKALEKAWRTEIP-IPR--GGPHRACFVFNDRLFVVG 289 (393)
Q Consensus 245 ~~~~~~~~~~d~~~~~~~W~~~~~-~p~--~~~~~~~~~~~~~iyv~G 289 (393)
.+.++| .+.....|+.... -+. .....+-++.++++|+..
T Consensus 132 ~l~AlD-----a~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~ 174 (689)
T 1yiq_A 132 RLEAID-----AKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGN 174 (689)
T ss_dssp EEEEEE-----TTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECC
T ss_pred EEEEEE-----CCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEe
Confidence 333333 2233445876543 111 122234466799988743
No 205
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=74.03 E-value=12 Score=34.44 Aligned_cols=83 Identities=11% Similarity=0.304 Sum_probs=45.1
Q ss_pred CeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCC
Q 016201 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGP 274 (393)
Q Consensus 197 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~ 274 (393)
+.|+.+|..+.+-..+-.+......-.++.. ++++++.|+.+ ..+..|++ .+.+ .+..+.....
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~-------~~~~--~~~~~~~h~~ 190 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDV-------QQQK--RLRNMTSHSA 190 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEET-------TTTE--EEEEECCCSS
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEc-------CCCc--EEEEEeCCCC
Confidence 4588888888776554333322222222222 56777777764 46777774 3332 2222222222
Q ss_pred ceeEEEECCEEEEEcCCCC
Q 016201 275 HRACFVFNDRLFVVGGQEG 293 (393)
Q Consensus 275 ~~~~~~~~~~iyv~GG~~~ 293 (393)
...++..++.+++.|+.++
T Consensus 191 ~v~~~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 191 RVGSLSWNSYILSSGSRSG 209 (420)
T ss_dssp CEEEEEEETTEEEEEETTS
T ss_pred ceEEEeeCCCEEEEEeCCC
Confidence 2345566788888887764
No 206
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=73.88 E-value=79 Score=31.91 Aligned_cols=152 Identities=14% Similarity=0.164 Sum_probs=73.8
Q ss_pred ceeeccCCCCCeEEcCC-C-----Cc---cccCccEEEE----CCEEEEEecCCCCCCccceEEEEECCCCceEeCCC-C
Q 016201 98 TFADLPAPDLEWEQMPS-A-----PV---PRLDGAAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD-M 163 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~-~-----~~---~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~ 163 (393)
.+++..-...+|+++.. + +. .......+++ .+.||+..|..........+++=+=..++|+++.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 46666666779999876 3 21 1122222223 25788876532111111334443334678998752 1
Q ss_pred CCC---CCcc-eeEEEEe---CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCC---CCceEEEE----CC
Q 016201 164 PKD---MAHS-HLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPR---YSPATQLW----RG 229 (393)
Q Consensus 164 ~~~---~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~~----~~ 229 (393)
+.+ ..+. ...+++. .+.+|+.+. ...+++=+=.-.+|+++..++... .....+.+ .+
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~---------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~ 194 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR---------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVG 194 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS---------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTT
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC---------CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCC
Confidence 110 1121 1234443 367887641 123554444456899998766432 12222233 24
Q ss_pred EEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCC
Q 016201 230 RLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP 270 (393)
Q Consensus 230 ~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p 270 (393)
.||+.....+ ..|.- +....+|+.+...|
T Consensus 195 ~~~~~~~~~g-------~v~~S-----~DgG~tW~~~~~~~ 223 (763)
T 3a0f_A 195 TAYVASHAVG-------GLWVT-----WDGGANWSQVGGQP 223 (763)
T ss_dssp CEEEEESSTT-------CEEEE-----SSSSSSCEECTTCC
T ss_pred EEEEEEeCCC-------eEEEE-----CCCCCCccccCCCc
Confidence 6777643211 12211 02466899887555
No 207
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=73.75 E-value=34 Score=34.01 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=52.6
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCC--------CCCceEEEECCEEEEEccCCCCCCCC
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRHTP 244 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~ 244 (393)
++.++.||+... ...++++|..+.+ |+.-...+.. ....+.++.+++||+... ..
T Consensus 63 ~v~~g~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg 127 (668)
T 1kv9_A 63 LFHDGVIYTSMS---------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DG 127 (668)
T ss_dssp EEETTEEEEEEG---------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TS
T ss_pred EEECCEEEEECC---------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CC
Confidence 467999999864 3458888887655 8765433211 112334667888887642 12
Q ss_pred CcceeEeeeeccccccCCeEEeccCCC--CCCceeEEEECCEEEEEc
Q 016201 245 GLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRACFVFNDRLFVVG 289 (393)
Q Consensus 245 ~~~~~~~~~~d~~~~~~~W~~~~~~p~--~~~~~~~~~~~~~iyv~G 289 (393)
.+.++| .+.....|+.....+. .....+-++.++++|+..
T Consensus 128 ~l~alD-----~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 128 RLIALD-----AKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp EEEEEE-----TTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECC
T ss_pred EEEEEE-----CCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeC
Confidence 233333 2234456877542221 112224456788888753
No 208
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=73.49 E-value=51 Score=32.12 Aligned_cols=129 Identities=11% Similarity=0.055 Sum_probs=65.3
Q ss_pred ceeeccCCC------CCeEEcC-CCCccccCccEEEECCEEEEEecCCCCCC--ccceEEEEECC-CC---ceEeCCCCC
Q 016201 98 TFADLPAPD------LEWEQMP-SAPVPRLDGAAIQIKNLFYVFAGYGSLDY--VHSHVDVYNFT-DN---KWVDRFDMP 164 (393)
Q Consensus 98 ~~~~~~~~~------~~W~~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~-~~---~W~~~~~~~ 164 (393)
.++.+|..+ .+-+.+. .-+. ........-+++.+++...+.... ....++++|+. +. +.+.+..-.
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred EEEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 677888776 5555554 2111 111112223555444444332111 12579999998 56 444443211
Q ss_pred CCCCcceeEEE-EeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCC-------CceEEEE-CCEEEEEc
Q 016201 165 KDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRY-------SPATQLW-RGRLHVMG 235 (393)
Q Consensus 165 ~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-------~~~~~~~-~~~iyv~G 235 (393)
. ......+ .-++++|+.+..++ ...++++|+.+.+++.+.+...... ....+.. ++++++.+
T Consensus 241 ~---~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 241 E---EAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp T---BCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred C---ceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 1 1122222 33677777664321 3479999998888988765322110 1123333 66777665
Q ss_pred c
Q 016201 236 G 236 (393)
Q Consensus 236 G 236 (393)
.
T Consensus 312 ~ 312 (662)
T 3azo_A 312 G 312 (662)
T ss_dssp B
T ss_pred E
Confidence 4
No 209
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=72.39 E-value=41 Score=29.10 Aligned_cols=110 Identities=13% Similarity=0.210 Sum_probs=53.2
Q ss_pred eeeccCCCC-CeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECC-CCceEeCCCCCCCCCcceeEEEE
Q 016201 99 FADLPAPDL-EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 99 ~~~~~~~~~-~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~~~r~~~~~~~ 176 (393)
++.||+... .|+... +.. .....+..++.||+... + ..+.+||+. ...|+...+.+. ..+.+.
T Consensus 80 l~~~d~~g~~~~~~~~--~~~-~~~~~~~~~~~l~v~t~-~------~~l~~~d~~g~~~~~~~~~~~~-----~~~~~~ 144 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDT--KKA-IVSDFTIFEDILYVTSM-D------GHLYAINTDGTEKWRFKTKKAI-----YATPIV 144 (330)
T ss_dssp EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT-T------SEEEEECTTSCEEEEEECSSCC-----CSCCEE
T ss_pred EEEECCCCcEEEEEEC--CCC-cccCceEECCEEEEEec-C------CEEEEEcCCCCEEEEEcCCCce-----eeeeEE
Confidence 777776332 353221 111 12223344888887432 1 358889987 345665322111 112233
Q ss_pred e-CCEEEEEeceeCCCCCCCCCeeEEEeCCCC-CeEeCCCCCCCCCCceEEE-ECCEEEEEc
Q 016201 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR-KWDSIPPLPSPRYSPATQL-WRGRLHVMG 235 (393)
Q Consensus 177 ~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~-~~~~iyv~G 235 (393)
. ++.||+... ...+++||+... .|+...+ .+. ..+.+. .++.||+..
T Consensus 145 ~~~g~l~vgt~---------~~~l~~~d~~g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 145 SEDGTIYVGSN---------DNYLYAINPDGTEKWRFKTN--DAI-TSAASIGKDGTIYFGS 194 (330)
T ss_dssp CTTSCEEEECT---------TSEEEEECTTSCEEEEEECS--SCC-CSCCEECTTCCEEEES
T ss_pred cCCCEEEEEcC---------CCEEEEECCCCCEeEEEecC--CCc-eeeeEEcCCCEEEEEe
Confidence 3 677777431 245888998722 2654322 121 222333 366777654
No 210
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=71.94 E-value=37 Score=29.38 Aligned_cols=81 Identities=17% Similarity=0.223 Sum_probs=40.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCC-ceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCC-
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE- 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~- 205 (393)
++.||+.. .. +.+||+..+ .|+.. .+.+. ... .+..++.||+... ...+++||+.
T Consensus 70 ~g~l~v~t--------~~-l~~~d~~g~~~~~~~--~~~~~-~~~--~~~~~~~l~v~t~---------~~~l~~~d~~g 126 (330)
T 3hxj_A 70 DGTIYFGS--------DK-VYAINPDGTEKWRFD--TKKAI-VSD--FTIFEDILYVTSM---------DGHLYAINTDG 126 (330)
T ss_dssp TTEECCSS--------CE-EEEECCCGGGGGGSC--C------CC--EEEETTEEEEECT---------TSEEEEECTTS
T ss_pred CCcEEEec--------Cc-EEEECCCCcEEEEEE--CCCCc-ccC--ceEECCEEEEEec---------CCEEEEEcCCC
Confidence 67777721 12 888997433 35432 12111 112 2234888888531 2458889987
Q ss_pred CCCeEeCCCCCCCCCCceEEEE-CCEEEEE
Q 016201 206 TRKWDSIPPLPSPRYSPATQLW-RGRLHVM 234 (393)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~ 234 (393)
...|+...+.+ ...+.+.. ++.||+.
T Consensus 127 ~~~~~~~~~~~---~~~~~~~~~~g~l~vg 153 (330)
T 3hxj_A 127 TEKWRFKTKKA---IYATPIVSEDGTIYVG 153 (330)
T ss_dssp CEEEEEECSSC---CCSCCEECTTSCEEEE
T ss_pred CEEEEEcCCCc---eeeeeEEcCCCEEEEE
Confidence 33476543222 12222333 5667764
No 211
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=70.77 E-value=48 Score=33.22 Aligned_cols=117 Identities=12% Similarity=0.135 Sum_probs=59.1
Q ss_pred ceeeccCCCCCeEEcCCCCcc-ccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCC--CCCCCCCccee
Q 016201 98 TFADLPAPDLEWEQMPSAPVP-RLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHL 172 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~ 172 (393)
-+.+||+.+.+++....-... .....+... ++.|++.. . .-+.+||+.+++++... .+|. ..-.
T Consensus 494 Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~-------~Gl~~~~~~~~~~~~~~~~gl~~---~~i~ 562 (758)
T 3ott_A 494 GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H-------GGVMRINPKDESQQSISFGSFSN---NEIL 562 (758)
T ss_dssp SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T-------TEEEEECC--CCCCBCCCCC------CCEE
T ss_pred CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c-------CceEEEecCCCceEEecccCCCc---cceE
Confidence 355566666666554321111 011111222 46787643 1 23788999998887653 2332 2234
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCC
Q 016201 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (393)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 238 (393)
+++..++.|++.. .+-+.+|||++.+..... ++..... .++.. ++.|| +||..
T Consensus 563 ~i~~~~g~lWi~t----------~~Gl~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~G~l~-fG~~~ 617 (758)
T 3ott_A 563 SMTCVKNSIWVST----------TNGLWIIDRKTMDARQQN-MTNKRFT-SLLFDPKEDCVY-LGGAD 617 (758)
T ss_dssp EEEEETTEEEEEE----------SSCEEEEETTTCCEEEC---CCCCCS-EEEEETTTTEEE-EECBS
T ss_pred EEEECCCCEEEEC----------CCCeEEEcCCCceeEEec-CCCCcee-eeEEECCCCcEE-EecCC
Confidence 4555688888875 233889999998876543 3322222 23332 55655 55543
No 212
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=70.63 E-value=59 Score=29.06 Aligned_cols=81 Identities=7% Similarity=-0.077 Sum_probs=40.2
Q ss_pred ceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCC--C
Q 016201 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRY--S 221 (393)
Q Consensus 145 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~--~ 221 (393)
..+.++|+.+.+-........+ -.+++. -++++++.++ .+.+.+++..+..-........... .
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~----V~~v~fspdg~~l~s~s---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGE----VKDLHFSTDGKVVAYIT---------GSSLEVISTVTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSC----CCEEEECTTSSEEEEEC---------SSCEEEEETTTCCEEEEECCCCTTEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCCc----eEEEEEccCCceEEecc---------ceeEEEEEeccCcceeeeecCCCCCCEE
Confidence 3578889888765433222221 122332 3666666654 2336677777665433222111111 1
Q ss_pred ceEEEECCEEEEEccCC
Q 016201 222 PATQLWRGRLHVMGGSK 238 (393)
Q Consensus 222 ~~~~~~~~~iyv~GG~~ 238 (393)
.....-+++.++.++.+
T Consensus 224 ~v~fspdg~~l~~~s~d 240 (365)
T 4h5i_A 224 KINFIADDTVLIAASLK 240 (365)
T ss_dssp EEEEEETTEEEEEEEES
T ss_pred EEEEcCCCCEEEEEecC
Confidence 12223477888777654
No 213
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=70.42 E-value=81 Score=30.54 Aligned_cols=27 Identities=7% Similarity=0.044 Sum_probs=18.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR 160 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~ 160 (393)
+++.++.|+.++ .+..+|+.+.+-...
T Consensus 335 dg~~l~s~s~D~------~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 335 DGKTLFSADAEG------HINSWDISTGISNRV 361 (611)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCceeee
Confidence 566777777653 477889888765443
No 214
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=69.88 E-value=7.5 Score=36.02 Aligned_cols=20 Identities=20% Similarity=0.203 Sum_probs=13.2
Q ss_pred CEEEEEecCCCCCCccceEEEEECCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTD 154 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~ 154 (393)
+.+++.|+.++ .+.+||..+
T Consensus 141 ~~~lat~~~dg------~V~vwd~~~ 160 (430)
T 2xyi_A 141 ACVIATKTPSS------DVLVFDYTK 160 (430)
T ss_dssp EEEEEEECSSS------CEEEEEGGG
T ss_pred CcEEEEECCCC------cEEEEECCC
Confidence 46777777543 477788764
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=68.69 E-value=98 Score=30.84 Aligned_cols=178 Identities=11% Similarity=0.084 Sum_probs=82.6
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCC--------CccceEEEEECCCCce--EeCCCCCCC
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLD--------YVHSHVDVYNFTDNKW--VDRFDMPKD 166 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~--------~~~~~~~~yd~~~~~W--~~~~~~~~~ 166 (393)
.++.+|..+.+..... .+..+. ..++-. + +-++++..+... .....++++++.+..- ..+...+..
T Consensus 190 ~i~v~dl~tg~~~~~~-~~~~~~-~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 190 TVKFVGVADGKPLADE-LKWVKF-SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEETTTCCEEEEE-EEEEES-CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEECCCCCCCCcc-CCCcee-ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 6888888887764431 111111 122221 4 433333333221 1134688888876642 122222211
Q ss_pred CCcceeEE-EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC--C-eEeCCCCCCCCCCceEEEECCEEEEEccCCCCCC
Q 016201 167 MAHSHLGV-VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--K-WDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH 242 (393)
Q Consensus 167 ~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 242 (393)
+.....+ ..-+++..++...... ...++++.+|..+. . |+.+.+-..... ..+...++.||+...... .
T Consensus 267 -~~~~~~~~~SpDG~~l~~~~~~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~~--~ 339 (741)
T 1yr2_A 267 -PKRGHGASVSSDGRWVVITSSEGT---DPVNTVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDGA--P 339 (741)
T ss_dssp -TTCEEEEEECTTSCEEEEEEECTT---CSCCEEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTTC--T
T ss_pred -CeEEEEEEECCCCCEEEEEEEccC---CCcceEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCCC--C
Confidence 1112222 2345544444332221 12578999998876 6 777754322221 122345777887753321 1
Q ss_pred CCCcceeEeeeecccccc--CCeEEeccCCCCCCceeEEEECCEEEEEcCCCC
Q 016201 243 TPGLEHWSIAVKDGKALE--KAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293 (393)
Q Consensus 243 ~~~~~~~~~~~~d~~~~~--~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~ 293 (393)
...+..+++ .+ ..|+.+-+-..... ..+...++++++....++
T Consensus 340 ~~~l~~~d~-------~~~~~~~~~l~~~~~~~l-~~~~~~~~~lv~~~~~dg 384 (741)
T 1yr2_A 340 LKKIVRVDL-------SGSTPRFDTVVPESKDNL-ESVGIAGNRLFASYIHDA 384 (741)
T ss_dssp TCEEEEEEC-------SSSSCEEEEEECCCSSEE-EEEEEEBTEEEEEEEETT
T ss_pred CCEEEEEeC-------CCCccccEEEecCCCCeE-EEEEEECCEEEEEEEECC
Confidence 122333332 33 46887754332211 123344788888775554
No 216
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=66.78 E-value=36 Score=27.88 Aligned_cols=90 Identities=18% Similarity=0.215 Sum_probs=49.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCce-EeCCC--CCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VDRFD--MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
++++|++-| +..|+|+..+-.- +.|.. +|.....-.+++...++++|+|-| +..++||.
