BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016210
(393 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549190|ref|XP_002515649.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223545192|gb|EEF46701.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 523
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/398 (67%), Positives = 315/398 (79%), Gaps = 9/398 (2%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
MD + + PL IHLVT+T SPEFTHL +L++SS++GLDAEWKP R HQS FP V+LLQLA
Sbjct: 1 MDPSDQNPLTIHLVTTTNSPEFTHLTESLTRSSIIGLDAEWKPVRGHQSTFPTVALLQLA 60
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
CQ P+F +S ES +VFLLDLS I L SIW+LLKE+F SPDILKLGF+FKQDL+YLS
Sbjct: 61 CQLRPQFGSDSAES---LVFLLDLSLIRLSSIWKLLKEVFASPDILKLGFRFKQDLVYLS 117
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
STFCSQGCD GF +VEPYLDITSIY+ L HKQ GRK+PKETKSLA IC E+L ISLSKEL
Sbjct: 118 STFCSQGCDPGFHKVEPYLDITSIYHFLQHKQRGRKIPKETKSLATICNEVLGISLSKEL 177
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSN-LDLGLK 239
QCSDWS+RPLTEEQK YAAIDAHCL+EIFN+F+ V+++G +++ EL SSN + GLK
Sbjct: 178 QCSDWSHRPLTEEQKAYAAIDAHCLLEIFNVFRANVSKEGEFYNNVMELQSSNIISHGLK 237
Query: 240 GILEKPDIGNKTVRFKLCEALDIIRAT--SYYSQCLPEG--VVSRVSYLNTMPMDESLVK 295
ILE+ D G+ +R + EAL+II+AT S S + G VVS S +NT+PMDE L+
Sbjct: 238 EILERFDAGDALIRTRFSEALNIIQATVASEDSHRIARGERVVSITSSINTLPMDELLLN 297
Query: 296 IVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDG 355
IVR++GEKI+L E D+ PK +KKG+KRSS IV REK L +I DWQGPPPWD SLGGDG
Sbjct: 298 IVRRFGEKIVLGESDRKPKAFRKKGKKRSS-IVTCREKLLGNICDWQGPPPWDFSLGGDG 356
Query: 356 YPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRSNI 393
PKFLCDVMVEGLAKHLRCVGIDAA P SKKPE R I
Sbjct: 357 CPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPESRELI 394
>gi|359490814|ref|XP_002271858.2| PREDICTED: probable exonuclease mut-7 homolog [Vitis vinifera]
Length = 513
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/387 (67%), Positives = 312/387 (80%), Gaps = 9/387 (2%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+IHLV S +SPEFT L ++L+QSSL+GLDAEWKP R+ QS+FP VSLLQLACQ GPR P
Sbjct: 4 EIHLVASIDSPEFTLLTQSLTQSSLIGLDAEWKPIRTQQSSFPTVSLLQLACQLGPRLGP 63
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+S +S +VFLLDLS+I L SI+ELL+++FVSPD+LKLGF+FKQDLIYLSSTFCSQGCD
Sbjct: 64 DSAKS---LVFLLDLSAISLSSIYELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCD 120
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
GFDRVEP+LDITSIYN+L HK LGR++PKETKSLA+ICKELL ISLSKELQCSDWS+RP
Sbjct: 121 PGFDRVEPFLDITSIYNYLQHKSLGRRIPKETKSLASICKELLGISLSKELQCSDWSHRP 180
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGN 249
LTEEQK YAA DAHCL+EIFNIF KVA+KGNS S +E SN+D GLK ILE PDI +
Sbjct: 181 LTEEQKTYAATDAHCLLEIFNIFHFKVAEKGNSFCSATEQRFSNVDCGLKQILENPDICH 240
Query: 250 KTVRFKLCEALDIIRATSY---YSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILL 306
K +R K +A+DI+RAT+ + E VVS S NT+PMD+SL IVRKYGE+ILL
Sbjct: 241 KLLRSKFFDAVDIVRATTSEFPQRKATLEEVVSWSSCRNTIPMDDSLFSIVRKYGERILL 300
Query: 307 RECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVE 366
+E D+ PKT KK ++ S+V +EK+++ +W PPPWDL+LGGDG PKFLCDVMVE
Sbjct: 301 KESDRKPKTKKKGKKQSSAV---CKEKQIEIFDEWCSPPPWDLTLGGDGCPKFLCDVMVE 357
Query: 367 GLAKHLRCVGIDAATPRSKKPEPRSNI 393
GLAKHLRCVGIDAA P SKKPE R I
Sbjct: 358 GLAKHLRCVGIDAAIPYSKKPESRELI 384
>gi|302143936|emb|CBI23041.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/400 (65%), Positives = 312/400 (78%), Gaps = 22/400 (5%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+IHLV S +SPEFT L ++L+QSSL+GLDAEWKP R+ QS+FP VSLLQLACQ GPR P
Sbjct: 4 EIHLVASIDSPEFTLLTQSLTQSSLIGLDAEWKPIRTQQSSFPTVSLLQLACQLGPRLGP 63
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+S +S +VFLLDLS+I L SI+ELL+++FVSPD+LKLGF+FKQDLIYLSSTFCSQGCD
Sbjct: 64 DSAKS---LVFLLDLSAISLSSIYELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCD 120
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
GFDRVEP+LDITSIYN+L HK LGR++PKETKSLA+ICKELL ISLSKELQCSDWS+RP
Sbjct: 121 PGFDRVEPFLDITSIYNYLQHKSLGRRIPKETKSLASICKELLGISLSKELQCSDWSHRP 180
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQ-------------KGNSCSSISELDSSNLDL 236
LTEEQK YAA DAHCL+EIFNIF KVA+ KGNS S +E SN+D
Sbjct: 181 LTEEQKTYAATDAHCLLEIFNIFHFKVAEKGYVGSCNLRRSSKGNSFCSATEQRFSNVDC 240
Query: 237 GLKGILEKPDIGNKTVRFKLCEALDIIRATSY---YSQCLPEGVVSRVSYLNTMPMDESL 293
GLK ILE PDI +K +R K +A+DI+RAT+ + E VVS S NT+PMD+SL
Sbjct: 241 GLKQILENPDICHKLLRSKFFDAVDIVRATTSEFPQRKATLEEVVSWSSCRNTIPMDDSL 300
Query: 294 VKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGG 353
IVRKYGE+ILL+E D+ PKT KK ++ S+V +EK+++ +W PPPWDL+LGG
Sbjct: 301 FSIVRKYGERILLKESDRKPKTKKKGKKQSSAV---CKEKQIEIFDEWCSPPPWDLTLGG 357
Query: 354 DGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRSNI 393
DG PKFLCDVMVEGLAKHLRCVGIDAA P SKKPE R I
Sbjct: 358 DGCPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPESRELI 397
>gi|297808445|ref|XP_002872106.1| hypothetical protein ARALYDRAFT_489298 [Arabidopsis lyrata subsp.
lyrata]
gi|297317943|gb|EFH48365.1| hypothetical protein ARALYDRAFT_489298 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/382 (61%), Positives = 288/382 (75%), Gaps = 10/382 (2%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKI+LV+ST+S EFTHL + ++S+++ LDAEWKPQ S+ S+FP V+LLQ+AC R +
Sbjct: 5 LKIYLVSSTDSSEFTHLKWSFTRSTIIALDAEWKPQHSNTSSFPTVTLLQVAC----RLS 60
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+D+ S VFL+DL+SI LPS+WELL E+FVSPD+LKLGF+FKQDL+YLSSTF GC
Sbjct: 61 YATDDDEVSDVFLIDLTSIHLPSVWELLNEMFVSPDVLKLGFRFKQDLVYLSSTFTQHGC 120
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ GF V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS R
Sbjct: 121 EGGFQEVKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYR 180
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PLTEEQK YAA DAHCL++IF++F+ + + I+ DS ++GL+ IL + D
Sbjct: 181 PLTEEQKLYAATDAHCLLQIFDVFKAHLVE------GITVQDSREKNVGLQEILTESDYS 234
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
+K V KLC+A D+IR+ S Q + VVSR + LNTMPMDE+L+KIVRKYGE+ILL+E
Sbjct: 235 SKIVTAKLCKATDVIRSMSENGQNIANRVVSRKTTLNTMPMDENLLKIVRKYGERILLKE 294
Query: 309 CDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D P KKK RKR S + K L DWQGPPPWDLSLGGDG PKFL DVMVEGL
Sbjct: 295 SDLLPNKLKKKTRKRVSSSSMNTNKHLVCSADWQGPPPWDLSLGGDGCPKFLLDVMVEGL 354
Query: 369 AKHLRCVGIDAATPRSKKPEPR 390
AKHLRCVGIDAA P SKKP+ R
Sbjct: 355 AKHLRCVGIDAAIPHSKKPDSR 376
>gi|224135103|ref|XP_002321984.1| predicted protein [Populus trichocarpa]
gi|222868980|gb|EEF06111.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/392 (64%), Positives = 291/392 (74%), Gaps = 44/392 (11%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQR--SHQSNFPRVSLLQ 58
MD KPLKIHLV STESPEFTHL ++L++SS++GLDAEWKP R +HQ FP VSLLQ
Sbjct: 1 MDLPSEKPLKIHLVNSTESPEFTHLTQSLTRSSIIGLDAEWKPIRGQTHQPTFPTVSLLQ 60
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIY 118
LACQ G +SDES FLLDL S+PLPSIWELL+E FVSPDILKLGFKFKQDL+Y
Sbjct: 61 LACQLGH----DSDESET---FLLDLHSVPLPSIWELLRETFVSPDILKLGFKFKQDLVY 113
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK 178
LSSTFC QGCD GFD+VEPYLDITSIY + HKQ GRK PKETKSLA ICKE+L ISLSK
Sbjct: 114 LSSTFCLQGCDPGFDKVEPYLDITSIYYQMQHKQQGRKGPKETKSLATICKEVLGISLSK 173
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGL 238
ELQCSDWS+RPLTEEQK YAA DAHCL++IFN+FQ + +KG+ L
Sbjct: 174 ELQCSDWSHRPLTEEQKTYAAADAHCLLKIFNVFQDNIVKKGS--------------WWL 219
Query: 239 KGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVR 298
K TV + C+ + + + VSR S NTMPM+ESL+KIVR
Sbjct: 220 KA----------TVSSENCQRIAEV-----------DVAVSRTSSRNTMPMNESLLKIVR 258
Query: 299 KYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPK 358
KYGEKILLRE D+ PK ++KK +K S++ +REK+LD+ GDWQGPPPWDLSLGGDG PK
Sbjct: 259 KYGEKILLRESDRKPKAARKKAKKHPSLVAVTREKQLDNTGDWQGPPPWDLSLGGDGCPK 318
Query: 359 FLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
FLCDVM+EGLAKHLRCVG+DAA P SKKPE R
Sbjct: 319 FLCDVMIEGLAKHLRCVGVDAAIPSSKKPESR 350
>gi|357436407|ref|XP_003588479.1| hypothetical protein MTR_1g007660 [Medicago truncatula]
gi|355477527|gb|AES58730.1| hypothetical protein MTR_1g007660 [Medicago truncatula]
Length = 512
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/397 (60%), Positives = 294/397 (74%), Gaps = 14/397 (3%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
MD +KPL+IH VT+T+SPEFTHL R+L+Q+SLVGLDAEWKP R+HQ++FP VSLLQ+A
Sbjct: 1 MDPPNQKPLEIHFVTTTDSPEFTHLTRSLTQTSLVGLDAEWKPVRTHQNSFPTVSLLQIA 60
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
CQ G DE VVFLLDL S+PL SIWE L+E+ VS DILKLGF+FKQDL+YLS
Sbjct: 61 CQLG------DDE----VVFLLDLISLPLSSIWEPLREMLVSADILKLGFRFKQDLVYLS 110
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
STFC QGC+ GFD+VEPYLDITS+YNHL K+ GR K+ KSL+ IC ELL I+LSKEL
Sbjct: 111 STFCEQGCNPGFDKVEPYLDITSVYNHLQFKKNGRIASKQNKSLSTICGELLGITLSKEL 170
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKG 240
QCSDWS RPLTEEQ YAA+DAHCL+ IF +FQ VA++G + + L + +LGLK
Sbjct: 171 QCSDWSQRPLTEEQMTYAAMDAHCLLGIFKVFQATVAKEGELVNKTNILSIRSANLGLKE 230
Query: 241 ILEKPDIGNKTVRFKLCEALDIIRATSYYSQCL----PEGVVSRVSYLNTMPMDESLVKI 296
+ K D +K + CEAL I++ATS V+ + S +T PMDE L+KI
Sbjct: 231 LFRKHDTSDKVHSTQFCEALAIVQATSCSDVVRVISSAGAVIQKSSCRDTKPMDEFLLKI 290
Query: 297 VRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGY 356
VRK+G++ILL+E D+APKTSKKK +K+ + +EK L++ +WQG PWD +GGDG+
Sbjct: 291 VRKHGDRILLKESDRAPKTSKKKRKKQLPINGIPKEKHLENFDEWQGTAPWDPLVGGDGF 350
Query: 357 PKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRSNI 393
PKFLCDVMVEGLAKHLRCVGIDAA P SKKPEPR I
Sbjct: 351 PKFLCDVMVEGLAKHLRCVGIDAAVPSSKKPEPRELI 387
>gi|15237941|ref|NP_197822.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
gi|10177895|dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana]
gi|30102678|gb|AAP21257.1| At5g24340 [Arabidopsis thaliana]
gi|110743600|dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana]
gi|332005912|gb|AED93295.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
Length = 505
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/382 (60%), Positives = 288/382 (75%), Gaps = 13/382 (3%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKI+LV+ST+S EFTHL + ++S+++ LDAEWKPQ S+ S+FP V+LLQ+AC+
Sbjct: 5 LKIYLVSSTDSSEFTHLKWSFTRSTIIALDAEWKPQHSNTSSFPTVTLLQVACRL----- 59
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
S ++ S VFL+DLSSI LPS+WELL ++FVSPD+LKLGF+FKQDL+YLSSTF GC
Sbjct: 60 --SHATDVSDVFLIDLSSIHLPSVWELLNDMFVSPDVLKLGFRFKQDLVYLSSTFTQHGC 117
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ GF V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS R
Sbjct: 118 EGGFQEVKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYR 177
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PLTEEQK YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D
Sbjct: 178 PLTEEQKLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYS 231
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
+K V KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+ILL+E
Sbjct: 232 SKIVTVKLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGERILLKE 291
Query: 309 CDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D PK KKK R+R + + K+L DWQGPPPWD SLGGDG PKFL DVMVEGL
Sbjct: 292 SDLLPKKLKKKTRRRVASSTMNTNKQLVCSADWQGPPPWDSSLGGDGCPKFLLDVMVEGL 351
Query: 369 AKHLRCVGIDAATPRSKKPEPR 390
AKHLRCVGIDAA P SKKP+ R
Sbjct: 352 AKHLRCVGIDAAIPHSKKPDSR 373
>gi|449456993|ref|XP_004146233.1| PREDICTED: probable exonuclease mut-7 homolog [Cucumis sativus]
gi|449522385|ref|XP_004168207.1| PREDICTED: probable exonuclease mut-7 homolog [Cucumis sativus]
Length = 524
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/401 (57%), Positives = 290/401 (72%), Gaps = 14/401 (3%)
Query: 1 MDCTYRKP-LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRS--HQSNFPRVSLL 57
MD +P +IHLV+S +SPEFT L L++S L+ LDAEWKP ++ S+FPRVSLL
Sbjct: 1 MDSHIARPAFEIHLVSSIDSPEFTLLTHTLTRSHLIALDAEWKPLQTPDQHSSFPRVSLL 60
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLI 117
Q+ACQ SD N SV FLLDL S+PL SIW LL+++FVSP +LKLGF+FKQDL+
Sbjct: 61 QIACQF------HSDHRNDSVAFLLDLLSVPLSSIWHLLRDVFVSPYVLKLGFRFKQDLV 114
Query: 118 YLSSTFCSQGCDIG--FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDIS 175
YLS+TF S G DR+EP++DI SIY HL HKQ GRKL K++KSL IC E+L S
Sbjct: 115 YLSTTFSSYGGGGVSGLDRIEPFMDIASIYYHLQHKQKGRKLHKQSKSLTAICSEVLGFS 174
Query: 176 LSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLD 235
LSKELQCSDWS RPLTEEQ YAA+DAHCL+EIFN+F KV ++G+ ++S + S+ ++
Sbjct: 175 LSKELQCSDWSVRPLTEEQIAYAAMDAHCLLEIFNVFYSKVLKEGDVLRNVSAVPSTEMN 234
Query: 236 LGLKGILEKPDIGNKTVRFKLCEALDIIRAT-SYYSQCLP--EGVVSRVSYLNTMPMDES 292
GL+ ILEK D+ K +R K+ EA +IIRAT S + Q + G+ S S +N MPMDE
Sbjct: 235 TGLRVILEKQDMHEKILRTKVSEASNIIRATASGFPQSMANIRGICSASSSINCMPMDED 294
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLG 352
L K+V+ YGE+I+L+E DK PKTSK+K ++ S++ V EK++ DW GPPPWDLSLG
Sbjct: 295 LQKVVKSYGERIILKESDKKPKTSKRKSKRSSTMKVGCIEKQIVSDEDWHGPPPWDLSLG 354
Query: 353 GDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRSNI 393
GDG PKFLCDVMVEGLAKHLRCVG+DAA P SK P R I
Sbjct: 355 GDGCPKFLCDVMVEGLAKHLRCVGVDAAVPFSKNPYSRELI 395
>gi|356550873|ref|XP_003543807.1| PREDICTED: probable exonuclease mut-7 homolog [Glycine max]
Length = 506
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/391 (55%), Positives = 279/391 (71%), Gaps = 25/391 (6%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
K LK+HLVT T+S EF L+ AL+++S+VGLDAEWKP R FPRV++LQ+AC
Sbjct: 8 KLLKVHLVTCTDSAEFALLSSALTRTSVVGLDAEWKPVRRL---FPRVAVLQIAC----- 59
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ 126
S VFLLDL S+PL S+W L+EL +SPDILKLGF FKQDL+YLSSTF S
Sbjct: 60 --------GDSAVFLLDLLSLPLSSLWAPLRELLLSPDILKLGFGFKQDLVYLSSTFASH 111
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
G GFD+VEPYLDI S+YNHL H + + +PK++KSL+ IC E+L SLSKELQCSDWS
Sbjct: 112 G---GFDKVEPYLDIKSVYNHLQHNK--KHVPKQSKSLSTICAEVLGFSLSKELQCSDWS 166
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPD 246
+RPLTEEQ YAA+DAHCL++IF +FQ KV ++G+ + L + + LGLK + + D
Sbjct: 167 HRPLTEEQITYAAMDAHCLLDIFEVFQAKVVKEGDLILETTVLSNPDASLGLKELFQNHD 226
Query: 247 IGNKTVRFKLCEALDIIRAT--SYYSQCLP--EGVVSRVSYLNTMPMDESLVKIVRKYGE 302
+ +K +R EAL I++AT S +Q +P G++ + S T+PMDE L+K+V+KY +
Sbjct: 227 MSDKVLRAHFSEALAIVQATTCSDTAQMIPLAGGMIQKSSCWVTVPMDEVLLKVVKKYSD 286
Query: 303 KILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCD 362
KILL+E D+ PK+SKKKG+K S S EK + +W+G PPWD +GG+ YPKFLCD
Sbjct: 287 KILLKESDRKPKSSKKKGKKHSLFNGISLEKHFEKSDEWRGTPPWDPLVGGNAYPKFLCD 346
Query: 363 VMVEGLAKHLRCVGIDAATPRSKKPEPRSNI 393
VMVEGLAKHLRCVGIDAA P SKKPEPR I
Sbjct: 347 VMVEGLAKHLRCVGIDAAIPYSKKPEPRMLI 377
>gi|356554607|ref|XP_003545636.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Glycine max]
Length = 499
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/388 (55%), Positives = 273/388 (70%), Gaps = 29/388 (7%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LK+HLVT T+SPEF L+ ALS++S+VGLDAEWKP R +FPRV++LQ+AC
Sbjct: 9 LKVHLVTRTDSPEFALLSSALSRTSVVGLDAEWKPVRR---SFPRVAVLQIAC------- 58
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
S VF+LDL S+PL S+W+ L+EL +SPDILKLGF FKQDL+YLSSTF S G
Sbjct: 59 ------GDSAVFVLDLLSLPLSSLWDPLRELLLSPDILKLGFGFKQDLVYLSSTFASHG- 111
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
GFD+VEPYLDI S+YNHL H + + +PK++KSL+ IC E+L SLSKELQCSDWS R
Sbjct: 112 --GFDKVEPYLDIKSVYNHLQHNK--KHVPKQSKSLSTICTEVLGFSLSKELQCSDWSYR 167
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PLTEEQ YAA+DAHCL++IF +FQ K +K + I + + LGLK + D
Sbjct: 168 PLTEEQITYAAMDAHCLLDIFEVFQTKFVKK----AFIKDFKRV-VCLGLKELFRNHDTS 222
Query: 249 NKTVRFKLCEALDIIRATS---YYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKIL 305
+K +R + CEAL I++AT+ G + S T+PMDE L+K+V+KYG++IL
Sbjct: 223 DKVLRAQFCEALAIVQATTCSDAAQMIFSRGNDPKSSCWVTVPMDEVLLKVVKKYGDRIL 282
Query: 306 LRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMV 365
L+E D+ PK+SKKKG+K S S+EK + WQG PPWD +GG+GYPKFLCDVMV
Sbjct: 283 LKESDRKPKSSKKKGKKHSLFNGISQEKHFEKSDGWQGTPPWDPLVGGNGYPKFLCDVMV 342
Query: 366 EGLAKHLRCVGIDAATPRSKKPEPRSNI 393
EGLAKHLRCVGIDAA P SKKPEPR I
Sbjct: 343 EGLAKHLRCVGIDAAVPYSKKPEPRMLI 370
>gi|414589140|tpg|DAA39711.1| TPA: hypothetical protein ZEAMMB73_184842 [Zea mays]
Length = 618
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/419 (46%), Positives = 247/419 (58%), Gaps = 76/419 (18%)
Query: 1 MDCTYRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQS---------- 49
MD P +HLVT S L R+L+ + +V LDAEWKP+R
Sbjct: 115 MDHAPAPPFAVHLVTGGGSSSGIALLLRSLAAARVVALDAEWKPRRRGSPAAADPAALGD 174
Query: 50 -------------NFPRVSLLQLACQPGPRF-NPESDESNASVVFLLDLSSIPLPSIWEL 95
FP V+LLQ+AC RF + E S VF++DL S+PL +W
Sbjct: 175 DTTPASETSPAPPKFPTVTLLQVAC----RFSDGGGGEGERSEVFVVDLLSVPLADLWAP 230
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLG 154
L+ELF P+ LKLGF+FKQDL+YLSSTF + GCD GFDRVEP+LD+T+IY +L
Sbjct: 231 LRELFERPETLKLGFRFKQDLVYLSSTFSAALGCDSGFDRVEPFLDVTNIYYYLKGHDRQ 290
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
+KLPKETKSLA IC+ELL I LSKELQCSDWS RPL+E Q YAA DA+ L++IF++FQ
Sbjct: 291 KKLPKETKSLATICEELLGILLSKELQCSDWSCRPLSEGQIQYAASDAYYLLDIFDLFQK 350
Query: 215 KVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLP 274
++ +G CSS +EL S + C ++ I ++S Y C
Sbjct: 351 RITMEGK-CSSTTELTSD----------------------RHCSSVVIECSSSGYGIC-- 385
Query: 275 EGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKR 334
L+ IV KY EKI+L E D P+TS++K + + + + KR
Sbjct: 386 --------------SGSCLMSIVTKYSEKIILTESDAKPRTSRRKEKLK----IPANAKR 427
Query: 335 LDDI---GDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
D++ +WQGPPPWD S+GGDGYPKFLCDVM+EGLAKHLRCVGIDAA P SKKPEPR
Sbjct: 428 KDNVDCSSEWQGPPPWDPSIGGDGYPKFLCDVMIEGLAKHLRCVGIDAAIPSSKKPEPR 486
>gi|326513036|dbj|BAK03425.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 178/399 (44%), Positives = 240/399 (60%), Gaps = 68/399 (17%)
Query: 9 LKIHLVTS-TESPEFTHLARALSQSSLVGLDAEWKPQ--------------RSHQSNFPR 53
L +HLV SPE +HL ++LS + +V DAEWKP+ + + P
Sbjct: 11 LAVHLVAGDVSSPELSHLIQSLSTARIVAFDAEWKPRCRAPSAPSDDASPAPRNPAQLPT 70
Query: 54 VSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFK 113
V++LQLAC+ E + VF++DL ++PL +W L+ELF PD+LKLGF+FK
Sbjct: 71 VTVLQLACR---------GEDGGNEVFVVDLLAVPLADLWAPLRELFERPDVLKLGFRFK 121
Query: 114 QDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELL 172
QDL+YLS+TF + GCD GF+RVEP+LD+T++Y +L +LPKETKSLA+IC+ELL
Sbjct: 122 QDLVYLSATFTAALGCDSGFNRVEPFLDVTNVYYYLKGHDTQTRLPKETKSLASICEELL 181
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS 232
++SLSKELQCSDWS RPL+E Q YAA DA+ L+ IF++F KV+ + CSS +E
Sbjct: 182 NVSLSKELQCSDWSCRPLSEGQIQYAASDAYYLLYIFDLFHQKVSIE-EKCSSTAEASDE 240
Query: 233 NLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDES 292
+ + S+C G N + D
Sbjct: 241 HF-------------------------------SQRASECSSSG--------NDICFDGY 261
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIG-DWQGPPPWDLSL 351
L I+ KY ++ILL E D +S++K +++ S D+R K D G +W GPPPWD S+
Sbjct: 262 LTSIITKYSDRILLTESDMKAHSSRRKEKQKLS--SDARCKEKFDYGTEWTGPPPWDPSV 319
Query: 352 GGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
GGDGYPKFLCDVM+EGLAKHLRCVG+DAATP KKP+PR
Sbjct: 320 GGDGYPKFLCDVMIEGLAKHLRCVGLDAATPSCKKPQPR 358
>gi|242048348|ref|XP_002461920.1| hypothetical protein SORBIDRAFT_02g010640 [Sorghum bicolor]
gi|241925297|gb|EER98441.1| hypothetical protein SORBIDRAFT_02g010640 [Sorghum bicolor]
Length = 505
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 179/382 (46%), Positives = 227/382 (59%), Gaps = 70/382 (18%)
Query: 34 LVGLDAEWKPQRSHQS------------------------NFPRVSLLQLACQPGPRFNP 69
+V LDAEWKP+R FP V+LLQ+AC+ G
Sbjct: 37 VVALDAEWKPRRRGSPAAAAPAALGDGSTSLALEASPAPPKFPTVTLLQVACRFG----- 91
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GC 128
+ E S VF++DL S+PL +W L+ELF PD LKLGF+FKQDL+YLS+TF + GC
Sbjct: 92 DGSEGERSEVFVVDLLSVPLADLWAPLRELFERPDALKLGFRFKQDLVYLSATFSAALGC 151
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
D GFDRVEP+LD+T+IY +L +KLPKETKSLA IC+ELL + LSKELQCSDWS R
Sbjct: 152 DSGFDRVEPFLDVTNIYYYLKGHDRQKKLPKETKSLATICEELLSVFLSKELQCSDWSCR 211
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PL+E Q YAA DA+ L+ IF++FQ K+ +G CSS +EL LD ++
Sbjct: 212 PLSEGQIQYAASDAYYLLGIFDLFQKKITMEGQ-CSSTTEL---TLDRHFSPVV------ 261
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
I ++S Y C L+ IV KY EKI+L E
Sbjct: 262 -------------IECSSSGYDIC----------------SGSCLMSIVTKYSEKIILTE 292
Query: 309 CDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D +TS++K + + ++K +D +WQGPPPWD S+GGDGYPKFLCDVM+EGL
Sbjct: 293 SDAKQRTSRRKEKLKIPANAKCKDK-VDCSSEWQGPPPWDPSIGGDGYPKFLCDVMIEGL 351
Query: 369 AKHLRCVGIDAATPRSKKPEPR 390
AKHLRCVGIDAA P S+KPEPR
Sbjct: 352 AKHLRCVGIDAAIPSSRKPEPR 373
>gi|357122944|ref|XP_003563173.1| PREDICTED: probable exonuclease mut-7 homolog [Brachypodium
distachyon]
Length = 492
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 236/400 (59%), Gaps = 68/400 (17%)
Query: 9 LKIHLVTS-TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSN----------------F 51
+HLV+ + SPE L ++L+ + +V LDAEWKP+R S F
Sbjct: 11 FAVHLVSGGSSSPELPLLLQSLAAARVVALDAEWKPRRRGASAPGPVDGASPALPNPPLF 70
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V++LQLAC+ E S VF++DL ++PL +W L++LF PD LKLGF+
Sbjct: 71 PTVTVLQLACR---------GEEGCSEVFVVDLLAVPLADLWAPLRQLFERPDALKLGFR 121
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G D FDRVE +LD+T++Y +L ++LPKETKSLA IC+E
Sbjct: 122 FKQDLVYLSATFTAALGSDSRFDRVEAFLDVTNVYYYLMGHDRQKRLPKETKSLATICEE 181
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
LL++SLSKELQCSDWS RPL+E Q YAA DA+ L++IF++F KV + S++ D
Sbjct: 182 LLNVSLSKELQCSDWSCRPLSEGQIQYAASDAYYLLDIFDLFHQKVRTEEKCVSTMETSD 241
Query: 231 SSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMD 290
C I ++S Y C D
Sbjct: 242 QH------------------------CPQRAIECSSSGYVIC----------------SD 261
Query: 291 ESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLS 350
+ L I+ KY ++ILL E D ++S++K +++ S +EK D +WQGPPPWD S
Sbjct: 262 DYLTSIITKYSDRILLAESDTKARSSRRKQKQKLSTDAKCKEK-FDCNTEWQGPPPWDPS 320
Query: 351 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
+GGDGYPKFLCDVM+EGLAKHLRCVGIDAATP KKP+PR
Sbjct: 321 VGGDGYPKFLCDVMIEGLAKHLRCVGIDAATPSCKKPQPR 360
>gi|115471903|ref|NP_001059550.1| Os07g0452400 [Oryza sativa Japonica Group]
gi|113611086|dbj|BAF21464.1| Os07g0452400 [Oryza sativa Japonica Group]
Length = 501
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 238/400 (59%), Gaps = 62/400 (15%)
Query: 9 LKIHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQR----------------SHQSNF 51
L +HLVT SPE L R+L+ + +V LDAEWKP+R F
Sbjct: 14 LAVHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPLQF 73
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V+LLQ+AC R + + + A+ VF++DL ++PL + E L+ELF P++LKLGF+
Sbjct: 74 PTVTLLQVAC----RGDGDGGGAAAAEVFVVDLLAVPLAELREPLRELFERPEVLKLGFR 129
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+E
Sbjct: 130 FKQDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEE 189
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
LL + LSKELQCSDWS RPL+E Q YAA DA+ L++IF++F K+ +G C +EL
Sbjct: 190 LLGVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIFDLFHQKIRTEGK-CLPTNELT 248
Query: 231 SSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMD 290
S C D ++S + C D
Sbjct: 249 SDG----------------------HCPQRDAECSSSEDAVCF----------------D 270
Query: 291 ESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLS 350
+ +V KY EKILL E D P++S++K +++ + +EK + +WQG PPWD S
Sbjct: 271 DYFTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCKEK-FEGSTEWQGLPPWDPS 329
Query: 351 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
GGDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPR
Sbjct: 330 AGGDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPR 369
>gi|34394896|dbj|BAC84412.1| unknown protein [Oryza sativa Japonica Group]
Length = 501
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 239/400 (59%), Gaps = 62/400 (15%)
Query: 9 LKIHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQRSHQS----------------NF 51
L +HLVT SPE L R+L+ + +V LDAEWKP+R + F
Sbjct: 14 LAVHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPLQF 73
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V+LLQ+AC R + + + A+ VF++DL ++PL + E L+ELF P++LKLGF+
Sbjct: 74 PTVTLLQVAC----RGDGDGGGAAAAEVFVVDLLAVPLAELREPLRELFERPEVLKLGFR 129
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+E
Sbjct: 130 FKQDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEE 189
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
LL + LSKELQCSDWS RPL+E Q YAA DA+ L++IF++F K+ +G C +EL
Sbjct: 190 LLGVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIFDLFHQKIRTEGK-CLPTNELT 248
Query: 231 SSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMD 290
S C D ++S + C D
Sbjct: 249 SDG----------------------HCPQRDAECSSSEDAVCF----------------D 270
Query: 291 ESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLS 350
+ +V KY EKILL E D P++S++K +++ + +EK + +WQG PPWD S
Sbjct: 271 DYFTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCKEK-FEGSTEWQGLPPWDPS 329
Query: 351 LGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
GGDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPR
Sbjct: 330 AGGDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPR 369
>gi|125558189|gb|EAZ03725.1| hypothetical protein OsI_25856 [Oryza sativa Indica Group]
Length = 501
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 236/398 (59%), Gaps = 62/398 (15%)
Query: 11 IHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQR----------------SHQSNFPR 53
+HLVT SPE L R+L+ + +V LDAEWKP+R FP
Sbjct: 16 VHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPPQFPT 75
Query: 54 VSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFK 113
V+LLQ+AC R + + + A+ VF++DL ++PL + E L+ELF P++LKLGF+FK
Sbjct: 76 VTLLQVAC----RGDGDGGGAAAAEVFVVDLLAVPLAELREPLRELFERPEVLKLGFRFK 131
Query: 114 QDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELL 172
QDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+ELL
Sbjct: 132 QDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEELL 191
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS 232
+ LSKELQCSDWS RPL+E Q YAA DA+ L++IF++F K+ +G C +EL S
Sbjct: 192 GVYLSKELQCSDWSYRPLSEGQIQYAASDAYYLLDIFDLFHQKIRTEGK-CLPTNELTSD 250
Query: 233 NLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDES 292
C D ++S + C D+
Sbjct: 251 G----------------------HCPQRDAECSSSEDAVCF----------------DDY 272
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLG 352
+V KY EKILL E D P++S++K +++ + EK + +WQG PPWD S G
Sbjct: 273 FTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCEEK-FEGSTEWQGLPPWDPSAG 331
Query: 353 GDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
GDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPR
Sbjct: 332 GDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPR 369
>gi|302810633|ref|XP_002987007.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
gi|300145172|gb|EFJ11850.1| hypothetical protein SELMODRAFT_425875 [Selaginella moellendorffii]
Length = 797
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 206/391 (52%), Gaps = 63/391 (16%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P I LV S + F AL +SS++ LDAEWKP S PRVSLLQ+AC+ F
Sbjct: 12 PSSIRLVDSIDGEAFQGFLLALQESSVIALDAEWKPV-SVAGTHPRVSLLQIACRKRD-F 69
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
PESD +VF++D+ SIP ++ + L+E + ILKLGFK +QDLI L+++ S
Sbjct: 70 GPESD-----LVFIVDVLSIPASALLQPLEEALETSRILKLGFKLRQDLINLAASLSSTA 124
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
F EPY+DI +Y+ + K RKLP +T SL++IC+++ L K LQCSDW
Sbjct: 125 ---SFS-CEPYIDIGKLYHEVKRKN-PRKLPGDTPSLSHICRDVFGRPLCKSLQCSDWEL 179
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKV--AQKGNSCSSISELDSSNLDLGLKGILEKP 245
RPLTEEQ +YAA DAHCL+ I + + Q+ + +S+ G+ +L P
Sbjct: 180 RPLTEEQISYAAADAHCLLAILDALHPYIIDMQRSKAVASV----------GIARLL-YP 228
Query: 246 D--IGNKTVRFK-LCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGE 302
D + RF+ + E D R + ++YL T SL
Sbjct: 229 DEELSPLVTRFRSMSEKAD--RTGKF------------LAYLLTFQQTLSL--------- 265
Query: 303 KILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCD 362
KKK R R + D+ + +W GPPPWD +GGDG PKFLCD
Sbjct: 266 ----------QADPKKKIRTRR--VRDTNRSQGQTEFEWCGPPPWDPVVGGDGCPKFLCD 313
Query: 363 VMVEGLAKHLRCVGIDAATPRSKKPEPRSNI 393
+M+EGLA+ LRCVGIDAA P KP+ R I
Sbjct: 314 IMIEGLARQLRCVGIDAACPHRLKPDARQLI 344
>gi|168037922|ref|XP_001771451.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677178|gb|EDQ63651.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 565
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 210/390 (53%), Gaps = 27/390 (6%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+I V S + EF AL ++ +V +DAEWKP R + PRVS++Q++C R
Sbjct: 29 RILFVDSPRTEEFEVFLIALEEAMIVAMDAEWKPVRRAGVS-PRVSIMQISC----RIRK 83
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+ + V+F+LDL ++ LK + SP ILKLGF FKQD ++LS++F +
Sbjct: 84 DEFITGEEVIFVLDLLALSAADFAFPLKTMLCSPRILKLGFAFKQDQLHLSASFPGPEAN 143
Query: 130 IGFDRVEPYLDITSIYNHLHH------KQLGRKLP-KETKSLANICKELLDISLSKELQC 182
FD+VEPY+DI +Y H K G++ T SL I K +L L K+ QC
Sbjct: 144 GCFDKVEPYIDIAKLYKEFLHVNFSNLKHKGKRFVLGGTHSLTAISKAVLGHPLCKDAQC 203
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS--SNLDLGLKG 240
S+W RPL+++Q YAA D HCL+ +F+ + ++ E + G
Sbjct: 204 SNWEQRPLSQDQILYAAADTHCLLALFDTLLSDAFALISPAPTLVEAGKIRETVPATPAG 263
Query: 241 ILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKY 300
+ P +G+ T ++ EA +R + S P G V + + E K V+KY
Sbjct: 264 YIFSPRMGSAT---EMVEA--ALRPSPPSSPLEPVGTVKQETS------SERYAKFVKKY 312
Query: 301 GEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFL 360
E++L+ E ++ +++ +R+ + + + L+ DW GP PWD+ +GGDG PKFL
Sbjct: 313 SERLLVNEESRSRSRARRPRARRARESLKNPDDALN--LDWVGPAPWDVRIGGDGTPKFL 370
Query: 361 CDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
CDVMVEGLA+ LRCVG+DAA+ +KK +PR
Sbjct: 371 CDVMVEGLARQLRCVGVDAASSPTKKSDPR 400
>gi|72388621|gb|AAZ67953.1| At5g24340-like protein [Arabidopsis lyrata]
Length = 163
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 124/169 (73%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F K + I+ DS ++GL+ IL + D +K V
Sbjct: 61 KLYAATDAHCLLQIFDVF------KAHLVEGITVQDSREKNVGLQEILTESDYSSKIVTA 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + VVSR + LNTMPMDE+L+KI RKYGE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANRVVSRKTTLNTMPMDENLLKIFRKYGER 163
>gi|72388593|gb|AAZ67939.1| At5g24340 [Arabidopsis thaliana]
gi|72388595|gb|AAZ67940.1| At5g24340 [Arabidopsis thaliana]
gi|72388597|gb|AAZ67941.1| At5g24340 [Arabidopsis thaliana]
gi|72388599|gb|AAZ67942.1| At5g24340 [Arabidopsis thaliana]
gi|72388601|gb|AAZ67943.1| At5g24340 [Arabidopsis thaliana]
gi|72388603|gb|AAZ67944.1| At5g24340 [Arabidopsis thaliana]
gi|72388609|gb|AAZ67947.1| At5g24340 [Arabidopsis thaliana]
gi|72388611|gb|AAZ67948.1| At5g24340 [Arabidopsis thaliana]
Length = 163
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 126/169 (74%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D +K V
Sbjct: 61 KLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYSSKIVTV 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGER 163
>gi|72388605|gb|AAZ67945.1| At5g24340 [Arabidopsis thaliana]
gi|72388607|gb|AAZ67946.1| At5g24340 [Arabidopsis thaliana]
Length = 163
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 125/169 (73%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D +K V
Sbjct: 61 KLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYSSKIVTV 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + GVV R LNTMPMDE+L+KIVRK+GE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANGVVPRKMTLNTMPMDENLLKIVRKFGER 163
>gi|72388613|gb|AAZ67949.1| At5g24340 [Arabidopsis thaliana]
gi|72388615|gb|AAZ67950.1| At5g24340 [Arabidopsis thaliana]
gi|72388617|gb|AAZ67951.1| At5g24340 [Arabidopsis thaliana]
gi|72388619|gb|AAZ67952.1| At5g24340 [Arabidopsis thaliana]
Length = 163
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 125/169 (73%), Gaps = 6/169 (3%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS RPLTEEQ
Sbjct: 1 VKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQ 60
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRF 254
K YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + +K V
Sbjct: 61 KLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESYYSSKIVTV 114
Query: 255 KLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEK 303
KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+
Sbjct: 115 KLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGER 163
>gi|147801797|emb|CAN72321.1| hypothetical protein VITISV_000999 [Vitis vinifera]
Length = 155
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/125 (70%), Positives = 106/125 (84%), Gaps = 3/125 (2%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+IHLV S +SPEFT L ++L+QSSL+GLDAEWKP R+ QS+FP VSLLQLACQ PR P
Sbjct: 4 EIHLVASIDSPEFTLLTQSLTQSSLIGLDAEWKPIRTQQSSFPTVSLLQLACQLXPRLGP 63
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+S +S +VFL DLS+I L SI+ELL+++FVSPD+LKLGF+FKQDLIYLSSTFCSQGCD
Sbjct: 64 DSAKS---LVFLXDLSAIXLSSIYELLRDVFVSPDVLKLGFRFKQDLIYLSSTFCSQGCD 120
Query: 130 IGFDR 134
GFDR
Sbjct: 121 PGFDR 125
>gi|302807740|ref|XP_002985564.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
gi|300146770|gb|EFJ13438.1| hypothetical protein SELMODRAFT_122415 [Selaginella moellendorffii]
Length = 442
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 126/206 (61%), Gaps = 12/206 (5%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P I LV S + F AL +SS++ LDAEWKP + PRVSLLQ+AC+ F
Sbjct: 12 PSSIRLVDSIDGEAFQGFLLALQESSVIALDAEWKPVLVAGMH-PRVSLLQIACRKRD-F 69
