Your job contains 1 sequence.
>016208
MDIVSANRKRNFAGRILVASVLTAVFIFMFSLSPDSNSTKAFPRHEPGVTHVLVTGGAGY
IGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGDAKAVNKIF
AENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIYSSTCATYG
EPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGE
APHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALA
NAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDE
LNWTARFTDLQGSLQIAWRWQKTHINGYGSRNN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016208
(393 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 1664 3.4e-171 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 1589 3.1e-163 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 707 8.9e-70 1
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 675 2.2e-66 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 673 3.6e-66 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 660 8.5e-65 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 647 2.0e-63 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 639 1.4e-62 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 627 2.7e-61 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 626 3.4e-61 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 626 3.4e-61 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 622 9.0e-61 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 608 2.7e-59 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 606 4.5e-59 1
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 605 5.7e-59 1
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 603 9.3e-59 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 602 1.2e-58 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 601 1.5e-58 1
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 600 1.9e-58 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 597 4.0e-58 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 595 6.6e-58 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 594 8.4e-58 1
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 591 1.7e-57 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 587 4.6e-57 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 586 5.9e-57 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 584 9.6e-57 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 582 1.6e-56 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 579 3.3e-56 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 579 3.3e-56 1
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 579 3.3e-56 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 571 2.3e-55 1
SGD|S000000223 - symbol:GAL10 "UDP-glucose-4-epimerase" s... 562 2.1e-54 1
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 555 1.1e-53 1
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 550 3.8e-53 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 547 8.0e-53 1
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 496 2.0e-47 1
UNIPROTKB|Q5QPP4 - symbol:GALE "UDP-glucose 4-epimerase" ... 332 1.9e-37 2
UNIPROTKB|Q5QPP3 - symbol:GALE "UDP-glucose 4-epimerase" ... 389 4.4e-36 1
ASPGD|ASPL0000035245 - symbol:AN2951 species:162425 "Emer... 282 2.6e-33 2
ASPGD|ASPL0000073187 - symbol:ugeA species:162425 "Emeric... 360 5.2e-33 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 332 4.9e-30 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 328 1.3e-29 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 223 1.4e-26 2
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 293 6.6e-26 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 293 6.6e-26 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 288 2.2e-25 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 288 2.2e-25 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 221 1.6e-24 2
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 223 2.2e-23 2
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 265 6.1e-23 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 265 6.1e-23 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 205 9.1e-23 2
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 224 1.5e-22 2
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 218 6.7e-22 2
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 254 1.3e-21 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 217 1.4e-21 2
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 253 1.7e-21 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 253 1.7e-21 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 221 2.7e-21 2
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 266 3.1e-21 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 210 4.6e-21 2
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 211 1.4e-20 2
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 213 2.2e-20 2
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 208 2.5e-20 2
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 199 2.7e-20 2
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 213 3.3e-20 2
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 246 5.6e-20 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 185 8.9e-20 2
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 224 1.2e-19 2
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 201 4.7e-19 2
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 200 4.8e-19 2
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 249 5.0e-19 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 177 8.3e-19 2
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 239 7.6e-18 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 206 1.2e-17 2
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 169 1.2e-17 2
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 162 6.0e-17 2
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 228 6.2e-17 2
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 220 6.3e-17 2
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 169 1.3e-16 2
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 226 2.7e-16 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 225 3.6e-16 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 219 4.9e-16 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 219 8.0e-16 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 221 2.9e-15 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 154 3.7e-15 2
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 195 8.4e-15 2
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 210 1.0e-14 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 207 1.9e-14 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 200 3.3e-13 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 141 4.5e-13 3
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 193 9.5e-13 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 170 1.0e-12 2
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 192 1.3e-12 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 188 3.3e-12 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 188 3.9e-12 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 185 6.8e-12 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 184 9.1e-12 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 182 1.8e-11 1
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 180 2.1e-11 1
WARNING: Descriptions of 112 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 1664 (590.8 bits), Expect = 3.4e-171, P = 3.4e-171
Identities = 315/389 (80%), Positives = 344/389 (88%)
Query: 1 MDIVSANRKRNFAGRILVASVLTAVFIFMFSLSPDSNSTKAFPRHEPGVTHVLVTGGAGY 60
+D +K N+ G+IL+ + LTA+ IFM SP N+ F RHEPGVTHVLVTGGAGY
Sbjct: 22 LDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGAGY 81
Query: 61 IGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGDAKAVNKIF 120
IGSHAALRLLK+SYRVTIVDNLSRGN+ AV++LQELFP+PG+LQFIYADLGDAKAVNKIF
Sbjct: 82 IGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVNKIF 141
Query: 121 AENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIYSSTCATYG 180
ENAFDAVMHFAAVAYVGEST PL+YYHNITSNTLV+LE MAAH VKTLIYSSTCATYG
Sbjct: 142 TENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTCATYG 201
Query: 181 EPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGE 240
EPD MPITE TPQ PINPYGKAKKM+EDII+DFSK ++MAVMILRYFNVIGSDPEGRLGE
Sbjct: 202 EPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGE 261
Query: 241 APHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALA 300
AP PELREHGRISGACFDAARGI+PGL+I+GTDY TADGTCVRDYIDVTDLVDAHV AL
Sbjct: 262 APRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTCVRDYIDVTDLVDAHVKALQ 321
Query: 301 NAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDE 360
AKP KVGIYNVGTGKG SVKEFVEACKKATGV IK++YL RR GDYAEVYSDPSKIR E
Sbjct: 322 KAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKE 381
Query: 361 LNWTARFTDLQGSLQIAWRWQKTHINGYG 389
LNWTA+ T+L+ SL+ AWRWQK H NGYG
Sbjct: 382 LNWTAKHTNLKESLETAWRWQKLHRNGYG 410
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 1589 (564.4 bits), Expect = 3.1e-163, P = 3.1e-163
Identities = 302/390 (77%), Positives = 336/390 (86%)
Query: 1 MDIVSANRKRNFAGRILVASVLTAVFIFMFSLSPDSNSTKAFPRHEPGVTHVLVTGGAGY 60
MD + K N G++L+ + L + I + S S S AF + E GVTHVLVTGGAGY
Sbjct: 46 MDCLEPKTKNNLTGKLLLVASLLILAIIVISQSSSFTSPSAFSQREEGVTHVLVTGGAGY 105
Query: 61 IGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGDAKAVNKIF 120
IGSHAALRLL+DSYRVTIVDNLSRGN+GAVK LQ+LFPQ G+LQFIYADLGD AV KIF
Sbjct: 106 IGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLGDPLAVEKIF 165
Query: 121 AENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIYSSTCATYG 180
+ENAFDAVMHFAAVAYVGESTL PL+YYHNITSNTL +LEAMA HKVK LIYSSTCATYG
Sbjct: 166 SENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVKKLIYSSTCATYG 225
Query: 181 EPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGE 240
EP+KMPITE TPQ PINPYGKAKKM+ED+I+DFSK ++MAVMILRYFNVIGSDP GRLGE
Sbjct: 226 EPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPGGRLGE 285
Query: 241 APHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALA 300
AP PELRE GRISGACFDAARG IPGL+++GTDY T+DGTC+RDYIDVTDLVDAHV AL
Sbjct: 286 APRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTCIRDYIDVTDLVDAHVKALE 345
Query: 301 NAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDE 360
A+P KVGIYNVGTGKGRSVKEFVEACKKATGV IKV++L RRPGDYAEVYSDP+KI +
Sbjct: 346 KAQPRKVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPRRPGDYAEVYSDPTKILKD 405
Query: 361 LNWTARFTDLQGSLQIAWRWQKTHINGYGS 390
LNWTARFT+LQ SLQ+AWRWQK H +GY S
Sbjct: 406 LNWTARFTNLQDSLQVAWRWQKIHPHGYNS 435
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 147/349 (42%), Positives = 205/349 (58%)
Query: 49 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIY- 107
V ++LVTGGAGYIGSH L+LL Y ++DNL ++ +++ +++L GQ ++
Sbjct: 2 VGNILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQ 61
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKV 167
DL D A+ K+F+E FDAVMHFA + VGES +PL YY+N T+ +LE MAAH
Sbjct: 62 VDLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGC 121
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSK-TTNMAVMILRY 226
K L++SS+ YG P ++P TE +P ++PYG+ K EDI D + +++LRY
Sbjct: 122 KKLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQRGDPEWRIIMLRY 181
Query: 227 FNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYI 286
FN +G+ P GR+GE P + G +P LKI GTDY T DGT VRDYI
Sbjct: 182 FNPVGAHPSGRIGEDP---CGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYI 238
Query: 287 DVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRP 344
V DL D H+ AL ++G +YN+GTGKG +V E V+A +KA+G+ I + + RRP
Sbjct: 239 HVVDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRP 298
Query: 345 GDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSRNN 393
GD VY+ K ELNW A F ++ + W W + GYGS N
Sbjct: 299 GDAETVYASTEKAERELNWKANF-GIEEMCRDQWNWASNNPFGYGSSPN 346
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 143/344 (41%), Positives = 198/344 (57%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQ-LQFIYAD 109
+VLV+GGAGYIGSH L+LL Y V +VDNL + +++ +++L + G+ L F D
Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
L D A+ KIF+E FDAV+HFA + VGES +PL YY+N T+ +LE MA H K
Sbjct: 65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124
Query: 170 LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIID-FSKTTNMAVMILRYFN 228
L++SS+ YG P ++P TE P +NPYG+ K E+I D + +++LRYFN
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRYFN 184
Query: 229 VIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDV 288
+G+ P G +GE P + A G P L + G DYNT DGT VRDYI V
Sbjct: 185 PVGAHPSGDIGEDPRGI---PNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHV 241
Query: 289 TDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGD 346
DL D H+ AL + K+G +YN+GTG G SV E V+A +KA+G I + RRPGD
Sbjct: 242 IDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGD 301
Query: 347 YAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGS 390
VY+ + ELNW A++ ++ + W W + GY S
Sbjct: 302 AEVVYASTERAESELNWKAKY-GIEEMCRDLWNWASNNPYGYDS 344
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 144/337 (42%), Positives = 197/337 (58%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTGGAGYIGSH +L + +V +VDNLS+G+ AV +L I D G
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAVDTRAKL---------IVGDFG 52
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D + +IF + AV+H AA + VGES +P +Y+ S TL +L+ M VK ++
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMV 112
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIG 231
+SST A YGEP+K PITE PQKP N YG +K + E + + + + LRYFN G
Sbjct: 113 FSSTAAVYGEPEKWPITEDFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAAG 172
Query: 232 SDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDL 291
+DP G +GE +PE H + F G L + GTDY T DGTC+RDYI V DL
Sbjct: 173 ADPSGDIGEDHNPET--H--LIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDL 228
Query: 292 VDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVY 351
+AH+LAL + G+YN+G KG SVKE ++ ++ TGV +KV Y RRPGD A +
Sbjct: 229 AEAHILALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLV 288
Query: 352 SDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
+ KI+ ELN+T +F D++ +Q AW W K + GY
Sbjct: 289 ASSEKIQKELNFTPKFGDIKTIVQTAWEWHKNNPRGY 325
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 143/346 (41%), Positives = 197/346 (56%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPG-QLQFIYADL 110
VLVTGGAGYIGSH L+LL+ Y +VDN + +++ +++L + G +L F DL
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D A+ KIF+E FDAV+HFA + VGES +PL YY+N T+ +LE MA + K L
Sbjct: 65 RDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKNL 124
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKT-TNMAVMILRYFNV 229
++SS+ YG P ++P TE +P NPYG+ K E+I D ++ + +++LRYFN
Sbjct: 125 VFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP 184
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVT 289
+G+ P G +GE P L + A G P L + GTDY T DGT VRDYI V
Sbjct: 185 VGAHPSGYIGEDP---LGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVM 241
Query: 290 DLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDY 347
DL D H+ AL K+ +YN+GTG G SV E V A +KA+G I + RRPGD
Sbjct: 242 DLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDA 301
Query: 348 AEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSRNN 393
VY+ K ELNW A+ ++ + W W + GY S +N
Sbjct: 302 EVVYASTEKAERELNWKAK-NGIEEMCRDLWNWASNNPYGYNSSSN 346
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 139/339 (41%), Positives = 198/339 (58%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAGYIGSH + LL ++Y++ +VDNLS ++ ++ ++E+ + Q +F ++
Sbjct: 3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGK--QFEFYKENVL 60
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ + +N+IF EN +AV+HFA VGEST PL YY+N + +V+ + M H VK I
Sbjct: 61 NREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFI 120
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTN-MAVMILRYFNVI 230
+SS+ YG P +PITE P NPYG+ K M E I+ D +K + ++ +LRYFN
Sbjct: 121 FSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRYFNPF 180
Query: 231 GSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTD 290
G+ GR+GE P+ + A G + L I G DY T DGT VRDYI V D
Sbjct: 181 GAHQSGRIGEDPNGI---PNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHVVD 237
Query: 291 LVDAHVLALANAKPGK-VGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAE 349
L HV AL K + YN+GTGKG SV E V+A +K +G I + + RRPGD A
Sbjct: 238 LAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIPYKVIGRRPGDVAI 297
Query: 350 VYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
++D SK + EL W A + L+ +WRWQ + NGY
Sbjct: 298 CFADVSKAKRELGWEAEY-GLEEMCVDSWRWQVNNKNGY 335
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 141/347 (40%), Positives = 203/347 (58%)
Query: 46 EPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQF 105
EP ++VTGGAGYIGSH + L++ Y IVDNLS ++ A+K ++ + + +++F
Sbjct: 2 EPIDDRIMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGK--EIEF 59
Query: 106 IYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH 165
+ D+ + KA+++IF +V+HFA + VGES PL+YY+N + TL +L M H
Sbjct: 60 HHVDIMNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKH 119
Query: 166 KVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDF-SKTTNMAVMIL 224
+VK L++SS+ YG+P +PITE P NPYG+ K E I+ D + ++L
Sbjct: 120 RVKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIML 179
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
RYFN +G+ P G +GE P ++ + + A G P L I G DYNT DGT VRD
Sbjct: 180 RYFNPVGAHPSGLIGEDPK-DIPNN--LMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRD 236
Query: 285 YIDVTDLVDAHVLALANAKPGKVGI--YNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
+I V DL H+ AL++ K G YN+GTG+G SV E V A K+A+ I + +SR
Sbjct: 237 FIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSR 296
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSL-QIAWRWQKTHINGY 388
R GD A ++DPSK EL W A T Q + + AW+WQ + NGY
Sbjct: 297 RKGDVASSFADPSKALKELGWKA--THNQDDMCRDAWKWQSLNPNGY 341
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 136/332 (40%), Positives = 198/332 (59%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L++GGAGYIGSH + LK + + ++DNLS+G+ A++ LQ++ +F DL
Sbjct: 3 ILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKI----RAFKFFEQDLS 58
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D + V +F FDA++HFAA V ES PL+YY N T NT ++E V I
Sbjct: 59 DFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFI 118
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRYFNVI 230
+SST ATYGEP ++E++P PINPYG++K MSE+++ D S ILRYFNV
Sbjct: 119 FSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVA 178
Query: 231 GSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTD 290
G+ + LG+ +P+ +++ C A G L I G DY+T DGTC+RD+I V D
Sbjct: 179 GACMDYTLGQR-YPKATLLIKVAAEC---AAGKRDKLFIFGDDYDTKDGTCIRDFIHVDD 234
Query: 291 LVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEV 350
+ AH+ L + + ++NVG G G SVKE +EA KK +GV+ KVE RR GD + +
Sbjct: 235 ISSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPSVL 294
Query: 351 YSDPSKIRDELNWTARFTDLQGSLQIAWRWQK 382
SD SKIR+ +W ++ DL+ + A+ W+K
Sbjct: 295 ISDASKIRNLTSWQPKYDDLELICKSAFDWEK 326
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 136/340 (40%), Positives = 195/340 (57%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP-QPGQLQFIYADL 110
VLVTGG GYIGSH +++++ I+DNL + + ++++ +P QF+ D+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRP---QFVQGDI 59
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D + + ++ +AV+HFA + VGES +PL YY N + TLV++ AM VK+L
Sbjct: 60 RDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSL 119
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRYFNV 229
++SS+ YGEP +PITES P K NPYG++K M E+ + DF K + ++ +LRYFN
Sbjct: 120 VFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNP 179
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVT 289
+GS P G LGE P + A G L + G+DY T DGT VRDYI V
Sbjct: 180 VGSHPSGELGEDPQGI---PNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVM 236
Query: 290 DLVDAHVLALANAKP-GKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYA 348
DL D H+ AL + IYN+GTGKG SV + V+A + A+G + + + RRPGD A
Sbjct: 237 DLADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIA 296
Query: 349 EVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
E ++DP+K +L W A +L Q AW WQ + GY
Sbjct: 297 EYWADPTKAAQDLGWKAT-RNLHTMAQDAWCWQSNNPQGY 335
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 136/340 (40%), Positives = 195/340 (57%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP-QPGQLQFIYADL 110
VLVTGG GYIGSH +++++ I+DNL + + ++++ +P QF+ D+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRP---QFVQGDI 59
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D + + ++ +AV+HFA + VGES +PL YY N + TLV++ AM VK+L
Sbjct: 60 RDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSL 119
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRYFNV 229
++SS+ YGEP +PITES P K NPYG++K M E+ + DF K + ++ +LRYFN
Sbjct: 120 VFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNP 179
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVT 289
+GS P G LGE P + A G L + G+DY T DGT VRDYI V
Sbjct: 180 VGSHPSGELGEDPQGI---PNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVM 236
Query: 290 DLVDAHVLALANAKP-GKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYA 348
DL D H+ AL + IYN+GTGKG SV + V+A + A+G + + + RRPGD A
Sbjct: 237 DLADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIA 296
Query: 349 EVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
E ++DP+K +L W A +L Q AW WQ + GY
Sbjct: 297 EYWADPTKAAQDLGWKAT-RNLHTMAQDAWCWQSNNPQGY 335
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 134/340 (39%), Positives = 198/340 (58%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTGGAGYIG+H + LL V ++DNLS ++ A+ ++ + + + F D+
Sbjct: 3 ILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGK--SVTFYQGDIL 60
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ + K+F++++ DAV+HFA + VGES +PL+YY N + TL++ + MA KVK L+
Sbjct: 61 NKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNLV 120
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRYFNVI 230
+SS+ YG+P +PITE P NPYG++K M E I+ D + + + LRYFN +
Sbjct: 121 FSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLRYFNPV 180
Query: 231 GSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTD 290
G+ G +GE P+ ++ + + A G L + G DY T DGT VRDYI V D
Sbjct: 181 GAHASGLIGEDPN-DIPNN--LMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVD 237
Query: 291 LVDAHVLALAN--AKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYA 348
L H+ AL KPG V YN+GTG+G SV + V+A +KA G +I RRPGD A
Sbjct: 238 LAIGHLKALEKLATKPGLV-TYNLGTGQGYSVLDMVKAFEKACGKSIAYLIAPRRPGDIA 296
Query: 349 EVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
Y+DP + +L+W A + L+ +W WQ T+ NGY
Sbjct: 297 ACYADPDHAKTDLDWQATHS-LEDMANSSWHWQSTNPNGY 335
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 140/349 (40%), Positives = 191/349 (54%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKV---LQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L +L Y V VDNL K+ L + G+ + F
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYR 65
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKV 167
D+ D + V +F E+ D V HFAA+ VGES PL+YYHN + T V+LEAMA + V
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNV 125
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQ-KPINPYGKAKKMSEDIIIDFSKTTNM-AVMILR 225
+YSS+ YGEP +P+TE P +PYGK K +E+I+ D K+ AV+ LR
Sbjct: 126 FKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLR 185
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
YFN +G+ GR+GE P+ E + A G P L + G+D+ T DGT VRDY
Sbjct: 186 YFNPVGAHISGRIGEDPNGE---PNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDY 242
Query: 286 IDVTDLVDAHVLALANAKP-GKVGI--YNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
I + DL + HV AL + + G YN+GTG G SV + V+A +KA+G + + R
Sbjct: 243 IHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDR 302
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
R GD A Y+D + +L W A + + WRWQ + NGY ++
Sbjct: 303 RSGDVATCYADATLADKKLGWKAE-RGIDKMCEDTWRWQSQNPNGYANK 350
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 141/342 (41%), Positives = 187/342 (54%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGG+GYIGSH ++LL++ + V I+DNL + V++ L + F+ D+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIR 60
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ + +I ++A D V+HFA + VGES +PL YY N + TL ++ AM A VK I
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 172 YSSTCATYGEPDKMPITESTPQ-KPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRYFNV 229
+SS+ YG+ K+P ES P P +PYGK+K M E I+ D K + ++ +LRYFN
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP 180
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVT 289
+G+ P G +GE P + A G L I G DY T DGT VRDYI V
Sbjct: 181 VGAHPSGDMGEDPQGI---PNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237
Query: 290 DLVDAHVLA---LANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGD 346
DL D HV+A LAN KPG V IYN+G G G SV + V A KA G + + RR GD
Sbjct: 238 DLADGHVVAMEKLAN-KPG-VHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGD 295
Query: 347 YAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
++D SK ELNW T L Q W WQ H GY
Sbjct: 296 LPAYWADASKADRELNWRVTRT-LDEMAQDTWHWQSRHPQGY 336
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 133/348 (38%), Positives = 195/348 (56%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELF-PQPGQ-LQFIYA 108
++LVTGGAG+IG+H ++LLKD ++V+I+DN + AV ++EL P + L F
Sbjct: 8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLG 67
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
DL + + K+F++ FDAV+HFA + VGES P RY+ N T+ + E MA + K
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 169 TLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRYF 227
+++SS+ YG+P+K+P E K +NPYG+ K E+I D K +++LRYF
Sbjct: 128 MMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLRYF 187
Query: 228 NVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYID 287
N +G+ G +GE P + A G +P L + G DY T DG+ VRDYI
Sbjct: 188 NPVGAHESGSIGEDPKGI---PNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIH 244
Query: 288 VTDLVDAHVLALAN--AKPGKVGI--YNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRR 343
V DL D H+ AL A P K+G YN+GTG+G SV E V A +KA+G I ++ RR
Sbjct: 245 VMDLADGHIAALRKLFADP-KIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRR 303
Query: 344 PGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
GD VY+ K EL W A++ + + W+W + GY ++
Sbjct: 304 SGDATAVYASTEKAEKELGWKAKY-GVDEMCRDQWKWANNNPWGYQNK 350
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 142/349 (40%), Positives = 198/349 (56%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ +F ++ F AV+HFA + VGES +PL YY N+T T+ +LE M AH
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDFSKT-TNMAVMIL 224
VK+L++SS+ YG P +P+ E+ P NPYGK+K E++I D + T ++L
Sbjct: 124 VKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTAWNAVLL 183
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
RYFN IG+ GR+GE P + A G L + G DY T DGT VRD
Sbjct: 184 RYFNPIGAHASGRIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRD 240
Query: 285 YIDVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
YI V DL H+ AL K + G IYN+GTG G SV + V+A +KA+G I + ++R
Sbjct: 241 YIHVVDLAKGHIAALKKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 299
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
R GD A Y++PS +EL WTA L + WRWQK + +G+G++
Sbjct: 300 REGDVAACYANPSLAHEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGAQ 347
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 135/338 (39%), Positives = 186/338 (55%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+ GGAGYIGSHA +L+ + V +VDNL G+ A+ G +F DL
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT--------EGA-KFYNGDLR 54
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D + +F + +AVMHFAA + VG S +PL+YY+N L +LE M KV I
Sbjct: 55 DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFI 114
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIG 231
+SST ATYGE D ITE T P N YG+ K E ++ +S+ +N+ I RYFNV G
Sbjct: 115 FSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAG 174
Query: 232 SDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDL 291
+ P G +GE PE H + A G + + G DYNT DGTC+RDYI V DL
Sbjct: 175 ATPNGIIGEDHRPET--H--LIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230
Query: 292 VDAHVLALANAKPG-KVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEV 350
V AH L L + + G + YN+G G G SVKE V+A ++ T I E RR GD A +
Sbjct: 231 VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARL 290
Query: 351 YSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
+ K +++L W R+ +++ ++ AW W + NGY
Sbjct: 291 VASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGY 328
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 139/354 (39%), Positives = 194/354 (54%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSR--------GNMGAVKVLQELFPQPGQ 102
H+LVTG AG+IGSH L LL Y V +DN + GN ++K + +L +
Sbjct: 2 HILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGK--D 59
Query: 103 LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAM 162
+ F D+ D A+ K+F+EN FD ++H AA+ VGES +PL+YY N +L +++
Sbjct: 60 VPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMC 119
Query: 163 AAHKVKTLIYSSTCATYGEPDKMPITES--TPQKPINPYGKAKKMSEDIIIDFSKTT-NM 219
+ VK ++SS+ YG P ++PITE T Q NPYG+ K M E I+ID K
Sbjct: 120 LKYNVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEW 179
Query: 220 AVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADG 279
V++LRYFN +G+ G +GE P + A G +P L I G ++T DG
Sbjct: 180 NVVLLRYFNPVGAHKSGLIGEDPKGV---PNNLMPYVSQVAIGKLPVLTIYGDQFDTVDG 236
Query: 280 TCVRDYIDVTDLVDAHVLALANAKP-GKVG--IYNVGTGKGRSVKEFVEACKKATGVNIK 336
T VRDYI V DL HV A K G +G IYN+GTG G SV++ V+A KK +G +I
Sbjct: 237 TGVRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIP 296
Query: 337 VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGS 390
V+ RPGD A VY DPS +++L W A T L+ W WQ + G+ +
Sbjct: 297 VKIGVPRPGDVASVYCDPSLAQEKLGWRAE-TGLEEMCADLWNWQTKNPQGFSA 349
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 141/349 (40%), Positives = 197/349 (56%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ +F +++F AV+HFA + VGES +PL YY N+T T+ +LE M AH
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAHG 122
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDFSKT-TNMAVMIL 224
VK L++SS+ YG P +P+ E+ P NPYGK+K E++I D + T ++L
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVLL 182
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
RYFN IG+ GR+GE P + A G L + G DY T DGT VRD
Sbjct: 183 RYFNPIGAHASGRIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRD 239
Query: 285 YIDVTDLVDAHVLALANAKPGKVGI--YNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
YI V DL H+ AL K + G YN+GTG G SV + V+A +KA+G I + ++R