T Consensus 64 ~~~~yfFkG--------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg----------~~ywr~d~ 125 (195)
T 1itv_A 64 SKKLFFFSG--------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG----------RRLWRFDV 125 (195)
T ss_dssp TCCEEEEET--------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET----------TEEEEEET
T ss_pred CCeEEEEeC--------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC----------CEEEEEeC
Confidence 578888877 4577777442110 11222 222112334444445789999965 45889998
Q ss_pred CCCCeEe-----C----CCCCCCCCCceEEEECCEEEEEccC
Q 016201 205 ETRKWDS-----I----PPLPSPRYSPATQLWRGRLHVMGGS 237 (393)
Q Consensus 205 ~~~~W~~-----~----~~~p~~r~~~~~~~~~~~iyv~GG~ 237 (393)
.+++=.. + +.+| ..-.++...++.+|.+-|.
T Consensus 126 ~~~~~~~gyPr~i~~~w~Gvp--~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 126 KAQMVDPRSASEVDRMFPGVP--LDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp TTTEECGGGCEEHHHHSTTSC--SSCSEEEEETTEEEEEETT
T ss_pred CcccccCCCccChhhcCCCCC--CCCCEEEEeCCeEEEEeCC
Confidence 7653111 1 1222 2233555668999999764
No 217
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=66.74 E-value=64 Score=27.95 Aligned_cols=95 Identities=9% Similarity=0.191 Sum_probs=50.3
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE-CCEEEEEecCCCCCCccceEEEEECCCCc---eEeCCC----CCCCCCc
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFD----MPKDMAH 169 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~----~~~~~~r 169 (393)
.++.++..+.+.+.+...+..+.....+.. ++.+|+.-.. ...++++|+.+.+ |..-+. .+.....
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 377788777777666554433332233322 4567775321 2468999987642 311110 1110001
Q ss_pred ceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
...++...++.||+.- ...+.+++||+..
T Consensus 170 ~pngis~dg~~lyv~d--------~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 170 AANGLKRFGNFLYVSN--------TEKMLLLRIPVDS 198 (306)
T ss_dssp SEEEEEEETTEEEEEE--------TTTTEEEEEEBCT
T ss_pred cCCCcCcCCCEEEEEe--------CCCCEEEEEEeCC
Confidence 2223444566899884 1256799999875
No 218
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=66.07 E-value=78 Score=28.72 Aligned_cols=196 Identities=16% Similarity=0.102 Sum_probs=99.3
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCC--CCCCCCcceeE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--MPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~r~~~~ 173 (393)
.+..+++.....+.+.. ....-.+++.. ++.||+.--. ...+.++++.....+.+.. +..| .+.+
T Consensus 97 ~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p---~gla 165 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESP---GGLA 165 (386)
T ss_dssp CEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCCEEEEECSSCSCC---CCEE
T ss_pred cceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCCCc---cEEE
Confidence 45666666555444332 11112233333 5789987432 2568999998877655432 2222 1333
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCccee
Q 016201 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHW 249 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 249 (393)
+-..++.||+.-. ....++++++....-+.+. .+..|+ .+++- ++.||+.--.. ...++++
T Consensus 166 vd~~~g~lY~~d~--------~~~~I~~~~~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td~~~----~~~I~r~ 230 (386)
T 3v65_B 166 VDWVHDKLYWTDS--------GTSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN----TPRIEAS 230 (386)
T ss_dssp EETTTTEEEEEET--------TTTEEEECBTTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEECSS----SCEEEEE
T ss_pred EEeCCCeEEEEcC--------CCCeEEEEeCCCCceEEeecCCCCCCc---EEEEEcCCCeEEEeccCC----CCEEEEE
Confidence 3335889999852 1456888888765433332 222222 33443 67888874211 2344444
Q ss_pred EeeeeccccccCCeEEeccCCCCCCceeEEE--ECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCC-C
Q 016201 250 SIAVKDGKALEKAWRTEIPIPRGGPHRACFV--FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM-K 325 (393)
Q Consensus 250 ~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~-~ 325 (393)
++ ....-+.+.... -....+++. .+++||+.-... ..|+++| ... .
T Consensus 231 ~~-------dG~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~----------------------~~I~~~d~dG~~~ 280 (386)
T 3v65_B 231 SM-------DGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH----------------------HVIERANLDGSHR 280 (386)
T ss_dssp ET-------TSCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETTT----------------------TEEEEECTTSCSC
T ss_pred eC-------CCCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECCC----------------------CEEEEEeCCCCee
Confidence 42 222212221111 111123333 378999985432 2388888 432 3
Q ss_pred eEECC-CCCCCCCCcceeEEEECCEEEEEc
Q 016201 326 WKVLP-PMPKPNSHIECAWVIVNNSIIITG 354 (393)
Q Consensus 326 W~~~~-~~~~~r~~~~~~~~~~~~~i~v~G 354 (393)
-..+. .++.| .++++.++.||+.-
T Consensus 281 ~~~~~~~~~~P-----~giav~~~~ly~td 305 (386)
T 3v65_B 281 KAVISQGLPHP-----FAITVFEDSLYWTD 305 (386)
T ss_dssp EEEECSSCSSE-----EEEEEETTEEEEEE
T ss_pred EEEEECCCCCc-----eEEEEECCEEEEee
Confidence 32222 23332 45567899999974
No 219
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=65.36 E-value=1.2e+02 Score=30.48 Aligned_cols=226 Identities=15% Similarity=0.200 Sum_probs=109.8
Q ss_pred ceeeccCCCCCeEEcCCCCccc----cCccEEEEC----CEEEEEecCCCCCC-c-cceEEEEECCCCceEeCCC-CCCC
Q 016201 98 TFADLPAPDLEWEQMPSAPVPR----LDGAAIQIK----NLFYVFAGYGSLDY-V-HSHVDVYNFTDNKWVDRFD-MPKD 166 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r----~~~~~~~~~----~~iyv~GG~~~~~~-~-~~~~~~yd~~~~~W~~~~~-~~~~ 166 (393)
.+++.+-...+|+.+...+..+ .....+.++ +.||+..|...... . ...+++=.=..++|+++.. .+..
T Consensus 46 gv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~ 125 (737)
T 2cn3_A 46 GAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMG 125 (737)
T ss_dssp CEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCC
T ss_pred cEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccC
Confidence 6888888888999987643221 122233333 57998866321110 0 1224443334578998642 1110
Q ss_pred --C-Cc-ceeEEEEe---CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCC--------------CCceEE
Q 016201 167 --M-AH-SHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPR--------------YSPATQ 225 (393)
Q Consensus 167 --~-~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--------------~~~~~~ 225 (393)
. .+ ..+.+++. .+.||+... .+ ..+++=+=.-.+|+++..+|... .+...+
T Consensus 126 ~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g-------~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v 197 (737)
T 2cn3_A 126 GNMPGRSMGERLAIDPNDNRILYLGTR-CG-------NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWV 197 (737)
T ss_dssp TTSTTTTSCCCEEECSSCTTCEEEECS-TT-------CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEE
T ss_pred CCcCcccccceEEECCCCCCEEEEeec-cC-------CcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEE
Confidence 0 11 12344442 256666421 00 22444333456899988665321 112223
Q ss_pred EEC----------CEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE-CCEEEEEcCCCCC
Q 016201 226 LWR----------GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF-NDRLFVVGGQEGD 294 (393)
Q Consensus 226 ~~~----------~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~ 294 (393)
.++ +.||+.-... ....|.- . ....+|+.+..+|.....+.++.. ++.+|+..+....
T Consensus 198 ~~dp~~~~~~~~~~~v~~~~~~~------~~~v~~S--~---DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g 266 (737)
T 2cn3_A 198 VFDKSSSTPGNPTKTIYVGVADK------NESIYRS--T---DGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCG 266 (737)
T ss_dssp EECGGGSCTTSCCSCEEEEESCS------SCCEEEE--S---STTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCC
T ss_pred EcCCCCcccCCCCCEEEEEecCC------CccEEEE--c---CCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCC
Confidence 332 2666642111 0112221 0 256789998877764432333322 7889887543211
Q ss_pred CCCCCCCCccccccccceecCceEEeC-CCCCeEECCCCCCC--CCCcceeEEEE----CCEEEEEcC
Q 016201 295 FMAKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMPKP--NSHIECAWVIV----NNSIIITGG 355 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~~~--r~~~~~~~~~~----~~~i~v~GG 355 (393)
.. .. .-...+++++ ...+|+.+...|.. ...+..+.+.+ .+.||+.+.
T Consensus 267 ~y--------~~-----~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 267 PY--------DG-----NGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp SS--------CC-----SCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEE
T ss_pred cc--------cc-----ccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEec
Confidence 00 00 0023488887 66799998876542 12222222222 257887754
No 220
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=65.16 E-value=76 Score=28.29 Aligned_cols=108 Identities=1% Similarity=-0.128 Sum_probs=56.7
Q ss_pred EECCEEEEEecCCCCCCccceEEEEECCCCceEeCC--CCCCCCCcceeEEE-EeCCEEEEEeceeCCCCCCCCCeeEEE
Q 016201 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVL 202 (393)
Q Consensus 126 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~y 202 (393)
.-+++.++.++.+.... ..++.+|.......... .+... ...-.+++ .-++++++.|+.+ ..+..|
T Consensus 228 spdg~~l~~~s~d~~~~--~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spdg~~lasgs~D--------~~V~iw 296 (365)
T 4h5i_A 228 IADDTVLIAASLKKGKG--IVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMKGELAVLASND--------NSIALV 296 (365)
T ss_dssp EETTEEEEEEEESSSCC--EEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTTSCEEEEEETT--------SCEEEE
T ss_pred cCCCCEEEEEecCCcce--eEEeecccccceecceeeeeecCC-CCCeEeEEECCCCCceEEEcCC--------CEEEEE
Confidence 34788888887665432 24566776665544321 11111 01112222 3477888888643 348889
Q ss_pred eCCCCCeEeCCCCCCCCCCc-eEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 203 DSETRKWDSIPPLPSPRYSP-ATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 203 d~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
|..+.+- +......+... ..+.+ ++++++.|+. +..+.+|++
T Consensus 297 d~~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~-----D~tvrvw~i 341 (365)
T 4h5i_A 297 KLKDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSA-----ANTIHIIKL 341 (365)
T ss_dssp ETTTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEET-----TSEEEEEEC
T ss_pred ECCCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeC-----CCeEEEEEc
Confidence 9887542 22211122211 12222 6777777765 356777876
No 221
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=64.42 E-value=24 Score=33.96 Aligned_cols=59 Identities=12% Similarity=0.073 Sum_probs=35.6
Q ss_pred EEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC
Q 016201 147 VDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (393)
Q Consensus 147 ~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (393)
+..||+.+.+-+.+...+. ......-+|+..++++.+... ...++++|+.+.+.+.+..
T Consensus 134 ~~l~d~~~g~~~~l~~~~~-----~~~~~spDG~~la~~~~~~~~----~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG-----FGFVSDIRGDLIAGLGFFGGG----RVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEEETTEEEEEEEESS-----CEEEEEEETTEEEEEEEEETT----EEEEEEEETTTCCCEEECC
T ss_pred ceEEEccCCcEEEeecCCC-----ceEEECCCCCEEEEEEEcCCC----CeEEEEEcCCCCCceEeec
Confidence 3477888887766653322 222233456555555544322 2459999999988887654
No 222
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=64.09 E-value=96 Score=30.01 Aligned_cols=93 Identities=9% Similarity=0.055 Sum_probs=46.6
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEE
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~ 174 (393)
..+..+|..+.+-.. .++....-|.++.. +.++|+.+. + ..+.+||+.+.+-+.+..++.. .....+
T Consensus 177 ~~V~viD~~t~~v~~--~i~~g~~p~~v~~SpDGr~lyv~~~-d------g~V~viD~~~~t~~~v~~i~~G--~~P~~i 245 (567)
T 1qks_A 177 GQIALIDGSTYEIKT--VLDTGYAVHISRLSASGRYLFVIGR-D------GKVNMIDLWMKEPTTVAEIKIG--SEARSI 245 (567)
T ss_dssp TEEEEEETTTCCEEE--EEECSSCEEEEEECTTSCEEEEEET-T------SEEEEEETTSSSCCEEEEEECC--SEEEEE
T ss_pred CeEEEEECCCCeEEE--EEeCCCCccceEECCCCCEEEEEcC-C------CeEEEEECCCCCCcEeEEEecC--CCCcee
Confidence 378888887764322 12222222333322 456887642 1 4699999852222333333332 112233
Q ss_pred EEe-----C-CEEEEEeceeCCCCCCCCCeeEEEeCCCCC
Q 016201 175 VSD-----G-RYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 175 ~~~-----~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
+.. + ..+|+..-. .+.+..+|..+.+
T Consensus 246 a~s~~~~pDGk~l~v~n~~--------~~~v~ViD~~t~~ 277 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYW--------PPQYVIMDGETLE 277 (567)
T ss_dssp EECCSTTCTTTEEEEEEEE--------TTEEEEEETTTCC
T ss_pred EEccccCCCCCEEEEEEcc--------CCeEEEEECCCCc
Confidence 333 4 467766421 3557788877654
No 223
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=63.73 E-value=16 Score=35.22 Aligned_cols=75 Identities=9% Similarity=-0.035 Sum_probs=43.0
Q ss_pred ECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 127 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
-+++.+++++.+... ...++++|+.+.+.+.+...+. ........-+++.++.+..++ ...++++|+.+
T Consensus 159 pDG~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~~~~---~~~~~~~SpDG~~l~~~~~~~------~~~i~~~d~~~ 227 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDSGEG---SFSSASISPGMKVTAGLETAR------EARLVTVDPRD 227 (582)
T ss_dssp EETTEEEEEEEEETT--EEEEEEEETTTCCCEEECCSSC---EEEEEEECTTSCEEEEEECSS------CEEEEEECTTT
T ss_pred CCCCEEEEEEEcCCC--CeEEEEEcCCCCCceEeecCCC---ccccceECCCCCEEEEccCCC------eeEEEEEcCCC
Confidence 456666655543322 2459999999999887654332 112222233555444332111 35799999999
Q ss_pred CCeEeC
Q 016201 207 RKWDSI 212 (393)
Q Consensus 207 ~~W~~~ 212 (393)
.+.+.+
T Consensus 228 ~~~~~~ 233 (582)
T 3o4h_A 228 GSVEDL 233 (582)
T ss_dssp CCEEEC
T ss_pred CcEEEc
Confidence 887733
No 224
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=63.37 E-value=75 Score=30.89 Aligned_cols=52 Identities=23% Similarity=0.424 Sum_probs=33.1
Q ss_pred EEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCC---C---CCceEEEECCEEEEEc
Q 016201 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP---R---YSPATQLWRGRLHVMG 235 (393)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~---r---~~~~~~~~~~~iyv~G 235 (393)
++.++.||+... ...++++|..+.+ |+.-...+.. . ...+.++.+++||+..
T Consensus 65 ~v~~g~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t 124 (582)
T 1flg_A 65 IVSDGVIYVTAS---------YSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT 124 (582)
T ss_dssp EEETTEEEEEET---------TTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE
T ss_pred EEECCEEEEEcC---------CCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe
Confidence 567999999864 1348899987655 8765433321 1 1234467789988763
No 225
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=61.72 E-value=29 Score=31.42 Aligned_cols=100 Identities=8% Similarity=0.093 Sum_probs=52.0
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 206 (393)
+++.++.|+.+ ..+.+||+.+.+-...-.... ..-.+++. -++..++.|+. -..+..||..+
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~s~s~--------d~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQGHE---QDIYSLDYFPSGDKLVSGSG--------DRTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEccCC---CCEEEEEEcCCCCEEEEecC--------CCcEEEEECCC
Confidence 56777778765 358889988776433211111 11223333 24555566653 24578889887
Q ss_pred CCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 016201 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.+....-... .....++.. ++++++.|+.+ ..+..|++
T Consensus 197 ~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~ 236 (393)
T 1erj_A 197 GQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDS 236 (393)
T ss_dssp TEEEEEEECS--SCEEEEEECSTTCCEEEEEETT-----SCEEEEET
T ss_pred CeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCC-----CcEEEEEC
Confidence 6543322111 111122222 56777777764 45666664
No 226
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=61.30 E-value=99 Score=28.28 Aligned_cols=91 Identities=19% Similarity=0.128 Sum_probs=48.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
++.||+....+ ..+.++|+.+++-..+..... ....+....++.+|+.... + ...++++|+.+.
T Consensus 141 ~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~---~~~ia~~~~g~~l~~~d~~-~------~~~I~~~d~~~~ 204 (409)
T 3hrp_A 141 NNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFK---GGKPAVTKDKQRVYSIGWE-G------THTVYVYMKASG 204 (409)
T ss_dssp TTEEEEEETTT------TEEEEEETTTTEEEEEEETCC---BCBCEECTTSSEEEEEBSS-T------TCEEEEEEGGGT
T ss_pred CCCEEEEecCC------CcEEEEECCCCEEEEeeccCC---CCceeEecCCCcEEEEecC-C------CceEEEEEcCCC
Confidence 57899986522 468999999877665543322 1122333335567777521 1 126899998764
Q ss_pred C-eEeCCCC-C-CCCCCceEEEE--CCEEEEE
Q 016201 208 K-WDSIPPL-P-SPRYSPATQLW--RGRLHVM 234 (393)
Q Consensus 208 ~-W~~~~~~-p-~~r~~~~~~~~--~~~iyv~ 234 (393)
. ...+... + ....-+.+++. ++.||+.