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
PESD +VF++D+ SIP ++ + L+E + ILKLGFK +QDLI L+++ S
Sbjct: 70 GPESD-----LVFIVDVLSIPASALLQPLEEALETSRILKLGFKLRQDLINLAASLSSTA 124
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
F EPY+DI +Y+ + K RKLP +T SL++IC+++ L K LQCSDW
Sbjct: 125 ---SFS-CEPYIDIGKLYHEVKRKN-PRKLPGDTPSLSHICRDVFGRPLCKSLQCSDWEL 179
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQ 213
RPLTEEQ +YAA DAHCL+ I +
Sbjct: 180 RPLTEEQISYAAADAHCLLAILDALH 205
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 317 KKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVG 376
KKK R R + D+ + +W GPPPWD +GGDG PKFLCD+M+EGLA+ LRCVG
Sbjct: 255 KKKIRTRR--VRDTNRSQGQAEFEWCGPPPWDPVVGGDGCPKFLCDIMIEGLARQLRCVG 312
Query: 377 IDAATPRSKKPEPRSNI 393
IDAA P KP+ R I
Sbjct: 313 IDAACPHRLKPDARQLI 329
>gi|219362869|ref|NP_001137101.1| uncharacterized protein LOC100217277 [Zea mays]
gi|194698364|gb|ACF83266.1| unknown [Zea mays]
Length = 265
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 7/101 (6%)
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDI---GDWQGPPPWDL 349
L+ IV KY EKI+L E D P+TS++K + + + + KR D++ +WQGPPPWD
Sbjct: 37 LMSIVTKYSEKIILTESDAKPRTSRRKEKLK----IPANAKRKDNVDCSSEWQGPPPWDP 92
Query: 350 SLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
S+GGDGYPKFLCDVM+EGLAKHLRCVGIDAA P SKKPEPR
Sbjct: 93 SIGGDGYPKFLCDVMIEGLAKHLRCVGIDAAIPSSKKPEPR 133
>gi|388514807|gb|AFK45465.1| unknown [Lotus japonicus]
Length = 236
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 83/107 (77%)
Query: 287 MPMDESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPP 346
MPMDE L+ IV+K+G++ILL+E D+ PKTSKKK +K + + + LD +WQG P
Sbjct: 1 MPMDEFLLNIVKKHGDRILLKESDRKPKTSKKKRKKPLPINGNLKGNHLDKFDEWQGISP 60
Query: 347 WDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRSNI 393
WD S+GGDGYP+FLCDVMVEGLAKHLRCVGIDAA P SKKPEPR I
Sbjct: 61 WDPSVGGDGYPRFLCDVMVEGLAKHLRCVGIDAAIPYSKKPEPRELI 107
>gi|125600097|gb|EAZ39673.1| hypothetical protein OsJ_24106 [Oryza sativa Japonica Group]
Length = 310
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Query: 289 MDESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWD 348
D+ +V KY EKILL E D P++S++K +++ + +EK + +WQG PPWD
Sbjct: 78 FDDYFTSVVMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCKEK-FEGSTEWQGLPPWD 136
Query: 349 LSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPR 390
S GGDG PKFLCDVM+EGLAKHLRCVGIDAATP S+KPEPR
Sbjct: 137 PSAGGDGCPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPR 178
>gi|125600096|gb|EAZ39672.1| hypothetical protein OsJ_24105 [Oryza sativa Japonica Group]
Length = 219
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 117/218 (53%), Gaps = 41/218 (18%)
Query: 9 LKIHLVTST-ESPEFTHLARALSQSSLVGLDAEWKPQRSHQS----------------NF 51
L +HLVT SPE L R+L+ + +V LDAEWKP+R + F
Sbjct: 14 LAVHLVTGGGSSPEHALLLRSLAAARVVALDAEWKPRRRGPAVADDPSAAAAATPPPLQF 73
Query: 52 PRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFK 111
P V+LLQ+AC+ + E L+ELF P++LKLGF+
Sbjct: 74 PTVTLLQVACR--------------------GDGDGGGAAAAEPLRELFERPEVLKLGFR 113
Query: 112 FKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKE 170
FKQDL+YLS+TF + G GF+RVEP+LD+T+ Y +L + ++LP+ETKSLA IC+E
Sbjct: 114 FKQDLVYLSATFAAALGSSAGFERVEPFLDVTNAYYYLKGHDMQKRLPRETKSLATICEE 173
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
LL + LSK L R + +++ I +H I +
Sbjct: 174 LLGVYLSKSLAI---YARAIESAYQSFHGIQSHTPIAL 208
>gi|414589141|tpg|DAA39712.1| TPA: hypothetical protein ZEAMMB73_184842 [Zea mays]
Length = 274
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 87/162 (53%), Gaps = 30/162 (18%)
Query: 1 MDCTYRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQS---------- 49
MD P +HLVT S L R+L+ + +V LDAEWKP+R
Sbjct: 115 MDHAPAPPFAVHLVTGGGSSSGIALLLRSLAAARVVALDAEWKPRRRGSPAAADPAALGD 174
Query: 50 -------------NFPRVSLLQLACQPGPRF-NPESDESNASVVFLLDLSSIPLPSIWEL 95
FP V+LLQ+AC RF + E S VF++DL S+PL +W
Sbjct: 175 DTTPASETSPAPPKFPTVTLLQVAC----RFSDGGGGEGERSEVFVVDLLSVPLADLWAP 230
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRVE 136
L+ELF P+ LKLGF+FKQDL+YLSSTF + GCD GFDRV
Sbjct: 231 LRELFERPETLKLGFRFKQDLVYLSSTFSAALGCDSGFDRVR 272
>gi|194691416|gb|ACF79792.1| unknown [Zea mays]
Length = 160
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 86/161 (53%), Gaps = 30/161 (18%)
Query: 1 MDCTYRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQS---------- 49
MD P +HLVT S L R+L+ + +V LDAEWKP+R
Sbjct: 1 MDHAPAPPFAVHLVTGGGSSSGIALLLRSLAAARVVALDAEWKPRRRGSPAAADPAALGD 60
Query: 50 -------------NFPRVSLLQLACQPGPRFNPESDESNA-SVVFLLDLSSIPLPSIWEL 95
FP V+LLQ+AC RF+ S VF++DL S+PL +W
Sbjct: 61 DTTPASETSPAPPKFPTVTLLQVAC----RFSDGGGGEGERSEVFVVDLLSVPLADLWAP 116
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRV 135
L+ELF P+ LKLGF+FKQDL+YLSSTF + GCD GFDRV
Sbjct: 117 LRELFERPETLKLGFRFKQDLVYLSSTFSAALGCDSGFDRV 157
>gi|427785563|gb|JAA58233.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 598
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 25/195 (12%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+DAEWKP + R+SL+QLA N V+ +L LS I W
Sbjct: 380 VVGIDAEWKPTMGLTPS--RLSLVQLAVW-----------DNVYVLDMLKLSEILSEEQW 426
Query: 94 -ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH--- 149
+L ++ S +ILKLGF +DL L+ T G +V+ +D+ S L
Sbjct: 427 GQLYTDVLSSNEILKLGFGIAEDLKLLAETIKLPG-----GKVQNVVDLCSFAEKLRCDC 481
Query: 150 HKQLGRKLPKET--KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
+ +PKE K L+ + + LL + L+K+ QCSDW NRPL + Q YAA+DA CL++
Sbjct: 482 PTLMKPVVPKERGHKGLSELTRTLLGLPLNKDEQCSDWENRPLRQSQMKYAALDAFCLLQ 541
Query: 208 IF-NIFQVKVAQKGN 221
++ +++ AQ+ N
Sbjct: 542 LYEELYKRADAQQIN 556
>gi|270003369|gb|EEZ99816.1| hypothetical protein TcasGA2_TC002596 [Tribolium castaneum]
Length = 1249
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IHL+ S ES E L L +VG+D EWKP Q N ++L+Q+A +
Sbjct: 758 IHLIDSEESFE-RFLDGGLQDVEVVGIDCEWKPNFGSQKN--ELALMQIASRKN------ 808
Query: 71 SDESNASVVFLLDLSSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
VF+LD+ SI +P +W EL K LF + DILKLGF F D++ + +
Sbjct: 809 --------VFILDIISIGTKVPHLWQELGKFLFNNCDILKLGFGFTSDILMIKHSLP--- 857
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETK----SLANICKELLDISLSKELQCS 183
++ F + L K LP E + SL + + L L K Q S
Sbjct: 858 -ELNFTPKQVGFLDLLSLWKLLEKYPKVVLPYEVQGSGPSLGTLVNQCLGRPLDKSDQFS 916
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+W RPL Q YAA+DA+CLIE++++ +
Sbjct: 917 NWEKRPLRNSQLVYAALDAYCLIEVYDVIK 946
>gi|414589142|tpg|DAA39713.1| TPA: hypothetical protein ZEAMMB73_184842 [Zea mays]
Length = 135
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 7/75 (9%)
Query: 293 LVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDI---GDWQGPPPWDL 349
L+ IV KY EKI+L E D P+TS++K + + + + KR D++ +WQGPPPWD
Sbjct: 37 LMSIVTKYSEKIILTESDAKPRTSRRKEKLK----IPANAKRKDNVDCSSEWQGPPPWDP 92
Query: 350 SLGGDGYPKFLCDVM 364
S+GGDGYPKFLCDVM
Sbjct: 93 SIGGDGYPKFLCDVM 107
>gi|301100864|ref|XP_002899521.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103829|gb|EEY61881.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1101
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P S + + S+LQ+AC VF+ D + + + E
Sbjct: 922 LGLDAEWRPD-SRATVPSKCSILQVACD--------------DYVFIFDFMEMAIGDLEE 966
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT-SIYNHLHHKQL 153
L + LF S I+K+GF D+ L +F C FD LD + + H
Sbjct: 967 LFEHLFTSDTIVKIGFAINGDIKRLRWSFPEVKC---FDTFVNVLDFSFDTFVATTHLAD 1023
Query: 154 GRKLPKET----------------KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
G +P ++ K L+ K+ L++ LSK Q SDW RPLT +Q Y
Sbjct: 1024 GTIIPTQSDDTSSLDKLQRRRRRQKGLSTYIKQALELPLSKLQQKSDWERRPLTTQQVGY 1083
Query: 198 AAIDAHCLIEIFNIFQVKVAQK 219
AA+DA+CL+ + Q VA K
Sbjct: 1084 AALDAYCLL----MLQDAVASK 1101
>gi|427779777|gb|JAA55340.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 626
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 45/241 (18%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
+H+V + + + +VG+DAEWKP + R+SL+QLA
Sbjct: 359 VHMVDTADG--LDTCIEVIKDYDVVGIDAEWKPTMGLTPS--RLSLVQLAVW-------- 406
Query: 71 SDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------ 123
N V+ +L LS I W +L ++ S +ILKLGF +DL L+ T
Sbjct: 407 ---DNVYVLDMLKLSEILSEEQWGQLYTDVLSSNEILKLGFGIAEDLKLLAETIKLPGGK 463
Query: 124 -----------------CSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKET-- 161
C + +V+ +D+ S L + +PKE
Sbjct: 464 VQNVVDLCSFAEKLRCDCPXTIKLPGGKVQNVVDLCSFAEKLRCDCPTLMKPVVPKERGH 523
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF-NIFQVKVAQKG 220
K L+ + + LL + L+K+ QCSDW NRPL + Q YAA+DA CL++++ +++ AQ+
Sbjct: 524 KGLSELTRTLLGLPLNKDEQCSDWENRPLRQSQMKYAALDAFCLLQLYEELYKRADAQQI 583
Query: 221 N 221
N
Sbjct: 584 N 584
>gi|345806145|ref|XP_003435395.1| PREDICTED: probable exonuclease mut-7 homolog [Canis lupus
familiaris]
Length = 921
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ IH + S E H A L +VG+D EW+P P+ S++Q
Sbjct: 356 DGYYQPPISREDIHFLASWED-LARHEAELLQPGQVVGVDLEWRPSFG-TGGRPQASIMQ 413
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPS-------IWELLKELFVSPDILKLGFK 111
+A VFLLDL + P+ L+ +L P I KLG+
Sbjct: 414 VAV--------------GGRVFLLDLPLLSQPTGGQASQAFCRLVSQLLSDPSITKLGYG 459
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKETKSLANIC 168
DL L ++ C + ++ LD+ ++ + LGR + + L+ +
Sbjct: 460 MAGDLRSLGAS-CPTLAHVE-KQLRGGLDLLQVHRQMRIADMPALGRGEARGLRGLSLLV 517
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L L K Q S+W RPL+EEQ YAA DA+CL+E++
Sbjct: 518 QQVLGRPLDKAQQLSNWDRRPLSEEQLVYAAADAYCLLEVYQTL 561
>gi|325186923|emb|CCA21467.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1069
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 20/175 (11%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ +D+EW+P+ S +S + S++Q+AC+ D S F+ DL ++ + +
Sbjct: 905 IAIDSEWRPETSRKSMSSKCSIVQIACK---------DHS-----FIFDLMTLKMKDMET 950
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+ L S +I+KL + F+ DL L +F C F+ + +D+ L +
Sbjct: 951 MFAHLLQSTEIVKLVYNFQGDLKRLKYSFPEAAC---FEEIRNVVDLAKPDPILAAEN-- 1005
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L ++++ L+++ K L L K +Q SDW RPL+ Q YAA+DA+ L+ I+
Sbjct: 1006 -NLARKSRGLSDLAKSSLGFPLCKRMQRSDWEQRPLSSAQIEYAALDAYVLLMIY 1059
>gi|449015749|dbj|BAM79151.1| unknown ribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1224
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 24/185 (12%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
VGLD EW+P R+ PR +LLQ+A P F + +A +F + L+ E
Sbjct: 588 VGLDVEWRPVRTSGLQ-PRCALLQIAF-PADVFLVDLLRIDADALFAMRLN--------E 637
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH------- 147
L+ LF SP ILK+GF F D + L ++ C FD + D+ I +
Sbjct: 638 ALRRLFRSPAILKVGFCFSSDFVRLRHSYLGLSC---FDAIVALRDLDRIGSEGTDAFCA 694
Query: 148 ----LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
L + R+ + T LA + L + K +CSDW RPLT Q YAA+DA
Sbjct: 695 DLATLVGRTSVRRRGRLTVGLAQLVAVFLGRAFDKRPRCSDWEARPLTRAQIEYAALDAW 754
Query: 204 CLIEI 208
L+ +
Sbjct: 755 VLLAL 759
>gi|303272145|ref|XP_003055434.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463408|gb|EEH60686.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 590
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP--- 90
+VGLD EWKP S P VS+LQ+A + + F++DL + P
Sbjct: 124 VVGLDGEWKPG----SRTP-VSILQVATR--------------ADAFVVDLFATAPPDAP 164
Query: 91 ---SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS-QGCDIGFDRVEP--YLDITSI 144
++ L +L S I KLGF F DL + +++ + +G +P +D+ +
Sbjct: 165 ASDALDAFLADLLGSERIYKLGFSFGYDLSRMRASYPHLRSLRVGAGHPQPRAMIDVKQV 224
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N ++ ++ LA + K L +LSK QCSDWS RPLT Q +YAA DA
Sbjct: 225 ANVASANRMNTRV-----GLATLTKFTLGATLSKAEQCSDWSRRPLTAAQLSYAAADAFY 279
Query: 205 LIEIFN 210
L IF+
Sbjct: 280 LCVIFD 285
>gi|348513863|ref|XP_003444460.1| PREDICTED: probable exonuclease mut-7 homolog [Oreochromis
niloticus]
Length = 864
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 34/232 (14%)
Query: 5 YRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLAC 61
Y+ PL K+H V + E+ E + L + +VG+D EW+P S +V+L+QLA
Sbjct: 340 YQVPLTKDKVHFVDTPEALERCQ-SIVLKEGVVVGVDMEWQPTFGCIST-QQVALIQLAV 397
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPL---PSIWELLKELFVSPDILKLGFKFKQDLIY 118
SD VFL+DL + P ++ LF +LKLG+ DL
Sbjct: 398 ---------SDR-----VFLVDLCARRFCEHPETIRFIRSLFSQQSVLKLGYGMAGDLKC 443
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL--PKET--------KSLANIC 168
L +T+ D ++E LD+ SI+ + H L R PKE K L+ +
Sbjct: 444 LLATWPQLQEDPL--KMEGMLDLLSIHKKIQHSALSRTHNGPKEVLVGEDCAEKGLSLLV 501
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+++L L K Q S+W RPL Q YA DA+CL+E++++ A G
Sbjct: 502 QQVLGRPLDKTEQMSNWEKRPLRISQIRYAVADAYCLLEVYSVVSRNPASFG 553
>gi|170051623|ref|XP_001861848.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872804|gb|EDS36187.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 925
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
++HLV S E +F + LSQ SLV D+EWKP + V+++QLA +
Sbjct: 432 RVHLVDSRE--KFFAMTSDLSQQSLVAFDSEWKPTFGGAN---EVAVIQLATRDD----- 481
Query: 70 ESDESNASVVFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V+L+D L S S W L +F D+LKL F D +
Sbjct: 482 ---------VYLVDVLVSQLQGSDWSELASVFNRDDVLKLAFAPSTDFNMFQKALPAFNV 532
Query: 129 DIGFDRVEPYLDITSIY---NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
G LD+ ++ + + Q K ++L+N+ K L L K Q S+W
Sbjct: 533 SYGPQSGSTILDLQVLWRKVDAIKSFQFPFKEEITNQNLSNLSKLCLGKKLDKSNQFSNW 592
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIF--QVKVAQ 218
+ RPL EQ YAA+DA+ L++I+++ Q+K A+
Sbjct: 593 AQRPLRREQIQYAALDAYVLLQIYDVIAKQLKAAR 627
>gi|350396853|ref|XP_003484688.1| PREDICTED: probable exonuclease mut-7 homolog [Bombus impatiens]
Length = 942
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 44/208 (21%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L S+VG+D EWKP + ++L+Q+A + V++LD+
Sbjct: 414 LDNGLRDVSIVGIDLEWKP--CFGTKQTELALIQIATKAN--------------VYILDV 457
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--------CSQGCDIGFD 133
++I L +W +L K LF + +ILKLGF QD+ + ++ C QG
Sbjct: 458 TTIGNKLIELWIKLSKALFENRNILKLGFGIAQDITVIRNSLPAFSKIKICGQG------ 511
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSN 187
YLDI ++ L + P E+ K+L+ + + L L+K Q S+W
Sbjct: 512 ----YLDIVHLWKKLV-EDYKFVFPHESDEQFTKKNLSKLVELCLGQKLNKSDQFSNWEQ 566
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
RPL E Q YAA+DA+CL+EI+ +++
Sbjct: 567 RPLRESQIIYAALDAYCLLEIYATLEIQ 594
>gi|297848138|ref|XP_002891950.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337792|gb|EFH68209.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 569
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 32/179 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+D EWKP S +VS++Q+ SD + +F+LDL + +
Sbjct: 381 VVGIDCEWKPNYIKGSKQNKVSIMQIG----------SD----TKIFILDLIKLYNDATE 426
Query: 94 EL---LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
L L ++ S LKLG+ F+ D+ L+ ++ C F+R + LDI +++
Sbjct: 427 MLDNCLSQILQSKSTLKLGYNFQCDVKQLALSYGDLKC---FERYDMLLDIQNVFK---- 479
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ LA + K++L +SL+K + SDW RPLT+ Q YAA+DA LI IF
Sbjct: 480 --------EPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLTQNQLEYAALDAAVLIHIF 530
>gi|242000324|ref|XP_002434805.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498135|gb|EEC07629.1| conserved hypothetical protein [Ixodes scapularis]
Length = 492
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 53 RVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFK 111
R+SL+QLA G V+ +L LS + S W +L E+ S DILKLG+
Sbjct: 293 RLSLVQLAVWDG-----------VYVLDILKLSEVLGESHWRQLYTEILSSDDILKLGYG 341
Query: 112 FKQDLIYLSSTF-CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLA 165
+DL LS C + ++D+ S L K P +E K L+
Sbjct: 342 IVEDLKLLSEVAKCPSA------KARNFIDLCSFSEKLRQKHPSLMKPVIPKDREHKGLS 395
Query: 166 NICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF-NIFQVKVAQKGNSCS 224
+ + LL + L+K+ QCSDW NRPL Q YAA+DA CL++++ +F+ + N
Sbjct: 396 ELTRTLLGLPLNKDEQCSDWENRPLRSSQMRYAALDAFCLLQVYEELFKRAEGEDMNLRE 455
Query: 225 SISELDSS 232
I E+ S
Sbjct: 456 LIQEVRDS 463
>gi|242087595|ref|XP_002439630.1| hypothetical protein SORBIDRAFT_09g017250 [Sorghum bicolor]
gi|241944915|gb|EES18060.1| hypothetical protein SORBIDRAFT_09g017250 [Sorghum bicolor]
Length = 562
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL---P 90
++G+D EW+P + +VS++Q+A SD+ V F+ DL +
Sbjct: 376 IIGMDCEWRPNFEKNTKPSKVSIIQIA----------SDK----VAFIFDLIKLYEDDPK 421
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
++ L+ + S ILKLG+ + DL L+ ++ C F E LD+ ++ +
Sbjct: 422 TLDSCLRRIMCSSKILKLGYDIQCDLHQLTQSYGELDC---FQSYEMLLDMQKLFKGV-- 476
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
T L+ + KE+L L+K + S+W RPLT+ QK YAA+DA L+ IF+
Sbjct: 477 ----------TGGLSGLSKEILGAGLNKSRRNSNWEQRPLTQNQKEYAALDAVVLVHIFH 526
Query: 211 IFQVKVAQKGNSCSSISELDS 231
+ AQ G S S E S
Sbjct: 527 EHMRRQAQFGVSEGSKVEWKS 547
>gi|428172826|gb|EKX41732.1| hypothetical protein GUITHDRAFT_112147 [Guillardia theta CCMP2712]
Length = 1559
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLA-------------CQPGPRFNPESDESNASVV 79
+LVGLD EWK R S+LQ+A C+ E + S
Sbjct: 760 TLVGLDVEWKAV-FKAGEVSRASILQVAFRRNILIFDLLWMCREKEATKEEDELSRGDGG 818
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L +L V+P+I+KLGF K DL L +++ C F V L
Sbjct: 819 LYGG----------GILHDLLVNPNIIKLGFDLKNDLEKLRNSYPLSSC---FLFVSSLL 865
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
D++ K LGR SL + L L K +Q SDW RPL+EEQ YAA
Sbjct: 866 DVSK----WSLKLLGRS----GNSLKKTVQACLGKDLDKRMQISDWEARPLSEEQVQYAA 917
Query: 200 IDAHCLIEIFN 210
+DAHCL+ +F+
Sbjct: 918 LDAHCLLSVFD 928
>gi|340716154|ref|XP_003396566.1| PREDICTED: probable exonuclease mut-7 homolog [Bombus terrestris]
Length = 943
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 36/204 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L S+VG+D EWKP + ++L+Q+A + V++LD+
Sbjct: 415 LDNGLKDVSIVGIDLEWKP--CFGTKQTGLALIQIATKAN--------------VYILDV 458
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRV----EP 137
++I L +W +L K LF + +ILKLGF QD+ + ++ F ++ +
Sbjct: 459 TTIGNKLTELWIKLSKALFENRNILKLGFGIAQDVTVIRNSLS------AFSKIKISGQG 512
Query: 138 YLDITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLT 191
YLDI ++ L + P E+ K+L+ + + L L+K Q S+W RPL
Sbjct: 513 YLDIVHLWKKLV-EDYKFVFPHESDEQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLR 571
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVK 215
E Q YAA+DA+CL+EI+ +++
Sbjct: 572 ESQIIYAALDAYCLLEIYATLEIQ 595
>gi|356576837|ref|XP_003556536.1| PREDICTED: uncharacterized protein LOC100797818 [Glycine max]
Length = 571
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
R + ++GLD EWKP S +VS++Q+A + +VF+ DL
Sbjct: 370 TRHIKGFKVIGLDCEWKPNYVKGSKPNKVSIMQIASE--------------KMVFIFDLI 415
Query: 86 SI--PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+ +P I + L + +SP ILKLG+ F+ D L+ ++ C F E LDI
Sbjct: 416 KLHKEVPDILDDCLSCILLSPRILKLGYNFQCDAKQLAYSYEELRC---FKNYEMLLDIQ 472
Query: 143 SIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+++ K P+ LA + +++L SL+K + S+W RPLT Q YAA+DA
Sbjct: 473 NVF----------KEPR--GGLAGLAEKILGASLNKTRRNSNWEQRPLTPNQLEYAALDA 520
Query: 203 HCLIEIFN 210
L+ IF+
Sbjct: 521 VVLVHIFH 528
>gi|299472524|emb|CBN77309.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 648
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 39/183 (21%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL-------SSI 87
VGLD E P + R +LLQ+A ++ VFL DL +S+
Sbjct: 449 VGLDVENSPTTN------RATLLQVA--------------TSTDVFLFDLIALLGRAASL 488
Query: 88 PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+ ++ +++L P I+KLGF F D L TF S GF R+ L++ + +
Sbjct: 489 EVSRQFDATVEDLLTDPHIVKLGFSFAHDATALRKTFPSA---RGFRRIAALLEVGELSS 545
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ LGR P SL+ C+ L L K S W RPLT +Q YAA+DAHCL+
Sbjct: 546 AV----LGRSTP----SLSKTCEAWLGKPLDKTECASKWDVRPLTADQVRYAALDAHCLV 597
Query: 207 EIF 209
IF
Sbjct: 598 GIF 600
>gi|224123698|ref|XP_002330186.1| predicted protein [Populus trichocarpa]
gi|222871642|gb|EEF08773.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 32/183 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI--PLPS 91
+VGLD EWKP S +VS++Q+A SD++ VF+ DL + +P
Sbjct: 377 VVGLDCEWKPNYVKGSKPNKVSIMQIA----------SDKT----VFIFDLIKLFEDIPD 422
Query: 92 IWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
I + L + SP ILKLG+ F+ D+ L+ ++ C F+ E LDI +++
Sbjct: 423 ILDNCLSRILQSPRILKLGYNFQCDIKQLAHSYGELRC---FNNYEKLLDIQNVFK---- 475
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
L+ + +++L L+K + S+W RPL Q YAA+DA L+ IF+
Sbjct: 476 --------DARGGLSGLAEKILGTGLNKTRRNSNWELRPLGHNQLEYAALDAAVLVHIFH 527
Query: 211 IFQ 213
F
Sbjct: 528 HFH 530
>gi|334183377|ref|NP_176027.2| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
gi|332195255|gb|AEE33376.1| 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana]
Length = 589
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 32/179 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+D EWKP S +VS++Q+ SD + +F+LDL + +
Sbjct: 380 VVGIDCEWKPNYIKGSKQNKVSIMQIG----------SD----TKIFILDLIKLYNDASE 425
Query: 94 EL---LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
L L + S LKLG+ F+ D+ L+ ++ C F+R + LDI +++N
Sbjct: 426 ILDNCLSHILQSKSTLKLGYNFQCDIKQLALSYGDLKC---FERYDMLLDIQNVFN---- 478
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ LA + K++L +SL+K + SDW RPL++ Q YAA+DA LI IF
Sbjct: 479 --------EPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLEYAALDAAVLIHIF 529
>gi|348677647|gb|EGZ17464.1| hypothetical protein PHYSODRAFT_351203 [Phytophthora sojae]
Length = 406
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
I V S + +F++ A L + L+GLD E +P +LLQ+A +
Sbjct: 27 IQFVASKK--DFSYCAERLRSAQLMGLDTETRPTWGKTRGPNPCALLQIAVR-------- 76
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
D S+ VF+LDL +P L +F+S I+KLG F QDL L+ ++ C
Sbjct: 77 -DASHTEEVFILDLRRLPATVYNSTLTSVFLSKKIIKLGQSFLQDLKELAQSYPQASC-- 133
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
F + +++ N L G P SL + L L+K Q S+W RPL
Sbjct: 134 -FTVCKGVVEV----NDLSIALAGAHNPL---SLQKLVFFYLHRKLAKTQQMSNWERRPL 185
Query: 191 TEEQKNYAAIDAHCLIEIFN--IFQVKVAQKGNSCSSISELDSSNL 234
T Q +YAA DA LI +++ + ++ Q+G S ++ + NL
Sbjct: 186 TASQLHYAAADALVLIHLYDELLMRISKKQQGFELSEVTNVLDINL 231
>gi|345496472|ref|XP_001601894.2| PREDICTED: probable exonuclease mut-7 homolog [Nasonia vitripennis]
Length = 978
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 36/209 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L AL ++VG+D+EWKP S + P ++L+Q+A E+N V++LD+
Sbjct: 406 LDHALRNVNVVGIDSEWKPSFSIRK--PELALIQIAT-----------ETN---VYILDV 449
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCS----QGCDIGFDRVEP 137
+++ + +W EL LF + ILKLGF D+ + + + + C G
Sbjct: 450 TTLGNKVQHLWSELGITLFNNRSILKLGFGIAHDIAVIRESLPALSNIRACGDG------ 503
Query: 138 YLDITSIYNHLHHKQLGRKLPKE------TKSLANICKELLDISLSKELQCSDWSNRPLT 191
YLD++ ++ L K+ P + ++L+ + + L L+K Q S+W RPL
Sbjct: 504 YLDLSHLWKKLL-KEDNFVFPFKGDECFTNENLSKLVELCLGQRLNKSDQFSNWERRPLR 562
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
E Q YA++DA+CL+E++N+ V+ + G
Sbjct: 563 ESQILYASLDAYCLLEVYNVLAVQCDRLG 591
>gi|387152866|ref|YP_005701802.1| 3'-5' exonuclease [Desulfovibrio vulgaris RCH1]
gi|311233310|gb|ADP86164.1| 3'-5' exonuclease [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
++ LV + E E L S++G D E +P R + N P SL+QLAC
Sbjct: 28 EVRLVRTEE--ELADALDVLRSDSVLGFDTETRPTFRKGKVNLP--SLVQLAC------- 76
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
A VV+L+ L+ +PL E+L +L P I+K G + D+ L + +
Sbjct: 77 -------ADVVYLIQLNWVPLG---EMLADLLSDPAIIKTGVAVRDDIRDLQKLYAFRDG 126
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ + ++ R L ET L N+ L I +SK QCS+WSNR
Sbjct: 127 GV-----------------VDLGEVARDLGLETHGLRNLAANFLGIRISKGAQCSNWSNR 169
Query: 189 PLTEEQKNYAAIDAHCLIEI 208
L +Q YAA DA EI
Sbjct: 170 ELGPQQVVYAATDAWVSREI 189
>gi|46579495|ref|YP_010303.1| 3' exoribonuclease [Desulfovibrio vulgaris str. Hildenborough]
gi|120602955|ref|YP_967355.1| 3'-5' exonuclease [Desulfovibrio vulgaris DP4]
gi|46448909|gb|AAS95562.1| 3'- 5' exonuclease domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563184|gb|ABM28928.1| 3'-5' exonuclease [Desulfovibrio vulgaris DP4]
Length = 202
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 39/200 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
++ LV + E E L S++G D E +P R + N P SL+QLAC
Sbjct: 29 EVRLVRTEE--ELADALDVLRSDSVLGFDTETRPTFRKGKVNLP--SLVQLAC------- 77
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
A VV+L+ L+ +PL E+L +L P I+K G + D+ L + +
Sbjct: 78 -------ADVVYLIQLNWVPLG---EMLADLLSDPAIIKTGVAVRDDIRDLQKLYAFRDG 127
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ + ++ R L ET L N+ L I +SK QCS+WSNR
Sbjct: 128 GV-----------------VDLGEVARDLGLETHGLRNLAANFLGIRISKGAQCSNWSNR 170
Query: 189 PLTEEQKNYAAIDAHCLIEI 208
L +Q YAA DA EI
Sbjct: 171 ELGPQQVVYAATDAWVSREI 190
>gi|449435970|ref|XP_004135767.1| PREDICTED: uncharacterized protein LOC101205010 [Cucumis sativus]
Length = 580
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 33/184 (17%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI- 87
+ + +VG+D EWKP +VS++Q+A + + F+ DL +
Sbjct: 375 IEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASEK--------------MAFIFDLIKLY 420
Query: 88 -PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
+P I + L + S ILKLG+ F D+ LS ++ S C F E LDI +I+
Sbjct: 421 DDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKC---FKHYEMLLDIQNIF 477
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
+H + L+ + +++L L+K + SDW RPLT Q YAA+DA L
Sbjct: 478 DH-------------SGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVL 524
Query: 206 IEIF 209
+ IF
Sbjct: 525 VHIF 528
>gi|449520229|ref|XP_004167136.1| PREDICTED: uncharacterized LOC101205010 [Cucumis sativus]
Length = 580
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 33/184 (17%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI- 87
+ + +VG+D EWKP +VS++Q+A + + F+ DL +
Sbjct: 375 IEECKVVGIDCEWKPNYIKGKKPNKVSIMQIASEK--------------MAFIFDLIKLY 420
Query: 88 -PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
+P I + L + S ILKLG+ F D+ LS ++ S C F E LDI +I+
Sbjct: 421 DDVPDILDNCLTRILQSSSILKLGYNFLCDVKQLSHSYESLKC---FKHYEMLLDIQNIF 477
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
+H + L+ + +++L L+K + SDW RPLT Q YAA+DA L
Sbjct: 478 DH-------------SGGLSGLAQKVLGAGLNKTRRNSDWEQRPLTVNQLEYAALDAVVL 524
Query: 206 IEIF 209
+ IF
Sbjct: 525 VHIF 528
>gi|308802033|ref|XP_003078330.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
gi|116056782|emb|CAL53071.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
Length = 1013
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 34/184 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P N P V+LLQ+A + VFL+DL + S E
Sbjct: 407 IGLDAEWRPG----DNTP-VALLQIATR--------------GEVFLVDLLATAPRSAGE 447
Query: 95 --------LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
LL+ + S D+ KLGF F D+ + +++ + +R + +D+ +
Sbjct: 448 ALNDATDELLQAVLWSEDVYKLGFSFAYDIKRMKASYSH--LKVWSERSKNLVDVKQLAF 505
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
++ + LA + +++ +L K+ QCSDW RPLTE Q YAA D H L
Sbjct: 506 ASSPSKMSLRC-----GLAVLTRQVTGFTLDKKEQCSDWGKRPLTEGQIAYAAADGHSLC 560
Query: 207 EIFN 210
IF+
Sbjct: 561 LIFD 564
>gi|356535024|ref|XP_003536049.1| PREDICTED: uncharacterized protein LOC100788595 [Glycine max]
Length = 566
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 32/187 (17%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
R + ++GLD EWKP S +VS++Q+A + F+ DL
Sbjct: 370 TRHIEGFKVIGLDCEWKPNYIKGSKPNKVSIMQIASEDSA--------------FIFDLI 415
Query: 86 SI--PLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+ +P I + L + +SP ILKLG+ F+ D L+ ++ C F E LDI
Sbjct: 416 KLHKEVPDILDNCLSRILLSPRILKLGYNFQCDAKQLAYSYEELRC---FKNYEMLLDIQ 472
Query: 143 SIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+++ K P+ LA + +++L SL+K + S+W RPLT Q YAA+DA
Sbjct: 473 NVF----------KEPR--GGLAGLTEKILGASLNKTRRNSNWEQRPLTPHQLEYAALDA 520
Query: 203 HCLIEIF 209
L+ IF
Sbjct: 521 VVLVHIF 527
>gi|348677929|gb|EGZ17746.1| hypothetical protein PHYSODRAFT_560259 [Phytophthora sojae]
Length = 1489
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P S + + S+LQ+AC VF+ D + L + E
Sbjct: 900 LGLDAEWRPD-SRAAVPSKCSILQVACD--------------DYVFIFDFVEMALGDLEE 944
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
L + LF S I K+GF D+ L +F C FD LD + + L
Sbjct: 945 LFEHLFASERIAKIGFAIDGDIKRLRWSFPDVKC---FDTFVNVLDFS--FETL------ 993
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
E + K+ L LSK Q SDW RPLT +Q YAA+DA+CL+ + Q
Sbjct: 994 -----EATTHLTYIKQALGYPLSKLQQKSDWERRPLTPQQVAYAALDAYCLL----MLQD 1044
Query: 215 KVAQK 219
VA K
Sbjct: 1045 AVANK 1049
>gi|441623909|ref|XP_003279887.2| PREDICTED: probable exonuclease mut-7 homolog [Nomascus leucogenys]
Length = 788
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 43/230 (18%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T A AL Q +VG+D EW P PR SLL
Sbjct: 329 DQYYQLPIPRENVHLLASWE--DLTRHAGALLQRHQVVGVDLEWTPVFV-AGGRPRPSLL 385
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 386 QVAVE--------------GHVFLLDILALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 431
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL--------GRKLPKETK 162
DL L ++ + VE + + SI L H+Q+ G + +
Sbjct: 432 GMVGDLQKLGTSCPT------LAHVEKQI-LGSIDLLLVHRQMRVANMPAPGMDRARGLR 484
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
L+ + +++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 485 GLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQLIYAAADAYCLLEVHQAL 534
>gi|357441845|ref|XP_003591200.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
gi|355480248|gb|AES61451.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
Length = 519
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+ + ++GLD EWKP S +VS++Q+A E A ++ L+ L
Sbjct: 335 IEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIA-----------SEKKAFILDLIKLHREV 383
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ L + +SP ILKLG+ F+ D+ L+ ++ C F + + LDI ++
Sbjct: 384 PERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELEC---FKKYKRLLDIQKVF--- 437
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
K P+ LA + +++L L+K + SDW RPLT Q YAA+DA L+ I
Sbjct: 438 -------KDPR--GGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHI 488
Query: 209 F 209
F
Sbjct: 489 F 489
>gi|332030729|gb|EGI70405.1| Putative exonuclease mut-7-like protein [Acromyrmex echinatior]
Length = 955
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 56/211 (26%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L ++VG+D EWKP S + P ++L+Q+A + V++LD+
Sbjct: 355 LDNGLRDVNIVGIDLEWKP--SFGTKQPELALMQVATEDN--------------VYILDV 398
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLS------STFCSQGCDIGFDRV 135
++I L +W EL LF + DI+K+GF QD+ + S+ + G
Sbjct: 399 TTIGDKLLELWNELGLVLFGNKDIIKIGFGIAQDMTVIRNSLPALSSIKTHG-------- 450
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKE--------------TKSLANICKELLDISLSKELQ 181
+ YLD+ ++ RKL +E +SL+ + + L K Q
Sbjct: 451 QGYLDLMLLW---------RKLVEEYNFVFPYKGDPNFTNRSLSKLVELCFGQRLDKSDQ 501
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
S+W RPL E Q YAA+DA+CL+EI+N+
Sbjct: 502 FSNWELRPLRESQIIYAALDAYCLLEIYNVL 532
>gi|388502398|gb|AFK39265.1| unknown [Medicago truncatula]
Length = 553
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+ + ++GLD EWKP S +VS++Q+A E A ++ L+ L
Sbjct: 369 IEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIA-----------SEKKAFILDLIKLHREV 417
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ L + +SP ILKLG+ F+ D+ L+ ++ C F + + LDI ++
Sbjct: 418 PERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELEC---FKKYKRLLDIQKVF--- 471
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
K P+ LA + +++L L+K + SDW RPLT Q YAA+DA L+ I
Sbjct: 472 -------KDPR--GGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHI 522
Query: 209 F 209
F
Sbjct: 523 F 523
>gi|357441841|ref|XP_003591198.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
gi|355480246|gb|AES61449.1| hypothetical protein MTR_1g083820 [Medicago truncatula]
Length = 553
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+ + ++GLD EWKP S +VS++Q+A E A ++ L+ L
Sbjct: 369 IEDAKVIGLDCEWKPNYVKGSKPNKVSIMQIA-----------SEKKAFILDLIKLHREV 417
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ L + +SP ILKLG+ F+ D+ L+ ++ C F + + LDI ++
Sbjct: 418 PERLDSCLTRILLSPGILKLGYNFQCDIKQLAHSYEELEC---FKKYKRLLDIQKVF--- 471
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
K P+ LA + +++L L+K + SDW RPLT Q YAA+DA L+ I
Sbjct: 472 -------KDPR--GGLAKLAEKILGAGLNKTRRNSDWEQRPLTPNQLEYAALDAVVLVHI 522
Query: 209 F 209
F
Sbjct: 523 F 523
>gi|194226096|ref|XP_001492084.2| PREDICTED: probable exonuclease mut-7 homolog [Equus caballus]
Length = 870
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ +H + S E + L Q LVG+D EW+P P+VSL+Q
Sbjct: 371 DDYYQLPVARENVHFLASWE--DLARHEEELLQVGLVGVDLEWRPSFG-TGGRPQVSLMQ 427
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPS--IWELLKELFVSPDILKLGFKFKQDL 116
+A + VFLLDL + S +L+ L P I KLG+ DL
Sbjct: 428 VAVE--------------GHVFLLDLLVLSQTSQAFSQLVLRLLSDPSITKLGYGMAGDL 473
Query: 117 IYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-------KETKSLANICK 169
L ++ C VE L + +H + +P K + L+ + +
Sbjct: 474 RSLGAS-CP-----ALAHVEKQLRGSLDLQQVHRQMRVVDMPAPSVDGTKGPRGLSLLVQ 527
Query: 170 ELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
++L L K Q S+W RPL+E Q YAA DA+CL+E++ +
Sbjct: 528 QVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVL 570