Sbjct: 240 YIHVVDLAKGHIAALKKLKE-QCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 298
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
R GD A Y++PS +EL WTA L + WRWQK + +G+G++
Sbjct: 299 REGDVAACYANPSLAHEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGAQ 346
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 142/349 (40%), Positives = 196/349 (56%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + LQ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ ++F +++F AV+HFA + VGES +PL YY N+T + + +LE M AH
Sbjct: 65 MDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGS-IQLLEIMRAHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDFSKTTNM-AVMIL 224
VK L++SS+ YG P +P+ E+ P NPYGK+K E++I D + ++L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNAVLL 183
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
RYFN IG+ G +GE P + A G L + G DY+T DGT VRD
Sbjct: 184 RYFNPIGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRD 240
Query: 285 YIDVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
YI V DL H+ AL K + G IYN+GTG G SV + VEA KKA+G I + ++R
Sbjct: 241 YIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVEAMKKASGQEIPYKVVAR 299
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
R GD A Y++PS EL WTA L + WRWQK + +G+G +
Sbjct: 300 REGDVAACYANPSLALKELGWTA-VLGLDRMCEDLWRWQKQNPSGFGGQ 347
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 140/337 (41%), Positives = 188/337 (55%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGGAGYIGSH +L + Y V + DNLS G A+ G+ + + DL
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALV--------HGE-RLVTGDLS 53
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D ++ +F E F V+HFAA ES PL+YY N T NTL +L A H V+ I
Sbjct: 54 DTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFI 113
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIG 231
+SST A YG PD E + PINPYG +K MSE ++ D M + LRYFNV G
Sbjct: 114 FSSTAAVYGIPDSGVAAEESATVPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFNVAG 173
Query: 232 SDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDL 291
+DP+ R+G+ PE ++S C AA G+ + I GTDY T DGT +RDYI V DL
Sbjct: 174 ADPQARMGQRT-PEATHLIKVS--C-QAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDL 229
Query: 292 VDAHVLALANA-KPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEV 350
AH+ AL+ K G+ NVG G G SV+E ++ ++ +GV+ E RRPGD +
Sbjct: 230 ASAHLAALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRRPGDPPSL 289
Query: 351 YSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHING 387
+ + R L WT R+ +L+ + AWRW+K I+G
Sbjct: 290 VARADRARTLLGWTPRYDNLETIVADAWRWEKK-ISG 325
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 136/341 (39%), Positives = 182/341 (53%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGG+GYIGSH ++LL+ + V I+DNL + V++ L + Q F+ D+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGK--QPTFVEGDIR 60
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ + +I ++A + V+HFA + VGES +PL YY N + TL ++ AM A VK I
Sbjct: 61 NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 172 YSSTCATYGEPDKMPITESTPQ-KPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRYFNV 229
+SS+ YG+ K+P ES P P +PYGK+K M E I+ D K ++ +LRYFN
Sbjct: 121 FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNP 180
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVT 289
+G+ P G +GE P + A G L I G DY D T VRDYI V
Sbjct: 181 VGAHPSGDMGEDPQGI---PNNLIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIHVM 237
Query: 290 DLVDAHVLALANA--KPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDY 347
DL D HV A+ KPG V IYN+G G G SV + V A KA G +K + RR GD
Sbjct: 238 DLADGHVAAMQQLADKPG-VHIYNLGAGIGSSVLDVVNAFSKACGKPVKYHFAPRRDGDL 296
Query: 348 AEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
++D +K ELNW T L Q W WQ H GY
Sbjct: 297 PAYWADATKADKELNWRVTRT-LDEMAQDTWHWQSRHPQGY 336
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 144/351 (41%), Positives = 200/351 (56%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ ++F + +F AV+HFA + VGES +PL YY N+T T+ +LE M AH
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDF---SKTTNMAVM 222
VK L++SS+ YG P +P+ E+ P NPYGK+K E++I D KT N AV+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWN-AVL 182
Query: 223 ILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCV 282
LRYFN G+ G +GE P + A G L + G DY+T DGT V
Sbjct: 183 -LRYFNPTGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYL 340
RDYI V DL H+ AL K + G IYN+GTG G SV + V+A +KA+G I + +
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVV 297
Query: 341 SRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
+RR GD A Y++PS ++EL WTA L + WRWQK + +G+G++
Sbjct: 298 ARREGDVAACYANPSLAQEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGTQ 347
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 138/351 (39%), Positives = 190/351 (54%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMG------AVKVLQELFPQPGQLQF 105
+LVTGGAGYIGSH L+L + Y ++DNL G +++ +Q + P + F
Sbjct: 9 ILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTP--IAF 66
Query: 106 IYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAA 164
D+ D A+ K+F+ + F VMHFA + VGES PL YY+ N+T T+ +LEAM A
Sbjct: 67 QELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTG-TIRLLEAMEA 125
Query: 165 HKVKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDFSKTTN-MAVM 222
+ V+ +++SS+ YG+P +P+ E P NPYGK+K E++I D K +
Sbjct: 126 YSVRNIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNAI 185
Query: 223 ILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCV 282
+LRYFN IG+ G +GE P + A G L + G DY TADGT +
Sbjct: 186 LLRYFNPIGAHESGMIGEDPQGI---PNNLMPYVAQVAVGRQEFLSVFGNDYETADGTGI 242
Query: 283 RDYIDVTDLVDAHVLALANAKPG-KVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLS 341
RDYI V DL H+ AL K IYN+GTG G SV + V+A +KA+G IK +
Sbjct: 243 RDYIHVVDLAKGHIAALKKLKENCGCKIYNLGTGTGYSVLQMVQAMEKASGREIKYKITG 302
Query: 342 RRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSRN 392
RR GD A Y++P EL W A F L + WRWQ + GY S+N
Sbjct: 303 RREGDVAACYANPELAERELGWKAAF-GLDKMCEDLWRWQLQNPTGY-SKN 351
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 140/349 (40%), Positives = 194/349 (55%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ ++F + F AV+HFA + VGES +PL YY N+T T+ +LE M AH
Sbjct: 65 MDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDFSKTTNM-AVMIL 224
VK L++SS+ YG P +P+ E+ P NPYGK+K E++I D + ++L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
RYFN IG+ G +GE P + A G L + G DY+T DGT VRD
Sbjct: 184 RYFNPIGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240
Query: 285 YIDVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
YI V DL H+ AL K + G IYN+GTG G SV + V A +KA+G I + ++R
Sbjct: 241 YIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVRAMEKASGKKIPYKVVAR 299
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
R GD A Y++PS EL WTA L + WRWQK + +G+G++
Sbjct: 300 REGDVAACYANPSLALKELGWTAAL-GLDRMCEDLWRWQKQNPSGFGAQ 347
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 139/349 (39%), Positives = 197/349 (56%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ ++F +++F AV+HFA + VGES +PL YY N+T T+ +LE M AH
Sbjct: 65 MDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDFSKTTNM-AVMIL 224
VK L++SS+ YG P +P+ E+ P NPYGK+K E++I D + ++L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
RYFN IG+ G +GE P + A G L + G DY+T DGT VRD
Sbjct: 184 RYFNPIGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGVRD 240
Query: 285 YIDVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
YI V DL H+ AL K + G IYN+GTG G SV + V+A +KA+G I + ++R
Sbjct: 241 YIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 299
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
R GD A Y++PS EL W+A L + WRWQK + +G+G++
Sbjct: 300 REGDVAACYANPSLALKELGWSAAL-GLDRMCEDLWRWQKQNPSGFGTQ 347
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 136/347 (39%), Positives = 189/347 (54%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFP-QPGQLQFIY 107
+LVTGG GYIGSH + L++ + ++DN S RG + L+ + Q++F
Sbjct: 5 ILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDTQIEFHE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
DL D + KIF ++F AVMHFA + VGES +PLRYY N+T T+ +LE M +H
Sbjct: 65 LDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTG-TINLLEVMQSHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIID-FSKTTNMAVMIL 224
V+ L++SS+ YG+P K+PI E P NPYGK K E++I D + + ++L
Sbjct: 124 VRNLVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAVLL 183
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
RYFN IG+ G++GE P + A G L + G DY+T DGT VRD
Sbjct: 184 RYFNPIGAHISGQIGEDPQGI---PNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTGVRD 240
Query: 285 YIDVTDLVDAHVLALANAKPG-KVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRR 343
YI V DL H+ A+ K +YN+GTG G SV + V A +KA+G I + RR
Sbjct: 241 YIHVVDLAKGHIAAVRKLKDSCGCKVYNLGTGTGYSVLQMVSAMEKASGRKIAYQIAPRR 300
Query: 344 PGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGS 390
GD A Y+D S EL W A F DL+ + WRWQ + G+ +
Sbjct: 301 SGDVASCYADASLAEKELGWKAEF-DLERMCEDLWRWQSQNPTGFSN 346
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 135/353 (38%), Positives = 189/353 (53%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
++LVTGGAGYIGSH + L+ + Y+V IVDNLS + AV ++ + Q + F D+
Sbjct: 5 YILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQ--HVPFYDVDI 62
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
+ + +NK+F + V+HFAA+ VGEST PL YY N S T+ +LE A+ VKT+
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 171 IYSSTCATYGEPDK------MPITESTPQKPINPYGKAKKMSEDIIID-FSKTTNMAVMI 223
++SS+ YG+ + +PI E P P NPYG+ K + E I+ D ++ V I
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVR 283
LRYFN IG+ P G LGE P L + A G L I G DYN+ DGT +R
Sbjct: 183 LRYFNPIGAHPSGLLGEDP---LGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIR 239
Query: 284 DYIDVTDLVDAHVLALANAKP-GKVGIY---NVGTGKGRSVKEFVEACKKATGVNIKVEY 339
DYI V DL H+ ALA K G+Y N+GTGKG +V E A K G + E
Sbjct: 240 DYIHVVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHEV 299
Query: 340 LSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSRN 392
+ RR GD ++ + P + EL W T + + + W+W + G+ N
Sbjct: 300 VGRRAGDVLDLTAKPDRANKELQWKTELT-IDDACKDLWKWTTENPFGFNIEN 351
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 135/353 (38%), Positives = 189/353 (53%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
++LVTGGAGYIGSH + L+ + Y+V IVDNLS + AV ++ + Q + F D+
Sbjct: 5 YILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQ--HVPFYDVDI 62
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
+ + +NK+F + V+HFAA+ VGEST PL YY N S T+ +LE A+ VKT+
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 171 IYSSTCATYGEPDK------MPITESTPQKPINPYGKAKKMSEDIIID-FSKTTNMAVMI 223
++SS+ YG+ + +PI E P P NPYG+ K + E I+ D ++ V I
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVR 283
LRYFN IG+ P G LGE P L + A G L I G DYN+ DGT +R
Sbjct: 183 LRYFNPIGAHPSGLLGEDP---LGIPNNLLPYLAQVAIGRREKLSIFGNDYNSRDGTPIR 239
Query: 284 DYIDVTDLVDAHVLALANAKP-GKVGIY---NVGTGKGRSVKEFVEACKKATGVNIKVEY 339
DYI V DL H+ ALA K G+Y N+GTGKG +V E A K G + E
Sbjct: 240 DYIHVVDLAKGHIAALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHEV 299
Query: 340 LSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSRN 392
+ RR GD ++ + P + EL W T + + + W+W + G+ N
Sbjct: 300 VGRRAGDVLDLTAKPDRANKELQWKTELT-IDDACKDLWKWTTENPFGFNIEN 351
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 128/344 (37%), Positives = 189/344 (54%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELF-PQPG-QLQFIYA 108
++LVTGGAG+IG+H ++LL ++VTI+DNL + AV ++EL P +L+F
Sbjct: 8 NILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLG 67
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
DL + + K+F+ FDAV+HFA + VGES P RY+ N T+ + E MA + K
Sbjct: 68 DLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 169 TLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDF-SKTTNMAVMILRYF 227
+++SS+ YG+P+ +P E + +NPYG+ K E+I D + +++LRYF
Sbjct: 128 MMVFSSSATVYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIILLRYF 187
Query: 228 NVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYID 287
N +G+ GR+GE P + A G +P L + G DY T DG+ VRDYI
Sbjct: 188 NPVGAHESGRIGEDPKGI---PNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYIH 244
Query: 288 VTDLVDAHVLALANA-KPGKVGI--YNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRP 344
V DL D HV AL K+G YN+GTG+G SV E V + +KA+G I ++ RR
Sbjct: 245 VMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCPRRA 304
Query: 345 GDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
GD VY+ K EL W A++ + + W W + G+
Sbjct: 305 GDATAVYASTQKAEKELGWKAKY-GVDEMCRDQWNWANKNPWGF 347
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 132/345 (38%), Positives = 193/345 (55%)
Query: 52 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYAD 109
+L+TGG GYIGSH + LL+ + + IVDNLS + ++ ++++ + + FI AD
Sbjct: 3 LLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKT--VTFIKAD 60
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
+ D A+ ++F E+ +AV+HFA + VGES PL YY N S T+ +L MA ++VK
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKN 120
Query: 170 LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKT-TNMAVMILRYFN 228
L++SS+ YG + P+ E+ NPYG+ K M E ++ D +K+ + ++ LRYFN
Sbjct: 121 LVFSSSATVYGN-NVSPLNETMATSATNPYGQTKLMVEHVLFDLAKSDASWSIACLRYFN 179
Query: 229 VIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDV 288
IG+ G +GE P+ + A G + L+I G DY+T DGT VRDYI V
Sbjct: 180 PIGAHQSGLIGENPNGI---PNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGVRDYIHV 236
Query: 289 TDLVDAHVLAL---ANAKPGKVGIY--NVGTGKGRSVKEFVEACKKATGVNIKVEYLSRR 343
DL HV AL +AK G N+GTG G SV E V K + +I + + RR
Sbjct: 237 VDLAQGHVKALESLGHAKGTVKGCQAINLGTGNGTSVLEIVNTFKDISKQDIPYQVVPRR 296
Query: 344 PGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
GD A VY+D S + L+W A+ DL +Q WRWQ + NG+
Sbjct: 297 AGDLATVYADASLANELLDWQAKL-DLTAMIQDTWRWQSENPNGF 340
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 133/351 (37%), Positives = 183/351 (52%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGGAGYIGSH + L+++ Y + DNLS +V L+ L + F DL
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 71
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D K + K+F E D+V+HFA + VGEST PLRYYHN T+V+LE M + V +
Sbjct: 72 DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 131
Query: 172 YSSTCATYGE----PDKMPITESTPQKPINPYGKAKKMSEDIIIDF--SKTTNMAVMILR 225
+SS+ YG+ P+ +PI E P P NPYG K E+I+ D S + ILR
Sbjct: 132 FSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 191
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
YFN IG+ P G +GE P L + A G L I G DY++ DGT +RDY
Sbjct: 192 YFNPIGAHPSGLIGEDP---LGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 248
Query: 286 IDVTDLVDAHVLALA-----NAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYL 340
I V DL H+ AL N G +N+G+GKG +V E A KA+G+++ +
Sbjct: 249 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVT 308
Query: 341 SRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSR 391
RR GD + + P + + EL W ++ S + W+W + GY R
Sbjct: 309 GRRAGDVLNLTAKPDRAKRELKWQTEL-QVEDSCKDLWKWTTENPFGYQLR 358
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 131/345 (37%), Positives = 193/345 (55%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGGAGYIGSH + LL+ Y V IVDNL + AV +++L + ++ F DL
Sbjct: 9 VLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEKLTGK--KVIFHQVDLL 66
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D A++K+FA AV+HFA + VGES PL YY N S T+ ++E M + V+ +
Sbjct: 67 DEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFV 126
Query: 172 YSSTCATYGEPDK----MPITESTPQKPINPYGKAKKMSEDIIIDFSKTT-NMAVMILRY 226
+SS+ YG+P + +PI ES P++ +PYG+ K E+II D +K ++ +LRY
Sbjct: 127 FSSSATVYGDPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAALLRY 186
Query: 227 FNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYI 286
FN G+ P G LGE P L + A G + L + G DY T+DGT +RDYI
Sbjct: 187 FNPGGAHPSGELGEDP---LGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTSDGTPIRDYI 243
Query: 287 DVTDLVDAHVLALANAKPGKVGI--YNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRP 344
V DL +AHV AL + V +N+G+G G +V + + A KA G ++ + RR
Sbjct: 244 HVCDLAEAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVGRDLPYKVTPRRA 303
Query: 345 GDYAEVYSDPSKIRDELNW-TARFTDLQGSLQIAWRWQKTHINGY 388
GD + ++P++ +EL W T+R + WRWQ+ + G+
Sbjct: 304 GDVVNLTANPTRANEELKWKTSR--SIYEICVDTWRWQQKYPYGF 346
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 135/349 (38%), Positives = 184/349 (52%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
++LVTGGAGYIGSH + L+ Y+V IVDNL AV ++ + + ++F DL
Sbjct: 7 YILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAVARVEFIVRK--SIKFFKLDL 64
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D + + +IF V+HFAA+ VGES PL YY N T+ +L M H+VKT+
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTV 124
Query: 171 IYSSTCATYGEP---DKM-PITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM-AVMILR 225
++SS+ YG+ D M PI ES P P NPYGK K E+II D + N ILR
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPNDPTNPYGKTKYAIENIIKDLHTSDNTWRGAILR 184
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
YFN IG+ P G LGE P L + A G L + G DY++ DGT +RDY
Sbjct: 185 YFNPIGAHPSGLLGEDP---LGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPIRDY 241
Query: 286 IDVTDLVDAHVLAL--ANAKPGKVGIY---NVGTGKGRSVKEFVEACKKATGVNIKVEYL 340
I V DL H+ AL N G+Y N+GTGKG SV + A K G ++ E +
Sbjct: 242 IHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPYEVV 301
Query: 341 SRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYG 389
RR GD + + P++ EL W A + + + + W+W T N +G
Sbjct: 302 GRRTGDVLNLTASPNRANSELKWKAELS-ITDACRDLWKW--TIENPFG 347
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 137/349 (39%), Positives = 192/349 (55%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ +F ++ F AV+HFA + VGES +PL YY N+T T+ +LE M A
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMRAMG 123
Query: 167 VKTLIYSSTCATYGEPDKMPIT-ESTPQKPIN-PYGKAKKMSEDIIIDFSKT-TNMAVMI 223
VK+L++SS+ YG+P +P + P + PYGK+K E++I D + T ++
Sbjct: 124 VKSLVFSSSATVYGKP--VPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVL 181
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVR 283
LRYF IG+ R+GE P + A G L + G DY T DGT VR
Sbjct: 182 LRYFIPIGAHRSARIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVR 238
Query: 284 DYIDVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLS 341
DYI V DL H+ AL K + G IYN+GTG G SV + V+A +KA+G I + ++
Sbjct: 239 DYIHVVDLAKGHIAALKKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 297
Query: 342 RRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGS 390
RR GD A Y++PS +EL WTA L + WRWQK + +G G+
Sbjct: 298 RREGDVAACYANPSLAHEELGWTAAL-GLDRMCEDLWRWQKQNPSGLGA 345
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 121/356 (33%), Positives = 186/356 (52%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VL+TGG GYIGS +L LL++ Y V IVDNL + A+ ++ + + + F D+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGK--RPAFHNVDIT 63
Query: 112 DAKAVNKIF-AENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D A++K+F A D+V+HFAA+ VGES PL YY ++ +L +M H V +
Sbjct: 64 DEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCNI 123
Query: 171 IYSSTCATYGE----PDKMPITESTPQKPINPYGKAKKMSEDIIIDF--SKTTNMAVM-- 222
++SS+ YG+ P+ +PI E P P N YG+ K ED+I D ++ N+
Sbjct: 124 VFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDVISDHVNAQRNNLKKADK 183
Query: 223 --------ILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDY 274
+LRYFN G+ P G +GE P + G A G L + G DY
Sbjct: 184 PFDMWNGALLRYFNPCGAHPSGLMGEDPQGVPFNLLPLLG---QVATGQREKLLVFGDDY 240
Query: 275 NTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGI--YNVGTGKGRSVKEFVEACKKATG 332
++ DGT +RDYI V DL H+ AL + K G+ +N+G+G+G +V E ++A G
Sbjct: 241 SSRDGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVG 300
Query: 333 VNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
++ E + RR GD ++ ++P+ EL W ++ + Q W+W K + GY
Sbjct: 301 RDLPYEVVPRRQGDVLDLTANPALANKELGWKTELR-MEDACQDLWKWVKNNPQGY 355
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 332 (121.9 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 83/200 (41%), Positives = 111/200 (55%)
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHKV 167
D+ D A+ ++F + +F AV+HFA + VGES +PL YY N+T T+ +LE M AH V
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHGV 60
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDF---SKTTNMAVMI 223
K L++SS+ YG P +P+ E+ P NPYGK+K E++I D KT N AV+
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWN-AVL- 118
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVR 283
LRYFN G+ G +GE P + A G L + G DY+T DGT VR
Sbjct: 119 LRYFNPTGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 175
Query: 284 DYIDVTDLVDAHVLALANAK 303
DYI V DL H+ AL K
Sbjct: 176 DYIHVVDLAKGHIAALRKLK 195
Score = 86 (35.3 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 309 IYNVGTGKGR--SVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTA 365
I+ V KG ++++ E C G I + ++RR GD A Y++PS ++EL WTA
Sbjct: 178 IHVVDLAKGHIAALRKLKEQC----GCRIPYKVVARREGDVAACYANPSLAQEELGWTA 232
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 98/231 (42%), Positives = 132/231 (57%)
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHKV 167
D+ D A+ ++F + +F AV+HFA + VGES +PL YY N+T T+ +LE M AH V
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHGV 60
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDF---SKTTNMAVMI 223
K L++SS+ YG P +P+ E+ P NPYGK+K E++I D KT N AV+
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWN-AVL- 118
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVR 283
LRYFN G+ G +GE P + A G L + G DY+T DGT VR
Sbjct: 119 LRYFNPTGAHASGCIGEDPQGI---PNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 175
Query: 284 DYIDVTDLVDAHVLALANAKPGKVG--IYNVGTGKGRSVKEFVEACKKATG 332
DYI V DL H+ AL K + G IYN+GTG G SV + V+A +KA+G
Sbjct: 176 DYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASG 225
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 282 (104.3 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 100/323 (30%), Positives = 141/323 (43%)
Query: 65 AALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFI-YADLGDA-KAVNKIFAE 122
AALR L D Y+V SR K+ G + F Y + ++ K K +A
Sbjct: 119 AALRQLLDQYQVD-----SRWGTPKSKI-------SGVIHFAAYKAVEESIKNPLKYYAN 166
Query: 123 NAFDAVMHFAAVAYVGESTL---EPLRYYHNITSNTLVILEAMAAHKVKTLIYSSTCATY 179
N + + + G T Y + ++ L + E + AHK + Y
Sbjct: 167 NVSGLIDFASTLGKYGIKTFIFSSSATVYGTLATSGLPLKEELCAHKDEI---------Y 217
Query: 180 GEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDFSKTT-NMAVMILRYFNVIGSDPEGR 237
+ D + T I NPYG+ K M E I+ D + + ++ LRYFN IG D G
Sbjct: 218 HDADGVAQTIRAGSTGITNPYGRTKWMCEAILADLAASDPEWTIVALRYFNPIGCDESGL 277
Query: 238 LGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVL 297
LGE P + + G L + GTD+ T DGT VRD+I VTDL H+
Sbjct: 278 LGEDPK---QTPTNLLPVVVKVMTGEYNELSMFGTDWETEDGTAVRDFIHVTDLARGHIA 334
Query: 298 ALANAKPGKVG----IYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSD 353
AL A K+ +N+GTG+G SVKE V+A + + I V RRPGD +
Sbjct: 335 ALDAANERKLAENFRAFNLGTGRGHSVKEVVDAMESVSRKQIPVRAAPRRPGDVGSCVAV 394
Query: 354 PSKIRDELNWTAR--FTDLQGSL 374
++ + EL W TD GSL
Sbjct: 395 ATRSQQELRWKTEKSLTDACGSL 417
Score = 118 (46.6 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 44 RHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS 83
R+ P ++LVTGG G+IGSH L LLK SY V ++DNLS
Sbjct: 41 RNFPLRQYILVTGGLGFIGSHTTLELLKASYNVVVIDNLS 80
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 109/358 (30%), Positives = 159/358 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQL-QFIYADL 110
VLVTGG GYIGS L LL+ Y+V + DNL + A+ ++ + + + Q D
Sbjct: 6 VLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTDE 65
Query: 111 GDAKAVNKIFAE-NAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
V + + ++ AV GE L+ Y+ N+ ++ + +
Sbjct: 66 AAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLD--YYHVNVYGTICLLRSMVRHNVTNI 123
Query: 170 LIYSSTCATYGE---PDKMPITESTPQKPINPYGKAKKMSEDIIIDF-----------SK 215
+ SS PD +PI E P P NPYG K E I D
Sbjct: 124 VFSSSATVYGDATRFPDMIPIPEHCPLGPTNPYGNTKFAIELAITDVINAQRNNAKKAGN 183
Query: 216 TTNMAVM---ILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGT 272
T A +LRYFN G+ P G +GE P + A G L + G
Sbjct: 184 ETEAAKWNGALLRYFNPAGAHPSGIMGEDPQGVPYN---LLPLLAQVATGKREKLLVFGD 240
Query: 273 DYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGI--YNVGTGKGRSVKEFVEACKKA 330
DY + DGT +RDYI + DL D H+ AL + G+ +N+GTG+G +V E + A KA
Sbjct: 241 DYASHDGTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKA 300
Query: 331 TGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
G ++ E RR GD + S+P++ EL W A+ T L+ + + W W K + GY
Sbjct: 301 VGRDLPYEVAPRRAGDVLNLTSNPTRANTELGWKAQRT-LEQACEDLWLWTKNNPQGY 357
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 82/194 (42%), Positives = 114/194 (58%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ ++F + +F AV+HFA + VGES +PL YY N+T T+ +LE M AH
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDF---SKTTNMAVM 222
VK L++SS+ YG P +P+ E+ P NPYGK+K E++I D KT N AV+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWN-AVL 182
Query: 223 ILRYFNVIGSDPEG 236
LRYFN G+ G
Sbjct: 183 -LRYFNPTGAHASG 195
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 81/190 (42%), Positives = 113/190 (59%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLS---RGNMGAVKVLQELFPQPGQ-LQFIY 107
VLVTGGAGYIGSH L LL+ Y ++DN RG + L+ + G+ ++F
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
D+ D A+ ++F + +F AV+HFA + VGES +PL YY N+T T+ +LE M AH
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTG-TIQLLEIMKAHG 123
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPI-NPYGKAKKMSEDIIIDF---SKTTNMAVM 222
VK L++SS+ YG P +P+ E+ P NPYGK+K E++I D KT N AV+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWN-AVL 182
Query: 223 ILRYFNVIGS 232
LRYFN G+
Sbjct: 183 -LRYFNPTGA 191
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 223 (83.6 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 58/180 (32%), Positives = 90/180 (50%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
+VTGGAG+IGSH LL ++V ++DNL G+ + L+ P L F D+ +
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHR---RNLEHRANNP-DLTFEIKDICE 62
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIY 172
A + +F EN D V HFA + + S P+ Y T+ +LE A VK L+Y
Sbjct: 63 LSAPHPLF-ENV-DYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVY 120
Query: 173 SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGS 232
+++ + YG D +P E P P PY +K + E+ + + + V +R FN G+
Sbjct: 121 AASSSCYGLAD-VPTREDHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNAYGT 179
Score = 130 (50.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 45/148 (30%), Positives = 70/148 (47%)
Query: 226 YFNVIGSDPEG-RLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTA-DGTCVR 283
+F V G R+ A +R G + GA F G+ K+ + DGT R
Sbjct: 160 WFQVYGLPVNSIRIFNAYGTRVRTTG-VYGAVF----GVFFKQKLADKPFTVVGDGTQRR 214
Query: 284 DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRR 343
D++ VTD+ A + A K G+ +N+G G +S+ VE + +VEY+ +R
Sbjct: 215 DFLYVTDVARAFLKAAETRKVGET--WNLGAGNPQSINRLVEL------IGGEVEYIPKR 266
Query: 344 PGDYAEVYSDPSKIRDELNW--TARFTD 369
PG+ ++D SKI+ +L W T F D
Sbjct: 267 PGEPDCTWADISKIKRDLGWEPTITFAD 294
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 94/335 (28%), Positives = 154/335 (45%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
LVTG AG+IGS RL + V +DN++ A+K + + FI D+ D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIY 172
+ ++F FD V+H AA A V S P+ Y + L +LE ++VK LIY
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLIY 123
Query: 173 SSTCATYGEPDKMPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIG 231
+S+ + YG +K+P T+ T P++ Y KK +E + +S N+ LR+F V G
Sbjct: 124 ASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVYG 183
Query: 232 SDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDL 291
S GR AP+ ++ ++G D G R D+ D V I + D+
Sbjct: 184 S--WGRPDMAPYIFTKKI--LNGDTIDINNN---GDMWR--DFTHVDDI-VEGVIRIADV 233
Query: 292 V---DAHVLALANAKPGK----VGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRP 344
+ DA + + P +YN+G G S+ +FV+A + G+ K + +P
Sbjct: 234 IPERDAE-WKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP 292
Query: 345 GDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAW 378
GD + Y+D + N+ + + +G + + W
Sbjct: 293 GDVYQTYADTQDLFKATNYVPKISVKEGVAELVVW 327
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 94/335 (28%), Positives = 154/335 (45%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
LVTG AG+IGS RL + V +DN++ A+K + + FI D+ D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIY 172
+ ++F FD V+H AA A V S P+ Y + L +LE ++VK LIY
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKHLIY 123
Query: 173 SSTCATYGEPDKMPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIG 231
+S+ + YG +K+P T+ T P++ Y KK +E + +S N+ LR+F V G
Sbjct: 124 ASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVYG 183
Query: 232 SDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDL 291
S GR AP+ ++ ++G D G R D+ D V I + D+
Sbjct: 184 S--WGRPDMAPYIFTKKI--LNGDTIDINNN---GDMWR--DFTHVDDI-VEGVIRIADV 233
Query: 292 V---DAHVLALANAKPGK----VGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRP 344
+ DA + + P +YN+G G S+ +FV+A + G+ K + +P
Sbjct: 234 IPERDAE-WKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP 292
Query: 345 GDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAW 378
GD + Y+D + N+ + + +G + + W
Sbjct: 293 GDVYQTYADTQDLFKATNYVPKISVKEGVAELVVW 327
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 94/316 (29%), Positives = 147/316 (46%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPG--QLQFIYADL 110
LVTG AG+IG++ + RL + V +DNL+ A+K L L P FI DL
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALK-LARLAPLEALSNFHFIKLDL 62
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D + + K+FA+ F V+H AA A V S PL Y + L ILE HK++ L
Sbjct: 63 ADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHL 122
Query: 171 IYSSTCATYGEPDKMPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
+Y+S+ + YG KMP TE + PI+ Y KK +E + +S + LR+F V
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYN--TADGTCVRDYID 287
G P GR P++ A F + I+ G I ++ + D T + D ++
Sbjct: 183 YG--PWGR------PDM--------ALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVE 226
Query: 288 ----VTDLVDAHV--LALANAKPGKVG----IYNVGTGKGRSVKEFVEACKKATGVNIKV 337
V D + + P ++N+G G + +F+ A ++A G+ K
Sbjct: 227 GIIRVQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKK 286
Query: 338 EYLSRRPGDYAEVYSD 353
++L +PGD ++D
Sbjct: 287 QFLPMQPGDVHATWAD 302
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 94/316 (29%), Positives = 147/316 (46%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPG--QLQFIYADL 110
LVTG AG+IG++ + RL + V +DNL+ A+K L L P FI DL
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALK-LARLAPLEALSNFHFIKLDL 62