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 3 2233111 1 11122233333 6789984
No 227
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=61.06 E-value=1.4e+02 Score=29.80 Aligned_cols=131 Identities=18% Similarity=0.136 Sum_probs=65.4
Q ss_pred ECCEEEEEecCCCCCCccceEEEEECCCCceEeCCC--CCCCCCcceeEEEE--eCCEEEEEeceeCCCCCCCCCeeEEE
Q 016201 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--MPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVL 202 (393)
Q Consensus 127 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~y 202 (393)
.++.||+.-. ....++++++....-+.+.. +..| + ++++ .++.||+.-- + ....++++
T Consensus 463 ~~g~LY~tD~------~~~~I~v~d~dg~~~~~l~~~~~~~P--~---giavDp~~g~ly~td~--~-----~~~~I~~~ 524 (699)
T 1n7d_A 463 IHSNIYWTDS------VLGTVSVADTKGVKRKTLFREQGSKP--R---AIVVDPVHGFMYWTDW--G-----TPAKIKKG 524 (699)
T ss_dssp SSSBCEECCT------TTSCEEEEBSSSCCEEEECCCSSCCC--C---CEECCSSSSCCEECCC--S-----SSCCEEBC
T ss_pred eCCcEEEEec------cCCeEEEEecCCCceEEEEeCCCCCc--c---eEEEccCCCcEEEccc--C-----CCCeEEEE
Confidence 3678888532 12568899988765444432 2222 2 2333 4678888741 0 12457777
Q ss_pred eCCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccC-CCCCCcee
Q 016201 203 DSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPI-PRGGPHRA 277 (393)
Q Consensus 203 d~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~-p~~~~~~~ 277 (393)
++....-+.+. .+..|. ++++- +++||+.-.. ...+.++++ + ...-+.+... .......+
T Consensus 525 ~~dG~~~~~l~~~~l~~Pn---Glavd~~~~~LY~aD~~-----~~~I~~~d~-----d--G~~~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 525 GLNGVDIYSLVTENIQWPN---GITLDLLSGRLYWVDSK-----LHSISSIDV-----N--GGNRKTILEDEKRLAHPFS 589 (699)
T ss_dssp CSSSCCCCEESCSSCSSCC---CEEECTTTCCEEEEETT-----TTEEEEECS-----S--SSCCEEECCCSSSCSSCCC
T ss_pred eCCCCCeeEEEeCCCCCcc---EEEEeccCCEEEEEecC-----CCeEEEEcc-----C--CCceEEEEecCCcCCCceE
Confidence 77654333322 222221 23332 5789987432 233443332 2 2222222221 11122336
Q ss_pred EEEECCEEEEEcC
Q 016201 278 CFVFNDRLFVVGG 290 (393)
Q Consensus 278 ~~~~~~~iyv~GG 290 (393)
+++.++.||+.-.
T Consensus 590 lavd~~~lywtd~ 602 (699)
T 1n7d_A 590 LAVFEDKVFWTDI 602 (699)
T ss_dssp CEEETTEEEEECS
T ss_pred eEEECCEEEEEeC
Confidence 6677889999874
No 228
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=60.92 E-value=37 Score=31.96 Aligned_cols=62 Identities=11% Similarity=0.038 Sum_probs=34.6
Q ss_pred cEEEECCEEEEEecCCCCCCccceEEEEECCCCceEe--C----CCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCC
Q 016201 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--R----FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGP 195 (393)
Q Consensus 123 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~----~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 195 (393)
+++.+++++|+|-|. ..|+++.....+.. + +.+|.. ..++... .++++|+|=|
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~LP~~---iDAa~~~~~~g~~~fFKg--------- 326 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQLPNG---LEAAYEFADRDEVRFFKG--------- 326 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTSCSS---CCEEEEEGGGTEEEEEET---------
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCCCCC---eeEEEEEcCCCeEEEEeC---------
Confidence 556789999999773 35665544333221 1 123331 1222222 3789999965
Q ss_pred CCeeEEEeCC
Q 016201 196 TSRTFVLDSE 205 (393)
Q Consensus 196 ~~~v~~yd~~ 205 (393)
+.+|+|+..
T Consensus 327 -~~~W~~~~~ 335 (450)
T 1su3_A 327 -NKYWAVQGQ 335 (450)
T ss_dssp -TEEEEEETT
T ss_pred -CEEEEecCC
Confidence 347777643
No 229
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=59.53 E-value=90 Score=27.26 Aligned_cols=114 Identities=14% Similarity=0.032 Sum_probs=59.2
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCC----CceEeC-C-CCCCCCCc
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTD----NKWVDR-F-DMPKDMAH 169 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~-~-~~~~~~~r 169 (393)
.+..+|........+.+ ....-.+++.. +++||+.--. ...+.++++.+ ..-+.+ + .+..
T Consensus 11 ~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~---- 78 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQA---- 78 (316)
T ss_dssp SEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSSCSC----
T ss_pred eEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCCCCC----
Confidence 45666666655544321 11222334443 5789998543 25688899876 222222 1 1222
Q ss_pred ceeEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEc
Q 016201 170 SHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMG 235 (393)
Q Consensus 170 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~G 235 (393)
-.++++ .++.||+.-. ....+.++|+....-+.+. .+..|+ .+++. ++.||+..
T Consensus 79 -p~glavd~~~~~ly~~d~--------~~~~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 79 -PDGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 138 (316)
T ss_dssp -CCEEEEETTTTEEEEEET--------TTTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEE
T ss_pred -cCEEEEeecCCeEEEEEC--------CCCEEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEc
Confidence 123444 5789999842 1456888998765433322 233332 33443 67899875
No 230
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=59.43 E-value=1e+02 Score=27.98 Aligned_cols=64 Identities=5% Similarity=0.049 Sum_probs=33.2
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCc-eEeCCCCCCCCCcceeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
++.+++.|+.+ ..+.+||+.+.. ...+..+... ...-.+++.. +..+++.|+.+ ..+..||.
T Consensus 243 ~~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~~l~tg~~d--------g~v~vwd~ 307 (430)
T 2xyi_A 243 HESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDAH-TAEVNCLSFNPYSEFILATGSAD--------KTVALWDL 307 (430)
T ss_dssp CTTEEEEEETT------SEEEEEETTCSCSSSCSEEEECC-SSCEEEEEECSSCTTEEEEEETT--------SEEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCCCcceeEeecC-CCCeEEEEeCCCCCCEEEEEeCC--------CeEEEEeC
Confidence 45677777754 458889988652 1111111110 0111122222 33478887643 44888888
Q ss_pred CC
Q 016201 205 ET 206 (393)
Q Consensus 205 ~~ 206 (393)
.+
T Consensus 308 ~~ 309 (430)
T 2xyi_A 308 RN 309 (430)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 231
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=59.17 E-value=78 Score=30.95 Aligned_cols=97 Identities=14% Similarity=0.205 Sum_probs=50.4
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCCeeEEEeC-CCCC--eEeCCCCCC-----CC---CCceEEE--ECCE----EEEEcc
Q 016201 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS-ETRK--WDSIPPLPS-----PR---YSPATQL--WRGR----LHVMGG 236 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~-~~~~--W~~~~~~p~-----~r---~~~~~~~--~~~~----iyv~GG 236 (393)
-++.++.||+.... ...++++|. .+.+ |+.-...+. .+ .....++ .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~--------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF--------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp CEEETTEEEEECST--------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred cEEECCEEEEEeCC--------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 34569999998631 245899998 6654 887554321 11 1123344 5666 877532
Q ss_pred CCCCCCCCCcceeEeeeeccccccCCeEEeccCC--CCCCceeEEEECCEEEEEc
Q 016201 237 SKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP--RGGPHRACFVFNDRLFVVG 289 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p--~~~~~~~~~~~~~~iyv~G 289 (393)
...+.++ |.+.....|+....-+ ......+-++.+++||+..
T Consensus 130 ------dg~l~Al-----Da~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 130 ------DGNVAAL-----NAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp ------TSEEEEE-----ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECC
T ss_pred ------CCEEEEE-----ECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEe
Confidence 1222222 2223344587643211 1112223456789887754
No 232
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=59.07 E-value=84 Score=31.10 Aligned_cols=86 Identities=15% Similarity=0.132 Sum_probs=50.2
Q ss_pred cceEEEEECCC------C--ceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC---CeEeC
Q 016201 144 HSHVDVYNFTD------N--KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR---KWDSI 212 (393)
Q Consensus 144 ~~~~~~yd~~~------~--~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~---~W~~~ 212 (393)
.+.++.+|+.+ . .++.+..-.. .........++.||+.+..+ .+...++.+|+.+. .|+.+
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~---~~~~~~s~dg~~l~~~s~~~-----~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFE---GEYDYVTNEGTVFTFKTNRH-----SPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSS---SCEEEEEEETTEEEEEECTT-----CTTCEEEEEETTSCCGGGCEEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCC---cEEEEEeccCCEEEEEECCC-----CCCCEEEEEeCCCCCcccceec
Confidence 36789999876 3 5777654322 11223444678888886432 22567999998875 48776
Q ss_pred CCCCCCCCCceEEEE-CCEEEEEccC
Q 016201 213 PPLPSPRYSPATQLW-RGRLHVMGGS 237 (393)
Q Consensus 213 ~~~p~~r~~~~~~~~-~~~iyv~GG~ 237 (393)
.+-........+... ++.+++....
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 542221122234455 6777777544
No 233
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=59.05 E-value=85 Score=26.83 Aligned_cols=67 Identities=10% Similarity=0.057 Sum_probs=35.7
Q ss_pred EEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeC-CEEEEEeceeCCCCCCCCCeeEEEeCCCCC
Q 016201 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG-RYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 130 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
.+++.++.+ ..+..+|+.+.+-...-.++....+.......-+ +.+|+.+.. ...+..+|+.+.+
T Consensus 2 ~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~~ 67 (337)
T 1pby_B 2 DYILAPARP------DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--------SESLVKIDLVTGE 67 (337)
T ss_dssp EEEEEEETT------TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT--------TTEEEEEETTTCC
T ss_pred cEEEEcCCC------CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC--------CCeEEEEECCCCC
Confidence 345555533 4688899988765432222220001111222234 478887631 3569999998876
Q ss_pred eE
Q 016201 209 WD 210 (393)
Q Consensus 209 W~ 210 (393)
-.
T Consensus 68 ~~ 69 (337)
T 1pby_B 68 TL 69 (337)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 234
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=56.81 E-value=1.7e+02 Score=29.64 Aligned_cols=171 Identities=12% Similarity=0.052 Sum_probs=85.1
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCC----ceEe-CC-CCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN----KWVD-RF-DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~-~~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (393)
+++||+.-.. ...+.++++... .... +. .+..| .+.++-..+++||+.-. ....|++
T Consensus 435 ~~~lY~sD~~------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P---~GLAvD~~~~~LY~tD~--------~~~~I~v 497 (791)
T 3m0c_C 435 SNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDS--------VLGTVSV 497 (791)
T ss_dssp TTEEEEEETT------TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEET--------TTTEEEE
T ss_pred CCeeEEeecc------ceeEEEEeccCCCCCcceeEEEecCCCCc---ceeeeeecCCcEEEEec--------CCCeEEE
Confidence 5789987542 245777887652 2222 22 22222 13333335789999842 2567999
Q ss_pred EeCCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCce-
Q 016201 202 LDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHR- 276 (393)
Q Consensus 202 yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~- 276 (393)
+++....-+.+. .+..|+ .+++- ++.||+.--.. ...+++.++ ....=+.+.. ......
T Consensus 498 ~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g~----~~~I~~~~~-------dG~~~~~lv~--~~l~~P~ 561 (791)
T 3m0c_C 498 ADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT----PAKIKKGGL-------NGVDIYSLVT--ENIQWPN 561 (791)
T ss_dssp EETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS----SCEEEEEET-------TSCCEEEEEC--SSCSCEE
T ss_pred EeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCCC----CCeEEEEec-------CCCceEEEEe--CCCCCce
Confidence 999876654442 333332 33442 57899874111 134444443 2221122211 111122
Q ss_pred eEEE--ECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CC-CCeEECCCCCCCCCCcceeEEEECCEEEE
Q 016201 277 ACFV--FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DE-MKWKVLPPMPKPNSHIECAWVIVNNSIII 352 (393)
Q Consensus 277 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~-~~W~~~~~~~~~r~~~~~~~~~~~~~i~v 352 (393)
++++ .+++||+.-... ..|+++| .. .....+... ....+..++++.+++||+
T Consensus 562 GLavD~~~~~LYwaD~~~----------------------~~I~~~d~dG~~~~~v~~~~--~~l~~P~glav~~~~lYw 617 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDSKL----------------------HSISSIDVNGGNRKTILEDE--KRLAHPFSLAVFEDKVFW 617 (791)
T ss_dssp EEEEETTTTEEEEEETTT----------------------TEEEEEETTSCSCEEEEECT--TTTSSEEEEEEETTEEEE
T ss_pred EEEEecCCCeEEEEeCCC----------------------CcEEEEecCCCceEEEecCC--CccCCCCEEEEeCCEEEE
Confidence 3333 268999985332 2377777 33 344443210 011123566788999999
Q ss_pred EcC
Q 016201 353 TGG 355 (393)
Q Consensus 353 ~GG 355 (393)
.--
T Consensus 618 tD~ 620 (791)
T 3m0c_C 618 TDI 620 (791)
T ss_dssp EET
T ss_pred EEC
Confidence 743
No 235
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=56.00 E-value=62 Score=28.38 Aligned_cols=94 Identities=5% Similarity=-0.111 Sum_probs=47.2
Q ss_pred ceeeccCCCCCeEEcCCCCccc--cCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPR--LDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r--~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~ 173 (393)
.++.+|+.+.+.+.+...+... .......+ ++++|+.............+++|| +.+.+.+..-. .. ..+
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~---~~-~~~ 183 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI---SI-PNS 183 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE---SS-EEE
T ss_pred CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC---cc-cCC
Confidence 5888998888877664432111 11111222 567877432211112235788998 45555432110 11 123
Q ss_pred EEEe-CC-EEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 174 VVSD-GR-YIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 174 ~~~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
++.. ++ .+|+... ....+++||..
T Consensus 184 i~~s~dg~~lyv~~~--------~~~~I~~~d~~ 209 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDT--------KVNRLMRVPLD 209 (326)
T ss_dssp EEECTTSCEEEEEET--------TTCEEEEEEBC
T ss_pred eEEcCCCCEEEEEEC--------CCCEEEEEEcc
Confidence 3332 34 6777642 13568888875
No 236
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=54.76 E-value=1.2e+02 Score=27.06 Aligned_cols=196 Identities=16% Similarity=0.106 Sum_probs=99.6
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCC--CCCCCCcceeE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--MPKDMAHSHLG 173 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~r~~~~ 173 (393)
.+.++++.....+.+.+- ...-.+++.. ++.||+.--. ...+.++++.+..-+.+.. +..| .+.+
T Consensus 54 ~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p---~gla 122 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESP---GGLA 122 (349)
T ss_dssp CEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSCC---CEEE
T ss_pred ceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEecc------CCceEEEecCCCCceEEEeCCCCCc---cEEE
Confidence 466666666555544321 1112233332 5789987432 2568999998876555422 2221 1323
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCccee
Q 016201 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHW 249 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 249 (393)
+-..++.||+.-. ....++++++....-+.+. .+..|+ .+++- ++.||+.--.. ...++++
T Consensus 123 vd~~~g~ly~~d~--------~~~~I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~~----~~~I~r~ 187 (349)
T 3v64_C 123 VDWVHDKLYWTDS--------GTSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN----TPRIEAS 187 (349)
T ss_dssp EETTTTEEEEEET--------TTTEEEEEETTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEECSS----SCEEEEE
T ss_pred EecCCCeEEEEcC--------CCCeEEEEcCCCCceEEEEeCCCCCcc---eEEEecCcCeEEEeccCC----CCEEEEE
Confidence 3225789999852 1457889998766533332 233332 33443 67888874211 2344444
Q ss_pred EeeeeccccccCCeEEeccCCCCCCce-eEEE--ECCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-CCC-
Q 016201 250 SIAVKDGKALEKAWRTEIPIPRGGPHR-ACFV--FNDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-DEM- 324 (393)
Q Consensus 250 ~~~~~d~~~~~~~W~~~~~~p~~~~~~-~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~~~- 324 (393)
++ ....-+.+.. ...... +.+. .+++||+.-... ..|+++| ...
T Consensus 188 ~~-------dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~~----------------------~~I~~~~~dG~~ 236 (349)
T 3v64_C 188 SM-------DGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKH----------------------HVIERANLDGSH 236 (349)
T ss_dssp ET-------TSCSCEESCC--SSCSCEEEEEEETTTTEEEEEETTT----------------------TEEEEEETTSCS
T ss_pred eC-------CCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEECCC----------------------CEEEEEeCCCCc
Confidence 42 2222122211 111112 3333 378999985432 2377777 332
Q ss_pred CeEEC-CCCCCCCCCcceeEEEECCEEEEEcC
Q 016201 325 KWKVL-PPMPKPNSHIECAWVIVNNSIIITGG 355 (393)
Q Consensus 325 ~W~~~-~~~~~~r~~~~~~~~~~~~~i~v~GG 355 (393)
.-..+ ..+..| .++++.++.||+.--
T Consensus 237 ~~~~~~~~~~~P-----~giav~~~~ly~td~ 263 (349)
T 3v64_C 237 RKAVISQGLPHP-----FAITVFEDSLYWTDW 263 (349)
T ss_dssp CEEEECSSCSSE-----EEEEEETTEEEEEET
T ss_pred eEEEEeCCCCCc-----eEEEEECCEEEEecC
Confidence 22222 223322 455668999999743
No 237
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=54.38 E-value=1.2e+02 Score=27.26 Aligned_cols=66 Identities=8% Similarity=0.041 Sum_probs=37.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCC-CCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
++.+++.|+.+ ..+..||+.+.+-...-..+ .. ..-.+++. -++..++.|+.+ ..+..||..