>gi|195051841|ref|XP_001993181.1| GH13217 [Drosophila grimshawi]
gi|193900240|gb|EDV99106.1| GH13217 [Drosophila grimshawi]
Length = 632
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ +P F H+ + L + ++ +DAEW Q+ ++ LLQ+A
Sbjct: 416 LIIVDTAPIFEHMLQHLQREQIIYMDAEWMQNVCVQN---QLCLLQIATTHN-------- 464
Query: 73 ESNASVVFLLD-LSSIPL-PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L++ L W L +F + +ILK+GF DL L + Q
Sbjct: 465 ------VYLIDCLANQALHEDHWRALGATVFNNVNILKVGFSMLNDLSVLQRSLPLQ--- 515
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 516 LRLHMPHHYLDLRTVWLELKKQRHGIELPFGNLNRAGDALTDLTMLCLGKKLNKANQCSN 575
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFN 210
W+NRPL EQ YAAIDA CL+ I++
Sbjct: 576 WANRPLRREQILYAAIDARCLLHIYD 601
>gi|255542852|ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223548450|gb|EEF49941.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 570
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 34/181 (18%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL----SSIPL 89
+VGLD EWKP S +VS++Q+A SD+ +VF+ DL +P
Sbjct: 373 VVGLDCEWKPNFEKGSKPNKVSIMQIA----------SDK----MVFIFDLIKLFEDVP- 417
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
++ L + SP ILKLG+ F+ D L+ ++ C F E LDI ++
Sbjct: 418 DTLDNCLTRILQSPRILKLGYNFQCDTKQLAQSYGELKC---FKHYEMLLDIQNVCRE-- 472
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
P+ L+ + K+LL L+K + S+W RPL++ Q YAA+DA LI IF
Sbjct: 473 --------PR--GGLSGLAKKLLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAVVLIHIF 522
Query: 210 N 210
+
Sbjct: 523 H 523
>gi|359070742|ref|XP_002691738.2| PREDICTED: probable exonuclease mut-7 homolog [Bos taurus]
Length = 1026
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVSL+Q+A + VFLLDL +
Sbjct: 446 LQPGQVVGVDLEWRPSFG-TGGRPRVSLMQVAVE--------------GRVFLLDLPRLS 490
Query: 89 LPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
P+ +L+ +L P I KLG+ DL L +++ + +++ LD+
Sbjct: 491 SPAGGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYPA--LAQAGQKLQGGLDL 548
Query: 142 TSIYNHLHHKQLGRKLPK-----ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + + R P + L+ + +++L L K Q S+W RPL E Q
Sbjct: 549 LQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLV 606
Query: 197 YAAIDAHCLIEIF 209
YAA DA+CL+E++
Sbjct: 607 YAAADAYCLLEVY 619
>gi|157110292|ref|XP_001651037.1| hypothetical protein AaeL_AAEL005527 [Aedes aegypti]
gi|122068562|sp|Q179T2.1|MUT7_AEDAE RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
homolog
gi|108878761|gb|EAT42986.1| AAEL005527-PA [Aedes aegypti]
Length = 719
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
+HLV S + +F + L + S++ D+EWKP + VSL+QLA
Sbjct: 437 VHLVDSKD--KFYAMLSDLCRQSMIAFDSEWKPTFGGAN---EVSLIQLATWDD------ 485
Query: 71 SDESNASVVFLLDLSSIPL-PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V+++D+ L P W L K +F D+LKL F D+ S
Sbjct: 486 --------VYMIDVMVSQLEPLDWAALAKNVFNRDDVLKLSFAPSTDISMFQKALPSFNV 537
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKE---TKSLANICKELLDISLSKELQCSDW 185
LD+ ++ H+ R E ++LAN+ + L L K Q S+W
Sbjct: 538 MYSSQSTSAILDLQLLWRHVERFDSFRFPYHEESVNQNLANLVRLCLGKKLDKSNQFSNW 597
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
+ RPL +EQ YAA+DA CL+EI++ + ++
Sbjct: 598 AQRPLRKEQLRYAALDAFCLLEIYDAIEKQLTH 630
>gi|307176637|gb|EFN66105.1| Probable exonuclease mut-7-like protein [Camponotus floridanus]
Length = 1053
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 52/209 (24%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L ++VG+D EWKP S + P ++L+Q+A + V++LD+
Sbjct: 393 LDNGLKNVTIVGIDLEWKP--SFGTKQPELALIQIATEDN--------------VYILDV 436
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+++ LP +W EL LF + +I+K+GF D+ + ++ + +
Sbjct: 437 TTLGNELPELWVELGLTLFGNKNIVKIGFGIAHDITVIRNSIPA---------------L 481
Query: 142 TSIYNH----LHHKQLGRKLPKE--------------TKSLANICKELLDISLSKELQCS 183
+SI NH L L RKL ++ +KSL+ + + L K Q S
Sbjct: 482 SSIKNHGQGYLDLMILWRKLTEDYNFIFPYKGDPNFTSKSLSKLVELCFGQRLDKSDQFS 541
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+W RPL E Q YAA+DA+CL+EI+ +
Sbjct: 542 NWELRPLRESQIIYAALDAYCLLEIYKVL 570
>gi|194759149|ref|XP_001961812.1| GF15154 [Drosophila ananassae]
gi|190615509|gb|EDV31033.1| GF15154 [Drosophila ananassae]
Length = 627
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ + +F + L + + LD+EW +S ++ LLQ+A +D
Sbjct: 412 LIIIDTAVKFDEMLNDLQRQQTIYLDSEWLQNICGES---QLCLLQIA----------TD 458
Query: 73 ESNASVVFLLDL---SSIPLPSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+ V+L+D SI P W LL ++F + +ILK+GF DL L + Q
Sbjct: 459 Q----FVYLIDCLARESIQ-PEQWRLLGSKVFNNVNILKVGFSMACDLSVLQRSLPLQ-- 511
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCS 183
+ YLD+ S++ L + G +LP + +L+++ L L+K QCS
Sbjct: 512 -LRLHTPHHYLDLRSLWLQLKKQHTGVELPFGNINRAGGALSDLSFLCLGKKLNKSNQCS 570
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
+W+NRPL EQ YAAIDA CL IF Q ++
Sbjct: 571 NWTNRPLRHEQIIYAAIDARCLFLIFKTLQARI 603
>gi|326671072|ref|XP_003199355.1| PREDICTED: probable exonuclease mut-7 homolog [Danio rerio]
Length = 847
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
Query: 5 YRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLAC 61
Y+ PL +H V + E + A L S+VG+D EW+ S+ RV+L+QLA
Sbjct: 431 YQLPLPRENVHFVETLEEVDKCREA-VLKSGSVVGMDMEWRAGFGTVSS-QRVALIQLAV 488
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPLP---SIWELLKELFVSPDILKLGFKFKQDLIY 118
Q VFLLDL + + + + ++ L ILKLG+ DL
Sbjct: 489 Q--------------DQVFLLDLCAHAISHHSTTVDFIRALLSDKKILKLGYGMSGDLRS 534
Query: 119 LSSTFCSQGCDIGFD--RVEPYLDITSIYNHLHHKQLGRKLPKET--------KSLANIC 168
L ST+ D+ + ++E LD+ I+ L LG K + K L+ +
Sbjct: 535 LVSTWP----DLREEPMKMEGVLDLLLIHQELQRCWLGNKGCRSVEVSEGPAEKGLSLLV 590
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L L+K Q S+W RPL Q YAA DA+CL++I+ I
Sbjct: 591 QQVLGKPLNKSEQLSNWERRPLRTSQLRYAAADAYCLLDIYLIL 634
>gi|440894519|gb|ELR46950.1| Putative exonuclease mut-7-like protein, partial [Bos grunniens
mutus]
Length = 855
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVSL+Q+A + VFLLDL +
Sbjct: 384 LQPGQVVGVDLEWRPSFG-TGGRPRVSLMQVAVE--------------GRVFLLDLPRLS 428
Query: 89 LPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
P+ +L+ +L P I KLG+ DL L +++ + +++ LD+
Sbjct: 429 SPAGGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYPA--LAQAGQKLQGGLDL 486
Query: 142 TSIYNHLHHKQLGRKLPK-----ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + + R P + L+ + +++L L K Q S+W RPL E Q
Sbjct: 487 LQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLV 544
Query: 197 YAAIDAHCLIEIF 209
YAA DA+CL+E++
Sbjct: 545 YAAADAYCLLEVY 557
>gi|397492286|ref|XP_003817058.1| PREDICTED: probable exonuclease mut-7 homolog [Pan paniscus]
Length = 878
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ IHL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRESIHLLASWE--DLTRHEGALLQCHQVVGVDLEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL--------GRKLPKETK 162
+DL L T C VE + + I L H+Q+ G +E +
Sbjct: 464 GMVEDLQKLG-TSCP-----ALAHVEKQI-LGGIDLLLVHRQMRVASVPAPGVDRARELR 516
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
L+ + +++L +L K Q S+W RPL +EQ YAA DA+CL+E+
Sbjct: 517 GLSLLVQQVLGTALDKTQQLSNWDRRPLCQEQVIYAAADAYCLLEVHQAL 566
>gi|358422031|ref|XP_001788105.2| PREDICTED: probable exonuclease mut-7 homolog [Bos taurus]
Length = 952
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 31/193 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVSL+Q+A + VFLLDL +
Sbjct: 446 LQPGQVVGVDLEWRPSFG-TGGRPRVSLMQVAVE--------------GRVFLLDLPRLS 490
Query: 89 LPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
P+ +L+ +L P I KLG+ DL L +++ + +++ LD+
Sbjct: 491 SPAGGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYPA--LAQAGQKLQGGLDL 548
Query: 142 TSIYNHLHHKQLGRKLPK-----ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + + R P + L+ + +++L L K Q S+W RPL E Q
Sbjct: 549 LQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLV 606
Query: 197 YAAIDAHCLIEIF 209
YAA DA+CL+E++
Sbjct: 607 YAAADAYCLLEVY 619
>gi|384249267|gb|EIE22749.1| hypothetical protein COCSUDRAFT_47679 [Coccomyxa subellipsoidea
C-169]
Length = 400
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 37 LDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELL 96
LDAEW+P S P SL+Q A + + S + L+D ++P + LL
Sbjct: 46 LDAEWEPYTSK----PCASLVQAAVR--------TRGSAEQYLLLMDFEAVPKLDLRRLL 93
Query: 97 KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRK 156
+++F +LK+G+ DL +++ +G V+P++DI S++ L+ K
Sbjct: 94 QKIFRDRAMLKVGYGLLMDLRAIATGLGGEGTGC-VSVVDPFIDIGSLHRALYSKGTPGI 152
Query: 157 LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
E K LA + + L L K LQCS WS RPL +Q
Sbjct: 153 AKVEGKGLAGLVEVQLGQRLDKRLQCSSWSQRPLQPDQ 190
>gi|115463391|ref|NP_001055295.1| Os05g0357100 [Oryza sativa Japonica Group]
gi|55168078|gb|AAV43946.1| unknown protein [Oryza sativa Japonica Group]
gi|113578846|dbj|BAF17209.1| Os05g0357100 [Oryza sativa Japonica Group]
gi|215716995|dbj|BAG95358.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196622|gb|EEC79049.1| hypothetical protein OsI_19612 [Oryza sativa Indica Group]
gi|222631262|gb|EEE63394.1| hypothetical protein OsJ_18206 [Oryza sativa Japonica Group]
Length = 580
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 32/180 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL--PS 91
++G+D EWKP S +VS++Q+A SD+ F+ DL + P
Sbjct: 395 IIGVDCEWKPNFEKGSKPNKVSIIQIA----------SDKK----AFIFDLIKLYEDDPK 440
Query: 92 IWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
+ + + + S +ILKLG+ + DL LS ++ C F E LDI ++
Sbjct: 441 VLDSCFRRIMCSSNILKLGYNLQCDLHQLSQSYGELKC---FQSYEMLLDIQKLF----- 492
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
T L+ + K++L L+K + S+W RPLT+ QK YAA+DA L+ IF+
Sbjct: 493 -------KGTTGGLSGLSKKILGAGLNKTRRNSNWEQRPLTQNQKEYAALDAVVLVHIFH 545
>gi|449283146|gb|EMC89845.1| putative exonuclease mut-7 like protein [Columba livia]
Length = 730
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 97/215 (45%), Gaps = 37/215 (17%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH + + E + + L +VG+D EWKP PRVSLLQLA
Sbjct: 339 IHFLQTWEETQRC-WEKVLRPGQVVGIDMEWKPSFGMVGK-PRVSLLQLALH-------- 388
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKE--------LFVSPDILKLGFKFKQDLIYLSST 122
DE VFLLDL + ++ E KE L+ I KLG+ DL L++T
Sbjct: 389 -DE-----VFLLDLPRLLEQAVMEAEKEKLPHFIQRLYSDAAITKLGYGMSGDLSSLAAT 442
Query: 123 FCS--------QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDI 174
+ + QG + ++ +D+ S R + K L+ + + +L
Sbjct: 443 WSALKDTDKQAQGV-VDLLTIDKQVDVVSP----EQSDEDRGCRQPEKGLSLLVQHVLGK 497
Query: 175 SLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL EEQ YAA DA+CL+EI+
Sbjct: 498 PLDKTEQLSNWEKRPLREEQILYAASDAYCLLEIY 532
>gi|326508692|dbj|BAJ95868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 562
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 28/178 (15%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G+D EWKP S +V+++Q+A + A + L+ L ++
Sbjct: 377 IIGVDCEWKPNYEKGSRPNKVAIIQIA-----------SDKKAFIFDLIKLYEDDPKALD 425
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+ + S +ILKLG+ + DL L+ ++ C F E LDI
Sbjct: 426 CCFRRIMCSSNILKLGYNLQCDLHQLTQSYGELLC---FQSYEMLLDI------------ 470
Query: 154 GRKLPKETKS-LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+KL KET L+ + K++L L+K + SDW RPL++ QK YAA+DA L+ IF+
Sbjct: 471 -QKLFKETTGGLSGLSKKILGAGLNKTRRNSDWEQRPLSQNQKEYAALDAAVLVHIFH 527
>gi|328776161|ref|XP_391887.3| PREDICTED: probable exonuclease mut-7 homolog [Apis mellifera]
Length = 954
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 32/202 (15%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L + L S+VG+D+EWKP + ++L+Q+A + V+++D+
Sbjct: 406 LDKGLDGVSIVGIDSEWKP--CFGTKQTELALIQIATKDN--------------VYIIDV 449
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYL 139
+++ +W +L LF + +ILKLGF QD+ + S+ S+ G + YL
Sbjct: 450 TTMGNKFTELWAKLALVLFENKNILKLGFGIAQDMTVIRSSLPALSKIKIYG----QGYL 505
Query: 140 DITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLTEE 193
DI +++ L + P E+ K+L+ + + L L+K Q S+W RPL E
Sbjct: 506 DIVNLWKKLV-EDYKFVFPHESDDQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRES 564
Query: 194 QKNYAAIDAHCLIEIFNIFQVK 215
Q YAA+DA+CL+EI+ +++
Sbjct: 565 QIIYAALDAYCLLEIYATLEIQ 586
>gi|195114732|ref|XP_002001921.1| GI14516 [Drosophila mojavensis]
gi|193912496|gb|EDW11363.1| GI14516 [Drosophila mojavensis]
Length = 625
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 30/206 (14%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ P F + + L + ++ LD+EW Q+ ++ LLQ+A
Sbjct: 409 LIIVDSFPIFNRMLKHLQREHIIYLDSEWMQNVCAQN---QLCLLQIATTCN-------- 457
Query: 73 ESNASVVFLLD-LSSIPL--PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V+L+D L+S P W L +F +P+ILK+GF DL L + Q
Sbjct: 458 ------VYLIDCLASRPALEEQHWRALGATVFNNPNILKVGFSMLNDLSVLQRSLPLQ-- 509
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCS 183
+ YLD+ +++ L +Q G +LP + +L ++ L L+K QCS
Sbjct: 510 -LRLHMPHHYLDLRNVWLELKKRQ-GVELPFGNVNRAGDALTDLSMLCLGKKLNKTNQCS 567
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIF 209
+W+NRPL EQ YAAIDA CL+ I+
Sbjct: 568 NWANRPLRREQILYAAIDARCLLLIY 593
>gi|449477771|ref|XP_002190738.2| PREDICTED: probable exonuclease mut-7 homolog [Taeniopygia guttata]
Length = 837
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 97/207 (46%), Gaps = 43/207 (20%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L +VG+D EWKP PRV+LLQLA + DE VFLLDL
Sbjct: 381 KVLQPGQVVGVDMEWKPSFGMVGK-PRVALLQLALK---------DE-----VFLLDLPQ 425
Query: 87 IPLPSIWELLKE--------LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+ + E KE L+ I KLG+ DL L++T CS D +++
Sbjct: 426 LLEQAETEGEKEKLPHFIQMLYSDATITKLGYGMSGDLSSLAAT-CSTLKDTE-KQMQGV 483
Query: 139 LDITSIYNHLH----------------HKQLGRKLPKETKSLANICKELLDISLSKELQC 182
+D+ ++ L H+Q G + P+ K L+ + + +L L K Q
Sbjct: 484 VDLLAVDKQLQWGKDSRKVDGLSPEHSHEQRGVRQPE--KGLSLLVQHVLGKPLDKTEQL 541
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIF 209
S+W RPL EEQ YAA DA+CL+EI+
Sbjct: 542 SNWEKRPLREEQILYAASDAYCLLEIY 568
>gi|195155440|ref|XP_002018612.1| GL25861 [Drosophila persimilis]
gi|194114765|gb|EDW36808.1| GL25861 [Drosophila persimilis]
Length = 625
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+T + +F + L + ++ +D+EW +S ++ LLQ+A
Sbjct: 408 LITVDTATQFDLMLGHLQREHIIYMDSEWVQNVCGES---QLCLLQIATV---------- 454
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
N ++ L SI L ++F + +ILK+GF DL L + Q +
Sbjct: 455 -RNVYLIDCLARQSITADHWRALGADVFNNMNILKVGFSMYSDLTVLQRSLPLQ---LRL 510
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSDWSN 187
YLD+ +++ L ++ +LP + +L+++ L L+K QCS+W+N
Sbjct: 511 QLSHHYLDLRTLWLELKKQRYAIRLPFGNVNRAGDALSDLSLVCLGKKLNKSNQCSNWAN 570
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
RPL EQ YAAIDA CL+ I+N +V
Sbjct: 571 RPLRREQILYAAIDARCLMLIYNTLLNRV 599
>gi|268573488|ref|XP_002641721.1| C. briggsae CBR-MUT-7 protein [Caenorhabditis briggsae]
Length = 896
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E L+R +S VG D+EWKP +N +++++QL + +V
Sbjct: 416 EIESLSREPEKSVYVGFDSEWKPSNLITANSSKIAIIQLFFK-----------DKVLLVD 464
Query: 81 LLDLSSIPLPSI-WE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
++L +P + WE K LF +P + +GF + DL + +G + ++++
Sbjct: 465 CVELEKEKVPDLLWERFAKGLFETPKLKLIGFDMRNDLEAIIELPALKG-RLNLEQIKNA 523
Query: 139 LDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
D+ + ++ + +LPK+T LA++ + LL L K QCS+W RPL ++Q Y
Sbjct: 524 YDLKRLAENICDIDMDILELPKKTFKLADLTQYLLGQVLDKTEQCSNWQCRPLRKKQILY 583
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNL 234
AA+DA ++ F K ++ S + +SN+
Sbjct: 584 AALDAVVVVNTFKKILEKTQERNEDVDVPSVVKNSNV 620
>gi|194878428|ref|XP_001974061.1| GG21519 [Drosophila erecta]
gi|190657248|gb|EDV54461.1| GG21519 [Drosophila erecta]
Length = 625
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW ++ ++ +LQ+A
Sbjct: 410 LIIVDKAEQFDRMLYHLQQEYVIYLDSEWMQSVCGEN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 455 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ S++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRSLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAA+DA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAMDARCLLLIYNTLIARVS 602
>gi|260802943|ref|XP_002596351.1| hypothetical protein BRAFLDRAFT_215559 [Branchiostoma floridae]
gi|229281606|gb|EEN52363.1| hypothetical protein BRAFLDRAFT_215559 [Branchiostoma floridae]
Length = 503
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 47/241 (19%)
Query: 5 YRKPLKIHL--VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQ 62
Y+ PL + V TE + R L ++VGLDAEW+P + RVS++QLA +
Sbjct: 5 YQMPLHMEFIDVIGTEKGLSSCAQRLLQPGTMVGLDAEWRPSFGNTLITQRVSIVQLAIK 64
Query: 63 PGPRFNPESDESNASVVFLLDLSSI----PLPSIWELLKELFVSPDILKLGFKFKQDLIY 118
V++LD+ ++ + + + L S D++ +G+ D
Sbjct: 65 --------------DKVYILDMIALVQNTEMGKLQDFFSSLLASQDVIIIGYGIDGDFQM 110
Query: 119 LSST--FCSQGCDIGFDRVEPYLDITSIYNHLHHKQ----------------LGRKLPK- 159
L + F + + + +D++ H+H G K
Sbjct: 111 LGRSYPFLREA----LSKRKSVIDLS----HVHKANPALLTFDAGETTDDDFTGEASAKS 162
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
+ L+ + ++ L + L+K Q SDW RPL + Q YA++DA+CL+E++++ +V
Sbjct: 163 DAHGLSQLVQQCLGLPLAKTEQLSDWERRPLRKAQILYASLDAYCLLEVYDVLTKRVKDA 222
Query: 220 G 220
G
Sbjct: 223 G 223
>gi|145345029|ref|XP_001417026.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577252|gb|ABO95319.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 86/184 (46%), Gaps = 34/184 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+GLDAEW+P N P V+LLQ+A + VFL+DL + S E
Sbjct: 102 LGLDAEWRPG----DNTP-VALLQIATR--------------EEVFLIDLLATAPRSAGE 142
Query: 95 --------LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
LLK + S + KLGF F D+ + +++ + ++ +D+
Sbjct: 143 SLNVATDELLKAVLWSEGVYKLGFSFAYDVKRMKASYSH--LSVWEEKSRNLVDV----K 196
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
L + + K P LA + ++++ L K+ QCSDW RPLTE Q YAA D + L
Sbjct: 197 QLAYAAMPNKTPLRC-GLAVLTRQVIGCLLDKKEQCSDWGKRPLTESQMAYAAADGYSLC 255
Query: 207 EIFN 210
IF+
Sbjct: 256 LIFD 259
>gi|119608788|gb|EAW88382.1| hypothetical protein FLJ20433, isoform CRA_b [Homo sapiens]
Length = 390
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 41 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 97
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 98 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 143
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L ++ C + ++ +D+ ++ + + +E + L+ +
Sbjct: 144 GMVGDLQKLGTS-CPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 201
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 202 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 246
>gi|21428342|gb|AAM49831.1| GM01690p [Drosophila melanogaster]
Length = 625
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ EF + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVNKADEFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 455 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAIDARCLMLIYNTLIERVS 602
>gi|380016821|ref|XP_003692371.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Apis florea]
Length = 938
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 32/202 (15%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L + L S+VG+D+EWKP + ++L+Q+A + V+++D+
Sbjct: 390 LDKGLDGISIVGIDSEWKP--CFGTKQTELALIQIATKDN--------------VYIIDV 433
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYL 139
+++ +W +L LF + ILKLGF QD+ + S+ S+ G + YL
Sbjct: 434 TTMGNKFTELWAKLALVLFENKSILKLGFGIAQDMTVIRSSLPALSKIKIYG----QGYL 489
Query: 140 DITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLTEE 193
DI +++ L + P E+ K+L+ + + L L+K Q S+W RPL E
Sbjct: 490 DIVNLWKKLV-EDYKFVFPHESDDQFTKKNLSKLVELCLGQKLNKSDQFSNWEQRPLRES 548
Query: 194 QKNYAAIDAHCLIEIFNIFQVK 215
Q YAA+DA+CL+EI+ +++
Sbjct: 549 QIIYAALDAYCLLEIYATLEIQ 570
>gi|16549645|dbj|BAB70838.1| unnamed protein product [Homo sapiens]
Length = 599
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 84 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 140
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 141 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 186
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 187 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 244
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 245 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 289
>gi|20129683|ref|NP_610094.1| nibbler [Drosophila melanogaster]
gi|75027007|sp|Q9VIF1.1|MUT7_DROME RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
homolog
gi|7298759|gb|AAF53970.1| nibbler [Drosophila melanogaster]
gi|356461056|gb|AET07634.1| RE72821p1 [Drosophila melanogaster]
Length = 625
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ EF + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVNKADEFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 455 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAIDARCLMLIYNTLIERVS 602
>gi|301781518|ref|XP_002926188.1| PREDICTED: LOW QUALITY PROTEIN: probable exonuclease mut-7 homolog
[Ailuropoda melanoleuca]
Length = 849
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH + S E H L +VG+D EW+P P+ S++Q+A +
Sbjct: 381 IHFLASWEDLA-RHEDELLQPGQVVGVDLEWRPSFG-TGGRPQASIMQVAVE-------- 430
Query: 71 SDESNASVVFLLDLSSIPLPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
VFLLD+ + P+ L+ +L P I KLG+ DL L ++
Sbjct: 431 ------GRVFLLDVRVLSRPAGGQVSQAFSRLVSQLLSDPSITKLGYGMAGDLRSLGAS- 483
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKETKSLANICKELLDISLSKEL 180
C + ++ LD+ ++ + LGR + + L+ + +++L L K
Sbjct: 484 CPALAHVE-KQLRGSLDLLQVHRQMRAVDKPALGRGEARGLRGLSLLVQQVLGKPLDKSQ 542
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL+E Q YAA DA+CL+ ++
Sbjct: 543 QLSNWDRRPLSEGQLVYAAADAYCLLGVYQAL 574
>gi|145279204|ref|NP_060290.3| probable exonuclease mut-7 homolog [Homo sapiens]
gi|308153580|sp|Q8N9H8.3|MUT7_HUMAN RecName: Full=Probable exonuclease mut-7 homolog; AltName:
Full=Exonuclease 3'-5' domain-containing protein 3
Length = 876
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 464 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 521
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 522 VQQVLGTALDKTQQLSNWDRRPLCEEQVIYAAADAYCLLEVHQAL 566
>gi|225450638|ref|XP_002278277.1| PREDICTED: uncharacterized protein LOC100254615 [Vitis vinifera]
gi|296089752|emb|CBI39571.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 28/178 (15%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G+D EWKP S +VS+LQ+A E A + L+ L++ +P +
Sbjct: 377 VLGIDCEWKPNYEKGSKPNKVSILQVA-----------SEKRAFIFDLIKLAT-DVPDVL 424
Query: 94 E-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
+ L + S ILKLG+ F+ D+ L+ ++ C F E LDI +++
Sbjct: 425 DNCLISILHSSRILKLGYNFQCDVNQLTQSYGELKC---FKHFEMLLDIQNMF------- 474
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K P+ L+ + K++L L+K + S+W RPL++ Q YAA+DA L+ IF+
Sbjct: 475 ---KEPR--GGLSGLAKKVLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAAVLVHIFS 527
>gi|195580608|ref|XP_002080127.1| GD21649 [Drosophila simulans]
gi|194192136|gb|EDX05712.1| GD21649 [Drosophila simulans]
Length = 422
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 207 LIIVDKADQFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 251
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 252 --TGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 306
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 307 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 366
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 367 WANRPLRREQILYAAIDARCLLLIYNTLIARVS 399
>gi|22759879|dbj|BAC10986.1| HBE269 [Homo sapiens]
Length = 514
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 41 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 97
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 98 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 143
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L +
Sbjct: 144 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLTLL 201
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 202 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 246
>gi|21753501|dbj|BAC04356.1| unnamed protein product [Homo sapiens]
Length = 758
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 464 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 521
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 522 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 566
>gi|424513358|emb|CCO65980.1| predicted protein [Bathycoccus prasinos]
Length = 568
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 53/203 (26%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL---- 89
++GLD EWKP N P VSL Q+A + V+LLD+ + +
Sbjct: 145 VLGLDCEWKPG----DNTP-VSLFQVATREN--------------VYLLDVFAFMMDTGG 185
Query: 90 --------PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR------- 134
+ LK LF + ++KLGF F D+ L ++ + DR
Sbjct: 186 GGEEKGTAEAFDAFLKLLFENETLIKLGFGFDYDIKRLRMSYAPLEETLSMDRRKKGWID 245
Query: 135 ---VEPYLDITSIYN---HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ D S +N + H K++G LA + +++L +L K+ Q SDWS R
Sbjct: 246 VRELAYTADAVSSHNKRKYKHQKRVG---------LAALTRDILKCNLDKKCQVSDWSQR 296
Query: 189 PLTEEQKNYAAIDAHCLIEIFNI 211
PL++ Q+ YAA DA+ LI I ++
Sbjct: 297 PLSDPQQRYAATDAYSLISILDV 319
>gi|195352042|ref|XP_002042524.1| GM23271 [Drosophila sechellia]
gi|194124393|gb|EDW46436.1| GM23271 [Drosophila sechellia]
Length = 625
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVDKADQFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIATDHN-------- 458
Query: 73 ESNASVVFLLD-LSSIPLPS-IWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L S W LL +F + +I K+GF DL L + Q
Sbjct: 459 ------VYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ--- 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAAIDA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAIDARCLLLIYNTLIARVS 602
>gi|119608789|gb|EAW88383.1| hypothetical protein FLJ20433, isoform CRA_c [Homo sapiens]
Length = 876
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFV-AGGRPRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGF 110
Q+A + VFLLD+ ++ P + L+ +L P I KLG+
Sbjct: 418 QVAVE--------------GHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGY 463
Query: 111 KFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANI 167
DL L T C + ++ +D+ ++ + + +E + L+ +
Sbjct: 464 GMVGDLQKLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLL 521
Query: 168 CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 522 VQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 566
>gi|125987467|ref|XP_001357496.1| GA21642 [Drosophila pseudoobscura pseudoobscura]
gi|54645828|gb|EAL34566.1| GA21642 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+T + +F + L + ++ +D+EW +S ++ LLQ+A
Sbjct: 408 LITVDTATQFDLMLGHLQREHIIYMDSEWVQNVCGES---QLCLLQIATV---------- 454
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
N ++ L SI L ++F + +ILK+GF DL L + Q +
Sbjct: 455 -RNVYLIDCLARQSITADHWRALGADVFNNMNILKVGFSMYSDLTVLQRSLPLQ---LRL 510
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSDWSN 187
YLD+ +++ L ++ +LP + +L+++ L L+K QCS+W+N
Sbjct: 511 QLSHHYLDLRTLWLELKKQRYAIRLPFGNVNRAGDALSDLSLVCLGKKLNKSNQCSNWAN 570
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
RPL +Q YAAIDA CL+ I+N +V
Sbjct: 571 RPLRRDQILYAAIDARCLMLIYNTLLNRV 599
>gi|357134047|ref|XP_003568631.1| PREDICTED: probable exonuclease mut-7 homolog [Brachypodium
distachyon]
Length = 523
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 28/178 (15%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G+D EWKP S +VS++Q+A + A + L+ L ++
Sbjct: 338 IIGVDCEWKPNFEKGSRPNKVSIIQIA-----------SDKKAFIFDLIKLYEDDPKALD 386
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+ + S ++LKLG+ + DL LS ++ C F E LDI
Sbjct: 387 CCFRRIMCSSNLLKLGYNLQCDLHQLSQSYGELQC---FQSYEMLLDI------------ 431
Query: 154 GRKLPKETKS-LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+KL KET L+ + K++L L+K + S+W RPL++ QK YAA+DA L+ IF+
Sbjct: 432 -QKLFKETTGGLSGLSKKILGAGLNKTRRNSNWEKRPLSQNQKEYAALDAVVLVHIFH 488
>gi|345315003|ref|XP_001510635.2| PREDICTED: probable exonuclease mut-7 homolog, partial
[Ornithorhynchus anatinus]
Length = 846
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 49/212 (23%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EWKP PRVS+LQ+A + VFLLDL +
Sbjct: 464 LQAGQVVGIDMEWKPSFGAVRK-PRVSILQMAVE--------------GHVFLLDLLEVS 508
Query: 89 LP-----------SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS-QGCDIGFDRVE 136
P + ++EL++ P I KLG+ DL L+S+ + + D +V+
Sbjct: 509 KPEDRRGEEEENEAFAHFIQELYLDPSITKLGYGMLGDLRNLASSGPALRDLD---KQVQ 565
Query: 137 PYLDITSIYNHLHHKQLGRK-------------------LPKETKSLANICKELLDISLS 177
LD+ I L + RK + K L+ + + +L L
Sbjct: 566 GVLDLFQIDKQLQKRPGQRKKSSRPVDVLAQDPGPEARGAKRAEKGLSLLVQRVLGKPLD 625
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
K Q SDW RPL Q YAA DA+CL+E++
Sbjct: 626 KAEQLSDWERRPLRPAQILYAASDAYCLLEVY 657
>gi|281345331|gb|EFB20915.1| hypothetical protein PANDA_015792 [Ailuropoda melanoleuca]
Length = 723
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH + S E H L +VG+D EW+P P+ S++Q+A +
Sbjct: 342 IHFLASWEDLA-RHEDELLQPGQVVGVDLEWRPSFG-TGGRPQASIMQVAVE-------- 391
Query: 71 SDESNASVVFLLDLSSIPLPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
VFLLD+ + P+ L+ +L P I KLG+ DL L ++
Sbjct: 392 ------GRVFLLDVRVLSRPAGGQVSQAFSRLVSQLLSDPSITKLGYGMAGDLRSLGAS- 444
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLH---HKQLGRKLPKETKSLANICKELLDISLSKEL 180
C + ++ LD+ ++ + LGR + + L+ + +++L L K
Sbjct: 445 CPALAHVE-KQLRGSLDLLQVHRQMRAVDKPALGRGEARGLRGLSLLVQQVLGKPLDKSQ 503
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL+E Q YAA DA+CL+ ++
Sbjct: 504 QLSNWDRRPLSEGQLVYAAADAYCLLGVYQAL 535
>gi|384244778|gb|EIE18276.1| hypothetical protein COCSUDRAFT_68365 [Coccomyxa subellipsoidea
C-169]
Length = 840
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKP---QRSHQSNFPRVSLLQLACQPG 64
P +H V S A L +++++GLD EW+P R P VSLLQ+A +
Sbjct: 601 PDAVHFVDSAAG--LAQAASLLEEAAVLGLDCEWEPCTESRRGSDRHPPVSLLQIASRRH 658
Query: 65 PRFNPESDESNASVVFLLDLSSI-PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
V +LD++++ + + LL L S D++K G +D+ L+ +F
Sbjct: 659 --------------VVVLDMAALHQVAQLDALLTMLLCSNDVIKAGVGVVEDIGQLARSF 704
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQ 181
+ F L++ S ++ QLG + K L+ + + L L K +Q
Sbjct: 705 PAIQ---AFTNCRGLLELGSAFSQSEAAQLGMQAVQKKHGPGLSAMAEACLGRPLDKSMQ 761
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
S W+ RPL+E Q YAA+DA + I++
Sbjct: 762 MSRWNRRPLSERQLTYAALDALASVLIYD 790
>gi|383853373|ref|XP_003702197.1| PREDICTED: probable exonuclease mut-7 homolog [Megachile rotundata]
Length = 938
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 32/200 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L +VG+D+EWKP + ++L+Q+A + V++LD+
Sbjct: 400 LDTGLKSVFIVGIDSEWKP--CFGTKQTEIALIQIATETN--------------VYILDV 443
Query: 85 SSI--PLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYL 139
+++ P +W EL LF + +ILKLGF QD+ + + S+ G + Y+
Sbjct: 444 TTMGNKSPELWTELALTLFENKNILKLGFGIAQDMSVMRESLPALSKIKTHG----QGYV 499
Query: 140 DITSIYNHLHHKQLGRKLPKET------KSLANICKELLDISLSKELQCSDWSNRPLTEE 193
DI ++ L + P E+ +SL+ + + L L+K Q S+W RPL
Sbjct: 500 DIVHLWQILVN-DYKFVFPHESNDHCTKQSLSKLVELCLGQKLNKSDQFSNWEQRPLRSG 558
Query: 194 QKNYAAIDAHCLIEIFNIFQ 213
Q YAA+DA+CL+EI+ + +
Sbjct: 559 QITYAALDAYCLLEIYGVLE 578
>gi|301627207|ref|XP_002942768.1| PREDICTED: probable exonuclease mut-7 homolog [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 51/243 (20%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
KIH + S R L +VG+D EW+P VSL+QLA +
Sbjct: 269 KIHFLRSAGDLSVCR-ERVLKDGQVVGVDMEWRPMFGGLGK-QTVSLVQLALR------- 319
Query: 70 ESDESNASVVFLLDLSSIPLPS------------IWELLKELFVSPDILKLGFKFKQDLI 117
VFLLDL + P + +K+LF+ I KL + D+
Sbjct: 320 -------EEVFLLDLLQLNAPGAGANGTQRTREELIRFIKDLFLCAAITKLSYSVLGDIQ 372
Query: 118 YLSSTFCSQGCDIGFDR-VEPYLDITSIYNHLH---HKQLGRK----------------L 157
L +T +G ++ LD+ +++ L H+ G++
Sbjct: 373 NLEATDPEF---LGLEKQTRGILDLYTVHKQLQRVPHRPRGKREPVDVLADGPPSEDGLA 429
Query: 158 PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
P+ K L+ + +++L L K Q S+W RPL E+Q YAA DA+CL+E++++ + A
Sbjct: 430 PQSEKGLSLLVRDILGKPLDKTEQLSNWDKRPLREQQILYAAADAYCLLEVYDVLRQDPA 489
Query: 218 QKG 220
+ G
Sbjct: 490 RFG 492
>gi|391325253|ref|XP_003737153.1| PREDICTED: uncharacterized protein LOC100901281 [Metaseiulus
occidentalis]
Length = 452
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 44/210 (20%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
+H V + +S + L++ S++G D+EWKP + R++LLQ+A +
Sbjct: 237 VHFVDTVDS--YLDAVEYLNECSILGFDSEWKPNKGP----IRMALLQVASEDK------ 284
Query: 71 SDESNASVVFLLD---LSSIPLPSIWELLKELFVSPDILKLGFKFKQD--LI--YLSSTF 123
VFL D L I W LLK +F P+ LKLGF + D L+ ++
Sbjct: 285 --------VFLFDVMALHKILTFGDWTLLKSIFTDPNKLKLGFDTRDDSKLLEDFMGPLS 336
Query: 124 CSQGCDIG-----FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLD--ISL 176
S D+G +++ P +++ G P + L+ +C LL ++
Sbjct: 337 MSSVTDMGVVMRAMEKLRP---------ECMYQRDGYVFPV-VRGLSRLCNILLGRPLNK 386
Query: 177 SKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
SK+L ++W RPL YAA+DAHCL+
Sbjct: 387 SKKLSMTNWEKRPLARSSLEYAALDAHCLV 416
>gi|449675992|ref|XP_002154256.2| PREDICTED: probable exonuclease mut-7 homolog [Hydra
magnipapillata]
Length = 610
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQ-SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
++ PLK ++ T P+ + L + ++G D EWKP + +VS LQLA
Sbjct: 343 FKLPLKDVIIVDT-IPKLIEAEKILFKPKQVIGFDTEWKPSFTRAGEQDKVSTLQLAV-- 399
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLP-----SIWELLKELFVSPDILKLGFKFKQDLIY 118