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D + + K+FA+ F V+H AA A V S PL Y + L ILE HK++ L
Sbjct: 63 ADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEHL 122
Query: 171 IYSSTCATYGEPDKMPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
+Y+S+ + YG KMP TE + PI+ Y KK +E + +S + LR+F V
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYN--TADGTCVRDYID 287
G P GR P++ A F + I+ G I ++ + D T + D ++
Sbjct: 183 YG--PWGR------PDM--------ALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVE 226
Query: 288 ----VTDLVDAHV--LALANAKPGKVG----IYNVGTGKGRSVKEFVEACKKATGVNIKV 337
V D + + P ++N+G G + +F+ A ++A G+ K
Sbjct: 227 GIIRVQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKK 286
Query: 338 EYLSRRPGDYAEVYSD 353
++L +PGD ++D
Sbjct: 287 QFLPMQPGDVHATWAD 302
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 221 (82.9 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 56/181 (30%), Positives = 99/181 (54%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTGGAG+IGS A +R + + IVD L+ G ++ ++E+ +++F AD+
Sbjct: 3 ILVTGGAGFIGS-AFVRKYAYDHELIIVDKLTYA--GDLRRIEEV---RDRIKFYKADVA 56
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D A+ +IF + +AV+HFAA ++V S +P + T V+L+A + ++ +
Sbjct: 57 DKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFV 116
Query: 172 YSSTCATYGEPDKM-PITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVI 230
+ ST YGE K TE +P +P +PY +K ++ + + +T + V++ R N
Sbjct: 117 HISTDEVYGELGKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARPCNNY 176
Query: 231 G 231
G
Sbjct: 177 G 177
Score = 100 (40.3 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV-NIKV 337
G VR+++ V D ++A L L KPG+ YN+G+G+ + E V+ + G +
Sbjct: 205 GLNVREWLYVDDCIEAVYLLLQKGKPGEA--YNIGSGEEKGNIEVVKEILRILGKPESLI 262
Query: 338 EYLSRRPG-DYAEVYS-DPSKIRDELNWTARFTDLQGSLQIAWRWQKTH 384
++ RPG D+ YS + KI+ W + +G ++ W K H
Sbjct: 263 TFVEDRPGHDFR--YSLNSKKIKMNYAWKHKVNFNEG-IRFVIDWYKKH 308
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 223 (83.6 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 61/182 (33%), Positives = 93/182 (51%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGG G+IGSH LL ++V ++DNLS G++ +K Q +L+ I +L
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQR-----DKLEIINGNLT 58
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D ++ A + V H AA A V S + N T T +LEAM ++V L+
Sbjct: 59 DKFLLDS--AVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLV 116
Query: 172 YSSTCATYGEPDKMPITEST-PQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVI 230
++S+ A YGE + E P PI+ YG +K E +I +S + + R+ N++
Sbjct: 117 FASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANIV 176
Query: 231 GS 232
GS
Sbjct: 177 GS 178
Score = 87 (35.7 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIK- 336
DG+ + Y+ V+D V +L + +G+YN+GT +V++ AC A+ + +K
Sbjct: 204 DGSQSKPYLHVSDCVAGMLLGFEKSTKN-LGLYNLGTPDSVAVRDI--ACLVASEMGLKN 260
Query: 337 VEYL---SRR--PGDYAEVYSDPSKIRDELNWTARFTDLQ 371
V Y R GD +V D S+IR L + +FT LQ
Sbjct: 261 VCYSYSGGERGWQGDAPQVRFDISRIRT-LGFKPKFTSLQ 299
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 96/340 (28%), Positives = 150/340 (44%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP--QPGQLQFIYADL 110
L+TG AG+IGS+ +LLK + V +DN + G + +Q L Q + FI D+
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHKVKT 169
D + N D V+H AA+ V S +P+ NIT L +L+A +VK+
Sbjct: 79 RDYAICEAVV--NGVDYVLHQAALGSVPRSIADPITTNAANITG-FLNMLQAAKEAEVKS 135
Query: 170 LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
Y+++ +TYG+ +P E P++PY K ++E +++T + LRYFNV
Sbjct: 136 FTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFNV 195
Query: 230 IG--SDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYID 287
G DP G A P+ +I G + + DG RD+
Sbjct: 196 FGRRQDPNGAYA-AVIPKWTS-------------SMIKGEDV----FINGDGETSRDFCY 237
Query: 288 VTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACK---KATGVNIKVE--YLSR 342
+ ++V ++LA A K +YNV G ++ + A K A G+N+ Y
Sbjct: 238 IDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDF 297
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQK 382
R GD +D SK L + L+G + A W K
Sbjct: 298 RAGDVRHSQADVSKAVTRLGYQYTHKILEG-ISEAMPWYK 336
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 96/340 (28%), Positives = 150/340 (44%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP--QPGQLQFIYADL 110
L+TG AG+IGS+ +LLK + V +DN + G + +Q L Q + FI D+
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHKVKT 169
D + N D V+H AA+ V S +P+ NIT L +L+A +VK+
Sbjct: 79 RDYAICEAVV--NGVDYVLHQAALGSVPRSIADPITTNAANITG-FLNMLQAAKEAEVKS 135
Query: 170 LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
Y+++ +TYG+ +P E P++PY K ++E +++T + LRYFNV
Sbjct: 136 FTYAASSSTYGDHPALPKVEQNIGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFNV 195
Query: 230 IG--SDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYID 287
G DP G A P+ +I G + + DG RD+
Sbjct: 196 FGRRQDPNGAYA-AVIPKWTS-------------SMIKGEDV----FINGDGETSRDFCY 237
Query: 288 VTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACK---KATGVNIKVE--YLSR 342
+ ++V ++LA A K +YNV G ++ + A K A G+N+ Y
Sbjct: 238 IDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDF 297
Query: 343 RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQK 382
R GD +D SK L + L+G + A W K
Sbjct: 298 RAGDVRHSQADVSKAVTRLGYQYTHKILEG-ISEAMPWYK 336
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 205 (77.2 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 53/185 (28%), Positives = 95/185 (51%)
Query: 51 HVLVTGGAGYIGSHAALRLLK--DSYRVTIVDNLS-RGNMGAVKVLQELFPQPGQLQFIY 107
++LVTGGAG+IGS+ +L+ ++Y++ D L+ GN+ VK +Q+ P F+
Sbjct: 2 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQD---HPNYY-FVK 57
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKV 167
++ + + + + E +++FAA ++V S P+ +Y T+ +LE + +
Sbjct: 58 GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 117
Query: 168 KTLIYSSTCATYGEPDKMP-ITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRY 226
L+ ST YG K TE TP P +PY +K ++ I + + KT + V++ R
Sbjct: 118 IKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRC 177
Query: 227 FNVIG 231
N G
Sbjct: 178 SNNYG 182
Score = 114 (45.2 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIK- 336
DG VRD++ VTD A + L + G+V YN+G ++ E VE G K
Sbjct: 209 DGLNVRDWLHVTDHCSAIDVVLHKGRVGEV--YNIGGNNEKTNVEVVEQIITLLGKTKKD 266
Query: 337 VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+EY++ R G + K+++E +W ++T QG LQ +W
Sbjct: 267 IEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQG-LQETVQW 309
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 224 (83.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 63/201 (31%), Positives = 99/201 (49%)
Query: 36 SNSTKAFPRHEPG--VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVK 91
+ + +A P P VLVTGGAG+I SH + L++D +Y + +D L ++K
Sbjct: 2 TTAVRAEPLGPPNSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDY--CASLK 59
Query: 92 VLQELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY-YHN 150
L+ + + +FI D+ D+ V +F D V+HFAA +V S + + Y N
Sbjct: 60 NLETISDKQNY-KFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVN 118
Query: 151 ITSNTLVILEAMAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDII 210
+ T V+L A +V+ IY ST YG ES+P++P NPY +K +E +
Sbjct: 119 VYG-THVLLSAAHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFV 177
Query: 211 IDFSKTTNMAVMILRYFNVIG 231
+ + V+I R NV G
Sbjct: 178 QSYWERYKFPVVITRSSNVYG 198
Score = 92 (37.4 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV----KEFVEACKKATGVN 334
G R+++ TD+V+A + L KPG+ IYN+GT SV KE ++ K+ +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKETKSES 283
Query: 335 IK---VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAWRWQKTH 384
V+Y++ RP + KI L W + +G + I W + H
Sbjct: 284 EMENWVDYVNDRPTNDMRYPMKSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFH 336
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 218 (81.8 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 62/190 (32%), Positives = 93/190 (48%)
Query: 47 PG--VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQ 102
PG VLVTGGAG+I SH + L++D +Y + +D L ++K L E
Sbjct: 13 PGGFAKRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDY--CASLKNL-ETISNKQN 69
Query: 103 LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY-YHNITSNTLVILEA 161
+FI D+ D+ V +F D V+HFAA +V S + + Y N+ T V++ A
Sbjct: 70 YKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVSA 128
Query: 162 MAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
+V+ IY ST YG ES+P++P NPY +K +E + + + V
Sbjct: 129 AHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPV 188
Query: 222 MILRYFNVIG 231
+I R NV G
Sbjct: 189 VITRSSNVYG 198
Score = 93 (37.8 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV----KEFVEACKKATGVN 334
G R+++ TD+V+A + L KPG+ IYN+GT SV KE ++ K+ +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSES 283
Query: 335 IK---VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAWRWQKTH 384
V+Y++ RP + KI L W + +G + I W + H
Sbjct: 284 EMENWVDYVNDRPTNDMRYPMKSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFH 336
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 254 (94.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 93/330 (28%), Positives = 149/330 (45%)
Query: 49 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKV--LQELFPQPGQLQFI 106
++ +LVTG AG+IG H RLL RV +DNL+ +K+ L++L + G F+
Sbjct: 1 MSSILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREG-FSFV 59
Query: 107 YADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHK 166
L D A+ +FA FD V++ AA A V S P Y + + ILE H
Sbjct: 60 RTSLADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHG 119
Query: 167 VKTLIYSSTCATYGEPDKMPIT-ESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
VK L+Y+S+ + YG MP + P++ Y KK +E + +S + LR
Sbjct: 120 VKHLVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLR 179
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTA--DGTCVR 283
+F V G P GR P++ A F + I+ G I ++ D T V
Sbjct: 180 FFTVYG--PWGR------PDM--------ALFLFTKAILEGRPIDVYNFGKMQRDFTYVD 223
Query: 284 DYID-VTDLVDAHVL---ALANAKP------GKVGIYNVGTGKGRSVKEFVEACKKATGV 333
D ++ VT ++D A + A+P IYN+G + F+EA ++ G+
Sbjct: 224 DIVEGVTRVMDRTPEPNPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGI 283
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNW 363
+ L + GD Y+D + +++ +
Sbjct: 284 TAQKNLLPLQAGDVPATYADVDDLMNDVGF 313
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 217 (81.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 60/183 (32%), Positives = 91/183 (49%)
Query: 52 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYAD 109
VLVTGGAG+I SH + L++D +Y + +D L ++K L E +FI D
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDY--CASLKNL-ETISNKQNYKFIQGD 76
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY-YHNITSNTLVILEAMAAHKVK 168
+ D+ V +F D V+HFAA +V S + + Y N+ T V++ A +V+
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVSAAHEARVE 135
Query: 169 TLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
IY ST YG ES+P++P NPY +K +E + + + V+I R N
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSN 195
Query: 229 VIG 231
V G
Sbjct: 196 VYG 198
Score = 92 (37.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV----KEFVEACKKATGVN 334
G R+++ TD+V+A + L KPG+ IYN+GT SV KE ++ K+ +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKETNSES 283
Query: 335 IK---VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAWRWQKTH 384
V+Y+ RP + KI L W + +G + I W + H
Sbjct: 284 EMENWVDYVDDRPTNDMRYPMKSEKIHG-LGWRPKVPWKEGIKKTIEWYRENFH 336
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 253 (94.1 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 98/346 (28%), Positives = 154/346 (44%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQ-ELFPQPGQ-LQFIYADL 110
L+TG AG+IGS+ LL + +V +DN + G+ +Q ++ + Q F+ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 111 GDAKAVNKIFA--ENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHKV 167
+ + ++ D ++H AA+ V S +PL NIT L +L A +V
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITG-FLTMLTAAKETQV 137
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYF 227
K+ +Y+++ +TYG+ +P E KP++PY K ++E F KT + LRYF
Sbjct: 138 KSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLRYF 197
Query: 228 NVIGS--DPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
NV G DP+G A P+ + A L I G DG RD+
Sbjct: 198 NVFGKRQDPDGAYA-AVIPK-----------WTVAMIANEELLING------DGETSRDF 239
Query: 286 IDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACK---KATGVNIKVE--YL 340
V + V A++LA GK +YNV G S+ + K +A GV+ + Y
Sbjct: 240 CFVENAVQANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQ 299
Query: 341 SRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHIN 386
R GD +D SK + + + F QG + A W +N
Sbjct: 300 DFRAGDVRHSQADISKAKSLIGFEPEFKIQQG-IDKAMPWYIKFLN 344
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 253 (94.1 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 98/346 (28%), Positives = 154/346 (44%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQ-ELFPQPGQ-LQFIYADL 110
L+TG AG+IGS+ LL + +V +DN + G+ +Q ++ + Q F+ D+
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 111 GDAKAVNKIFA--ENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHKV 167
+ + ++ D ++H AA+ V S +PL NIT L +L A +V
Sbjct: 79 RQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITG-FLTMLTAAKETQV 137
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYF 227
K+ +Y+++ +TYG+ +P E KP++PY K ++E F KT + LRYF
Sbjct: 138 KSFVYAASSSTYGDHPALPKVEDAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLRYF 197
Query: 228 NVIGS--DPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
NV G DP+G A P+ + A L I G DG RD+
Sbjct: 198 NVFGKRQDPDGAYA-AVIPK-----------WTVAMIANEELLING------DGETSRDF 239
Query: 286 IDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACK---KATGVNIKVE--YL 340
V + V A++LA GK +YNV G S+ + K +A GV+ + Y
Sbjct: 240 CFVENAVQANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQ 299
Query: 341 SRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHIN 386
R GD +D SK + + + F QG + A W +N
Sbjct: 300 DFRAGDVRHSQADISKAKSLIGFEPEFKIQQG-IDKAMPWYIKFLN 344
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 221 (82.9 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 60/190 (31%), Positives = 96/190 (50%)
Query: 47 PG--VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQ 102
PG VLVTGGAG+I SH + L++D +Y + +D L ++K L+ + +
Sbjct: 13 PGSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDY--CASLKNLEPVSNKQNY 70
Query: 103 LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY-YHNITSNTLVILEA 161
+FI D+ D+ V ++F D V+HFAA +V S + + Y N+ +++ A
Sbjct: 71 -KFIQGDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTA 129
Query: 162 MAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
A +V+ IY ST YG ES+P++P NPY +K +E + + + V
Sbjct: 130 YEA-RVEKFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188
Query: 222 MILRYFNVIG 231
+I R NV G
Sbjct: 189 VITRSSNVYG 198
Score = 84 (34.6 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV----KEFVEACKKATGVNIK-- 336
R+++ D+V+A + L +PG+ IYN+GT SV KE ++ K+ +
Sbjct: 230 RNFLYAADVVEAFLTVLTKGEPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSDSETER 287
Query: 337 -VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAWRWQKTH 384
V+Y+S RP + KI L W + +G + + W + H
Sbjct: 288 WVDYVSDRPHNDMRYPMKSEKIHS-LGWKPKVPWEEGIKKTVEWYRENFH 336
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 266 (98.7 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 104/365 (28%), Positives = 167/365 (45%)
Query: 45 HEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVK-VLQELFPQPGQL 103
H G VLVTG G++GSH +L L K V +DN + ++K + L G +
Sbjct: 83 HRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRG-I 141
Query: 104 QFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILE-AM 162
+ DL DAK + K+F AF VMH AA A V + P Y H+ + + +LE
Sbjct: 142 FVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICK 201
Query: 163 AAHKVKTLIYSSTCATYGEPDKMPITEST-PQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
AA+ ++++S+ + YG +K+P +ES +P + Y KK E+I ++ +A+
Sbjct: 202 AANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHTYNHIYGLAI 261
Query: 222 MILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKI---RGTDYNTAD 278
LR+F V G P GR P++ A F R I+ G I RG N D
Sbjct: 262 TGLRFFTVYG--PWGR------PDM--------AYFSFTRNILQGKPITIYRGK--NRVD 303
Query: 279 GTCVRDYIDVTDLVDAHVLALANA--KPGKVG---------IYNVGTGKGRSVKEFVEAC 327
RD+ + D+V + +L ++ G G I+N+G +V V+
Sbjct: 304 --LARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDIL 361
Query: 328 KKATGVNIKVEYLSRRP-GDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHIN 386
+K V K ++ GD +++ S R+E + TDL+ L+ RW ++
Sbjct: 362 EKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPT-TDLETGLKKFVRWYLSYY- 419
Query: 387 GYGSR 391
GY ++
Sbjct: 420 GYNTK 424
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 210 (79.0 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 61/201 (30%), Positives = 97/201 (48%)
Query: 36 SNSTKAFPRHEPG--VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVK 91
S++ +A P P +LVTGGAG+I SH + L++D +Y + +D L ++K
Sbjct: 2 SSAGRAEPLGPPSSFAKRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDY--CASLK 59
Query: 92 VLQELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY-YHN 150
L E +FI D+ ++ V +F D V+HFAA +V S + + Y N
Sbjct: 60 NL-ETISNKQNYKFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVN 118
Query: 151 ITSNTLVILEAMAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDII 210
+ T V++ A +V+ IY ST YG ES+P++P NPY +K +E +
Sbjct: 119 VYG-THVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFV 177
Query: 211 IDFSKTTNMAVMILRYFNVIG 231
+ + +I R NV G
Sbjct: 178 QSYWERYKFPAVITRSSNVYG 198
Score = 96 (38.9 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV----KEFVEACKKATG-- 332
G R+++ TD+V+A + L KPG+ IYN+GT SV KE ++ K+ +
Sbjct: 226 GLQTRNFLYATDVVEAFLTVLKKGKPGE--IYNIGTNFEMSVLQLAKELIQLIKETSSES 283
Query: 333 -VNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAWRWQKTH 384
+ V+Y++ RP + KI+ L W + +G + I W + H
Sbjct: 284 EMETWVDYVNDRPTNDMRYPMKSEKIQG-LGWRPKVPWKEGIKKTIDWYRENFH 336
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 211 (79.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 57/190 (30%), Positives = 92/190 (48%)
Query: 43 PRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQ 102
PR E +LVTGGAG+I SH + L+++ Y ++ NL + + A E +
Sbjct: 19 PRFEK---RLLVTGGAGFIASHVVVSLVRN-YPNYLIINLDKLDYCASLKNLETVSEKEN 74
Query: 103 LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY-YHNITSNTLVILEA 161
+FI D+ + + ++F D V+HFAA +V S L + Y N+ +++ A
Sbjct: 75 YKFIQGDICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAA 134
Query: 162 MAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
A+ V+ +Y ST YG ES+P+ P NPY +K +E + + + V
Sbjct: 135 HEAN-VEKFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPV 193
Query: 222 MILRYFNVIG 231
+I R NV G
Sbjct: 194 VITRSSNVYG 203
Score = 91 (37.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV----KEFVEACKKATGVNIK-- 336
R+++ TD+V+A + L KPG+ IYN+GT S+ KE + KK + +
Sbjct: 235 RNFLYATDVVEAFLTVLKEGKPGE--IYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEH 292
Query: 337 -VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGY 388
++Y+ RP + Y S+ L W + +G ++ W K + + +
Sbjct: 293 WMDYVKDRPTNDLR-YPMSSEKMHNLGWRPKVPWKEG-IKKTIEWYKENFHNW 343
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 213 (80.0 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 51 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
++L+TG AG+I SH A RL+++ Y++ ++D L +K L F P +F+
Sbjct: 10 NILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY--CSDLKNLDPSFSSPN-FKFVKG 66
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAM-AAHKV 167
D+ VN + D +MHFAA +V S + N T V+LEA ++
Sbjct: 67 DIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 126
Query: 168 KTLIYSSTCATYGEPDKMPIT---ESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
+ I+ ST YGE D+ E++ P NPY K +E +++ + ++ + V+
Sbjct: 127 RRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 225 RYFNVIGSD--PE 235
R NV G + PE
Sbjct: 187 RGNNVYGPNQFPE 199
Score = 100 (40.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVG-IYNVGTGKGRSVKEFV-EACKK-ATGVN 334
DG+ VR Y+ D+ +A + L G++G +YNVGT + R V + + CK
Sbjct: 220 DGSNVRSYLYCEDVAEAFEVVLHK---GEIGHVYNVGTKRERRVIDVARDICKLFGKDPE 276
Query: 335 IKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYG 389
++++ RP + + D K++ +L W R T+ + L+ W + +G
Sbjct: 277 SSIQFVENRPFNDQRYFLDDQKLK-KLGWQER-TNWEDGLKKTMDWYTQNPEWWG 329
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 208 (78.3 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 57/193 (29%), Positives = 93/193 (48%)
Query: 51 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
++L+TG AG+I SH A RL++ Y++ ++D L +K L P +F+
Sbjct: 8 NILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDY--CSNLKNLNPSKSSPN-FKFVKG 64
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAM-AAHKV 167
D+ A VN + D +MHFAA +V S + N T V+LEA ++
Sbjct: 65 DIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 168 KTLIYSSTCATYGEPDKMPIT---ESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
+ I+ ST YGE D+ E++ P NPY K +E +++ + ++ + V+
Sbjct: 125 RRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 225 RYFNVIGSD--PE 235
R NV G + PE
Sbjct: 185 RGNNVYGPNQFPE 197
Score = 105 (42.0 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVG-IYNVGTGKGRSVKEFVEACKKATGVN-- 334
DG+ VR Y+ D+ +A + L G+V +YN+GT + R V + K G++
Sbjct: 218 DGSNVRSYLYCEDVAEAFEVVLHK---GEVNHVYNIGTTRERRVIDVANDISKLFGIDPD 274
Query: 335 IKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYG 389
++Y+ RP + + D K++ +L W R T+ + L+ W + +G
Sbjct: 275 STIQYVENRPFNDQRYFLDDQKLK-KLGWCER-TNWEEGLRKTMEWYTENPEWWG 327
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 199 (75.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 57/187 (30%), Positives = 88/187 (47%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSY-------RVTIVDNLSRGNMGAVKVLQELFPQPGQLQ 104
+LVTGGAG+IGSH L+ +VT+VD L G G ++ L E P +
Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYG--GNLRNLAEASADP-RFS 59
Query: 105 FIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA 164
F+ D+ D + + A + D V HFAA +V S + + + T V+L+A
Sbjct: 60 FVRGDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALR 117
Query: 165 HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
H + ++ ST YG D E P P +PY +K S+ + + + +T M V++
Sbjct: 118 HHIGRFLHVSTDEVYGSIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVT 177
Query: 225 RYFNVIG 231
R N G
Sbjct: 178 RCSNNYG 184
Score = 98 (39.6 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNI-K 336
DG +RD++ V+D LAL + G+V Y++G G + E E +A G +
Sbjct: 211 DGRNIRDWLHVSDHCRGLALALGAGRAGEV--YHIGGGWEATNLELTEILLEACGAPASR 268
Query: 337 VEYLSRRPGDYAEVYSDPSKIRDELNWTAR--FTDLQGSLQ-IAW 378
+ +++ R G D SKI EL + R FTD G + +AW
Sbjct: 269 ISFVTDRKGHDRRYSLDYSKIAGELGYRPRVDFTD--GIAETVAW 311
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 213 (80.0 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 47 PG--VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQ 102
PG VLVTGGAG+I SH + L++D Y + +D L ++K L+ + +
Sbjct: 13 PGSFAKRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDY--CASLKNLEPVSNKQNY 70
Query: 103 LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY-YHNITSNTLVILEA 161
+FI D+ D+ V +F D V+HFAA +V S + + Y N+ T V++ A
Sbjct: 71 -KFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVNA 128
Query: 162 MAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
V+ IY ST YG ES+P++P NPY +K +E + + + V
Sbjct: 129 AYEAGVEKFIYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPV 188
Query: 222 MILRYFNVIG 231
+I R NV G
Sbjct: 189 VITRSSNVYG 198
Score = 84 (34.6 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV----KEFVEACKKATGVNIK-- 336
R+++ D+V+A + L +PG+ IYN+GT SV KE ++ K+ +
Sbjct: 230 RNFLYAADVVEAFLTVLTKGEPGE--IYNIGTNFEMSVVQLAKELIQLIKETNSESETES 287
Query: 337 -VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAWRWQKTH 384
V+Y+S RP + KI L W + +G + + W + H
Sbjct: 288 WVDYVSDRPHNDMRYPMKSEKIHS-LGWKPKVPWEEGIKKTVEWYRKNFH 336
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 246 (91.7 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 94/345 (27%), Positives = 147/345 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG---NMGAVKVLQ-ELFPQPGQLQFIYA 108
LVTG AG+IG H RLL + +DNL+ N+ ++ Q + FP F
Sbjct: 9 LVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPH---FSFHKL 65
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
DL D + + +F ++ FD V+H AA A V S P Y + ILE VK
Sbjct: 66 DLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVK 125
Query: 169 TLIYSSTCATYGEPDKMPITES-TPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYF 227
L+++S+ + YG +K P +ES PI Y +KK +E + ++ + LR+F
Sbjct: 126 HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLFQLPCTGLRFF 185
Query: 228 NVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYN--TADGTCVRDY 285
V G P GR P++ A F R ++ I ++ + D T + D
Sbjct: 186 TVYG--PWGR------PDM--------ALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDI 229
Query: 286 IDVTDLVDAH------VLALANAKPGKVG----IYNVGTGKGRSVKEFVEACKKATGVNI 335
+D L H + P K IYN+G+ + F+ +K
Sbjct: 230 VDGILLTLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKA 289
Query: 336 KVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+L +PGD E Y+D S++ + + R T LQ ++ W
Sbjct: 290 IKNFLPLQPGDVPETYADVSQLEKDFQYRPR-TPLQKGVKNFVEW 333
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 185 (70.2 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 57/180 (31%), Positives = 82/180 (45%)
Query: 53 LVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+V GGAG IGSH RLL+ D V I DN RG + Q L ++ I D+
Sbjct: 10 VVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRE--NLAQALRDPRTKIYDIGGDIN 67
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+N A D V HFAA+ ++ + P + T +LE A VK L+
Sbjct: 68 QTDILNT--ALKGVDGVFHFAAL-WLLQCYEYPRSAFQTNIQGTFNVLETCVAQGVKRLV 124
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIG 231
+SS+ + YG+ + P+TE+ P YG K E + + + + LRY NV G
Sbjct: 125 FSSSASVYGDALEEPMTEAHPFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLRYMNVYG 184
Score = 112 (44.5 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVG-IYNVGTGKGRSVKEFVEACKKATGVNIK 336
DG+ D++ V D A++ A+ K V YNVGTGK S+ E + +K TG +
Sbjct: 215 DGSQAYDFVYVEDCAAANICAM---KADTVDEYYNVGTGKRTSILELAKEIQKITGTSDN 271
Query: 337 VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHI 385
+++L + P K +++ + A +G LQ W+++HI
Sbjct: 272 IQFLPQGTTFVKNRIGCPKKAAEQIGFKAEVGLTEG-LQRLIEWRRSHI 319
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 224 (83.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 60/183 (32%), Positives = 87/183 (47%)
Query: 52 VLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSR-GNMGAVKVLQELFPQPGQLQFIYA 108
VLVTGGAG+IGSH AL +R+ VDNL N+ ++ +Q FI
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQA----SSSYSFIPG 64
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
D+ D + +F+ D V H AA +V S + P R+ T V++ A V+
Sbjct: 65 DVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQ 124
Query: 169 TLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
IY ST YG+ P E +P++P NPY ++K +E I+ + +I R N
Sbjct: 125 RFIYISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSSN 184
Query: 229 VIG 231
V G
Sbjct: 185 VYG 187
Score = 63 (27.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
R ++ V+D+ DA + + G+ IYN+GTG + + + T ++ E L
Sbjct: 219 RHFLYVSDVTDAFLTVMEKGILGE--IYNIGTGFEIPIIQLARELVQMTVKSVSAESLD- 275
Query: 343 RPGDYAEVYSD-P-SKIRDELNWTARFTDLQGSLQIAW 378
D+ E D P +++R +N + + L ++AW
Sbjct: 276 ---DWLEFVEDRPVTELRYPMN-SVKLHRLGWRPKVAW 309
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 201 (75.8 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 57/166 (34%), Positives = 91/166 (54%)
Query: 52 VLVTGGAGYIGS---HAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
+LVTGGAG+IG+ H ALR + S +T++D L+ G+ + L P +++ +
Sbjct: 3 LLVTGGAGFIGANFVHLALREARTS-SITVLDALTYA--GS---RESLAPVADRIRLVQG 56
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
D+ DA V + AE+ DAV+HFAA +V + +P + H+ T ILEA+ H V+
Sbjct: 57 DITDAALVGDLVAES--DAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVR 114
Query: 169 TLIYSSTCATYGEPD-KMP--ITESTPQKPINPYGKAKKMSEDIII 211
L + ST YG+ + P E+TP P +PY K + D+++
Sbjct: 115 -LHHVSTDEVYGDLELDNPARFNETTPYNPSSPYSSTKAAA-DLLV 158
Score = 85 (35.0 bits), Expect = 4.7e-19, Sum P(2) = 4.7e-19
Identities = 28/107 (26%), Positives = 45/107 (42%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIK-V 337
G VRD+I V D A L + G+ Y +G R+ + K G +
Sbjct: 207 GANVRDWIHVDDHNSAVWRILTDGTIGRT--YLIGAECERNNLTVMRTILKLMGRDPDDF 264
Query: 338 EYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTH 384
++++ R G DPS ++DEL W + TD + L W + +
Sbjct: 265 DHVTDRAGHDLRYAIDPSTLQDELGWAPKHTDFEAGLTDTIDWYRAN 311
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 200 (75.5 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 55/188 (29%), Positives = 90/188 (47%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNM-GAVKVLQELFPQPGQLQFIYAD 109
++LVTG G+IGSH L+K ++V + + N G + E P ++ + D
Sbjct: 3 NILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHL----EKSPFLKDMEVVSGD 58
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
L D+ KI +N DA+ H A+ + S P Y + TL +LEA +++
Sbjct: 59 LRDSFFCEKI-TKN-IDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISH 116
Query: 170 LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
I++ST YG +PI E P +P +PY +K ++ + + + + N+ V I R FN
Sbjct: 117 FIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNT 176
Query: 230 IGSDPEGR 237
G R
Sbjct: 177 YGPRQSAR 184
Score = 85 (35.0 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 259 AARGIIPGLK---IRGT-DYNTADGTCVRDYIDVTDLVDAHVLALANAKP-GKVGIYNVG 313
+AR IIP + + G + D + RD V D + + +L N K G+V YN+G
Sbjct: 182 SARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFI-SLLNLKHFGEV--YNIG 238
Query: 314 TGKGRSVKEFVEACKKATGVNIKV--EYLSRRPGDYAEVYS---DPSKIRDELNWTARFT 368
+G S++E + +K +K+ + RP + +EV+ D +K++ NW ++ +
Sbjct: 239 SGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKN-SEVFRLCCDANKLKKATNWQSKIS 297
Query: 369 DLQGSLQIAWRWQKTHINGYGS 390
L+ L+ + + K ++ Y S
Sbjct: 298 -LEEGLRQSIEYFKENLENYKS 318
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 249 (92.7 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 90/355 (25%), Positives = 164/355 (46%)
Query: 48 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIY 107
G+T VLVTG AG++G+H + L + V +DN + ++K + + + +
Sbjct: 96 GIT-VLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVE 154
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILE-AMAAHK 166
D+ D + + K+F +F VMH AA A V + P Y H+ + + +LE + +
Sbjct: 155 GDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNP 214