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~ 244 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRH--GAVSSICIDEECCVLILGTTR--------GIIDIWDIR 244 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGG--CCEEEEEECTTSCEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCC--CceEEEEECCCCCEEEEEcCC--------CeEEEEEcC
Confidence 46777888765 35888999876533221111 11 11222222 256777777643 348889988
Q ss_pred CCCe
Q 016201 206 TRKW 209 (393)
Q Consensus 206 ~~~W 209 (393)
+.+.
T Consensus 245 ~~~~ 248 (437)
T 3gre_A 245 FNVL 248 (437)
T ss_dssp TTEE
T ss_pred CccE
Confidence 7554
No 238
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=53.34 E-value=94 Score=26.84 Aligned_cols=56 Identities=13% Similarity=0.092 Sum_probs=29.0
Q ss_pred eeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccC
Q 016201 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGS 237 (393)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 237 (393)
.|+++..++.+|..|-........|.. ......++. .-..|++++-++++|.+|--
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p~~-------~~~~v~~i~----~G~~hs~al~~G~v~~wG~n 206 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVPAE-------AQSGVDDVA----GGIFHSLALKDGKVIAWGDN 206 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCCGG-------GGSSEEEEE----ECSSEEEEEETTEEEEEECC
T ss_pred CEEEEEECCEEEEecCCCCCCCCCcee-------cCCCeEEEE----ecCCEEEEEECCeEEEEECC
Confidence 445555599999998533222111100 011122222 12355655678999999843
No 239
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=53.26 E-value=49 Score=28.65 Aligned_cols=67 Identities=13% Similarity=0.244 Sum_probs=40.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eC-CEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DG-RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
++++|+.++.+ ..+.++|+.+.+....-+++.. .....++. -+ +.+|+.+.. ...+..||+.
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPDK--FGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT------TEEEEEETTTTEEEEEEECSSC--CSSCEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcEEEEEecCCC--CCCceeEECCCCCEEEEEeCC--------CCcEEEEeCC
Confidence 67788887653 4689999998875443223320 01122332 33 467877631 3569999998
Q ss_pred CCCeE
Q 016201 206 TRKWD 210 (393)
Q Consensus 206 ~~~W~ 210 (393)
+.+-.
T Consensus 74 t~~~~ 78 (349)
T 1jmx_B 74 TCKNT 78 (349)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 87643
No 240
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=52.55 E-value=1.4e+02 Score=27.45 Aligned_cols=94 Identities=9% Similarity=-0.052 Sum_probs=49.5
Q ss_pred cceeeccCCCCCeEEcCCCCccccCccEEEE---CCEEEEEecCCCCCCccceEEEEECCCCceE---eCCCCCCCCCcc
Q 016201 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQI---KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV---DRFDMPKDMAHS 170 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~---~~~~~~~~~~r~ 170 (393)
..+.++|+..++.+.+.... .......+ ++.||+....... ....+..++... .+. .++.+..
T Consensus 159 ~~I~~id~~~~~v~~~~~~~---~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~g-~~~~~~~l~~~~~----- 227 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGL---SKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRES-GFKVITELTKGQN----- 227 (430)
T ss_dssp EEEEEEETTTTEEEEEECCC---SCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGGG-TSCSEEEEEECSS-----
T ss_pred CcEEEEECCCCEEEEEecCC---CCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCCC-ceeeeeeeccCCC-----
Confidence 36778888777666554311 11112222 3459998653322 123456666543 232 3333332
Q ss_pred eeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCe
Q 016201 171 HLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (393)
Q Consensus 171 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (393)
.+.+++. ++.||+.-- ....+++||+.+..-
T Consensus 228 p~giavdp~~g~lyv~d~--------~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW--------NAGQVFRYDFTTQET 260 (430)
T ss_dssp CCCEEECTTTCCEEEEET--------TTTEEEEEETTTTEE
T ss_pred ceEEEEeCCCCEEEEEEC--------CCCEEEEEECCCCcE
Confidence 2233343 678998842 145799999987654
No 241
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=52.30 E-value=82 Score=27.26 Aligned_cols=62 Identities=6% Similarity=0.060 Sum_probs=33.6
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe-CCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+++.++.|+.+ ..+.+||+.+.+-.. +..... .-.+++. .++.+++.|+.++ .+..||..
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~s~D~--------~i~vwd~~ 137 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQRFVGHKS----DVMSVDIDKKASMIISGSRDK--------TIKVWTIK 137 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCSS----CEEEEEECTTSCEEEEEETTS--------CEEEEETT
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeEEEccCCC----cEEEEEEcCCCCEEEEEeCCC--------eEEEEECC
Confidence 45667777765 358889988775322 211111 1222222 3566777776432 36677776
Q ss_pred CC
Q 016201 206 TR 207 (393)
Q Consensus 206 ~~ 207 (393)
..
T Consensus 138 ~~ 139 (319)
T 3frx_A 138 GQ 139 (319)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 242
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=52.10 E-value=2e+02 Score=29.03 Aligned_cols=200 Identities=11% Similarity=0.131 Sum_probs=96.4
Q ss_pred ceeeccCCCCCeEEcCCCCc-----cccCccEEEE---CCEEEEEecCCCCCCccceEEEEECCCCceEeCCC-CCCC--
Q 016201 98 TFADLPAPDLEWEQMPSAPV-----PRLDGAAIQI---KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD-MPKD-- 166 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~-----~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~-- 166 (393)
.+++.+-...+|+++...+. .+.-.++++. .+.||+..|....... ..+++=+=..++|+++.. ++.+
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~-~~v~~S~DgG~TW~~~~~~~~~~~~ 116 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW-AAFYVSEDRGQSFTIYESPFPMGAN 116 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC-CEEEEESSTTSEEEEEECSSCCCTT
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc-cEEEEECCCCCcceeccCCcccCcc
Confidence 46776667789999876332 1222333332 2468887664221111 234443445678998742 1110
Q ss_pred -CCc-ceeEEEEe---CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCC---CCCCceEEEE----CCEEEEE
Q 016201 167 -MAH-SHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS---PRYSPATQLW----RGRLHVM 234 (393)
Q Consensus 167 -~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~----~~~iyv~ 234 (393)
..+ ....+++. .+.+|+.. . ...+++=+=.-.+|+++..+|. .-.....+.+ .+.||+.
T Consensus 117 ~~~~~~~~~iav~p~~~~~v~~g~-~--------~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 117 DMGRNNGERLAVNPFNSNEVWMGT-R--------TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYAS 187 (789)
T ss_dssp STTTTSCCCEEEETTEEEEEEEEC-S--------SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEE
T ss_pred CCCccceeEEEEcCCCCCEEEEEe-c--------cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEE
Confidence 012 11234443 35666632 1 1235544444578999876542 1122233333 2467765
Q ss_pred ccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCC-------C---------ceeEEEE--CCEEEEEcCCCCCCC
Q 016201 235 GGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG-------P---------HRACFVF--NDRLFVVGGQEGDFM 296 (393)
Q Consensus 235 GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~-------~---------~~~~~~~--~~~iyv~GG~~~~~~ 296 (393)
.... ...|.- .....+|+.+..+|... . .+.++.. ++.||+..+......
T Consensus 188 ~~~~-------~~v~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~ 255 (789)
T 1sqj_A 188 ATAP-------QGMYVT-----HDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPW 255 (789)
T ss_dssp ESST-------TCEEEE-----SSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSS
T ss_pred EcCC-------CeEEEE-----cCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCC
Confidence 4321 111211 02566899887555432 0 0222222 788998742211000
Q ss_pred CCCCCCccccccccceecCceEEeC-CCCCeEECCCCC
Q 016201 297 AKPGSPIFKCSRRHEVVYGDVYMLD-DEMKWKVLPPMP 333 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~~yd-~~~~W~~~~~~~ 333 (393)
......+++.+ ...+|+.+...+
T Consensus 256 --------------~g~~g~l~~S~DgG~tW~~~~~~~ 279 (789)
T 1sqj_A 256 --------------GVTFGEVWRQNRTSGAWDDITPRV 279 (789)
T ss_dssp --------------CCCCCCEEEEETTTCCEEECCCCT
T ss_pred --------------CCCCceEEEEeCCCCceEECcCCC
Confidence 00012377776 567999987644
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=52.05 E-value=1e+02 Score=25.71 Aligned_cols=90 Identities=13% Similarity=0.054 Sum_probs=49.4
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
++.||+.-.. ...+.++|+.+..-..+.+... ....++++. ++.||+.-. ....+.++|+.
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~--------~~~~I~~~~~~ 109 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDS--------QLDRIEVAKMD 109 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEET--------TTTEEEEEETT
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEEC--------CCCEEEEEEcC
Confidence 5789987542 2568999988765333321111 122344443 689999852 14578899987
Q ss_pred CCCeEeCCCCCCCCCCceEEEE--CCEEEEEc
Q 016201 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMG 235 (393)
Q Consensus 206 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 235 (393)
...-+.+.+....+ -..+++. +++||+..
T Consensus 110 g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 110 GTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp SCSCEEEECSSCSS-EEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCC-ccEEEEeeCCCEEEEEE
Confidence 65433332111111 1233343 57899885
No 244
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=51.28 E-value=59 Score=27.73 Aligned_cols=87 Identities=11% Similarity=0.011 Sum_probs=49.8
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
+.||+++... ..+.+||+.+. .+.+.. +. ....+++. -++++|+... ....+.+||+.+.
T Consensus 40 ~~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~---~~~~~l~~~~dg~l~v~~~--------~~~~i~~~d~~~g 100 (296)
T 3e5z_A 40 SAVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PS---HHQNGHCLNKQGHLIACSH--------GLRRLERQREPGG 100 (296)
T ss_dssp TEEEEEEGGG------TEEEEEETTSC-EEEEES-SC---SSEEEEEECTTCCEEEEET--------TTTEEEEECSTTC
T ss_pred CEEEEEeCCC------CEEEEEECCCC-eEEEEC-CC---CCcceeeECCCCcEEEEec--------CCCeEEEEcCCCC
Confidence 3588887543 46899999988 555432 21 11233443 4678887752 1356899999888
Q ss_pred CeEeCCCCC----CCCCCceEEEECCEEEEE
Q 016201 208 KWDSIPPLP----SPRYSPATQLWRGRLHVM 234 (393)
Q Consensus 208 ~W~~~~~~p----~~r~~~~~~~~~~~iyv~ 234 (393)
+.+.+.... ..+....++--+++||+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 876553211 111122222236778886
No 245
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=51.07 E-value=2e+02 Score=28.71 Aligned_cols=82 Identities=18% Similarity=0.240 Sum_probs=49.2
Q ss_pred CCCceEeCCCCCCCCCcceeEEEEe-CCEEEEEeceeCCCCC-CCCCeeEEEeCCCCCeEeCCCCCCC----CCCceEEE
Q 016201 153 TDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCR-GPTSRTFVLDSETRKWDSIPPLPSP----RYSPATQL 226 (393)
Q Consensus 153 ~~~~W~~~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~-~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~ 226 (393)
...+|+.+..+|.. ...+.++.. ++.+|+..+....... .....+++++-...+|+++.+.|.. +..++.+.
T Consensus 230 gG~tW~~~~~~p~~--~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~ 307 (737)
T 2cn3_A 230 GGVTWKAVPGQPKG--LLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLA 307 (737)
T ss_dssp TTSCCEECTTCCCS--SEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEE
T ss_pred CCCceEECCCCCCc--ccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEE
Confidence 45789999866652 222233332 7889987643211100 1246799999999999999876643 33334333
Q ss_pred E----CCEEEEEcc
Q 016201 227 W----RGRLHVMGG 236 (393)
Q Consensus 227 ~----~~~iyv~GG 236 (393)
+ .+.||+.+.
T Consensus 308 v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 308 VDRQNPDIIMVTSM 321 (737)
T ss_dssp ECTTCTTCEEEEEE
T ss_pred EcCCCCCEEEEEec
Confidence 3 357887754
No 246
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=50.25 E-value=1.8e+02 Score=28.05 Aligned_cols=56 Identities=16% Similarity=0.260 Sum_probs=31.2
Q ss_pred eEEEECCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCC------CceeEEEECCEEEEEc
Q 016201 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG------PHRACFVFNDRLFVVG 289 (393)
Q Consensus 223 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~------~~~~~~~~~~~iyv~G 289 (393)
+-++.+++||+..... .+.++| .......|+.-...+... ...+.++.+++||+..
T Consensus 63 ~P~v~~g~vyv~~~~~------~v~AlD-----~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t 124 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS------RLFALD-----AKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT 124 (582)
T ss_dssp CCEEETTEEEEEETTT------EEEEEE-----SSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE
T ss_pred ccEEECCEEEEEcCCC------CEEEEE-----CCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe
Confidence 4467899999986531 133333 223455688754433211 1124456789988854
No 247
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=49.93 E-value=1e+02 Score=25.66 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=49.3
Q ss_pred ECCEEEEEecCCCCCCccceEEEEECCC----CceEe--------CCCCCCC--CCcceeEEEE-eCCEEEEEeceeCCC
Q 016201 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTD----NKWVD--------RFDMPKD--MAHSHLGVVS-DGRYIYIVSGQYGPQ 191 (393)
Q Consensus 127 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~----~~W~~--------~~~~~~~--~~r~~~~~~~-~~~~iyv~GG~~~~~ 191 (393)
.++++|++=| +..|+||..+ +.-.. .+.+|.. ...-.++... .++++|+|-|
T Consensus 69 ~~g~~~fFkg--------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG----- 135 (225)
T 3oyo_A 69 EASEAYVFSG--------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG----- 135 (225)
T ss_dssp STTEEEEEET--------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-----
T ss_pred CCCeEEEEcC--------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-----
Confidence 4789999977 4578887532 22211 1122220 0012222222 4789999975
Q ss_pred CCCCCCeeEEEeCCCCCeEeC----C-CCC------CCCCCceEEE--ECCEEEEEccC
Q 016201 192 CRGPTSRTFVLDSETRKWDSI----P-PLP------SPRYSPATQL--WRGRLHVMGGS 237 (393)
Q Consensus 192 ~~~~~~~v~~yd~~~~~W~~~----~-~~p------~~r~~~~~~~--~~~~iyv~GG~ 237 (393)
+..|+||..+++-..- . ..| .+..--++.. .++++|++-|.
T Consensus 136 -----~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~ 189 (225)
T 3oyo_A 136 -----NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ 189 (225)
T ss_dssp -----TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT
T ss_pred -----CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC
Confidence 4588898766554321 1 111 1222223333 37899999764
No 248
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=48.73 E-value=48 Score=28.49 Aligned_cols=107 Identities=9% Similarity=0.105 Sum_probs=50.0
Q ss_pred ceeeccCCCCCeEEcCCCCccc-cCccEEEE-CC-EEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCC----Ccc
Q 016201 98 TFADLPAPDLEWEQMPSAPVPR-LDGAAIQI-KN-LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM----AHS 170 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r-~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~----~r~ 170 (393)
.+..+|..+.+-...-.++... .-..++.. ++ .+|+.+..+ ..+.++|+.+.+-...-+.+.+. .-.
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS------ESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT------TEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC------CeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 6777777665432221222210 11223222 34 678876532 46899999887644321221100 011
Q ss_pred eeEEEEeCCEEEEEeceeCCCCCC---CCCeeEEEeCCCCCeE
Q 016201 171 HLGVVSDGRYIYIVSGQYGPQCRG---PTSRTFVLDSETRKWD 210 (393)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~---~~~~v~~yd~~~~~W~ 210 (393)
..+....++.+|+.....+..... ....+..||+.+.+..