VF++D+ + + ++ E + F S D++K+G+ DL
Sbjct: 400 ------------IDKVFIVDMLQLYVADSAENALREFFYKFFTSKDVVKIGYGIVGDLKI 447
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLAN------ICKELL 172
L F I +D+ I + + +S+ N + LL
Sbjct: 448 LIGMFAYMKEFIL--NASNLVDLNEISEKILKYPVTNAYLYPVQSVQNEKGLSLLIYRLL 505
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
SL K Q SDW RPL+ Q YAA+DA CL+E++ +
Sbjct: 506 GQSLDKTFQVSDWDKRPLSTNQIQYAALDAFCLLEVYKV 544
>gi|391336495|ref|XP_003742615.1| PREDICTED: probable exonuclease mut-7 homolog [Metaseiulus
occidentalis]
Length = 629
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 24/184 (13%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD---LSSIPLP 90
++G+DAEWKP R+SL+Q+A + V+L D LS P
Sbjct: 378 VIGVDAEWKPAMGLLQK-TRLSLIQMATR--------------QKVYLFDVLKLSETISP 422
Query: 91 SIWELLKE-LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH-- 147
W E +F +P LGF +D+ L + + F + D +++ H
Sbjct: 423 EDWASFYERVFDNPTGCILGFGIAEDIRKLEALSGTSLYMTYFKDLMIVRD--ALFTHRP 480
Query: 148 -LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
L + +K+ K L+ + LL L K QCSDW NRPL Q +YAA+DAHCLI
Sbjct: 481 DLMESVVDQKILKNHNGLSRLTCRLLGYPLDKSEQCSDWENRPLRPSQVHYAALDAHCLI 540
Query: 207 EIFN 210
++
Sbjct: 541 RCWD 544
>gi|255089332|ref|XP_002506588.1| predicted protein [Micromonas sp. RCC299]
gi|226521860|gb|ACO67846.1| predicted protein [Micromonas sp. RCC299]
Length = 1038
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 57/215 (26%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI------ 87
+VGLDAEW+P + V+LLQ+A + FL+D++S+
Sbjct: 591 VVGLDAEWRPHKHSP-----VALLQVATR--------------REAFLVDVASLMRRDEG 631
Query: 88 -------------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
+ L++L +PD+++LGF F+ DL L + + + R
Sbjct: 632 GDRYDRYDDRYDANAEAFDAFLRDLLDAPDVVRLGFGFEYDLSRLRRGYAGRLSSLERRR 691
Query: 135 VEPYLDITSIYNHLHHKQLGRKL---------------PKETK----SLANICKELLDIS 175
+ T + G L P + K LA + +L
Sbjct: 692 ENANDEDTDERRVNEFGETGHALGTRIVDVKALALCAFPDKQKLTRVGLATLVASVLGAY 751
Query: 176 LSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ K QCSDW RPLT +Q +YAA DAH L +F+
Sbjct: 752 VDKTEQCSDWERRPLTTDQVDYAAADAHVLTVLFD 786
>gi|330789845|ref|XP_003283009.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
gi|325087081|gb|EGC40462.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
Length = 662
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 42/183 (22%)
Query: 34 LVGLDAEWKPQRSHQS--NFP-RVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP 90
++G DAEW Q +Q +P +V+L+QL S+ + V+L+ +S +P
Sbjct: 171 IIGFDAEWSNQNQYQECEGYPHKVALIQL--------------SSKTDVYLIQISQ--MP 214
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYLDITSIYNHL 148
+I + L+++ V P ++K+G QD + S+F ++GC +D+ I
Sbjct: 215 TIPQSLEQILVDPRLIKVGVAISQDAATIFSSFSIVTKGC----------VDLVPI---- 260
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLI 206
GR + LA++ +L+ ++ K ++CS W N+ LT EQ YAAIDA
Sbjct: 261 -----GRLTNYQGNGLASLALNVLNANIDKNNLIRCSHWENKNLTSEQVMYAAIDAWIGR 315
Query: 207 EIF 209
EIF
Sbjct: 316 EIF 318
>gi|218885986|ref|YP_002435307.1| 3'-5' exonuclease [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756940|gb|ACL07839.1| 3'-5' exonuclease [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 201
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 39/200 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
+I ++ S E E L ++G D E +P R + N P SL+QLAC
Sbjct: 28 EIRIIRSEE--ELADAVDRLRDEDVLGFDTETRPTFRKGKVNLP--SLVQLAC------- 76
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+ VV+L L+ +P E L + DI+K G + D+ L F
Sbjct: 77 -------SDVVYLFQLNWLPFG---EALATVLSDADIVKTGVAVRDDIRDLQKLFAFNDA 126
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ + ++ R L ET L N+ L++ +SK QCS+WSNR
Sbjct: 127 GV-----------------VDLGEVARDLGLETHGLRNLAANFLEVRISKGAQCSNWSNR 169
Query: 189 PLTEEQKNYAAIDAHCLIEI 208
L +Q YAA DA EI
Sbjct: 170 ELAPQQVLYAATDAWVSREI 189
>gi|335281300|ref|XP_003122404.2| PREDICTED: probable exonuclease mut-7 homolog [Sus scrofa]
Length = 1150
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 27/196 (13%)
Query: 24 HLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
H A L +V +D EW+P P+ SL+Q+A + VFLLD
Sbjct: 667 HEAELLQPGQVVSVDLEWRPSFG-VGGRPQASLMQVAVE--------------GRVFLLD 711
Query: 84 LSSIPLPS-------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
L + P+ +L+ L P I KLG+ DL L ++ C ++
Sbjct: 712 LPQLLSPARGQEPQAFSQLVSRLLADPSITKLGYGMAGDLRSLGAS-CP-ALAQAQKQLR 769
Query: 137 PYLDITSIYNHLH---HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
LD+ ++ L G + L+ + +++L L K Q S+W RPL EE
Sbjct: 770 GSLDLLQVHKQLRVVDAPAPGVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEE 829
Query: 194 QKNYAAIDAHCLIEIF 209
Q YAA DA+CL+E++
Sbjct: 830 QLVYAAADAYCLLEVY 845
>gi|410979605|ref|XP_003996172.1| PREDICTED: probable exonuclease mut-7 homolog [Felis catus]
Length = 973
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 28/212 (13%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH + S E H L +VG+D EW+P P+ S++QLA +
Sbjct: 482 IHFLASWED-LARHEEALLQPGQVVGVDVEWRPSFG-TGGRPQASVMQLAVE-------- 531
Query: 71 SDESNASVVFLLDLSSIPLPSIWE-------LLKELFVSPDILKLGFKFKQDLIYLSSTF 123
VFL+DL + P+ + L+ L P + KLG+ DL L ++
Sbjct: 532 ------GRVFLMDLPVLSRPAGGQVSKAFSRLVSRLLSDPSVTKLGYGLAGDLRSLGAS- 584
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANICKELLDISLSKEL 180
C + ++ LD+ ++ + + G + + L+ + +++L L K
Sbjct: 585 CPALAHV-EKQLRGGLDLLRVHRQMRVVNMPAGGTYEARGLRGLSLLVQQVLGKPLDKTQ 643
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL+E Q YAA DA+CL+E+
Sbjct: 644 QLSNWDRRPLSEGQLVYAAADAYCLLEVHQAL 675
>gi|326930167|ref|XP_003211223.1| PREDICTED: probable exonuclease mut-7 homolog [Meleagris gallopavo]
Length = 916
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 54/215 (25%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L +VG+D EWKP PRVSLLQLA + DE VFLLDL
Sbjct: 381 KVLQPGQIVGIDMEWKPSFGMVGK-PRVSLLQLAVR---------DE-----VFLLDLPQ 425
Query: 87 I-----------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS--QGCDIGFD 133
+ LP I ++L + I KLG+ DL L++T CS +G D
Sbjct: 426 LLEQAEVKGEKEKLPHIIQML---YSDATITKLGYGMSGDLSSLAAT-CSTLKGMD---K 478
Query: 134 RVEPYLDITSIYNHLHHKQLGRK-------------------LPKETKSLANICKELLDI 174
+ + +D+ +I L + K L + K L+ + + +L
Sbjct: 479 QSQSVVDLLTIDKLLQKSSIDWKKGSLKVDALSPEQSCEDEGLRQPEKGLSLLVQHVLGK 538
Query: 175 SLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL EEQ YAA DA+CL+E++
Sbjct: 539 PLDKTEQMSNWEKRPLREEQILYAASDAYCLLEVY 573
>gi|347731627|ref|ZP_08864719.1| 3'-5' exonuclease family protein [Desulfovibrio sp. A2]
gi|347519577|gb|EGY26730.1| 3'-5' exonuclease family protein [Desulfovibrio sp. A2]
Length = 201
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 29 LSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
L ++G D E +P R + N P SL+QLAC + VV+L L+ +
Sbjct: 45 LRDEDVLGFDTETRPTFRKGKVNLP--SLVQLAC--------------SDVVYLFQLNWL 88
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + L + PDI+K G + D+ L + +
Sbjct: 89 PFG---DALASVLSDPDIVKTGVAVRDDIRDLQKLYAFNDAGV----------------- 128
Query: 148 LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
+ ++ R L ET L N+ L++ +SK QCS+WSNR L +Q YAA DA E
Sbjct: 129 VDLGEVARDLGLETHGLRNLAANFLEVRISKGAQCSNWSNRELAPQQVLYAATDAWVSRE 188
Query: 208 I 208
I
Sbjct: 189 I 189
>gi|149196457|ref|ZP_01873512.1| hypothetical protein LNTAR_14907 [Lentisphaera araneosa HTCC2155]
gi|149140718|gb|EDM29116.1| hypothetical protein LNTAR_14907 [Lentisphaera araneosa HTCC2155]
Length = 372
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 88/196 (44%), Gaps = 36/196 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L+RALS+ + LD E+ ++ P LLQ+ +A + L+DL
Sbjct: 14 LSRALSEKD-IALDTEFVWTKTFH---PIPGLLQI--------------KSAGEIHLIDL 55
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
P E+LKEL S D+ K+ QDL L FC FD Y +
Sbjct: 56 LIENFPK--EILKELLESRDVCKILHSPDQDL-KLFKLFCDAEAKNIFDTQLAYAFTGA- 111
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
PK+ SLA +C E++DI +SK Q SDW+ RPL + Q NYAA D
Sbjct: 112 -------------PKQV-SLAKLCLEMMDIEISKTQQVSDWTKRPLKDSQLNYAAEDVRY 157
Query: 205 LIEIFNIFQVKVAQKG 220
LIEI + K+ + G
Sbjct: 158 LIEITETLREKLKENG 173
>gi|78357431|ref|YP_388880.1| 3'-5' exonuclease [Desulfovibrio alaskensis G20]
gi|78219836|gb|ABB39185.1| 3'-5' exonuclease [Desulfovibrio alaskensis G20]
Length = 201
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 37/183 (20%)
Query: 27 RALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
RAL L+G D E +P R + N P SL+Q A + +V+L+ L
Sbjct: 43 RALHSEELIGFDTETRPTFRKGKMNLP--SLIQFAAR--------------DMVYLIHLG 86
Query: 86 SIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
+ E ++++ SP I+K G + D+ L C + + +D+
Sbjct: 87 WVAFS---EGIQDVLSSPHIVKTGVAVRDDIKDLKKLACFEDAAV--------VDLG--- 132
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
++ R+L ET L N+ LL+ +SK QCS+WSN L+ +Q +YAA DA
Sbjct: 133 ------EVARELGMETHGLRNLAANLLEFRISKAAQCSNWSNLELSRQQISYAATDAWVS 186
Query: 206 IEI 208
EI
Sbjct: 187 REI 189
>gi|308801591|ref|XP_003078109.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
gi|116056560|emb|CAL52849.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
Length = 1313
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 41/202 (20%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFP-----RVSLLQLACQPGPRFNPESDESNASVVFL 81
R L ++G+D EW ++ V++LQ+A Q G V +
Sbjct: 373 RYLWNQGMIGIDTEWGADVGEDADNADRSGDEVAILQIASQLG--------------VVI 418
Query: 82 LD----LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
LD L S P ++ + ++F ++LKLGF ++DL LS C F V+
Sbjct: 419 LDVPKLLYSCP-DTLETTIGKMFEDEEVLKLGFAVQEDLRRLSK------CHKAFKTVQG 471
Query: 138 YLDITSIYNHLHHKQLGRKL--PKETKS---------LANICKELLDISLSKELQCSDWS 186
+D+ ++ L K R + P T++ L+ + +L L K ++ SDWS
Sbjct: 472 VVDLQKLWKLLVSKARTRSVSAPWSTEAELLRYQPVGLSALVAAVLGKPLDKMMRMSDWS 531
Query: 187 NRPLTEEQKNYAAIDAHCLIEI 208
RPLT+ Q YAA+DA L+E+
Sbjct: 532 RRPLTQSQMEYAALDAWTLVEV 553
>gi|390458575|ref|XP_002743563.2| PREDICTED: probable exonuclease mut-7 homolog [Callithrix jacchus]
Length = 846
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ I+L+TS E H L +VG+D EW PR SLLQ
Sbjct: 380 DHYYQLPIPRENIYLLTSQED-LARHKDALLQPQQVVGVDLEWT-LVFIAGGRPRPSLLQ 437
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGFK 111
+A + VFLLD+ + P + +L+ +L P I KLG+
Sbjct: 438 VATE--------------GCVFLLDILAFTQPPAGQGAQAFSQLVAQLLSDPSITKLGYG 483
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYL--DITSIYNHLHHKQLGRKLPKETKS-----L 164
DL L + C I VE + + + H + G P ++ L
Sbjct: 484 MAGDLQKLGMS-----CPI-LAHVEKQVLGGVDLLLVHRQMRMAGMPTPGMARAGGLRGL 537
Query: 165 ANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+ + +++L +L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 538 SLLVQQVLGTTLDKTQQLSNWDRRPLFEEQLIYAAADAYCLLEVHQAL 585
>gi|195401270|ref|XP_002059237.1| GJ16284 [Drosophila virilis]
gi|194156111|gb|EDW71295.1| GJ16284 [Drosophila virilis]
Length = 621
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ + F + + L + ++ +D+EW Q+ ++ LLQ+A
Sbjct: 405 LLIVDTAATFERMLQHLQREQIIYMDSEWMQNVCAQN---QLCLLQIATT---------- 451
Query: 73 ESNASVVFLLDLSSIPLPSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIG 131
N ++ L W L +F +P+ILK+GF DL L + Q +
Sbjct: 452 -HNVYLIDCLASRQALHEEHWRALGANVFNNPNILKVGFSMLNDLSVLQRSLPLQ---LR 507
Query: 132 FDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSDWS 186
YLD+ +++ L K+ G +LP + +L ++ L L+K QCS+W+
Sbjct: 508 LHMPHHYLDLRNVWLELK-KRHGVELPYGNVNRAGDALTDLSMLCLGKKLNKANQCSNWA 566
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
NRPL EQ YAAIDA CL+ I++ VA
Sbjct: 567 NRPLRREQILYAAIDARCLLLIYDCLMSCVA 597
>gi|242022456|ref|XP_002431656.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516964|gb|EEB18918.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 734
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 11 IHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
I+L+ ST S F+ ++ +VGLDAEWKP + + ++L Q+A +
Sbjct: 356 IYLIDSTCS--FSKFLIDITDGVKVVGLDAEWKPCFGLKKS--ELALFQIATR------- 404
Query: 70 ESDESNASVVFLLD---LSSIPLPSIWELLKE-LFVSPDILKLGFKFKQDLIYLSSTFCS 125
VV+LLD LSS+ ++W E LF +P+ILKLGF + D +
Sbjct: 405 -------HVVYLLDIIALSSVVPENLWIRFSEILFGNPNILKLGFGLQGDFTIIQEKL-- 455
Query: 126 QGCDIGFDRV----EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKEL-LDISLSKEL 180
+G + LD+ ++ L + S N E L L K
Sbjct: 456 ----LGLHGIIIPETSLLDLEILWRVLQNNNFTFPHAASVSSTLNSFIEFCLGEKLDKSN 511
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q SDW RPL Q YAA+DA+CL+E +++
Sbjct: 512 QFSDWEKRPLRHSQIVYAALDAYCLLEAYDV 542
>gi|195475951|ref|XP_002090246.1| GE12998 [Drosophila yakuba]
gi|194176347|gb|EDW89958.1| GE12998 [Drosophila yakuba]
Length = 625
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L+ ++ +F + L Q ++ LD+EW + ++ +LQ+A
Sbjct: 410 LIIVDKAEQFDRMLYHLQQECVIYLDSEWMQSVCGDN---QLCVLQIA------------ 454
Query: 73 ESNASVVFLLD-LSSIPL-PSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
V+L+D L+ L W LL +F + +I K+GF DL L S
Sbjct: 455 --TGHNVYLIDCLARESLCEEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQR---SLPLH 509
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KETKSLANICKELLDISLSKELQCSD 184
+ YLD+ +++ L ++ G +LP + +L ++ L L+K QCS+
Sbjct: 510 LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVA 217
W+NRPL EQ YAA+DA CL+ I+N +V+
Sbjct: 570 WANRPLRREQILYAAMDARCLLLIYNTLIARVS 602
>gi|410926767|ref|XP_003976844.1| PREDICTED: probable exonuclease mut-7 homolog [Takifugu rubripes]
Length = 898
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 46/211 (21%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL- 89
+ +VG+D EW+P S+ +V+L+QLA +D+ VFLLD+ +
Sbjct: 366 EGGVVGVDMEWQPTFGCSSS-QQVALMQLAV---------TDQ-----VFLLDVCAEGFG 410
Query: 90 --PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF--------CSQGCDIGFDRVEPYL 139
P ++ LF S ++LKLG+ DL + ST+ +QG L
Sbjct: 411 QHPETVSFIRSLFSSKNVLKLGYSTSGDLRCVLSTWPQFSEEPLVTQG----------VL 460
Query: 140 DITSIYNHLHHKQLGRKL--PKET--------KSLANICKELLDISLSKELQCSDWSNRP 189
D+ +++ + ++ R KE K L+ + +++L L K Q S+W RP
Sbjct: 461 DLVNVHQKIQRSKVNRTQNGSKEVLVGEGSAEKGLSLLVQQVLGRPLDKREQMSNWKKRP 520
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
L Q YA DA+CL+E++ + + A G
Sbjct: 521 LRASQIRYAVADAYCLLEVYTVLKSNPAHFG 551
>gi|334312267|ref|XP_001374708.2| PREDICTED: probable exonuclease mut-7 homolog [Monodelphis
domestica]
Length = 1091
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 88/213 (41%), Gaps = 49/213 (23%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +VG+D EW+P PRVS+LQ+A + V+LLDL
Sbjct: 411 LQPGQVVGIDMEWRPSFGLVGR-PRVSVLQIATK--------------EHVYLLDLLQFS 455
Query: 89 LPS-----------IWELLKELFVSPDILKLGFKFKQDLIYLSSTF--------CSQGCD 129
IW L E P I KLG+ DL LS+T+ +QG
Sbjct: 456 KLDKEEKEKELCHFIWSLFSE----PSITKLGYGMSGDLCSLSTTYPALREMEKQAQGI- 510
Query: 130 IGFDRVEPYLDITSIYNHLHH----------KQLGRKLPKETKSLANICKELLDISLSKE 179
+ +V+ L S HH ++ K L+ + + LL L K
Sbjct: 511 LDLLQVDKQLQKNSGLWKKHHIPVDSLCQEPSSKTKRTRHAEKGLSLLVQNLLGKPLDKR 570
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
Q S+W RPL EEQ YAA DA+CL+E++ +
Sbjct: 571 EQLSNWEKRPLREEQILYAASDAYCLLEVYEVL 603
>gi|12321757|gb|AAG50917.1|AC069159_18 3'-5' exonuclease, putative [Arabidopsis thaliana]
Length = 582
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
+VG+D EWKP S +VS++Q+ SD + +F+LDL + +
Sbjct: 380 VVGIDCEWKPNYIKGSKQNKVSIMQIG----------SD----TKIFILDLIKLYNDASE 425
Query: 94 EL---LKELFVSPDILKL--------------GFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
L L + S LKL G+ F+ D+ L+ ++ C F+R +
Sbjct: 426 ILDNCLSHILQSKSTLKLVSLTEDYPDHKLSSGYNFQCDIKQLALSYGDLKC---FERYD 482
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
LDI +++N + LA + K++L +SL+K + SDW RPL++ Q
Sbjct: 483 MLLDIQNVFN------------EPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLE 530
Query: 197 YAAIDAHCLIEIF 209
YAA+DA LI IF
Sbjct: 531 YAALDAAVLIHIF 543
>gi|363740369|ref|XP_415556.3| PREDICTED: probable exonuclease mut-7 homolog [Gallus gallus]
Length = 999
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 97/212 (45%), Gaps = 48/212 (22%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L +VG+D EW+P PRVSLLQLA + DE VFLLDL
Sbjct: 381 KVLKPGQIVGIDMEWRPSFGMVGK-PRVSLLQLAVR---------DE-----VFLLDLPR 425
Query: 87 I-----------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS--QGCDIGFD 133
+ LP ++ L+ I KLG+ DL L++T CS +G D
Sbjct: 426 LLEQAEVKGEKEKLP---HFIQRLYSDATITKLGYGMSGDLSSLAAT-CSTLKGMDKQSQ 481
Query: 134 RVEPYLDITSIY--NHLHHKQLGRKL----PKET----------KSLANICKELLDISLS 177
V L I + + K+ G K+ P+++ K L+ + + +L L
Sbjct: 482 SVVDLLTIDKLLQKSSTDWKKGGLKVDVLSPEQSCEDGGLRQPEKGLSLLVQHVLGKPLD 541
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
K Q S+W RPL EEQ YAA DA+CL+E++
Sbjct: 542 KTEQMSNWEKRPLREEQILYAASDAYCLLEVY 573
>gi|321455674|gb|EFX66801.1| hypothetical protein DAPPUDRAFT_331718 [Daphnia pulex]
Length = 224
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 54/238 (22%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ AL +S++VG+D EW P + ++LQ+A +FLLD+
Sbjct: 7 IGSALGKSTVVGVDIEWPPF----GTLAKATVLQIATHDK--------------IFLLDI 48
Query: 85 SSI------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
S+ + + +L+ +LF + ILKLG+ K+DL LS + G D+ + +
Sbjct: 49 FSLREDKSCSVINSQQLIGDLFGNRHILKLGYGLKEDLHVLSRSLPGIG-DVS-KSIVNW 106
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKE------------LLDISLSKELQCSDWS 186
+DI ++++++ K LP + + C + LL + L K+ Q SDW
Sbjct: 107 IDIKNLWSNIETK-YPSFLPPAVLNDGDTCSQETHKGLSGLVKLLLGLPLDKKEQFSDWQ 165
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEK 244
RPL Q YAA+DA CL+E+++ Q + S L++ +G+LEK
Sbjct: 166 KRPLRTSQFIYAALDAFCLLEVYDYLQKR---------------SQFLEIDWRGVLEK 208
>gi|198438094|ref|XP_002131917.1| PREDICTED: similar to MUTator family member (mut-7) [Ciona
intestinalis]
Length = 921
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 40/208 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL---- 84
L+ +S VG+D+EW SN V++LQLA Q S V+LLD+
Sbjct: 379 LNNNSCVGIDSEWA---FSTSNTDGVAILQLAVQ--------------SNVYLLDVFNFT 421
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+ + ++ L +L S + LKLG+ +D+ L+ C I + + +
Sbjct: 422 NQMNTCTLGLFLAKLIKSKNHLKLGYGLNEDMQKLA-------CSIPLLKEALQASVRVL 474
Query: 145 YNHLHHKQLGRKLPK------------ETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
H+ K R PK + L+ + + L +L K Q SDW RPL
Sbjct: 475 DFHIVLKHACRLYPKLLAMENDADELCKHSGLSKLALQTLGQALDKSEQISDWERRPLRV 534
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
Q YAA+DA CL+EI+++ +++ + G
Sbjct: 535 TQVTYAALDAFCLLEIYDVLSIRLQELG 562
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 284 LNTMPMDESLVKIVRKYGEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQG 343
L + + +L KI+ + K+ R K P T + G+ + V + ++K
Sbjct: 558 LQELGCNVTLEKIINQPVPKVKRRGRGKGPATDMQAGQNSNEVSILPQDK---------- 607
Query: 344 PPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDA 379
PP ++S K +CD M++GLA+ LRC GIDA
Sbjct: 608 PPVNEVSARD---FKVVCDNMLQGLARQLRCCGIDA 640
>gi|242277603|ref|YP_002989732.1| 3'-5' exonuclease [Desulfovibrio salexigens DSM 2638]
gi|242120497|gb|ACS78193.1| 3'-5' exonuclease [Desulfovibrio salexigens DSM 2638]
Length = 198
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 84/188 (44%), Gaps = 41/188 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ L+G D E +P ++P SL+QLA + VFLL L+ I
Sbjct: 44 LSRCELLGFDTETRPVFRKGVSYPP-SLIQLATE--------------DCVFLLHLNHI- 87
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQG-CDIGFDRVEPYLDITSIY 145
S+ + +KE+ S DI+K G D+ L S F +G D+G
Sbjct: 88 --SLSDHIKEVLSSADIIKTGVAVINDVKELRDVSPFEGKGFVDLG-------------- 131
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L R L +T L N+ LL +SK +QCS+W + LT +Q YAA DA
Sbjct: 132 ------DLARSLEMQTNGLRNLAANLLGFRISKGVQCSNWGRKELTPQQITYAATDAWVS 185
Query: 206 IEIFNIFQ 213
EI+ FQ
Sbjct: 186 REIYLKFQ 193
>gi|299473129|emb|CBN78705.1| Similarity to ribonuclease D (RNase D) [Ectocarpus siliculosus]
Length = 1260
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLA-------------CQPGPRFNPESDESNAS 77
Q + +D EW+P R + V LLQLA C+P +S A+
Sbjct: 667 QQPALAVDCEWRPARVAGTPANPVCLLQLAAGERTFVVDMLHVCRP---------KSAAA 717
Query: 78 VVFLLDLSSIPLPSIWELLKE----LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
++ ++ L LL+E + SP ++K+G K D L ++ C F
Sbjct: 718 ATDAVEETASGLTKREALLEEALGAVLGSPGVVKVGLGPKADFQSLIRSYPHMPC---FR 774
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
RV +++ + ++ L K E SL+ +C +L L K QCSDW NRPL+
Sbjct: 775 RVCGVVNLCHVASNA--SSLRGKPADEKASLSRLCNVVLGKPLDKSEQCSDWGNRPLSGR 832
Query: 194 QKNYAAIDA 202
QK YAA+DA
Sbjct: 833 QKRYAALDA 841
>gi|57340046|gb|AAW50010.1| hypothetical protein FTT0776 [synthetic construct]
Length = 399
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 43/211 (20%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
+ ++ +T + + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 25 LEMIINT-NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATE-------- 72
Query: 71 SDESNASVVFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+ +FL+D L + LKE+F DILK+ D+ + F C+
Sbjct: 73 ------NEIFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCE 119
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSN 187
+ N++ QL + SL + KE+LDI + KE Q SDW N
Sbjct: 120 V---------------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRN 164
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
RPLT+ Q NYA D LI++ Q ++A+
Sbjct: 165 RPLTQNQLNYAIKDVEYLIQLKEYLQQQLAK 195
>gi|291224294|ref|XP_002732140.1| PREDICTED: Probable exonuclease mut-7 homolog [Saccoglossus
kowalevskii]
Length = 1166
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 38/208 (18%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
+++G+D+EW+P +VSLLQLA + VF+LD+ ++
Sbjct: 467 AIIGIDSEWRPAFGPICEPVKVSLLQLA--------------SIDAVFILDMMTLSQCVD 512
Query: 93 WELLKE----LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
++LK+ LF + DILKLG+ D+ L ++ R+ +D++ + ++
Sbjct: 513 VDILKDFMLKLFTTHDILKLGYGIDGDIKMLFKSYPLMRNAADLQRI---VDLSVLTRNI 569
Query: 149 HHKQLGRKLPKETKS----------------LANICKELLDISLSKELQCSDWSNRPLTE 192
K+ L + + L+ + + L L+K + SDW RPL +
Sbjct: 570 Q-KESPELLQNSSTTEDASGEGSGKKGKEKGLSELVQRCLGKPLNKMERLSDWERRPLRQ 628
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
Q YAA+DA+CL+E+++ + KV + G
Sbjct: 629 AQLIYAALDAYCLLEVYDHIRNKVKESG 656
>gi|134302344|ref|YP_001122313.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|421752196|ref|ZP_16189228.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|421754061|ref|ZP_16191044.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|421757785|ref|ZP_16194655.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|421759628|ref|ZP_16196457.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|424674949|ref|ZP_18111861.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
gi|134050121|gb|ABO47192.1| putative ribonuclease D [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409085560|gb|EKM85698.1| ribonuclease D [Francisella tularensis subsp. tularensis 831]
gi|409085718|gb|EKM85850.1| ribonuclease D [Francisella tularensis subsp. tularensis AS_713]
gi|409090457|gb|EKM90474.1| ribonuclease D [Francisella tularensis subsp. tularensis 70102010]
gi|409091730|gb|EKM91720.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700103]
gi|417434204|gb|EKT89163.1| ribonuclease D [Francisella tularensis subsp. tularensis 70001275]
Length = 364
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|89256742|ref|YP_514104.1| ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115315142|ref|YP_763865.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|254368041|ref|ZP_04984061.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|422939063|ref|YP_007012210.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
gi|89144573|emb|CAJ79888.1| Ribonuclease D [Francisella tularensis subsp. holarctica LVS]
gi|115130041|gb|ABI83228.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|134253851|gb|EBA52945.1| ribonuclease D [Francisella tularensis subsp. holarctica 257]
gi|407294214|gb|AFT93120.1| ribonuclease D [Francisella tularensis subsp. holarctica FSC200]
Length = 364
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|187931952|ref|YP_001891937.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
gi|187712861|gb|ACD31158.1| ribonuclease D [Francisella tularensis subsp. mediasiatica FSC147]
Length = 364
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|56707887|ref|YP_169783.1| ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670358|ref|YP_666915.1| ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|254370381|ref|ZP_04986386.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874700|ref|ZP_05247410.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|379717133|ref|YP_005305469.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|379725737|ref|YP_005317923.1| ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|385794536|ref|YP_005830942.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|421755410|ref|ZP_16192356.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
gi|56604379|emb|CAG45409.1| Ribonuclease D [Francisella tularensis subsp. tularensis SCHU S4]
gi|110320691|emb|CAL08792.1| Ribonuclease D [Francisella tularensis subsp. tularensis FSC198]
gi|151568624|gb|EDN34278.1| hypothetical protein FTBG_00144 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840699|gb|EET19135.1| ribonuclease D [Francisella tularensis subsp. tularensis MA00-2987]
gi|282159071|gb|ADA78462.1| Ribonuclease D [Francisella tularensis subsp. tularensis NE061598]
gi|377827186|gb|AFB80434.1| Ribonuclease D [Francisella tularensis subsp. tularensis TI0902]
gi|377828810|gb|AFB78889.1| Ribonuclease D [Francisella tularensis subsp. tularensis TIGB03]
gi|409088212|gb|EKM88289.1| ribonuclease D [Francisella tularensis subsp. tularensis 80700075]
Length = 364
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|428170043|gb|EKX38971.1| hypothetical protein GUITHDRAFT_143786 [Guillardia theta CCMP2712]
Length = 694
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 41/190 (21%)
Query: 35 VGLDAEWKP-QRSHQSNFPRVSLLQLA-----CQPGPRFNPESDESNASVVFLLDLSSIP 88
+G+DAEWKP +R+++ N RVSL+QL+ C+ G P+ +F
Sbjct: 513 IGIDAEWKPIRRTNERN--RVSLMQLSTTTNECRRGSWKKPKGQ------LFC------- 557
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD-------I 141
+ LK + + I+KLGF+ + D+ + G D+ ++ P ++ +
Sbjct: 558 -----QSLKNVVENSKIVKLGFELRDDIRKIRQV----GADM--TQLGPLVEADAQDRQV 606
Query: 142 TSIYNHLHHKQLGR-KLPKETKSLANICKELLD-ISLSKELQCSDWSNRPLTEEQKNYAA 199
+++ H + R + K SLA + +E+LD L+KE SDWS RPL+ Q YAA
Sbjct: 607 NGVFDLSHWAKSSRPRTKKYQSSLAGLSREVLDGAELNKEQAMSDWSQRPLSAPQLRYAA 666
Query: 200 IDAHCLIEIF 209
+DA L+ +F
Sbjct: 667 LDALVLLPLF 676
>gi|156502902|ref|YP_001428967.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|290953633|ref|ZP_06558254.1| ribonuclease D [Francisella tularensis subsp. holarctica URFT1]
gi|423051113|ref|YP_007009547.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
gi|156253505|gb|ABU62011.1| ribonuclease D [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|421951835|gb|AFX71084.1| ribonuclease D [Francisella tularensis subsp. holarctica F92]
Length = 363
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|403301404|ref|XP_003941380.1| PREDICTED: probable exonuclease mut-7 homolog [Saimiri boliviensis
boliviensis]
Length = 874
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ ++L+ S E H L +V +D EW P PR SLLQ
Sbjct: 361 DRHYQLPIPRENVYLLASRED-LARHEGALLQPQQVVAVDLEWTPVFV-AGGRPRPSLLQ 418
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLP-------SIWELLKELFVSPDILKLGFK 111
+A + VFLLD+ ++ P + +L+ +L P I KLG+
Sbjct: 419 VAME--------------GHVFLLDIQALTQPPAGQGARAFSQLVTQLLSDPSITKLGYG 464
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANIC 168
DL L T C + +V +D+ ++ + + G + L+ +
Sbjct: 465 MAGDLQKLG-TSCPALAHVE-KQVLGGVDLLLVHRQMRVAGMPTPGVDGAGGLRGLSLLV 522
Query: 169 KELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+++L +L K Q S+W RPL EE+ YAA DA+CL+E+
Sbjct: 523 QQVLGTTLDKTQQLSNWDRRPLCEEKLIYAAADAYCLLEVHQAL 566
>gi|118497275|ref|YP_898325.1| ribonuclease D [Francisella novicida U112]
gi|194323578|ref|ZP_03057355.1| ribonuclease D [Francisella novicida FTE]
gi|208779068|ref|ZP_03246414.1| ribonuclease D [Francisella novicida FTG]
gi|118423181|gb|ABK89571.1| ribonuclease D [Francisella novicida U112]
gi|194322433|gb|EDX19914.1| ribonuclease D [Francisella tularensis subsp. novicida FTE]
gi|208744868|gb|EDZ91166.1| ribonuclease D [Francisella novicida FTG]
Length = 364
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DI+K+ D+ + F C++
Sbjct: 49 IFLIDTLEDLEFKK----LKEIFEDKDIIKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|254374109|ref|ZP_04989591.1| ribonuclease D [Francisella novicida GA99-3548]
gi|151571829|gb|EDN37483.1| ribonuclease D [Francisella novicida GA99-3548]
Length = 364
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DI+K+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDIIKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|254372648|ref|ZP_04988137.1| ribonuclease III [Francisella tularensis subsp. novicida GA99-3549]
gi|151570375|gb|EDN36029.1| ribonuclease III [Francisella novicida GA99-3549]
Length = 364
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DI+K+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDIIKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NYA D LI++ Q ++A+
Sbjct: 147 NYAIKDVEYLIQLKEYLQQQLAK 169
>gi|385792618|ref|YP_005825594.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676764|gb|AEB27634.1| Ribonuclease D [Francisella cf. novicida Fx1]
Length = 364
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEI 208
NYA D LI++
Sbjct: 147 NYAIKDVEYLIQL 159
>gi|346467133|gb|AEO33411.1| hypothetical protein [Amblyomma maculatum]
Length = 210
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 79 VFLLDLSSIPLP---SIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
VF+LD+ + S W EL E+ S ILKLG+ +DL L+ T + +R
Sbjct: 22 VFILDVPKLVAELQGSDWDELFSEVLSSHSILKLGYGIAEDLRLLADTVMRPSAKV--NR 79
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
V + T + + PK K LA + +L + L+K +CSDW RPL
Sbjct: 80 VVDLCNFTQKLQRDYPSVIKPVYPKLNCKGLAELTHLMLGLPLNKNERCSDWEKRPLRPS 139
Query: 194 QKNYAAIDAHCLIEIF 209
Q YAA+DA+CL++I+
Sbjct: 140 QTVYAALDAYCLLQIY 155
>gi|324504376|gb|ADY41890.1| Exonuclease mut-7, partial [Ascaris suum]
Length = 953
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 94/230 (40%), Gaps = 59/230 (25%)
Query: 24 HLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
L SS++G+D EWKP S +V+LLQ+ S S + +V ++
Sbjct: 430 QLIEVFKTSSIIGIDTEWKPM--FLSTVEQVALLQV-----------SIPSCSYLVDVVK 476
Query: 84 LSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF--------------C---- 124
L W E K LF + +KLGF F D+ L +TF C
Sbjct: 477 LEDEVSEEEWIEFFKALFCTESSIKLGFDFANDMRVLRATFPFLESMQPDMKNVICIMKL 536
Query: 125 --------SQGCDI------GFDRVEPYLDIT-SIYNHLHHKQLGRKLPKETKSLANICK 169
S D+ G D E D + S LH K L ++C
Sbjct: 537 ATSLMSENSASLDLPTGEAHGSDSNENTTDESPSDEQQLHFK------------LTDLCY 584
Query: 170 ELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
+L L K Q +W+ RPL EQ YAA+DA+CLI+I++ + + ++
Sbjct: 585 RILGEPLDKREQIGNWAMRPLRPEQMKYAAMDAYCLIKIYDRMKARATEE 634
>gi|410028432|ref|ZP_11278268.1| ribonuclease D [Marinilabilia sp. AK2]
Length = 200
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+I LV S + + +A L++ SL+G D E +P + + VSLLQLA +
Sbjct: 22 EIVLVNSKD--QIKEVAAELNRHSLLGFDTETRPSFRKGTQY-YVSLLQLATE------- 71
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
FL+ L+ I +P++ ++E+ P I+K+G DL L +
Sbjct: 72 -------ETAFLIRLNEIGMPAV---IQEILEDPQIIKIGAAVLDDLRAL------RKVA 115
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
+GF E + D+ + + +G + N+ +L++ +SK Q S+W
Sbjct: 116 VGF-HPESFFDLNDELKKVGFQNIGVR---------NLAAMVLNMRISKSEQVSNWEAAE 165
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVK 215
LTE+Q+ YAA DA +EI+ Q +
Sbjct: 166 LTEKQQLYAATDAWVCLEIYKKLQYQ 191
>gi|346466963|gb|AEO33326.1| hypothetical protein [Amblyomma maculatum]
Length = 190
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 79 VFLLDLSSIP---LPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
VF+LD+ + S W+ L E+ S ILKLG+ +DL ++ T +
Sbjct: 22 VFILDMLRLVGELQASDWDKLFSEILSSHKILKLGYGIAEDLRLVAETVMQPNA-----K 76
Query: 135 VEPYLDITSIYNHLHHKQLGRKLP----KETKSLANICKELLDISLSKELQCSDWSNRPL 190
V LD+ + L H G P ++ K LA + L + L+K +CS+W RPL
Sbjct: 77 VSRVLDLCNFAQKLRHDYPGVIKPVDPRRKCKGLAELTYSTLGLPLNKSERCSNWEKRPL 136
Query: 191 TEEQKNYAAIDAHCLIEIFN 210
Q YAA+DA+CL++I+
Sbjct: 137 RPSQTVYAALDAYCLLQIYE 156
>gi|404450237|ref|ZP_11015222.1| ribonuclease D [Indibacter alkaliphilus LW1]
gi|403764197|gb|EJZ25111.1| ribonuclease D [Indibacter alkaliphilus LW1]
Length = 200
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 17 TESPEFTH-LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESN 75
E+ E H A+ L++ +L+G D E +P + +VSLLQL S
Sbjct: 26 VETEEQIHEAAQELNRHTLIGFDTETRPSFRKGVQY-QVSLLQL--------------ST 70
Query: 76 ASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRV 135
A V FL L I LPS +K + +P I+K+G DL L IGF +
Sbjct: 71 AEVAFLFRLHQIGLPSS---IKAILENPKIVKIGAAVLDDLRGLKK------ISIGF-QP 120
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
+ + D+ + + +G + N+ +LDI +SK Q S+W LT++QK
Sbjct: 121 KSFFDLNAELKKVGFHNVGVR---------NLSAMVLDIRISKSEQVSNWEAPELTDKQK 171
Query: 196 NYAAIDAHCLIEIFNIFQ 213
YAA DA +E++ Q
Sbjct: 172 VYAATDAWVCLEVYKKLQ 189
>gi|254369642|ref|ZP_04985652.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122601|gb|EDO66730.1| hypothetical protein FTAG_00956 [Francisella tularensis subsp.