Query: 167 VKTLIYSSTCATYGEPDKMPITESTP-QKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
++++S+ + YG K+P +E +P + Y KK E+I ++ +++ LR
Sbjct: 215 QPAIVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLR 274
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTAD-GTCVRD 284
+F V G P GR P++ A F + I+ G I + + +A+ GT RD
Sbjct: 275 FFTVYG--PWGR------PDM--------AYFFFTKDILKGKSI--SIFESANHGTVARD 316
Query: 285 YIDVTDLVDAHVLALANAK-----------PGKVGIYNVGTGKGRSVKEFVEACKKATGV 333
+ + D+V + AL A+ P ++ ++N+G V + V ++ V
Sbjct: 317 FTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKV 376
Query: 334 NIKVEYLSR-RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHING 387
K + R GD +++ S + EL + TDLQ L+ RW ++ +G
Sbjct: 377 KAKKNLIKMPRNGDVPFTHANISLAQRELGYKPT-TDLQTGLKKFVRWYLSYYSG 430
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 177 (67.4 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 57/190 (30%), Positives = 88/190 (46%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
LVTGGAG+IG + L + RV +D L+ G + L L + F+ D+GD
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALTYA--GNLNTLASLEGNADHI-FVKGDIGD 61
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL-- 170
V ++ E+ DAV++FAA ++V S P + TL +LEA+ + K L
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYW-KALPD 120
Query: 171 --------IYSSTCATYGEPDKM-PITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
++ ST YG + TE+TP P +PY +K S+ ++ F T + V
Sbjct: 121 TRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 222 MILRYFNVIG 231
+ N G
Sbjct: 181 LTTNCSNNYG 190
Score = 114 (45.2 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 37/112 (33%), Positives = 54/112 (48%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEA-CK-------K 329
DG VRD++ V+D +A LA + G+ YNVG R E V+A C +
Sbjct: 217 DGKQVRDWLFVSDHCEAIRTVLAKGRVGET--YNVGGNSERQNIEVVQAICALLDQHRPR 274
Query: 330 ATGV--NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQG-SLQIAW 378
G ++ Y++ RPG D SK++DEL W +T QG +L + W
Sbjct: 275 EDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIALTVDW 326
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 239 (89.2 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 92/350 (26%), Positives = 157/350 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTG AG++G+H + L + V +DN + ++K ++ + + + D+
Sbjct: 93 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDIN 152
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAM-AAHKVKTL 170
DA + K+F F VMH AA A V + P Y H+ + + +LE +A+ +
Sbjct: 153 DAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAI 212
Query: 171 IYSSTCATYGEPDKMPITEST-PQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
+++S+ + YG K+P +E +P + Y KK E+I ++ +++ LR+F V
Sbjct: 213 VWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 272
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVT 289
G P GR P++ A F R I+ G I + GT RD+ +
Sbjct: 273 YG--PWGR------PDM--------AYFFFTRDILKGKAISIFE-GVNHGTVARDFTYID 315
Query: 290 DLVDAHVLALANAKP-----GK------VGIYNVGTGKGRSVKEFVEACKKATGVNIKVE 338
D+V + AL A+ GK + ++N+G V + V ++ V K
Sbjct: 316 DIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRN 375
Query: 339 YLSR-RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHING 387
+ R GD +++ S + EL + TDLQ L+ RW + NG
Sbjct: 376 IMKLPRNGDVQFTHANISSAQRELGYKPT-TDLQTGLKKFARWYLGYYNG 424
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 206 (77.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 59/166 (35%), Positives = 93/166 (56%)
Query: 52 VLVTGGAGYIGS---HAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
+LVTGGAG+IG+ H+A+R D VT++D L+ G + L ++ ++ +
Sbjct: 3 LLVTGGAGFIGTNFVHSAVREHPDD-AVTVLDALTYA--GRRESLADV---EDAIRLVQG 56
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
D+ DA+ V+++ AE+ DAV+HFAA ++V + P + H T ILEA+ H V+
Sbjct: 57 DITDAELVSQLVAES--DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVR 114
Query: 169 TLIYSSTCATYGE---PDKMPITESTPQKPINPYGKAKKMSEDIII 211
L + ST YG+ D+ TESTP P +PY A K D+++
Sbjct: 115 -LHHISTDEVYGDLELDDRARFTESTPYNPSSPYS-ATKAGADMLV 158
Score = 65 (27.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 24/104 (23%), Positives = 42/104 (40%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVE 338
G VRD+I V D A L + G+ + + G+ ++ + +
Sbjct: 207 GANVRDWIHVDDHNSAVRRILDRGRIGRTYLIS-SEGERDNLTVLRTLLRLMDRDPDDFD 265
Query: 339 YLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQK 382
+++ R G DPS + DEL W + TD + L+ W +
Sbjct: 266 HVTDRVGHDLRYAIDPSTLYDELCWAPKHTDFEEGLRTTIDWYR 309
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 169 (64.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 56/190 (29%), Positives = 87/190 (45%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
LVTG AG+IG + L + RV +D L+ G + L L + F+ D+GD
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALTYA--GNLNTLASLEGNADHI-FVKGDIGD 61
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL-- 170
V ++ E+ DAV++FAA ++V S P + TL +LEA+ + K L
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYW-KALPD 120
Query: 171 --------IYSSTCATYGEPDKM-PITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
++ ST YG + TE+TP P +PY +K S+ ++ F T + V
Sbjct: 121 TRRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 222 MILRYFNVIG 231
+ N G
Sbjct: 181 LTTNCSNNYG 190
Score = 112 (44.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEA-CK-------K 329
DG VRD++ V+D +A LA + G+ YNVG R E V+A C +
Sbjct: 217 DGKQVRDWLFVSDHCEAIRTVLAKGRVGET--YNVGGNSERQNIEVVQAICALLDQHRPR 274
Query: 330 ATGV--NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAW 378
G ++ Y++ RPG D SK++DEL W +T QG Q + W
Sbjct: 275 EDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQTVDW 326
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 162 (62.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 54/187 (28%), Positives = 90/187 (48%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNL------SRGNMGAVKVLQELFPQPGQLQF 105
V +TGGAG+IGS AL L ++ + + I+D + GN+ + + L G+L
Sbjct: 3 VAITGGAGFIGSQLALNL-QEKHEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL-- 59
Query: 106 IYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH 165
D+ D K + KI + + + H AA++ ++T+ NT ++
Sbjct: 60 FAGDINDEKVLKKI-EDFKPEIIFHQAAIS---DTTVFDQTKVLQTNLNTFKDFIELSID 115
Query: 166 KVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI-L 224
LIY+S+ + YG+ K P T ++P NPY +K M + + K + A ++ L
Sbjct: 116 LNAKLIYASSASVYGDA-KSPQTVGKDEEPKNPYAFSKLMMDKLA---KKYYDKAHLVGL 171
Query: 225 RYFNVIG 231
RYFNV G
Sbjct: 172 RYFNVYG 178
Score = 111 (44.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 23/81 (28%), Positives = 47/81 (58%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
RD+ + D+++A+++AL + K G+YNVG+GK R+ ++ V+ +K ++ EY+
Sbjct: 215 RDFTYIKDVINANLIALDS----KCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYI-- 268
Query: 343 RPGDYAEVYSDPSKIRDELNW 363
P Y + Y ++ + + W
Sbjct: 269 -PNPYVKSYQFHTEAKLDQTW 288
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 228 (85.3 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 94/356 (26%), Positives = 162/356 (45%)
Query: 41 AFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVK-VLQELFPQ 99
A PR G+T VLVTG +G++G+H ++ L + V +DN +R +K Q L +
Sbjct: 88 ARPRSHGGLT-VLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLER 146
Query: 100 PGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVIL 159
G + D+ DA + K+F F VMH AA A V + P Y ++ + + +L
Sbjct: 147 SGVF-VVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLL 205
Query: 160 E-AMAAHKVKTLIYSSTCATYGEPDKMPITEST-PQKPINPYGKAKKMSEDIIIDFSKTT 217
E + +A+ ++++S+ + YG K+P +E +P + Y KK E I ++
Sbjct: 206 EVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHIY 265
Query: 218 NMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTA 277
+++ LR+F V G P GR P++ A F + I+ G I T + +
Sbjct: 266 GLSLTGLRFFTVYG--PWGR------PDM--------AYFFFTKDILKGKTI--TVFESP 307
Query: 278 D-GTCVRDYIDVTDLVDAHVLALANAK-----------PGKVGIYNVGTGKGRSVKEFVE 325
D G+ RD+ + D+V + AL A+ P IYN+G V + V
Sbjct: 308 DKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVT 367
Query: 326 ACKKATGVNIKVEYLSR-RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+K + K + + R GD +++ + + EL + DL+ L+ +W
Sbjct: 368 ILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPA-VDLETGLKKFVKW 422
Score = 41 (19.5 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 17 LVASVLTAVFIFMFSLSPDSNSTK 40
L AS+ A+F+F LSP + ++
Sbjct: 38 LWASLFLALFLFYLVLSPPPSPSR 61
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 220 (82.5 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 97/355 (27%), Positives = 157/355 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVK-VLQELFPQPGQLQFIYADL 110
VLVTG AG++GSH +L L K V DN + ++K QEL + Q+ + DL
Sbjct: 114 VLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQ-QVFIVEGDL 172
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILE-AMAAHKVKT 169
D + K+F F ++H AA A V + P Y + + + +LE A AA+
Sbjct: 173 NDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPA 232
Query: 170 LIYSSTCATYGEPDKMPITES-TPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
++++S+ + YG + P +E +P + Y KK E+I ++ +++ LR+F
Sbjct: 233 IVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFT 292
Query: 229 VIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCV-RDYID 287
V G P GR P++ A F + I+ G I Y T D V RD+
Sbjct: 293 VYG--PWGR------PDM--------AYFFFTKDILHGKSI--DIYRTQDNQEVARDFTY 334
Query: 288 VTDLVDAHVLALANAKP-----GK------VGIYNVGTGKGRSVKEFVEACKKATGVNIK 336
+ D+V V AL A+ GK + +YN+G V V + G K
Sbjct: 335 IDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAK 394
Query: 337 VEYLSRRP--GDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYG 389
++L + P GD +++ S + + TDL L+ +W ++ YG
Sbjct: 395 -KHLIKMPRNGDVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKW---YVGYYG 444
Score = 52 (23.4 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 3 IVSANRKRNFAGRILVASVLTAVFIFMFSLSPDSNSTKAFPRH 45
+++A+ K F +LVA VL V IF + P S+S A H
Sbjct: 30 VLNASSKVLFRATLLVALVL--VLIFAINYPPLSDSRAAAAHH 70
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 169 (64.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 57/191 (29%), Positives = 87/191 (45%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
LVTG AG+IGS RLL D + V +DN + G A L+ L + F+ AD+
Sbjct: 4 LVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGR--ATN-LEHLADNSAHV-FVEADIVT 59
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEP-LRYYHNITSNTLVILEAMAAHKVKTLI 171
A ++ I ++ + V H AA V S +P N+ T+ + EA V+ ++
Sbjct: 60 AD-LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIG-TVRLAEAARQTGVRKIV 117
Query: 172 YSSTCAT-YGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVI 230
++S+ + YG P + P E+ P P +PY K E + F + + NV
Sbjct: 118 HTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVY 177
Query: 231 G--SDPEGRLG 239
G DP G G
Sbjct: 178 GPRQDPHGEAG 188
Score = 99 (39.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 37/120 (30%), Positives = 49/120 (40%)
Query: 244 PELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAK 303
P HG +G A+ ++ G R DGT RDY+ V D+VDA V A+
Sbjct: 179 PRQDPHGE-AGVVAIFAQALLSGKPTRVF----GDGTNTRDYVFVDDVVDAFVRVSADVG 233
Query: 304 PGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNW 363
G +N+GTGK S ++ A A G E+ R GD D L W
Sbjct: 234 GGLR--FNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGW 291
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 226 (84.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 92/352 (26%), Positives = 159/352 (45%)
Query: 44 RHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQL 103
R GV+ VLVTG AG++G+H + L + V +DN + ++K ++ + +
Sbjct: 87 RTRNGVS-VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGV 145
Query: 104 QFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAM- 162
+ D+ D + K+F F VMH AA A V + P Y H+ + + +LE
Sbjct: 146 FIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCK 205
Query: 163 AAHKVKTLIYSSTCATYGEPDKMPITEST-PQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
+A+ ++++S+ + YG K+P +E +P + Y KK E+I ++ +++
Sbjct: 206 SANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSL 265
Query: 222 MILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTAD-GT 280
LR+F V G P GR P++ A F R I+ G I + + A+ GT
Sbjct: 266 TGLRFFTVYG--PWGR------PDM--------AYFFFTRDILKGKAI--SIFEGANHGT 307
Query: 281 CVRDYIDVTDLVDAHVLALANAKP-----GK------VGIYNVGTGKGRSVKEFVEACKK 329
RD+ + D+V + AL A+ GK + ++N+G V + V ++
Sbjct: 308 VARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILER 367
Query: 330 ATGVNIKVEYLSR-RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
V K + R GD +++ S + E + TDLQ L+ RW
Sbjct: 368 LLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPS-TDLQTGLKKFVRW 418
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 225 (84.3 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 79/284 (27%), Positives = 137/284 (48%)
Query: 49 VTHVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSR----GNMGAVKVLQELFPQPGQ 102
+ +L+TGGAG+IGSH A+ L K + ++ ++D L N+G V L+EL
Sbjct: 9 IQKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCV--LKEL-----N 61
Query: 103 LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAM 162
+F ++ D++ + IF + D V+H AA +V S + +++ N T +LE
Sbjct: 62 FKFYKGNILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETC 121
Query: 163 AAHKVKTLIYSSTCATYG-------EPDKMPITESTPQK----PINPYGKAKKMSEDIII 211
+K+K IY ST YG + + I +S+ +K P NPY +K +E ++
Sbjct: 122 KNYKLKKFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQ 181
Query: 212 DFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRG 271
+ K+ + V+I R N+ G P+ +PE + + + + I G
Sbjct: 182 SYYKSFKLPVIITRANNIYG--PK------QYPE-KIIPKFINLLLNNKK-----CTIHG 227
Query: 272 TDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVG-IYNVGT 314
T NT R+Y+ + D+V A + L + G++G +YN+GT
Sbjct: 228 TGKNT------RNYLYIDDIVSAFDIIL---RKGEIGNVYNIGT 262
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 219 (82.2 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 85/337 (25%), Positives = 141/337 (41%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQEL-FPQPGQLQFIYADL 110
+LVTG AG+IGS ALRLLK+ + VT VD + +K + + +
Sbjct: 3 ILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERIRI 62
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D++A+ +F + + V+HFAA A V S P + + I++ H + L
Sbjct: 63 EDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQHL 122
Query: 171 IYSSTCATYGEPDKMPITE--STPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
+ +ST + YG K P E S P P+ Y K SE I + + +LR+F+
Sbjct: 123 VMASTSSAYGANQKFPFEERDSAPY-PLTIYAATKLASELIAHSHAHLYGVPTTVLRFFS 181
Query: 229 VIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDV 288
V G P GR A L G D G +R Y +R +D
Sbjct: 182 VYG--PWGRPDMAFF--LFTDKIFKGQPIDVFNH---GDLLRDFTYIDDLVEAIRRLMDT 234
Query: 289 TDLVDAHVLALANAKP-GKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDY 347
+V H++ + P + N+G + +++EA + A G + + +PGD
Sbjct: 235 PPVVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGDV 294
Query: 348 AEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTH 384
+ ++D ++ D L TD + + W + +
Sbjct: 295 KQTFADV-RLLDALTGYTPDTDYRTGIARFVDWYRDY 330
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 219 (82.2 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 87/272 (31%), Positives = 128/272 (47%)
Query: 52 VLVTGGAGYIGSHAALRLL--KDSYRVTIVDNLS-RGNMGAVKVLQELFPQPGQLQFIYA 108
VLVTGGAG+IGS+ L RV +D L+ GN+ + +++ P +F+
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQ---NPAY-RFVKG 65
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH--- 165
D+GDA V +I AE DAV+HFAA ++V S L P + T V+LE H
Sbjct: 66 DIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWES 125
Query: 166 -KVKTL--IYSSTCATYGEPDKMP-ITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
++ ++ ST YG + TE TP P +PY +K S+ ++ +++T + V
Sbjct: 126 GAIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 222 MILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTC 281
+ R N G P + E P L H ++G P L + G DG
Sbjct: 186 LTTRCSNNYG--PF-QFPEKLIP-LMIHNIVAGK---------P-LPVYG------DGRN 225
Query: 282 VRDYIDVTDLVDAHVLALANAKPGKVGIYNVG 313
VRD++ V D A L KPG+V +NVG
Sbjct: 226 VRDWLHVKDHSTAIETVLKGGKPGEV--FNVG 255
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 221 (82.9 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 84/316 (26%), Positives = 137/316 (43%)
Query: 51 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
++L+TG AG+I SH A RL++ Y++ ++D L +K L P +F+
Sbjct: 8 NILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDY--CSNLKNLNPSKHSPN-FKFVKG 64
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAM-AAHKV 167
D+ A VN + D +MHFAA +V S + N T V+LEA ++
Sbjct: 65 DIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 168 KTLIYSSTCATYGEPDKMPIT---ESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
+ I+ ST YGE D+ + E++ P NPY K +E +++ + ++ + V+
Sbjct: 125 RRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 225 RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRD 284
R NV G + PE I A RG + L I G DG+ VR
Sbjct: 185 RGNNVYGPNQ--------FPEKL----IPKFILLAMRGQV--LPIHG------DGSNVRS 224
Query: 285 YIDVTDLVDAHVLALANAKPGKV-GIYNVGTGKGRSV-KEFVEACKKATGVNIKVEYLSR 342
Y+ D+ +A + L + G V I + V K+ + NIK ++
Sbjct: 225 YLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIK--FVDN 282
Query: 343 RPGDYAEVYSDPSKIR 358
RP + + D K++
Sbjct: 283 RPFNDQRYFLDDQKLK 298
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 154 (59.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 52/166 (31%), Positives = 78/166 (46%)
Query: 50 THVLVTGGAGYIGSHAALRLL----KDSYRVTIVDNLS-RGNMGAVKVLQELFPQPGQLQ 104
TH+LVTG AG+IGS LL VT +D L+ GN + ++ P + +
Sbjct: 3 THLLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRG---HP-RYR 58
Query: 105 FIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA 164
F D+ DA ++ A D V+H AA ++V S L+ + T +L+A
Sbjct: 59 FERGDICDAPG-RRVMAGQ--DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATR 115
Query: 165 HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDII 210
H V + + ST YG + TE P +P +PY A K S D++
Sbjct: 116 HGVASFVQVSTDEVYGSLEHGSWTEDEPLRPNSPYS-ASKASGDLL 160
Score = 104 (41.7 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 35/110 (31%), Positives = 50/110 (45%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKP-GKVG-IYNVGTGKGRSVKEFVEACKKATGVNI 335
DG VR+++ V D HV + + G+ G +YN+G G S KE V +A G +
Sbjct: 209 DGLNVREWLHVDD----HVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGADW 264
Query: 336 -KVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTH 384
VEY+ R G D ++I+ EL + A DL L W H
Sbjct: 265 GSVEYVEDRKGHDRRYAVDSTRIQRELGF-APAVDLADGLAATVAWYHKH 313
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 195 (73.7 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 64/195 (32%), Positives = 101/195 (51%)
Query: 46 EPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGA--VKVLQELFPQPGQL 103
EP T VL+TGG G+IGS+ + + ++ T N + GA + V +E+ P +
Sbjct: 7 EP--TCVLITGGCGFIGSNY-INFTFNKWKNTKFINYDKLAFGASPLHVEKEIRESP-RY 62
Query: 104 QFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPL-RYYHNITSNTLVILEAM 162
+F+ A L D + K EN D V+HFAA+ +V ES + + NI S T +LE++
Sbjct: 63 KFVEAALEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTT-TLLESI 121
Query: 163 --AAHK-VKTLIYSSTCATYGEP--DKMPITESTP-QKPINPYGKAKKMSEDIIIDFSKT 216
+ +K VK L++ ST YG+ D P +ES P NPY +K E +I + +
Sbjct: 122 VNSPYKGVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHS 181
Query: 217 TNMAVMILRYFNVIG 231
+ +++R NV G
Sbjct: 182 YKLPYVMVRMNNVYG 196
Score = 53 (23.7 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 31/128 (24%), Positives = 48/128 (37%)
Query: 267 LKIRGTDYNT-ADGTCVRDYIDVTDLVDAHVLALANAKPGKVG-IYNVGTGKGRSVKEFV 324
L + G Y DG R ++ V D +A A G +G IYN+GT + E
Sbjct: 211 LALDGKPYPLMGDGLHTRSWMYVEDCSEAITRV---ALEGTLGEIYNIGTDFEMTNIELT 267
Query: 325 EACKKATGVNIKVEY-------LSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIA 377
+ + E + RP Y D SKIR+ + W +G ++
Sbjct: 268 KMIHFTVSKLLNREPTAPTFAPIPDRPYHDRRYYIDFSKIRNAMGWQCTTPFSEGLMKTI 327
Query: 378 WRWQKTHI 385
+ K H+
Sbjct: 328 DYYVKLHV 335
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 94/364 (25%), Positives = 157/364 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNMGAVKVLQELFPQPGQLQFIYAD 109
+LVTGGAG+IGS ++ ++ V VD L+ GN+ ++ + + + F +AD
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD----SERYAFEHAD 58
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH---- 165
+ DA A+++IFA++ DAVMH AA ++V S P + T V+LEA +
Sbjct: 59 ICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSAL 118
Query: 166 ---KVKTLIYS--STCATYGE---PDK------MPI-TESTPQKPINPYGKAKKMSEDII 210
K K+ + ST YG+ PD+ +P+ TE+T P +PY +K S+ ++
Sbjct: 119 NDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLV 178
Query: 211 IDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIR 270
+ +T + ++ N G PE I +A G L I
Sbjct: 179 RAWKRTYGLPTIVTNCSN--------NYGPYHFPEKL----IPLVILNALEG--KALPIY 224
Query: 271 GTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGT-GKGRSVKEFVEACK- 328
G G +RD++ V D A + K G+ YN+G + +++ + C
Sbjct: 225 GK------GDQIRDWLYVEDHARALYTVVTEGKAGET--YNIGGHNEKKNIDVVLTICDL 276
Query: 329 ------KATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQK 382
K ++ Y++ RPG D KI EL W + T + ++ W
Sbjct: 277 LDEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQET-FESGIRKTVEWYL 335
Query: 383 THIN 386
+ N
Sbjct: 336 ANTN 339
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 207 (77.9 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 83/343 (24%), Positives = 157/343 (45%)
Query: 51 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
+++VTGGAG+IGS+ + + VT++D L+ A L+E+ +++ +
Sbjct: 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRAN--LEEILGD--RVELVVG 61
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
D+ D++ V+K+ A+ DA++H+AA ++ S +P + + T ++LEA + ++
Sbjct: 62 DIADSELVDKLAAKA--DAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIR 119
Query: 169 TLIYSSTCATYGEPDKMPITESTPQKPINPYGK-AKKMSEDIIIDFSKTTNMAVMIL--- 224
+ ST YG+ +P+ E P P K + + +S T + +I+
Sbjct: 120 -FHHVSTDEVYGD---LPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAW 175
Query: 225 -RYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVR 283
R F V + P+ + + I + GI P K+ G +G VR
Sbjct: 176 VRSFGVKATISNCSNNYGPYQHIEKF--IPRQITNILSGIKP--KLYG------EGKNVR 225
Query: 284 DYIDVTDLVDAHVLALANAKPGKVG-IYNVGTGKGRSVKEFVEAC-KKATGVNIKVEYLS 341
D+I D V A+ G++G Y +G ++ KE +E +K + ++++
Sbjct: 226 DWIHTNDH-STGVWAILTK--GRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVT 282
Query: 342 RRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTH 384
R G D +K+R+EL W +FT+ + L+ +W H
Sbjct: 283 DRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 60/205 (29%), Positives = 102/205 (49%)
Query: 38 STKAFP----RHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVL 93
+TK+FP R+E +L+TGGAG++GSH +L+ D + V +DN G K +
Sbjct: 121 TTKSFPSVRYRNEETRKRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRK---KNV 177
Query: 94 QELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS 153
+ P + ++ D+ VN F E D + H A+ A P++ I +
Sbjct: 178 EHWIGHPN-FEMVHHDV-----VNPYFVE--VDQIYHLASPASPPHYMYNPVK---TIKT 226
Query: 154 NTLVILEAMA-AHKVK-TLIYSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMS 206
NTL + + A +VK T++ +ST YG+P+ P E+ I P Y + K+++
Sbjct: 227 NTLGTINMLGLAKRVKATVLLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVA 286
Query: 207 EDIIIDFSKTTNMAVMILRYFNVIG 231
E +++ ++K N+ + I R FN G
Sbjct: 287 ESLMVAYNKQENIKIRIARIFNTFG 311
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 141 (54.7 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 34/111 (30%), Positives = 59/111 (53%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLS-RGNMGAVKVLQELFPQPGQLQFIYAD 109
+L+TGGAG+IGS ++K++ + +D L+ GN+ ++ + E + F +AD
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE----SNRYNFEHAD 58
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILE 160
+ D+ + +IF + DAVMH AA ++V S P + T +LE
Sbjct: 59 ICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLE 109
Score = 78 (32.5 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 26/93 (27%), Positives = 39/93 (41%)
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFV--------EACKKA 330
G +RD++ V D A + + K G+ YN+G + + V E KA
Sbjct: 227 GDQIRDWLYVEDHARALHMVVTEGKAGET--YNIGGHNEKKNLDVVFTICDLLDEIVPKA 284
Query: 331 TGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNW 363
T ++ Y++ RPG D KI EL W
Sbjct: 285 TSYREQITYVADRPGHDRRYAIDAGKISRELGW 317
Score = 58 (25.5 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 174 STCATYGE---PDK------MPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
ST YG+ PD+ +P+ TE+T P +PY +K S+ ++ + +T + ++
Sbjct: 132 STDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIV 191
Query: 224 LRYFNVIG 231
N G
Sbjct: 192 TNCSNNYG 199
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 193 (73.0 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 97/355 (27%), Positives = 151/355 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLS-RGNMGAVKVLQELFPQPGQLQFIYAD 109
+L+TGGAG+IGS ++ + S V +VD L+ GN+ ++ + Q + F D
Sbjct: 4 ILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA----QSERFAFEKVD 59
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH---- 165
+ D + ++F E+ D VMH AA ++V S P + T +LEA A+
Sbjct: 60 ICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNAL 119
Query: 166 --KVKTLI---YSSTCATYGEPDKMP--ITESTPQKPINPYGKAKKMSEDIIIDFSKTTN 218
K+ + ST YG+ TE+TP P +PY +K S+ ++ + +T
Sbjct: 120 TEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 219 MAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTAD 278
+ +I N G PE I +A G L + G +
Sbjct: 180 LPTLITNCSN--------NYGPYHFPEKL----IPLMILNALAG--KSLPVYG------N 219
Query: 279 GTCVRDYIDVTDLVDAHVLAL-ANAKPGKVG-IYNVGTGKGRSVKEFVEA-CK------- 328
G +RD++ V D H AL A GKVG YN+G R + VE C+
Sbjct: 220 GQQIRDWLYVED----HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAP 275
Query: 329 -KATGV-NIK--VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAW 378
K GV + + + +++ RPG D SKI EL W + T G + + W
Sbjct: 276 NKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQW 330
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 170 (64.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 52/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH L+ + V +VDN G V E + + I+ D+
Sbjct: 118 ILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNV----EHWLGHENFELIHHDI- 172
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
VN +F E D + H A+ A P++ T T+ +L +A + ++
Sbjct: 173 ----VNPLFIE--IDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVL-GLAKRVMAKVL 225
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P P E+ PI P Y + K++SE + ++K + V + R
Sbjct: 226 IASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARI 285
Query: 227 FNVIG 231
FN G
Sbjct: 286 FNTYG 290
Score = 68 (29.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKV 337
+G R + V+DLVD + +A+ V N+G +++ EF E KK G +
Sbjct: 319 NGKQTRSFQYVSDLVDGMIALMASNYTQPV---NLGNPVEQTIGEFAEIIKKLVGGPSVI 375
Query: 338 EYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ 375
+ D D ++ R L+W + L+ LQ
Sbjct: 376 KQSKAMEDDPQRRKPDITRARQLLHWEPK-VPLETGLQ 412
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 93/362 (25%), Positives = 153/362 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLS-RGNMGAVKVLQELFPQPGQLQFIYAD 109
+LVTGGAG+IGS ++ ++ V VD L+ GN ++ + + + F +AD
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSD----SERYVFEHAD 58
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEA-------M 162
+ DA A+ +IFA++ DAVMH AA ++V S P + T V+LEA +
Sbjct: 59 ICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSAL 118
Query: 163 AAHKVKTLIYS--STCATYGE---PDK------MPI-TESTPQKPINPYGKAKKMSEDII 210
+ K + + ST YG+ PD+ +P+ TE+T P +PY +K S+ ++
Sbjct: 119 DSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLV 178
Query: 211 IDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIR 270
+ +T + ++ N G PE I +A G L I
Sbjct: 179 RAWKRTYGLPTIVTNCSN--------NYGPYHFPEKL----IPLVILNALEG--KALPIY 224
Query: 271 GTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGT-GKGRSVKEFVEACK- 328
G G +RD++ V D A + K G+ YN+G + +++ + C
Sbjct: 225 GK------GDQIRDWLYVEDHARALYTVVTEGKAGET--YNIGGHNEKKNIDVVLTICDL 276
Query: 329 ------KATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAWRWQ 381
K ++ Y++ RPG D KI L W + T G + + W
Sbjct: 277 LDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLS 336
Query: 382 KT 383
T
Sbjct: 337 NT 338
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 188 (71.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 97/360 (26%), Positives = 158/360 (43%)
Query: 48 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNM-GAVKVLQELFPQPGQLQFI 106
G ++LVTGGAG+IGS A +R + + R ++V NL + G ++ L ++ P + F
Sbjct: 5 GKKNILVTGGAGFIGS-AVVRHIIQNTRDSVV-NLDKLTYAGNLESLTDIADNP-RYAFE 61
Query: 107 YADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEA----- 161
D+ D ++++FA+ DAVMH AA ++V + + T +LEA
Sbjct: 62 QVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYW 121
Query: 162 --MAAHKVKTLIYS--STCATYGE---PDKMPITESTPQKPINPYGKAKKMSEDIIIDFS 214
M + K + + ST YG+ D + TE+TP P +PY +K ++ ++ +
Sbjct: 122 QQMPSEKREAFRFHHISTDEVYGDLHGTDDL-FTETTPYAPSSPYSASKAAADHLVRAWQ 180
Query: 215 KTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDY 274
+T + ++ S+ G PE I +A G P L + G
Sbjct: 181 RTYRLPSIV--------SNCSNNYGPRQFPEKL----IPLMILNALSGK-P-LPVYG--- 223
Query: 275 NTADGTCVRDYIDVTDLVDAHVLALANA-KPGKVG-IYNVGTGKGRSVKEFVEA-C---- 327
DG +RD++ V D H AL G VG YN+G ++ E V+ C
Sbjct: 224 ---DGAQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLE 276
Query: 328 ----KKATGV---NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+K GV + ++ RPG A D +KIR +L W T + L+ +W
Sbjct: 277 ELAPEKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLET-FESGLRKTVQW 335
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 188 (71.2 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 92/363 (25%), Positives = 146/363 (40%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+LVTGGAG+IGS ++ ++ V VD L+ G ++ L E+ + F AD+
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA--GNLESLAEISDSE-RYSFENADI 59
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH----- 165
DA+ F ++ DAVMH AA ++V S P + T V+LEA +
Sbjct: 60 CDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLD 119
Query: 166 --KVKTLIYS--STCATYGE---PDKMP-------ITESTPQKPINPYGKAKKMSEDIII 211
K K + ST YG+ PD++ TE+T P +PY +K S+ ++
Sbjct: 120 DEKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 212 DFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRG 271
+ +T + ++ S+ G PE I +A G L I G
Sbjct: 180 AWKRTYGLPTIV--------SNCSNNYGPYHFPEKL----IPLVILNALEG--KALPIYG 225
Query: 272 TDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFV------- 324
G +RD++ V D A + K G+ YN+G + + V
Sbjct: 226 K------GDQIRDWLYVEDHARALYTVVTEGKAGET--YNIGGHNEKKNIDVVFTICDLL 277