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 212211244777774221100000 1467999999876643
No 249
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=48.05 E-value=1.1e+02 Score=25.57 Aligned_cols=65 Identities=18% Similarity=0.266 Sum_probs=36.7
Q ss_pred EEEECCEEEEEecCCCCCCccceEEEEECCCC-ceE-----eCC---CCCCC--CCcceeEEEE-eCCEEEEEeceeCCC
Q 016201 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWV-----DRF---DMPKD--MAHSHLGVVS-DGRYIYIVSGQYGPQ 191 (393)
Q Consensus 124 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~-----~~~---~~~~~--~~r~~~~~~~-~~~~iyv~GG~~~~~ 191 (393)
+...++++|+|=| +.+|+|+..++ +=. .+. .+|.. ..+-..++.. .++++|+|-|
T Consensus 68 A~~~~~~~yfFkG--------~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG----- 134 (219)
T 1hxn_A 68 AFSWEDKLYLIQD--------TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG----- 134 (219)
T ss_dssp EEEETTEEEEEET--------TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-----
T ss_pred EEEECCcEEEecC--------CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-----
Confidence 3445899999976 46899986532 110 111 12221 1122333322 3689999976
Q ss_pred CCCCCCeeEEEeCCC
Q 016201 192 CRGPTSRTFVLDSET 206 (393)
Q Consensus 192 ~~~~~~~v~~yd~~~ 206 (393)
+..|+||..+
T Consensus 135 -----~~ywr~d~~~ 144 (219)
T 1hxn_A 135 -----RRLWWLDLKS 144 (219)
T ss_dssp -----TEEEEEEGGG
T ss_pred -----CEEEEEeCCC
Confidence 4578898654
No 250
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=47.77 E-value=1.4e+02 Score=25.93 Aligned_cols=110 Identities=9% Similarity=0.130 Sum_probs=61.0
Q ss_pred CEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC
Q 016201 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (393)
Q Consensus 129 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 208 (393)
+.|||....+ ..+.+||+.+.+....-..+.. .....+++...+.+|+..|...... .....+..+|+.+.+
T Consensus 208 g~l~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~pg~~~~~~g~~~v~~-~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 208 DQLCVADREN------GRIQCFKTDTKEFVREIKHASF-GRNVFAISYIPGFLFAVNGKPYFGD-QEPVQGFVMNFSSGE 279 (329)
T ss_dssp TEEEEEETTT------TEEEEEETTTCCEEEEECCTTT-TTCEEEEEEETTEEEEEECCCCTTC-SCCCCEEEEETTTCC
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEEecccc-CCCcceeeecCCEEEEeCCCEEecc-CCCcEEEEEEcCCCe
Confidence 7999986532 4699999986665443222211 1223344555588888877533221 224578999988877
Q ss_pred eEeC-CCCCCCCCCc-eEEEE-CCEEEEEccCCCCCCCCCcceeEe
Q 016201 209 WDSI-PPLPSPRYSP-ATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (393)
Q Consensus 209 W~~~-~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~ 251 (393)
.... .+.+...... .+++. ++.|||.... .+.+..|++
T Consensus 280 ~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~-----~~~I~~~~~ 320 (329)
T 3fvz_A 280 IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAH-----TNTVWKFTL 320 (329)
T ss_dssp EEEEECCSSSCCSSEEEEEECTTSEEEEEESS-----SCCEEEEEE
T ss_pred EEEEEcCCCCccCCeeEEEECCCCCEEEEECC-----CCEEEEEeC
Confidence 5443 2111111122 22322 5689988643 346666664
No 251
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=47.33 E-value=66 Score=27.43 Aligned_cols=98 Identities=10% Similarity=0.150 Sum_probs=50.6
Q ss_pred CCEEEEEecCCCC-CCccceEEEEECCCCceEeCCCCCC--CCCcceeEEEE-eC-CEEEEEeceeCCCCCCCCCeeEEE
Q 016201 128 KNLFYVFAGYGSL-DYVHSHVDVYNFTDNKWVDRFDMPK--DMAHSHLGVVS-DG-RYIYIVSGQYGPQCRGPTSRTFVL 202 (393)
Q Consensus 128 ~~~iyv~GG~~~~-~~~~~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~y 202 (393)
++.||+....... ......+.+||+.+.++..+.. +. .....-.+++. -+ +++|+... ...+.+|
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~ 97 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVV 97 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEE
Confidence 5678887211000 0012458899998888876532 10 00011223333 35 78998863 1358899
Q ss_pred eCCCCCeEeC-CCCCC--CCC-CceEEE-ECCEEEEEcc
Q 016201 203 DSETRKWDSI-PPLPS--PRY-SPATQL-WRGRLHVMGG 236 (393)
Q Consensus 203 d~~~~~W~~~-~~~p~--~r~-~~~~~~-~~~~iyv~GG 236 (393)
|+. .+...+ ..... +.. -..++. -++++|+...
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 998 776665 32211 111 122222 2567887653
No 252
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=46.45 E-value=1.8e+02 Score=26.92 Aligned_cols=127 Identities=13% Similarity=0.242 Sum_probs=65.8
Q ss_pred CCceEe--CCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCC-----C-CeEeCCC-CCCCCCCceE
Q 016201 154 DNKWVD--RFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET-----R-KWDSIPP-LPSPRYSPAT 224 (393)
Q Consensus 154 ~~~W~~--~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~-----~-~W~~~~~-~p~~r~~~~~ 224 (393)
.+.|+. ++..| ..-.-|+.+.+++.-|++|=.++.- .|..--..|-+.. . .-+.++. ....-...++
T Consensus 269 ~spW~~t~L~~i~--~vTe~HSFa~i~~~~fa~GyHnGDv--~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCv 344 (670)
T 3ju4_A 269 KSPWRKTDLGLIP--SVTEVHSFATIDNNGFAMGYHQGDV--APREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCI 344 (670)
T ss_dssp TSCCEEEECCSCT--TCSEEEEEEECSSSCEEEEEEECSS--SSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEE
T ss_pred cCCceeccccccc--ceeeeeeeeEecCCceEEEeccCCC--CcceeeEEEecccccCCcceeeeechhhhccccccchh
Confidence 345654 23333 2356788889998888998655543 1222222332221 1 1122222 1111122334
Q ss_pred EEECCEEEEEc-cCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCC--CceeEEEECCEEEEEcCCC
Q 016201 225 QLWRGRLHVMG-GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG--PHRACFVFNDRLFVVGGQE 292 (393)
Q Consensus 225 ~~~~~~iyv~G-G~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~--~~~~~~~~~~~iyv~GG~~ 292 (393)
-.+++.||+.- |.......+...+-+ .....|+.+. .|... ...-.+..++.||+||...
T Consensus 345 kyYdgvLyLtTRgt~~~~~GS~L~rs~-------d~Gq~w~slr-fp~nvHhtnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 345 KYYDGVLYLITRGTRGDRLGSSLHRSR-------DIGQTWESLR-FPHNVHHTTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp EEETTEEEEEEEESCTTSCCCEEEEES-------STTSSCEEEE-CTTCCCSSCCCEEEETTEEEEEEECS
T ss_pred hhhCCEEEEEecCcCCCCCcceeeeec-------ccCCchhhee-ccccccccCCCcceeCCEEEEEeccc
Confidence 46799999985 443333333333222 2677898874 22222 2223466799999999754
No 253
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=44.93 E-value=1.8e+02 Score=26.44 Aligned_cols=122 Identities=12% Similarity=0.022 Sum_probs=58.4
Q ss_pred cceeeccCCCCCeEEcCCC-CccccCccEEEECCEEEEEecCCCCCCccceEEEEECCCCc-eEeCCCCCC-CCCcceeE
Q 016201 97 ATFADLPAPDLEWEQMPSA-PVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPK-DMAHSHLG 173 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~-~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~-~~~r~~~~ 173 (393)
..+.++|+.+..-..+... ..++ .+...-++.||+...... ..++++|+.+.. ...+..++. ...+.. +
T Consensus 152 ~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~-----~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~ 223 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGT-----HTVYVYMKASGWAPTRIGQLGSTFSGKIG-A 223 (409)
T ss_dssp TEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTT-----CEEEEEEGGGTTCEEEEEECCTTSCSCCC-B
T ss_pred CcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCC-----ceEEEEEcCCCceeEEeeeccchhcCCcE-E
Confidence 3566777665543333221 1111 111111345666543221 168889987543 223311111 111222 2
Q ss_pred EEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC---CCCCCCCC-c-eEEEE--CCEEEEEc
Q 016201 174 VVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP---PLPSPRYS-P-ATQLW--RGRLHVMG 235 (393)
Q Consensus 174 ~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~-~-~~~~~--~~~iyv~G 235 (393)
+++. ++.||+... ...+++||+.+..-..+. ........ . .+++. ++.||+..
T Consensus 224 iav~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 224 VALDETEEWLYFVDS---------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEECTTSSEEEEECT---------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EEEeCCCCeEEEEEC---------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 3333 689999421 346999999887755441 11111222 1 45554 57899884
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=44.50 E-value=1.8e+02 Score=26.23 Aligned_cols=160 Identities=14% Similarity=0.002 Sum_probs=82.2
Q ss_pred hcceeeccCCCCCeEEcCC--CCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcce
Q 016201 96 SATFADLPAPDLEWEQMPS--APVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSH 171 (393)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~--~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~ 171 (393)
+..++++++.....+.+.. +..| .++++- ++.||+.-.. ...++++++....-+.+..-.. ..-
T Consensus 137 ~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l---~~P 204 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSL---EKP 204 (386)
T ss_dssp TTEEEEEETTSCCEEEEECSSCSCC---CCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSC---SCE
T ss_pred CCcEEEEecCCCCcEEEEeCCCCCc---cEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCC---CCC
Confidence 3467778777665544322 2222 233433 6899997542 2468888887654333322111 112
Q ss_pred eEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCC
Q 016201 172 LGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPG 245 (393)
Q Consensus 172 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 245 (393)
.++++. ++.||+.-- . ....++++++....-+.+. .+..| .++++- +++||+.-.. ...
T Consensus 205 ~giavdp~~g~ly~td~---~----~~~~I~r~~~dG~~~~~~~~~~~~~P---nGlavd~~~~~lY~aD~~-----~~~ 269 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDW---G----NTPRIEASSMDGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVDAK-----HHV 269 (386)
T ss_dssp EEEEEETTTTEEEEEEC---S----SSCEEEEEETTSCSCEEEECSSCSCE---EEEEEEGGGTEEEEEETT-----TTE
T ss_pred cEEEEEcCCCeEEEecc---C----CCCEEEEEeCCCCCcEEEEECCCCCe---eeEEEeCCCCEEEEEECC-----CCE
Confidence 244443 789998842 1 1367999998765443332 12111 234443 6889998422 233
Q ss_pred cceeEeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcC
Q 016201 246 LEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290 (393)
Q Consensus 246 ~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG 290 (393)
++++++ + .++.-..+. .. ...-.++++.++.||+.--
T Consensus 270 I~~~d~-----d-G~~~~~~~~-~~-~~~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 270 IERANL-----D-GSHRKAVIS-QG-LPHPFAITVFEDSLYWTDW 306 (386)
T ss_dssp EEEECT-----T-SCSCEEEEC-SS-CSSEEEEEEETTEEEEEET
T ss_pred EEEEeC-----C-CCeeEEEEE-CC-CCCceEEEEECCEEEEeeC
Confidence 444432 2 122222221 11 1123466668999999863
No 255
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=44.45 E-value=1.4e+02 Score=24.86 Aligned_cols=58 Identities=19% Similarity=0.315 Sum_probs=33.2
Q ss_pred ECCEEEEEecCCCCCCccceEEEEECCCCce--EeCC----CCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeE
Q 016201 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW--VDRF----DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (393)
Q Consensus 127 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--~~~~----~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 200 (393)
.++++|+|=| +..|+++...... ..+. .||. .-.++. ..++++|+|-| +.+|
T Consensus 27 ~~g~~yfFkg--------~~~Wr~~~~~~~~~p~~Is~~wpgLP~---~IDAA~-~~~~~~yfFkG----------~~yw 84 (219)
T 1hxn_A 27 NHGATYVFSG--------SHYWRLDTNRDGWHSWPIAHQWPQGPS---TVDAAF-SWEDKLYLIQD----------TKVY 84 (219)
T ss_dssp TTSCEEEEET--------TEEEESSSSSCTTCCEEGGGTCTTSCS---SCSEEE-EETTEEEEEET----------TEEE
T ss_pred CCCcEEEEeC--------CEEEEEcCCCCCCCceEhhhhccCCCC---CccEEE-EECCcEEEecC----------CEEE
Confidence 4788999876 3466665443221 1121 2333 223233 34899999965 4588
Q ss_pred EEeCCC
Q 016201 201 VLDSET 206 (393)
Q Consensus 201 ~yd~~~ 206 (393)
+|+..+
T Consensus 85 ~~~~~~ 90 (219)
T 1hxn_A 85 VFLTKG 90 (219)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 888653
No 256
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=43.35 E-value=1.1e+02 Score=26.78 Aligned_cols=67 Identities=10% Similarity=0.027 Sum_probs=42.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
++.+|+++-.. ..+++||+.+++.+.+. ++. .....+..-++++++.. ...+++||+.+.
T Consensus 60 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~v~~i~~~~dg~l~v~~----------~~gl~~~d~~~g 119 (326)
T 2ghs_A 60 SGTAWWFNILE------RELHELHLASGRKTVHA-LPF---MGSALAKISDSKQLIAS----------DDGLFLRDTATG 119 (326)
T ss_dssp TTEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS---CEEEEEEEETTEEEEEE----------TTEEEEEETTTC
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEE-CCC---cceEEEEeCCCeEEEEE----------CCCEEEEECCCC
Confidence 36788876432 46899999988765442 222 22222234578888764 124899999988
Q ss_pred CeEeCCC
Q 016201 208 KWDSIPP 214 (393)
Q Consensus 208 ~W~~~~~ 214 (393)
+.+.+..
T Consensus 120 ~~~~~~~ 126 (326)
T 2ghs_A 120 VLTLHAE 126 (326)
T ss_dssp CEEEEEC
T ss_pred cEEEEee
Confidence 8776643
No 257
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=41.48 E-value=93 Score=26.96 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=53.0
Q ss_pred cceeeccCCCCCe-EEcCCCCccccCccEEEECCEEEEEecCCCCCC--c-cceEEEEECCCCceEeCCCCCCCCCccee
Q 016201 97 ATFADLPAPDLEW-EQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDY--V-HSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (393)
Q Consensus 97 ~~~~~~~~~~~~W-~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~--~-~~~~~~yd~~~~~W~~~~~~~~~~~r~~~ 172 (393)
..++.+|..+.+. +.+.. + ....++...+.+++.+..+.... . ...++.+| +.+++.+..- . . ..
T Consensus 152 ~~l~~~d~~~~~~~~~l~~---~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~---~-~~ 220 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK---P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V---S-FY 220 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE---E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E---S-EE
T ss_pred ceEEEEECCCCeEEeeecC---C-CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-c---c-ee
Confidence 3688888877765 55543 2 22333333333555554432211 1 35788888 6677665432 1 1 12
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC
Q 016201 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (393)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 214 (393)
.. .-+++.+++.+............++.+| +.++..+.+
T Consensus 221 ~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 221 AV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp EE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST
T ss_pred eE-CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc
Confidence 22 4455544444332211112246799999 666666653
No 258
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=41.25 E-value=2.1e+02 Score=26.01 Aligned_cols=199 Identities=11% Similarity=0.021 Sum_probs=96.8
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCC----ceEeCCCCCCCCCcce
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDN----KWVDRFDMPKDMAHSH 171 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~~~~~~~~r~~ 171 (393)
.+...+.....++.+.+ ..+.-.+++.. ++.||+.--. ...+.++++... ....+..-.. ...
T Consensus 93 ~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~------~~~I~~~~~~g~~~~~~~~~~~~~~~---~~p 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDI---QAP 161 (400)
T ss_dssp EEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEEC------CCCEEEECSSC---SCE
T ss_pred eeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC------CCeEEEEEcccCCCCCcceEEEeCCC---CCc
Confidence 55666666665554422 11222333333 5789997432 245888888752 2222211111 122
Q ss_pred eEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCC
Q 016201 172 LGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPG 245 (393)
Q Consensus 172 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 245 (393)
.++++ .++.||+.-. ....++++++....-+.+. .+..|+ .+++. ++.||+.--.. ...
T Consensus 162 ~glavD~~~~~lY~~d~--------~~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~----~~~ 226 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT----PAK 226 (400)
T ss_dssp EEEEEETTTTEEEEEET--------TTTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSS----SCC
T ss_pred ccEEEEecCCceEEEEC--------CCCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCC----CCE
Confidence 34444 4899999842 1456889998876654442 233332 33442 67898874211 234
Q ss_pred cceeEeeeeccccccCCeEEeccCCCCCCceeEEEE--CCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEeC-C
Q 016201 246 LEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF--NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYMLD-D 322 (393)
Q Consensus 246 ~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd-~ 322 (393)
+++.++ ....=+.+..- .-....+++.- +++||+.-... ..|+++| .
T Consensus 227 I~~~~~-------dG~~~~~~~~~-~l~~P~glavd~~~~~lY~aD~~~----------------------~~I~~~d~d 276 (400)
T 3p5b_L 227 IKKGGL-------NGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKL----------------------HSISSIDVN 276 (400)
T ss_dssp EEEEET-------TSCSCEEEECS-SCSCEEEEEEETTTTEEEEEETTT----------------------TEEEEEETT
T ss_pred EEEEeC-------CCCccEEEEEC-CCCceEEEEEEeCCCEEEEEECCC----------------------CEEEEEeCC
Confidence 555443 11111111110 00111233333 68899985332 2378877 3
Q ss_pred C-CCeEECCCCCCCCCCcceeEEEECCEEEEEc
Q 016201 323 E-MKWKVLPPMPKPNSHIECAWVIVNNSIIITG 354 (393)
Q Consensus 323 ~-~~W~~~~~~~~~r~~~~~~~~~~~~~i~v~G 354 (393)
. +....+.. +. ...+..++++.++.||+.-
T Consensus 277 G~~~~~~~~~-~~-~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 277 GGNRKTILED-EK-RLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp SCCCEEEEEC-SS-TTSSEEEEEEETTEEEEEE
T ss_pred CCccEEEEeC-CC-CCCCCEEEEEeCCEEEEec
Confidence 3 33333321 11 1122356677899999984
No 259
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=41.07 E-value=10 Score=34.57 Aligned_cols=51 Identities=8% Similarity=0.100 Sum_probs=25.7
Q ss_pred EEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCC--eEeCCCCCCCCCCceEEEECCEEEEEccC
Q 016201 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPRYSPATQLWRGRLHVMGGS 237 (393)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 237 (393)
.++.++.||+.+. ...++++|..+.+ |+.... + ...+.++.++++|+.++.