holarctica FSC022]
Length = 364
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+QLA +
Sbjct: 6 NKQLNNVIEILKNTSQIAVDTEFYWMRTY---YPELCLVQLATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LKE+F DILK+ D+ + F C++
Sbjct: 49 IFLIDTLKDLEFKK----LKEIFEDKDILKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT+ Q
Sbjct: 95 --------NNIFDTQLAATFLGFQTQSSLKTLLKEILDIEIEKESQFSDWRNRPLTQNQL 146
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQ 218
NY+ D LI++ Q ++A+
Sbjct: 147 NYSIKDVEYLIQLKEYLQQQLAK 169
>gi|328770378|gb|EGF80420.1| hypothetical protein BATDEDRAFT_88588 [Batrachochytrium
dendrobatidis JAM81]
Length = 715
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+G+DAEW Q S R+S+ Q+A N S V++LDL ++ L
Sbjct: 553 IGIDAEWYNQGSD-----RMSIFQIAV----LLNDTSRR-----VYILDLFNLDLTETCN 598
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY--LDITSIYNHLHHKQ 152
+L LF S I LGF QDL L++ + PY +D+ + L +
Sbjct: 599 VLTALFSSKRITTLGFDGVQDLKKLNALMPNLPL--------PYNLVDLNKLSMELFADK 650
Query: 153 LGRK-LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L R + K+ L+++ +LD +L K ++ +DW+ RPL + Q YAA D+ LI+I+
Sbjct: 651 LKRHDIKKQQLGLSDLVLVVLDKTLDKRVRLTDWNRRPLRQCQLTYAASDSDVLIDIY 708
>gi|436840612|ref|YP_007324990.1| 3'-5' exonuclease [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432169518|emb|CCO22886.1| 3'-5' exonuclease [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 198
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 83/188 (44%), Gaps = 41/188 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ L+G D E +P ++P SL+QLA V+LL LS I
Sbjct: 44 LSKCKLLGFDTETRPVFRKGLSYPP-SLIQLATD--------------DCVYLLHLSHI- 87
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQG-CDIGFDRVEPYLDITSIY 145
S+ + +K+L S DI+K G D+ L S F +G D+G
Sbjct: 88 --SLSDYIKKLLSSADIIKTGVAVINDVKELRQVSPFDGKGFVDLG-------------- 131
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L R L +T L N+ LL +SK +QCS+W + LT +Q YAA DA
Sbjct: 132 ------DLARSLEMQTNGLRNLAANLLGFRISKGVQCSNWGRKELTPQQLTYAATDAWVS 185
Query: 206 IEIFNIFQ 213
EI+ F+
Sbjct: 186 REIYLKFK 193
>gi|167536930|ref|XP_001750135.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771297|gb|EDQ84965.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 26/177 (14%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++GLD+EWKP+ ++ P V++LQLA + + +LD ++P S
Sbjct: 466 ILGLDSEWKPRTLSHADEP-VAILQLATR--------------DALVILDTLALPSSSYD 510
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
L +L+ ++K GF FK D+ L + S C F+ + +++ L H
Sbjct: 511 PWLLQLWTDETVVKTGFAFKGDMTKLRHSAPSARC---FEALHAFVE-------LEHAAK 560
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
SL ++ + L+K + SDWS RPLT+ Q +YAA+DA +++
Sbjct: 561 A-YCADWGASLGSLTATVFGRHLNKVDRMSDWSQRPLTKRQLHYAALDAWICVKLLE 616
>gi|154275864|ref|XP_001538777.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413850|gb|EDN09215.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 808
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S Q + VS++QLA
Sbjct: 574 KEITVHYCTSLQTME--RVAKLFLSETIVGLDVEWKAQASAQDSLVDNVSVIQLA----- 626
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
S E A +F L L + P S+ L LK + SPDI+K+G + D
Sbjct: 627 -----SKERIA--IFHLALFN-PANSLQHLLSPTLKRILESPDIVKVGVAIRAD------ 672
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--E 179
C++ R + +++ ++ + H + + K +LA +E L + L K E
Sbjct: 673 --CTRLYKYLGIRTDNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVEEHLGLPLDKDPE 730
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
++C WS + L Q Y A D + +++F++ + K Q
Sbjct: 731 IRCGGWSKK-LNYRQVQYVATDPYAALQLFHVLEAKRLQ 768
>gi|312068949|ref|XP_003137453.1| hypothetical protein LOAG_01867 [Loa loa]
Length = 911
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 12 HLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
H + +PE L + ++ L+G+D EWKP S RV+L Q+ +
Sbjct: 392 HPIKVIATPEDLEKLYPVIEEADLIGIDTEWKPLFMCTSE--RVALFQICVRRC------ 443
Query: 71 SDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------ 123
+ +V ++ L + W + K LF +KLGF F DL L ++F
Sbjct: 444 -----SYLVDVITLEDVLTKEQWTQFFKALFSDSPAIKLGFDFLNDLRVLHASFPYLQPL 498
Query: 124 -------CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS--LANICKE 170
C P +LD N ++ L + ET L ++C+
Sbjct: 499 EEMKNVICVLKLVKNLLTSNPAFLDFGHSANLSLSSRNENLLDAVSDETVHFRLTDLCQM 558
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
+L +L K Q +W+ RPL EQ YAA+D +CL+++++ +++ ++ N
Sbjct: 559 VLGEALDKTEQIGNWAMRPLRREQMKYAAMDGYCLLDLYDKLKIRAEREYN 609
>gi|393911852|gb|EFO26611.2| hypothetical protein LOAG_01867 [Loa loa]
Length = 925
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 12 HLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
H + +PE L + ++ L+G+D EWKP S RV+L Q+ +
Sbjct: 406 HPIKVIATPEDLEKLYPVIEEADLIGIDTEWKPLFMCTS--ERVALFQICVRRC------ 457
Query: 71 SDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------ 123
+ +V ++ L + W + K LF +KLGF F DL L ++F
Sbjct: 458 -----SYLVDVITLEDVLTKEQWTQFFKALFSDSPAIKLGFDFLNDLRVLHASFPYLQPL 512
Query: 124 -------CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS--LANICKE 170
C P +LD N ++ L + ET L ++C+
Sbjct: 513 EEMKNVICVLKLVKNLLTSNPAFLDFGHSANLSLSSRNENLLDAVSDETVHFRLTDLCQM 572
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
+L +L K Q +W+ RPL EQ YAA+D +CL+++++ +++ ++ N
Sbjct: 573 VLGEALDKTEQIGNWAMRPLRREQMKYAAMDGYCLLDLYDKLKIRAEREYN 623
>gi|348687566|gb|EGZ27380.1| hypothetical protein PHYSODRAFT_321189 [Phytophthora sojae]
Length = 337
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 43/211 (20%)
Query: 26 ARALSQSSLVGLDAEWKPQR-SHQSNFPRV--SLLQLACQPGPRFNPESDESNASVVFLL 82
A+ L + +VG DAEWK R + N P +L+QLA + A VV ++
Sbjct: 126 AQYLMKQPVVGFDAEWKAIRVCAEPNNPTAPCALIQLASR-----------DKAFVVDMV 174
Query: 83 DLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+LS +L LF S +LKLGF D + + ++G F + +D+
Sbjct: 175 ELSGHD-----HILAPLFQSDQVLKLGFNPTGD-VKVFRPLLAEGGTTKFS-ITALVDLQ 227
Query: 143 SIYNHLHHK--------------------QLGRKLPKETKSLANICKELLDISLSKELQC 182
++ +L G + KE L+ + + L + L K ++
Sbjct: 228 AVARNLRGSGSSVNSNNPYAGCGDDNNCSTTGNEAFKE--GLSAVAETYLGLPLDKRVRM 285
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
SDW RPLT Q +YAA+DAH L++I++ Q
Sbjct: 286 SDWEGRPLTRAQLHYAALDAHVLLQIYDKMQ 316
>gi|326435716|gb|EGD81286.1| hypothetical protein PTSG_11323 [Salpingoeca sp. ATCC 50818]
Length = 1526
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 53 RVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKF 112
RVS+LQ+A + +LD+ ++ + +LF P I+K+GF F
Sbjct: 654 RVSILQIA--------------RHDALVILDMLALEPAHFHAFVTDLFADPAIIKVGFAF 699
Query: 113 KQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELL 172
D+ L TF C F + LD+ S + H L PK + L + + +
Sbjct: 700 DGDMKMLRKTFPDAEC---FSTLRSLLDLQS-FRH----ALTSAGPK-SGGLKELVRHFM 750
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
L K Q S+W+ RPLT Q +YAA+DAH + +
Sbjct: 751 HKPLDKTEQMSNWNRRPLTPSQLHYAALDAHVCVSL 786
>gi|225556093|gb|EEH04383.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 963
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 31/219 (14%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S Q + VS++QLA +
Sbjct: 729 KEITVHYCTSLQTME--RVAKLFLSETIVGLDVEWKAQASAQDSLVDNVSVIQLASK--- 783
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
+F L L + P S+ L LK + SPDI+K+G + D
Sbjct: 784 ---------ERIAIFHLALFN-PANSLQHLLSPTLKRILESPDIVKVGVAIRAD------ 827
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--E 179
C++ R +++ ++ + H + + K +LA +E L + L K E
Sbjct: 828 --CTRLYKFLGIRTNNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVEEHLGLPLDKDPE 885
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
++C WS + L Q Y A D + +++F++ + K Q
Sbjct: 886 IRCGGWSKK-LNYRQVQYVATDPYAALQLFHVLEAKRLQ 923
>gi|405964657|gb|EKC30115.1| Putative exonuclease mut-7-like protein [Crassostrea gigas]
Length = 737
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 1 MDCTYRK----PLKIHLVTSTESPEFTHLARALSQSSL-VGLDAEWKPQRSHQSNFPRVS 55
MD Y K P I LV + E ++ LS+ L +G+D+EWKP S + R++
Sbjct: 247 MDAYYYKLNLDPSSIQLVDTKE--KYHECISRLSRPGLTIGVDSEWKP--SFGNTTQRIA 302
Query: 56 LLQLACQPGPRFNPESDESNASVVFLLD---LSSIPLPSIWELLKE-LFVSPDILKLGFK 111
L+Q A SD+ +FLLD L S+ S W LL LF + +++KLG+
Sbjct: 303 LMQFAT---------SDQ-----IFLLDMITLHSLLHKSDWFLLANALFCNEEMIKLGYG 348
Query: 112 FKQDLIYLSSTF---------CSQGCDIG------FDRVEPYLDIT---SIYNHLHHKQL 153
F DL + T+ + D+ D+ + T S L K
Sbjct: 349 FDSDLKMVVKTYPFLKEPLTHLKRTVDLEKLAAKVIDKAINLMPDTVGDSDDEGLEDKDS 408
Query: 154 GRKL---PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
G + E + L+ + ++ L+K Q SDW RPL Q YAA+DA L+E++
Sbjct: 409 GVNVKFQAVEQRGLSELVRQCFGKPLNKGEQMSDWERRPLRNTQIQYAALDAFVLLEVY 467
>gi|195443106|ref|XP_002069280.1| GK21051 [Drosophila willistoni]
gi|194165365|gb|EDW80266.1| GK21051 [Drosophila willistoni]
Length = 587
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 106 LKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-----KE 160
L +GF DL L + Q + YLD+ +++ L ++ G +LP K
Sbjct: 442 LAIGFSITCDLAMLQRSLPLQ---LRLQTAHHYLDLRTVWLELKKQKYGVELPFGNVNKV 498
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
++L ++ L L+K QCS+W+NRPL EQ YAAIDA CL+ ++NI +V
Sbjct: 499 GEALTDLTLLCLGKKLNKSNQCSNWANRPLRREQILYAAIDARCLMLVYNILIDRV 554
>gi|308501869|ref|XP_003113119.1| CRE-MUT-7 protein [Caenorhabditis remanei]
gi|308265420|gb|EFP09373.1| CRE-MUT-7 protein [Caenorhabditis remanei]
Length = 943
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
VG D+EWKP N +++++QL + D+ L+ +P E
Sbjct: 447 VGFDSEWKPSNLTSINSSKIAIIQLYFK---------DKVYLVDCVQLEEKRLPDERWQE 497
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
++LF S ++ +GF + DL + I + L I SI N K+L
Sbjct: 498 FARQLFGSKNLKIIGFDMRNDLDAI----------IALPALRETLAIDSIQNCFDLKRLA 547
Query: 155 RK----------LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L ++T LA++ + LL +L K QCS+W +RPL + Q YAA+DA
Sbjct: 548 ENICEIDMEILDLKRKTFKLADLTQSLLGQTLDKTEQCSNWQSRPLRKNQLLYAALDAVV 607
Query: 205 LIEIF 209
++ F
Sbjct: 608 VVLTF 612
>gi|118387584|ref|XP_001026896.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89308663|gb|EAS06651.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 567
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 37/206 (17%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSH-QSNFPRVSLLQLACQPGPRFN 68
K+ + + +S +F + L + +GLD E++P + +N ++LLQLA Q
Sbjct: 380 KVFFINNVKSQDFEFAKKELESAKQIGLDGEFRPAVTKLDNNSQSLALLQLATQ------ 433
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKE-LFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
+ FL D ++ +ELL++ +F +P+ILK+G D+ ++S Q
Sbjct: 434 --------NYCFLFDPMALKNEKEYELLQQNIFQNPNILKIGHTISGDISMVASQLNGQ- 484
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKS-LANICKELLDISLSKELQCSDWS 186
+ F + LD+ + HK K P++ +S L+ I K L + Q S+WS
Sbjct: 485 --LNF---KGSLDLAKL-----HK---VKNPEQKQSSLSFIAK----FQLGE--QTSNWS 525
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIF 212
RPL E Q +Y A+DA+ I ++N +
Sbjct: 526 QRPLREAQIHYGALDAYISIALYNKY 551
>gi|301095852|ref|XP_002897025.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108454|gb|EEY66506.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRS-HQSNFPRVSLLQLACQPGPRFNP 69
I+ V S + ++ + + L + ++G D E +P S HQ P +LLQ+A +
Sbjct: 24 IYFVASEK--DWYYCSTRLLNAQVMGFDTETRPIWSKHQRRNP-CALLQIAVR------- 73
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
D + VF+LDL + L +F+S ++KLG F QDL L+ ++ C
Sbjct: 74 --DANQKEEVFILDLLHLSAKVYNTTLTNVFLSKTVVKLGQSFYQDLQELAESYPQASC- 130
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
F + +++ N L G P SL + L L+K Q S+W+ RP
Sbjct: 131 --FTVCKGVVEV----NDLSISLAGAHNPL---SLQKLVFFYLHHKLTKTQQMSNWARRP 181
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LT Q +YAA DA LI +++ +++ ++ +
Sbjct: 182 LTPSQLHYAAADALVLIHLYDELLMRIQKQRTT 214
>gi|17554336|ref|NP_499105.1| Protein MUT-7 [Caenorhabditis elegans]
gi|466063|sp|P34607.1|MUT7_CAEEL RecName: Full=Probable exonuclease mut-7; AltName: Full=Exonuclease
3'-5' domain-containing protein 3 homolog
gi|3881488|emb|CAA80137.1| Protein MUT-7 [Caenorhabditis elegans]
Length = 910
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 39/272 (14%)
Query: 10 KIHLVTSTESPEFTHLARALSQSS------LVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
+IH+V TES E +L + S VG D+EWKP + +++++QL +
Sbjct: 403 QIHMV-KTES-EMNYLCSEIKSLSDEPAPVYVGFDSEWKPSNLTAVHDSKIAIIQLFFK- 459
Query: 64 GPRFNPESDESNASVVFLLD---LSSIPLPSIW--ELLKELFVSPDILKLGFKFKQDLIY 118
+ V+L+D L + W + LF + +GF + DL
Sbjct: 460 -------------NCVWLVDCVELEKANMADDWWQKFASRLFGDSPVKVVGFDMRNDLDA 506
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLS 177
++ T + + + + D+ + ++ + +LPK+T LA++ LL + L
Sbjct: 507 MA-TIPALKSSMKIEDTKNAFDLKRLAENVCDIDMEILELPKKTFKLADLTHYLLGLELD 565
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLG 237
K QCS+W RPL ++Q YAA+DA ++E F V +K + SN+
Sbjct: 566 KTEQCSNWQCRPLRKKQIVYAALDAVVVVETFKKILSIVEEKNKDADIEKIVRESNV--- 622
Query: 238 LKGILEKPDIGNKTVR----FKLCEALDIIRA 265
+ K D G+K+ R E DI+R+
Sbjct: 623 ---MAPKKDKGHKSYRKLKTIPWLELYDILRS 651
>gi|384494557|gb|EIE85048.1| hypothetical protein RO3G_09758 [Rhizopus delemar RA 99-880]
Length = 1413
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 29/180 (16%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LSQS++ G+D EW P + N + +L+Q+A G +FLLDL ++
Sbjct: 1023 LSQSNVCGIDTEWVPAFATLGNPVKTALMQIASDIG------------GYIFLLDLKTL- 1069
Query: 89 LPS--------IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L S + ++L+ LF +ILK+ F F D L + S V LD
Sbjct: 1070 LSSENKMLYKLVEKILQFLFEDEEILKIAFDFTGDFQLLYQSIPSSKSW----NVAKLLD 1125
Query: 141 ITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ S+ + + + G+ + T LA + L +L+K Q S+W RPLTEEQ YA
Sbjct: 1126 LKSLTSPPKPNAENGQPI---TGGLAGVVSTYLGCTLNKRQQISNWEKRPLTEEQAIYAG 1182
>gi|387824213|ref|YP_005823684.1| Ribonuclease D [Francisella cf. novicida 3523]
gi|328675812|gb|AEB28487.1| Ribonuclease D [Francisella cf. novicida 3523]
Length = 364
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + + +S +S + +D E+ R++ +P + L+Q+A +
Sbjct: 6 NKQLNDVIEIISNTSQIAVDTEFYWMRTY---YPELCLVQIATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LK++F + DI K+ D+ + F C++
Sbjct: 49 IFLIDTLKDLDFSK----LKDIFENKDIQKIIHSATNDIPIIKRFF---NCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + KE+LDI + KE Q SDW NRPLT++Q
Sbjct: 95 --------NNIFDTQLAAAFLGFQTQSSLKTLLKEILDIEMEKESQFSDWRNRPLTQKQL 146
Query: 196 NYAAIDAHCLIEI 208
NYA D LI++
Sbjct: 147 NYAIKDVEYLIQL 159
>gi|296221953|ref|XP_002756974.1| PREDICTED: Werner syndrome ATP-dependent helicase [Callithrix
jacchus]
Length = 1433
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGEMVGFDMEWPPVY-NKGKLGKVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ ++E ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DV---KLENFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL KET SL + K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCKETWSLNGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFVIYRKLEI 229
>gi|118379200|ref|XP_001022767.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89304534|gb|EAS02522.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 722
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 23/135 (17%)
Query: 80 FLLDLSSI-PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D+ I I E L ++F+ DI+K+ + +QD+++L F
Sbjct: 75 YLIDVLGINSKQGINECLSKVFLCKDIIKIFYAGQQDILWLKRDF--------------- 119
Query: 139 LDITSIYNHLHHKQLGRKLPK-ETKSLANI----CKELLDISLSKELQCSDWSNRPLTEE 193
D+ S+ N+ K+ L K + SL + C LD KELQ S+WSNRPL++E
Sbjct: 120 -DL-SVVNYFDVKECASFLKKSDDNSLIQLIDRYCNYKLDKQKKKELQVSEWSNRPLSKE 177
Query: 194 QKNYAAIDAHCLIEI 208
Q +YAA+D+H LI+I
Sbjct: 178 QLDYAALDSHYLIKI 192
>gi|432099984|gb|ELK28878.1| Werner syndrome ATP-dependent helicase [Myotis davidii]
Length = 1398
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 33/192 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P S + RV+L+QL ES + + +
Sbjct: 80 ISMSLSDGDVVGFDMEWPPVYS-KGKLSRVALIQLCV----------SESKCYLFHISSM 128
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K+G + D L F DI +++ ++++T +
Sbjct: 129 SVFP-----QGLKMLLENEAIKKVGVGIEGDQWKLLRDF-----DI---KLKSFVELTDV 175
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDA 202
N + ET SL + K L L K ++CS+W N PLTE QK YAA DA
Sbjct: 176 ANE-------KLSSSETWSLNGLVKHLFGKQLLKDKSIRCSNWKNYPLTEVQKLYAATDA 228
Query: 203 HCLIEIFNIFQV 214
+ I+ Q+
Sbjct: 229 YAGFIIYQKLQI 240
>gi|307103312|gb|EFN51573.1| hypothetical protein CHLNCDRAFT_140064 [Chlorella variabilis]
Length = 969
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++GLD EW+P S+ P SLLQ+ S + V+L+DL ++
Sbjct: 427 VLGLDLEWQPD-GENSSPP--SLLQI--------------STDAEVWLVDLLALTGREAG 469
Query: 94 ELLKELFV----SPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
+ L V S + KLG D L+ + F LD+++++ H
Sbjct: 470 DALAAAIVPVLSSDRVYKLGCGIASDFRKLARHHPA-----AFSLARGCLDLSTLWRSCH 524
Query: 150 HKQLGRKLPKETK------SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+Q G++ K SL+ + + +L L K Q SDW RPL+ +Q YAA+DAH
Sbjct: 525 IEQTGKRSTAGYKKRVGEVSLSVLAQSVLGKPLDKSQQVSDWGRRPLSSQQLEYAALDAH 584
Query: 204 CLIEIFN 210
+ IF
Sbjct: 585 AAVLIFR 591
>gi|291386094|ref|XP_002709593.1| PREDICTED: Werner syndrome protein [Oryctolagus cuniculus]
Length = 1416
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPVYT-KGKSSRVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAIKKAGIGIEGDQWKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K LL L K ++CS+WSN PLTE+QK YAA D
Sbjct: 165 ANE--------KLKCAETWSLNGLVKHLLGKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ + I+ ++
Sbjct: 217 AYAGLIIYRKLEI 229
>gi|357610676|gb|EHJ67090.1| hypothetical protein KGM_03049 [Danaus plexippus]
Length = 839
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 5 YRKPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
YR P+ + ++ E F L LS ++ D EWKP S + R++L+Q+
Sbjct: 371 YRLPISEENILIIDTAEKFDELISKLSNCPIISFDCEWKP--SFGAAKSRMALIQIG--- 425
Query: 64 GPRFNPESDESNASVVFLLD---LSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYL 119
V+L+D L++ W K + + +I+KLGF +QDL +
Sbjct: 426 -----------TFDQVYLIDTLILNNKQYMGSWCRFNKYVLDNAEIIKLGFGVEQDLNEM 474
Query: 120 SSTFCSQGCDIGFD--RVEPYLDITSIYNHLHHKQLGRKLPKET----KSLANICKELLD 173
S IG + +V+ + + + G LP + SL+++ +
Sbjct: 475 KSLI------IGLNNIKVKGEGLLDLGLLWKNLVKCGLSLPSNSDNGGNSLSSLVQTCFG 528
Query: 174 ISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ L K QCS+W RPL Q +YAA+DA L+EI+ Q
Sbjct: 529 LPLEKSEQCSNWELRPLRNTQIHYAALDAFVLLEIYKYLQ 568
>gi|406661714|ref|ZP_11069828.1| ribonuclease D [Cecembia lonarensis LW9]
gi|405554465|gb|EKB49550.1| ribonuclease D [Cecembia lonarensis LW9]
Length = 200
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 36/205 (17%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
I LV S + + +A L + SL+G D E +P + + VSLLQLA +
Sbjct: 23 IVLVNSKD--QIKEVALELDRHSLLGFDTETRPSFRKGTQY-YVSLLQLATE-------- 71
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
V FL+ L+ I +P ++E+ P+++K+G DL L I
Sbjct: 72 ------DVAFLIRLNEIGMPGP---IQEILEDPEVIKIGAAVLDDLRGLRK------VSI 116
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
GF+ + + D+ + + +G + N+ +L + +SK Q S+W L
Sbjct: 117 GFEP-QSFFDLNDELKKVGFQNIGVR---------NLAAMVLQMRISKSEQVSNWEAVEL 166
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQVK 215
T+ Q+ YAA DA +EI+ Q +
Sbjct: 167 TDRQQLYAATDAWVCLEIYKKLQYQ 191
>gi|345567854|gb|EGX50756.1| hypothetical protein AOL_s00054g842 [Arthrobotrys oligospora ATCC
24927]
Length = 911
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 43/221 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEW------KPQRSHQSNFPRVSLLQLAC 61
P KIH VT + E +++ +G D EW KP + + S++Q+A
Sbjct: 316 PPKIHYVTDVD--EMETVSKLFENDKAIGFDMEWVPNSILKPTVNDRDIRNCASVIQVA- 372
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPLPS---IWELLKELFVSPDILKLGFKFKQDLIY 118
N V + L+ P + + LK++ P ILK+G K D+
Sbjct: 373 -------------NQERVAIFHLAKFPATTKKFLAPTLKKILEDPSILKMGVSIKGDMTR 419
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ-----LGRKLPKETKSLANICKELLD 173
LS+ + L+++ ++ + + G+ LP SL N+CKE L
Sbjct: 420 LSTLINVNPAGV--------LELSHFHSLVFAAEGNVPAPGKSLP---ASLTNLCKEHLK 468
Query: 174 ISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ L+K +++ S+WS R L ++QK YAA DA+ ++ +
Sbjct: 469 LPLNKGDVRTSNWS-RELNDDQKFYAANDAYASYRVYEAIE 508
>gi|317051081|ref|YP_004112197.1| 3'-5' exonuclease [Desulfurispirillum indicum S5]
gi|316946165|gb|ADU65641.1| 3'-5' exonuclease [Desulfurispirillum indicum S5]
Length = 213
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 37/176 (21%)
Query: 28 ALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
AL Q ++G D E +P R Q P SL+QLA + V+L +S
Sbjct: 46 ALQQCPVLGFDTETRPTFRKGQFFLP--SLIQLATH--------------NHVYLFQISR 89
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
LP+ L E+F S I+K+G D+ L FD + ++DI +
Sbjct: 90 FNLPAG---LLEIFSSQHIVKVGAGLNYDVKQLQQI-------AAFDE-QSFVDIAHLAT 138
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
L KQ G L +C L LSK+ +CSDWS + L+ EQ YAA DA
Sbjct: 139 RLGIKQTG---------LRTLCALLFGKRLSKKARCSDWSRKHLSAEQIKYAAADA 185
>gi|145344201|ref|XP_001416625.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576851|gb|ABO94918.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 614
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 46/204 (22%)
Query: 27 RALSQSSLVGLDAEWKP---QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
R L+ +G+D EW + + + + +V+ LQLA + G V +LD
Sbjct: 407 RYLANKKDIGIDTEWGAAVGEDADKEDTSQVATLQLASEDG--------------VAILD 452
Query: 84 L----SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
L S P ++ + +F +LKLGF ++DL L+ C F V
Sbjct: 453 LPVLVQSCP-EALEATIGRMFQDDKVLKLGFAVQEDLRRLAK--CHPA---SFGNVRNVA 506
Query: 140 DITSIYNHLHHKQLGRKLPKETK----------------SLANICKELLDISLSKELQCS 183
D+ S++ K ++ KET+ L+ + +L L K ++ S
Sbjct: 507 DLQSLWKLAVSKA---RMTKETRDFPWATDEELSRYQPVGLSTMVAAVLGKPLDKTMRMS 563
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIE 207
DWS RPLT +Q+ YAA+DA L+E
Sbjct: 564 DWSKRPLTAQQRVYAALDAWTLVE 587
>gi|320165604|gb|EFW42503.1| hypothetical protein CAOG_07346 [Capsaspora owczarzaki ATCC 30864]
Length = 1153
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 46/212 (21%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
++VG+D EW+P + +LLQLA + L+D + +
Sbjct: 693 TVVGMDTEWRPTVMNSKGSSATALLQLATR--------------DRTILIDTCVLRGAVL 738
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYL----------SSTFCSQGCDIG----------- 131
+ + LF + K+G+ D+ L SS + G
Sbjct: 739 GQFVDRLFSDAAVTKIGYAMTGDMSALQMSCTPDPPPSSATGTAGASGSLPAKIRSARKK 798
Query: 132 ------FDRVEPYLDITSIYNHLHH-KQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
F + +D+ + +H Q G P LA + + +L +L K Q SD
Sbjct: 799 EPRGHHFPAIRSLIDLAQLTSHAGVVAQFGVIAP----GLAGLVRAVLKKTLDKRQQMSD 854
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
W RPL Q +YAA+DA CL+++ ++ +
Sbjct: 855 WERRPLRPAQVHYAALDAFCLLKLHDLMDAAM 886
>gi|353243741|emb|CCA75245.1| related to nucleolar 100K polymyositis-scleroderma protein
[Piriformospora indica DSM 11827]
Length = 847
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 34/197 (17%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L QS + +D E+ S++S + V L+Q+ SN +++D
Sbjct: 254 LKQSEEIAIDLEY---HSYRSYYGFVCLMQV--------------SNRQQDWVVDCLVPE 296
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+ + E+L E+F P+I+K+ + D+++L F +L I ++++
Sbjct: 297 IRANLEILNEVFTDPNIVKVLHGAESDIVWLQENF--------------HLYIVNLFDTF 342
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
H + +LP+ SLA + D + K Q +DW RPL E +YA D H L+ I
Sbjct: 343 HASR-ALELPRH--SLAFLLSAYCDFTADKRYQLADWRIRPLPAEMLHYARSDTHFLLFI 399
Query: 209 FNIFQVKVAQKGNSCSS 225
++ + + +KG + S+
Sbjct: 400 YDQLREALLEKGKNPST 416
>gi|341877604|gb|EGT33539.1| CBN-MUT-7 protein [Caenorhabditis brenneri]
Length = 862
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 49/241 (20%)
Query: 28 ALSQS---SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
ALS+S + VG D+EWKP +N L A +V +++L
Sbjct: 426 ALSKSPDQAYVGFDSEWKP-----TNVTSNKQLFFA-------------DKVWLVDVVEL 467
Query: 85 SSIPLPSIW--ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+ + W + +LF+ +GF + DL + + ++ +L I
Sbjct: 468 GNANVSDDWWQKFAVKLFIDNKFRIIGFDMRNDLDAM----------LTIPALKNFLKIE 517
Query: 143 SIYNHLHHKQLGR----------KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
I N K+L +LPK+T LA++ L+++L K QCS+W RPL +
Sbjct: 518 KINNCFDLKRLAENICDVDMEILELPKKTFKLADLTLHFLNVTLDKTEQCSNWQCRPLRK 577
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTV 252
Q YAA+DA +++ F ++ +S + +++SN+ + K + +KTV
Sbjct: 578 NQIIYAALDAVVVVDTFRKIMEITLERDSSIDMANIVNNSNV------LAPKKEKSSKTV 631
Query: 253 R 253
R
Sbjct: 632 R 632
>gi|118361377|ref|XP_001013917.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89295684|gb|EAR93672.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1490
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 35/219 (15%)
Query: 15 TSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPR--VSLLQLACQPGPRFNPESD 72
T + F + + + S +VG D+E+ Q + F + VS++QLA Q
Sbjct: 379 TKEQKQIFQEVEKTILNSKIVGFDSEFASQ---WNKFEKGGVSIIQLAVQ---------- 425
Query: 73 ESNASVVFLLDLSSIPL----PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+ +++ D ++ + + K LF S I+K G DL + TF S+
Sbjct: 426 ----NKIYIFDALNLLVNKFSQEFFNFCKTLFESKQIIKAGHSISTDLNEMEKTFKSEK- 480
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
FD + ++DI + + T SL + ++LL++ +SK Q S+W R
Sbjct: 481 --KFD-LNNFVDIALLNRDIFSL-------ANTASLKFMVQKLLNLQMSKFEQISNWDRR 530
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSIS 227
PL + Q +YAA+DA +I+++ V++ Q G + + ++
Sbjct: 531 PLRKSQIHYAAVDAFIVIKLYEKL-VQIQQAGGALNYVN 568
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+F L++S L+G D+E+ P R ++ ++ LQLA +N +
Sbjct: 1115 DFKIAVEILTKSKLIGFDSEFIP-RWNKFEKGGIATLQLA-------------TNNKIFI 1160
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
+ + + + LF + +ILK+G QD+ + TF ++ +++ + D
Sbjct: 1161 FDTIKLLENEQFLDFVTYLFENENILKIGHSIWQDINEMDKTFKAKK----EMKIKSFQD 1216
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ IY + + SL +C ++L +SK Q SDWS RPL + Q +YAA+
Sbjct: 1217 VGIIYKEALNLE-------NVSSLKQMCYQILKQKISKYEQISDWSKRPLRKCQIHYAAL 1269
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLD 235
DA + ++ + + LD +N +
Sbjct: 1270 DALLPLMLYEQINLMIENDSLKLLQSQSLDKNNFN 1304
>gi|346466965|gb|AEO33327.1| hypothetical protein [Amblyomma maculatum]
Length = 182
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 79 VFLLDLSSIPL---PSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
VF+LD+ + S W+ L E+ S ILKLG+ +DL ++ T +
Sbjct: 22 VFILDMLRLVAELQSSDWDKLFSEILSSHKILKLGYGIAEDLRLVAETVKQPNA-----K 76
Query: 135 VEPYLDITSIYNHLHHKQLGRKLP----KETKSLANICKELLDISLSKELQCSDWSNRPL 190
V +D+ + L P ++ K LA + L + L+K +CS+W NRPL
Sbjct: 77 VSRVVDLCNFAQKLRQDYPRVIKPVDPRRKCKGLAELTYSTLGLPLNKSERCSNWENRPL 136
Query: 191 TEEQKNYAAIDAHCLIEIF 209
Q YAA+DA+CL++I+
Sbjct: 137 RPSQTVYAALDAYCLLQIY 155
>gi|255693419|ref|ZP_05417094.1| 3'-5' exonuclease domain protein [Bacteroides finegoldii DSM 17565]
gi|423302015|ref|ZP_17280038.1| hypothetical protein HMPREF1057_03179 [Bacteroides finegoldii
CL09T03C10]
gi|260620806|gb|EEX43677.1| 3'-5' exonuclease [Bacteroides finegoldii DSM 17565]
gi|408471106|gb|EKJ89638.1| hypothetical protein HMPREF1057_03179 [Bacteroides finegoldii
CL09T03C10]
Length = 214
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSETETE--KAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +PD++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTRP-----LVDLLENPDVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QNC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q GN
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGN 196
>gi|326432840|gb|EGD78410.1| hypothetical protein PTSG_09106 [Salpingoeca sp. ATCC 50818]
Length = 1063
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 46/189 (24%)
Query: 34 LVGLDAEWKPQRSHQSNFPRV--SLLQLACQPGPRFNPESDESNASVVFLLDL-----SS 86
LVG+D EW+ PRV +++Q+A V+++D +
Sbjct: 905 LVGIDTEWRQ--------PRVACTVMQIAV--------------CDSVWIVDTLIHTKTK 942
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQD---LIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ LL+ LF + LGF FK D +I L S+ P + T
Sbjct: 943 QYAQHVAALLEFLFACEHVHVLGFSFKDDVRHIIPLCPVLASK----------PLVSFTD 992
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ L +QL +K SL+ C+ + L+K QCS+W RPL +Q YAAIDA
Sbjct: 993 V-QQLVRRQLKKK---GQPSLSLACERVFGRPLNKMEQCSNWERRPLRRDQLEYAAIDAW 1048
Query: 204 CLIEIFNIF 212
CLI I++ +
Sbjct: 1049 CLIGIYSHY 1057
>gi|327352334|gb|EGE81191.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 1064
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S + VS++QLA +
Sbjct: 817 KDITVHYCTSLQTSE--RVAQHFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASK--- 871
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
+ + L + ++ P + LK L SP+++K+G + D L
Sbjct: 872 ------ERIAVFHLALFNPANSPQHLVSPTLKRLLESPELVKVGVAIRADCTRLYKFLGL 925
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCS 183
Q ++ +++ ++ + H + + K +LA +E L + L K E++C
Sbjct: 926 QTTNL--------CEVSRLHKVVKHHLNPKLINKRLVNLAEQVEEHLGLPLDKDPEIRCG 977
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
WS + L Q Y A D + +++F++ + K
Sbjct: 978 GWSKK-LNYRQVQYVATDPYAALQLFHVLEAK 1008
>gi|261190752|ref|XP_002621785.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis SLH14081]
gi|239591208|gb|EEQ73789.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis SLH14081]
Length = 1112
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S + VS++QLA +
Sbjct: 817 KDITVHYCTSLQTSE--RVAQHFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASK--- 871
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
+ + L + ++ P + LK L SP+++K+G + D L
Sbjct: 872 ------ERIAVFHLALFNPANSPQHLVSPTLKRLLESPELVKVGVAIRADCTRLYKFLGL 925
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCS 183
Q ++ +++ ++ + H + + K +LA +E L + L K E++C
Sbjct: 926 QTTNL--------CEVSRLHKVVKHHLNPKLINKRLVNLAEQVEEHLGLPLDKDPEIRCG 977
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
WS + L Q Y A D + +++F++ + K
Sbjct: 978 GWSKK-LNYRQVQYVATDPYAALQLFHVLEAK 1008
>gi|313145540|ref|ZP_07807733.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423279805|ref|ZP_17258718.1| hypothetical protein HMPREF1203_02935 [Bacteroides fragilis HMW
610]
gi|424662129|ref|ZP_18099166.1| hypothetical protein HMPREF1205_02515 [Bacteroides fragilis HMW
616]
gi|313134307|gb|EFR51667.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577918|gb|EKA82654.1| hypothetical protein HMPREF1205_02515 [Bacteroides fragilis HMW
616]
gi|404584793|gb|EKA89437.1| hypothetical protein HMPREF1203_02935 [Bacteroides fragilis HMW
610]
Length = 215
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ TES +A SQ+ ++G+D+E +P + + + +V+LLQ++
Sbjct: 21 PGRIHVI-QTESEAEKAVAYLQSQA-ILGIDSETRPSFT-KGHSHKVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P I EL +P+++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQPII-----ELLENPEVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + ++ R + KSL I L +SK + S+W
Sbjct: 121 QAC-------------------IELQEYVRPFGIQDKSLQKIYGILFREKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT+ QK YAA DA + I+++ Q
Sbjct: 162 EADVLTDAQKQYAATDAWACLNIYHLLQ 189
>gi|307170679|gb|EFN62847.1| Exonuclease 3'-5' domain-like-containing protein 2 [Camponotus
floridanus]
Length = 622
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 94/216 (43%), Gaps = 45/216 (20%)
Query: 10 KIHLVTSTESPEF-THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
KI L S E ++ R ++G D EW + VSLLQLA G
Sbjct: 85 KIILADSPEKCDYAVQRIRCNLSDGVLGFDCEWVKEGP-------VSLLQLATYNG---- 133
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
VV L L I + LKEL + ILK+G +D + + GC
Sbjct: 134 ---------VVALFRLGKIGY--VPPKLKELLATKHILKVGVASFEDGQKIVKDY---GC 179
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWS 186
RV LD+ S+ +LH LP KSLA + E L+I + K E++C DW
Sbjct: 180 -----RVSGTLDLRSLAENLH-------LPSR-KSLAAMSLEYLNIEMDKIIEVRCGDWD 226
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
L++EQ YAA DA + I++ K+ QK N+
Sbjct: 227 ASTLSDEQVAYAACDALASVIIYH----KIMQKENA 258
>gi|239614893|gb|EEQ91880.1| 3'-5' exonuclease/helicase [Ajellomyces dermatitidis ER-3]
Length = 1112
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S + VS++QLA +
Sbjct: 817 KDITVHYCTSLQTSE--RVAQHFLSETVVGLDLEWKAQASTRDALVDNVSMIQLASK--- 871
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
+ + L + ++ P + LK L SP+++K+G + D L
Sbjct: 872 ------ERIAVFHLALFNPANSPQHLVSPTLKRLLESPELVKVGVAIRADCTRLYKFLGL 925
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCS 183
Q ++ +++ ++ + H + + K +LA +E L + L K E++C
Sbjct: 926 QTTNL--------CEVSRLHKVVKHHLNPKLINKRLVNLAEQVEEHLGLPLDKDPEIRCG 977
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
WS + L Q Y A D + +++F++ + K
Sbjct: 978 GWSKK-LNYRQVQYVATDPYAALQLFHVLEAK 1008
>gi|350593451|ref|XP_003133429.3| PREDICTED: Werner syndrome ATP-dependent helicase [Sus scrofa]
Length = 1443
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ R++L+QL ES + + +
Sbjct: 69 ISLSLSSGDVVGFDMEWPPVY-NKGKLGRIALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G K D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENEAIKKAGVGIKGDQSKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K ++CS+WSN PLTE+QK YAA D
Sbjct: 165 ANE--------KLKCAETWSLNGLVKHLFSKQLLKDKSIRCSNWSNFPLTEDQKLYAATD 216
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 217 AYAGFIIY 224
>gi|193290152|ref|NP_001123262.1| exonuclease 3'-5' domain-like 2 [Nasonia vitripennis]
Length = 605
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 10 KIHLVTSTESPEF-THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
K+ LV S E ++ R ++G D EW N VSLLQLA G
Sbjct: 61 KVILVDSPEKCDYAVQRIRCNLSDGVLGFDCEW-------VNEEPVSLLQLATHNG---- 109
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V L LS I I LKEL S D+LK+G D ++ + Q
Sbjct: 110 ---------VCALFRLSKIG--HIPPKLKELLSSRDLLKVGVASFDDGRKIAKDYNCQ-- 156
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWS 186
V +D+ + H H LP KSLA +C + LD + K E++CS+W+
Sbjct: 157 ------VVGTVDL-RMLAHRH------SLP-SPKSLAALCVQYLDTEMDKILEVRCSNWN 202
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
LT EQ +YAA DA+ + I++ K+ QK
Sbjct: 203 ADSLTNEQISYAAHDAYAAVLIYHQILQKIVQK 235
>gi|297307109|ref|NP_001137329.2| Werner syndrome ATP-dependent helicase [Bos taurus]
Length = 1404
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPFK--KGTLSRVALIQLCVA----------ESKCYLFHISSM 114
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 115 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 161
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CSDWS PLTE+QK YAA D
Sbjct: 162 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSIRCSDWSRFPLTEDQKVYAATD 213
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 214 AYAGFIIY 221
>gi|395847404|ref|XP_003796366.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Otolemur garnettii]
Length = 1432
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ + LS +VG D EW P + RV+L+QL ES + + +
Sbjct: 68 IGKTLSDGDVVGFDLEWPPV-FRKGKHGRVALIQLCV----------SESKCYLFHISAM 116
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F D+ +++ ++++T +
Sbjct: 117 SVFP-----QGLKMLLENETVKKAGVGIQGDEWKLLRDF-----DV---KLKSFVELTDV 163
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL + K L L K ++CSDWSN PLTE+QK YAA D
Sbjct: 164 AN--------KKLKCIETWSLNGLVKHLFGKQLLKDKSVRCSDWSNYPLTEDQKLYAATD 215
Query: 202 AHCLIEIF 209
A+ + I+
Sbjct: 216 AYAGLIIY 223
>gi|149186862|ref|ZP_01865172.1| ribonuclease D [Erythrobacter sp. SD-21]
gi|148829529|gb|EDL47970.1| ribonuclease D [Erythrobacter sp. SD-21]
Length = 411
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 48/281 (17%)
Query: 9 LKIH-LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
+KIH L+T T++ + L++S V +D E+ + ++ +P + L+Q+A
Sbjct: 2 MKIHDLITDTDT--LAAMCERLAKSDFVTVDTEFMRENTY---WPELCLVQIA------- 49
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
++E A++ L D I L +W+LL + + ++LK+ QD + + F +
Sbjct: 50 ---NEEEAAAIDPLAD--GIDLQPLWDLLCD---NEEVLKVFHAGGQD-VEIVYNFTGKT 100
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
FD + I+ ++Q+G AN+ + + I++ K + +DW
Sbjct: 101 PHPIFDTQIAMMAIS------QNEQIG---------YANLVESWMGITVDKGARFTDWGR 145
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD--------SSNLDLGLK 239
RPLT+ Q YA D L +IF + K+ + G +E+D ++N DL K
Sbjct: 146 RPLTDRQIEYAIGDVTHLSKIFPMILKKLIKTGRGVWLDAEMDKLADPANYANNADLAWK 205
Query: 240 GILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSR 280
I + N TV +L +AL R + + +P G + R
Sbjct: 206 RI--RSPGRNPTVLGRL-KALAAWRESEAQHKDIPRGRIMR 243
>gi|385304629|gb|EIF48639.1| putative nuclear exosome component rrp6p [Dekkera bruxellensis
AWRI1499]
Length = 607
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L + ++G+D E R++ SL+Q++ G + ++D
Sbjct: 207 LLSELEKCKVIGVDLEHHDYRTYHG---LTSLMQISTDTGKDY-------------IVDP 250
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S L LL +F +PDI+K+ D+++L D+G L + S+
Sbjct: 251 LSAQLRPHLSLLNIVFTNPDIIKVFHGAFMDMMWLQR-------DLG-------LYVVSL 296
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ ++L SLA + ++ + SK+ Q +DW RPL E +NYA D H
Sbjct: 297 FDTY---WAAKELTLGKYSLAFLLEKYIHFRTSKKWQLADWRIRPLGPEMRNYAKADTHF 353
Query: 205 LIEIFNIFQVKVAQKGNSCSSI 226
LIE+F Q ++ K + +
Sbjct: 354 LIELFGKIQXELIXKPGAMKRV 375
>gi|338720942|ref|XP_001915839.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase-like [Equus caballus]
Length = 1405
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 39/209 (18%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
+V S E+ + + L+ +LS +VG D EW P ++ RV+L+QL
Sbjct: 53 IVYSYEASDCSFLSEDISLSLSDGDVVGFDMEWPPIY-NKRKLDRVALIQLCVS------ 105
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P + LK L + I K+G + D L F
Sbjct: 106 ----ESKCYLFHISSMSVFP-----QGLKMLLXNKAIKKVGVGIEGDQWXLLRDF----- 151
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDW 185
DI +++ ++++T + N KL E SL + K L L K ++CSDW
Sbjct: 152 DI---KLKSFVELTDVANE--------KLKCAEIWSLNGLVKHLFGKQLLKDKSVRCSDW 200
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
+N PLTE+QK YAA DA+ I+ ++
Sbjct: 201 NNFPLTEDQKLYAATDAYAGFIIYRKLEI 229
>gi|320583859|gb|EFW98072.1| hypothetical protein HPODL_0702 [Ogataea parapolymorpha DL-1]
Length = 729
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L +F P+I+K+ D+I+L D+G L + S+++ H R
Sbjct: 286 LNVIFTDPNIVKVFHGAFMDIIWLQR-------DLG-------LYVVSLFDTYH---ASR 328
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+L SLA++ + + SK+ Q +DW RPL E KNYA D H LIE+F +
Sbjct: 329 ELGLGRHSLAHLLETYVKFKTSKKWQLADWRMRPLNSEMKNYAKADTHFLIEVFYKMHSE 388
Query: 216 VAQKGNSCSSI 226
+ Q + +
Sbjct: 389 LVQNPDKLKKV 399
>gi|302673415|ref|XP_003026394.1| hypothetical protein SCHCODRAFT_114457 [Schizophyllum commune H4-8]
gi|300100076|gb|EFI91491.1| hypothetical protein SCHCODRAFT_114457, partial [Schizophyllum
commune H4-8]
Length = 357
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 39/196 (19%)
Query: 30 SQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE------SNASVVFLLD 83
S ++V D E+K ++ S ++L P P + S + VV D
Sbjct: 48 SNFAIVAFDVEYKGRKHSDSE------MRLLPVPLPLSHRRSHFLRLLTIARDGVVIAFD 101
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
L + L +I L E+F P I+K+G + K D I + F +
Sbjct: 102 L--VALGAIPGRLIEIFADPTIIKVGIELKSDCILILRHFA-----------------VA 142
Query: 144 IYNHLHHKQLGRKLPKETK--------SLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
+YN QL + + + SL ++ + + + + KE+Q SDW LTEEQ
Sbjct: 143 VYNGWELSQLWKSMHPSIEAGPLTSHISLDDMARITVGVRIMKEMQRSDWGTSVLTEEQI 202
Query: 196 NYAAIDAHCLIEIFNI 211
+YA IDA+ LI + ++
Sbjct: 203 DYALIDAYMLIPMIHV 218
>gi|109504268|ref|XP_001059940.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform 1
[Rattus norvegicus]
gi|392354016|ref|XP_002728460.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Rattus
norvegicus]
Length = 1400
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 35/189 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P Q RV+++QL ES + + +
Sbjct: 63 ISMHLSDGDVVGFDMEWPPIYK-QGKRSRVAVIQLCV----------SESKCYLFHISSM 111
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ ++E ++++T +
Sbjct: 112 SVFP-----QGLKMLLENKSIRKAGVGIEGDQWKLLRDF-----DV---KLESFVELTDV 158
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N RKL ET SL + K +L L K ++CS+WS+ PL+E+QK YAA D
Sbjct: 159 AN--------RKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATD 210
Query: 202 AHCLIEIFN 210
A+ + I+
Sbjct: 211 AYAGLIIYQ 219
>gi|406894045|gb|EKD38950.1| hypothetical protein ACD_75C00553G0006 [uncultured bacterium]
Length = 378
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
K++ + TE+ E L R Q+ V LD E+ +R++ +P++ L+Q+A
Sbjct: 3 KLNTLIQTEA-ELDILVRRAKQTDAVALDTEFVWERTY---YPQLGLIQIAL-------- 50
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
SDE +L+D ++ + L +L ++K+ QDL L + +
Sbjct: 51 -SDED----CYLIDPVAV---KNLQALGQLLSDRGVVKILHDAPQDLAILQRATGATPQN 102
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
I R+ LP T SL N+ KELLDI LSKE ++W RP
Sbjct: 103 IFDTRLAAGFS---------------NLPA-TLSLGNLVKELLDIELSKEETRTNWLQRP 146