Query: 325 -EACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKT 383
E K ++ Y++ RPG D KI EL W + T + ++ W
Sbjct: 278 DEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQET-FESGIRKTVEWYLA 336
Query: 384 HIN 386
+ N
Sbjct: 337 NTN 339
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 185 (70.2 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 97/354 (27%), Positives = 146/354 (41%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLS-RGNMGAVKVLQELFPQPGQLQFIYA 108
++LVTGG+G+IGS ++ + I +D L+ N A L+E+ P + F
Sbjct: 3 NILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSA---LREVENNPRYV-FEKV 58
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA--HK 166
D+ D + IF + DAVMH AA ++V S + T +LE H
Sbjct: 59 DICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHT 118
Query: 167 V----KTLI---YSSTCATYGEPD--KMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT 217
+ KT + ST YG+ + TE +P P +PY +K S ++ + +T
Sbjct: 119 LDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTY 178
Query: 218 NMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTA 277
+ V+I N G H E IS A P L I G
Sbjct: 179 GLPVIITNSSN--------NYGAYQHAEKLIPLMISNAVMGK-----P-LPIYG------ 218
Query: 278 DGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEA-CKKATGV--- 333
DG +RD++ V D V A L L + G+ YN+G ++ E V+ C+ +
Sbjct: 219 DGQQIRDWLFVEDHVQASYLVLTKGRVGEN--YNIGGNCEKTNLEVVKRICQLLEELAPS 276
Query: 334 ---NIK-----VEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQ-IAW 378
+IK + ++ RPG D SKI EL W + T QG Q + W
Sbjct: 277 KPNHIKYYEDLMTFVKDRPGHDVRYSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 184 (69.8 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 94/356 (26%), Positives = 152/356 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSY-RVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+LVTGGAG+IGS +++++ V +D L+ G ++ L ++ P + F D+
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYA--GNLESLTDIADNP-RYAFEQVDI 60
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA------ 164
D ++++FA++ DAVMH AA ++V S + T +LEA A
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 165 ---HKVKTLIYSSTCATYGE---PDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTN 218
H+ + ST YG+ D + TE+ P P +PY +K S+ ++ + +T
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDL-FTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 219 MAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTAD 278
+ ++ N G PE I +A G P L + G D
Sbjct: 180 LPTIVTNCSN--------NYGPYHFPEKL----IPLMILNALDGK-P-LPVYG------D 219
Query: 279 GTCVRDYIDVTDLVDAHVLALANA-KPGKVG-IYNVGTGKGRSVKEFVEA-C-------- 327
G +RD++ V D H AL G VG YN+G ++ E V+ C
Sbjct: 220 GMQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAP 275
Query: 328 KKATGV---NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+K GV + ++ RPG A D +KIR +L W T + L+ +W
Sbjct: 276 EKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLET-FESGLRKTVQW 330
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 182 (69.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 94/356 (26%), Positives = 150/356 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+LVTGGAG+IGS +++++ + VD L+ G ++ L E+ P + F D+
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYA--GNLESLTEVADNP-RYAFEQVDI 60
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA------ 164
D ++++FA+ DAVMH AA ++V S + T +LEA A
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 165 ---HKVKTLIYSSTCATYGE---PDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTN 218
H+ + ST YG+ D + TE+ P P +PY +K S+ ++ + +T
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDL-FTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 219 MAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTAD 278
+ ++ N G PE I +A G P L + G D
Sbjct: 180 LPTIVTNCSN--------NYGPYHFPEKL----IPLMILNALDGK-P-LPVYG------D 219
Query: 279 GTCVRDYIDVTDLVDAHVLALANA-KPGKVG-IYNVGTGKGRSVKEFVEA-C-------- 327
G +RD++ V D H AL G VG YN+G ++ E V+ C
Sbjct: 220 GMQIRDWLFVED----HARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAP 275
Query: 328 KKATGV---NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+K GV + ++ RPG D +KIR +L W T + L+ +W
Sbjct: 276 EKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLET-FESGLRKTVQW 330
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 86/320 (26%), Positives = 135/320 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA--D 109
V +TG G +GSH A LL + V R + P LQF A D
Sbjct: 3 VWITGAGGMMGSHLAEMLLAAGHDVYAT--YCRPTI-----------DPSDLQFNGAEVD 49
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
+ D +V A DAV H AA +Y S P+ T ++ EA+ +
Sbjct: 50 ITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHA 109
Query: 170 -LIYSSTCATYG--EPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+I + + A YG +P ++PI E +P++PYG +K ++ + + K+ M ++ R
Sbjct: 110 KIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARI 169
Query: 227 FNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYI 286
FN G P ++G+A +R + +A IR + T R +
Sbjct: 170 FNCTG--PR-KVGDALSDFVRRCTWLEHHPEQSA--------IRVGNLKTK-----RTIV 213
Query: 287 DVTDLVDAHVLALANAKPG---KVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRR 343
DV DL A +L L + G VG ++ G +K+ + ACK+ V +V+ R
Sbjct: 214 DVRDLNRALMLMLDKGEAGADYNVG-GSIAYEMGDVLKQVIAACKRDDIVP-EVDPALLR 271
Query: 344 PGDYAEVYSDPSKIRDELNW 363
P D +Y D SK+ W
Sbjct: 272 PTDEKIIYGDCSKLAAITGW 291
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 149 (57.5 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 51/173 (29%), Positives = 86/173 (49%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG-NMGAVKVLQELFPQPGQLQFI-YADL 110
L+TG G GS+ A LL+ Y V + S N + + + + Q F+ Y DL
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYGDL 67
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMA--AHKV 167
D+ + +I + D V + A ++V S E Y ++ + TL +LEA+ +
Sbjct: 68 TDSSNLTRILKDVQPDEVYNLGAQSHVAVS-FECPEYTADVDAIGTLRLLEAIRFLGLEK 126
Query: 168 KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
KT Y +ST YGE ++P +E+TP P +PY AK + I++++ ++ M
Sbjct: 127 KTKFYQASTSELYGEVQEIPQSETTPFHPRSPYAVAKMYAYWIVVNYRESYGM 179
Score = 62 (26.9 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 333 VNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
+ +KV+ RP + + DPSK +++L W + T
Sbjct: 305 IMVKVDPRYFRPAEVETLLGDPSKAKEKLGWVPQIT 340
Score = 48 (22.0 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 282 VRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNI 335
+RD+ D V + L P + + TGK SV+EFV G+ +
Sbjct: 226 LRDWGHAKDYVRMQWMMLQQEHPDD---FVIATGKQISVREFVTLSALEAGIEL 276
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 179 (68.1 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 58/189 (30%), Positives = 89/189 (47%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQ-LQFIYADL 110
+LVTGGAGY+GS +LL+ YRVT+ D L G+ + P+ L + D+
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTLFFGD--------DFLPKENPYLNIVEGDI 59
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTL-EPLRYYHNITSNTLVILEAMAAHKVKT 169
D + + + F + DAV+ A ++ L E L N+ + ++ A AA VK
Sbjct: 60 RDTERLKQCFKDA--DAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAG-VKR 116
Query: 170 LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
IY+S+ + YG + +TE P P+ Y K K M E ++ + V I R +
Sbjct: 117 FIYASSSSVYGVSETKDVTEEHPLVPLTLYNKYKGMCEPLLFKHQSPEFVCVTI-RPATL 175
Query: 230 IGSDPEGRL 238
G P RL
Sbjct: 176 CGYAPRQRL 184
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 175 (66.7 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 79/326 (24%), Positives = 138/326 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
L+TG AG++G + A L + + V SR N + P ++ I D+ D
Sbjct: 4 LITGVAGFVGKYLANHLTEQNVEVF---GTSRNN-------EAKLPN---VEMISLDIMD 50
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIY 172
++ V K+ ++ D + H AA + V +S L + TL +L+A+ + I
Sbjct: 51 SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 110
Query: 173 S-STCATYGE--PDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
+ + YG P++ P++E +P++PYG +K + + K M ++ R FN
Sbjct: 111 TIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNH 170
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVT 289
IG P LG ++ I + II K+ + VRD+ DV
Sbjct: 171 IG--PGQSLGFVTQDFAKQIVDIE---MEKQEPII---KVGNLE-------AVRDFTDVR 215
Query: 290 DLVDAHVLALANAKPGKVGIYNVGTG-KGRSVKEFVEACKKATGVNIKVEYLSRRPGDYA 348
D+V A+ L K G V G G + + V + + A ++ ++ L RP +
Sbjct: 216 DIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVK-IDTELNPLQLRPSEVP 274
Query: 349 EVYSDPSKIRDELNWTARFTDLQGSL 374
+ +++D W R L+ SL
Sbjct: 275 TLIGSNKRLKDSTGWKPRIP-LEKSL 299
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA- 108
+LVTG G+IGSH LL Y R + N S + G L L P+ + ++A
Sbjct: 8 ILVTGADGFIGSHLTEALLMRGYDTRAFVYYN-SFNSWGW---LDHLDPELLKSLDVFAG 63
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
D+ D V + A D V+H AA+ + S P Y TL +++A V
Sbjct: 64 DIRDPHGVRE--AMKGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGVA 121
Query: 169 TLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
++++ST YG +PITE P + +PY +K ++ I + F + + V I+R FN
Sbjct: 122 KVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADQIAMSFYSSFDTPVAIIRPFN 181
Query: 229 VIGSDPEGR 237
G R
Sbjct: 182 TYGPRQSAR 190
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/185 (29%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 91 ILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 141
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 142 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 198
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P TE PI P Y + K+++E + + K + V + R
Sbjct: 199 LASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 258
Query: 227 FNVIG 231
FN G
Sbjct: 259 FNTFG 263
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 173 (66.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 58/186 (31%), Positives = 91/186 (48%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
L+TGGAG+IGSH A L+ Y VTIVDN +G K EL + ++ I + D
Sbjct: 6 LITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKN---KYHDELMKE---IRVIPISVLD 59
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEP-LRYYHNITSNTLVILEAMAAHKVKTLI 171
++ ++ N D V H AA+ V ++T+E + T IL+A K K ++
Sbjct: 60 KNSIYELV--NQHDVVFHLAAILGV-KTTMEKSIELIETNFDGTRNILQAALKGK-KKVV 115
Query: 172 YSSTCATYGEPDKMPITESTPQ-----KPIN-PYGKAKKMSEDIIIDFSKTTNMAVMILR 225
++ST YG+ K P +E + I Y K + E + + ++ + V I+R
Sbjct: 116 FASTSEVYGKA-KPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LEGLPVTIVR 173
Query: 226 YFNVIG 231
YFN+ G
Sbjct: 174 YFNIYG 179
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 73/284 (25%), Positives = 120/284 (42%)
Query: 117 NKIFA-ENAFDAVMHFAAVAYVGESTLEP-LRYYHNITSNTLVILEAMAAHKVKTLIYSS 174
N I+ N D V H AA+ V ++T+E + T IL+A K K ++++S
Sbjct: 61 NSIYELVNQHDVVFHLAAILGV-KTTMEKSIELIETNFDGTRNILQAALKGK-KKVVFAS 118
Query: 175 TCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDP 234
T YG+ K P +E + YG K+ I KT + + G
Sbjct: 119 TSEVYGKA-KPPFSEEGDRL----YGATSKIRWSYAI--CKTLEETLCL-------GYAL 164
Query: 235 EGRLGEAPHPELREHGRISGACFDAA-RGIIP---GLKIRGTDYNT-ADGTCVRDYIDVT 289
EG P +R D G+IP ++G D DG R + V+
Sbjct: 165 EG----LPVTIVRYFNIYGPRAKDGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVS 220
Query: 290 DLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVN---IKVEYLSRRPGD 346
D V+A + A+ G+ I N+G+ +S+KE E KK T + ++V + P
Sbjct: 221 DAVEATIRAMDEKVNGE--IINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHG 278
Query: 347 YAEVYS---DPSKIRDELNWTARFTDLQGSLQIAWRWQKTHING 387
+ E+ + D +K++D + + A+ T G L+ +W + NG
Sbjct: 279 FEEIPNRRPDVTKLKDLVQFQAKVTWEDG-LKETIKWFREEDNG 321
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 68 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 118
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 119 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 175
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P TE P+ P Y + K+++E + + K + V + R
Sbjct: 176 LASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 235
Query: 227 FNVIG 231
FN G
Sbjct: 236 FNTFG 240
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 139
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 140 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 196
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P E PI P Y + K+++E + + K + V + R
Sbjct: 197 LASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 256
Query: 227 FNVIGS 232
FN GS
Sbjct: 257 FNTFGS 262
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 172 (65.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 91/334 (27%), Positives = 137/334 (41%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQPGQLQFI-YADL 110
L+TG +G GS+ A LL Y V ++ S N G + L +P F+ Y DL
Sbjct: 5 LITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYGDL 64
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKVKT 169
DA ++N++ E D + + A ++V S P Y I + T+ +LE + + T
Sbjct: 65 NDASSINRVLREVRPDEIYNLGAQSHVRVSFDVP-EYTGEIDALGTVRLLEGIRETGLNT 123
Query: 170 LIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
Y +S+ YG+ + P E+TP P +PY AK + I +++ ++ M FN
Sbjct: 124 RFYQASSSELYGKVVETPQKETTPFYPRSPYACAKAYAYYITVNYRESYGMYACNGILFN 183
Query: 229 VIGSDPEGRLGEA--PHPELREHGRISGACFDAAR-GIIPGLKIRGT--DYNTADGTCVR 283
P R GE R GRI D G + + G DY A ++
Sbjct: 184 --HESP--RRGETFVTRKITRAAGRIKTGLQDRLYLGNLDAKRDWGFAGDYVEAMWLMLQ 239
Query: 284 DYIDVTDLVDA-----HVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVE 338
+ D V A V A ++G+ GKG K K + I
Sbjct: 240 QQ-EADDFVVATGETWSVREFAERVFARLGMPLEWQGKGGHEKGIDTNSGKIV-IEIDPR 297
Query: 339 YLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQG 372
Y RP + + DP+K R +L W R D QG
Sbjct: 298 YF--RPAEVDLLLGDPAKARRQLGWQPR-VDFQG 328
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 171 (65.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 81/319 (25%), Positives = 134/319 (42%)
Query: 54 VTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVK-VLQELFPQPGQLQFIYADLG 111
+TG G GS+ A LL+ Y V ++ S N + + +E + +L Y D+
Sbjct: 7 ITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHYGDIT 66
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMA-AHKVKTL 170
D +NK+ E V + AA ++V S P+ I TL ILEA+ A K +
Sbjct: 67 DGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPVYTMETIGLGTLNILEAIKNADNAKEI 126
Query: 171 IY--SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
+ +S+ YG+ +P TESTP P +PY AK + I++ ++ + FN
Sbjct: 127 RFYQASSSEMYGDVKSVPQTESTPFNPRSPYACAKVFAHYQTINYRESYGLHASTGILFN 186
Query: 229 VIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDV 288
E+P R ++ I+ GL+ + + RD+
Sbjct: 187 ----------HESPR---RGETFVTRKITSGIAKILAGLEKK---IYLGNLEAKRDWGYA 230
Query: 289 TDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVN----IKVEYLSRRP 344
D V+A L L P Y + TG+ SVKE +E +N + ++ RP
Sbjct: 231 KDYVEAMWLMLQQDTPDD---YVIATGETWSVKELLEYSFNLVNLNWRDFVVIDPKYYRP 287
Query: 345 GDYAEVYSDPSKIRDELNW 363
+ + +P K +++L W
Sbjct: 288 AEVDLLLGEPKKAKEKLGW 306
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 167 (63.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 68/277 (24%), Positives = 119/277 (42%)
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
DL + ++ ++ E DAV+H A YV E+ +P R TL +L+A+ A
Sbjct: 39 DLLEPDSLGDLWPELP-DAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 97
Query: 169 -TLIYSSTCATYGEPDK--MPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
T +Y S+ YG+ + +PI E P NPY +K +E + + + T V++ R
Sbjct: 98 GTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVAR 157
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
FN IG P ++ I+ A AR + GL+ + D + RD+
Sbjct: 158 PFNHIG------------PGQKDSFVIASAARQIAR-MKQGLQANRLEVGDIDVS--RDF 202
Query: 286 IDVTDLVDAHVLALANAKPGKV-GIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRP 344
+DV D++ A++ L++ + G V + + K R + E + + + I + R
Sbjct: 203 LDVQDVLSAYLRLLSHGEAGAVYNVCSGQEQKIRELIELLADIAQVE-LEIVQDPARMRR 261
Query: 345 GDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQ 381
+ V +++ D W T Q I W+
Sbjct: 262 AEQRRVRGSHARLHDTTGWKPEITIKQSLRAILSDWE 298
Score = 39 (18.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 52 VLVTGGAGYIGSH 64
+ VTG +G++G H
Sbjct: 5 LFVTGLSGFVGKH 17
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 171 (65.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 84
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 85 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 141
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P +E PI P Y + K+++E + + K + V + R
Sbjct: 142 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 201
Query: 227 FNVIG 231
FN G
Sbjct: 202 FNTFG 206
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 143 (55.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 50/175 (28%), Positives = 87/175 (49%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQ--PGQLQFIYAD 109
L+TG G GS+ A LL+ Y V IV S N G ++ L + G ++ Y D
Sbjct: 13 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIEGNMKLHYGD 72
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA---- 164
L D+ + KI E + + + A ++V + + + Y ++ TL +L+A+
Sbjct: 73 LTDSTCLVKIINEVKPNEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGLI 131
Query: 165 HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+ VK +ST +G+ ++P E+TP P +PYG AK + I+++F + N+
Sbjct: 132 NSVK-FYQASTSELFGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 185
Score = 70 (29.7 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 316 KGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
+G++ E V CK+ +++ V + RP + + D +K R +LNW R T
Sbjct: 285 EGKNENE-VGRCKETGKIHVTVNHKYYRPTEVDFLQGDCTKARQKLNWKPRVT 336
Score = 60 (26.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNI 335
RD+ D V+A L L +P + + TG+ SV+EFVE K G I
Sbjct: 233 RDWGHARDYVEAMWLMLQTDEPED---FVIATGEVHSVREFVEKSFKHIGKTI 282
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 151 (58.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 58/199 (29%), Positives = 96/199 (48%)
Query: 31 SLSPDSNSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGA 89
S SP ++S K PR L+TG G GS+ A LL+ Y V IV S N G
Sbjct: 9 SCSPSNSSGK--PRKV-----ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR 61
Query: 90 VKVLQELFPQP-----GQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEP 144
+ + L+ P G ++ Y DL D+ + KI E + + A ++V + + +
Sbjct: 62 I---EHLYKNPHAHTEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDL 117
Query: 145 LRYYHNITS-NTLVILEAM-AAHKVKTLIY--SSTCATYGEPDKMPITESTPQKPINPYG 200
Y ++ TL +L+A + T+ + +ST YG+ ++P E+TP P +PYG
Sbjct: 118 AEYTADVDGLGTLRLLDATKTCGLINTVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG 177
Query: 201 KAKKMSEDIIIDFSKTTNM 219
AK + I+++F + N+
Sbjct: 178 AAKLYAYWIVVNFREAYNL 196
Score = 61 (26.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNI 335
RD+ D V+A L L +P + + TG+ SV+EFVE K G I
Sbjct: 244 RDWGHAKDYVEAMWLMLQTDEPED---FVISTGEVHSVREFVEKAFKHIGKTI 293
Score = 60 (26.2 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 316 KGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
+G++ E V C + +++KV+ RP + + D S+ +++L WT +
Sbjct: 296 EGKNENE-VGRCSETGKIHVKVDLKYYRPTEVDFLQGDCSQAKNKLGWTPK 345
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 171 (65.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 85 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 135
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 136 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 192
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P +E PI P Y + K+++E + + K + V + R
Sbjct: 193 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 252
Query: 227 FNVIG 231
FN G
Sbjct: 253 FNTFG 257
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 171 (65.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 141
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 142 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 198
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P +E PI P Y + K+++E + + K + V + R
Sbjct: 199 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 258
Query: 227 FNVIG 231
FN G
Sbjct: 259 FNTFG 263
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 171 (65.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 141
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 142 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 198
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P +E PI P Y + K+++E + + K + V + R
Sbjct: 199 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 258
Query: 227 FNVIG 231
FN G
Sbjct: 259 FNTFG 263
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 171 (65.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 141
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 142 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 198
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P +E PI P Y + K+++E + + K + V + R
Sbjct: 199 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 258
Query: 227 FNVIG 231
FN G
Sbjct: 259 FNTFG 263
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 171 (65.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 53/185 (28%), Positives = 85/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 141
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 142 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 198
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P +E PI P Y + K+++E + + K + V + R
Sbjct: 199 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 258
Query: 227 FNVIG 231
FN G
Sbjct: 259 FNTFG 263
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 170 (64.9 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 53/185 (28%), Positives = 84/185 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 92 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 142
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 143 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 199
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
+ST YG+P+ P E PI P Y + K+++E + + K + V + R
Sbjct: 200 LASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 259
Query: 227 FNVIG 231
FN G
Sbjct: 260 FNTFG 264
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 61/264 (23%), Positives = 113/264 (42%)
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA---H 165
DL D+ +++++ E ++H AA+A ++ +P + + EA+ A H
Sbjct: 54 DLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPH 113
Query: 166 KVKTLIYSSTCATYGEPDKM---PITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVM 222
V L+++ + +YG + E T +P+ PY A K + D+ + + + +
Sbjct: 114 AV--LVFAGSSESYGASFNTVAGAVNEGTALRPLTPYA-ATKAAADVALGQMRNDGLNAV 170
Query: 223 ILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCV 282
R FN G P G++P + A P +++ D +
Sbjct: 171 RFRAFNHTG--P----GQSPDYVVASFAAQIAQII--AGDHPPVIRVGNLD-------AM 215
Query: 283 RDYIDVTDLVDAHVLAL-ANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEY-- 339
RD++DV D+V + LAL P G++N+ +G RS++ + GV+I +E
Sbjct: 216 RDFVDVRDVVRGYRLALETELDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDP 275
Query: 340 LSRRPGDYAEVYSDPSKIRDELNW 363
R D + D ++ R EL W
Sbjct: 276 AKLRKNDVPRTWGDANRARTELGW 299
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TGGAG++GSH +L+ D + VT+VDN G V+ G F +L
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE------HWIGHENF---ELI 84
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ V ++ E D + H A+ A P++ T TL +L +A L+
Sbjct: 85 NHDVVEPLYIE--VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNML-GLAKRVGARLL 141
Query: 172 YSSTCATYGEPDKMPITEST--PQKPINP---YGKAKKMSEDIIIDFSK 215
+ST YG+P+ P +E PI P Y + K+++E + + K
Sbjct: 142 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 190
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 145 (56.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 52/178 (29%), Positives = 86/178 (48%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP-----GQLQFI 106
L+TG G GS+ A LL+ Y V IV S N G + + L+ P G ++
Sbjct: 38 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPHAHIEGNMKLH 94
Query: 107 YADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA- 164
Y DL D+ + KI E + + A ++V + + + Y ++ TL +L+A
Sbjct: 95 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGLGTLRLLDATKTC 153
Query: 165 ---HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+
Sbjct: 154 GLINSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 210
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 316 KGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR--FTDL 370
+G++ E V C + +++KV++ RP + + D SK +++L W + F +L
Sbjct: 310 EGKNENE-VGRCSETGKIHVKVDHKYYRPTEVEFLQGDCSKAKNKLGWIPKVSFNEL 365
Score = 55 (24.4 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVE 325
RD+ D V+A L L +P + + TG+ SV+EFVE
Sbjct: 258 RDWGHAKDYVEAMWLMLQTDEPED---FVISTGEVHSVREFVE 297
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 140 (54.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 54/196 (27%), Positives = 88/196 (44%)
Query: 33 SPDSNSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKV 92
S D N T+A + L+TG G GS+ A LLK Y V + + R +
Sbjct: 30 SKDQNGTEAGAEGDSRDKVALITGITGQDGSYLAEFLLKKDYEVHGI--IRRASTFNTTR 87
Query: 93 LQELFPQP-----GQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY 147
++ L+ P G+++ Y D+ D+ ++ KI + + AA ++V S + Y
Sbjct: 88 IEHLYADPKAHKGGRMKLHYGDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVS-FDLSEY 146
Query: 148 YHNITS-NTLVILEAMAA---HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAK 203
+ + TL IL+A+ K +ST YG+ + P E TP P +PY AK
Sbjct: 147 TAEVDAVGTLRILDAIRTCGMEKNVRFYQASTSELYGKVVETPQNEQTPFYPRSPYACAK 206
Query: 204 KMSEDIIIDFSKTTNM 219
I+I++ + NM
Sbjct: 207 MYGFWIVINYREAYNM 222
Score = 69 (29.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 314 TGKGRSVKEFVEACKKATG-VNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
T KG+ V E + TG V +++ RP + + D SK ELNWT + T
Sbjct: 320 TWKGKGVDEV--GVENGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVT 373
Score = 68 (29.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKK 329
RD+ +D V+A + L P Y + TG+ SV+EFVEA K
Sbjct: 270 RDWGHASDYVEAMWMMLQRESPSD---YVIATGETHSVREFVEAAFK 313
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 150 (57.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
L+TG G GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI E + + A ++V + + + Y ++ TL +L+A+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+
Sbjct: 145 INSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 199
Score = 55 (24.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVE 325
RD+ D V+A L L +P + + TG+ SV+EFVE
Sbjct: 247 RDWGHAKDYVEAMWLMLQTDEPED---FVIATGEVHSVREFVE 286
Score = 39 (18.8 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 316 KGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDEL 361
+G++ E V CK+ +++ V + RP + + + D + + +L
Sbjct: 299 EGKNENE-VGRCKETGKIHVTVNHKYYRPTEVSFLQGDLTDLTGKL 343
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 86/333 (25%), Positives = 144/333 (43%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
++TG G GS+ A LL+ Y V I+ S N G ++ L + PQ G ++ Y
Sbjct: 25 VITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQN-PQTHTEGNMKLHYG 83
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI + + + A ++V + + E Y N+ TL +L+A+
Sbjct: 84 DLTDSTCLVKIINQVKPTEIYNLGAQSHV-KISFELAEYTANVDGVGTLRLLDAIKTCGL 142
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+ +
Sbjct: 143 TNSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 201
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRIS-GACFDAARGIIPGLKIRG--TDYNTADGT 280
FN P R +I G + G + + G DY A
Sbjct: 202 GILFN--HESPRRGANFVTRKISRSVAKIHLGQLESFSLGNLDSKRDWGHAKDYVEAMWL 259
Query: 281 CVRDYIDVTDLV----DAHVLALANAKPGK-VGIYNVGTGKGRSVKEFVEACKKATGVNI 335
++ + DLV + H + K K VG V GK + V C++ +++
Sbjct: 260 MLQQE-EPEDLVIATGEVHSVREFVEKSFKHVGKTIVWEGKDENE---VGRCQETGVIHV 315
Query: 336 KVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
KV+ RP + + D +K +L W A+ T
Sbjct: 316 KVDSKYYRPTEVEYLQGDSTKALTKLGWKAKIT 348
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 131 (51.2 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 54/195 (27%), Positives = 90/195 (46%)
Query: 52 VLVTGGAGYIGSHAALRLLKDS--YRVTIVDNLSRG----NMGAVKVLQELFPQPGQLQF 105
++VTGGAG+IGS+ ++ L D + +VDNL G N+ + + + + +Q
Sbjct: 2 IIVTGGAGFIGSNI-VKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI 60
Query: 106 IYAD-LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA 164
+ + GD +A IF E A + + Y+ ++ + Y S L L
Sbjct: 61 MAGEEFGDVEA---IFHEGACSSTTEWDG-KYMMDNNYQ----Y----SKEL--LHYCLE 106
Query: 165 HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
++ L Y+S+ ATYG I +KP+N YG +K + ++ + N ++
Sbjct: 107 REIPFL-YASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGF 165
Query: 225 RYFNVIGSDPEGRLG 239
RYFNV G EG G
Sbjct: 166 RYFNVYGPR-EGHKG 179
Score = 72 (30.4 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEA 326
RD++ V D+ D ++ L N G GI+N+GTG+ S + +A
Sbjct: 209 RDFVYVGDVADVNLWFLEN---GVSGIFNLGTGRAESFQAVADA 249
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 88/333 (26%), Positives = 142/333 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
L+TG G GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI E + + A ++V + + + Y ++ TL +L+A+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+ +
Sbjct: 145 INSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTAD 278
FN P R +I G CF G + + G DY A
Sbjct: 204 GILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAM 259
Query: 279 GTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV 333
++ D++ T V + V +G V GK + V CK+ V
Sbjct: 260 WLMLQNDEPEDFVIATGEVHS-VREFVEKSFMHIGKTIVWEGKNENE---VGRCKETGKV 315
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
++ V+ RP + + D SK + +LNW R
Sbjct: 316 HVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPR 348
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 162 (62.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 87/333 (26%), Positives = 142/333 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
L+TG G GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI E + + A ++V + + + Y ++ TL +L+A+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+ +
Sbjct: 145 INSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTAD 278
FN P R +I G CF G + + G DY A
Sbjct: 204 GILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAM 259
Query: 279 GTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV 333
++ D++ T V + V +G V GK + V CK+ +
Sbjct: 260 WLMLQNDEPEDFVIATGEVHS-VREFVEKSFMHIGKTIVWEGKNENE---VGRCKETGKI 315
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
++ V+ RP + + D SK + +LNW R
Sbjct: 316 HVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPR 348
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 162 (62.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 87/333 (26%), Positives = 142/333 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