T Consensus 5 P~v~~~~v~~gs~---------dg~v~a~d~~tG~~~W~~~~~---~-~~s~p~~~~g~~~v~~s~ 57 (369)
T 2hz6_A 5 VTLPETLLFVSTL---------DGSLHAVSKRTGSIKWTLKED---P-VLQVPTHVEEPAFLPDPN 57 (369)
T ss_dssp ---CTTEEEEEET---------TSEEEEEETTTCCEEEEEECC---C-SCCCC-----CCEEECTT
T ss_pred CeeeCCEEEEEcC---------CCEEEEEECCCCCEEEEecCC---C-ceecceEcCCCEEEEeCC
Confidence 3456777777642 2458889987765 765431 1 112334456778877644
No 260
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=40.88 E-value=1.9e+02 Score=28.24 Aligned_cols=76 Identities=4% Similarity=-0.183 Sum_probs=38.0
Q ss_pred CCEEEEEecCCCCC---CccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeC
Q 016201 128 KNLFYVFAGYGSLD---YVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (393)
Q Consensus 128 ~~~iyv~GG~~~~~---~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 204 (393)
+++.++++..+... .....++++|+.+.+-+.+................-+++..+++. ..+++.+|.
T Consensus 71 Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~---------~~~i~~~~~ 141 (723)
T 1xfd_A 71 DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF---------ENNIYYCAH 141 (723)
T ss_dssp TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE---------TTEEEEESS
T ss_pred CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE---------CCeEEEEEC
Confidence 56655655443221 123679999999887665554322100111112223444444432 135777777
Q ss_pred CCCCeEeC
Q 016201 205 ETRKWDSI 212 (393)
Q Consensus 205 ~~~~W~~~ 212 (393)
.+.+-..+
T Consensus 142 ~~g~~~~~ 149 (723)
T 1xfd_A 142 VGKQAIRV 149 (723)
T ss_dssp SSSCCEEE
T ss_pred CCCceEEE
Confidence 76655444
No 261
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=40.82 E-value=1.6e+02 Score=24.54 Aligned_cols=163 Identities=9% Similarity=0.014 Sum_probs=79.7
Q ss_pred hcceeeccCCCCCeEEcCC--CCccccCccEEEE--CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcce
Q 016201 96 SATFADLPAPDLEWEQMPS--APVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSH 171 (393)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~--~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~ 171 (393)
+..+.++++....-..+.. +..| +.+++. ++.||+.-.. ...+.++++....-+.+.+... .+ .
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~~~p---~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~~--~~-P 124 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDLGSP---EGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQRRVLFDTGL--VN-P 124 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTCCCE---EEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSC--SS-E
T ss_pred CCEEEEEecCCCCcEEEEECCCCCc---cEEEEEecCCeEEEEECC------CCEEEEEEcCCCCEEEEEECCC--CC-c
Confidence 3467888876653222211 1222 234443 5789997542 2568899987654333322111 11 2
Q ss_pred eEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcc
Q 016201 172 LGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLE 247 (393)
Q Consensus 172 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 247 (393)
..+++. ++.||+.... .....++++++....-+.+..... ..-..+++- +++||+.--. .+.+.
T Consensus 125 ~~i~vd~~~g~lyv~~~~------~~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~ 192 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWN------RDNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRAE 192 (267)
T ss_dssp EEEEEETTTTEEEEEECC------SSSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT-----TTEEE
T ss_pred cEEEEeeCCCEEEEEECC------CCCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEEE
Confidence 234443 6899998521 113568888887544333321111 111233333 4689988432 23444
Q ss_pred eeEeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCC
Q 016201 248 HWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQ 291 (393)
Q Consensus 248 ~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 291 (393)
++++ ....-..+.. ....-.+++..++.||+....
T Consensus 193 ~~~~-------~g~~~~~~~~--~~~~P~gi~~d~~~lyva~~~ 227 (267)
T 1npe_A 193 CLNP-------AQPGRRKVLE--GLQYPFAVTSYGKNLYYTDWK 227 (267)
T ss_dssp EEET-------TEEEEEEEEE--CCCSEEEEEEETTEEEEEETT
T ss_pred EEec-------CCCceEEEec--CCCCceEEEEeCCEEEEEECC
Confidence 4442 2211111111 111223555668899997543
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=40.10 E-value=3.1e+02 Score=27.75 Aligned_cols=134 Identities=13% Similarity=0.031 Sum_probs=72.9
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
+++||+.-.. ...|+++++....-+.+..-.. ..-.++++ .++.||+.-- . ....++++++.
T Consensus 482 ~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~l---~~P~gIaVDp~~g~LYwtD~---g----~~~~I~~~~~d 545 (791)
T 3m0c_C 482 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENG---SKPRAIVVDPVHGFMYWTDW---G----TPAKIKKGGLN 545 (791)
T ss_dssp TTEEEEEETT------TTEEEEEETTSSSEEEEEECTT---CCEEEEEEETTTTEEEEEEC---S----SSCEEEEEETT
T ss_pred CCcEEEEecC------CCeEEEEeCCCCeEEEEEeCCC---CCcceEEEecCCCCEEEecC---C----CCCeEEEEecC
Confidence 6799997432 3579999998776555432111 11224555 4689999841 0 12568889887
Q ss_pred CCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE
Q 016201 206 TRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF 281 (393)
Q Consensus 206 ~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~ 281 (393)
...-+.+. .+..|. ++++- +++||+.-.. ...++.+++ + .......+.....-...+++++.
T Consensus 546 G~~~~~lv~~~l~~P~---GLavD~~~~~LYwaD~~-----~~~I~~~d~-----d-G~~~~~v~~~~~~l~~P~glav~ 611 (791)
T 3m0c_C 546 GVDIYSLVTENIQWPN---GITLDLLSGRLYWVDSK-----LHSISSIDV-----N-GGNRKTILEDEKRLAHPFSLAVF 611 (791)
T ss_dssp SCCEEEEECSSCSCEE---EEEEETTTTEEEEEETT-----TTEEEEEET-----T-SCSCEEEEECTTTTSSEEEEEEE
T ss_pred CCceEEEEeCCCCCce---EEEEecCCCeEEEEeCC-----CCcEEEEec-----C-CCceEEEecCCCccCCCCEEEEe
Confidence 65544332 222221 23333 6899998422 344555543 1 23333333221112233467778
Q ss_pred CCEEEEEcCC
Q 016201 282 NDRLFVVGGQ 291 (393)
Q Consensus 282 ~~~iyv~GG~ 291 (393)
+++||+.--.
T Consensus 612 ~~~lYwtD~~ 621 (791)
T 3m0c_C 612 EDKVFWTDII 621 (791)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEEECC
Confidence 9999998643
No 263
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=38.42 E-value=1.3e+02 Score=24.98 Aligned_cols=60 Identities=15% Similarity=0.171 Sum_probs=37.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe----CC-CCCCC-----CCcceeEEEE-eCCEEEEEeceeCCCCCCCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD----RF-DMPKD-----MAHSHLGVVS-DGRYIYIVSGQYGPQCRGPT 196 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~----~~-~~~~~-----~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 196 (393)
++++|++-| +..|+||..+++... +. ..|.- ......+... .++++|+|-|
T Consensus 127 ~gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---------- 188 (225)
T 3oyo_A 127 GKEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---------- 188 (225)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET----------
T ss_pred CCcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC----------
Confidence 689999987 468999977766543 11 11110 0122333332 4789999975
Q ss_pred CeeEEEeCC
Q 016201 197 SRTFVLDSE 205 (393)
Q Consensus 197 ~~v~~yd~~ 205 (393)
+..|+||..
T Consensus 189 ~~ywr~d~~ 197 (225)
T 3oyo_A 189 QNYVRIDFT 197 (225)
T ss_dssp TEEEEEECC
T ss_pred CEEEEEeCC
Confidence 458899987
No 264
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=37.59 E-value=1.7e+02 Score=23.98 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=48.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCce---EeCCCCCCC--CCcceeEEEEe-CCEEEEEeceeCCCCCCCCCeeEE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW---VDRFDMPKD--MAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFV 201 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W---~~~~~~~~~--~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~ 201 (393)
++++|+|=| +.+|+|+..+-.- +.|..+..| ...-.+++... ++++|+|-| +..|+
T Consensus 79 ~~~iyfFkG--------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG----------~~ywr 140 (207)
T 1pex_A 79 HDLIFIFRG--------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG----------NQVWR 140 (207)
T ss_dssp TTEEEEEET--------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET----------TEEEE
T ss_pred CCcEEEEcc--------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC----------CEEEE
Confidence 589999977 4577886432111 123332222 11233333322 489999975 45889
Q ss_pred EeCCCCCeEe---------CCCCCCCCCCceEEEECCEEEEEccC
Q 016201 202 LDSETRKWDS---------IPPLPSPRYSPATQLWRGRLHVMGGS 237 (393)
Q Consensus 202 yd~~~~~W~~---------~~~~p~~r~~~~~~~~~~~iyv~GG~ 237 (393)
||..+++=.. -+.+| ..--++...++++|.|-|.
T Consensus 141 ~d~~~~~~d~gyPr~i~~~~~Gip--~~iDaAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 141 YDDTNHIMDKDYPRLIEEDFPGIG--DKVDAVYEKNGYIYFFNGP 183 (207)
T ss_dssp EETTTTEECSSCCCBHHHHSTTSC--SCCSEEEEETTEEEEEETT
T ss_pred EeCcCccccCCCCccHHHcCCCCC--CCccEEEEcCCcEEEEECC
Confidence 9987643110 01222 1223444569999999764
No 265
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=37.00 E-value=84 Score=27.17 Aligned_cols=17 Identities=0% Similarity=-0.269 Sum_probs=11.6
Q ss_pred CccEEEECCEEEEEecC
Q 016201 121 DGAAIQIKNLFYVFAGY 137 (393)
Q Consensus 121 ~~~~~~~~~~iyv~GG~ 137 (393)
.|+++.-+++||..|-.
T Consensus 34 ~h~~~l~~G~v~~wG~n 50 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGAN 50 (282)
T ss_dssp SEEEEEETTEEEEEECC
T ss_pred CeEEEEECCEEEEEeCC
Confidence 35554458899999854
No 266
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=36.96 E-value=3.3e+02 Score=27.23 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=61.7
Q ss_pred ceeeccCCCCCeEEcCCCCcccc---CccEEEE----CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCC----
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRL---DGAAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD---- 166 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~---~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~---- 166 (393)
.+++-.-...+|+++..++.... ....+.+ .+.||+.....+ .+++=+=...+|+.+...+..
T Consensus 156 ~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g------~v~~S~DgG~tW~~~~~~~~~~~~~ 229 (763)
T 3a0f_A 156 GLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG------GLWVTWDGGANWSQVGGQPTQWSDW 229 (763)
T ss_dssp CEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT------CEEEESSSSSSCEECTTCCCSCCHH
T ss_pred cEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC------eEEEECCCCCCccccCCCccccccc
Confidence 45555555679999987765322 2222233 246777654221 233323345689998755521
Q ss_pred --------------CCcceeEEEEe-CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCC
Q 016201 167 --------------MAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS 217 (393)
Q Consensus 167 --------------~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 217 (393)
.....+.++.. ++.+|+...............+++.+-...+|+++.+++.
T Consensus 230 ~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 230 TKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp HHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSS
T ss_pred cccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCC
Confidence 11222333332 6788888531110000124578899888999999886553
No 267
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=36.47 E-value=3.1e+02 Score=26.77 Aligned_cols=79 Identities=10% Similarity=-0.005 Sum_probs=42.8
Q ss_pred ECCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCC---CCC-cceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEE
Q 016201 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK---DMA-HSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVL 202 (393)
Q Consensus 127 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 202 (393)
-++++|.+--..+.. ...+++.+.....|+.+-+... .-. ........-+++..++.-..... ....++.+
T Consensus 78 dG~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~---~~~~i~v~ 152 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKE--KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA---DEAVLHVI 152 (695)
T ss_dssp ETTEEEEEEECTTCS--SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC---SCCEEEEE
T ss_pred ECCEEEEEEEcCCCe--EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC---ceEEEEEE
Confidence 356666654322222 2568888888888887744221 100 11111222366666655432221 14679999
Q ss_pred eCCCCCeE
Q 016201 203 DSETRKWD 210 (393)
Q Consensus 203 d~~~~~W~ 210 (393)
|..+.+..
T Consensus 153 dl~tg~~~ 160 (695)
T 2bkl_A 153 DVDSGEWS 160 (695)
T ss_dssp ETTTCCBC
T ss_pred ECCCCCCc
Confidence 99998764
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=35.30 E-value=2.7e+02 Score=25.61 Aligned_cols=94 Identities=7% Similarity=-0.014 Sum_probs=47.1
Q ss_pred cceeeccCCCCCeEEcCC-CCccccCccEEE-ECCEEEEEecCCCCCCccceEEEEECCCCceE---eCCCCCCCCCcce
Q 016201 97 ATFADLPAPDLEWEQMPS-APVPRLDGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV---DRFDMPKDMAHSH 171 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~-~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~---~~~~~~~~~~r~~ 171 (393)
..+.++|+.+.+.+.+.. +..| ..++. -++.|||.--..... ...+..++... .+. .++.+..|
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P---~giavd~dG~lyVad~~~~~~--~~gv~~~~~~~-~~~~~~~~~~~~~P----- 230 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQC---ADVNFTLNGDMVVVDDQSSDT--NTGIYLFTRAS-GFTERLSLCNARGA----- 230 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCE---EEEEECTTCCEEEEECCSCTT--SEEEEEECGGG-TTCCEEEEEECSSB-----
T ss_pred CCEEEEECCCCEEEEeecCCCCc---cEEEECCCCCEEEEcCCCCcc--cceEEEEECCC-CeeccccccccCCC-----
Confidence 367788877766655543 1111 12222 245588875322111 13355555432 222 22322222
Q ss_pred eEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCe
Q 016201 172 LGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (393)
Q Consensus 172 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W 209 (393)
..+++. ++.||+.-. ....+++||+.+.+-
T Consensus 231 ~giavd~~~G~lyv~d~--------~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRY--------HHAMISSYDPATGTL 262 (433)
T ss_dssp CCCEECTTTCCEEECBT--------TCSEEEEECTTTCCE
T ss_pred CEEEEeCCCCeEEEEEC--------CCCEEEEEECCCCeE
Confidence 123332 678888742 145699999986654
No 269
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=35.01 E-value=1.8e+02 Score=23.54 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=37.2
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe-----CCCC-CCCCCcceeEEEEeCC-EEEEEeceeCCCCCCCCCeeE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RFDM-PKDMAHSHLGVVSDGR-YIYIVSGQYGPQCRGPTSRTF 200 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~~~~-~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~ 200 (393)
++++|++-| +..++||..+++-.. +... ..| .....+....++ ++|.+-| +..+
T Consensus 109 ~g~~yfFkG--------~~yw~yd~~~~~v~~gyPk~i~~~~gip-~~idaAf~~~~~~~~YfFkg----------~~y~ 169 (196)
T 3c7x_A 109 NGKTYFFRG--------NKYYRFNEELRAVDSEYPKNIKVWEGIP-ESPRGSFMGSDEVFTYFYKG----------NKYW 169 (196)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECTTCSEEGGGSBTCC-SSCSEEEECTTSSEEEEEET----------TEEE
T ss_pred CCEEEEEEC--------CEEEEEeCCcccccCCCCccHHHCCCcC-CCcceeEEecCCCEEEEEEC----------CEEE
Confidence 589999977 468999987764321 1111 111 122333333344 9999965 4588
Q ss_pred EEeCCCCC
Q 016201 201 VLDSETRK 208 (393)
Q Consensus 201 ~yd~~~~~ 208 (393)
+||..+.+
T Consensus 170 r~d~~~~~ 177 (196)
T 3c7x_A 170 KFNNQKLK 177 (196)
T ss_dssp EEETTTTE
T ss_pred EEECCcce
Confidence 99987753
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=34.37 E-value=2.2e+02 Score=24.42 Aligned_cols=100 Identities=12% Similarity=-0.005 Sum_probs=48.9
Q ss_pred hcceeeccCCCC---CeEEcCCCCccccCccEEEE-CCEEEEEecCCCCC----CccceEEEEECCCCceEeCCCCCCCC
Q 016201 96 SATFADLPAPDL---EWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLD----YVHSHVDVYNFTDNKWVDRFDMPKDM 167 (393)
Q Consensus 96 ~~~~~~~~~~~~---~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~----~~~~~~~~yd~~~~~W~~~~~~~~~~ 167 (393)
+..+++|+.... +.+.+..++.|. .+++- ++.|||.-...... .....+.+||+..+.-..+.. +...
T Consensus 206 ~~~I~~~~~~~~~~~~~~~~~~~~gP~---gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~ 281 (322)
T 2fp8_A 206 SHQIVKYWLEGPKKGTAEVLVKIPNPG---NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPF 281 (322)
T ss_dssp GTEEEEEESSSTTTTCEEEEEECSSEE---EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTT
T ss_pred CCeEEEEECCCCcCCccceEEeCCCCC---CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEEC-CCCC
Confidence 346778876542 333332222221 12222 46788875321000 012468899997655444432 2110
Q ss_pred -CcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 168 -AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 168 -~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
.....+++..+++|||... ..+.+.+|++..+
T Consensus 282 ~~~~~~~~~~~~g~L~v~~~--------~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 282 AGEHFEQIQEHDGLLYIGTL--------FHGSVGILVYDKK 314 (322)
T ss_dssp TTSCCCEEEEETTEEEEECS--------SCSEEEEEEC---
T ss_pred ccccceEEEEeCCEEEEeec--------CCCceEEEecccc
Confidence 1223344456899999852 1456888887643
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=34.22 E-value=2.7e+02 Score=25.24 Aligned_cols=133 Identities=14% Similarity=0.053 Sum_probs=71.5
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE--eCCEEEEEeceeCCCCCCCCCeeEEEeCC
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (393)
++.||+.-.. ...++++++....-+.+..-.. ..-.++++ .++.||+.-- + ....++++++.