Query: 190 LTEEQKNYAAIDAHCL 205
LTEEQ YA D L
Sbjct: 147 LTEEQVRYALDDVRYL 162
>gi|149057893|gb|EDM09136.1| rCG43045, isoform CRA_b [Rattus norvegicus]
Length = 1335
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P Q RV+++QL ES + + +
Sbjct: 63 ISMHLSDGDVVGFDMEWPPIYK-QGKRSRVAVIQLCV----------SESKCYLFHISSM 111
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ ++E ++++T +
Sbjct: 112 SVFP-----QGLKMLLENKSIRKAGVGIEGDQWKLLRDF-----DV---KLESFVELTDV 158
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N RKL ET SL + K +L L K ++CS+WS+ PL+E+QK YAA D
Sbjct: 159 AN--------RKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATD 210
Query: 202 AHCLIEIF 209
A+ + I+
Sbjct: 211 AYAGLIIY 218
>gi|405977154|gb|EKC41618.1| Exonuclease 3'-5' domain-containing protein 2 [Crassostrea gigas]
Length = 860
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 6 RKPLKIHLVTSTES-PEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
R+ K+H++ S E EF H R L Q+ ++GLD EW SH VSLLQ+A
Sbjct: 283 REKKKVHVIESPEIWEEFCH--RILKQNIKVIGLDCEWV---SHGKRALPVSLLQVATPK 337
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
G + +V L +S +P E L ++ ILK+G D L +
Sbjct: 338 G----------DCGLVRLSKMSEVP-----ESLHQIMQDRSILKVGVAVVDDGKKLGRDY 382
Query: 124 --CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE-- 179
QGC D + I+N +T+SL I KE+LD+ + K+
Sbjct: 383 GITVQGC---VDLRYVLARVRGIFN------------VKTESLREITKEVLDVVIEKDAA 427
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
++ +W TE Q +YAA DA ++IF
Sbjct: 428 VRRGNWEAETYTEAQIDYAAKDALVGVDIFT 458
>gi|296472378|tpg|DAA14493.1| TPA: Werner syndrome [Bos taurus]
Length = 744
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 36/189 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPFK--KGTLSRVALIQLCVA----------ESKCYLFHISSM 114
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 115 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 161
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CSDWS PLTE+QK YAA D
Sbjct: 162 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSIRCSDWSRFPLTEDQKVYAATD 213
Query: 202 AHCLIEIFN 210
A+ I+
Sbjct: 214 AYAGFIIYQ 222
>gi|403357653|gb|EJY78455.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 678
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
V + E L L Q +G+D+EW+PQ + N SL Q+
Sbjct: 339 VQMISTEEDIDLLDNLFQDKYIGVDSEWRPQLTKFHN-TAPSLFQI-------------- 383
Query: 74 SNASVVFLLDLSSIPLPSIWEL-LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
S A +L+D S+ + + L +LF + +GF F D+ F + ++ F
Sbjct: 384 SGAKSAYLIDFVSLKHSAYLDKKLSDLFSHEAVCIVGFSFNSDV----EQFARKFPNLKF 439
Query: 133 DR-VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
R ++ ++D ++ + L LA + +++ + K Q S+W RPL
Sbjct: 440 YRFIKNFIDAQYYFSVV-------TLSPPMTGLAKVSEKVFGKPICKREQMSNWERRPLR 492
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
Q++Y A+DA L+++ N K+A+ G+ +SI +
Sbjct: 493 LSQQHYGALDAFILVDLIN----KLAEDGHPKNSIDK 525
>gi|240254568|ref|NP_850189.5| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253588|gb|AEC08682.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 891
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDF------------- 210
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + ++++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 211 -HIYVVNMFDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS 225
YA DAH L+ I + ++ Q SS
Sbjct: 267 YARTDAHYLLYIADSLTTELKQLATDSSS 295
>gi|170590466|ref|XP_001899993.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158592625|gb|EDP31223.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 331
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 28 ALSQSSLVGLDAEWKP-----------------QRSHQSNFPRVSLLQLACQPGPRFNPE 70
+ ++ L+G+D EWKP + S + +V+L Q+ Q
Sbjct: 34 VIEEADLIGIDTEWKPLFICTNERLKTFLEIARKVSVGLSLLQVALFQICVQHC------ 87
Query: 71 SDESNASVVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------ 123
+ +V ++ L ++ W K LF +KLGF F DL L +++
Sbjct: 88 -----SYLVDVITLENVLTEEQWTRFFKALFCDSTAIKLGFDFLNDLKVLRASYPYLQPL 142
Query: 124 -------CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS--LANICKE 170
C P +LD + N + L + ET L ++C++
Sbjct: 143 EEMKNVVCILKLVKSLLASNPAFLDFSDSINLPLSSETENLLDIVSDETVHFRLTDLCRK 202
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
+L +L K Q +W+ RPL EQ YAA+D +CL+ ++N +++ + N
Sbjct: 203 VLGQALDKTEQIGNWAMRPLRREQMKYAAMDGYCLLNLYNKLKIRAERDYN 253
>gi|296472380|tpg|DAA14495.1| TPA: Werner syndrome [Bos taurus]
Length = 707
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 36/189 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPFK--KGTLSRVALIQLCVA----------ESKCYLFHISSM 114
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 115 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 161
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CSDWS PLTE+QK YAA D
Sbjct: 162 AN--------EKLKCIETWSLNGLVKYLFGKQLLKDRSIRCSDWSRFPLTEDQKVYAATD 213
Query: 202 AHCLIEIFN 210
A+ I+
Sbjct: 214 AYAGFIIYQ 222
>gi|390368374|ref|XP_003731440.1| PREDICTED: exosome component 10-like, partial [Strongylocentrotus
purpuratus]
Length = 776
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L+R+L QS + +D E S++S L+Q+ S A +++D
Sbjct: 130 LSRSLKQSKEIAVDLE---HHSYRSYLGFTCLMQI--------------STAEHDYVVD- 171
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
++ L S ++L + F P I+K+ G ++ FD ++ L + +
Sbjct: 172 -TLELRSELQMLNDAFTDPKIVKV----------------FHGANMDFDWLQRDLGLY-V 213
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N Q R L SLA++ + K+ Q +DW RPL EE +YA D H
Sbjct: 214 VNMFDTHQASRSLGFPHHSLASLLSRYCQVEADKQYQLADWRIRPLPEEMLHYAREDTHY 273
Query: 205 LIEIFNIFQVKVAQKGN 221
L+ I++ + ++ ++GN
Sbjct: 274 LLYIYHTMKNELIKRGN 290
>gi|334184634|ref|NP_001189656.1| RRP6-like protein 3 [Arabidopsis thaliana]
gi|330253589|gb|AEC08683.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 872
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDF------------- 210
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + ++++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 211 -HIYVVNMFDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS 225
YA DAH L+ I + ++ Q SS
Sbjct: 267 YARTDAHYLLYIADSLTTELKQLATDSSS 295
>gi|406862035|gb|EKD15087.1| putative exosome complex exonuclease Rrp6 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 804
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L ++S + +D E QRS+ VSL+Q++ + E D +++D + P
Sbjct: 259 LKEASEIAIDLEHHDQRSYVG---LVSLMQISTR-------EKD-------WIVD-TLKP 300
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
++L E+F P I+K+ D+++L D+G L + +++
Sbjct: 301 WRQNLQVLNEVFADPKIIKVFHGAFMDIVWLQR-------DLG-------LYVVGLFD-T 345
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
HH R L SLA + K+ +D K+ Q +DW RPL E YA D H L+ I
Sbjct: 346 HHA--SRALGYSGASLAFLLKKFIDFDADKQYQMADWRIRPLPAEMFFYARADTHFLLYI 403
Query: 209 FNIFQVKVAQKGNS 222
F++ + ++ + NS
Sbjct: 404 FDMVRNELIDRSNS 417
>gi|410100003|ref|ZP_11294968.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
gi|409216558|gb|EKN09542.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
Length = 194
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L+Q VG D E +P + + ++SL+Q++ +DE+ FL L+ I
Sbjct: 42 LTQFEAVGFDTETRPSFKKGTRY-KISLMQIS----------TDEA----CFLFRLNRIG 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+P + L++ V+ ILK+G + D F + DI N L
Sbjct: 87 IP---QSLEDFLVNDKILKIGLSLRDD----------------FGAMRKRTDIKPA-NFL 126
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + E SL I L D +SK + S+W LTE+QK YAA+DA ++I
Sbjct: 127 DLQNYVGQFGIEDASLQKIYAILFDKKISKGQRLSNWEADVLTEQQKKYAALDAWACLKI 186
Query: 209 FN 210
+N
Sbjct: 187 YN 188
>gi|402080291|gb|EJT75436.1| exosome complex exonuclease Rrp [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 834
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 20/138 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L ++F P ILK+ D+I+L D+G L + +++ H +
Sbjct: 295 EVLNQVFADPKILKVFHGAFMDIIWLQR-------DLG-------LYVVGLFDTFHAAEA 340
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L +KSLA + K+ D K Q +DW RPL++E YA D H L+ ++++ +
Sbjct: 341 ---LLYPSKSLAYLLKKFADFEADKRFQMADWRIRPLSKEMLYYARSDTHYLLYVYDMMR 397
Query: 214 ---VKVAQKGNSCSSISE 228
VK +++G+ + E
Sbjct: 398 NELVKQSRRGDPDGDLVE 415
>gi|434408338|ref|YP_007151402.1| DNA-directed DNA polymerase [Stanieria cyanosphaera PCC 7437]
gi|428272091|gb|AFZ38031.1| DNA-directed DNA polymerase [Stanieria cyanosphaera PCC 7437]
Length = 641
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 10 KIHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
K HLVT+ E + L L + G+D E H S +V L+Q+A P
Sbjct: 56 KYHLVTNVE--QLRKLLDPLIDTIEKFGIDTETTGLDPHTS---KVRLVQIAVLKHP--- 107
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V ++DL++I + L K+L S + LK+G K DL+ L ST
Sbjct: 108 ----------VLVIDLAAIDQTGLTPL-KQLLAS-NCLKIGHNLKFDLMMLKST------ 149
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
GF+ PY D +L +K L L K + +L + ++LL + L+K Q SD+S R
Sbjct: 150 --GFNLEPPYFD-----TYLEYKVLTAGL-KRSNTLETLVQKLLRVKLNKSAQTSDFS-R 200
Query: 189 PLTEEQKNYAAIDAHCLI 206
L +EQ YAA DA L+
Sbjct: 201 SLGKEQLQYAANDAAVLL 218
>gi|354474937|ref|XP_003499686.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Cricetulus griseus]
gi|344242328|gb|EGV98431.1| Werner syndrome ATP-dependent helicase-like [Cricetulus griseus]
Length = 1405
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 13 LVTSTESPEFTHLARALSQ----SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
+V S E+ + + L+ +S +++G D EW P H RV+++QL
Sbjct: 53 IVYSYEASDCSFLSEDISMRLPDGAVIGFDMEWPPIYKHGKR-NRVAVIQLCM------- 104
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P + LK L + I K G + D L F
Sbjct: 105 ---SESKCYLFHISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF----- 151
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDW 185
+I ++E ++++T I N KL ET SL + K +L L K ++CS+W
Sbjct: 152 EI---KLESFVELTDIAN--------EKLKCAETWSLNGLVKHILGKQLLKDKSIRCSNW 200
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SN PLT++QK YAA DA+ + I+ K+A G++
Sbjct: 201 SNFPLTDDQKLYAATDAYAGLAIYE----KLANLGDT 233
>gi|355697852|gb|EHH28400.1| Werner syndrome ATP-dependent helicase [Macaca mulatta]
Length = 1431
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 35/190 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+LS +VG D EW P ++ +V+L+QL ES + + +S
Sbjct: 72 SLSDGDVVGFDMEWPP-LYNKGKLGKVALIQLCV----------SESKCYLFHISSMSVF 120
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + LK L + I K G + D L F DI +++ ++++T + N
Sbjct: 121 P-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDVAN- 166
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+KL ET SL+ + K LL L K ++CS+WS PLTE+QK YAA DA+
Sbjct: 167 -------KKLKCTETWSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYA 219
Query: 205 LIEIFNIFQV 214
I+ ++
Sbjct: 220 GFIIYRNLEI 229
>gi|109086093|ref|XP_001085031.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Macaca
mulatta]
Length = 1432
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 35/190 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+LS +VG D EW P ++ +V+L+QL ES + + +S
Sbjct: 72 SLSDGDVVGFDMEWPP-LYNKGKLGKVALIQLCV----------SESKCYLFHISSMSVF 120
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + LK L + I K G + D L F DI +++ ++++T + N
Sbjct: 121 P-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDVAN- 166
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+KL ET SL+ + K LL L K ++CS+WS PLTE+QK YAA DA+
Sbjct: 167 -------KKLKCTETWSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYA 219
Query: 205 LIEIFNIFQV 214
I+ ++
Sbjct: 220 GFIIYRNLEI 229
>gi|160892403|gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]
Length = 892
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 44/235 (18%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDF------------- 210
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ + ++++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 211 -HIYVVNMFDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKT 251
YA DAH L+ I + ++ Q ++ DSS+ D +LE N T
Sbjct: 267 YARTDAHYLLYIADSLTTELKQ-------LATEDSSSPDDRFHFLLEASRRSNMT 314
>gi|224538568|ref|ZP_03679107.1| hypothetical protein BACCELL_03462 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221874|ref|ZP_17208344.1| hypothetical protein HMPREF1062_00530 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224519812|gb|EEF88917.1| hypothetical protein BACCELL_03462 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645292|gb|EIY39021.1| hypothetical protein HMPREF1062_00530 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 215
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IHLV + E L + SL+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIHLVQTPWEAE--KAVTYLKKYSLLGIDSETRPSFTKGQSH-KVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L SP + K+G + D + L + F
Sbjct: 73 -------EDCFLFRLNLTGLTLPII-----SLLESPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C ++ Y+ + I + KSL I L +SK + S+W
Sbjct: 121 HSCI----ELQEYVRMFGI---------------QDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAEHLTEPQKQYAATDAWACLNIYNRLQ 189
>gi|424841170|ref|ZP_18265795.1| ribonuclease D [Saprospira grandis DSM 2844]
gi|395319368|gb|EJF52289.1| ribonuclease D [Saprospira grandis DSM 2844]
Length = 194
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 12 HLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPES 71
++T + AL+Q ++G D E KP +P VSL+QLA P+
Sbjct: 23 EIITVETEEQLEEALLALNQCKILGFDTESKPSFRKGEYYP-VSLIQLAM-------PDK 74
Query: 72 DESNASVVFLL-DLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST--FCSQGC 128
VFL+ +L S + LK LF +P I+K G + D+ L F ++G
Sbjct: 75 -------VFLIRNLKS----GFSDGLKALFENPKIVKAGPALRDDIRDLQRLRPFTAKG- 122
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ DI I +Q+G + N+ L +SK Q S+W
Sbjct: 123 ---------FKDIADIAKANGIQQMGAR---------NLTAIFLGKRISKSQQTSNWERE 164
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQ 213
PL++ Q YAA DA+ ++I+ +F+
Sbjct: 165 PLSQAQNFYAATDAYLGLKIYTLFE 189
>gi|426225953|ref|XP_004007122.1| PREDICTED: probable exonuclease mut-7 homolog [Ovis aries]
Length = 764
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 87/218 (39%), Gaps = 63/218 (28%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
DC YR P+ IH + S E H L +VG+D EW+P PRVSL+Q
Sbjct: 321 DC-YRLPIAREDIHFLASWEE-LARHEDTLLQVCQVVGVDLEWRPSFG-AGGRPRVSLMQ 377
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPLPS-------IWELLKELFVSPDILKLGFK 111
+A + VFLLDL + P+ +L+ L P I KLG+
Sbjct: 378 VAVE--------------GRVFLLDLPQLSNPAGGQAPRAFSQLVSRLLSDPSITKLGYG 423
Query: 112 FKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKEL 171
DL L +++ P L Q G++L +
Sbjct: 424 MAGDLRSLGASY-------------PAL-----------AQAGQQL-----------QGG 448
Query: 172 LDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
LD+ L Q RPL E Q YAA DA+CL+E+F
Sbjct: 449 LDL-LQVHRQXXXXXXRPLGEGQLVYAAADAYCLLEVF 485
>gi|322801849|gb|EFZ22421.1| hypothetical protein SINV_07950 [Solenopsis invicta]
Length = 612
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
++G D EW + VSLLQLA +N VV L + I I
Sbjct: 99 GILGFDCEWVKEGP-------VSLLQLA-------------TNNGVVALFRIGKIGY--I 136
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
LKEL + ILK+G +D L + GC RV LD+ ++ + L+
Sbjct: 137 PFKLKELLATKHILKVGVSSFEDGQKLVKDY---GC-----RVNGTLDLRTLADSLN--- 185
Query: 153 LGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
LP KSLA +C++ L+I + K E++C DW L+++Q YAA DA + I++
Sbjct: 186 ----LPSR-KSLAAMCEQYLNIEMDKLIEVRCGDWDASTLSDDQVAYAACDALASVIIYH 240
Query: 211 IFQVKVAQK 219
K +K
Sbjct: 241 KIMEKNKEK 249
>gi|153807650|ref|ZP_01960318.1| hypothetical protein BACCAC_01932 [Bacteroides caccae ATCC 43185]
gi|423217361|ref|ZP_17203857.1| hypothetical protein HMPREF1061_00630 [Bacteroides caccae
CL03T12C61]
gi|149130012|gb|EDM21224.1| 3'-5' exonuclease [Bacteroides caccae ATCC 43185]
gi|392628520|gb|EIY22546.1| hypothetical protein HMPREF1061_00630 [Bacteroides caccae
CL03T12C61]
Length = 214
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ S ES +A LSQ ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIHVIQS-ESETEKAVAYLLSQP-ILGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P I+K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPGIIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C D V R+ + KSL I L +SK + S+W
Sbjct: 121 QSCIELQDYV-------------------RQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ + GN
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKRTGN 196
>gi|402877950|ref|XP_003902671.1| PREDICTED: Werner syndrome ATP-dependent helicase [Papio anubis]
Length = 1373
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 35/190 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+LS +VG D EW P ++ +V+L+QL ES + + +S
Sbjct: 72 SLSDGDVVGFDMEWPP-LYNKGKLGKVALIQLCV----------SESKCYLFHISSMSVF 120
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
P + LK L + I K G + D L F DI +++ ++++T + N
Sbjct: 121 P-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDVAN- 166
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+KL ET SL+ + K LL L K ++CS+WS PLTE+QK YAA DA+
Sbjct: 167 -------KKLKCTETWSLSGLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYA 219
Query: 205 LIEIFNIFQV 214
I+ ++
Sbjct: 220 GFIIYRNLEI 229
>gi|296171911|ref|ZP_06852975.1| ribonuclease D [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295893910|gb|EFG73681.1| ribonuclease D [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 430
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL EE NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGSGLAKGHGAADWSKRPLPEEWLNYAALDVELLIELRGAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+AQ+G + + E D
Sbjct: 200 DVLAQQGKTGWAAEEFD 216
>gi|402220892|gb|EJU00962.1| ribonuclease H-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 338
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
SS +G D EW+P SL+QL DE N ++ + + P
Sbjct: 85 SSPLGFDTEWRPNYVKGGRENWTSLIQLG-----------DEHNILLIQISAMQYFP--- 130
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
E L+EL +P I+K+G + D L E L+ +S+ +
Sbjct: 131 --ESLRELLSNPAIVKVGVGIRGDAFKLHR--------------EQQLEFSSLLDLADFA 174
Query: 152 QL---GRKLPKETKSLANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
+L + P LA +C+ L+ +L K ++ S+W P+T+ ++YAA DAH +
Sbjct: 175 KLVDPDKWAPNRNPGLAALCETYLERTLKKGKITKSNWEMNPMTKAMQDYAANDAHVSFK 234
Query: 208 IFNIFQ 213
IF +
Sbjct: 235 IFRFLE 240
>gi|357116782|ref|XP_003560156.1| PREDICTED: uncharacterized protein LOC100837522 [Brachypodium
distachyon]
Length = 909
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLA+ LS + +D E Q S +S +L+Q++ Q +
Sbjct: 152 QLEHLAKLLSDEEVFAVDTE---QHSLRSFLGYTALVQISTQKED--------------Y 194
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L +L+ +F SP I K+ D+++L F ++
Sbjct: 195 LID--TIALHDAMGILRPVFSSPSICKIFHGADNDVLWLQRDF--------------HIY 238
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ +I++ ++ L K KSLA + + ++ K +Q DW RPLT E YA
Sbjct: 239 VVNIFDTAKACEV---LSKPQKSLAYLLEIYCGVTTDKTMQREDWRVRPLTPEMVEYARS 295
Query: 201 DAHCLIEIFNIFQVKVAQKG 220
DAH L++I N ++ K
Sbjct: 296 DAHYLLKIANCLASELHAKA 315
>gi|393786954|ref|ZP_10375086.1| hypothetical protein HMPREF1068_01366 [Bacteroides nordii
CL02T12C05]
gi|392658189|gb|EIY51819.1| hypothetical protein HMPREF1068_01366 [Bacteroides nordii
CL02T12C05]
Length = 215
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IH++ S + E L S++G+D+E +P + + +V+LLQ++
Sbjct: 24 IHVIQSEK--EADKAVAYLQAQSVLGIDSETRPSFTKGQSH-KVALLQISS--------- 71
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGC 128
+ +F L+++ + PS+ LL+ +P+++K+G + D + L + F QGC
Sbjct: 72 ---NECCFLFRLNMTGLT-PSLIGLLE----NPEVIKVGLSLRDDFMMLHKRAPFTQQGC 123
Query: 129 DIGFDRVEPY--LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
D V P+ LD KSL I L +SK + S+W
Sbjct: 124 VELQDYVRPFGILD---------------------KSLQKIYGILFKEKISKSQRLSNWE 162
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
LT+ QK YAA DA + I+N+ + ++ GN
Sbjct: 163 ADVLTDAQKQYAATDAWACLHIYNLLE-ELKHTGN 196
>gi|53712323|ref|YP_098315.1| hypothetical protein BF1031 [Bacteroides fragilis YCH46]
gi|60680496|ref|YP_210640.1| 3'-5' exonuclease [Bacteroides fragilis NCTC 9343]
gi|336408541|ref|ZP_08589032.1| hypothetical protein HMPREF1018_01047 [Bacteroides sp. 2_1_56FAA]
gi|375357352|ref|YP_005110124.1| putative 3'-5' exonuclease [Bacteroides fragilis 638R]
gi|383117263|ref|ZP_09938009.1| hypothetical protein BSHG_0617 [Bacteroides sp. 3_2_5]
gi|423248984|ref|ZP_17230000.1| hypothetical protein HMPREF1066_01010 [Bacteroides fragilis
CL03T00C08]
gi|423256706|ref|ZP_17237634.1| hypothetical protein HMPREF1067_04278 [Bacteroides fragilis
CL03T12C07]
gi|423258685|ref|ZP_17239608.1| hypothetical protein HMPREF1055_01885 [Bacteroides fragilis
CL07T00C01]
gi|423264343|ref|ZP_17243346.1| hypothetical protein HMPREF1056_01033 [Bacteroides fragilis
CL07T12C05]
gi|423269089|ref|ZP_17248061.1| hypothetical protein HMPREF1079_01143 [Bacteroides fragilis
CL05T00C42]
gi|423273350|ref|ZP_17252297.1| hypothetical protein HMPREF1080_00950 [Bacteroides fragilis
CL05T12C13]
gi|423281785|ref|ZP_17260670.1| hypothetical protein HMPREF1204_00208 [Bacteroides fragilis HMW
615]
gi|52215188|dbj|BAD47781.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60491930|emb|CAH06690.1| putative 3'-5' exonuclease [Bacteroides fragilis NCTC 9343]
gi|251947416|gb|EES87698.1| hypothetical protein BSHG_0617 [Bacteroides sp. 3_2_5]
gi|301162033|emb|CBW21577.1| putative 3'-5' exonuclease [Bacteroides fragilis 638R]
gi|335935762|gb|EGM97710.1| hypothetical protein HMPREF1018_01047 [Bacteroides sp. 2_1_56FAA]
gi|387776265|gb|EIK38365.1| hypothetical protein HMPREF1055_01885 [Bacteroides fragilis
CL07T00C01]
gi|392648705|gb|EIY42393.1| hypothetical protein HMPREF1067_04278 [Bacteroides fragilis
CL03T12C07]
gi|392656531|gb|EIY50169.1| hypothetical protein HMPREF1066_01010 [Bacteroides fragilis
CL03T00C08]
gi|392702398|gb|EIY95544.1| hypothetical protein HMPREF1079_01143 [Bacteroides fragilis
CL05T00C42]
gi|392706609|gb|EIY99732.1| hypothetical protein HMPREF1056_01033 [Bacteroides fragilis
CL07T12C05]
gi|392707951|gb|EIZ01064.1| hypothetical protein HMPREF1080_00950 [Bacteroides fragilis
CL05T12C13]
gi|404582826|gb|EKA87517.1| hypothetical protein HMPREF1204_00208 [Bacteroides fragilis HMW
615]
Length = 216
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ TES +A SQ+ ++G+D+E +P + + + +V+LLQ++
Sbjct: 21 PGRIHVI-QTESEAQKAVAYLQSQA-ILGIDSETRPSFT-KGHSHKVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P I EL P ++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQPII-----ELLEDPKVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + V P+ + KSL I L +SK + S+W
Sbjct: 121 QACIELQEYVRPF-------------------GIQDKSLQKIYGILFSEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
LT+ QK YAA DA + I+++ + ++ + GN
Sbjct: 162 EADVLTDAQKQYAATDAWACLNIYHLLE-ELKRTGN 196
>gi|37526051|ref|NP_929395.1| ribonuclease D [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36785481|emb|CAE14428.1| Ribonuclease D (RNase D) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 375
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
T + + + S V LD E+ R++ +P++ L+QL D
Sbjct: 7 TTDAQLQQVCEGAKKYSKVALDTEFVRTRTY---YPQLGLIQL-----------YDGEQL 52
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGFDRV 135
S++ L++++ W+ +EL P ILKL +DL ++L++ C
Sbjct: 53 SLIDPLNITN------WQPFRELITHPQILKLLHAGSEDLEVFLNAFQCLP--------- 97
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
EP +D + + H + A + E + + L K +DW RPL+E+Q
Sbjct: 98 EPMIDTQVLAAFIGHPL--------SCGFAALVAEYIHVELDKSESRTDWLARPLSEKQC 149
Query: 196 NYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
YAA D + L+ + +I AQ G ++ E
Sbjct: 150 EYAAADVYYLLPLADILMTATAQAGYMEAATGE 182
>gi|212532415|ref|XP_002146364.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces marneffei
ATCC 18224]
gi|210071728|gb|EEA25817.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces marneffei
ATCC 18224]
Length = 973
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
+ + IH + E E A S S L+G D EWKPQ S VSL+Q+A
Sbjct: 712 RKIGIHYCKNLEHAE--RAAALFSDSKLLGFDIEWKPQAQTTSGIKSNVSLIQIA----- 764
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
N + L ++ I +L LK L S D +K+G K D
Sbjct: 765 ---------NEERIALFHIALFKGNEIHDLVPPSLKLLLESTDTVKVGVSIKAD------ 809
Query: 122 TFCSQGCDIGFDRVEPYLDITSI----YNHLHH-KQLGRKLPKETK----SLANICKELL 172
CS R+ +LDI + +HL+ + G PK +LA +ELL
Sbjct: 810 --CS--------RIRRHLDIDTRGQFELSHLYKLVKYGSTQPKSVNRRAVNLAQQVEELL 859
Query: 173 DISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+ L K +++ SDW+ +PL Q YAA DA+ I ++N + K
Sbjct: 860 GLPLRKDSDVRKSDWT-KPLDYAQVQYAASDAYACICLYNTLEAK 903
>gi|440475179|gb|ELQ43880.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae Y34]
gi|440487108|gb|ELQ66914.1| exosome complex exonuclease RRP6 [Magnaporthe oryzae P131]
Length = 854
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+++L D+G L + +++ H +
Sbjct: 320 EILNEVFADPSIVKVFHGAFMDIVWLQR-------DLG-------LYVVGLFDTFHAAE- 364
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L +KSLA + K+ +D K Q +DW RPL EE YA D H L+ ++++ +
Sbjct: 365 --ALMYPSKSLAYLLKKFVDFEADKRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMR 422
>gi|397521446|ref|XP_003830806.1| PREDICTED: Werner syndrome ATP-dependent helicase [Pan paniscus]
Length = 1405
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|403371484|gb|EJY85623.1| 3'-5' exonuclease family protein [Oxytricha trifallax]
Length = 1077
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI--TSIYNHLH 149
+ + ++E+FV P I+K+ GCD + LDI ++++
Sbjct: 896 VAQYIQEIFVDPSIVKIF----------------HGCDSDIQILASDLDIFVVNLFDTAR 939
Query: 150 HKQLGRKLPK------ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
Q KLP+ + SL ++C + L I L K Q SDW RPL + +YA D+H
Sbjct: 940 AYQAIFKLPENAPKHVDLTSLESLCDKFLGIQLDKFFQVSDWRIRPLPQGMMDYARSDSH 999
Query: 204 CLIEIFNIFQVKVAQKGNSC 223
LI ++ IFQ + + NS
Sbjct: 1000 FLIPLYTIFQQILTGQINSV 1019
>gi|306921707|dbj|BAJ17933.1| Werner syndrome, RecQ helicase-like [synthetic construct]
Length = 1432
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|114619614|ref|XP_528104.2| PREDICTED: Werner syndrome ATP-dependent helicase [Pan troglodytes]
Length = 1432
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|390345989|ref|XP_001198503.2| PREDICTED: exosome component 10 [Strongylocentrotus purpuratus]
Length = 752
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L+R+L QS + +D E S++S L+Q+ S A +++D
Sbjct: 276 LSRSLKQSKEIAVDLE---HHSYRSYLGFTCLMQI--------------STAEHDYVVD- 317
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
++ L S ++L + F P I+K+ D+ +L D+G +
Sbjct: 318 -TLELRSELQMLNDAFTDPKIVKVFHGANMDIDWLQR-------DLGL----------YV 359
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N Q R L SLA++ + K+ Q +DW RPL EE +YA D H
Sbjct: 360 VNMFDTHQASRSLGFPHHSLASLLSRYCQVEADKQYQLADWRIRPLPEEMLHYAREDTHY 419
Query: 205 LIEIFNIFQVKVAQKGN 221
L+ I++ + ++ ++GN
Sbjct: 420 LLYIYHTMKNELIKRGN 436
>gi|74196546|dbj|BAE34397.1| unnamed protein product [Mus musculus]
Length = 265
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 58/255 (22%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQP 63
+V S E+ + + L+ LS +VG D EW P +RS RV+++QL
Sbjct: 47 IVYSYEASDCSFLSEDISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV-- 98
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
E+ + + +S P + LK L + I K G + D L F
Sbjct: 99 --------SENKCYLFHISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF 145
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKEL 180
D+ ++E ++++T + N KL ET SL + K +L L K +
Sbjct: 146 -----DV---KLESFVELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSI 189
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKG 240
+CS+WSN PLTE+QK YAA DA+ + I+ K+ G++ + NL L +K
Sbjct: 190 RCSNWSNFPLTEDQKLYAATDAYAGLIIYQ----KLGNLGDTVQVFALNKEENLPLEMKK 245
Query: 241 IL-----EKPDIGNK 250
L E D+ N+
Sbjct: 246 QLNLISEEMRDLANR 260
>gi|440907539|gb|ELR57678.1| Werner syndrome ATP-dependent helicase [Bos grunniens mutus]
Length = 1430
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + RV+L+QL ES + + +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPAYK-KGTLSRVALIQLCVA----------ESKCYLFHISSM 115
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G +QD L F DI + +++T +
Sbjct: 116 SGFP-----QGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DINLKSI---VELTDV 162
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CS+WS PLTE+QK YAA D
Sbjct: 163 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSIRCSNWSRFPLTEDQKVYAATD 214
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 215 AYAGFIIY 222
>gi|29349740|ref|NP_813243.1| hypothetical protein BT_4332 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298384013|ref|ZP_06993574.1| 3'-5' exonuclease domain protein [Bacteroides sp. 1_1_14]
gi|383120679|ref|ZP_09941404.1| hypothetical protein BSIG_2318 [Bacteroides sp. 1_1_6]
gi|29341650|gb|AAO79437.1| 3'-5' exonuclease-like protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840275|gb|EES68357.1| hypothetical protein BSIG_2318 [Bacteroides sp. 1_1_6]
gi|298263617|gb|EFI06480.1| 3'-5' exonuclease domain protein [Bacteroides sp. 1_1_14]
Length = 216
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 44/217 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSS-LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +IH++ S T A A QS ++G+D+E +P + + +V+LLQ++
Sbjct: 21 PGRIHVIQSEAE---TEKAVAYLQSQPILGIDSETRPSFTKGQSH-KVALLQIS------ 70
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
SDE +F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 71 ----SDE--CCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFT 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
Q C + + R+ + KSL I L +SK + S+
Sbjct: 120 QQSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
W L++ QK YAA DA + I+N+ Q ++ + GN
Sbjct: 161 WEADVLSDGQKQYAATDAWACLNIYNLLQ-ELKRTGN 196
>gi|339252698|ref|XP_003371572.1| exosome component 10 [Trichinella spiralis]
gi|316968157|gb|EFV52483.1| exosome component 10 [Trichinella spiralis]
Length = 827
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 88 PLPSIWE---LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
P P IW +L E FV P+I+K+ QD+ +L F + + ++
Sbjct: 307 PFP-IWHEMYILNEPFVDPNIVKVMHGSSQDIQWLQRDFG--------------IYVVNL 351
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ H ++ L +SL + KEL+ ++L K Q +DW RPL + YA D+H
Sbjct: 352 FDTYHAMEV---LEMPQRSLKFLVKELVGVNLDKSYQTADWRIRPLGSKMLAYARSDSHY 408
Query: 205 LIEIFNIFQVKVAQKGNSCSSI 226
L+ +++ + ++ +GN + +
Sbjct: 409 LLYCWDVLRNQLLNRGNEYNDL 430
>gi|242050364|ref|XP_002462926.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
gi|241926303|gb|EER99447.1| hypothetical protein SORBIDRAFT_02g034580 [Sorghum bicolor]
Length = 760
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 36/205 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLAR L + +D E Q S +S +L+Q++ Q +D+ +
Sbjct: 21 QLEHLARLLGEERAFAVDTE---QHSIRSFLGYTALMQISTQ--------NDD------Y 63
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L + +L+ +F + I K+ D+++L F
Sbjct: 64 LID--TIALHDVMGILRPVFANSSICKIFHGADNDVLWLQRDFH---------------- 105
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ N + L K KSLA + + +++ K +Q DW RPLT E YA
Sbjct: 106 -IYVVNMFDTAKACETLSKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPLTPEMIEYART 164
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSS 225
DAH L+ I N ++ K SS
Sbjct: 165 DAHYLLYIANCLASELHAKACDTSS 189
>gi|189467792|ref|ZP_03016577.1| hypothetical protein BACINT_04184 [Bacteroides intestinalis DSM
17393]
gi|189436056|gb|EDV05041.1| 3'-5' exonuclease [Bacteroides intestinalis DSM 17393]
Length = 210
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L Q L+G+D+E +P + + +V+LLQ++
Sbjct: 21 PGQIHMVQTPWEAE--KAVTYLKQYPLLGIDSETRPSFTKGQSH-KVALLQVSS------ 71
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
E D +F L+L+ + LP I L SP + K+G + D + L + F
Sbjct: 72 --EKD----CFLFRLNLTGLTLPII-----SLLESPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C ++ Y+ + I + KSL I L +SK + S+W
Sbjct: 121 RACI----ELQEYVRMFGI---------------QDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAEHLTEPQKQYAATDAWACLNIYNRLQ 189
>gi|119583830|gb|EAW63426.1| Werner syndrome, isoform CRA_c [Homo sapiens]
Length = 1406
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCV----------SESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|119583828|gb|EAW63424.1| Werner syndrome, isoform CRA_a [Homo sapiens]
Length = 1405
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCV----------SESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|320167779|gb|EFW44678.1| exosome component 10 protein [Capsaspora owczarzaki ATCC 30864]
Length = 945
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E AR LS S +D E RS Q V L+Q++ + VV
Sbjct: 301 ELIDFARRLSSVSEFAIDLEHHSYRSLQGF---VCLMQVSTR------------TEDVV- 344
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
+ ++ + S L+E+F +P+ILK+ D+++L F
Sbjct: 345 ---IDTLAVRSSMHHLREVFANPNILKVFHGADMDVVWLQHDFG---------------- 385
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
I +I N Q R L + SLA++ + +++ K+ Q +DW RP+ E YA
Sbjct: 386 IYTI-NMFDTGQAARVLELGSYSLAHLLRYFCNVTADKKYQLADWRIRPIPAEMLQYARE 444
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSSI 226
D H L+ I++ + ++ + N S++
Sbjct: 445 DTHYLLYIYDRLRNELVSRSNESSNL 470
>gi|389640871|ref|XP_003718068.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
gi|351640621|gb|EHA48484.1| exosome complex exonuclease Rrp [Magnaporthe oryzae 70-15]
Length = 828
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+++L D+G L + +++ H +
Sbjct: 294 EILNEVFADPSIVKVFHGAFMDIVWLQR-------DLG-------LYVVGLFDTFHAAE- 338
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L +KSLA + K+ +D K Q +DW RPL EE YA D H L+ ++++ +
Sbjct: 339 --ALMYPSKSLAYLLKKFVDFEADKRYQTADWRIRPLPEEMLYYARSDTHYLLYVYDMMR 396
>gi|325297843|ref|YP_004257760.1| 3'-5' exonuclease [Bacteroides salanitronis DSM 18170]
gi|324317396|gb|ADY35287.1| 3'-5' exonuclease [Bacteroides salanitronis DSM 18170]
Length = 210
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 35/219 (15%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V TES E R L+ S+VG+D E +P + +V+LLQ+A
Sbjct: 26 FVIYTES-EARKAVRYLNTHSVVGVDTETRPS-FKRGTVHKVALLQIATH---------- 73
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
FL L+ + LP + L+E F+ ++LK+G + D L D +
Sbjct: 74 ----DTCFLFRLNHLGLP---DFLEE-FLQNNVLKVGLSLRDDFAMLRKRNQGDPRDGNW 125
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
++ Y+ I E KSL I L +SK + S+W LTE
Sbjct: 126 IELQDYVPRFGI---------------EEKSLQKIYALLFGKKISKTQRLSNWEADVLTE 170
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
Q+ YAA DA +EI+ + + + E D+
Sbjct: 171 AQQLYAATDAWACVEIYTYLEELRSHGNYQVEKVEEADA 209
>gi|332240842|ref|XP_003269596.1| PREDICTED: Werner syndrome ATP-dependent helicase [Nomascus
leucogenys]
Length = 1433
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNKGKLGKVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|425766974|gb|EKV05562.1| hypothetical protein PDIP_82420 [Penicillium digitatum Pd1]
gi|425780125|gb|EKV18143.1| hypothetical protein PDIG_10910 [Penicillium digitatum PHI26]
Length = 630
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 38/196 (19%)
Query: 32 SSLVGLDAEWKPQRSH----QSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
S ++G D EWK Q S QSN VS++Q+A N + L ++
Sbjct: 425 SKVIGFDMEWKAQASGWDSIQSN---VSVIQIA--------------NEERIALFQIALF 467
Query: 88 -PLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
P S+ +L LK L SPDI+K+G K D L +G D + +++
Sbjct: 468 KPARSLEDLVSPSLKRLVESPDIMKVGVSIKADCTRLRKY-------LGID-AKATFELS 519
Query: 143 SIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAA 199
+Y + + + KL K +L+ KE + L K +++C DW+ R L+ Q YAA
Sbjct: 520 HLYKLIKYGKDNPKLVNKRGVNLSEQIKEHFGLPLEKSDDVRCGDWT-RALSYRQVQYAA 578
Query: 200 IDAHCLIEIFNIFQVK 215
D + + +F+ + K
Sbjct: 579 TDPYACVRLFHTMEAK 594
>gi|1280208|gb|AAC41981.1| unnamed protein product [Homo sapiens]
gi|3719421|gb|AAC63361.1| WRN [Homo sapiens]
gi|6272686|gb|AAF06162.1| WRN [Homo sapiens]
gi|60461921|gb|AAX21098.1| Werner syndrome helicase [Homo sapiens]
Length = 1432
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|126030364|pdb|2E6L|A Chain A, Structure Of Mouse Wrn Exonuclease Domain
gi|126030365|pdb|2E6M|A Chain A, Structure Of Mouse Werner Exonuclease Domain
Length = 208
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 39/204 (19%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
+V S E+ + + L+ LS +VG D EW P RV+++QL
Sbjct: 17 IVYSYEASDCSFLSEDISMRLSDGDVVGFDMEWPPIYKPGKR-SRVAVIQLCVS------ 69
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P + LK L + I K G + D L F
Sbjct: 70 ----ESKCYLFHISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF----- 115
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDW 185
D+ ++E ++++T + N KL ET SL + K +L L K ++CS+W
Sbjct: 116 DV---KLESFVELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNW 164
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIF 209
SN PLTE+QK YAA DA+ + I+
Sbjct: 165 SNFPLTEDQKLYAATDAYAGLIIY 188
>gi|119583829|gb|EAW63425.1| Werner syndrome, isoform CRA_b [Homo sapiens]
Length = 1436
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCV----------SESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|403512793|ref|YP_006644431.1| 3'-5' exonuclease family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402802886|gb|AFR10296.1| 3'-5' exonuclease family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 444
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 39/214 (18%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L + L + + LLDI L+KE DWS RPL E+ YAA+D LIE+ + +
Sbjct: 160 GRLLGYQRVGLGFMVERLLDIRLAKEHSAVDWSQRPLPEDWLRYAALDVEILIELRDRLE 219
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATS------ 267
++ + G + E IL P +T ++ + +R
Sbjct: 220 AELEEAGKLEWAREE---------FAAILAAPPKEPRTDPWRRTSGIHKVRKQRSLAAVR 270
Query: 268 --YY-------------SQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRECDKA 312
+Y + LP+ + V TMP D + + +R++G K+ R
Sbjct: 271 ELWYERDRIARERDTSPGRVLPDAAI--VEAATTMPRDANELNRIRQFGIKLARRY---- 324
Query: 313 PKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPP 346
+ K R+ + S R + GD GPPP
Sbjct: 325 -PATWLKAIDRARDMAQSELPRPNAPGD--GPPP 355
>gi|110735439|ref|NP_000544.2| Werner syndrome ATP-dependent helicase [Homo sapiens]
gi|322510082|sp|Q14191.2|WRN_HUMAN RecName: Full=Werner syndrome ATP-dependent helicase; AltName:
Full=DNA helicase, RecQ-like type 3; Short=RecQ3;
AltName: Full=Exonuclease WRN; AltName: Full=RecQ
protein-like 2
gi|37953299|gb|AAR05448.1| Werner syndrome [Homo sapiens]
Length = 1432
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|86158027|ref|YP_464812.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774538|gb|ABC81375.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-C]
Length = 294
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L + L+ + + + LSK Q SDW RPLT +Q YAA+D H L+ +F++
Sbjct: 115 ARRLGRPGLGLSALVESHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLFDLLT 174
Query: 214 VKVAQKG 220
++A +G
Sbjct: 175 GELAARG 181
>gi|303286635|ref|XP_003062607.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456124|gb|EEH53426.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 720
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+ ++ L+++ + +L L K + SDWS RPLTE Q++YAA+DA L+E+ + +
Sbjct: 649 RRRARDAVGLSHVARVVLGKPLDKSTRMSDWSARPLTERQRHYAALDAWVLVEVMRVLR 707
>gi|197122666|ref|YP_002134617.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
gi|196172515|gb|ACG73488.1| 3'-5' exonuclease [Anaeromyxobacter sp. K]
Length = 288
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L + L+ + + + LSK Q SDW RPLT +Q YAA+D H L+ +F++
Sbjct: 111 ARRLGRPGLGLSALVEAHFGVRLSKAFQRSDWGRRPLTPDQLAYAALDTHFLLPLFDLLT 170
Query: 214 VKVAQKG 220
++A +G
Sbjct: 171 GELATRG 177
>gi|436735997|ref|YP_007318125.1| DNA-directed DNA polymerase [Gloeocapsa sp. PCC 7428]
gi|428267598|gb|AFZ33542.1| DNA-directed DNA polymerase [Gloeocapsa sp. PCC 7428]
Length = 598
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 49/224 (21%)
Query: 27 RALSQSSLVGLDAE---WKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
+A+ ++L G+D E P+R R+ L+Q+A P R V L+D
Sbjct: 31 KAIQSTALFGIDCETTGLDPKRD------RLRLVQIAV-PHAR------------VLLID 71
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
L +I P + L++L SP LK+G K + +L+ G P+ D T
Sbjct: 72 LFAIA-PKHLKPLRQLLNSPA-LKIGHNLKFEWQFLTQA--------GLGLAHPFFD-TQ 120
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ + + KL SL ++ +LL + L+K LQ S+++ LT +Q YAAIDA
Sbjct: 121 LAYRIWSAGIKTKL-----SLKSVASKLLGVKLNKSLQHSNFAQAELTSQQLRYAAIDAA 175
Query: 204 CLIEIFNIFQ--------VKVAQKGNSCSSIS---ELDSSNLDL 236
L++++ I ++VA+ SC ++ EL+ LDL
Sbjct: 176 ILLDLYPILHGRLKQSQLLEVARLEFSCIPVTAQMELNGMLLDL 219