L+TG G GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI E + + A ++V + + + Y ++ TL +L+A+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAIKTCGL 144
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+ +
Sbjct: 145 INSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTAD 278
FN P R +I G CF G + + G DY A
Sbjct: 204 GILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAM 259
Query: 279 GTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV 333
++ D++ T V + V +G V GK + V CK+ +
Sbjct: 260 WLMLQNDEPEDFVIATGEVHS-VREFVEKSFMHIGKTIVWEGKNENE---VGRCKETGKI 315
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
++ V+ RP + + D SK + +LNW R
Sbjct: 316 HVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPR 348
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 87/333 (26%), Positives = 142/333 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
L+TG G GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI E + + A ++V + + + Y ++ TL +L+A+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGL 144
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+ +
Sbjct: 145 INSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTAD 278
FN P R +I G CF G + + G DY A
Sbjct: 204 GILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAM 259
Query: 279 GTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV 333
++ D++ T V + V +G V GK + V CK+ V
Sbjct: 260 WLMLQNDEPEDFVIATGEVHS-VREFVEKSFMHIGKTIVWEGKNENE---VGRCKETGKV 315
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
++ V+ RP + + D +K + +LNW R
Sbjct: 316 HVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPR 348
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 160 (61.4 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 87/333 (26%), Positives = 142/333 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
L+TG G GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI E + + A ++V + + + Y ++ TL +L+A+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGL 144
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+ +
Sbjct: 145 INSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTAD 278
FN P R +I G CF G + + G DY A
Sbjct: 204 GILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAM 259
Query: 279 GTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV 333
++ D++ T V + V +G V GK + V CK+ V
Sbjct: 260 WLMLQNDEPEDFVIATGEVHS-VREFVEKSFLHIGKTIVWEGKNENE---VGRCKETGKV 315
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
++ V+ RP + + D +K + +LNW R
Sbjct: 316 HVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPR 348
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 160 (61.4 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 87/333 (26%), Positives = 142/333 (42%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYA 108
L+TG G GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYG 85
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--- 164
DL D+ + KI E + + A ++V + + + Y ++ TL +L+A+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGL 144
Query: 165 -HKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
+ VK +ST YG+ ++P E+TP P +PYG AK + I+++F + N+ +
Sbjct: 145 INSVK-FYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTAD 278
FN P R +I G CF G + + G DY A
Sbjct: 204 GILFN--HESPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAM 259
Query: 279 GTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV 333
++ D++ T V + V +G V GK + V CK+ V
Sbjct: 260 WLMLQNDEPEDFVIATGEVHS-VREFVEKSFLHIGKTIVWEGKNENE---VGRCKETGKV 315
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
++ V+ RP + + D +K + +LNW R
Sbjct: 316 HVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPR 348
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 58/199 (29%), Positives = 96/199 (48%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSY---RVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIY 107
+ L+TGGAG+IGS+ L D Y T +D LS + L ++ QP +F+
Sbjct: 11 YALITGGAGFIGSNF-LDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPN-FRFLE 68
Query: 108 ADLG-DAKAVNKIFAE----NAFDAVMHFAAVAYVGESTLEPLRYY-HNI--TSNTLVIL 159
DL + K + + E N +++FAA + V S ++PL + +NI T N L +
Sbjct: 69 MDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECV 128
Query: 160 EAMAAHKVK-----TLIYSSTCATYGEPDK-MPITESTPQKPINPYGKAKKMSEDIIID- 212
+ K + ++ ST YGE D+ + E + P +PY A K + D+II
Sbjct: 129 RILLGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYA-ASKAAVDLIIQS 187
Query: 213 FSKTTNMAVMILRYFNVIG 231
+ + ++V ++R NV G
Sbjct: 188 YRYSYKISVTVIRANNVYG 206
>UNIPROTKB|E2RC02 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070401 "NADP+ binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0005622 GO:GO:0070401 GO:GO:0019673
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:DAIRDWG EMBL:AAEX03017462 Ensembl:ENSCAFT00000014648
Uniprot:E2RC02
Length = 300
Score = 134 (52.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 49/167 (29%), Positives = 83/167 (49%)
Query: 62 GSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYADLGDAKAVN 117
GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y DL D+ +
Sbjct: 7 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 65
Query: 118 KIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA----HKVKTLIY 172
KI E + + A ++V + + + Y ++ TL +L+A+ + VK
Sbjct: 66 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK-FYQ 123
Query: 173 SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+ST YG+ ++P E+TP P +PYG AK + I+++F + N+
Sbjct: 124 ASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 170
Score = 61 (26.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVE 325
RD+ D V+A L L N +P + + TG+ SV+EFVE
Sbjct: 218 RDWGHAKDYVEAMWLMLQNDEPED---FVIATGEVHSVREFVE 257
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 50/184 (27%), Positives = 90/184 (48%)
Query: 52 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYAD 109
++V+GGAG+IG H ++K ++ T +D L+ + A ++ E +F++ D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYAS-NATEI--ENLKSFSNFEFVHLD 65
Query: 110 LGD-AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH-KV 167
L D + + KI +N D +++FAA + V S +P+ + N T +LE + +
Sbjct: 66 LSDNLEYLLKI-TKNTTD-IINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSI 123
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYF 227
++ ST YG+ + E+ P NPY +K + II + + + + ILR
Sbjct: 124 GYFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILRPN 183
Query: 228 NVIG 231
NV G
Sbjct: 184 NVYG 187
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 50/184 (27%), Positives = 90/184 (48%)
Query: 52 VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYAD 109
++V+GGAG+IG H ++K ++ T +D L+ + A ++ E +F++ D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYAS-NATEI--ENLKSFSNFEFVHLD 65
Query: 110 LGD-AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH-KV 167
L D + + KI +N D +++FAA + V S +P+ + N T +LE + +
Sbjct: 66 LSDNLEYLLKI-TKNTTD-IINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSI 123
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYF 227
++ ST YG+ + E+ P NPY +K + II + + + + ILR
Sbjct: 124 GYFLHISTDEVYGDVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILRPN 183
Query: 228 NVIG 231
NV G
Sbjct: 184 NVYG 187
>FB|FBgn0036997 [details] [associations]
symbol:CG5955 species:7227 "Drosophila melanogaster"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF EMBL:AY058410
RefSeq:NP_649230.1 UniGene:Dm.4281 SMR:Q9VPE8 STRING:Q9VPE8
EnsemblMetazoa:FBtr0078197 GeneID:40268 KEGG:dme:Dmel_CG5955
UCSC:CG5955-RA FlyBase:FBgn0036997 InParanoid:Q9VPE8
OrthoDB:EOG4VT4CZ GenomeRNAi:40268 NextBio:817884 Uniprot:Q9VPE8
Length = 367
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 61/197 (30%), Positives = 96/197 (48%)
Query: 43 PRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQ 102
PR E +L+TGG G +G A +LL+ Y N+ ++ +K Q + + G
Sbjct: 40 PR-ESRPPKILITGGLGQLGIECA-KLLRTQYGS---QNVILSDI--IKPSQSVL-ENGP 91
Query: 103 LQFIYADLGDAKAVNKIFAENAFDAVMHFAAV-AYVGESTLEPLRYYHNITSNTLVILEA 161
+I+AD+ D K + KI ++ D ++HF+A+ + VGE + PL NI VI E
Sbjct: 92 --YIFADILDFKGLQKIVVDHRIDWLIHFSALLSAVGEQNV-PLAVRVNIEGVHNVI-EL 147
Query: 162 MAAHKVKTLIYSSTCATYGEPD--KMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+K++ + ST +G PD + P T Q+P YG +K +E I + +
Sbjct: 148 AKQYKLRIFV-PSTIGAFG-PDSPRNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGL 205
Query: 220 AVMILRYFNVIGSDPEG 236
LR+ VI SDP G
Sbjct: 206 DFRCLRFPGVISSDPPG 222
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 128 (50.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 46/156 (29%), Positives = 68/156 (43%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQPGQLQFI-YADL 110
L+TG G GS+ A LL Y V ++ S N + L QPG F+ Y DL
Sbjct: 5 LITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYGDL 64
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D + + + D V + AA ++V S EP+ ++ +LEA+ +V
Sbjct: 65 IDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRVHCR 124
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMS 206
Y ++ + P E TP P +PYG AK S
Sbjct: 125 FYQASSSEMFGASPPPQNELTPFYPRSPYGAAKVYS 160
Score = 67 (28.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 282 VRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVN----IKV 337
VRD+ + V+ L +P + + TG+G +V+EF A + G++ +K
Sbjct: 220 VRDWGYAPEYVEGMWRMLQTDEPDD---FVLATGRGFTVREFARAAFEHAGLDWQQYVKF 276
Query: 338 EYLSRRPGDYAEVYSDPSKIRDELNWTA 365
+ RP + + D +K + L W A
Sbjct: 277 DQRYLRPTEVDSLIGDATKAAELLGWRA 304
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 151 (58.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 51/196 (26%), Positives = 90/196 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTGGAG+IGSH RLL+ + V +DN G+ + L + + + I D+
Sbjct: 3 ILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFH----RFEVIRHDI- 57
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+ I E D + + A A P++ T+ +L +A ++
Sbjct: 58 ----IEPILLE--VDRIYNLACPASPVHYQYNPVKTIKTSVMGTINML-GLAKRVRARIL 110
Query: 172 YSSTCATYGEPDKMPITESTPQKPINP------YGKAKKMSEDIIIDFSKTTNMAVMILR 225
+ST YG+P P ES +NP Y + K+++E +++D+ + + + I R
Sbjct: 111 QASTSEVYGDPTIHPQPESYWGN-VNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIAR 169
Query: 226 YFNVIG---SDPEGRL 238
FN G ++ +GR+
Sbjct: 170 IFNTYGPRMAEHDGRV 185
>UNIPROTKB|F1RX12 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0070401 "NADP+ binding" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:CT961043 EMBL:CU302446 EMBL:CU682457
RefSeq:XP_003128195.3 Ensembl:ENSSSCT00000001084 GeneID:100520846
KEGG:ssc:100520846 Uniprot:F1RX12
Length = 350
Score = 129 (50.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 48/166 (28%), Positives = 81/166 (48%)
Query: 62 GSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYADLGDAKAVN 117
GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y DL D+ +
Sbjct: 14 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 72
Query: 118 KIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKV--KTLIY-S 173
KI E + + A ++V + + + Y ++ TL +L+A+ + Y +
Sbjct: 73 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLIGSVRFYQA 131
Query: 174 STCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
ST YG+ + P E+TP P +PYG AK + I+++F + N+
Sbjct: 132 STSELYGKVQETPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 177
Score = 65 (27.9 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 316 KGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
+G+ E V CK++ V+++V+ RP + + D +K + +LNW R
Sbjct: 277 EGKDEHE-VGRCKESGRVHVRVDLKYYRPTEVDFLQGDCTKAKQKLNWKPR 326
Score = 56 (24.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVE 325
RD+ D V+A L L + +P + + TG+ SV+EFVE
Sbjct: 225 RDWGHAKDYVEAMWLMLQSDEPED---FVIATGEVHSVREFVE 264
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 152 (58.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 88/341 (25%), Positives = 139/341 (40%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQ----LQFIYA 108
L+TG G GS+ A LL+ Y V + R ++ + + L+ P + + Y
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKR--RSSLFNTQRVDHLYKDPHEEDVNFKLHYG 64
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKV 167
DL D+ + +I AE D V + A ++V S P Y ++ + TL +LEA+ +
Sbjct: 65 DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSP-EYTADVDAIGTLRLLEAIRFLGL 123
Query: 168 --KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
KT Y +ST YG ++P E+TP P +PY AK + I I++ ++ +
Sbjct: 124 TKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNG 183
Query: 225 RYFNVIGSDPEGRLGEA--PHPELREHGRISGACFDAA-RGIIPGLKIRG--TDYNTADG 279
FN P R GE R I+ G + L+ G DY
Sbjct: 184 ILFN--HESP--RRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQW 239
Query: 280 TCV-----RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEAC--KKATG 332
+ RD++ T V V + ++GI GKG K V++ KA
Sbjct: 240 MMLQQDEPRDFVIATG-VQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 333 VNI-----KVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
+ + V+ RP + + DPS + EL W T
Sbjct: 299 IKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEIT 339
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 152 (58.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 88/341 (25%), Positives = 139/341 (40%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQ----LQFIYA 108
L+TG G GS+ A LL+ Y V + R ++ + + L+ P + + Y
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKR--RSSLFNTQRVDHLYKDPHEEDVNFKLHYG 64
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKV 167
DL D+ + +I AE D V + A ++V S P Y ++ + TL +LEA+ +
Sbjct: 65 DLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSP-EYTADVDAIGTLRLLEAIRFLGL 123
Query: 168 --KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
KT Y +ST YG ++P E+TP P +PY AK + I I++ ++ +
Sbjct: 124 TKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNG 183
Query: 225 RYFNVIGSDPEGRLGEA--PHPELREHGRISGACFDAA-RGIIPGLKIRG--TDYNTADG 279
FN P R GE R I+ G + L+ G DY
Sbjct: 184 ILFN--HESP--RRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQW 239
Query: 280 TCV-----RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEAC--KKATG 332
+ RD++ T V V + ++GI GKG K V++ KA
Sbjct: 240 MMLQQDEPRDFVIATG-VQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPA 298
Query: 333 VNI-----KVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
+ + V+ RP + + DPS + EL W T
Sbjct: 299 IKVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEIT 339
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 153 (58.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 55/186 (29%), Positives = 80/186 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
V+VTGGAG++GSH RL+ V +VDN G V F P + I D+
Sbjct: 121 VVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENV---MHHFSNPN-FEMIRHDV- 175
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
V I E D + H A A P++ TL +L +A +
Sbjct: 176 ----VEPILLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGARFL 228
Query: 172 YSSTCATYGEPDKMPITESTPQKPINP------YGKAKKMSEDIIIDFSKTTNMAVMILR 225
+ST YG+P + P E T +NP Y + K+ +E + +D+ + N+ V I R
Sbjct: 229 LTSTSEVYGDPLQHPQVE-TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIAR 287
Query: 226 YFNVIG 231
FN G
Sbjct: 288 IFNTYG 293
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 115 (45.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQ-ELFPQPGQLQFIYAD 109
VL+TG G GS+ + LL+ Y+V I+ S N + L + +L+ Y D
Sbjct: 7 VLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRLHYGD 66
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
L D + +I + + + A ++V S P ++ TL +LEA+ ++ +T
Sbjct: 67 LTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIRDYQHRT 126
Query: 170 LI----YSS-TCATYGEPDKMPITESTPQKPINPYGKAK 203
I Y + + +G+ ++P E+TP P +PY AK
Sbjct: 127 GIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAK 165
Score = 79 (32.9 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 29/94 (30%), Positives = 43/94 (45%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIK--VEYL 340
RD+ D V A L +P Y V TG+ VKEF+E +N + V +
Sbjct: 229 RDWGYAKDYVRAMWAMLQQEQPDD---YVVATGETHEVKEFLEIAFGYVNLNWQNYVAFD 285
Query: 341 SR--RPGDYAEVYSDPSKIRDELNW--TARFTDL 370
R RP + + DP+K + +L W + FT+L
Sbjct: 286 ERYLRPAEVDLLIGDPAKTKAQLGWEPSVTFTEL 319
>ASPGD|ASPL0000035041 [details] [associations]
symbol:AN3119 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 RefSeq:XP_660723.1
ProteinModelPortal:Q5B8L1 EnsemblFungi:CADANIAT00009957
GeneID:2873998 KEGG:ani:AN3119.2 HOGENOM:HOG000218208 OMA:WFASPRS
OrthoDB:EOG41NXW0 Uniprot:Q5B8L1
Length = 316
Score = 145 (56.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 56/189 (29%), Positives = 88/189 (46%)
Query: 51 HVLVTGGAGYIGSHAALRLLKD-SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYAD 109
H+L+TG AG+IG A LL D SY + + D VK +PQ + + AD
Sbjct: 2 HILITGAAGFIGQLLARELLNDPSYTLVLTDINEPPIPAGVK-----YPQNART--VTAD 54
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
L KA + + + + DAV F + G L N+ + T +LEA+ A
Sbjct: 55 L--VKAADTV-VDKSLDAVYAFHGIMSSGSEANFDLGMTVNVDA-TRKLLEALRATCPGV 110
Query: 170 -LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFN 228
+IYSS+ A YG+P + ++ P + YG K + E ++ ++++ + LR F
Sbjct: 111 RVIYSSSQAVYGQPLPEVVDDTVIPTPQSSYGAEKLICETLVNEYTRRGFITGFTLR-FP 169
Query: 229 VIGSDPEGR 237
I P GR
Sbjct: 170 TISVRP-GR 177
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 88/335 (26%), Positives = 138/335 (41%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVL-QELFPQPGQLQFI--YA 108
L+TG +G GS+ A LL Y+V I+ S N ++ L G F Y
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKV 167
D+ D+ + K+ + V H AA ++V S P Y + + TL +L+A+ A ++
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHACRL 172
Query: 168 --KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
K Y +ST YG+ ++P +E TP P +PY AK I++++ + NM
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYNMFACNG 232
Query: 225 RYFNVIGSDPEGRLGEA--PHPELREHGRIS-GACFDAARGIIPGLKIRG--TDYNTADG 279
FN P R GE R +IS G G + L+ G +Y A
Sbjct: 233 ILFN--HESP--RRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMW 288
Query: 280 TCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV- 333
++ D++ T V N ++G V +G V+E K GV
Sbjct: 289 RILQHDSPDDFVIATGK-QFSVREFCNLAFAEIG--EVLQWEGEGVEE---VGKNKDGVI 342
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
+KV RP + + + K + L W A+ T
Sbjct: 343 RVKVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVT 377
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 88/335 (26%), Positives = 138/335 (41%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVL-QELFPQPGQLQFI--YA 108
L+TG +G GS+ A LL Y+V I+ S N ++ L G F Y
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKV 167
D+ D+ + K+ + V H AA ++V S P Y + + TL +L+A+ A ++
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHACRL 172
Query: 168 --KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMIL 224
K Y +ST YG+ ++P +E TP P +PY AK I++++ + NM
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVNYREAYNMFACNG 232
Query: 225 RYFNVIGSDPEGRLGEA--PHPELREHGRIS-GACFDAARGIIPGLKIRG--TDYNTADG 279
FN P R GE R +IS G G + L+ G +Y A
Sbjct: 233 ILFN--HESP--RRGETFVTRKITRSVAKISLGQQESIELGNLSALRDWGHAREYVEAMW 288
Query: 280 TCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGV- 333
++ D++ T V N ++G V +G V+E K GV
Sbjct: 289 RILQHDSPDDFVIATGK-QFSVREFCNLAFAEIG--EVLQWEGEGVEE---VGKNKDGVI 342
Query: 334 NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
+KV RP + + + K + L W A+ T
Sbjct: 343 RVKVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVT 377
>UNIPROTKB|Q5QPP9 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR005886 HOGENOM:HOG000168001 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
SMR:Q5QPP9 Ensembl:ENST00000456977 Uniprot:Q5QPP9
Length = 108
Score = 125 (49.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 309 IYNVGTGKGR--SVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTAR 366
I+ V KG ++++ E C G I + ++RR GD A Y++PS ++EL WTA
Sbjct: 28 IHVVDLAKGHIAALRKLKEQC----GCRIPYKVVARREGDVAACYANPSLAQEELGWTAA 83
Query: 367 FTDLQGSLQIAWRWQKTHINGYGSR 391
L + WRWQK + +G+G++
Sbjct: 84 L-GLDRMCEDLWRWQKQNPSGFGTQ 107
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 267 LKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAK 303
L + G DY+T DGT VRDYI V DL H+ AL K
Sbjct: 9 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK 45
>UNIPROTKB|E9PI88 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GO:GO:0019673 EMBL:AL034344 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AL033517 EMBL:AL035693 EMBL:AL137179
EMBL:AL158139 RefSeq:NP_001240775.1 UniGene:Hs.144496
UniGene:Hs.660919 GeneID:2762 KEGG:hsa:2762 CTD:2762 HGNC:HGNC:4369
ChiTaRS:GMDS GenomeRNAi:2762 EMBL:AL354670 EMBL:AL451141
EMBL:AL591048 IPI:IPI00642048 ProteinModelPortal:E9PI88 SMR:E9PI88
Ensembl:ENST00000530927 UCSC:uc021ykn.1 ArrayExpress:E9PI88
Bgee:E9PI88 Uniprot:E9PI88
Length = 342
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 83/324 (25%), Positives = 137/324 (42%)
Query: 62 GSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYADLGDAKAVN 117
GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y DL D+ +
Sbjct: 6 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 64
Query: 118 KIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA----HKVKTLIY 172
KI E + + A ++V + + + Y ++ TL +L+A+ + VK
Sbjct: 65 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK-FYQ 122
Query: 173 SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGS 232
+ST YG+ ++P E+TP P +PYG AK + I+++F + N+ + FN
Sbjct: 123 ASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFN--HE 180
Query: 233 DPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTADGTCVR---- 283
P R +I G CF G + + G DY A ++
Sbjct: 181 SPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMWLMLQNDEP 238
Query: 284 -DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
D++ T V + V +G V GK + V CK+ V++ V+
Sbjct: 239 EDFVIATGEVHS-VREFVEKSFLHIGKTIVWEGKNENE---VGRCKETGKVHVTVDLKYY 294
Query: 343 RPGDYAEVYSDPSKIRDELNWTAR 366
RP + + D +K + +LNW R
Sbjct: 295 RPTEVDFLQGDCTKAKQKLNWKPR 318
>UNIPROTKB|F6W683 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD Ensembl:ENSECAT00000001963 Uniprot:F6W683
Length = 343
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 83/324 (25%), Positives = 137/324 (42%)
Query: 62 GSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQLQFIYADLGDAKAVN 117
GS+ A LL+ Y V IV S N G ++ L + PQ G ++ Y DL D+ +
Sbjct: 7 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN-PQAHIEGNMKLHYGDLTDSTCLV 65
Query: 118 KIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA----HKVKTLIY 172
KI E + + A ++V + + + Y ++ TL +L+A+ + VK
Sbjct: 66 KIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVK-FYQ 123
Query: 173 SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGS 232
+ST YG+ ++P E+TP P +PYG AK + I+++F + N+ + FN
Sbjct: 124 ASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFN--HE 181
Query: 233 DPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--TDYNTADGTCVR---- 283
P R +I G CF G + + G DY A ++
Sbjct: 182 SPRRGANFVTRKISRSVAKIYLGQLECFSL--GNLDAKRDWGHAKDYVEAMWLMLQNDEP 239
Query: 284 -DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
D++ T V + V +G V GK + V CK+ V++ V+
Sbjct: 240 EDFVIATGEVHS-VREFVEKSFLHIGKTIVWEGKNENE---VGRCKETGKVHVTVDLRYY 295
Query: 343 RPGDYAEVYSDPSKIRDELNWTAR 366
RP + + D +K + +LNW R
Sbjct: 296 RPTEVDFLQGDCTKAKQKLNWKPR 319
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 45/188 (23%), Positives = 83/188 (44%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRG--NMGAVKVLQELFPQPGQLQFIYA 108
+V++TGG G+IGS+ + + D++ N+ + N V + + P + + +
Sbjct: 7 NVVITGGCGFIGSNF-VNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSP-RYKLVLT 64
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH-KV 167
D+ + A+ +F +N D V+HFAA E N + + LE + + K+
Sbjct: 65 DIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKI 124
Query: 168 KTLIYSSTCATYGEPD----KMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
K ++ ST YG+ D + E + P NPY K E + + N+ ++
Sbjct: 125 KRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 224 LRYFNVIG 231
R N+ G
Sbjct: 185 ARMNNIYG 192
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 142 (55.0 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 51/187 (27%), Positives = 86/187 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+LVTGGAG+IGSH +L++ + V + DN G+ +K + P + + I D+
Sbjct: 33 ILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLK---KWIGHP-RFELIRHDV 88
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
+ +F E D + H A A P++ TL +L +A +
Sbjct: 89 TEP-----LFVE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGARI 140
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINP------YGKAKKMSEDIIIDFSKTTNMAVMIL 224
+ +ST YG+P P TES +NP Y + K+++E ++ D+ + + + I
Sbjct: 141 LLTSTSEVYGDPLVHPQTESYWGN-VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 199
Query: 225 RYFNVIG 231
R FN G
Sbjct: 200 RIFNTYG 206
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 142 (55.0 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 89/345 (25%), Positives = 144/345 (41%)
Query: 33 SPDSNSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKV 92
+P ++ST PR L+TG G GS+ LL Y V + S N ++
Sbjct: 17 APKADSTVVEPRKI-----ALITGITGQDGSYLTEFLLGKGYEVHGLIRRS-SNFNTQRI 70
Query: 93 LQELFPQPGQ-----LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRY 147
++ P ++ YADL DA ++ + D V + AA ++V S P
Sbjct: 71 -NHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYT 129
Query: 148 YHNITSNTLVILEAMAAHKV---KTLIY--SSTCATYGEPDKMPITESTPQKPINPYGKA 202
+ + L +LEA+ +H + +T+ Y + + +G P +E+TP P +PY +
Sbjct: 130 ADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAAS 188
Query: 203 KKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARG 262
K + +++ + + FN P R GE + R+ R G
Sbjct: 189 KCAAHWYTVNYREAYGLFACNGILFN--HESP--RRGE--NFVTRKITRALGR------- 235
Query: 263 IIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKE 322
I GL+ T + RD+ D V+A L L KP Y V T +G +V+E
Sbjct: 236 IKVGLQ---TKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDD---YVVATEEGHTVEE 289
Query: 323 FVEACKKATGVNIK--VEYLSR--RPGDYAEVYSDPSKIRDELNW 363
F++ G+N K VE R RP + + D SK ++ L W
Sbjct: 290 FLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGW 334
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 141 (54.7 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 90/344 (26%), Positives = 138/344 (40%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVK-VLQELFPQPGQLQFIYADL 110
L+TG G GS+ A LL+ Y V I S N V + Q+ + Y DL
Sbjct: 6 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 65
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMA--AHKV 167
D + +I E D V + A+++V S P Y ++ + TL +LEA+ +
Sbjct: 66 SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEAIRFLGLEK 124
Query: 168 KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRY 226
KT Y +ST YG ++P E+TP P +PY AK + I +++ ++ M
Sbjct: 125 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGIL 184
Query: 227 FNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYI 286
FN P R GE +I+ A + A+G+ L + D + D +DY+
Sbjct: 185 FN--HESP--RRGETFVTR-----KITRAIANIAQGLESCLYLGNMD-SLRDWGHAKDYV 234
Query: 287 DVT----------DLVDA-----HVLALANAKPGKVGIYNVGTGKGRSVKEFVEACK--K 329
+ D V A V ++GI G G K V +
Sbjct: 235 KMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHD 294
Query: 330 ATGVN-----IKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
A GV I V+ RP + + DP+K ++L W T
Sbjct: 295 APGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEIT 338
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/195 (27%), Positives = 91/195 (46%)
Query: 51 HVLVTGGAGYIGSH--AALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
H ++ GG G++G+H +AL+ + R+ +VD + +K+ + +I A
Sbjct: 3 HYVIVGGGGFLGAHVISALQKIGCKERIIVVDPCPQ-EFKTIKI------DKSNISYIKA 55
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSN-TLVILEAMAAHKV 167
D K + I N AV+H AAV + G + + HN N T +++ A V
Sbjct: 56 SFLDDKVLENIL--NGASAVVHLAAVGHTGLIAGDR-KSVHNFNVNGTKQLIKQCKALGV 112
Query: 168 KTLIYSSTCAT--YGEP-DKMPITESTP----QKPINPYGKAKKMSEDIIIDFSKTTNMA 220
K +Y+S+ A GEP D +TE P +K ++ Y +K +E ++ S T +
Sbjct: 113 KRFLYASSVAVSFIGEPLDN--VTEDDPLPDPKKYLDFYSASKAEAETYVLSQS-TPDFK 169
Query: 221 VMILRYFNVIG-SDP 234
+ LR+ + G DP
Sbjct: 170 TVCLRFRGIYGPEDP 184
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 87/338 (25%), Positives = 138/338 (40%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP----GQLQFI- 106
L+TG G GS+ A LL Y+V I+ S N + + L+ P G F
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARI---EHLYGNPVTHNGSASFSL 93
Query: 107 -YADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA 164
Y D+ D+ + K+ + + H AA ++V S P Y + + TL +L+A+ A
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHA 152
Query: 165 HKV--KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
++ K Y +ST YG+ ++P +E TP P +PY AK I++++ + M
Sbjct: 153 CRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNYREAYKMFA 212
Query: 222 MILRYFNVIGSDPEGRLGEA--PHPELREHGRISGACFDAAR-GIIPGLKIRG--TDYNT 276
FN P R GE R +IS + G + L+ G +Y
Sbjct: 213 CNGILFN--HESP--RRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVE 268
Query: 277 ADGTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKAT 331
A ++ D++ T V N ++G V G+G E K
Sbjct: 269 AMWRILQQDTPDDFVIATGK-QFSVREFCNLAFAEIGEQLVWEGEGVD-----EVGKNQD 322
Query: 332 GV-NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
GV +KV RP + + +P+K R L W + T
Sbjct: 323 GVVRVKVSPKYYRPTEVETLLGNPAKARKTLGWEPKIT 360
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 87/338 (25%), Positives = 138/338 (40%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP----GQLQFI- 106
L+TG G GS+ A LL Y+V I+ S N + + L+ P G F
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARI---EHLYGNPVTHNGSASFSL 93
Query: 107 -YADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA 164
Y D+ D+ + K+ + + H AA ++V S P Y + + TL +L+A+ A
Sbjct: 94 HYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIHA 152
Query: 165 HKV--KTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
++ K Y +ST YG+ ++P +E TP P +PY AK I++++ + M
Sbjct: 153 CRLTEKVRFYQASTSELYGKVQEIPQSELTPFYPRSPYAVAKMYGYWIVVNYREAYKMFA 212
Query: 222 MILRYFNVIGSDPEGRLGEA--PHPELREHGRISGACFDAAR-GIIPGLKIRG--TDYNT 276
FN P R GE R +IS + G + L+ G +Y
Sbjct: 213 CNGILFN--HESP--RRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWGHAKEYVE 268
Query: 277 ADGTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKAT 331
A ++ D++ T V N ++G V G+G E K
Sbjct: 269 AMWRILQQDTPDDFVIATGK-QFSVREFCNLAFAEIGEQLVWEGEGVD-----EVGKNQD 322
Query: 332 GV-NIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
GV +KV RP + + +P+K R L W + T
Sbjct: 323 GVVRVKVSPKYYRPTEVETLLGNPAKARKTLGWEPKIT 360
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 111 (44.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 43/175 (24%), Positives = 83/175 (47%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQ---ELFPQPGQLQFIYA 108
L+TG G GS+ L+ Y V I+ + VK + ++ + L Y