T Consensus 170 ~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~~~---~~P~~iavdp~~g~ly~td~--~-----~~~~I~~~~~d 233 (400)
T 3p5b_L 170 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENG---SKPRAIVVDPVHGFMYWTDW--G-----TPAKIKKGGLN 233 (400)
T ss_dssp TTEEEEEETT------TTEEEEECTTTCSEEEEEECSS---CCEEEEEEETTTTEEEEEEC--S-----SSCCEEEEETT
T ss_pred CCceEEEECC------CCeEEEEeCCCCceEEEEeCCC---CCcceEEEecccCeEEEEeC--C-----CCCEEEEEeCC
Confidence 7899998542 2468899998776554432111 11224455 4789998741 1 12468899887
Q ss_pred CCCeEeCC--CCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccCCCCCCceeEEEE
Q 016201 206 TRKWDSIP--PLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF 281 (393)
Q Consensus 206 ~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~ 281 (393)
...=+.+. .+..| .++++- +++||+.-.. ...++.+++ + ..+....+.....-....++++.
T Consensus 234 G~~~~~~~~~~l~~P---~glavd~~~~~lY~aD~~-----~~~I~~~d~-----d-G~~~~~~~~~~~~l~~P~gl~v~ 299 (400)
T 3p5b_L 234 GVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDV-----N-GGNRKTILEDEKRLAHPFSLAVF 299 (400)
T ss_dssp SCSCEEEECSSCSCE---EEEEEETTTTEEEEEETT-----TTEEEEEET-----T-SCCCEEEEECSSTTSSEEEEEEE
T ss_pred CCccEEEEECCCCce---EEEEEEeCCCEEEEEECC-----CCEEEEEeC-----C-CCccEEEEeCCCCCCCCEEEEEe
Confidence 64433321 22222 233443 6789998322 334555543 1 22333332221122233467778
Q ss_pred CCEEEEEcC
Q 016201 282 NDRLFVVGG 290 (393)
Q Consensus 282 ~~~iyv~GG 290 (393)
++.||+.--
T Consensus 300 ~~~lywtd~ 308 (400)
T 3p5b_L 300 EDKVFWTDI 308 (400)
T ss_dssp TTEEEEEES
T ss_pred CCEEEEecC
Confidence 999999863
No 272
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=34.02 E-value=3.5e+02 Score=26.53 Aligned_cols=81 Identities=14% Similarity=0.192 Sum_probs=48.8
Q ss_pred ceEEEEECCCC--ceEeCCCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCC---CeEeCCCCCCCC
Q 016201 145 SHVDVYNFTDN--KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR---KWDSIPPLPSPR 219 (393)
Q Consensus 145 ~~~~~yd~~~~--~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r 219 (393)
+.++.+|..+. +|..+..-.. .........++++|+....+ .+...++..|+.+. .|+.+.+-....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~---~~~~~~~~~g~~l~~~t~~~-----~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLD---ADVSLVDNKGSTLYLLTNRD-----APNRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSS---SCEEEEEEETTEEEEEECTT-----CTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred cEEEEEECCCCCCceEEEeCCCC---ceEEEEeccCCEEEEEECCC-----CCCCEEEEEeCCCCCccccEEEecCCCCE
Confidence 57899998765 6777644222 11222445688999986432 22567899998763 487765433222
Q ss_pred CCceEEEECCEEEEEc
Q 016201 220 YSPATQLWRGRLHVMG 235 (393)
Q Consensus 220 ~~~~~~~~~~~iyv~G 235 (393)
. .....++.|++..
T Consensus 331 -~-~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 331 -L-TVHSGSGYLFAEY 344 (693)
T ss_dssp -E-EEEEETTEEEEEE
T ss_pred -E-EEEEECCEEEEEE
Confidence 2 4555567766553
No 273
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=33.66 E-value=1.6e+02 Score=26.57 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=39.9
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEeC---------CCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCe
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR---------FDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSR 198 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---------~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (393)
++++|+|=| +..|+||..+++-..- +.+|. ....++...++++|.|-| +.
T Consensus 284 ~~~~yfFkG--------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~---~iDaA~~~~~g~~YfFkg----------~~ 342 (365)
T 3ba0_A 284 FYRTYFFVD--------NQYWRYDERRQMMDPGYPKLITKNFQGIGP---KIDAVFYSKNKYYYFFQG----------SN 342 (365)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCCCCHHHHSTTCCS---SCSEEEEETTTEEEEEET----------TE
T ss_pred CCEEEEEEC--------CEEEEEeCCcceecCCCCcchhhcCCCCCC---ccceeeEecCCcEEEEeC----------CE
Confidence 479999976 4689999877653321 11221 233333333889999965 45
Q ss_pred eEEEeCCCCCeEe
Q 016201 199 TFVLDSETRKWDS 211 (393)
Q Consensus 199 v~~yd~~~~~W~~ 211 (393)
.|+||..+.+-..
T Consensus 343 ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 343 QFEYDFLLQRITK 355 (365)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCccEEec
Confidence 8899988765443
No 274
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=32.93 E-value=1.7e+02 Score=30.52 Aligned_cols=171 Identities=9% Similarity=-0.037 Sum_probs=0.0
Q ss_pred ceeeccCCCCCeEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEE-EEECCCCceEeCCCCCCCCCcceeEEEE
Q 016201 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVD-VYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 176 (393)
.++.++.....-..+...+..+....... +++.+++++. ...++ .||+.+.+-..+..... ........
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~~~~~---~~~~~~~S 387 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR------EGDFLGIYDYRTGKAEKFEENLG---NVFAMGVD 387 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET------TEEEEEEEETTTCCEEECCCCCC---SEEEEEEC
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC------CCceEEEEECCCCCceEecCCcc---ceeeeEEC
Q ss_pred eCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEECCEEEEEccCCC-----CCCCCCcceeEe
Q 016201 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKE-----NRHTPGLEHWSI 251 (393)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~~~~~~~ 251 (393)
-+++..+++.. ...++.+|+.+.+-..+..-........+..-+++.+++++... ......+..|++
T Consensus 388 pDG~~la~~~~--------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 388 RNGKFAVVAND--------RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp TTSSEEEEEET--------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred CCCCEEEEECC--------CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Q ss_pred eeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCCCC
Q 016201 252 AVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293 (393)
Q Consensus 252 ~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~ 293 (393)
.+.+...+..............-+..|++......
T Consensus 460 -------~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 460 -------EGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp -------TTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCC
T ss_pred -------CCCcEEEeeCCCcccCCceEcCCCCEEEEEecccC
No 275
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=32.45 E-value=2.3e+02 Score=24.05 Aligned_cols=101 Identities=10% Similarity=-0.023 Sum_probs=50.1
Q ss_pred ceeeccCCCCCeEEcCCCC-cccc--CccEEE-ECCEEEEE----ecCCC-------CCCccceEEEEECCCCceEeCCC
Q 016201 98 TFADLPAPDLEWEQMPSAP-VPRL--DGAAIQ-IKNLFYVF----AGYGS-------LDYVHSHVDVYNFTDNKWVDRFD 162 (393)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~~-~~r~--~~~~~~-~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~~~~W~~~~~ 162 (393)
.+..+++. .+.+.+.... ..+. -..+++ -++.||+. |-... .......+++||+.+.+.+.+.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~- 185 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA- 185 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence 57778775 5555553321 1111 112222 26788885 33211 0112357999999888887664
Q ss_pred CCCCCCcceeEEEE-eC-CEEEEEeceeCCCCCCCCCeeEEEeCCCC
Q 016201 163 MPKDMAHSHLGVVS-DG-RYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (393)
Q Consensus 163 ~~~~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 207 (393)
... . ..+++. -+ ..+|+....... .....+++||...+
T Consensus 186 -~~~--~-p~gl~~spdg~~lyv~~~~~~~---~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 186 -DLD--H-PNGLAFSPDEQTLYVSQTPEQG---HGSVEITAFAWRDG 225 (305)
T ss_dssp -EES--S-EEEEEECTTSSEEEEEECCC------CCCEEEEEEEETT
T ss_pred -cCC--C-CcceEEcCCCCEEEEEecCCcC---CCCCEEEEEEecCC
Confidence 211 1 122333 23 458877531110 01256888887654
No 276
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=32.02 E-value=2.2e+02 Score=23.54 Aligned_cols=92 Identities=17% Similarity=0.253 Sum_probs=47.8
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCc--e-EeCCC--CCCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--W-VDRFD--MPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFV 201 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W-~~~~~--~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (393)
++++|+|=| +..|+||..+-. . +.|.. +|........+... .++++|+|-| +..++
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG----------~~ywr 148 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG----------DKFWR 148 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC----------CEEEE
Confidence 589999977 468899842100 0 11222 22211122333332 4789999965 45889
Q ss_pred EeCCCCCeEe-----CCC--CCCCCCCceEEEEC--CEEEEEccC
Q 016201 202 LDSETRKWDS-----IPP--LPSPRYSPATQLWR--GRLHVMGGS 237 (393)
Q Consensus 202 yd~~~~~W~~-----~~~--~p~~r~~~~~~~~~--~~iyv~GG~ 237 (393)
||..+++=.. +.. +..+..-.++...+ +++|+|-|.
T Consensus 149 ~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 149 YNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT
T ss_pred EECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECC
Confidence 9987653111 100 01122223444444 899999654
No 277
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=29.75 E-value=1e+02 Score=28.19 Aligned_cols=70 Identities=10% Similarity=0.113 Sum_probs=41.6
Q ss_pred CCEEEEEec---CCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEE-eCC--EEEEEeceeCCCCCCCCCeeEE
Q 016201 128 KNLFYVFAG---YGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR--YIYIVSGQYGPQCRGPTSRTFV 201 (393)
Q Consensus 128 ~~~iyv~GG---~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~v~~ 201 (393)
++++||.-+ ....+..-+.++++|+.+.+-.. .++.+. + ..++++ .++ .+|+.-+ ..+++..
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~-~-~~~lavs~D~~~~ly~tn~--------~~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGH-E-IDSINVSQDEKPLLYALST--------GDKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEE-E-ECEEEECSSSSCEEEEEET--------TTTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCC-C-cceEEECCCCCeEEEEEcC--------CCCeEEE
Confidence 578999743 22222334789999998877543 333321 2 223333 344 4777642 1577999
Q ss_pred EeCCCCCe
Q 016201 202 LDSETRKW 209 (393)
Q Consensus 202 yd~~~~~W 209 (393)
||..+.+-
T Consensus 359 iD~~t~k~ 366 (386)
T 3sjl_D 359 HDAESGEE 366 (386)
T ss_dssp EETTTCCE
T ss_pred EECCCCcE
Confidence 99998864
No 278
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=29.44 E-value=3.1e+02 Score=24.49 Aligned_cols=24 Identities=8% Similarity=0.178 Sum_probs=17.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCce
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW 157 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 157 (393)
++++++.|+.++ .+.+||+.+.+-
T Consensus 225 ~~~~l~s~~~dg------~i~iwd~~~~~~ 248 (437)
T 3gre_A 225 ECCVLILGTTRG------IIDIWDIRFNVL 248 (437)
T ss_dssp TSCEEEEEETTS------CEEEEETTTTEE
T ss_pred CCCEEEEEcCCC------eEEEEEcCCccE
Confidence 567777787653 488899887654
No 279
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=28.24 E-value=3.5e+02 Score=26.67 Aligned_cols=101 Identities=8% Similarity=0.035 Sum_probs=55.7
Q ss_pred ceeeccCCCC--C-eEEcCCCCccccCccEEEECCEEEEEecCCCCCCccceEEEEECCC--CceEeCCCCCCCCCccee
Q 016201 98 TFADLPAPDL--E-WEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVDRFDMPKDMAHSHL 172 (393)
Q Consensus 98 ~~~~~~~~~~--~-W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~r~~~ 172 (393)
.++.+|..+. . |+.+....... ...+...++.||+....+.. ...++.+|+.+ ..|+.+-+-.. ..-.
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~dg~~l~~~s~~~~~---~~~l~~~d~~~~~~~~~~l~~~~~---~~l~ 367 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQ-WDFVDGVGDQLWFVSGDGAP---LKKIVRVDLSGSTPRFDTVVPESK---DNLE 367 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSC-EEEEEEETTEEEEEECTTCT---TCEEEEEECSSSSCEEEEEECCCS---SEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCce-EEEEeccCCEEEEEECCCCC---CCEEEEEeCCCCccccEEEecCCC---CeEE
Confidence 5666666554 4 66554322111 11122346777777554321 25689999887 57988753322 1112
Q ss_pred EEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEe
Q 016201 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS 211 (393)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~ 211 (393)
.+...++++++....++ ...++.+|+....-..
T Consensus 368 ~~~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 368 SVGIAGNRLFASYIHDA------KSQVLAFDLDGKPAGA 400 (741)
T ss_dssp EEEEEBTEEEEEEEETT------EEEEEEEETTSCEEEE
T ss_pred EEEEECCEEEEEEEECC------EEEEEEEeCCCCceee
Confidence 33445888888765433 4568888875443333
No 280
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=26.31 E-value=71 Score=26.77 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=35.7
Q ss_pred ECCEEEEEecCCCCCCccceEEEEE--CCC-------------CceEeCCCCCCCCCcceeEEEE-eCCEEEEEeceeCC
Q 016201 127 IKNLFYVFAGYGSLDYVHSHVDVYN--FTD-------------NKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGP 190 (393)
Q Consensus 127 ~~~~iyv~GG~~~~~~~~~~~~~yd--~~~-------------~~W~~~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~ 190 (393)
.++++|+|=| +.+|+|+ +.+ ..|.-++.-..+ ..-.++... .++++|+|-|
T Consensus 71 ~~g~~~fFKg--------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p-~~IDAA~~~~~~~k~yfFkG---- 137 (227)
T 3lp9_A 71 ENNEAFIFYE--------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFE-SGIDAAYRSTRGKEVYLFKG---- 137 (227)
T ss_dssp STTEEEEEET--------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTT-TCCSEEEECSSTTEEEEEET----
T ss_pred CCCEEEEEeC--------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCC-CcccEEEEECCCCEEEEEEC----
Confidence 5789999977 4578887 321 123333211001 122333333 3689999975
Q ss_pred CCCCCCCeeEEEeCCCC
Q 016201 191 QCRGPTSRTFVLDSETR 207 (393)
Q Consensus 191 ~~~~~~~~v~~yd~~~~ 207 (393)
+..|+||..++
T Consensus 138 ------~~yw~~d~~~~ 148 (227)
T 3lp9_A 138 ------DQYARIDYGSN 148 (227)
T ss_dssp ------TEEEEEETTTT
T ss_pred ------CEEEEEeCCCc
Confidence 45899998755
No 281
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=25.75 E-value=1.6e+02 Score=26.53 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=0.0
Q ss_pred CCEEEE---EecCCCCCCccceEEEEECCCCceEeCCCCCCCCCcceeEEEEeCC-EEEEEe-ceeCCCCCCCCCeeEEE
Q 016201 128 KNLFYV---FAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGR-YIYIVS-GQYGPQCRGPTSRTFVL 202 (393)
Q Consensus 128 ~~~iyv---~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~-~iyv~G-G~~~~~~~~~~~~v~~y 202 (393)
++++|| -++........+.++++|+.+.+ .+..++.+..-.+.++.-.+. .+|+.. + .+++..+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~--vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~---------~~~V~Vi 346 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ--TSSQISLGHDVDAISVAQDGGPDLYALSAG---------TEVLHIY 346 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCE--EEEEEECCCCcCeEEECCCCCeEEEEEcCC---------CCeEEEE
Q ss_pred eCCCCC
Q 016201 203 DSETRK 208 (393)
Q Consensus 203 d~~~~~ 208 (393)
|..+.+
T Consensus 347 D~~t~~ 352 (373)
T 2mad_H 347 DAGAGD 352 (373)
T ss_pred ECCCCC
No 282
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=25.02 E-value=5.4e+02 Score=25.84 Aligned_cols=181 Identities=14% Similarity=0.262 Sum_probs=88.9
Q ss_pred CCeEEcCCCCccccCccEEEE---CCEEEEEecCCCCCCccceEEEEECCCCceEeCCCCCCC---CCcceeEEEEe---
Q 016201 107 LEWEQMPSAPVPRLDGAAIQI---KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD---MAHSHLGVVSD--- 177 (393)
Q Consensus 107 ~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~---~~r~~~~~~~~--- 177 (393)
.+|+.+.+....| -.++++. .+.+|+. +.. .-+++-+-...+|+.+...+.+ ..+.-.++++.
T Consensus 4 ~~W~~~~~~~~g~-i~~i~~~p~~~~~~~a~-~~~------ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~ 75 (789)
T 1sqj_A 4 YEFKNVAIGGGGY-ITGIVAHPKTKDLLYAR-TDI------GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNN 75 (789)
T ss_dssp CEEEECCCCBCSC-EEEEEECSSSTTCEEEE-ESS------SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTE
T ss_pred ccceEccCCCCCc-EEEEEECCCCCCEEEEE-ecC------CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCC
Confidence 4798887632222 2222322 2456664 321 2367777778899998653321 01234455543
Q ss_pred CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCC-CCC-----CC-CCceEEEE---CCEEEEEccCCCCCCCCCcc
Q 016201 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP-LPS-----PR-YSPATQLW---RGRLHVMGGSKENRHTPGLE 247 (393)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~ 247 (393)
.+.+|+..|..... ....+++=+-.-.+|+++.. ++. .| ..+.+++. .+.+|+. ... ..