>gi|170763502|ref|NP_035851.3| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|170763504|ref|NP_001116294.1| Werner syndrome ATP-dependent helicase homolog [Mus musculus]
gi|342187359|sp|O09053.3|WRN_MOUSE RecName: Full=Werner syndrome ATP-dependent helicase homolog;
AltName: Full=Exonuclease WRN
gi|3885838|gb|AAC78077.1| Wrn protein [Mus musculus]
gi|29748014|gb|AAH50921.1| Wrn protein [Mus musculus]
gi|38173728|gb|AAH60700.1| Wrn protein [Mus musculus]
Length = 1401
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL ES +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SESKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|74142907|dbj|BAE42489.1| unnamed protein product [Mus musculus]
Length = 862
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL ES +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCVS----------ESKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|399155667|ref|ZP_10755734.1| putative 3'-5' exonuclease [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 252
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 37/204 (18%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
KIHL+T ES + + + L Q S++G D E +P + VSLLQL
Sbjct: 52 KIHLIT--ESKDVSEAIKILRQESVLGFDTETRPTFKKGDQYS-VSLLQL---------- 98
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
S FL L+ + LP E L L PDILK+G D+ L
Sbjct: 99 ----STREEAFLFRLNYLGLP---EELASLLADPDILKVGVAILDDIRALQKLR------ 145
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
FD E ++++++I G L T L N+ + +SK+ Q ++W
Sbjct: 146 -KFD-AEGFVELSNI---------GSDLGIVTCGLRNLAAIFFGVRISKKEQLTNWERPD 194
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQ 213
L Q YAA DA +++ + +
Sbjct: 195 LNSSQCLYAATDAWICLKMLSFLE 218
>gi|116203503|ref|XP_001227562.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
gi|88175763|gb|EAQ83231.1| hypothetical protein CHGG_09635 [Chaetomium globosum CBS 148.51]
Length = 827
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E+L E+F P I+K+ D+I+L D+G L + +++
Sbjct: 283 VPWRHKLEVLNEVFADPKIVKVLHGAFMDIIWLQR-------DLG-------LYVVGLFD 328
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ L KSLA + K+ +D K+ Q +DW RPL EE YA D H L+
Sbjct: 329 TFY---ASTALQYAGKSLAFLLKKFVDFDADKKYQLADWRLRPLPEEMFYYARSDTHFLL 385
Query: 207 EIFNIFQVKVAQKGNSCSS 225
I+++ + ++AQ S
Sbjct: 386 YIYDMLRNELAQLATQNGS 404
>gi|225447009|ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
Length = 936
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 75/322 (23%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ LA LS+ + +D E Q S +S +L+Q++ Q N + +
Sbjct: 121 QLKELADVLSKQRVFAVDTE---QHSLRSFLGFTALIQISTQ-----NED---------Y 163
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L ++L+ +F +P I K+ D+++L F ++
Sbjct: 164 LVD--TIALHDTLDVLQPVFANPSICKVFHGADNDVLWLQRDF--------------HIY 207
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + ++ +K LQ DW RPL+ E YA
Sbjct: 208 VVNLFDTAKACEV---LSKPQKSLAYLLETYCGVATNKLLQREDWRQRPLSVEMLEYAQT 264
Query: 201 DAHCLIEIFN--IFQVKVAQKGNSCS----------------------SISELDSSNLDL 236
DAH L+ I N I +++ NSC I E++ S +
Sbjct: 265 DAHYLLYIANCLIAELRQHDSENSCCPDDKLRFVLEASRRSNTVCLQLYIKEIEISPGES 324
Query: 237 GLKGILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKI 296
I+ + G + K C+ D++R C +++RV DESL +
Sbjct: 325 AASSIISRHLNGQGGISSKACDLQDLVRRL-----CTWRDLMARVH-------DESLRYV 372
Query: 297 VRKYGEKILLRECDKAPKTSKK 318
+ ++ ++ DK P T K+
Sbjct: 373 L---SDQAIIALADKVPTTQKE 391
>gi|312375236|gb|EFR22650.1| hypothetical protein AND_14417 [Anopheles darlingi]
Length = 782
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 6 RKPLK---IHLVTSTESPEF--THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
R PL+ +H++ + + + L R + ++G D EW S+Q V+LLQLA
Sbjct: 44 RDPLRGQQVHIINTADECRLIVSKLHRHCQEYKVLGFDCEWV---SNQGQRRPVALLQLA 100
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
G +++ L ++ +P + L +L +I+K+G +D L
Sbjct: 101 SHRGL----------CALIRLCMINKLP-----QELYDLLNDDNIIKVGVSPYEDARLLR 145
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK-- 178
+ +VE LD+ + + + E +A + E+L ++L K
Sbjct: 146 EDYKL--------KVESTLDL---------RFMAERAGLEPFGIARLANEVLGLTLDKHW 188
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
+++CSDW L++ Q YAA DAH +E+F F K+
Sbjct: 189 KIRCSDWEAPDLSDRQIKYAASDAHVAVELFKKFAYKL 226
>gi|229820453|ref|YP_002881979.1| 3'-5' exonuclease [Beutenbergia cavernae DSM 12333]
gi|229566366|gb|ACQ80217.1| 3'-5' exonuclease [Beutenbergia cavernae DSM 12333]
Length = 416
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 140 DITSIYNHLHHKQL-GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
++ + H+ +L GR L +E LA I ++ L ++L+KE DWS RPL E+ YA
Sbjct: 103 EVGLVPRHVFDTELAGRLLGRERVGLAAIVEQELGLTLAKEHSAVDWSTRPLREDWLRYA 162
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
A+D L+E+ + + + + G + + E +
Sbjct: 163 ALDVEVLVELRDALERDLVRAGKAEWAREEFE 194
>gi|401413034|ref|XP_003885964.1| Ribonuclease D, related [Neospora caninum Liverpool]
gi|325120384|emb|CBZ55938.1| Ribonuclease D, related [Neospora caninum Liverpool]
Length = 1387
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 105/260 (40%), Gaps = 44/260 (16%)
Query: 7 KPLK-IHLVTSTESPEFTHLARALSQSS--LVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
KPLK LV +E E HL LS + LV +D E S S LLQL+ +
Sbjct: 451 KPLKDTPLVRISEKEELQHLVDELSTGAHPLVAIDLE---HHSFHSYRGFTCLLQLSTR- 506
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
E D +L+D PL +L + +P ILK+ D+I+L F
Sbjct: 507 ------EKD-------YLID--PFPLFEHLHVLNAITANPKILKIFHGADSDIIWLQRDF 551
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISLSKELQC 182
+ N R L SLAN+ + +K+ Q
Sbjct: 552 S-----------------VYVVNMFDTCVAARALAVPGGASLANLLHTYCGVEANKQYQL 594
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL 242
+DW RPLT E + YA D H L IF++ + ++ K ++S + L+ G L
Sbjct: 595 ADWRRRPLTPEMEAYARSDTHYLPFIFDVMKNQLLSKPELGGALSPPAVTGLEEG----L 650
Query: 243 EKPDIGNKTVRFKLCEALDI 262
E + G + ++F L + D+
Sbjct: 651 EVTEAGQQAMQFTLDRSRDV 670
>gi|265762514|ref|ZP_06091082.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263255122|gb|EEZ26468.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 216
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ TES E L +++G+D+E +P + + + +V+LLQ++
Sbjct: 21 PGRIHVI-QTES-EAQKAVVYLQSQTILGIDSETRPSFT-KGHSHKVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P I EL P ++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQPII-----ELLEDPKVIKVGLSLKDDFMMLHKRAPFNQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + V P+ + KSL I L +SK + S+W
Sbjct: 121 QACIELQEYVRPF-------------------GIQDKSLQKIYGILFSEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
LT+ QK YAA DA + I+++ + ++ + GN
Sbjct: 162 EADVLTDAQKQYAATDAWACLNIYHLLE-ELKRTGN 196
>gi|380694086|ref|ZP_09858945.1| hypothetical protein BfaeM_08908 [Bacteroides faecis MAJ27]
Length = 216
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 46/233 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ S E L ++G+D+E +P + + +V+LLQ++
Sbjct: 21 PGRIHVIQSEAETE--KAVAYLKSQPILGIDSETRPSFTKGQSH-KVALLQIS------- 70
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
SDE +F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 71 ---SDE--CCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN----SCSSISELDSSNL 234
L++ QK YAA DA + I+N+ Q ++ + GN S + E+++S+L
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKRTGNYEVESLPAEEEVNASSL 213
>gi|410081706|ref|XP_003958432.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
gi|372465020|emb|CCF59297.1| hypothetical protein KAFR_0G02660 [Kazachstania africana CBS 2517]
Length = 735
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 22 FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFL 81
H+ + + + + +D E R++ + V L+Q++ + E+D +L
Sbjct: 222 LNHMLNDIKKYTEIAIDLEHHDYRTY---YGIVCLMQISTR-------ETD-------YL 264
Query: 82 LDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+D +I L + ++L E+F P ++K+ D+I+L D+G L I
Sbjct: 265 VD--TIALRNDLKVLNEVFTDPSVVKVLHGAFMDIIWLQR-------DLG-------LYI 308
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
S+++ H R L SLA + +E + SK+ Q +DW RPL++ YA D
Sbjct: 309 VSLFDTFH---ASRALGFPRHSLAYLLEEFANFKTSKKYQLADWRVRPLSKAMTAYARAD 365
Query: 202 AHCLIEIFNIFQVKVAQKGNSCSSISE 228
H L+ I++ + ++ + ++E
Sbjct: 366 THFLLNIYDQLRNRLVETNKLVGVLNE 392
>gi|374287715|ref|YP_005034800.1| putative 3'-5' exonuclease [Bacteriovorax marinus SJ]
gi|301166256|emb|CBW25831.1| putative 3'-5' exonuclease [Bacteriovorax marinus SJ]
Length = 193
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPE 70
IHL+T + E +A+ LS ++G D E +P N+ V+LLQL
Sbjct: 24 IHLIT--DDAEAIKIAKKLSSEEILGFDTETRPSFKKGENYD-VALLQL----------- 69
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
S E++A +L L+ + LP+ EL+ +L +I+K G + D+ L +
Sbjct: 70 STENDA---YLFRLNKMKLPN--ELV-DLLADENIVKAGVAVRDDIKSLQK--------L 115
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
+ E + ++ + L K G L +C L+ LSK + ++W L
Sbjct: 116 NPFKEESFCELQDVAKELGVKNFG---------LRALCAIFLNYRLSKRAKITNWEQPKL 166
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQV 214
T+ Q +YAA DA ++I+ Q+
Sbjct: 167 TQAQIHYAACDAWVGLQIYKKMQL 190
>gi|347966136|ref|XP_321572.5| AGAP001549-PA [Anopheles gambiae str. PEST]
gi|333470194|gb|EAA01810.5| AGAP001549-PA [Anopheles gambiae str. PEST]
Length = 824
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 6 RKPLK---IHLVTSTESPEFT--HLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
R PL+ +H++ + + L R + +++G D EW S+Q V+LLQLA
Sbjct: 43 RDPLRGQQVHIINTADDCRMIVEKLQRHCQEYNVLGFDCEWV---SNQGKRRPVALLQLA 99
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
G +++ L ++ IP + L +L +I+K+G +D L
Sbjct: 100 SHRGL----------CALIRLCMINRIP-----QELYDLLNDDNIIKVGVSPYEDARVLR 144
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK-- 178
+ +VE LD+ + + + E +A + E+L ++L K
Sbjct: 145 EDYRL--------KVESTLDL---------RYMAERAGLEPLGIARLANEVLGLTLDKHW 187
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
+++CSDW + L++ Q YAA DAH +E+F K+
Sbjct: 188 KVRCSDWESPELSDRQIKYAASDAHVAVEMFKKLSYKL 225
>gi|407261615|ref|XP_003946318.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Mus
musculus]
Length = 1434
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 130 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 173
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 174 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 220
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 221 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 272
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 273 YAATDAYAGLIIY 285
>gi|99032230|pdb|2FBT|A Chain A, Wrn Exonuclease
gi|99032231|pdb|2FBV|A Chain A, Wrn Exonuclease, Mn Complex
gi|99032232|pdb|2FBX|A Chain A, Wrn Exonuclease, Mg Complex
gi|99032233|pdb|2FBY|A Chain A, Wrn Exonuclease, Eu Complex
gi|99032234|pdb|2FC0|A Chain A, Wrn Exonuclease, Mn Dgmp Complex
Length = 205
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 38 ISMSLSDGDVVGFDMEWPPLY-NRGKLGKVALIQLCVS----------ESKCYLFHVSSM 86
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 87 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 133
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 134 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 185
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 186 AYAGFIIYRNLEI 198
>gi|262408617|ref|ZP_06085163.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646256|ref|ZP_06723909.1| 3'-5' exonuclease [Bacteroides ovatus SD CC 2a]
gi|294805802|ref|ZP_06764678.1| 3'-5' exonuclease [Bacteroides xylanisolvens SD CC 1b]
gi|336406968|ref|ZP_08587610.1| hypothetical protein HMPREF0127_04923 [Bacteroides sp. 1_1_30]
gi|345511326|ref|ZP_08790870.1| hypothetical protein BSAG_01819 [Bacteroides sp. D1]
gi|229444317|gb|EEO50108.1| hypothetical protein BSAG_01819 [Bacteroides sp. D1]
gi|262353482|gb|EEZ02576.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638389|gb|EFF56754.1| 3'-5' exonuclease [Bacteroides ovatus SD CC 2a]
gi|294446978|gb|EFG15569.1| 3'-5' exonuclease [Bacteroides xylanisolvens SD CC 1b]
gi|335948443|gb|EGN10151.1| hypothetical protein HMPREF0127_04923 [Bacteroides sp. 1_1_30]
Length = 222
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--RAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|423212341|ref|ZP_17198870.1| hypothetical protein HMPREF1074_00402 [Bacteroides xylanisolvens
CL03T12C04]
gi|392694787|gb|EIY88013.1| hypothetical protein HMPREF1074_00402 [Bacteroides xylanisolvens
CL03T12C04]
Length = 222
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--RAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|67848464|gb|AAY82265.1| hypothetical protein At2g32420 [Arabidopsis thaliana]
Length = 327
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TES + LA L++ + +D E Q S +S +L+Q++ E D
Sbjct: 124 TES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EED---- 168
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 169 ---FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFH------------ 211
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ N + L K +SLA + + + ++ +K LQ DW RPL+EE
Sbjct: 212 -----IYVVNMFDTAKACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVR 266
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS 225
YA DAH L+ I + ++ Q SS
Sbjct: 267 YARXDAHYLLYIADSLTTELKQLATDSSS 295
>gi|298481453|ref|ZP_06999645.1| 3'-5' exonuclease domain protein [Bacteroides sp. D22]
gi|295086916|emb|CBK68439.1| Ribonuclease D [Bacteroides xylanisolvens XB1A]
gi|298272317|gb|EFI13886.1| 3'-5' exonuclease domain protein [Bacteroides sp. D22]
Length = 222
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--RAVAYLQSRSVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|332025467|gb|EGI65632.1| Exonuclease 3'-5' domain-containing protein 2 [Acromyrmex
echinatior]
Length = 606
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 40/189 (21%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
++G D EW + VSLLQLA G ++ L + I I
Sbjct: 95 GVLGFDCEWVKEGP-------VSLLQLATYNG-------------LIALFRIGKIGY--I 132
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
LKEL S ILK+G +D + + GC RV LD+ ++ + +
Sbjct: 133 PPKLKELLASKHILKVGISSFEDGHKIVKDY---GC-----RVNGTLDLRTLAENFN--- 181
Query: 153 LGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
LP KSLA +C E L+I + K E++C DW LT+EQ YAA DA + +++
Sbjct: 182 ----LPSR-KSLAAMCLEYLNIEMDKIIEVRCGDWDASTLTDEQVAYAACDALASVIVYH 236
Query: 211 IFQVKVAQK 219
K +K
Sbjct: 237 KIMQKEKEK 245
>gi|348578015|ref|XP_003474779.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Cavia
porcellus]
Length = 1486
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 33/187 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS ++G D EW P S + RV+L+QL ES + + +
Sbjct: 69 ISMRLSPGDVIGFDMEWPPTYS-KGKLSRVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENEAIKKAGVGIEGDQWKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDA 202
N + E SL + K L L K ++CS+WSN PL+E+QK YAA DA
Sbjct: 165 ANQ-------KLKSTEIWSLNGLVKHLFGKQLLKDKSVRCSNWSNFPLSEDQKLYAATDA 217
Query: 203 HCLIEIF 209
+ + I+
Sbjct: 218 YAGLIIY 224
>gi|170048985|ref|XP_001853674.1| 3'-5' exonuclease [Culex quinquefasciatus]
gi|167870951|gb|EDS34334.1| 3'-5' exonuclease [Culex quinquefasciatus]
Length = 755
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 41/223 (18%)
Query: 5 YRKPL---KIHLVTSTESPE--FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQL 59
+R PL I +VT+ E + L ++G D EW ++ + V+LLQL
Sbjct: 38 FRGPLYDQTIRVVTNAEECQQVVGTLRNHCRDYRILGFDCEWVTEKGKRHP---VALLQL 94
Query: 60 ACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYL 119
A G +++ L + IP P + ELL + P ILK+G +D L
Sbjct: 95 ASHQGL----------CALIRLCQMKRIP-PELGELLND----PGILKVGIGAIEDAQLL 139
Query: 120 SSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE 179
S + +VE LD+ HL + ++P +A + ++ L + L K
Sbjct: 140 RSDYNL--------KVESALDL----RHLAERC---RVPGPY-GMARLAEKSLGLQLDKH 183
Query: 180 --LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
++ SDW L+E Q YAA DAH +E+F ++ +V + G
Sbjct: 184 WRVRASDWEALELSERQLKYAANDAHVAVELFRLYADRVLRCG 226
>gi|379731252|ref|YP_005323448.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
gi|378576863|gb|AFC25864.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
Length = 194
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 41/189 (21%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLL-DLSS 86
AL+Q ++G D E KP P VSL+QLA P+ VFL+ +L S
Sbjct: 39 ALNQCKILGFDTESKPSFRKGEYHP-VSLIQLAM-------PDK-------VFLIRNLKS 83
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST--FCSQGCDIGFDRVEPYLDITSI 144
+ LK LF +P I+K G + D+ L F ++G + DI I
Sbjct: 84 ----GFSDGLKALFENPKIVKAGPALRDDIRDLQRLRPFKAKG----------FKDIADI 129
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+Q+G + N+ L +SK Q S+W PL++ Q YAA DA+
Sbjct: 130 AKANGIQQMGAR---------NLTAIFLGKRISKSQQTSNWEREPLSQAQNFYAATDAYL 180
Query: 205 LIEIFNIFQ 213
++I+ +FQ
Sbjct: 181 GLKIYTLFQ 189
>gi|156361913|ref|XP_001625528.1| predicted protein [Nematostella vectensis]
gi|156212365|gb|EDO33428.1| predicted protein [Nematostella vectensis]
Length = 552
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L + LL E F +P+ILK+ D+ +L F
Sbjct: 300 FLVD--TLELRNDLHLLNESFTNPNILKVFHGADMDVGWLQRDFG--------------- 342
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L E SLA + K+ ++ K+ Q +DW RPL EE YA
Sbjct: 343 --IYVVNMFDTGQASRVLALERFSLAFLLKKFCGVTADKQYQLADWRIRPLPEEMIRYAR 400
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSI 226
D H L+ I + + ++ + GN +++
Sbjct: 401 EDTHYLLYIHDRLRNELIRTGNENNNL 427
>gi|426359284|ref|XP_004046910.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Gorilla gorilla gorilla]
Length = 1429
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMRLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|345781559|ref|XP_539984.3| PREDICTED: Werner syndrome ATP-dependent helicase [Canis lupus
familiaris]
Length = 1412
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ LS +VG D EW P + + RV+L+QL E+ + + +
Sbjct: 69 ISMNLSTGGVVGFDMEWPPVYTKRKP-SRVALIQLCV----------SENKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G K D L CD D ++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENEAIKKAGVGIKGDQRKLL-------CDFDID-LKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CS+W + PLTE+QK YAA D
Sbjct: 165 ANE--------KLKCTETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ + I+ ++
Sbjct: 217 AYAGLIIYQKLEI 229
>gi|260950129|ref|XP_002619361.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
gi|238846933|gb|EEQ36397.1| hypothetical protein CLUG_00520 [Clavispora lusitaniae ATCC 42720]
Length = 738
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQLG 154
L E+F +P ILK+ D+I+L D+G L I S+++ H K+LG
Sbjct: 283 LNEIFANPAILKVLHGANMDIIWLQR-------DLG-------LYIVSLFDTYHASKKLG 328
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
PK SLA + + SK+ Q +DW RPLT+ YA D H L+ I++ +
Sbjct: 329 --FPK--FSLAYLLENFAHFKTSKKYQLADWRIRPLTDAMMQYARADTHFLLNIYDQLRN 384
Query: 215 KVAQKG 220
K+ G
Sbjct: 385 KLLNAG 390
>gi|395506589|ref|XP_003757614.1| PREDICTED: probable exonuclease mut-7 homolog, partial [Sarcophilus
harrisii]
Length = 752
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 33/192 (17%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
L +VG+D EW+P PRVS+LQ+A + V+LLDL
Sbjct: 276 VLQPGQVVGIDMEWRPSFGLVGR-PRVSVLQIATKEH--------------VYLLDLLQF 320
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
E KEL + DL LS+T+ + + LD+ +
Sbjct: 321 SKLDQEEKEKELC---------YGMSGDLCSLSTTY--PALREMEKQAQGILDLLQVDKQ 369
Query: 148 LHHK------QLGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ K P++ K L+ + + LL L K Q S+W RPL EEQ YAA
Sbjct: 370 VRMGVSSSLPSFITKSPRQAEKGLSLLVQNLLGKPLDKTEQLSNWEKRPLREEQILYAAS 429
Query: 201 DAHCLIEIFNIF 212
DA+CL+E++ +
Sbjct: 430 DAYCLLEVYEML 441
>gi|357059998|ref|ZP_09120772.1| hypothetical protein HMPREF9332_00329 [Alloprevotella rava F0323]
gi|355376888|gb|EHG24128.1| hypothetical protein HMPREF9332_00329 [Alloprevotella rava F0323]
Length = 210
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
+V E AL +S ++G+D E +P + F +V+LLQ+A
Sbjct: 25 IVVIQSKAEAERAVAALEKSKILGIDTETRPS-FRKGVFHQVALLQIA------------ 71
Query: 73 ESNASVVFLLDLSSIP-LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIG 131
N + FL L+S +PS L++L + +ILK+G K D+ L+
Sbjct: 72 --NEDICFLFRLNSFGFIPS----LRKLLANKEILKIGLSLKDDIHMLAQRHAFVP---- 121
Query: 132 FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
+ +LD+ + K++G + K AN+ + +SK Q S+W L+
Sbjct: 122 ----DHFLDLQD-----YVKEMGIQDMSLQKLFANV----FHLRISKNAQLSNWEADVLS 168
Query: 192 EEQKNYAAIDAHCLIEIFN 210
QK YAA DA+ I ++N
Sbjct: 169 PAQKTYAATDAYSCIMLYN 187
>gi|50286743|ref|XP_445801.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525107|emb|CAG58720.1| unnamed protein product [Candida glabrata]
Length = 737
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 38/187 (20%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ + L +SS + +D E RS+ + V L+Q++ + +++D
Sbjct: 225 MMQELKKSSEIAVDLEHHDFRSY---YGLVCLMQISTRTQD--------------YIVD- 266
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L ++L E+F +P I K+ D+I+L D+G L I S+
Sbjct: 267 -TIALRDDLKMLNEVFTNPLITKVFHGAFMDIIWLQR-------DLG-------LYIVSL 311
Query: 145 YNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
++ H K LG LPK SLA + ++ + SK+ Q +DW RPL++ YA D H
Sbjct: 312 FDTFHASKALG--LPKH--SLAYLLEKYANFKTSKKYQLADWRRRPLSKAMMAYARADTH 367
Query: 204 CLIEIFN 210
L+ IF+
Sbjct: 368 FLLNIFD 374
>gi|403294330|ref|XP_003938145.1| PREDICTED: Werner syndrome ATP-dependent helicase [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPVY-NKGKLGKVALIQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F D+ +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAIKKAGVGIEGDQWKLLRDF-----DV---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL + K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCIETWSLNGLIKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRKLEI 229
>gi|229442293|gb|AAI72837.1| Werner syndrome protein [synthetic construct]
Length = 281
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P ++ +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPP-LYNRGKLGKVALIQLCVS----------ESKCYLFHVSSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K LL L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|412985318|emb|CCO20343.1| predicted protein [Bathycoccus prasinos]
Length = 422
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 12 HLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPES 71
HL + + T + + +++G D E +P S + +V+L+Q A +
Sbjct: 29 HLSELLKEKDITRSVESRHRYAVIGFDTETRPTFSKVAKKNKVALVQFASK--------- 79
Query: 72 DESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIG 131
+V L+ L+S+ + E++ ++ + + LGF K DL L +
Sbjct: 80 -----NVACLIHLASMN-GKVPEMMTKILREKEYVLLGFGIKTDLKELKTEHYGNEDKES 133
Query: 132 FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
D V ++D+ +I H++ G K +AN LD+ K +Q S+W N PL
Sbjct: 134 VD-VNAFIDLATISEVFKHERPG------MKGMANHFG--LDVEKPKAVQISNWENSPLR 184
Query: 192 EEQKNYAAIDA 202
E Q YAA DA
Sbjct: 185 EGQVKYAAEDA 195
>gi|414886886|tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 960
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLAR L + +D E Q S +S +L+Q++ Q + +
Sbjct: 146 QLEHLARLLGEERAFAVDTE---QHSIRSFLGYTALMQISTQ--------------NEDY 188
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L + +L+ +F + I K+ D+++L F ++
Sbjct: 189 LID--TIALHDVMGILRPVFANSSICKIFHGADNDILWLQRDF--------------HIY 232
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + +++ K +Q DW RPLT E YA
Sbjct: 233 VVNMFDTAKACEI---LLKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPLTPEMIEYART 289
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCS 224
DAH L+ I N ++ K + S
Sbjct: 290 DAHYLLYIANCLASELHAKAYTSS 313
>gi|66816197|ref|XP_642108.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470232|gb|EAL68212.1| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 718
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPES---DESNASVVFLLDLSSIPLP 90
++G DAEW SNF + ++N + S+ + FL+ +S +
Sbjct: 194 IIGFDAEW-------SNFNSIDDSTTTTTTTSKYNHKVALIQLSSKNETFLIQVSQ--ME 244
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTF--CSQGCDIGFDRVEPYLDITSIYNHL 148
I L+++ P ++K+G QD + TF ++GC +D+ I
Sbjct: 245 KIPTSLEQILTDPRLIKVGVAVSQDAATIFQTFSVVTKGC----------VDLVPI---- 290
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLI 206
R E LA++ +++++L K ++CS W N+ LT +Q +YAA DA
Sbjct: 291 -----ARLTNYEGNGLASLALNVMNVTLDKSNLIRCSHWENKDLTNDQIHYAAADAWVGR 345
Query: 207 EIFNIF 212
EIF I
Sbjct: 346 EIFEIM 351
>gi|330926290|ref|XP_003301407.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
gi|311323973|gb|EFQ90519.1| hypothetical protein PTT_12892 [Pyrenophora teres f. teres 0-1]
Length = 796
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P ILK+ D+I+L D+G L I +++ H
Sbjct: 278 ECLNEVFADPSILKVLHGAFMDIIWLQR-------DLG-------LYIVGLFDTFH---A 320
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L + SLA + + ++ K+ Q +DW RPL++E YA D H L+ IF+ +
Sbjct: 321 ARALGYQAASLAYLLELHVNFKAQKQYQLADWRQRPLSKELFEYARADTHFLLYIFDNMR 380
Query: 214 VKVAQKGN 221
++ K +
Sbjct: 381 NELVNKSD 388
>gi|255566405|ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 977
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 42/237 (17%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
K +K V + L LS S+ +D E Q S +S +L+Q++ Q
Sbjct: 117 KEMKDDYVWVETESQLKELTDELSNQSVFAVDTE---QHSLRSFLGFTALVQISTQKED- 172
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ 126
+LLD +I L +L +F +P I K+ D+++L F
Sbjct: 173 -------------YLLD--TIALHDAMGILGAVFANPKICKVFHGGDNDILWLQRDF--- 214
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
++ + ++++ ++ L K KSLA + + +S +K LQ DW
Sbjct: 215 -----------HIYVVNLFDTAKACEV---LSKPQKSLAYLLETYCGVSTNKLLQREDWR 260
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILE 243
RPL E YA DAH L+ I + ++ QK N S S D+ LK ILE
Sbjct: 261 QRPLPAEMLQYALTDAHYLLYIASCLIAELKQKDNDNS------YSYPDVKLKFILE 311
>gi|452837795|gb|EME39736.1| hypothetical protein DOTSEDRAFT_138360 [Dothistroma septosporum
NZE10]
Length = 784
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+FV P I+K+ D+++L D+G L I +++ H+ R
Sbjct: 286 LNEVFVDPSIVKVLHGAYMDIVWLQR-------DLG-------LYIVGLFD-THYA--AR 328
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L SLA + K+ +D K+ Q +DW RPL +E +YA D H L+ IF+ + +
Sbjct: 329 ALGYTGGSLAFLLKKFIDFDAQKQYQMADWRIRPLPQELFDYARSDTHFLLYIFDNMRNE 388
Query: 216 VAQKGN 221
+ Q+ +
Sbjct: 389 LVQRSD 394
>gi|380485396|emb|CCF39387.1| 3'-5' exonuclease [Colletotrichum higginsianum]
Length = 732
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+++L D+G V D LH+ Q
Sbjct: 135 EVLNEVFADPSIVKVFHGAFMDMVWLQR-------DLGL-YVNGLFDTGMACEVLHYPQ- 185
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
KSLA + K+ ++ K+ Q +DW RPL+EE YA D H L+ I++ +
Sbjct: 186 --------KSLAFLLKKFVNFDADKKYQLADWRVRPLSEEMLYYARSDTHYLLYIYDKMR 237
Query: 214 ---VKVAQKGNSCSSISE 228
V + +GN S E
Sbjct: 238 NELVMKSDRGNPGSDYIE 255
>gi|148703462|gb|EDL35409.1| Werner syndrome homolog (human) [Mus musculus]
Length = 1385
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVAN--------EKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|7595900|gb|AAF64490.1|AF241636_1 WRN protein [Mus musculus]
Length = 1401
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|2130973|dbj|BAA20269.1| WRN typeI [Mus musculus]
gi|2130975|dbj|BAA20270.1| WRN typeII [Mus musculus]
Length = 1401
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|218199707|gb|EEC82134.1| hypothetical protein OsI_26176 [Oryza sativa Indica Group]
Length = 949
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 43/239 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
LAR L +D E Q S +S +L+Q++ Q +L+D
Sbjct: 157 LARLLDDEKAFAVDTE---QHSLRSFLGYTALMQISTQKAD--------------YLID- 198
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L + +L+ +F +P I K+ D+++L F ++ + ++
Sbjct: 199 -TIALHDVMSILRPVFANPSICKIFHGADNDVLWLQRDF--------------HIYVVNM 243
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ ++ L K KSLA + + ++ K +Q DW RPLT E YA DAH
Sbjct: 244 FDTAKACEV---LSKPQKSLAYLLELYCGVTTDKTMQREDWRLRPLTPEMIQYARCDAHY 300
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDII 263
L+ I N ++ K S DS N + E N + +K+C D++
Sbjct: 301 LLYIANCLASELHAKTYDAS-----DSPNDKINF--FFEASHRSNMDLVWKICAWRDLM 352
>gi|222637126|gb|EEE67258.1| hypothetical protein OsJ_24424 [Oryza sativa Japonica Group]
Length = 949
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 43/239 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
LAR L +D E Q S +S +L+Q++ Q +L+D
Sbjct: 157 LARLLDDEKAFAVDTE---QHSLRSFLGYTALMQISTQKAD--------------YLID- 198
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L + +L+ +F +P I K+ D+++L F ++ + ++
Sbjct: 199 -TIALHDVMSILRPVFANPSICKIFHGADNDVLWLQRDF--------------HIYVVNM 243
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
++ ++ L K KSLA + + ++ K +Q DW RPLT E YA DAH
Sbjct: 244 FDTAKACEV---LSKPQKSLAYLLELYCGVTTDKTMQREDWRLRPLTPEMIQYARCDAHY 300
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDII 263
L+ I N ++ K S DS N + E N + +K+C D++
Sbjct: 301 LLYIANCLASELHAKTYDAS-----DSPNDKINF--FFEASHRSNMDLVWKICAWRDLM 352
>gi|397643395|gb|EJK75835.1| hypothetical protein THAOC_02433 [Thalassiosira oceanica]
Length = 240
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 5 YRKPLKIHLVT-STESPEFTHLARALSQSSLVGLDAEWKPQRS---HQSNFPRVSLLQLA 60
+RK LK+ +V + E+ E + L +GLDAEW+ R Q +V+ +Q+A
Sbjct: 23 FRK-LKVKVVRHANETNEAVNAMMELMVGKRIGLDAEWEIIRGTAGRQVGRSKVNTIQIA 81
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
+ ++N V ++ + + + S+ LK L V I G K DLI +
Sbjct: 82 YR----------DTNHDVTVII-VRTERMTSLPNRLKSLLVGSSIKIAGNKVSADLIKIG 130
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYN-HLHHKQLGRKLPKETKSLANICKELLDISLSKE 179
F D+ + +++N + K G SL + K LL I L K+
Sbjct: 131 VDF-----DVAEIKSVDQKSRVNVFNLGMVAKHRGLVTNAAHVSLMYLAKVLLHIRLDKD 185
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
LQ S +S LT++Q Y A+D +E F
Sbjct: 186 LQTSGFSGESLTQDQLRYIAVDGAVSLEAF 215
>gi|401623674|gb|EJS41765.1| rrp6p [Saccharomyces arboricola H-6]
Length = 733
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 42/238 (17%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L +L E+F P I+K+ D+I+L D+G L
Sbjct: 263 YLVD--TIELRENLHILNEVFTDPSIIKVFHGAFMDIIWLQR-------DLG-------L 306
Query: 140 DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
I S+++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ YA
Sbjct: 307 YIVSLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAYA 362
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL-EKPDIGNKTVRFKLC 257
D H L+ I++ + K+ + L G+L E ++ + RF+
Sbjct: 363 RADTHFLLNIYDQLRNKLIESN----------------KLAGVLYESRNVAKR--RFEYS 404
Query: 258 EALDIIRATSYYSQCLPEGVVSRVSY-LNTMPMDESLVKIVRKYGEKILLRECDKAPK 314
+ + ++ YS E + Y N P E LVK + ++ + ++ R D++P+
Sbjct: 405 KYRPLTPSSKVYSPIEKENPWRVLMYQYNIAPEREVLVKNLYQWRD-VIARRDDESPR 461
>gi|317152629|ref|YP_004120677.1| 3'-5' exonuclease [Desulfovibrio aespoeensis Aspo-2]
gi|316942880|gb|ADU61931.1| 3'-5' exonuclease [Desulfovibrio aespoeensis Aspo-2]
Length = 203
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 38/207 (18%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQ 62
C Y P+ V TE + T R + +L+G D E +P SL+QLA
Sbjct: 26 CHYEGPVA---VVRTEK-QRTQALREMEGETLLGFDTETRPVFKKGKRPGPPSLIQLA-- 79
Query: 63 PGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST 122
AS V++ ++ +PL + L +L +++K G + D++ L
Sbjct: 80 ------------TASCVYVFQINLLPLCNG---LCDLLADKEVIKTGVAVRDDILGLQKM 124
Query: 123 FCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQC 182
GF + ++D++ I +T L N+ LL +SK QC
Sbjct: 125 -------AGFTP-QQFIDLSDITAAARM---------QTHGLRNMAANLLGFRISKSAQC 167
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIF 209
S+W+ LT +Q YAA DA E++
Sbjct: 168 SNWAKEHLTPQQITYAATDAWISRELY 194
>gi|268532256|ref|XP_002631256.1| C. briggsae CBR-CRN-3 protein [Caenorhabditis briggsae]
Length = 868
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 25/145 (17%)
Query: 80 FLLDLSSIPLPSIWE---LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
F++D P P +W+ +L E F +P+ILK+ D+++L F ++ FD
Sbjct: 321 FIID----PFP-MWDRIGILNEPFTNPNILKVFHGSDNDVLWLQRDFGVHVVNL-FD--- 371
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ K+L K PK SLA + D+ L K+ Q +DW RPL N
Sbjct: 372 ---------TYVAMKKL--KYPK--FSLAYLAFRFADVVLDKQYQLADWRARPLRNAMIN 418
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGN 221
YA D H L+ +++ + ++ Q+G+
Sbjct: 419 YAREDTHYLLYSYDMLREQLLQQGH 443
>gi|414886885|tpg|DAA62899.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
Length = 951
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ HLAR L + +D E Q S +S +L+Q++ Q + +
Sbjct: 146 QLEHLARLLGEERAFAVDTE---QHSIRSFLGYTALMQISTQ--------------NEDY 188
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L + +L+ +F + I K+ D+++L F ++
Sbjct: 189 LID--TIALHDVMGILRPVFANSSICKIFHGADNDILWLQRDF--------------HIY 232
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + +++ K +Q DW RPLT E YA
Sbjct: 233 VVNMFDTAKACEI---LLKPQKSLAYLLEVYCEVTTDKTMQREDWRLRPLTPEMIEYART 289
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCS 224
DAH L+ I N ++ K + S
Sbjct: 290 DAHYLLYIANCLASELHAKAYTSS 313
>gi|121711303|ref|XP_001273267.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus clavatus
NRRL 1]
gi|119401418|gb|EAW11841.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus clavatus
NRRL 1]
Length = 391
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H S E E +A+ ++G D EWKPQ + + VSL+Q+A
Sbjct: 121 KDIIVHYCKSLEKSE--EVAKYFLNDKVIGFDMEWKPQATKSAGIRSNVSLIQIA----- 173
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
S+ + L + + L+++ SP+I+K+G K D L
Sbjct: 174 ----NSERIALFQIALFKPAKKAEDFVAASLRKILESPEIMKVGVTIKADCTRLRKY--- 226
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSKE--LQC 182
+G D L+++ +Y + + + KL K SL++ +E + L K+ ++C
Sbjct: 227 ----LGID-TRGTLELSHLYKLVKYSESNPKLINKRPVSLSDQVEEHFGMPLEKDGNVRC 281
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
S+W+ L Q YAA D + +F+ K
Sbjct: 282 SNWAT-ALNYRQVQYAATDPYACFRLFDTMNTK 313
>gi|365985620|ref|XP_003669642.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
gi|343768411|emb|CCD24399.1| hypothetical protein NDAI_0D00850 [Naumovozyma dairenensis CBS 421]
Length = 790
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ ++ L S + L E F +P I K+ D+I+L D+G L I S
Sbjct: 286 VDTLKLRSHLQPLNEPFTNPQITKVLHGAFMDIIWLQR-------DLG-------LYIVS 331
Query: 144 IYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+++ H + LG PK SLA + ++ + SK+ Q +DW RPL++ +YA D
Sbjct: 332 LFDTFHASRALG--FPK--NSLAYLLEKFSNFKTSKKYQMADWRIRPLSKAMNSYARSDT 387
Query: 203 HCLIEIFNIFQVKVAQKGNSCSSISE 228
H L+ IF+ + K+ Q G + E
Sbjct: 388 HFLLNIFDQMRNKLVQDGKLAGVLKE 413
>gi|220917449|ref|YP_002492753.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955303|gb|ACL65687.1| 3'-5' exonuclease [Anaeromyxobacter dehalogenans 2CP-1]
Length = 288
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L + L+ + + + LSK Q SDW RPLT +Q YA++D H L+ +F++
Sbjct: 111 ARRLGRPGLGLSALVEAHFGVRLSKAFQRSDWGRRPLTPDQLAYASLDTHFLLPLFDLLT 170
Query: 214 VKVAQKG 220
++A +G
Sbjct: 171 GELATRG 177
>gi|348510943|ref|XP_003443004.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Oreochromis niloticus]
Length = 640
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 82/190 (43%), Gaps = 30/190 (15%)
Query: 25 LARALSQSSLVGLDAEW--KPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLL 82
+ + LS ++G D EW S + VSLLQ+A G +V LL
Sbjct: 113 MQKELSVFPVLGFDCEWVKTSAVSAKGKAAVVSLLQMASYSGL----------CILVRLL 162
Query: 83 DLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF-CSQGCDIGFDRVEPYLDI 141
S P L+ E+ +P ILK+G +D L+ + S C + +
Sbjct: 163 PFRSSQQPFPHSLM-EVLRNPHILKVGVGCYEDGKRLTRDYGLSLTCTVDLRHLALRQKQ 221
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAA 199
TS+ N L SL ++ ++L ISL K E++CSDW LT+EQ YAA
Sbjct: 222 TSVSNGL--------------SLKSLAADVLKISLDKSPEVRCSDWEADQLTQEQMTYAA 267
Query: 200 IDAHCLIEIF 209
DA I +F
Sbjct: 268 RDAQVSIALF 277
>gi|157133260|ref|XP_001656205.1| 3-5 exonuclease [Aedes aegypti]
gi|108870910|gb|EAT35135.1| AAEL012690-PA [Aedes aegypti]
Length = 771
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 43/206 (20%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G D EW + Q V+LLQLA G +++ L ++ IP P +
Sbjct: 71 VLGFDCEWV---NEQGKRHPVALLQLATHRGL----------CALIRLCEMKRIP-PELG 116
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
ELL + P I+K+G +D L + +VE LD+ + + +
Sbjct: 117 ELLND----PAIVKVGVGPLEDAKLLRHDYNL--------KVESTLDLRHLAD-----RC 159
Query: 154 GRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
G P +A + ++ L + L K ++ S+W N LTE Q YAA DAH +E+F
Sbjct: 160 GVPGPY---GMAKLAEKTLGVKLDKHWRIRASNWENAQLTERQIQYAASDAHVAVELFRT 216
Query: 212 FQVKV-------AQKGNSCSSISELD 230
F K +QK +I+EL+
Sbjct: 217 FAKKAVPRSLFSSQKSWLTKTINELE 242
>gi|2645409|gb|AAB87366.1| homolog of human Werners syndrome protein [Mus musculus]
Length = 643
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCV----------SENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ I+
Sbjct: 206 YAATDAYAGFIIY 218
>gi|221485391|gb|EEE23672.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L + +P ILK+ D+I+L F + N
Sbjct: 526 VLNTITANPKILKIFHGADSDIIWLQRDFS-----------------VYVVNMFDTCVAA 568
Query: 155 RKLP-KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLAN+ + + +K+ Q +DW RPLT E + YA D H L IF++ +
Sbjct: 569 RALAVPGGASLANLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMK 628
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDI 262
++ K +++S ++ D G LE + G + + F + + D+
Sbjct: 629 NQLLSKPELGAALSPSAVTDFD----GTLEVTEAGKQIMMFTMERSRDV 673
>gi|145546781|ref|XP_001459073.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426896|emb|CAK91676.1| unnamed protein product [Paramecium tetraurelia]
Length = 403
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 35 VGLDAE---WKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
G+D E PQ S +V LLQ+A P+ +F+L+ +++
Sbjct: 247 TGIDTESFQEIPQTKFTSRMNKVCLLQIAL-------PQK-------IFILNSANLTSSC 292
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
++ + + + LK+G +QD + L + G + ++++ ++
Sbjct: 293 KYQQFLVKYATSNALKIGQNLRQDFLSLLGQIRASGVQLN-----QIIELSELF------ 341
Query: 152 QLGRKLPKETKS-LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+K P+E K+ L+ C +LL L K Q S+W RPL Q +YAA+DA+ + ++N
Sbjct: 342 --QQKFPQEKKTNLSFQCSKLLGKELDKVEQISNWQRRPLRNAQIHYAALDAYICLHLYN 399
Query: 211 IFQ 213
+++
Sbjct: 400 LYK 402
>gi|3851581|gb|AAC72359.1| Wrn protein [Mus musculus]
Length = 988
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCVS----------ENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVAN--------EKLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|307104422|gb|EFN52676.1| hypothetical protein CHLNCDRAFT_54323 [Chlorella variabilis]
Length = 529
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 31 QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL- 89
Q S V +D EWKP+ RV+L+QLA +A+V L+ + +
Sbjct: 153 QDSCVAIDLEWKPEGWAGGGPTRVALMQLA--------------SATVAVLVRVCRLGFR 198
Query: 90 --PSIWELLKELFVSPDILKLGFKF-KQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
PS L+ PD+ +GF + D + + TF +G F R +LD+ +
Sbjct: 199 MPPS----LRAFLSDPDLTFIGFSWDSSDEVKMRQTF-GEGRRELFPR---FLDLQQVGA 250
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHC 204
L + G LA + K +L +L K ++ S+W R L+ Q Y A+DA
Sbjct: 251 SLGYHGFG---------LAALTKRVLGFALPKCRKVTMSNWEARQLSARQVQYGALDAVV 301
Query: 205 LIEIFNIFQVKVAQKGNSCSSISEL 229
IF ++ A ++C++ ++
Sbjct: 302 TGHIFRGLRLWHASP-SACTACRQM 325
>gi|221506253|gb|EEE31888.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L + +P ILK+ D+I+L F + N
Sbjct: 526 VLNTITANPKILKIFHGADSDIIWLQRDFS-----------------VYVVNMFDTCVAA 568
Query: 155 RKLP-KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLAN+ + + +K+ Q +DW RPLT E + YA D H L IF++ +
Sbjct: 569 RALAVPGGASLANLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMK 628
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDI 262
++ K +++S ++ D G LE + G + + F + + D+
Sbjct: 629 NQLLSKPELGAALSPSAVTDFD----GTLEVTEAGKQIMMFTMERSRDV 673
>gi|74227079|dbj|BAE38334.1| unnamed protein product [Mus musculus]
Length = 789
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 45/193 (23%)
Query: 25 LARALSQSSLVGLDAEWKP-----QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
++ LS +VG D EW P +RS RV+++QL E+ +
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKRS------RVAVIQLCVS----------ENKCYLF 106
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+ +S P + LK L + I K G + D L F D+ ++E ++
Sbjct: 107 HISSMSVFP-----QGLKMLLENKSIKKAGVGIEGDQWKLLRDF-----DV---KLESFV 153
Query: 140 DITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKN 196
++T + N KL ET SL + K +L L K ++CS+WSN PLTE+QK
Sbjct: 154 ELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKL 205
Query: 197 YAAIDAHCLIEIF 209
YAA DA+ + I+
Sbjct: 206 YAATDAYAGLIIY 218