Sbjct: 9 LITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLTLHYG 68
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAA--H 165
DL DA ++ I ++ + + A ++V S + Y ++ L +L+A+ +
Sbjct: 69 DLTDASNLHSIVSKVNPTEIYNLGAQSHVKVS-FDMSEYTGDVDGLGCLRLLDAIRSCGM 127
Query: 166 KVKTLIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+ K Y +ST YG+ ++P +E+TP P +PY AK+ + I++++ + +M
Sbjct: 128 EKKVKYYQASTSELYGKVQEIPQSETTPFYPRSPYAVAKQYAYWIVVNYREAYDM 182
Score = 69 (29.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
RD+ D V+A L L KP + + TG+ SV+EFVE K + IK +
Sbjct: 230 RDWGHARDYVEAMWLMLQQEKPED---FVIATGETHSVREFVEKSFKEIDIIIKWRGEAE 286
Query: 343 RPGDYAE 349
+ Y E
Sbjct: 287 KEEGYCE 293
Score = 52 (23.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 316 KGRSVKEFVEA-CKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNW 363
+G + KE E C+K V +K++ RP + + +P+K + L W
Sbjct: 282 RGEAEKE--EGYCEKTGKVYVKIDEKYYRPTEVDLLLGNPNKAKKLLQW 328
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 82/355 (23%), Positives = 143/355 (40%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTGGAG+IGS A +R+L + ++V N + + + F+ AD+
Sbjct: 3 ILVTGGAGFIGS-ALVRMLIEQTE-SVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEA---------M 162
D + ++ + D +MH AA ++V S P + T +LEA
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120
Query: 163 AAHKVKTLIYSSTCATYGEPDKMPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAV 221
A + L + ST +G + + +E++ P +PY +K ++ ++ + +T + +
Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYALPI 180
Query: 222 MILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTC 281
+I N G +PE +S A P L I G +G
Sbjct: 181 VITNCSN--------NYGPFQYPEKLIPLMVSNALQSK-----P-LPIYG------NGQQ 220
Query: 282 VRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRS-----------VKEFVEACKKA 330
VRD++ V D V A L + G+ YN+G ++ ++E V ++
Sbjct: 221 VRDWLYVDDHVKALYLVATQGQLGQT--YNIGGSCEQTNLTVVRHICSLLEELVPTHPQS 278
Query: 331 -----TGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
G ++Y+ RPG D SKI+ EL W + + L+ W
Sbjct: 279 LAMGNAGFADLIQYVVDRPGHDVRYAIDASKIQRELGWRPQ-ESFESGLRKTVEW 332
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 57/191 (29%), Positives = 82/191 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTG GYIGS +LL Y V VD R G+ K+ Q P L+ I D+
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVD---RFYFGSDKLSQH----P-HLELINEDV- 56
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAY-----VGESTLEPLRYYHNITSNTLVILEAMAAHK 166
+ +F D V+ AAV+ + E + + + S TL K
Sbjct: 57 -RRLQPSLFTN--VDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLA-----KQQK 108
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRY 226
VK I S+C+ YG K + E+ P+ Y KA + +E I+ + T + V ++R
Sbjct: 109 VKRYILPSSCSIYGF-QKGAVDETAKTNPLTTYAKANEKAEKEILPLA-TDDFTVTVMRQ 166
Query: 227 FNVIGSDPEGR 237
V G P R
Sbjct: 167 ATVYGYSPRMR 177
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/215 (26%), Positives = 91/215 (42%)
Query: 166 KVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
KVK I S+C+ YG K + E+ P+ Y KA + +E I+ + T + V ++R
Sbjct: 108 KVKRYILPSSCSIYGF-QKGAVDETAKTNPLTTYAKANEKAEKEILPLA-TDDFTVTVMR 165
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
V G P R +L +G + GA D IP ++ DGT R
Sbjct: 166 QATVYGYSPRMRF------DLAINGMVYGAWEDKC---IPLMR---------DGTQYRPM 207
Query: 286 IDVTDLVDAHVLAL-ANAKPGKVGIYNVGTGKGR-SVKEFVEACKKATGVNIKVEYLSRR 343
+ V D D VL L A+A I NVG + ++ + + G + +
Sbjct: 208 VHVQDTTDVMVLLLQADASEINGQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEW 267
Query: 344 PGD--YAEVYSDPSKIRDELNWTARFTDLQGSLQI 376
GD + Y KI+ LNW ++ +G++++
Sbjct: 268 YGDPDHRSYYVSFDKIKRILNWQPQWDAAKGAVEL 302
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 57/191 (29%), Positives = 82/191 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTG GYIGS +LL Y V VD R G+ K+ Q P L+ I D+
Sbjct: 6 VLVTGAGGYIGSVLVPKLLNKGYHVKAVD---RFYFGSDKLSQH----P-HLELINEDV- 56
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAY-----VGESTLEPLRYYHNITSNTLVILEAMAAHK 166
+ +F D V+ AAV+ + E + + + S TL K
Sbjct: 57 -RRLQPSLFTN--VDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLA-----KQQK 108
Query: 167 VKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRY 226
VK I S+C+ YG K + E+ P+ Y KA + +E I+ + T + V ++R
Sbjct: 109 VKRYILPSSCSIYGF-QKGAVDETAKTNPLTTYAKANEKAEKEILPLA-TDDFTVTVMRQ 166
Query: 227 FNVIGSDPEGR 237
V G P R
Sbjct: 167 ATVYGYSPRMR 177
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/215 (26%), Positives = 91/215 (42%)
Query: 166 KVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
KVK I S+C+ YG K + E+ P+ Y KA + +E I+ + T + V ++R
Sbjct: 108 KVKRYILPSSCSIYGF-QKGAVDETAKTNPLTTYAKANEKAEKEILPLA-TDDFTVTVMR 165
Query: 226 YFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDY 285
V G P R +L +G + GA D IP ++ DGT R
Sbjct: 166 QATVYGYSPRMRF------DLAINGMVYGAWEDKC---IPLMR---------DGTQYRPM 207
Query: 286 IDVTDLVDAHVLAL-ANAKPGKVGIYNVGTGKGR-SVKEFVEACKKATGVNIKVEYLSRR 343
+ V D D VL L A+A I NVG + ++ + + G + +
Sbjct: 208 VHVQDTTDVMVLLLQADASEINGQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEW 267
Query: 344 PGD--YAEVYSDPSKIRDELNWTARFTDLQGSLQI 376
GD + Y KI+ LNW ++ +G++++
Sbjct: 268 YGDPDHRSYYVSFDKIKRILNWQPQWDAAKGAVEL 302
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 91/347 (26%), Positives = 143/347 (41%)
Query: 31 SLSPDSNSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAV 90
SL+ DS+ K PR LVTG G GS+ LL+ Y V + S N
Sbjct: 5 SLNGDSDIVK--PRKI-----ALVTGITGQDGSYLTEFLLEKGYEVHGLIRRS-SNFNTQ 56
Query: 91 KVLQELFPQPGQ-----LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPL 145
+ L ++ P ++ Y DL DA ++ + D V + AA ++V S P
Sbjct: 57 R-LNHIYVDPHNVNKALMKLHYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPD 115
Query: 146 RYYHNITSNTLVILEAMAAHKV---KTLIY--SSTCATYGEPDKMPITESTPQKPINPYG 200
+ + L +LEA+ +H + + + Y + + +G P +E+TP P +PY
Sbjct: 116 YTADVVATGALRLLEAVRSHNIDNGRAIKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYA 174
Query: 201 KAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAA 260
+K + +++ + + FN P R GE + R+ R G
Sbjct: 175 ASKCAAHWYTVNYREAYGLYACNGILFN--HESP--RRGE--NFVTRKITRALGR----- 223
Query: 261 RGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSV 320
I GL+ T + RD+ D V+A L L KP Y V T + +V
Sbjct: 224 --IKVGLQ---TKLFLGNIQASRDWGFAGDYVEAMWLMLQQEKPDD---YVVATEESHTV 275
Query: 321 KEFVEACKKATGVNIK--VEYLSR--RPGDYAEVYSDPSKIRDELNW 363
KEF++ G+N K VE R RP + + D SK ++ L W
Sbjct: 276 KEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKGDASKAKEMLGW 322
>UNIPROTKB|F1M864 [details] [associations]
symbol:F1M864 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
IPI:IPI00392155 Ensembl:ENSRNOT00000034578 Uniprot:F1M864
Length = 350
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 47/167 (28%), Positives = 77/167 (46%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGG GY+G L K V ++D L R +P P +FI AD+
Sbjct: 13 VLVTGGGGYLGFSLGSSLAKKGASVILLD-LRRPQ----------WPLPSGTEFIQADVR 61
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNIT-SNTLVILEAMAAHKVKTL 170
D +A+ + F D V H A+ G L+ R +I T +++ +V L
Sbjct: 62 DEEALYQAF--QGVDCVFHVASYGMSGAEKLQK-REIESINVGGTKLVINVCVRRRVPRL 118
Query: 171 IYSSTC-ATYG-EPDKMPITESTPQKPINP----YGKAKKMSEDIII 211
+Y+ST T+G +P + +S P P++ Y + K +++ +I+
Sbjct: 119 VYTSTVNVTFGGKPIEQGNEDSIPYFPLDKHMDHYSRTKAIADQLIL 165
>UNIPROTKB|F1MC60 [details] [associations]
symbol:LOC100847375 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 EMBL:DAAA02057714
IPI:IPI00716728 Ensembl:ENSBTAT00000017350 OMA:PLEKHMD
Uniprot:F1MC60
Length = 391
Score = 134 (52.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 47/166 (28%), Positives = 78/166 (46%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
V+VTGGAGY+G L K V ++D L R EL P G +FI AD+
Sbjct: 11 VVVTGGAGYLGFSLGSSLAKSGTSVILLD-LRRPQW-------ELCP--GT-EFIQADVR 59
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
+A+A+++ F D V H A+ G L+ + T ++++ +V L+
Sbjct: 60 NAEALHRTF--EGVDCVFHVASYGMSGAEQLQKEQIESINVGGTKLVIDVCVRQRVPRLV 117
Query: 172 YSSTC--ATYGEPDKMPITESTPQKPINP----YGKAKKMSEDIII 211
Y+ST A G+P + +S P P+ Y + K +++ +I+
Sbjct: 118 YTSTVNVAFGGKPIEQGDEDSVPYFPLEKHTDHYSRTKAIADQLIL 163
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 49/197 (24%), Positives = 90/197 (45%)
Query: 41 AFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQP 100
A P + + VLV GG G++GSH +R+L D Y+ + V S ++ + +E
Sbjct: 2 AKPETKFNLGSVLVVGGCGFLGSHI-VRMLLDDYKCSAV---SAVDLRCTRNRRE----- 52
Query: 101 GQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILE 160
G +Q+ AD+ +A+ + +F E D V+H A+ G S + +Y T ++E
Sbjct: 53 G-VQYHDADITNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVE 111
Query: 161 AMAAHKVKTLIYSSTCATYGE--PDKMPITESTPQ----KPINPYGKAKKMSEDIIIDFS 214
A VK L+++S+ + + D + E P K Y K +E+I++ +
Sbjct: 112 ACKKAGVKALVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKAN 171
Query: 215 KTTNMAVMILRYFNVIG 231
+ + +R + G
Sbjct: 172 EPGKLLTAAIRPSGIFG 188
>TIGR_CMR|SO_1745 [details] [associations]
symbol:SO_1745 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0016229 "steroid dehydrogenase activity"
evidence=ISS] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GO:GO:0016853 EMBL:AE014299 GenomeReviews:AE014299_GR
OMA:PQVTRYR ProtClustDB:CLSK906403 RefSeq:NP_717355.1
ProteinModelPortal:Q8EG63 GeneID:1169523 KEGG:son:SO_1745
PATRIC:23523115 BioCyc:MetaCyc:MONOMER-17300 Uniprot:Q8EG63
Length = 387
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 54/198 (27%), Positives = 89/198 (44%)
Query: 32 LSPDSNSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVK 91
LS D+ A V+H VTG G++G RL+ +VT +RG ++
Sbjct: 36 LSLDAREQTALDALAAKVSHAFVTGAGGFLGKAICQRLIAAGIKVT---GFARGRYLELE 92
Query: 92 VLQELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYV-GESTLEPLRYYHN 150
L G + + DL + + V + A D V H A+ A V G+ Y+
Sbjct: 93 AL-------G-VTMVQGDLVNPEQVKQ--AMQGCDIVFHVASKAGVWGDRD----SYFCP 138
Query: 151 ITSNTLVILEAMAAHKVKTLIYSST-CATYGEPDKMPITESTP--QKPINPYGKAKKMSE 207
++ A A K+ L+Y+ST T+ D+ I ESTP + +N Y +K ++E
Sbjct: 139 NVKGAANVIAACKALKINKLVYTSTPSVTFAGEDESGINESTPYASRFLNYYAHSKAIAE 198
Query: 208 DIIIDF--SKTTNMAVMI 223
+++D S +TN A ++
Sbjct: 199 KMMLDANQSSSTNAAYVL 216
>ASPGD|ASPL0000052066 [details] [associations]
symbol:AN0746 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:BN001308
GO:GO:0050662 GO:GO:0044237 EMBL:AACD01000012 HOGENOM:HOG000218208
OrthoDB:EOG41NXW0 RefSeq:XP_658350.1 ProteinModelPortal:Q5BFD4
EnsemblFungi:CADANIAT00001918 GeneID:2876520 KEGG:ani:AN0746.2
OMA:INEYTRR Uniprot:Q5BFD4
Length = 321
Score = 131 (51.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 48/169 (28%), Positives = 81/169 (47%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VL+TG GY+G A LL S +T+ + ++ A + + + I ADL
Sbjct: 3 VLITGAGGYVGQELASALLASSPDLTV----TLADVVAPVIPASAAQHASRTKCIQADLT 58
Query: 112 DAKAVNKIF-AENAFDAVMHFAAVAYVG-ESTLE-PLRYYHNITSNTLVILEAMAAHKVK 168
K V+++F + N +D + + G E+ E +R + T + L L A+ VK
Sbjct: 59 SPKVVDELFTSSNRYDTIYLLHGIMSSGAEANFELGMRVNFDATRDILDRLRAVQPG-VK 117
Query: 169 TLIYSSTCATYG-EPDKMPITEST-PQKPINPYGKAKKMSEDIIIDFSK 215
++++S+ A YG P I E+ P P + YG K M E ++ D+S+
Sbjct: 118 -VVFTSSLAVYGLAPKGFVIDETNFPPVPSSSYGTQKLMIELLLNDYSR 165
>WB|WBGene00017429 [details] [associations]
symbol:F13D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00390000002618 HOGENOM:HOG000167998 EMBL:FO081142
PIR:T16059 RefSeq:NP_508978.3 ProteinModelPortal:Q19391 SMR:Q19391
PaxDb:Q19391 EnsemblMetazoa:F13D11.4.1 EnsemblMetazoa:F13D11.4.2
GeneID:184416 KEGG:cel:CELE_F13D11.4 UCSC:F13D11.4.1 CTD:184416
WormBase:F13D11.4 InParanoid:Q19391 OMA:ESDNERI NextBio:924666
Uniprot:Q19391
Length = 343
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/172 (29%), Positives = 85/172 (49%)
Query: 50 THVLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQPGQLQFIYA 108
T VLVTG +G+IG+H LLK+ YRV V +L+ N V+ +++L + L+ + A
Sbjct: 6 TKVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLN--NKAKVQPIKKL-DKKNHLELVEA 62
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH-KV 167
DL D+ K A D V+H A+ + + R T+ +L+A+A V
Sbjct: 63 DLLDSTCWKKAVA--GCDYVLHVASPFPI----VSDERCITTAVEGTMNVLKAIAEDGNV 116
Query: 168 KTLIYSSTCATYGE---PDKMPITES---TPQKPINPYGKAKKMSEDIIIDF 213
+ L+ +S+CA E D++ +S ++ Y K+K ++E DF
Sbjct: 117 RKLVLTSSCAAVNEGYTQDRVFDEDSWSNLESDMVDCYIKSKTLAEKAAWDF 168
>GENEDB_PFALCIPARUM|PF08_0077 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase,
putative" species:5833 "Plasmodium falciparum" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 51/171 (29%), Positives = 85/171 (49%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
L+ G G GS+ + LL+ +Y V V + R + K + +F + L Y DL D
Sbjct: 5 LIFGITGQDGSYLSELLLEKNYHVHGV--IRRCSSFNTKRIDHIFDK---LILHYGDLLD 59
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKVKTLI 171
+ + + E + + + AA ++V S P Y T+ TL ILE + KVK +
Sbjct: 60 SSNICSLICEIKPNEIYNLAAQSHVKVSFEMP-EYTTEATALGTLRILEGIRISKVKNIK 118
Query: 172 Y--SSTCATYGEPDKMPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+ +ST +G+ + PI E+TP P++PY AK + I I++ ++ NM
Sbjct: 119 FYNASTSELFGKV-QCPIQNENTPFYPVSPYAIAKLYAHYITINYRESYNM 168
>UNIPROTKB|Q8IAX4 [details] [associations]
symbol:PF08_0077 "GDP-mannose 4,6-dehydratase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006004 "fucose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005622 GO:GO:0006004
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG ProtClustDB:CLSZ2432853
EMBL:AL844507 RefSeq:XP_001349387.1 HSSP:P32054
ProteinModelPortal:Q8IAX4 SMR:Q8IAX4 EnsemblProtists:PF08_0077:mRNA
GeneID:2655276 KEGG:pfa:PF08_0077 EuPathDB:PlasmoDB:PF3D7_0813800
Uniprot:Q8IAX4
Length = 357
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 51/171 (29%), Positives = 85/171 (49%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
L+ G G GS+ + LL+ +Y V V + R + K + +F + L Y DL D
Sbjct: 5 LIFGITGQDGSYLSELLLEKNYHVHGV--IRRCSSFNTKRIDHIFDK---LILHYGDLLD 59
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILEAMAAHKVKTLI 171
+ + + E + + + AA ++V S P Y T+ TL ILE + KVK +
Sbjct: 60 SSNICSLICEIKPNEIYNLAAQSHVKVSFEMP-EYTTEATALGTLRILEGIRISKVKNIK 118
Query: 172 Y--SSTCATYGEPDKMPI-TESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
+ +ST +G+ + PI E+TP P++PY AK + I I++ ++ NM
Sbjct: 119 FYNASTSELFGKV-QCPIQNENTPFYPVSPYAIAKLYAHYITINYRESYNM 168
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 87/341 (25%), Positives = 141/341 (41%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQP---GQL----- 103
++TG G GS+ A LL Y V I+ S N G ++ L PQ G +
Sbjct: 25 IITGITGQDGSYLAELLLAKGYEVHGILRRSSSFNTGRIEHLYHN-PQTHTEGSIGATKD 83
Query: 104 --QFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITS-NTLVILE 160
+ Y DL D+ + KI E + + A ++V + + + Y ++ TL +L+
Sbjct: 84 HMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLD 142
Query: 161 AMAAHKVKTLI--Y-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT 217
A+ + + Y +ST YG+ ++P E+TP P +PYG AK + I+I+F +
Sbjct: 143 AVKTCGLTDTVRFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVINFREAY 202
Query: 218 NMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRIS-GA--CFDAARGIIPGLKIRG--T 272
N+ + FN P R +I G CF G + ++ G
Sbjct: 203 NLFAVNGILFN--HESPRRGSNFVTRKISRSVAKIHLGQLECFSL--GNLDSMRDWGHAK 258
Query: 273 DYNTADGTCVR-----DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEAC 327
DY A ++ D++ T V + V VG V GK KE V C
Sbjct: 259 DYVEAMWLMLQQEEPVDFVIATGEVHS-VREFVERAFKHVGKTIVWEGKDE--KE-VGRC 314
Query: 328 KKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFT 368
++ ++++V+ RP + + D SK L W R T
Sbjct: 315 QETGVIHVRVDPKYYRPTEVDYLQGDSSKAFKVLGWKPRVT 355
>POMBASE|SPAC513.07 [details] [associations]
symbol:SPAC513.07 "flavonol reductase/cinnamoyl-CoA
reductase family" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 PomBase:SPAC513.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0033554 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016491 GO:GO:0044237
OrthoDB:EOG480N5D HOGENOM:HOG000167998 HSSP:Q9UUN9 PIR:T38902
RefSeq:NP_593981.1 ProteinModelPortal:Q9UT59 PRIDE:Q9UT59
EnsemblFungi:SPAC513.07.1 GeneID:2543471 KEGG:spo:SPAC513.07
OMA:YDICTIN NextBio:20804483 Uniprot:Q9UT59
Length = 336
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 74/275 (26%), Positives = 119/275 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP-QPG---QLQFIY 107
VLVTG G+IG+H A +LL+ YRV RG + +++ EL PG +++F+
Sbjct: 6 VLVTGVTGFIGAHVAEQLLQAGYRV-------RGTVRSMEKADELIRLNPGLKDKIEFVI 58
Query: 108 A-DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHK 166
D+ + A + + + + + H A+ +V T + TL ILEA K
Sbjct: 59 VKDVSASNAFDGVLKD--VELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVK 116
Query: 167 -VKTLIYSSTCATYG-------------EPDKMPIT--ES-TPQKPINPYGKAKKMSEDI 209
+K ++ +S+ A G E D PIT E+ T I Y +KK++E+
Sbjct: 117 SIKRIVITSSFAAVGNFQIDPHNNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEA 176
Query: 210 IIDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHP-ELREHGRISGACFDAARGIIPGLK 268
++ K + +++ +P G HP + + S F +I G K
Sbjct: 177 AREYVKEKKPS------YDICTINPPYVYGPPIHPMKNMDSLNTSNQIFWK---LIDGSK 227
Query: 269 IRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAK 303
T + Y+DV D+ AHV AL NAK
Sbjct: 228 -EATPFYYY-------YVDVRDVAAAHVFALENAK 254
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 106 (42.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 56/190 (29%), Positives = 85/190 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
++VTGGAG IGS+ L + + +VD+L G K L +L Q+ Y D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRK--FKNLVDL-----QIAD-YMDR 53
Query: 111 GDAKAVNKIFAENAF---DAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKV 167
D A +I A + F DA+ H A + E + + + S L L ++
Sbjct: 54 DDFLA--QIMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKEL--LHYCLDREI 109
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDII----IDFSKTTNMAVMI 223
L Y+S+ ATYGE D I E + +N YG +K+ ++ + +D + I
Sbjct: 110 PFL-YASSAATYGETDTF-IEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETLSQI 167
Query: 224 --LRYFNVIG 231
RYFNV G
Sbjct: 168 TGFRYFNVYG 177
Score = 64 (27.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEA--CKKATGVNIKVEYL 340
RD++ V D+ ++ L + G GI+N GTGK S E +A G + +
Sbjct: 214 RDFVYVGDVAAVNLWFLDH---GVSGIFNCGTGKAESFNEVAKAVIAFHGRGEVETIPFP 270
Query: 341 SRRPGDYAE-VYSDPSKIR 358
G Y E +D +K+R
Sbjct: 271 DHLKGAYQEFTEADLTKLR 289
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 106 (42.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 56/190 (29%), Positives = 85/190 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYR-VTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
++VTGGAG IGS+ L + + +VD+L G K L +L Q+ Y D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRK--FKNLVDL-----QIAD-YMDR 53
Query: 111 GDAKAVNKIFAENAF---DAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKV 167
D A +I A + F DA+ H A + E + + + S L L ++
Sbjct: 54 DDFLA--QIMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKEL--LHYCLDREI 109
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDII----IDFSKTTNMAVMI 223
L Y+S+ ATYGE D I E + +N YG +K+ ++ + +D + I
Sbjct: 110 PFL-YASSAATYGETDTF-IEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETLSQI 167
Query: 224 --LRYFNVIG 231
RYFNV G
Sbjct: 168 TGFRYFNVYG 177
Score = 64 (27.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEA--CKKATGVNIKVEYL 340
RD++ V D+ ++ L + G GI+N GTGK S E +A G + +
Sbjct: 214 RDFVYVGDVAAVNLWFLDH---GVSGIFNCGTGKAESFNEVAKAVIAFHGRGEVETIPFP 270
Query: 341 SRRPGDYAE-VYSDPSKIR 358
G Y E +D +K+R
Sbjct: 271 DHLKGAYQEFTEADLTKLR 289
>UNIPROTKB|F1RPD6 [details] [associations]
symbol:SDR42E2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PLEKHMD EMBL:CU972409
Ensembl:ENSSSCT00000008592 Uniprot:F1RPD6
Length = 392
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 59/210 (28%), Positives = 93/210 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGG GY+G L K V ++D L R EL P G +FI AD+
Sbjct: 11 VLVTGGGGYLGFTLGSSLAKSGISVILLD-LRRPQW-------ELCP--GT-EFIQADVR 59
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
DA+A+++ F D V H A+ G L+ + T ++++ +V LI
Sbjct: 60 DAEALHQAF--EGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLI 117
Query: 172 YSSTCATY--GEPDKMPITESTPQKPINP----YGKAKKMSEDIIIDFSKTTNMAVMILR 225
Y+S+ G+P + +S P P+ Y + K +++ + + + T ILR
Sbjct: 118 YTSSVNVVFGGKPIEQGDEDSVPYVPLEKHMDHYSRTKAIADQLTLMANGTPLPGGGILR 177
Query: 226 YFNVIGSDPEGRLGEAPHPELREH-GRISG 254
V+ P G G PE + H R++G
Sbjct: 178 TC-VLR--PPGIYG----PEEQRHLPRVAG 200
>UNIPROTKB|Q5LVA6 [details] [associations]
symbol:SPO0796 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0050662 GO:GO:0044237 KO:K01784 RefSeq:YP_166049.1
ProteinModelPortal:Q5LVA6 GeneID:3195367 KEGG:sil:SPO0796
PATRIC:23374867 HOGENOM:HOG000237530 OMA:WDINING
ProtClustDB:CLSK835729 Uniprot:Q5LVA6
Length = 307
Score = 106 (42.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 117 NKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNI-TSNTLVILEAMAAHKVKTLIYSST 175
++I E V+H A++ G + H + T +L+A AH V+ L+ +S+
Sbjct: 53 DRIVGEVRPQVVIHLASIVTPGVARAVA----HRVDVGGTRAVLDACLAHGVRRLVVTSS 108
Query: 176 CATYG-EPDK-MPITESTPQKPINP---YGKAKKMSEDIIIDFSKTT-NMAVMILRYFNV 229
A YG D MP+ ES P + NP Y K+ E+I+ + ++ + ++LR V
Sbjct: 109 GAAYGYHADNPMPLRESDPLRG-NPEFAYADHKRQVEEILAEARQSAPQLEQVVLRVGTV 167
Query: 230 IGSDPEGRL 238
+G+ E ++
Sbjct: 168 LGAGTENQI 176
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 49 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAV 90
++ +L+TG AG +G A L L D + V D + GAV
Sbjct: 1 MSRILITGAAGMVG-RALLEEL-DEHDVFATDLVPPKATGAV 40
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 285 YIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKK 329
+I DL A +LA A A G GIYNV V + A K
Sbjct: 197 FIWTRDL--ARILARA-AGEGPAGIYNVAGDGAMGVSDLARALGK 238
>TIGR_CMR|SPO_0796 [details] [associations]
symbol:SPO_0796 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0050662 GO:GO:0044237 KO:K01784
RefSeq:YP_166049.1 ProteinModelPortal:Q5LVA6 GeneID:3195367
KEGG:sil:SPO0796 PATRIC:23374867 HOGENOM:HOG000237530 OMA:WDINING
ProtClustDB:CLSK835729 Uniprot:Q5LVA6
Length = 307
Score = 106 (42.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 35/129 (27%), Positives = 63/129 (48%)
Query: 117 NKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNI-TSNTLVILEAMAAHKVKTLIYSST 175
++I E V+H A++ G + H + T +L+A AH V+ L+ +S+
Sbjct: 53 DRIVGEVRPQVVIHLASIVTPGVARAVA----HRVDVGGTRAVLDACLAHGVRRLVVTSS 108
Query: 176 CATYG-EPDK-MPITESTPQKPINP---YGKAKKMSEDIIIDFSKTT-NMAVMILRYFNV 229
A YG D MP+ ES P + NP Y K+ E+I+ + ++ + ++LR V
Sbjct: 109 GAAYGYHADNPMPLRESDPLRG-NPEFAYADHKRQVEEILAEARQSAPQLEQVVLRVGTV 167
Query: 230 IGSDPEGRL 238
+G+ E ++
Sbjct: 168 LGAGTENQI 176
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 49 VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAV 90
++ +L+TG AG +G A L L D + V D + GAV
Sbjct: 1 MSRILITGAAGMVG-RALLEEL-DEHDVFATDLVPPKATGAV 40
Score = 48 (22.0 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 285 YIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKK 329
+I DL A +LA A A G GIYNV V + A K
Sbjct: 197 FIWTRDL--ARILARA-AGEGPAGIYNVAGDGAMGVSDLARALGK 238
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 47/193 (24%), Positives = 87/193 (45%)
Query: 46 EPGVTHVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQ 104
+P + +L++GGAG+IGSH +L++ + V + DN G+ + L++ P + +
Sbjct: 42 QPNM-RILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSK---ENLKKWIGHP-RFE 96
Query: 105 FIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAA 164
I D+ + + D + H A A P++ TL +L +A
Sbjct: 97 LIRHDVTEPLLIE-------VDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAK 148
Query: 165 HKVKTLIYSSTCATYGEPDKMPITESTPQKPINP------YGKAKKMSEDIIIDFSKTTN 218
++ +ST YG+P P ES +NP Y + K+++E ++ D+ +
Sbjct: 149 RVGARILLTSTSEVYGDPLIHPQPESYWGN-VNPIGVRSCYDEGKRVAETLMFDYHRQHG 207
Query: 219 MAVMILRYFNVIG 231
+ + I R FN G
Sbjct: 208 IEIRIARIFNTYG 220
>UNIPROTKB|A6NKP2 [details] [associations]
symbol:SDR42E2 "Putative short-chain
dehydrogenase/reductase family 42E member 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 HOGENOM:HOG000168007 EMBL:AC009019 IPI:IPI00396920
ProteinModelPortal:A6NKP2 SMR:A6NKP2 STRING:A6NKP2
PhosphoSite:A6NKP2 PRIDE:A6NKP2 Ensembl:ENST00000330898
GeneCards:GC16P022176 HGNC:HGNC:35414 neXtProt:NX_A6NKP2
InParanoid:A6NKP2 OrthoDB:EOG4QNMWF NextBio:20777820 Bgee:A6NKP2
Genevestigator:A6NKP2 Uniprot:A6NKP2
Length = 422
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VLVTGG GY+G L K V ++D + EL P+ +FI AD+
Sbjct: 36 VLVTGGGGYLGFSLGSHLAKSGTSVILLDRR--------RPQWELSPET---KFIQADVR 84
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D +A+ + F D V H A+ G L+ + T ++++ +V LI
Sbjct: 85 DEEALYRAF--EGVDCVFHVASYGMSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLI 142
Query: 172 YSSTC--ATYGEPDKMPITESTPQKPINP----YGKAKKMSEDIII 211
Y+ST A G+P + +S P P++ Y + K +++ + +
Sbjct: 143 YTSTVNVAFGGKPIEQGDEDSVPYFPLDEHVDHYSRTKAIADQLTL 188
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 46/187 (24%), Positives = 83/187 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+L++GGAG+IGSH +L++ + V + DN G+ +K + P + + I D+
Sbjct: 31 ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK---KWIGHP-RFELIRHDV 86
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
+ + D + H A A P++ TL +L +A +
Sbjct: 87 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGARI 138
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINP------YGKAKKMSEDIIIDFSKTTNMAVMIL 224
+ +ST YG+P P ES +NP Y + K+++E ++ D+ + + + I
Sbjct: 139 LLTSTSEVYGDPLIHPQPESYWGN-VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 197
Query: 225 RYFNVIG 231
R FN G
Sbjct: 198 RIFNTYG 204
>UNIPROTKB|Q60AF9 [details] [associations]
symbol:MCA0903 "Polysaccharide biosynthesis protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000257078
RefSeq:YP_113388.1 ProteinModelPortal:Q60AF9 GeneID:3103120
KEGG:mca:MCA0903 PATRIC:22605604 OMA:PIFKKQI
ProtClustDB:CLSK2765708 Uniprot:Q60AF9
Length = 615
Score = 107 (42.7 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 42/182 (23%), Positives = 79/182 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKV-LQELFPQPGQLQFIYADL 110
++VTGG G IGS ++ + S +V N+ V++ L++ FP + + D+
Sbjct: 286 IMVTGGGGSIGSELCKQIARFSPGRLVVFEHCEFNLYRVELELRQAFPDMA-IHAVLGDV 344
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
DA +V + + + H AA +V PL + EA+ + + T
Sbjct: 345 TDAASVRRAIDVHKPAIIFHAAAYKHV------PLLQQQ--------VREAVFNNVIGTR 390
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVI 230
+ YG + + I+ P N G K+ +E ++ ++ T + +R+ NV+
Sbjct: 391 TVAEVAVEYGVGEFVLISTDKAVNPTNVMGATKRAAELVVQSYNGHTATRFITVRFGNVL 450
Query: 231 GS 232
GS
Sbjct: 451 GS 452
Score = 65 (27.9 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 254 GACFDAARGIIPGLK--IR-GTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIY 310
G +A ++P + IR G R ++ + + + A A + G+V +
Sbjct: 447 GNVLGSAGSVVPLFRKQIRNGGPVTVTHPEVTRFFMTIPEACQLIMKAAATGQGGEVFVL 506
Query: 311 NVGTGK--GRSVKEFVEACKKATGVNIKVEYLSRRPGD 346
++G G ++ + K G +I +EY+ RPG+
Sbjct: 507 DMGEAVRIGYLAEQMIRLSGKRPGTDIAIEYVGLRPGE 544
>UNIPROTKB|G4N5T6 [details] [associations]
symbol:MGG_08527 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CM001234 RefSeq:XP_003716031.1
EnsemblFungi:MGG_08527T0 GeneID:2678789 KEGG:mgr:MGG_08527
Uniprot:G4N5T6
Length = 339
Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+L+TG +G IG A RLL D++RV + D ++ + P I ADL
Sbjct: 9 ILITGASGMIGPLLAARLLSTDTHRVVLTDVVA-------PTVPPSVAHPENAVCIQADL 61
Query: 111 GDAKAVNKIFAENA-FDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
+ A+ + A + A F + G L N + ++ + ++
Sbjct: 62 TNPAALEALVAASQPLTAAFVFHGIMSAGSEADPALAMRVNFDATRALLTHLASTNRGLR 121
Query: 170 LIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSK 215
++Y+S+ A YG P +T +T P YG K + E ++ D ++
Sbjct: 122 VVYASSNAVYGTPLPDLVTPATTPTPTGTYGATKYLCEVLVNDMTR 167
>DICTYBASE|DDB_G0278797 [details] [associations]
symbol:DDB_G0278797 species:44689 "Dictyostelium
discoideum" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
dictyBase:DDB_G0278797 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AAFI02000024 GO:GO:0044237
RefSeq:XP_641969.1 ProteinModelPortal:Q54XR1
EnsemblProtists:DDB0206198 GeneID:8621701 KEGG:ddi:DDB_G0278797
InParanoid:Q54XR1 OMA:TGFLGCN Uniprot:Q54XR1
Length = 410
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 50/194 (25%), Positives = 89/194 (45%)
Query: 54 VTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGDA 113
VTG G++G + +LL Y+V + + + + L Q QL + D+ +
Sbjct: 36 VTGSTGFLGCNIVEQLLIQGYQVYALYRNKNKVLELNSIAKRLNKQD-QLILVKGDVTNY 94
Query: 114 KAVNKIFAENAFDAVMHFAAV----AYVGESTL--EPLRYYHNITSNTLVILEAMAAHKV 167
K++ K + H AA+ A + ++ + ++ Y + T ++EA V
Sbjct: 95 KSLLKGIPDECLYC-FHAAALIDLDASESQQSMKEQQIQQYETNVNGTANVVEACFKKGV 153
Query: 168 KTLIYSSTCATYGEPDKMPITESTPQK--PINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
K LIY+ST A Y D++ I E P++ P + Y + K++ E + D + AV+I
Sbjct: 154 KRLIYTSTIACYDVKDRI-INEQCPKENLPRSGYSRTKRIGELYVEDAIRRGLEAVIISP 212
Query: 226 YFNVIGSDPEGRLG 239
F +IG E +G
Sbjct: 213 GF-IIGKYDENSVG 225
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 102 (41.0 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 48/202 (23%), Positives = 87/202 (43%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
L+TG G+ G + A L + Y + + GA + + G + D+ D
Sbjct: 11 LITGLEGFTGRYVADELRRSGYEI-----FGTRHSGADE------REAGCFR---VDICD 56
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMA--AHKVKTL 170
A+ ++ E + V+H AA+++V + + Y N+ T +LEA+A + + +
Sbjct: 57 LAALRRVVEEVEPEVVVHLAAISFVAHGEADAI-YRANVVG-TRNLLEALAGLSRTPRAV 114
Query: 171 IYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVI 230
+ +S+ YG I ES P N Y +K E + + + ++I R FN
Sbjct: 115 LLASSANVYGNAPVELIDESVSLAPANDYAVSKLAMEYMARLWMH--RLPIVIARPFNYT 172
Query: 231 GSDPEGRLGEAPH---PELREH 249
G +G+A H P++ H
Sbjct: 173 G------VGQASHFLIPKIVSH 188
Score = 61 (26.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 283 RDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSR 342
RD+ DV + A+V L G+V NVG+G+ S++E + +G I+V
Sbjct: 205 RDFSDVRVVALAYVRLLEVVPAGQV--VNVGSGQVVSLREVLAMMSGISGHEIEVRVNPE 262
Query: 343 --RPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWR 379
R + + D S+++ EL + T L +L+ +R
Sbjct: 263 FVRANEVKRLQGDVSRLK-ELIGGYQPTPLMETLEWMFR 300
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 74/321 (23%), Positives = 130/321 (40%)
Query: 85 GNMGAV-KVLQELFPQPGQLQFIYA-----DLGDAKAVNKIFAENAFDAVMHFAA-VAYV 137
G+ G V ++ Q G ++ + +L D++AV+ FA D V AA V +
Sbjct: 10 GHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGI 69
Query: 138 GESTLEPLRY-YHN--ITSNTLVILEAMAAHKVKTLIYSSTCATYGEPDKMPITEST--- 191
+ P + Y N I SN I+ A + V L++ + Y + K P+ ES
Sbjct: 70 VANNTYPADFIYQNMMIESN---IIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQ 126
Query: 192 -PQKPIN-PYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREH 249
+P N PY AK + +++ + N+ G P HP H