T Consensus 76 ~~~i~~~~g~~~~~---~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~-------~g 144 (789)
T 1sqj_A 76 PDRLYLAQGRYVGD---EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRT-------EG 144 (789)
T ss_dssp EEEEEEEECSCTTS---SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSS-------SC
T ss_pred CCEEEEEeCccCCC---cccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-ecc-------CC
Confidence 25788876532100 01445555555678998752 111 12 22344444 3456663 321 11
Q ss_pred eeEeeeeccccccCCeEEeccCCC---CCCceeEEEE----CCEEEEEcCCCCCCCCCCCCCccccccccceecCceEEe
Q 016201 248 HWSIAVKDGKALEKAWRTEIPIPR---GGPHRACFVF----NDRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVYML 320 (393)
Q Consensus 248 ~~~~~~~d~~~~~~~W~~~~~~p~---~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 320 (393)
.|.- +....+|+.+..+|. .......+.+ .+.||+...... .+++=
T Consensus 145 l~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~----------------------~v~~S 197 (789)
T 1sqj_A 145 IWKS-----SDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQ----------------------GMYVT 197 (789)
T ss_dssp EEEE-----SSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTT----------------------CEEEE
T ss_pred EEEE-----CCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCC----------------------eEEEE
Confidence 2221 025678999876542 1122333443 246777553211 15543
Q ss_pred -CCCCCeEECCCCC
Q 016201 321 -DDEMKWKVLPPMP 333 (393)
Q Consensus 321 -d~~~~W~~~~~~~ 333 (393)
|...+|+.+..++
T Consensus 198 ~DgG~TW~~~~~~~ 211 (789)
T 1sqj_A 198 HDGGVSWEPVAGQP 211 (789)
T ss_dssp SSTTSSCEECTTCC
T ss_pred cCCCcCcccCCCCc
Confidence 3556999987554
No 283
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=24.32 E-value=3.5e+02 Score=23.51 Aligned_cols=23 Identities=13% Similarity=0.026 Sum_probs=15.2
Q ss_pred CCEEEEEeceeCCCCCCCCCe-eEEEeCCCCC
Q 016201 178 GRYIYIVSGQYGPQCRGPTSR-TFVLDSETRK 208 (393)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~-v~~yd~~~~~ 208 (393)
++++++.|+.+ .. +..||..+.+
T Consensus 206 ~g~~l~s~s~d--------~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 206 KSDMVATCSQD--------GTIIRVFKTEDGV 229 (355)
T ss_dssp TSSEEEEEETT--------CSEEEEEETTTCC
T ss_pred CCCEEEEEeCC--------CCEEEEEECCCCc
Confidence 66777777643 33 7788887654
No 284
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=24.18 E-value=3.7e+02 Score=23.64 Aligned_cols=160 Identities=14% Similarity=0.066 Sum_probs=82.7
Q ss_pred cceeeccCCCCCeEEcCC--CCccccCccEEE--ECCEEEEEecCCCCCCccceEEEEECCCCceEeCC--CCCCCCCcc
Q 016201 97 ATFADLPAPDLEWEQMPS--APVPRLDGAAIQ--IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHS 170 (393)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~--~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~ 170 (393)
..++++++....-+.+.. +..| .++++ .++.||+.-.. ...++++++....-+.+. .+..
T Consensus 95 ~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~l~~----- 160 (349)
T 3v64_C 95 DRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEK----- 160 (349)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCC---CEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECTTCSC-----
T ss_pred CceEEEecCCCCceEEEeCCCCCc---cEEEEecCCCeEEEEcCC------CCeEEEEcCCCCceEEEEeCCCCC-----
Confidence 367777776654433321 2222 23343 36899997542 246899998876533332 2222
Q ss_pred eeEEEEe--CCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCc
Q 016201 171 HLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGL 246 (393)
Q Consensus 171 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 246 (393)
-.++++. ++.||+.--. ....++++++....-+.+..-... .-.++++- +++||+.-.. ...+
T Consensus 161 P~~iavdp~~g~ly~td~~-------~~~~I~r~~~dG~~~~~~~~~~~~-~PnGla~d~~~~~lY~aD~~-----~~~I 227 (349)
T 3v64_C 161 PRAIALHPMEGTIYWTDWG-------NTPRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRMYWVDAK-----HHVI 227 (349)
T ss_dssp EEEEEEETTTTEEEEEECS-------SSCEEEEEETTSCSCEESCCSSCS-CEEEEEEETTTTEEEEEETT-----TTEE
T ss_pred cceEEEecCcCeEEEeccC-------CCCEEEEEeCCCCCcEEEEECCCC-CcceEEEeCCCCEEEEEECC-----CCEE
Confidence 2244444 7899998521 136799999876554444321111 11233443 6889998422 2344
Q ss_pred ceeEeeeeccccccCCeEEeccCCCCCCceeEEEECCEEEEEcCC
Q 016201 247 EHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQ 291 (393)
Q Consensus 247 ~~~~~~~~d~~~~~~~W~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 291 (393)
+++++ + .++. +.+.... ...-.++++.++.||+.--.
T Consensus 228 ~~~~~-----d-G~~~-~~~~~~~-~~~P~giav~~~~ly~td~~ 264 (349)
T 3v64_C 228 ERANL-----D-GSHR-KAVISQG-LPHPFAITVFEDSLYWTDWH 264 (349)
T ss_dssp EEEET-----T-SCSC-EEEECSS-CSSEEEEEEETTEEEEEETT
T ss_pred EEEeC-----C-CCce-EEEEeCC-CCCceEEEEECCEEEEecCC
Confidence 44442 2 1221 2221111 11234666689999998543
No 285
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=23.51 E-value=3.6e+02 Score=25.71 Aligned_cols=160 Identities=10% Similarity=0.076 Sum_probs=0.0
Q ss_pred eeEEEEeCCEEEEEeceeCCCCCCCCCeeEEEeCCCCCeEeCCCCCCCCCCceEEEE-CCEEEEEccCCCCCCCCCccee
Q 016201 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHW 249 (393)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 249 (393)
++++...+|.+++-.-...... .....+..-|-...+|+....++.......++.. +++|++.--..........+.-
T Consensus 328 G~GI~l~dGrLv~P~~~~~~~g-~~~s~i~~S~D~G~TW~~~~~~~~~~~e~~vve~~dG~L~~~~R~~~~g~r~v~~S~ 406 (523)
T 4fj6_A 328 GRGITMQDGTLVFPIQFIDATR-VPNAGIMYSKDRGKTWHLHNLARTNTTEAQVAEVEPGVLMLNMRDNRGGSRAVATTK 406 (523)
T ss_dssp EECEECTTSCEEEEEEEECTTS-CEEEEEEEESSTTSSCEECCCSEETEEEEEEEEEETTEEEEEEEETTCSBCEEEEES
T ss_pred CcceEEeCCeEEEEEEEEcCCC-CEEEEEEEECCCCCeEEECCCCCccccCCEEEEecCCEEEEEEEecCCCcEEEEEEC
Q ss_pred EeeeeccccccCCeEEec----cCCCCCCceeEEEEC-------CEEEEEcCCCCCCCCCCCCCccccccccceecCceE
Q 016201 250 SIAVKDGKALEKAWRTEI----PIPRGGPHRACFVFN-------DRLFVVGGQEGDFMAKPGSPIFKCSRRHEVVYGDVY 318 (393)
Q Consensus 250 ~~~~~d~~~~~~~W~~~~----~~p~~~~~~~~~~~~-------~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (393)
| ...+|+... .+|.+.+..++..+. ..++++..-... ....-..--.
T Consensus 407 D--------~G~TWt~~~~~~~~L~~P~c~~Sii~~~~~~~~~g~~~lL~snp~~~--------------~~R~~l~v~~ 464 (523)
T 4fj6_A 407 D--------LGKTWTEHPSSRSALQESVCMASLIKVNAKDNITGKDLLLFSNPNTT--------------KGRNHITIKA 464 (523)
T ss_dssp S--------TTSSCEECTTTTTSSBCSSCCCEEEEECGGGSTTCSCEEEEEEECCS--------------SSSCCEEEEE
T ss_pred C--------CCCccCcCcCccccCCCCCcccEEEEEecccCCCCCcEEEEEccCCC--------------CccccceEEE
Q ss_pred EeCCCCCeEECCCC---CCCCCCcceeEEEECCEEEEE
Q 016201 319 MLDDEMKWKVLPPM---PKPNSHIECAWVIVNNSIIIT 353 (393)
Q Consensus 319 ~yd~~~~W~~~~~~---~~~r~~~~~~~~~~~~~i~v~ 353 (393)
.+|...+|.....+ ..+....++.+..-+|+|.++
T Consensus 465 S~D~G~TW~~~~~v~~~~~~~~~Ys~l~~~~dG~i~il 502 (523)
T 4fj6_A 465 SLDGGLTWPTEHQVLLDEAEGWGYSCLSMIDKETVGIF 502 (523)
T ss_dssp ESSTTSCCCGGGEEEEECSCCCCCEEEEECSSSEEEEE
T ss_pred eCCCCCCCccCceEEEcCCCCcccceEEEcCCCEEEEE
No 286
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=22.05 E-value=3.8e+02 Score=23.04 Aligned_cols=199 Identities=12% Similarity=0.088 Sum_probs=94.8
Q ss_pred eeeeeecCCCceEEe-cCCCCCccccccceeEEecCCcc-hhhHHhhcceeeccCCC----CCeEEc-C-CCCccccCcc
Q 016201 52 VASNWALEKSGVVVI-PHVNATKIDRQRESVAVIDKKGQ-DAERFLSATFADLPAPD----LEWEQM-P-SAPVPRLDGA 123 (393)
Q Consensus 52 ~~~~~d~~~~~W~~~-~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~W~~~-~-~~~~~r~~~~ 123 (393)
.+.++|+.+.....+ +.+. ...++.+-...+. --.+..+..++++++.. ..-+.+ . .+..| .+
T Consensus 11 ~I~~i~~~~~~~~~~~~~~~------~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~g 81 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNLR------NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP---DG 81 (316)
T ss_dssp SEEEEETTSCCCEEEECSCS------SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC---CE
T ss_pred eEEEEECCCcceEehhcCCC------ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc---CE
Confidence 466778777665443 2222 2233333221111 01112234677777654 222222 1 12222 33
Q ss_pred EEE--ECCEEEEEecCCCCCCccceEEEEECCCCceEeCC--CCCCCCCcceeEEEE--eCCEEEEEeceeCCCCCCCCC
Q 016201 124 AIQ--IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTS 197 (393)
Q Consensus 124 ~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 197 (393)
+++ .++.||+.-.. ...++++|+....-+.+. .+.. -.++++ .++.||+..-. ...
T Consensus 82 lavd~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~-----P~~iavdp~~g~ly~~d~~-------~~~ 143 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSK-----PRAIVVDPVHGFMYWTDWG-------TPA 143 (316)
T ss_dssp EEEETTTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCC-----EEEEEEETTTTEEEEEECS-------SSC
T ss_pred EEEeecCCeEEEEECC------CCEEEEEeCCCCceEEEEECCCCC-----cceEEeCCCCCEEEEEccC-------CCC
Confidence 444 36899997432 256889998876443332 2222 224444 47899998521 135
Q ss_pred eeEEEeCCCCCeEeCCCCCCCCCCceEEEE--CCEEEEEccCCCCCCCCCcceeEeeeeccccccCCeEEeccC-CCCCC
Q 016201 198 RTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPI-PRGGP 274 (393)
Q Consensus 198 ~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~d~~~~~~~W~~~~~~-p~~~~ 274 (393)
.++++++....-+.+..... ..-.++++- +++||+.-.. ...++++++ + ...-+.+... .....
T Consensus 144 ~I~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~-----d--g~~~~~~~~~~~~~~~ 210 (316)
T 1ijq_A 144 KIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDV-----N--GGNRKTILEDEKRLAH 210 (316)
T ss_dssp EEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEET-----T--SCSCEEEEECTTTTSS
T ss_pred eEEEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC-----CCeEEEEec-----C--CCceEEEeecCCccCC
Confidence 69999987654443321111 111234443 6789988432 234444442 2 2222222221 11223
Q ss_pred ceeEEEECCEEEEEcC
Q 016201 275 HRACFVFNDRLFVVGG 290 (393)
Q Consensus 275 ~~~~~~~~~~iyv~GG 290 (393)
..++++.++.||+.--
T Consensus 211 P~giav~~~~ly~~d~ 226 (316)
T 1ijq_A 211 PFSLAVFEDKVFWTDI 226 (316)
T ss_dssp EEEEEEETTEEEEEET
T ss_pred cEEEEEECCEEEEEEC
Confidence 3466677899999863
No 287
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=20.91 E-value=4.6e+02 Score=23.53 Aligned_cols=90 Identities=12% Similarity=0.114 Sum_probs=48.3
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCc--e-EeCCCC--CCCCCcceeEEEE-eCCEEEEEeceeCCCCCCCCCeeEE
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--W-VDRFDM--PKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFV 201 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W-~~~~~~--~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~ 201 (393)
++++|+|=| +..|+|+...-. + +.+..+ |.....-..+... .++++|+|-| +..|+
T Consensus 236 ~g~~~fFkg--------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG----------~~yw~ 297 (365)
T 3ba0_A 236 RNQVFLFKD--------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD----------NQYWR 297 (365)
T ss_dssp GTEEEEEET--------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC----------CEEEE
Confidence 789999876 457777654211 1 123332 2211122333333 2589999965 45899
Q ss_pred EeCCCCCeEe-----C----CCCCCCCCCceEEEE-CCEEEEEccC
Q 016201 202 LDSETRKWDS-----I----PPLPSPRYSPATQLW-RGRLHVMGGS 237 (393)
Q Consensus 202 yd~~~~~W~~-----~----~~~p~~r~~~~~~~~-~~~iyv~GG~ 237 (393)
||..+++-.. + +.+| ..--++... ++++|.|-|.
T Consensus 298 yd~~~~~v~~gyPk~I~~~f~g~p--~~iDaA~~~~~g~~YfFkg~ 341 (365)
T 3ba0_A 298 YDERRQMMDPGYPKLITKNFQGIG--PKIDAVFYSKNKYYYFFQGS 341 (365)
T ss_dssp EETTTTEECSSCCCCHHHHSTTCC--SSCSEEEEETTTEEEEEETT
T ss_pred EeCCcceecCCCCcchhhcCCCCC--CccceeeEecCCcEEEEeCC
Confidence 9987653211 0 1122 222344444 8899999663
No 288
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=20.53 E-value=3.7e+02 Score=23.37 Aligned_cols=60 Identities=10% Similarity=0.131 Sum_probs=44.0
Q ss_pred EEECCEEEEEecCCCCC-CccceEEEEEC-CCCceEeCCCCCCCCCcceeEEEEeCCEEEEEece
Q 016201 125 IQIKNLFYVFAGYGSLD-YVHSHVDVYNF-TDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQ 187 (393)
Q Consensus 125 ~~~~~~iyv~GG~~~~~-~~~~~~~~yd~-~~~~W~~~~~~~~~~~r~~~~~~~~~~~iyv~GG~ 187 (393)
...+++.+++|-....+ ...+.|.-|.- ..++|+.++. +. ......-++-+++.+. +||.
T Consensus 37 F~~~Gk~~I~GRVE~Rd~se~S~V~fFeet~~d~w~~v~~-~~-~~LqDPF~t~I~gEli-~GGv 98 (315)
T 2b4w_A 37 FSYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPE-LS-WELEDPYIAKINNEMI-FGGT 98 (315)
T ss_dssp EEETTEEEEEEEEECTTCSSCCEEEEEEEEETTEEEECTT-CC-BSCEEEEEEEETTEEE-EEEE
T ss_pred eeECCEEEEEeeeecCCCccccEEEEEEEcCCCceEECCC-CE-EEecCccEEEECCEEE-eeeE
Confidence 45689999999887666 34467777765 7899999888 44 2366777888899765 5554
No 289
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=20.34 E-value=2.1e+02 Score=26.79 Aligned_cols=59 Identities=15% Similarity=0.285 Sum_probs=38.1
Q ss_pred CCEEEEEecCCCCCCccceEEEEECCCCceEe-----C----CCCCCCCCcceeEEEEeCCEEEEEeceeCCCCCCCCCe
Q 016201 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----R----FDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSR 198 (393)
Q Consensus 128 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~----~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (393)
++++|+|=| +..|+||..+++-.. + +.+|. .-. ++...++++|.|-| +.
T Consensus 367 ~~k~yfFkG--------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~---~iD-AA~~~~g~~YFFkg----------~~ 424 (450)
T 1su3_A 367 TGKTYFFVA--------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH---KVD-AVFMKDGFFYFFHG----------TR 424 (450)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCSEEHHHHSTTSCS---CCS-EEEEETTEEEEEET----------TE
T ss_pred CCeEEEEeC--------CEEEEEeCCCccccCCCCcchhhcCCCCCC---Ccc-EEEEcCCeEEEEeC----------CE
Confidence 589999977 468999987654321 1 11221 223 33346899999975 45
Q ss_pred eEEEeCCCCC
Q 016201 199 TFVLDSETRK 208 (393)
Q Consensus 199 v~~yd~~~~~ 208 (393)
.|+||..+.+
T Consensus 425 ywr~d~~~~~ 434 (450)
T 1su3_A 425 QYKFDPKTKR 434 (450)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCcce
Confidence 7889887765
Done!