Sbjct: 127 GTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG--PHDNF----HPS-NSH 179
Query: 250 --GRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDA--HVLALA----- 300
+ +A P + + G+ GT +R+++ V D+ A HV+ LA
Sbjct: 180 VIPALLRRFHEATAQNAPDVVVWGS------GTPMREFLHVDDMAAASIHVMELAHEVWL 233
Query: 301 -NAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRD 359
N +P + NVGTG +++E + K G +V + + +P D +++
Sbjct: 234 ENTQP-MLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLH- 291
Query: 360 ELNWTARFTDLQGSLQIAWRW 380
+L W + L+ L ++W
Sbjct: 292 QLGWYHEIS-LEAGLASTYQW 311
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 106 (42.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 41/185 (22%), Positives = 81/185 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP-QPGQLQFIYADL 110
VL+ GG+G++G H + + V I R + L + F P ++QF DL
Sbjct: 8 VLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRP---LPEKLSKYFTFDPSKIQFFKGDL 64
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAY-VGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
K V+ ++ D ++H A+ + + + E + T N L + + + H VK
Sbjct: 65 TSDKDVSDAINQSKCDVIVHSASPMHGLPQEIYEKVNVQG--TKNLLSVAQKL--H-VKA 119
Query: 170 LIYSSTCAT-YGEPDKMPITESTPQKPINP--YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
L+Y+S+ + D + E+ P ++ Y + K +E+ ++ + + + LR
Sbjct: 120 LVYTSSAGVIFNGQDVINADETWPYPEVHMDGYNETKAAAEEAVMKANDNDQLRTVCLRP 179
Query: 227 FNVIG 231
+ G
Sbjct: 180 AGIFG 184
Score = 58 (25.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 261 RGIIPGL----KIRGTDYNTADGTCVRDYIDVTDLVDAHVLA 298
R ++PGL K+ + Y D + D+ V ++ DAHVLA
Sbjct: 188 RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADAHVLA 229
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 106 (42.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 41/185 (22%), Positives = 81/185 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP-QPGQLQFIYADL 110
VL+ GG+G++G H + + V I R + L + F P ++QF DL
Sbjct: 8 VLIIGGSGFLGLHLIEQFYRHCPNVAITVFDVRP---LPEKLSKYFTFDPSKIQFFKGDL 64
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAY-VGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
K V+ ++ D ++H A+ + + + E + T N L + + + H VK
Sbjct: 65 TSDKDVSDAINQSKCDVIVHSASPMHGLPQEIYEKVNVQG--TKNLLSVAQKL--H-VKA 119
Query: 170 LIYSSTCAT-YGEPDKMPITESTPQKPINP--YGKAKKMSEDIIIDFSKTTNMAVMILRY 226
L+Y+S+ + D + E+ P ++ Y + K +E+ ++ + + + LR
Sbjct: 120 LVYTSSAGVIFNGQDVINADETWPYPEVHMDGYNETKAAAEEAVMKANDNDQLRTVCLRP 179
Query: 227 FNVIG 231
+ G
Sbjct: 180 AGIFG 184
Score = 58 (25.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 261 RGIIPGL----KIRGTDYNTADGTCVRDYIDVTDLVDAHVLA 298
R ++PGL K+ + Y D + D+ V ++ DAHVLA
Sbjct: 188 RQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVADAHVLA 229
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 82/334 (24%), Positives = 134/334 (40%)
Query: 53 LVTGGAGYIGSHAALRLLKDS-YRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
L+TG G +GS A LL ++ Y V + M + L + + ++ YADL
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEP-MDNIYHLSDRINKKDRISIFYADLN 64
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D ++ K+F D + H AA +Y S P+ T ILE + K K
Sbjct: 65 DYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKD-- 122
Query: 172 YSSTCATYGEPDKMPITESTPQKPINPYGKAK---KMSEDIIIDFSKTTNMAVMILRYFN 228
Y P+ + YG+AK K++ED F + ++ +
Sbjct: 123 ------GYD-----PVVHVCSSSEV--YGRAKVGIKLNEDTT--FHGASPYSI------S 161
Query: 229 VIGSDPEGRL-GEAPH-----PELREHG--RISGACFDAARGIIPGLKIRGTDYN----- 275
IG+D GR GEA + + H R S F++ + + + T Y
Sbjct: 162 KIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFEST--VAKQIALIETGYQEPVIK 219
Query: 276 TADGTCVRDYIDVTDLVDAHVLALANAKPGKV--G-IYNVGTGKGRSVKEFVEACKK-AT 331
+ + VR + D D + A+ L ++ GKV G +N+ + + E +E +T
Sbjct: 220 VGNLSSVRTFQDARDAIRAYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEILLSFST 279
Query: 332 GVNIKVEYLSRR--PGDYAEVYSDPSKIRDELNW 363
+IK+E R P D D +KI+ +NW
Sbjct: 280 RKDIKIEQDEERLRPIDADYQMFDNTKIKSFINW 313
>DICTYBASE|DDB_G0286833 [details] [associations]
symbol:DDB_G0286833 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0006629 "lipid
metabolic process" evidence=IEA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
dictyBase:DDB_G0286833 GO:GO:0016021 GenomeReviews:CM000153_GR
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
KO:K00100 GO:GO:0006695 GO:GO:0047012 EMBL:AAFI02000090
RefSeq:XP_637518.1 ProteinModelPortal:Q54L85
EnsemblProtists:DDB0305146 GeneID:8625816 KEGG:ddi:DDB_G0286833
OMA:SIVHAKN Uniprot:Q54L85
Length = 328
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 47/189 (24%), Positives = 83/189 (43%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+V +TGG+G++G + L+ + Y+V + N KVL ++ P + + L
Sbjct: 3 NVFLTGGSGFLGKYIIEELISNGYKVFALSRSETSN----KVLSQMGATP-----VMSSL 53
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLV--ILEAMAAHKVK 168
D + + + A D V+H AA +++ L Y NI + L+ I + V
Sbjct: 54 HDEQGLTE--AIKGCDIVIHCAAKLETNSESVQEL-YKDNIDATELLFNICNQSSTSSVS 110
Query: 169 TLIYSSTCATYGEPDKMP-ITESTPQKPINP---YGKAKKMSEDIIIDF-SKTTNMAVMI 223
+ S+ + + TE TP PI Y K+K +SE ++ S + M ++
Sbjct: 111 VFCFISSEGVIMNGENINNATEDTPYPPIEQLGWYNKSKAISEQFLLATQSSMSRMKTIV 170
Query: 224 LRYFNVIGS 232
+R V GS
Sbjct: 171 IRLPLVWGS 179
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSY--RVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYAD 109
VLVTG ++G + RL ++ RV VD A+ +++ + G+ +F+ AD
Sbjct: 26 VLVTGACRFLGGYLTARLAQNPLINRVIAVD--------AIAPSKDMLRRMGRAEFVRAD 77
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
+ + + K+ D V+H AA +Y S N+ + A V+
Sbjct: 78 IRNP-FIAKVIRNGEVDTVVHAAAASYAPRSGGSAALKELNVMGAMQLFAACQKAPSVRR 136
Query: 170 LIYSSTCATYGEPDKMPI--TE-STPQKPINP-YGKAKKMSEDIIIDFSKTT-NMAVMIL 224
++ ST YG P+ TE S+ ++P + + K E + + ++AV IL
Sbjct: 137 VVLKSTSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEGYVRALGRRRPDIAVTIL 196
Query: 225 RYFNVIG 231
R N+IG
Sbjct: 197 RLANMIG 203
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 71/279 (25%), Positives = 109/279 (39%)
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVG---ESTLEPLRY-YHNITSNTLVILEAMAA 164
DL D AV FA D V F A A VG + P + Y N+ VI +
Sbjct: 41 DLRDQAAVAAFFAAEQPDYV--FLAAAKVGGIVANNTYPAEFIYDNLMIEANVIHSSYRT 98
Query: 165 HKVKTLIYSSTCATYGEPDKMPITES-TPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMI 223
K L STC Y + PI E P+ P +A +++ I ++ N
Sbjct: 99 GVSKLLFLGSTCI-YPKMASQPIREEYLLTGPLEPTNEAYAIAKIAGISLCRSYNRQYGT 157
Query: 224 LRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTC-- 281
R+ I + P G + +L E + A KI G T GT
Sbjct: 158 -RF---IAAMPTNLYGPNDNFDL-EKSHVLPALIRKFHEA----KIAGAPTVTVWGTGAP 208
Query: 282 VRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLS 341
+R++I V D+ DA L L G I N+G+G+ S+++ K G ++ + +
Sbjct: 209 LREFIHVDDVADA-ALYLMRHHEGN-DIVNIGSGEEISIRDLALLVKIVVGFEGELVFDA 266
Query: 342 RRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+P SD S++ L W R L+ ++ + W
Sbjct: 267 SKPDGTPRKLSDVSRLHS-LGWRHRI-GLEDGVRETYEW 303
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 69/282 (24%), Positives = 108/282 (38%)
Query: 109 DLGDAKAVNKIFA-ENAFDAVMHFAAVAYVGESTLEPLRYYH-NITSNTLVILEAMAAHK 166
DL V FA E ++ A V + + P + N+ T VI A H
Sbjct: 56 DLTSQSDVESFFATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYT-HG 114
Query: 167 VKTLIYSSTCATYGEPDKMPITEST----PQKPINPYGKAKKMSEDIIIDFSKTTNMAVM 222
VK L++ + Y + PI ES P +P N + K++ I + A
Sbjct: 115 VKKLLFLGSSCIYPKFAPQPIPESALLTGPLEPTNEWYAIAKIAG---IKMCQ----AYR 167
Query: 223 ILRYFNVIGSDPEGRLGEAP--HPELREHGRISGACFDAARGIIPGLKIRGTDYNTA--D 278
+ ++ I P G+ HPE H A K D
Sbjct: 168 LQHQWDAISGMPTNLYGQNDNFHPE-NSH------VLPALMRRFHEAKANNADEVVVWGS 220
Query: 279 GTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVE 338
G+ +R+++ V DL DA V L + G + NVG+G ++KE E K+ G K+
Sbjct: 221 GSPLREFLHVDDLADACVF-LMDQYSGFEHV-NVGSGVEVTIKELAELVKEVVGFKGKLV 278
Query: 339 YLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRW 380
+ + +P D SK+ L WT + + L+ L + W
Sbjct: 279 WDTTKPDGTPRKLMDSSKLAS-LGWTPKIS-LKDGLSQTYEW 318
>UNIPROTKB|Q9KV94 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237
GO:GO:0003978 GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS
PIR:D82345 RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94
DNASU:2614880 GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTG +G++G LR+L + N+G V Q QP + + D+
Sbjct: 11 ILVTGASGFVG----LRVLTQAQ-----------NIGYALVAQSRSQQPYSFEQVLLDIT 55
Query: 112 DAKAVNKIFAENAFDAVMHFAA-VAYVGESTLEPLRYYHNI-TSNTLVILEAMAAHKVKT 169
+ D V+H AA V + E+ + L+ Y ++ T TL + + + VK
Sbjct: 56 PNTDWERALV--GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQAVSAGVKR 113
Query: 170 LIYSSTCATYGEPDKM--PITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
I+ S+ GE K P +PYG +K +E +++ + T + V+I+R
Sbjct: 114 FIFLSSIKVNGEQTKAGSAFQHDDQHIPSDPYGLSKYEAEQQLLELAAETGLEVVIIR 171
>TIGR_CMR|VC_0262 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS PIR:D82345
RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94 DNASU:2614880
GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTG +G++G LR+L + N+G V Q QP + + D+
Sbjct: 11 ILVTGASGFVG----LRVLTQAQ-----------NIGYALVAQSRSQQPYSFEQVLLDIT 55
Query: 112 DAKAVNKIFAENAFDAVMHFAA-VAYVGESTLEPLRYYHNI-TSNTLVILEAMAAHKVKT 169
+ D V+H AA V + E+ + L+ Y ++ T TL + + + VK
Sbjct: 56 PNTDWERALV--GVDCVVHCAARVHQMQETEADALKAYRDVNTQGTLNLAKQAVSAGVKR 113
Query: 170 LIYSSTCATYGEPDKM--PITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
I+ S+ GE K P +PYG +K +E +++ + T + V+I+R
Sbjct: 114 FIFLSSIKVNGEQTKAGSAFQHDDQHIPSDPYGLSKYEAEQQLLELAAETGLEVVIIR 171
>RGD|1310214 [details] [associations]
symbol:Tdh "L-threonine dehydrogenase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006567
"threonine catabolic process" evidence=IEA;ISO] [GO:0008743
"L-threonine 3-dehydrogenase activity" evidence=IEA;ISO]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 RGD:1310214 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0006567
CTD:157739 GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF
OrthoDB:EOG4B2SXX GO:GO:0008743 EMBL:CH474023 IPI:IPI00870347
RefSeq:NP_001099514.1 UniGene:Rn.18003 Ensembl:ENSRNOT00000015353
GeneID:290315 KEGG:rno:290315 UCSC:RGD:1310214 NextBio:630907
Uniprot:D3ZN15
Length = 373
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 57/201 (28%), Positives = 94/201 (46%)
Query: 37 NSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQEL 96
+ST +F EP VL+TGG G +G A LL+ + DN+ ++ K +
Sbjct: 46 HST-SFSEAEP--PRVLITGGLGQLGVGLA-NLLRKRFGK---DNVILSDIR--KPPAHV 96
Query: 97 FPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAV-AYVGESTLEPLRYYHNITSNT 155
F G FIYA++ D K + +I + + H++A+ + VGE+ + PL NIT
Sbjct: 97 F-HSGP--FIYANILDYKNLREIVVNHRISWLFHYSALLSAVGEANV-PLARDVNITG-L 151
Query: 156 LVILEAMAAHKVKTLIYSSTCATYGEPD-KMPITESTPQKPINPYGKAKKMSEDIIIDFS 214
IL+ A + V+ L ST +G + P + Q+P YG +K +E + +
Sbjct: 152 HNILDVAAEYNVR-LFVPSTIGAFGPTSPRNPTPDLCVQRPRTIYGVSKVHTELMGEYYY 210
Query: 215 KTTNMAVMILRYFNVIGSDPE 235
+ LRY +I +D +
Sbjct: 211 YRYGLDFRCLRYPGIISADSQ 231
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 43/164 (26%), Positives = 77/164 (46%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
LVTGG G++G H LL+ R+ L ++ L+EL P Q+ I D+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLC---ELRVFDLHLGPWLEELETGPVQVTAIQGDVTQ 69
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYV-GESTLEPLRYYHNIT-SNTLVILEAMAAHKVKTL 170
A V A V+H A + V G ++ E + H + T ++EA + + L
Sbjct: 70 AHEVAAAVA--GAHVVIHTAGLVDVFGRASPETI---HEVNVQGTQNVIEACVQNGTRFL 124
Query: 171 IYSSTCATYGEPDKMPITESTPQKPIN--PYGKAKKMSEDIIID 212
+Y+S+ G + E+TP + + PY ++K ++E ++++
Sbjct: 125 VYTSSMEVVGPTTRG--NENTPYEAAHRHPYPRSKALAERLVLE 166
>UNIPROTKB|F1NFM2 [details] [associations]
symbol:TDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006567 "threonine catabolic process"
evidence=IEA] [GO:0008743 "L-threonine 3-dehydrogenase activity"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0006567 GeneTree:ENSGT00390000014037 OMA:DYAVEIF
GO:GO:0008743 EMBL:AADN02018298 IPI:IPI00599778
Ensembl:ENSGALT00000026878 Uniprot:F1NFM2
Length = 366
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 53/186 (28%), Positives = 84/186 (45%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VL+TGG G +G A L K + ++ LS A V + P FIY D+
Sbjct: 51 VLITGGLGQLGVGLAKLLRKRFGKNNVI--LSDIRKPADHVF---YSGP----FIYLDIL 101
Query: 112 DAKAVNKIFAENAFDAVMHFAAV-AYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D K + +I N + H++A+ + VGE+ + PL NIT V L+ A H ++ L
Sbjct: 102 DYKNLREIVVNNRITWLFHYSALLSAVGEANV-PLARAVNITGLHNV-LDIAAEHNLR-L 158
Query: 171 IYSSTCATYGEPD-KMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
ST +G + P + Q+P YG +K +E + + + LRY +
Sbjct: 159 FVPSTIGAFGPTSPRDPTPDLCIQRPRTIYGVSKVHAELMGEYYHYRYGLDFRCLRYPGI 218
Query: 230 IGSDPE 235
I +D +
Sbjct: 219 ISADSQ 224
>UNIPROTKB|Q48FN6 [details] [associations]
symbol:PSPPH_3658 "UDP-glucose 4-epimerase, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0006012 "galactose metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_275800.1 ProteinModelPortal:Q48FN6
STRING:Q48FN6 GeneID:3557056 KEGG:psp:PSPPH_3658 PATRIC:19976742
OMA:LEGWCAM ProtClustDB:CLSK458037 Uniprot:Q48FN6
Length = 326
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 56/192 (29%), Positives = 85/192 (44%)
Query: 49 VTHVLVTGGAGYIGSHAALRLLKD---SYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQF 105
V V +TG G++GS RL+K S RV + S + V E Q
Sbjct: 5 VALVAITGATGFVGSAVVRRLIKHTGHSVRVAVRGAYSCSSERINVVSAESLAPDNQ--- 61
Query: 106 IYADLGDAKAVNKIFAENAFDAVMHFAAVAYV-GESTLEPLRYYH--NITSNTLVILEAM 162
++DL V V+H AA +V E+ EP + Y N+T+ TL + E
Sbjct: 62 -WSDLVTGAHV-----------VIHCAARVHVLNETADEPDQEYFRANVTA-TLNLAEQA 108
Query: 163 AAHKVKTLIYSSTCATYGE---PDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNM 219
AA V+ I+ S+ GE P P P P++ YG +K+ +E+ + + S + M
Sbjct: 109 AAAGVRRFIFLSSIKANGEFTHPGA-PFRADDPCNPLDAYGVSKQKAEEGLRELSARSGM 167
Query: 220 AVMILRYFNVIG 231
V+I+R V G
Sbjct: 168 QVVIIRPVLVYG 179
>ZFIN|ZDB-GENE-040426-2379 [details] [associations]
symbol:tdh "L-threonine dehydrogenase"
species:7955 "Danio rerio" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-040426-2379
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 CTD:157739 GeneTree:ENSGT00390000014037
HOGENOM:HOG000034276 HOVERGEN:HBG062086 KO:K15789 OMA:DYAVEIF
OrthoDB:EOG4B2SXX EMBL:BX510941 EMBL:BC063962 IPI:IPI00488483
RefSeq:NP_998410.1 UniGene:Dr.10250 STRING:Q6P3J8
Ensembl:ENSDART00000025509 Ensembl:ENSDART00000147105 GeneID:406528
KEGG:dre:406528 InParanoid:Q6P3J8 NextBio:20818098 Uniprot:Q6P3J8
Length = 375
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 50/190 (26%), Positives = 88/190 (46%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQL----QFIY 107
VL+TGG G +G A +LL+ + + N+ +L ++ P + FIY
Sbjct: 60 VLITGGLGQLGVGLA-KLLRKRF--------GKNNV----ILSDIRKPPSNVFHSGPFIY 106
Query: 108 ADLGDAKAVNKIFAENAFDAVMHFAAV-AYVGESTLEPLRYYHNITSNTLVILEAMAAHK 166
+D+ D K + +I N ++H++A+ + VGE+ + R NIT IL+ A H
Sbjct: 107 SDILDYKNLREIVVNNRITWLVHYSALLSAVGEANVALARAV-NITG-LHNILDIAAEHG 164
Query: 167 VKTLIYSSTCATYGEPD-KMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
++ L ST +G + P + Q+P YG +K +E + + + LR
Sbjct: 165 LR-LFVPSTIGAFGPTSPRNPTPDLCVQRPRTIYGVSKVHAELMGEYYHHRYGLDFRCLR 223
Query: 226 YFNVIGSDPE 235
Y +I +D +
Sbjct: 224 YPGIISADSQ 233
>TAIR|locus:2123797 [details] [associations]
symbol:SQD1 "sulfoquinovosyldiacylglycerol 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0008146 "sulfotransferase
activity" evidence=IDA] [GO:0009247 "glycolipid biosynthetic
process" evidence=IDA] [GO:0046506 "sulfolipid biosynthetic
process" evidence=IDA] [GO:0046507 "UDPsulfoquinovose synthase
activity" evidence=IDA] [GO:0016036 "cellular response to phosphate
starvation" evidence=IEP;IMP;RCA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0008270 GO:GO:0009247 GO:GO:0016036 EMBL:AL031804
EMBL:AL161582 GO:GO:0008146 EMBL:AF022082 EMBL:AF380641
EMBL:AY113071 IPI:IPI00524549 PIR:T05311 RefSeq:NP_195029.1
UniGene:At.2479 PDB:1I24 PDB:1I2B PDB:1I2C PDB:1QRR PDBsum:1I24
PDBsum:1I2B PDBsum:1I2C PDBsum:1QRR ProteinModelPortal:O48917
SMR:O48917 IntAct:O48917 STRING:O48917 PaxDb:O48917 PRIDE:O48917
ProMEX:O48917 EnsemblPlants:AT4G33030.1 GeneID:829440
KEGG:ath:AT4G33030 TAIR:At4g33030 HOGENOM:HOG000014371
InParanoid:O48917 KO:K06118 OMA:QMTETHR PhylomeDB:O48917
ProtClustDB:PLN02572 BioCyc:MetaCyc:MONOMER-1201
EvolutionaryTrace:O48917 Genevestigator:O48917 GermOnline:AT4G33030
GO:GO:0046507 Uniprot:O48917
Length = 477
Score = 95 (38.5 bits), Expect = 0.00047, Sum P(2) = 0.00046
Identities = 44/150 (29%), Positives = 63/150 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFP------------- 98
V+V GG GY G AL L K +Y V IVDNL R L+ L P
Sbjct: 87 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 146
Query: 99 QPGQ-LQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLR-YY--HNITSN 154
G+ ++ D+ D + + + F D+V+HF S ++ R Y HN
Sbjct: 147 LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 206
Query: 155 TLVILEAMAAHKVKT-LIYSSTCATYGEPD 183
TL +L A+ + L+ T YG P+
Sbjct: 207 TLNVLFAIKEFGEECHLVKLGTMGEYGTPN 236
Score = 67 (28.6 bits), Expect = 0.00047, Sum P(2) = 0.00046
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 279 GTCVRDYIDVTDLVDAHVLALAN-AKPGKVGIYNVGTGKGRSVKEFVEACKKA---TGVN 334
G R Y+D+ D V +A+AN AK G+ ++N T + SV E KA G++
Sbjct: 342 GGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQF-SVNELASLVTKAGSKLGLD 400
Query: 335 IK 336
+K
Sbjct: 401 VK 402
>UNIPROTKB|E2R0T0 [details] [associations]
symbol:LOC477365 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008743 "L-threonine 3-dehydrogenase
activity" evidence=IEA] [GO:0006567 "threonine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0006567 GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF
GO:GO:0008743 EMBL:AAEX03014321 RefSeq:XP_534558.3
ProteinModelPortal:E2R0T0 Ensembl:ENSCAFT00000012820 GeneID:477365
KEGG:cfa:477365 NextBio:20852866 Uniprot:E2R0T0
Length = 373
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
VL+TGG G +G A L K + +++ + R K +F G FIY+D+
Sbjct: 58 VLITGGLGQLGVGLANFLRKRFGKDSVILSDIR------KPPDHIF-HSGP--FIYSDIL 108
Query: 112 DAKAVNKIFAENAFDAVMHFAAV-AYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTL 170
D K + +I N + H++A+ + VGE+ + R NIT V L+ A H ++ L
Sbjct: 109 DYKNLREIVVNNRITWLFHYSALLSAVGEANVSLARAV-NITGLHNV-LDVAAEHNLR-L 165
Query: 171 IYSSTCATYGEPD-KMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNV 229
ST +G + P + Q+P YG +K +E + + + LRY +
Sbjct: 166 FVPSTIGAFGPTSPRNPTPDLCVQRPRTIYGVSKVHAELMGEYYHYQYGLDFRCLRYPGI 225
Query: 230 IGSDPEGRLGEAPHPELREHGRISGACFD 258
I +D + G + H I F+
Sbjct: 226 ISADSQPGGGTTDYAVQIFHDAIKSGKFE 254
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTI-VDNLSRGNMGAVKVLQELFPQPGQLQFIYADL 110
+LVTGGAG+IGS ++ ++ + VD L+ G ++ L + P + F D+
Sbjct: 3 ILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYA--GNLESLTSVADSP-RYTFEKVDI 59
Query: 111 GDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAH 165
D + ++F+ + DAVMH AA ++V S + T +LEA A H
Sbjct: 60 CDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEA-ARH 113
>TIGR_CMR|CPS_2156 [details] [associations]
symbol:CPS_2156 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0016853 EMBL:CP000083 GenomeReviews:CP000083_GR OMA:KAYFLSN
RefSeq:YP_268881.1 ProteinModelPortal:Q482Y6 STRING:Q482Y6
GeneID:3521240 KEGG:cps:CPS_2156 PATRIC:21467431
ProtClustDB:CLSK906403 BioCyc:CPSY167879:GI48-2226-MONOMER
Uniprot:Q482Y6
Length = 400
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00064
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 51 HVLVTGGAGYIGSHAALRLLK-DSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYAD 109
HV VTG G++G+ A RLL+ + +VT +RG+ EL Q G + + D
Sbjct: 46 HVFVTGAGGFLGT-AICRLLRLANIKVT---GFARGHY------PEL-SQMG-VNMVQGD 93
Query: 110 LGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKT 169
+ D + + ++ D V H AA A V S + Y+ I++A +
Sbjct: 94 ITDFALLKETM--HSCDLVFHVAAKAGVWGSKDD---YFKPNVQGAKNIIQACQELAITR 148
Query: 170 LIYSST-CATYGEPDKMPITESTPQKP--INPYGKAKKMSEDIIIDFSK 215
L+Y+ST T+ D+ I ES P +N YG++K ++E ++++ S+
Sbjct: 149 LVYTSTPSVTFAGVDEAGIDESQPYADNFLNFYGESKALAEQLVLNASQ 197
>UNIPROTKB|Q8MIR0 [details] [associations]
symbol:TDH "L-threonine 3-dehydrogenase, mitochondrial"
species:9823 "Sus scrofa" [GO:0019518 "L-threonine catabolic
process to glycine" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008743 "L-threonine 3-dehydrogenase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00046 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019518
CTD:157739 GeneTree:ENSGT00390000014037 HOVERGEN:HBG062086
KO:K15789 OMA:DYAVEIF GO:GO:0008743 BRENDA:1.1.1.103 EMBL:AY095535
RefSeq:NP_999169.1 UniGene:Ssc.51 ProteinModelPortal:Q8MIR0
Ensembl:ENSSSCT00000022297 GeneID:397065 KEGG:ssc:397065
Uniprot:Q8MIR0
Length = 373
Score = 115 (45.5 bits), Expect = 0.00074, P = 0.00074
Identities = 57/205 (27%), Positives = 95/205 (46%)
Query: 35 DSN--STKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKV 92
D+N ST ++P VL+TGG G +G A LL+ + DN+ ++ K
Sbjct: 42 DANFHSTSFSEANQP---RVLITGGLGQLGVGLA-SLLRKRFGK---DNVILSDIR--KP 92
Query: 93 LQELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAV-AYVGESTLEPLRYYHNI 151
+ +F G FIY+D+ D K + +I N + H++A+ + VGE+ + R NI
Sbjct: 93 PEHVFLS-GP--FIYSDILDYKNLREIVVNNRVTWLFHYSALLSAVGEANVSLARAV-NI 148
Query: 152 TSNTLVILEAMAAHKVKTLIYSSTCATYGEPD-KMPITESTPQKPINPYGKAKKMSEDII 210
T V L+ A H ++ L ST +G + P + Q+P YG +K +E +
Sbjct: 149 TGLHNV-LDVAAEHGLR-LFVPSTIGAFGPTSPRNPTPDLCIQRPRTIYGVSKVHAELMG 206
Query: 211 IDFSKTTNMAVMILRYFNVIGSDPE 235
+ + LRY +I +D +
Sbjct: 207 EYYYYRYGLDFRCLRYPGIISADSQ 231
>DICTYBASE|DDB_G0277203 [details] [associations]
symbol:DDB_G0277203 "NAD-dependent
epimerase/dehydratase family protein" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0277203 GO:GO:0045335
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AAFI02000019 ProtClustDB:CLSZ2429982
RefSeq:XP_642727.1 ProteinModelPortal:Q86AQ3 PRIDE:Q86AQ3
EnsemblProtists:DDB0233966 GeneID:8620921 KEGG:ddi:DDB_G0277203
InParanoid:Q86AQ3 OMA:NDDANDQ Uniprot:Q86AQ3
Length = 335
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 69/259 (26%), Positives = 109/259 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
V VTG G++G++ LL+ +YRV N +K L+ P +L F DL
Sbjct: 11 VAVTGATGFLGAYIVRDLLEQNYRVLAFVR-DPYNQEKLKTLKSFDPTGSKLTFTGGDLE 69
Query: 112 DAKAVNKIFAENAFDAVMHFAA-VAYVGESTLEPLRYYHNITSN-TLVILEAMAAHKV-- 167
++ +N + V+H A+ Y S+ +P N N TL +L+A +
Sbjct: 70 TIDYEKEL--KNV-NYVIHTASPFKY---SSPDPWGEIINPAINGTLGVLKAASKISTIK 123
Query: 168 KTLIYSSTCATYGEPDKMP-ITE---STPQKPIN-PYGKAKKMSEDIIIDFSKTTNMAVM 222
K ++ SS A Y K P I + S Q PIN PY +K +E ++ K N
Sbjct: 124 KVIVTSSGLAVYDIGTKKPEINDDDWSNVQDPINQPYPYSKVAAEKKAWEYIKENNENPS 183
Query: 223 ILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCV 282
+F ++ +P LG A P + + I+ L + N A G
Sbjct: 184 T-NHFKLVVINPSYILGAALSPLVNA----------SVATIVRHLTLAEKPRNVAIGV-- 230
Query: 283 RDYIDVTDLVDAHVLALAN 301
+DV D+ +H++AL N
Sbjct: 231 ---VDVRDVSRSHLIALEN 246
>UNIPROTKB|Q71ZJ3 [details] [associations]
symbol:LMOf2365_1496 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AE017262 GenomeReviews:AE017262_GR
HOGENOM:HOG000167998 OMA:AHILAYE RefSeq:YP_014094.1
ProteinModelPortal:Q71ZJ3 STRING:Q71ZJ3 GeneID:2797765
KEGG:lmf:LMOf2365_1496 PATRIC:20324231 ProtClustDB:CLSK884558
Uniprot:Q71ZJ3
Length = 342
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 80/333 (24%), Positives = 134/333 (40%)
Query: 51 HVLVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNMGAVKVLQEL-FPQPGQLQFIYA 108
+VLVTGG G++G H +LL+ Y+V T V +L + ++V+Q QL F+
Sbjct: 4 NVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSL-KSKEKVIEVMQNNGITDFTQLSFVEL 62
Query: 109 DLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVK 168
DL + + + + V+ A+ + G+ E I T IL+A KVK
Sbjct: 63 DLSKDEGWKEAMLDCKY--VLSVASPVFFGKFKNEEELIRPAIEGITR-ILQAAKEAKVK 119
Query: 169 TLIYSSTCATYG--EPDKMPITES---TPQ--KPINPYGKAKKMSEDIIIDFSKTTNMAV 221
++ +S G DK IT T + K ++ Y K+K ++E F +
Sbjct: 120 RVVMTSNFGAIGFSNADKNSITTEAYWTDELAKGLSAYEKSKLIAEKEAWKFMENETE-- 177
Query: 222 MILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGL--KIRGTDYNTADG 279
L + + +P G P H +SG+ FD + ++ G +I N D
Sbjct: 178 --LEFATI---NPVAIFG----PSQSSH--VSGS-FDLLKNLLNGSMKRIISIPLNVVDA 225
Query: 280 TCVRD-YIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVN--IK 336
V D +I +A+ + G++ + ++ R E V K T N I+
Sbjct: 226 RDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVSKMPKKTLPNAAIR 285
Query: 337 VEYLSRRPGDYAEVYSDP------SKIRDELNW 363
+ + E+ + SK RD L W
Sbjct: 286 AAAIFSKHAKEGELMINMNRQISNSKARDLLGW 318
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 114 (45.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 46/177 (25%), Positives = 79/177 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+LVTGG G++G A RL Y VT G K + ++ Q G ++F++ L
Sbjct: 3 MLVTGGTGFLGQKLAFRLKNMGYEVTAT--------GRNKTIGKVLEQNG-IKFVHCPLE 53
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLI 171
D + V ++ + D + H A + + +Y+ T I+E + +K LI
Sbjct: 54 DRERVLQVCKDK--DYIFHSGAHSSPWGKYED---FYNANVLGTKHIIEGSQKYGIKRLI 108
Query: 172 YSSTCATYGEPD-KMPITEST--PQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
+ ST + Y D + + E+ P +N Y K M+E I D + + V+ +R
Sbjct: 109 HVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAI-DQAFAHGLPVITIR 164
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 13/59 (22%), Positives = 29/59 (49%)
Query: 286 IDVT---DLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLS 341
+D+T ++VDA +L + + K YN+ + ++ E +E K ++ + +S
Sbjct: 199 VDITYVENVVDALLLCMHSPKHTLGQKYNITNDERINLYEVIENVMKRLDKEVRYKKIS 257
>CGD|CAL0000557 [details] [associations]
symbol:orf19.5611 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043892 "methylglyoxal reductase (NADPH-dependent) activity"
evidence=IEA] [GO:0046568 "3-methylbutanol:NAD(P) oxidoreductase
activity" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IEA] [GO:0008204 "ergosterol metabolic process"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
CGD:CAL0000557 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AACQ01000034
EMBL:AACQ01000033 RefSeq:XP_719172.1 RefSeq:XP_719286.1
ProteinModelPortal:Q5ABT9 GeneID:3639057 GeneID:3639181
KEGG:cal:CaO19.13054 KEGG:cal:CaO19.5611 Uniprot:Q5ABT9
Length = 343
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 71/294 (24%), Positives = 124/294 (42%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVT-IVDNLSRGNMGAVKVLQELFPQPGQLQF-IYAD 109
V+V+G G+I H +LL +Y+V V + ++G+ L +LF P L + I D
Sbjct: 7 VIVSGATGFIAQHVVKQLLAKNYQVIGTVRSTAKGDH-----LLKLFNNPQNLSYEIVED 61
Query: 110 LGDAKAVNKIFAENAFDAV-MHFAAVAYVGESTLEPLRYYHNI--TSNTLVILEAMAAHK 166
+G A +K+ ++ V +H A+ + + +E + T N L + +
Sbjct: 62 VGTKGAFDKVLQKHGEAKVFLHLASPFHFNVTDVEKELLLPAVDGTKNVLQAIYNFGNNI 121
Query: 167 VKTLIYSSTCA---TYGEPDKMPI-TESTPQK---------PINPYGKAKKMSEDIIIDF 213
K +I SS A E DK I TE + P+N Y +KK +E DF
Sbjct: 122 EKVVITSSYAAISTASKEADKNAIITEKDWNEISWQDALLNPVNGYRGSKKFAEKAAWDF 181
Query: 214 SKTTNMAVMILRYFNVIGSDPEGRLG-EAPHPELREHGRISGACFDAARGIIPGLKIRGT 272
K+ + L N P G ++ E+++ S ++ LK++
Sbjct: 182 IKSNDNVKFSLSTIN-----PSFVFGPQSFGSEIKQSLNTSSEIINSI------LKLKPN 230
Query: 273 DYNTADGTCVRDYIDVTDLVDAHVLALAN--AKPGKVGIYNVGTGKGRSVKEFV 324
D A ++DV D+ AH++A N AK ++ + N G +S+ + +
Sbjct: 231 DSIPASKG---GWVDVRDVAKAHIIAFENEDAKNQRI-LLNSGRFTSQSLVDII 280
>TIGR_CMR|SO_3173 [details] [associations]
symbol:SO_3173 "UDP-galactose 4-epimerase, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 HOGENOM:HOG000167991
RefSeq:NP_718729.1 ProteinModelPortal:Q8ECG9 GeneID:1170867
KEGG:son:SO_3173 PATRIC:23526030 OMA:HAMSGAP Uniprot:Q8ECG9
Length = 309
Score = 113 (44.8 bits), Expect = 0.00087, P = 0.00087
Identities = 49/178 (27%), Positives = 80/178 (44%)
Query: 52 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
+L+TG G++G LR L RV G K ++ G+L A+
Sbjct: 6 ILLTGATGFVGQQI-LRQLPQDTRV----------FGRTKPARDCHFFAGELT---ANTD 51
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYV-GESTLEPLRYYHNI-TSNTLVILEAMAAHKVKT 169
A++ + D V+H AA A+V E+ + Y + T TL + E AA VK
Sbjct: 52 YRSALSGV------DVVIHCAARAHVMNETANNAAQLYQEVNTLVTLALAEQAAAAGVKR 105
Query: 170 LIYSSTCATYGEPD--KMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILR 225
I+ ST GE S ++P++ YG++K +E + D ++ T + V+I+R
Sbjct: 106 FIFISTIKVNGEATIAGQLFRASDARQPLDHYGESKAKAEIGLFDIARKTEIEVVIIR 163
>UNIPROTKB|G4MQ64 [details] [associations]
symbol:MGG_02304 "Leucoanthocyanidin reductase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CM001231 RefSeq:XP_003709069.1
ProteinModelPortal:G4MQ64 EnsemblFungi:MGG_02304T0 GeneID:2681401
KEGG:mgr:MGG_02304 Uniprot:G4MQ64
Length = 354
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 76/291 (26%), Positives = 113/291 (38%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRV-TIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLG 111
LVTGG GYIG H LL + V T V + + A+ L++ QPG+LQ +ADL
Sbjct: 10 LVTGGNGYIGLHVVTALLSKGFIVHTTVRSNKFKKVAALYALRDRH-QPGRLQIFHADLL 68
Query: 112 DAKAVNKIFAENAFDAVMHFAAVAYVGESTL--EPLRYYHNITSNTLVILEAMAAHKVKT 169
+ K A V H A+ + E E + V+ + VK
Sbjct: 69 RPGSFTK--AMKGCTVVHHIASPFLLPEDIKDGETQCIIPAVEGARNVLASVNETYSVKR 126
Query: 170 LIY-SSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTT--NMAVMILRY 226
+++ SS A YG D + E Y S +SK A MI +
Sbjct: 127 VVFMSSVGAIYG--DSRDVIEYMDGTLTEEYWNETSTSHHYPFHYSKVLAEKEAWMISKE 184
Query: 227 ---FNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVR 283
++++ P LG P L + G SG+ R I G G N
Sbjct: 185 QSRWDMVVICPGLALG----PSLSQDGSDSGSVVLMNR-IFGGQLFFGAP-NLH-----L 233
Query: 284 DYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVN 334
+DV ++ AHV A A+ P G Y + + RS+ + C++ G +
Sbjct: 234 PVVDVREVATAHVQA-ADL-PWASGRYILAATETRSLGDIARICRRQKGAS 282
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 114 (45.2 bits), Expect = 0.00093, P = 0.00093
Identities = 46/168 (27%), Positives = 80/168 (47%)
Query: 53 LVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGD 112
LVTGG G++G H LL+ R+ + + ++G L+EL P Q+ I D+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLREL-RIFDLHLGPW--LEELKTGPVQVTAIQGDVTQ 69
Query: 113 AKAVNKIFAENAFDAVMHFAAVAYV-GESTLEPLRYYHNIT-SNTLVILEAMAAHKVKTL 170
A V A V+H A + V G+++ E + H + T ++EA + L
Sbjct: 70 AHEVAAAVA--GAHVVIHTAGLVDVFGKTSPETI---HEVNVQGTQNVIEACVQTGTRFL 124
Query: 171 IYSSTCATYGEPDK-MPI---TESTPQKPIN--PYGKAKKMSEDIIID 212
IY+S+ G K P E+TP + ++ PY +K ++E ++++
Sbjct: 125 IYTSSMEVVGPNIKGQPFYRGNENTPYEAVHRHPYPCSKALAEQLVLE 172
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 393 393 0.00095 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 212
No. of states in DFA: 606 (64 KB)
Total size of DFA: 241 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.94u 0.11s 31.05t Elapsed: 00:00:02
Total cpu time: 30.98u 0.11s 31.09t Elapsed: 00:00:02
Start: Fri May 10 17:07:18 2013 End: Fri May 10 17:07:20 2013
WARNINGS ISSUED: 1