>gi|396458114|ref|XP_003833670.1| hypothetical protein LEMA_P064310.1 [Leptosphaeria maculans JN3]
gi|312210218|emb|CBX90305.1| hypothetical protein LEMA_P064310.1 [Leptosphaeria maculans JN3]
Length = 799
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 50/239 (20%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKIH S + E +A+ ++G D EWKP S VSL+QLAC+
Sbjct: 227 LKIHYCKSKDVAE--RVAKRFLDQKVLGFDIEWKPFGIPSSIKQNVSLIQLACE------ 278
Query: 69 PESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFC 124
+ L +S ++ EL LK + SPDI K+G K D L+
Sbjct: 279 --------DRIALFHISLFEGTAVEELMPPSLKAVLESPDIYKVGVAIKGDFSRLARYLG 330
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHH-----KQLGRKLPKETKSLANICKELLDISL--- 176
Q + +++ ++N + + KQ+ +L LA + L + L
Sbjct: 331 IQARGV--------FELSRLHNLVQYYEADPKQVNNRL----VGLAAQVHQHLQLPLYKG 378
Query: 177 ---------SKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
S ++ SDWS PL Q +YAA DA+ +++ + K AQ + S+I
Sbjct: 379 EPLDDDPETSSSVRESDWS-LPLGFSQIHYAAADAYAGFRLYDALERKRAQLKPTPSAI 436
>gi|189194651|ref|XP_001933664.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979228|gb|EDU45854.1| exosome complex exonuclease Rrp [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 786
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P ILK+ D+++L D+G L I +++ H
Sbjct: 268 ECLNEVFADPSILKVLHGAFMDIVWLQR-------DLG-------LYIVGLFDTFH---A 310
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L + SLA + + ++ K+ Q +DW RPL++E YA D H L+ IF+ +
Sbjct: 311 ARALGYQAASLAYLLELHVNFKAQKQYQLADWRQRPLSKELFEYARADTHFLLYIFDNMR 370
Query: 214 VKVAQKGN 221
++ K +
Sbjct: 371 NELVNKSD 378
>gi|237835553|ref|XP_002367074.1| exosome component 10, putative [Toxoplasma gondii ME49]
gi|211964738|gb|EEA99933.1| exosome component 10, putative [Toxoplasma gondii ME49]
Length = 1353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L + +P ILK+ D+I+L F + N
Sbjct: 526 VLNTITANPKILKIFHGADSDIIWLQRDFS-----------------VYVVNMFDTCVAA 568
Query: 155 RKLP-KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLAN+ + + +K+ Q +DW RPLT E + YA D H L IF++ +
Sbjct: 569 RALAVPGGASLANLLQTYCHVEANKQYQLADWRRRPLTPEMETYARSDTHYLPFIFDVMK 628
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDI 262
++ K +++S ++ D G LE + G + + F + + D+
Sbjct: 629 NQLLSKPELGAALSPSAVTDFD----GTLEVTEAGKQIMMFTMERSRDV 673
>gi|392566464|gb|EIW59640.1| hypothetical protein TRAVEDRAFT_147720 [Trametes versicolor
FP-101664 SS1]
Length = 850
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 36/192 (18%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S EF + + + + +D E+ R+ + F V L+Q++ + E+D
Sbjct: 250 SAEFAVMLEQMRGAREIAVDLEYHSYRTF-AGF--VCLMQISTR-------EAD------ 293
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
F++D +I L E L E+F PD++K+ + D+++L F
Sbjct: 294 -FVVD--TIALRDEMEELNEVFTDPDVVKVFHGAESDIVWLQQDFN-------------- 336
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
L + ++++ H ++ P+ LA + + D + K Q +DW RPL EE YA
Sbjct: 337 LYVVNLFDTYHASKV-LDFPRH--GLATLLEMYCDFTADKRYQLADWRIRPLPEEMLQYA 393
Query: 199 AIDAHCLIEIFN 210
D H L+ I++
Sbjct: 394 RSDTHFLLFIYD 405
>gi|448116900|ref|XP_004203126.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359383994|emb|CCE78698.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 757
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 7 KPLKIHLVTSTESPE-FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGP 65
KP K T +S E + L S+ + +D E RS+ + V L+Q+
Sbjct: 220 KPWKETSATWVDSKEGLLSMVNELKNSTEIAVDLEHHDYRSY---YGLVCLMQI------ 270
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
SN +L+D ++ L E++ E+F +P ILK+ D+I+L
Sbjct: 271 --------SNRQNDWLVD--TLALRDDLEVMNEIFTNPQILKVFHGAFMDIIWLQR---- 316
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
D+G L I S+++ H +KL SLA + + SK+ Q +DW
Sbjct: 317 ---DLG-------LYIVSLFDTYH---AAKKLGLSKFSLAYLLETFAKFKTSKKYQLADW 363
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
RPL+ K YA D H L+ I++ + K+
Sbjct: 364 RLRPLSPAMKAYARSDTHFLLYIYDQMRNKL 394
>gi|324501716|gb|ADY40761.1| Exosome component 10 [Ascaris suum]
Length = 892
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 88 PLPSIW---ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
P P IW ++L E F +P+ILK+ + D+ +L F G + + +
Sbjct: 325 PFP-IWNDMQILNEPFTNPNILKVFHGSEYDVQWLQRDF---GIYV--------VGMFDT 372
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+ +H + SLA++ + + +++L KELQ +DW RPLT YA D H
Sbjct: 373 FCAMHVLNFAKY------SLAHLVQSICNVTLDKELQKADWRVRPLTTAHIEYARSDTHY 426
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKP 245
L+ ++ + ++ +GN +++ + L + + +KP
Sbjct: 427 LLYCYDTLRQRLINEGNESNNLLRSTYNESALICRTVYKKP 467
>gi|367017047|ref|XP_003683022.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
gi|359750685|emb|CCE93811.1| hypothetical protein TDEL_0G04440 [Torulaspora delbrueckii]
Length = 735
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 21/150 (14%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L ++L E+F +P ILK+ D+I+L D+G L
Sbjct: 261 YLID--TIALRDDLQILNEVFANPKILKVFHGAFMDIIWLQR-------DLG-------L 304
Query: 140 DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+ S+++ H + +G LP+ SLA + ++ + SK+ Q +DW RPL++ YA
Sbjct: 305 YVVSLFDTFHASRAIG--LPRH--SLAYLLEKFANFKTSKKYQLADWRLRPLSKAMNAYA 360
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
D H L+ I++ + + ++ ++E
Sbjct: 361 RADTHFLLNIYDQLRNTLIEQNKLAGVLAE 390
>gi|293334477|ref|NP_001168997.1| uncharacterized protein LOC100382828 [Zea mays]
gi|223974363|gb|ACN31369.1| unknown [Zea mays]
Length = 98
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
T L+ + KE+L L+K + S+W RPLT+ QK YAA+DA L+ IF+ + AQ G
Sbjct: 13 TGGLSGLSKEILGAGLNKTRRNSNWEQRPLTQNQKEYAALDAVVLVHIFHEHMRRQAQFG 72
Query: 221 NSCSSISELDS 231
S S E S
Sbjct: 73 VSEGSRVEWRS 83
>gi|390941796|ref|YP_006405557.1| ribonuclease D [Belliella baltica DSM 15883]
gi|390415224|gb|AFL82802.1| ribonuclease D [Belliella baltica DSM 15883]
Length = 200
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
+I LV S + + + LS L+G D E KP R N+ VSLLQL
Sbjct: 22 EIVLVNSMDQVQ--EVVDELSMHDLIGFDTETKPAFRKGVYNY--VSLLQL--------- 68
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYL---SSTFCS 125
S + V FL+ L+ I LP + ++++ P +LK+G DL L + F
Sbjct: 69 -----STSDVAFLIRLNEIGLP---KEIQKIMEDPSVLKIGAAVLDDLRALRKHAEDFTP 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ D+ + + +G + N+ +L+I +SK Q S+W
Sbjct: 121 AS----------FFDLNDQLKKVGFQNIGVR---------NLAAMVLEIRISKSEQVSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE+Q YAA DA +EI+ Q
Sbjct: 162 EAPTLTEKQMLYAATDAWVCLEIYKKLQ 189
>gi|427383689|ref|ZP_18880409.1| hypothetical protein HMPREF9447_01442 [Bacteroides oleiciplenus YIT
12058]
gi|425728394|gb|EKU91252.1| hypothetical protein HMPREF9447_01442 [Bacteroides oleiciplenus YIT
12058]
Length = 215
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L Q L+G+D+E +P + + +V+LLQ++
Sbjct: 21 PGRIHVVQTPWEAE--KAVTYLKQYPLLGIDSETRPSFTKGQSH-KVALLQVSS------ 71
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
E D +F L+ + + LP I L SP + K+G + D + L + F
Sbjct: 72 --EED----CFLFRLNQTGLTLPII-----SLLESPSVTKIGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + KSL I L +SK + S+W
Sbjct: 121 RAC-------------------IELQEYVRMFGIQDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAEHLTEPQKQYAATDAWACLNIYNRLQ 189
>gi|363750290|ref|XP_003645362.1| hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888996|gb|AET38545.1| Hypothetical protein Ecym_3030 [Eremothecium cymbalariae
DBVPG#7215]
Length = 747
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 38/177 (21%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ +D E RS+ + V L+Q++ + ESD +L+D +I L +
Sbjct: 237 IAVDLEHHDYRSY---YGLVCLMQISTR-------ESD-------WLVD--TIALRQDLQ 277
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQL 153
+L E+F P ILK+ D+I+L D+G L + S+++ H + L
Sbjct: 278 VLNEIFTDPSILKVFHGAFMDIIWLQR-------DLG-------LYVVSLFDTYHASRAL 323
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
G PK SLA + + + SK+ Q +DW RPL++ K YA D H L+ I++
Sbjct: 324 G--FPKH--SLAYLLETFANFKTSKKYQLADWRIRPLSKPMKTYARADTHFLLNIYD 376
>gi|240278412|gb|EER41918.1| 3'-5' exonuclease/helicase [Ajellomyces capsulatus H143]
Length = 947
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 35/219 (15%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S Q + VS++QLA
Sbjct: 702 KEITVHYCTSLQTME--RVAKLFLSETIVGLDVEWKAQASAQDSLVDNVSVIQLA----- 754
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
S E A +F L L + P S+ L LK + SPDI+K+G + D
Sbjct: 755 -----SKERIA--IFHLALFN-PANSLQHLLSPTLKRILESPDIVKVGVAIRAD------ 800
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--E 179
C++ R +++ ++ + H + + K +LA +E L + L K E
Sbjct: 801 --CTRLYKFLGIRTNNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVEEHLGLPLDKDPE 858
Query: 180 LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
++C WS + L Q Y + +++F++ + K Q
Sbjct: 859 IRCGGWSKK-LNYRQVQY----PYAALQLFHVLEAKRLQ 892
>gi|329956986|ref|ZP_08297554.1| 3'-5' exonuclease [Bacteroides clarus YIT 12056]
gi|328523743|gb|EGF50835.1| 3'-5' exonuclease [Bacteroides clarus YIT 12056]
Length = 210
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 43/209 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSH-QSNFPRVSLLQLACQPGPR 66
P +IH++ + + E L Q S++G+D+E +P + QS+ +V+LLQ++ +
Sbjct: 21 PGQIHVIQTPQEAE--RAVAYLKQCSILGIDSETRPSFTKGQSH--KVALLQISSE---- 72
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 --------EHCFLFRLNLTGLTLPIIM-----LLENPGVTKVGLSLRDDFMMLHKRAPFE 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
+ C + ++ R + KSL I L +SK + S+
Sbjct: 120 QRAC-------------------IELQEYVRTFGIQDKSLQKIYAILFKEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
W LT Q+ YAA DA + I+N Q
Sbjct: 161 WEAEVLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|237721388|ref|ZP_04551869.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449184|gb|EEO54975.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 219
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +I+++ S E L +++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAETE--KAVAYLQSRAVIGIDSETRPSFTKGQSH-KVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 -------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q C + + R+ + KSL I L +SK + S+W
Sbjct: 121 QSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 162 EADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|357601922|gb|EHJ63190.1| 3-5 exonuclease [Danaus plexippus]
Length = 382
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 7 KPLKIHLVTSTESPE--FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPG 64
K L I++VT+ + + R + +G D EW + N ++LLQL+ G
Sbjct: 38 KNLDINIVTTKAQCDEVVNEMRRRSTLHQAIGFDCEWVTE---NGNRQPIALLQLSTFDG 94
Query: 65 PRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFC 124
++ L L +P+ LKEL +I K+G D YL +
Sbjct: 95 F----------CGLLRLNLLKEVPMS-----LKELLEDKNIYKVGVAPIDDAKYLIQDYS 139
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQC 182
V+ LD+ I H G LA + L I L K ++C
Sbjct: 140 IY--------VKSTLDLRHIVELTGHTAGG---------LAALANTYLGIVLDKNWRIRC 182
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIF 209
SDW+ LTE Q +YAA DA+ I+IF
Sbjct: 183 SDWAAEELTERQIHYAATDAYVAIKIF 209
>gi|367031894|ref|XP_003665230.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
gi|347012501|gb|AEO59985.1| hypothetical protein MYCTH_2308740 [Myceliophthora thermophila ATCC
42464]
Length = 860
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E+L E+F P I+K+ D+I+L D+G L I +++
Sbjct: 283 VPWRHKLEVLNEVFADPKIVKVLHGAFMDVIWLQR-------DLG-------LYIVGLFD 328
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ L KSLA + K+ D K+ Q +DW RPL EE YA D H L+
Sbjct: 329 TFYASDT---LGYAGKSLAFLLKKFADFDADKKYQLADWRIRPLPEEMFYYARSDTHFLL 385
Query: 207 EIFNIFQVKVAQ 218
I+++ + ++A+
Sbjct: 386 YIYDMLRNELAE 397
>gi|218192123|gb|EEC74550.1| hypothetical protein OsI_10088 [Oryza sativa Indica Group]
Length = 599
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
LKE F P K+ +D+++L F C++ FD Q R
Sbjct: 209 LKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNL-FDT----------------GQASR 251
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ + ++ +KE Q +DW +RPL++E YA D H L+ ++++ +++
Sbjct: 252 VLQMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTHYLLYMYDLMRLR 311
Query: 216 VAQKGNSCSSI 226
+ ++ S + +
Sbjct: 312 LQKESTSDNDL 322
>gi|115450833|ref|NP_001049017.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|108706273|gb|ABF94068.1| 3'-5' exonuclease family protein, expressed [Oryza sativa Japonica
Group]
gi|113547488|dbj|BAF10931.1| Os03g0157800 [Oryza sativa Japonica Group]
gi|215695202|dbj|BAG90393.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624215|gb|EEE58347.1| hypothetical protein OsJ_09469 [Oryza sativa Japonica Group]
Length = 600
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
LKE F P K+ +D+++L F C++ FD Q R
Sbjct: 210 LKEHFKDPTKRKVMHGADRDIMWLQRDFHIYVCNL-FDT----------------GQASR 252
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ + ++ +KE Q +DW +RPL++E YA D H L+ ++++ +++
Sbjct: 253 VLQMERNSLEHLLRHFCGVTANKEYQNADWRSRPLSDEMIKYAREDTHYLLYMYDLMRLR 312
Query: 216 VAQKGNSCSSI 226
+ ++ S + +
Sbjct: 313 LQKESTSDNDL 323
>gi|294868076|ref|XP_002765369.1| hypothetical protein Pmar_PMAR002368 [Perkinsus marinus ATCC 50983]
gi|239865388|gb|EEQ98086.1| hypothetical protein Pmar_PMAR002368 [Perkinsus marinus ATCC 50983]
Length = 1005
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 11 IHLVTSTESPEFTHL-ARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+HL+T+ E L + ++ +++GLD+EW S+ +L PG
Sbjct: 448 VHLITTV--SELKQLISEWEAERTIIGLDSEW-------------SIFRLVLDPGCNQAD 492
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
+ + V+L+D+ + I E+ + L S +I+ +GF DL L S+ +G
Sbjct: 493 LVQLATSDNVYLVDIYAGEEGLIDEIGR-LVESNNIIVVGFGIAGDLRVLRSSGM-EGTR 550
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
G +D+ + + + G K + L + K L LSK ++ S+W RP
Sbjct: 551 GGVSSPHRIVDLNDLVDGYLPSRKGSS--KHQRGLTEVVKYFLGKPLSKVMRLSNWRRRP 608
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKV 216
L+ Q YA++DA L++ Q +
Sbjct: 609 LSYRQVEYASLDAIVLLKCIEKIQSSI 635
>gi|424852269|ref|ZP_18276666.1| ribonuclease III [Rhodococcus opacus PD630]
gi|356666934|gb|EHI47005.1| ribonuclease III [Rhodococcus opacus PD630]
Length = 429
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELDEQGKSGWAAQEFEHIRL 216
>gi|297739148|emb|CBI28799.3| unnamed protein product [Vitis vinifera]
Length = 935
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 38/205 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ LA LS+ + +D E Q S +S +L+Q++ Q N + +
Sbjct: 121 QLKELADVLSKQRVFAVDTE---QHSLRSFLGFTALIQISTQ-----NED---------Y 163
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L ++L+ +F +P I K+ D+++L F ++
Sbjct: 164 LVD--TIALHDTLDVLQPVFANPSICKVFHGADNDVLWLQRDF--------------HIY 207
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K KSLA + + ++ +K LQ DW RPL+ E YA
Sbjct: 208 VVNLFDTAKACEV---LSKPQKSLAYLLETYCGVATNKLLQREDWRQRPLSVEMLEYAQT 264
Query: 201 DAHCLIEIFN--IFQVKVAQKGNSC 223
DAH L+ I N I +++ NSC
Sbjct: 265 DAHYLLYIANCLIAELRQHDSENSC 289
>gi|342319925|gb|EGU11870.1| Hypothetical Protein RTG_02115 [Rhodotorula glutinis ATCC 204091]
Length = 966
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E F +P+ +K+ K D+++L F L I +++ H +
Sbjct: 342 ESLNEFFTNPEWIKVLHGAKSDIVWLQRDFG--------------LYIVGLFDTYHATHV 387
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L SLA++ D K Q +DW RPL +E YA D H L+ I++ +
Sbjct: 388 ---LGYAQHSLASLLDMYTDFEPDKRYQLADWRIRPLPKEMLQYARSDTHYLLSIYDHLR 444
Query: 214 VKVAQKGNSC 223
+ + KG +
Sbjct: 445 LALHAKGAAS 454
>gi|167765134|ref|ZP_02437247.1| hypothetical protein BACSTE_03520 [Bacteroides stercoris ATCC
43183]
gi|167696762|gb|EDS13341.1| 3'-5' exonuclease [Bacteroides stercoris ATCC 43183]
Length = 210
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + + E L + S++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPQEAE--RAVAYLKKCSILGIDSETRPSFT-KGQSHKVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLETPAVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+GC + ++ R + +SL I L +SK + S+W
Sbjct: 121 RGC-------------------IELQEYVRTFGIQDRSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT Q+ YAA DA + I+N Q
Sbjct: 162 EADVLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|196007028|ref|XP_002113380.1| hypothetical protein TRIADDRAFT_27020 [Trichoplax adhaerens]
gi|190583784|gb|EDV23854.1| hypothetical protein TRIADDRAFT_27020, partial [Trichoplax
adhaerens]
Length = 535
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 96/238 (40%), Gaps = 43/238 (18%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TE E L L + +D E RS+Q V L+Q++ +
Sbjct: 243 TEKDELKDLLETLKSVTEFAVDLEHHSYRSYQG---FVCLMQISTRDAD----------- 288
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
+V L L S +W L E+F P I+K+ D+I+L F
Sbjct: 289 YIVDTLALRS----ELWTL-NEVFSDPKIIKILHGADSDIIWLQRDFA------------ 331
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ N Q R L SL+ + + +++ +K LQ +DW RPL +E
Sbjct: 332 -----IYVVNMFDTGQAARLLQFPRFSLSYLLLKYCNVTANKGLQLADWRIRPLPQEMVQ 386
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL---EKPDIGNKT 251
YA D H L+ IF++ ++ N+ +S+ +L SN D K L EKP K+
Sbjct: 387 YAREDTHYLLYIFDVLTNELM---NASTSV-DLLKSNFDRSKKICLRTYEKPVFNKKS 440
>gi|345888291|ref|ZP_08839391.1| hypothetical protein HMPREF0178_02165 [Bilophila sp. 4_1_30]
gi|345040888|gb|EGW45105.1| hypothetical protein HMPREF0178_02165 [Bilophila sp. 4_1_30]
Length = 176
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 46/202 (22%)
Query: 24 HLARALS---QSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ARAL+ + +L+G D E +P ++P SL+QLA + +V
Sbjct: 16 EMARALNFLKKETLLGFDTESRPSFKKGKSYP-TSLIQLA--------------GSELVV 60
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSS--TFCSQGCDIGFDRVEPY 138
L+ L+ P L L P I+K G + D+ L F G
Sbjct: 61 LIRLNLTPFCGA---LAGLLADPGIIKAGVAIRDDIRALQKLHEFTPGGLA--------- 108
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
D+ + KQ G K + L + +L+ +SK QCS+W+ + LT +Q YA
Sbjct: 109 -DLAEM-----AKQRGIK----AQGLRTLAAQLMGCRISKAAQCSNWAKKTLTPQQVRYA 158
Query: 199 AIDAHCLIEIFNIFQVKVAQKG 220
A DA EI+ +++A++G
Sbjct: 159 ATDAWIGREIY----LRMAEQG 176
>gi|340380967|ref|XP_003388993.1| PREDICTED: exosome component 10-like [Amphimedon queenslandica]
Length = 724
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
LL E+F +P+I+K+ D+ +L F I N Q
Sbjct: 294 LLNEVFTNPNIIKVMHGADWDIPWLQRDFG-----------------VYIVNLFDTGQAC 336
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L SLA + ++ +K+ Q +DW RPL E+ YA D H L+ +++ +
Sbjct: 337 RTLGLPRYSLAFLLSYCCGVTANKQYQLADWRIRPLPEDMIKYAREDTHYLLYVYDRLRN 396
Query: 215 KVAQKGNSCSS-ISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALD 261
++ ++ NS S+ I+ + ++ ++ LK + +KP I +++ KLC+ +
Sbjct: 397 ELIRRSNSQSNLINAVLKNSKEISLK-VYKKPAINDESY-LKLCKKFN 442
>gi|345478840|ref|XP_001599044.2| PREDICTED: exosome component 10 [Nasonia vitripennis]
Length = 1163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D ++ L S +L E+F P ILK+ D+++L D+G
Sbjct: 686 YLID--TLTLRSELHVLNEIFTKPSILKVFHGADSDILWLQR-------DLGL------- 729
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I N Q ++L SL+ + K +IS +K Q +DW RPL EE YA
Sbjct: 730 ---YIVNMFDTYQAAKQLGLPFLSLSYLLKTHCEISANKHFQLADWRIRPLPEELMKYAR 786
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSI 226
D H L+ I +I + N S+I
Sbjct: 787 EDTHYLLYIKDILSNALIDSANGQSNI 813
>gi|156101427|ref|XP_001616407.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax
Sal-1]
gi|148805281|gb|EDL46680.1| 3'-5' exonuclease domain containing protein [Plasmodium vivax]
Length = 752
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
KSL+++C++ L +L+K+LQ S+WS RPL E Q +YAA DA+ LI
Sbjct: 670 KSLSHLCQKFLGKNLNKQLQLSNWSRRPLMESQIHYAATDAYVLI 714
>gi|294790936|ref|ZP_06756094.1| putative ribonuclease D [Scardovia inopinata F0304]
gi|294458833|gb|EFG27186.1| putative ribonuclease D [Scardovia inopinata F0304]
Length = 433
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + ++ L ++L+KE +DWS RPL + +NYAA+D LIE+ N ++ + G
Sbjct: 129 LAAVTEKYLGLTLAKEHSAADWSYRPLNRDMRNYAALDVEVLIELRNTLSAELRRSG 185
>gi|253989912|ref|YP_003041268.1| ribonuclease d (rnase d) [Photorhabdus asymbiotica]
gi|211638250|emb|CAR66874.1| ribonuclease d (rnase d) [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781362|emb|CAQ84524.1| ribonuclease d (rnase d) [Photorhabdus asymbiotica]
Length = 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 38/195 (19%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ LD E+ R++ +P++ L+QL D S++ L++++ W+
Sbjct: 25 IALDTEFVRTRTY---YPQLGLIQL-----------YDGEQLSLIDPLNITN------WQ 64
Query: 95 LLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+EL +P ILK +DL ++L++ C EP +D + + H
Sbjct: 65 PFRELITNPQILKFLHAGSEDLEVFLNAFQCLP---------EPMIDTQVLAAFIGHPL- 114
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ A + E + + L K +DW RPL+E+Q YAA D + L+ + +I
Sbjct: 115 -------SCGFAALVAEYIHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADILI 167
Query: 214 VKVAQKGNSCSSISE 228
Q G ++I E
Sbjct: 168 TATTQAGYMEAAIGE 182
>gi|336320604|ref|YP_004600572.1| 3'-5' exonuclease [[Cellvibrio] gilvus ATCC 13127]
gi|336104185|gb|AEI12004.1| 3'-5' exonuclease [[Cellvibrio] gilvus ATCC 13127]
Length = 443
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E LA + + L + L+KE DWS RPL E YAA+D L+E+ +
Sbjct: 158 ARLLGMERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPAEWLRYAALDVEVLVEVRQVLA 217
Query: 214 VKVAQKGNSCSSISELDS 231
++A G + + E ++
Sbjct: 218 ERLAVAGKAQWAAQEFEA 235
>gi|320352196|ref|YP_004193535.1| 3'-5' exonuclease [Desulfobulbus propionicus DSM 2032]
gi|320120698|gb|ADW16244.1| 3'-5' exonuclease [Desulfobulbus propionicus DSM 2032]
Length = 210
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 45/208 (21%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQP 63
+R P +HLV ++E + A LS+++L+G D E +P R Q P SLLQLA
Sbjct: 27 WRGP--VHLVRTSE--DMALAAAHLSRAALLGFDTETRPAFRKGQKFSP--SLLQLATD- 79
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
SVV+L L I L + L+ + P I+K G DL L
Sbjct: 80 -------------SVVYLFQLQQIGLA---QPLRAILSDPTIIKAGVAPDFDLRSLGE-- 121
Query: 124 CSQGCDIGFDRVEP--YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQ 181
+ EP ++D+ ++ R+ L + + + +SK +
Sbjct: 122 --------LEPFEPDGFVDLA---------RMARRRGVHNHGLRGLAALVCGVRISKSAR 164
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
++W+N LT +Q YAA DA EI+
Sbjct: 165 TTNWANAELTPQQIRYAATDAWIGREIY 192
>gi|94987515|ref|YP_595448.1| ribonuclease D [Lawsonia intracellularis PHE/MN1-00]
gi|442556368|ref|YP_007366193.1| 3'-5' exonuclease domain protein [Lawsonia intracellularis N343]
gi|94731764|emb|CAJ55127.1| Ribonuclease D [Lawsonia intracellularis PHE/MN1-00]
gi|441493815|gb|AGC50509.1| 3'-5' exonuclease domain protein [Lawsonia intracellularis N343]
Length = 198
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 4 TYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
TY+ +K V TE+ E L +++G D E +P ++P +L+QLA
Sbjct: 24 TYKGNIK---VVQTEN-ELRDALDLLKDETVLGFDTEARPSFKKGKSYP-TALVQLA--- 75
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
++ V L+ LS +PL ELL + I+K G +D+ L
Sbjct: 76 -----------SSQHVILIRLSKVPLG---ELLVNILSCAKIIKAGVAIHEDIRLLQKLH 121
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
+ E +DI ++ R+L + + L + +L +SK +QCS
Sbjct: 122 PFEA--------EGIIDIA---------EMARRLQLKAQGLRTLAANILGCRVSKAVQCS 164
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIF 209
+W + L+ +Q YAA DA E++
Sbjct: 165 NWEKKELSPQQVLYAATDAWVGRELY 190
>gi|346227088|ref|ZP_08848230.1| 3'-5' exonuclease [Anaerophaga thermohalophila DSM 12881]
gi|346227138|ref|ZP_08848280.1| 3'-5' exonuclease [Anaerophaga thermohalophila DSM 12881]
Length = 192
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 14 VTSTESP-EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V E P + TH+ L ++G D E KP + V+LLQL+ +
Sbjct: 22 VNVIEDPKQITHVVEKLRNERIIGFDTETKPSFKKGVSHD-VALLQLSTEE--------- 71
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGCDI 130
+ +F L+++ L +L +P I K+G + DL L + F +G
Sbjct: 72 ---EAFLFRLNMTGFNGA-----LTQLLSNPGIKKVGVGIRDDLRGLQHLNNFTPEG--- 120
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
++DI ++L K E SL ++ LL I +SK + S+W L
Sbjct: 121 -------FIDI---------QELAPKYGIEVLSLKDLAGLLLGIRISKRQRLSNWEADSL 164
Query: 191 TEEQKNYAAIDAHCLIEIFN 210
+E Q YAA DA ++I+N
Sbjct: 165 SEGQILYAATDAWVALKIYN 184
>gi|412985693|emb|CCO19139.1| predicted protein [Bathycoccus prasinos]
Length = 686
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 101/268 (37%), Gaps = 66/268 (24%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-------RSHQSNFPRVSLL 57
Y+ P +++ + + R LS S+ +G+D EW + ++ +
Sbjct: 419 YKLPENVNVSFVDDENSLKEMFRVLSASNAIGIDTEWAAKLGGSDSENENEEDEEESKED 478
Query: 58 QLACQPGPRFNPESDESNASVV----------FLLDLSSI----PLPSIWELLKELFVSP 103
P P S + +V FLLDL + P + + L LF +
Sbjct: 479 DAKAAPPPSKRARSSALSETVALLQISSKSDCFLLDLPKLIDDAPSTVLRDTLGALFSND 538
Query: 104 DILKLGFKFKQDLIYLS--STFCSQGCDI------GFDRVEPYLDITSIYNH-------- 147
ILKL F K+D LS +++ Q ++ RVE D S
Sbjct: 539 SILKLVFAGKEDFKRLSQCASYLGQPRNVLDLQHYWRTRVE---DARSARQKKKMMKKNG 595
Query: 148 -----------------------LHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
L K+L R P L+N+C LL L K ++ SD
Sbjct: 596 EEEEEEEEEEENGEGTDRRRKPWLLEKELNRHQPI---GLSNLCSVLLSKPLDKSVRMSD 652
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
WS+RPL+E Q YAA+DA L++ I
Sbjct: 653 WSSRPLSESQTAYAALDAQVLVDCHQIL 680
>gi|383114532|ref|ZP_09935294.1| hypothetical protein BSGG_1297 [Bacteroides sp. D2]
gi|313693762|gb|EFS30597.1| hypothetical protein BSGG_1297 [Bacteroides sp. D2]
Length = 219
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSS-LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +I+++ S T A A QS ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAE---TEKAVAYLQSRPVIGIDSETRPSFTKGQSH-KVALLQISSE---- 72
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 --------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFT 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
Q C + + R+ + KSL I L +SK + S+
Sbjct: 120 QQSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
W L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 161 WEADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|3831454|gb|AAC69936.1| hypothetical protein [Arabidopsis thaliana]
Length = 237
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 12 HLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPES 71
++ TES + LA L++ + +D E Q S +S +L+Q++ E
Sbjct: 55 YVWVETES-QLKELAEILAKEQVFAVDTE---QHSLRSFLGFTALIQISTH-------EE 103
Query: 72 DESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIG 131
D FL+D +I L + +L+ +F P+I K+ D+I+L F
Sbjct: 104 D-------FLVD--TIALHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFH------- 147
Query: 132 FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
+ N + L K +SLA + + + ++ +K LQ DW RPL+
Sbjct: 148 ----------IYVVNMFDTAKACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLS 197
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
EE YA DAH L+ I + ++ Q
Sbjct: 198 EEMVRYARTDAHYLLYIADSLTTELKQ 224
>gi|383860961|ref|XP_003705955.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Megachile rotundata]
Length = 589
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 46/222 (20%)
Query: 6 RKPLKIHL--VTSTESPEFTHLA----RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQL 59
+K LKI L + ++PE A R + ++G D EW N V+LLQL
Sbjct: 43 KKELKITLDKIILADTPEKCDYAIQCIRCNLSNGVLGFDCEW-------VNEGPVTLLQL 95
Query: 60 ACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYL 119
A G + + + IP LKEL S ILK+G +D +
Sbjct: 96 ATFNGV----------CGLFRIGKIGYIPYK-----LKELLASKHILKVGVASYEDAQKI 140
Query: 120 SSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK- 178
+ + GC +V LD+ ++ H++ LP KSLA + E L++ + K
Sbjct: 141 IADY---GC-----KVSGTLDLRTLAEHVN-------LP-SPKSLAAMSLEYLNLEMDKL 184
Query: 179 -ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E++CS+W LT+EQ YAA DA + I++ ++ +K
Sbjct: 185 IEVRCSNWDAGTLTDEQVAYAACDAIASVLIYDQIVQRIKEK 226
>gi|448119348|ref|XP_004203709.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
gi|359384577|emb|CCE78112.1| Piso0_000726 [Millerozyma farinosa CBS 7064]
Length = 756
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
SN +L+D ++ L E+L E+F +P ILK+ D+I+L D+G
Sbjct: 271 SNRQNDWLVD--TLALRDDLEVLNEIFTNPQILKVFHGAFMDIIWLQR-------DLG-- 319
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
L I S+++ H +KL SLA + + SK+ Q +DW RPL+
Sbjct: 320 -----LYIVSLFDTYH---AAKKLGLSKFSLAYLLESFAKFKTSKKYQLADWRLRPLSPA 371
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
K YA D H L+ I++ + K+ + +
Sbjct: 372 MKAYARSDTHFLLYIYDQMRNKLLENDGKLQEV 404
>gi|396483292|ref|XP_003841672.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
gi|312218247|emb|CBX98193.1| similar to exosome complex exonuclease Rrp6 [Leptosphaeria maculans
JN3]
Length = 783
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F +PDI+K+ D+++L D+G L + +++ H
Sbjct: 278 ECLNEVFANPDIIKVLHGAYMDIMWLQR-------DLG-------LYVVGLFDTYH---A 320
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + K+ Q +DW RPL +E YA D H L+ IF+ +
Sbjct: 321 ARSLGYPGASLAYLLDRFIGFKAQKQYQIADWRIRPLGKELFEYARADTHFLLYIFDNMR 380
Query: 214 VKVAQKGN 221
++ +K +
Sbjct: 381 NELVEKSD 388
>gi|212715679|ref|ZP_03323807.1| hypothetical protein BIFCAT_00579 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661046|gb|EEB21621.1| hypothetical protein BIFCAT_00579 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 431
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ I + ++ ++G
Sbjct: 132 GLAAVTEHYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETIMRAELRRQGKI 191
Query: 223 CSSISELD 230
+ E D
Sbjct: 192 EWAEEEFD 199
>gi|160887119|ref|ZP_02068122.1| hypothetical protein BACOVA_05135 [Bacteroides ovatus ATCC 8483]
gi|293370879|ref|ZP_06617424.1| 3'-5' exonuclease [Bacteroides ovatus SD CMC 3f]
gi|299148614|ref|ZP_07041676.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_23]
gi|336414892|ref|ZP_08595235.1| hypothetical protein HMPREF1017_02343 [Bacteroides ovatus
3_8_47FAA]
gi|423288786|ref|ZP_17267637.1| hypothetical protein HMPREF1069_02680 [Bacteroides ovatus
CL02T12C04]
gi|423295051|ref|ZP_17273178.1| hypothetical protein HMPREF1070_01843 [Bacteroides ovatus
CL03T12C18]
gi|156107530|gb|EDO09275.1| 3'-5' exonuclease [Bacteroides ovatus ATCC 8483]
gi|292634095|gb|EFF52639.1| 3'-5' exonuclease [Bacteroides ovatus SD CMC 3f]
gi|298513375|gb|EFI37262.1| 3'-5' exonuclease domain protein [Bacteroides sp. 3_1_23]
gi|335941753|gb|EGN03604.1| hypothetical protein HMPREF1017_02343 [Bacteroides ovatus
3_8_47FAA]
gi|392669984|gb|EIY63470.1| hypothetical protein HMPREF1069_02680 [Bacteroides ovatus
CL02T12C04]
gi|392674074|gb|EIY67524.1| hypothetical protein HMPREF1070_01843 [Bacteroides ovatus
CL03T12C18]
Length = 219
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSS-LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +I+++ S T A A QS ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGRIYVIQSEAE---TEKAVAYLQSRPVIGIDSETRPSFTKGQSH-KVALLQISSE---- 72
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
+F L+++ + P L +L +P ++K+G K D + L + F
Sbjct: 73 --------ECCFLFRLNMTGLTQP-----LVDLLENPAVIKVGLSLKDDFMMLHKRAPFT 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
Q C + + R+ + KSL I L +SK + S+
Sbjct: 120 QQSC-------------------IELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
W L++ QK YAA DA + I+N+ Q ++ Q G+
Sbjct: 161 WEADVLSDGQKQYAATDAWACLNIYNLLQ-ELKQTGD 196
>gi|426195548|gb|EKV45477.1| hypothetical protein AGABI2DRAFT_186278 [Agaricus bisporus var.
bisporus H97]
Length = 870
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D+ I L E+L E+F P I+K+ + D+++L F L
Sbjct: 312 FVVDV--IALRDEMEVLNEVFTDPKIVKVFHGAESDIVWLQQDFN--------------L 355
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ ++++ H +L + P+ LAN+ + D K Q +DW RPL +E YA
Sbjct: 356 YVVNLFDTYHASKL-LEFPRH--GLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYAR 412
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEK 244
D H L+ I++ + + +G S + L + +L +
Sbjct: 413 SDTHFLLFIYDNLRNALLDRGGPASRSPHASKNPLHASINHVLTR 457
>gi|310792006|gb|EFQ27533.1| 3'-5' exonuclease [Glomerella graminicola M1.001]
Length = 882
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+++L D+G V D LH+ Q
Sbjct: 284 QVLNEVFADPSIIKVFHGAFMDMVWLQR-------DLGL-YVNGLFDTGMACEVLHYPQ- 334
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
KSLA + K+ ++ K+ Q +DW RPL+EE YA D H L+ I++ +
Sbjct: 335 --------KSLAFLLKKFVNFDADKKYQLADWRVRPLSEEMLYYARSDTHYLLYIYDKMR 386
Query: 214 VKVAQKGN 221
++ K +
Sbjct: 387 NELVMKSD 394
>gi|356515280|ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
Length = 873
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ L LS+ +D E Q S +S +L+Q++ + E D +
Sbjct: 127 QLKELVDVLSEERFFAVDTE---QHSLRSFLGFTALVQISTR-------EKD-------Y 169
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L +L+ +F +P I K+ D+++L F ++
Sbjct: 170 LVD--TIALHDFMGILRPIFANPSICKVFHGADNDIVWLQRDF--------------HIY 213
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ + L K KSLA + + ++ +K LQ DW RPL+ E +YA
Sbjct: 214 VVNLFDT---SKACEVLSKPQKSLAYLLETYCGVTTNKLLQREDWRQRPLSAEMVHYART 270
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSS 225
DAH L+ I N ++ Q N SS
Sbjct: 271 DAHYLLYIANCLINELKQLDNENSS 295
>gi|384100730|ref|ZP_10001787.1| ribonuclease D [Rhodococcus imtechensis RKJ300]
gi|383841636|gb|EID80913.1| ribonuclease D [Rhodococcus imtechensis RKJ300]
Length = 429
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELDEQGKSEWAAQEFEHIRL 216
>gi|333029171|ref|ZP_08457232.1| 3'-5' exonuclease [Bacteroides coprosuis DSM 18011]
gi|332739768|gb|EGJ70250.1| 3'-5' exonuclease [Bacteroides coprosuis DSM 18011]
Length = 211
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 42/196 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L+ +++G+D+E +P ++ +V+LLQ+ S ++ FL L+ +
Sbjct: 40 LNAQTILGIDSETRPAFVKGKSY-KVALLQI--------------STDNICFLFRLNKLG 84
Query: 89 L-PSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGCDIGFDRVEPYLDITSIY 145
L P + ELL+ +P+I K+G + D + L ++F + C +D+
Sbjct: 85 LVPELIELLE----NPNIKKIGLSLRDDFMMLRKRASFKQENC----------IDLQEYV 130
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
H K KSL I L +SK + S+W LT+ Q+ YAA DA
Sbjct: 131 KHFGIKD---------KSLQKIYAILFKEKISKAQRLSNWEAVELTDAQQRYAATDAWSC 181
Query: 206 IEIFNIFQVKVAQKGN 221
+ I+N + ++ Q G+
Sbjct: 182 LRIYNFLE-ELKQSGD 196
>gi|419967866|ref|ZP_14483740.1| ribonuclease D [Rhodococcus opacus M213]
gi|414566760|gb|EKT77579.1| ribonuclease D [Rhodococcus opacus M213]
Length = 429
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELDEQGKSEWAAQEFEHIRL 216
>gi|354566787|ref|ZP_08985958.1| 3'-5' exonuclease [Fischerella sp. JSC-11]
gi|353544446|gb|EHC13900.1| 3'-5' exonuclease [Fischerella sp. JSC-11]
Length = 313
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+Q S++ +D E ++S PR+SL+Q+ P + + +++LD+ +P
Sbjct: 24 FTQRSILWIDTEVA---DYKSKNPRLSLIQVLDDPT--------DMSGDRIYILDVLDLP 72
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNH 147
+ + + ++ ++P I K+ D+ +L + C + + PY I + N+
Sbjct: 73 -DIVADFIAQIMINPAIEKVFHNASYDVKFLGNKKAKNVTCTLDMAKKIPYY-ILPLPNY 130
Query: 148 LHHKQLGRKLPKETKSLAN-ICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ K+LAN +CK L + K+ Q SDW RPLTEEQ YA +D L
Sbjct: 131 ------------KLKTLANKLCKFL---HVDKQEQTSDWGQRPLTEEQIEYAYLDCIYLA 175
Query: 207 EIFNIFQVKVAQKGNSCSSISEL 229
++ + +++ QK N I +L
Sbjct: 176 QVHSRL-IELNQKNNPDPEIEDL 197
>gi|72162300|ref|YP_289957.1| HRDC:3'-5' exonuclease [Thermobifida fusca YX]
gi|71916032|gb|AAZ55934.1| HRDC:3'-5' exonuclease [Thermobifida fusca YX]
Length = 420
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 147 HLHHKQL------GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
HL ++L GR L + L + + +L + L+KE DWS RPL E+ YAA+
Sbjct: 124 HLRPRRLFDTELAGRLLGYQRVGLGAMVERVLGVRLAKEHAAVDWSTRPLPEDWLRYAAL 183
Query: 201 DAHCLIEIFNIFQVKVAQKGN 221
D LIE+ + + ++A+ G
Sbjct: 184 DVEVLIELRDALEAELAETGK 204
>gi|297826687|ref|XP_002881226.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
gi|297327065|gb|EFH57485.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 43/231 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ LA L++ + +D E Q S +S +L+Q++ E D F
Sbjct: 126 QLKELAEILAKEKVFAVDTE---QHSLRSFLGFTALIQISTH-------EKD-------F 168
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D +I L +L+ +F P+I K+ D+++L F ++
Sbjct: 169 LVD--TIVLHDAMSILRPVFSEPNICKVFHGADNDVLWLQRDF--------------HIY 212
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ ++++ ++ L K +SLA + + + ++ +K LQ DW RPL+EE YA
Sbjct: 213 VVNMFDTAKACEV---LSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYART 269
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKT 251
DAH L+ I + ++ Q ++ DSS+ D +LE N T
Sbjct: 270 DAHYLLYIADSLTAELKQ-------LATEDSSSPDDRFHFLLEASRRSNMT 313
>gi|414871321|tpg|DAA49878.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 532
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E F P K+ +D+I+L F C++ FD
Sbjct: 324 LGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNL-FDT----------------G 366
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 367 QASKVLQMDRNSLEHLLHHFCGVAANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDL 426
Query: 212 FQVKVAQKGNSCSS 225
++++ G+SC +
Sbjct: 427 MRLRLVN-GSSCEN 439
>gi|301091688|ref|XP_002896023.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095658|gb|EEY53710.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 575
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 67/227 (29%)
Query: 35 VGLDAEWKPQR---SHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+G D+EWK S + + +LLQLA + VV L++ +I LP
Sbjct: 347 IGFDSEWKAVHEVASSEGTAAKCALLQLASREKAFV--------VDVVALIEHGNILLP- 397
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
LF S ++KLGF + D+ L S G + + +D+ ++ L
Sbjct: 398 -------LFQSESVIKLGFDTRGDVKALRSFLT--GNYTAENVMSMLVDLQAVTRKLP-T 447
Query: 152 QLGRKLP------------------------------KETKS---------------LAN 166
Q G K+ K T+S LA
Sbjct: 448 QKGTKVEVKGGDGSSSNANTLVANSEATGTETRSRKWKHTRSKASENDASANSSRLGLAA 507
Query: 167 ICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
I L + L K + S+W RPLT+ Q +YAA+DAH L++I+ Q
Sbjct: 508 IAATYLGLPLDKRARMSNWERRPLTQAQLHYAALDAHVLVQIYYKMQ 554
>gi|302916517|ref|XP_003052069.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
gi|256733008|gb|EEU46356.1| hypothetical protein NECHADRAFT_92603 [Nectria haematococca mpVI
77-13-4]
Length = 833
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F +P I+K+ D+++L D+G V D + LH+
Sbjct: 286 EVLNEVFTNPKIIKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFACDQLHYP-- 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
KSLA + + +D K+ Q +DW RP+ EE YA D H L+ I++
Sbjct: 336 -------AKSLAFLLSKFVDFDADKQYQLADWRIRPIPEEMMYYARSDTHYLLYIYD 385
>gi|308501811|ref|XP_003113090.1| hypothetical protein CRE_25297 [Caenorhabditis remanei]
gi|308265391|gb|EFP09344.1| hypothetical protein CRE_25297 [Caenorhabditis remanei]
Length = 793
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD---L 84
+ + + +G D+E+KP S+ R++ +QL FN + VFL+D L
Sbjct: 443 TVEEGTYIGYDSEFKPGHLTDSSISRMATIQLF------FNEK--------VFLVDCVIL 488
Query: 85 SSIPLPS-IWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL--- 139
I + +W+ + LF S + +GF K D+ L + + D + V+ ++
Sbjct: 489 EKIDISEGMWKKFFESLFHSKKLTVIGFDMKNDMEALFTVRPIRD-DFRQEDVKNFICVK 547
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I N L L K++ L + +ELL++++ K Q +W RPL + Q YA+
Sbjct: 548 RFVEILNEYDASILS--LTKKSCRLITLVEELLNLTMDKTEQTGNWQCRPLRKNQIVYAS 605
Query: 200 IDAHCLIEIF-NIFQV 214
+DA ++++F IF++
Sbjct: 606 LDAVIVLDLFRKIFEI 621
>gi|111023812|ref|YP_706784.1| ribonuclease III [Rhodococcus jostii RHA1]
gi|397737347|ref|ZP_10504019.1| 3'-5' exonuclease family protein [Rhodococcus sp. JVH1]
gi|110823342|gb|ABG98626.1| probable ribonuclease III [Rhodococcus jostii RHA1]
gi|396926786|gb|EJI94023.1| 3'-5' exonuclease family protein [Rhodococcus sp. JVH1]
Length = 429
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ N+
Sbjct: 136 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYAALDVEVLVELRNVMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELDEQGKSEWAAQEFEHIRL 216
>gi|357471299|ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
gi|355506989|gb|AES88131.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
Length = 974
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 43/207 (20%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L LS+ G+D E Q S +S L+Q++ Q + D +L+D
Sbjct: 165 LVNVLSKEKFFGVDTE---QHSLRSFLGFTGLVQISTQ-------QED-------YLID- 206
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L E+L+ +F P I K+ D+++L F ++ + ++
Sbjct: 207 -TIALHDSMEILRPVFADPSICKVFHGADNDVLWLQRDF--------------HIYVVNL 251
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQC-----SDWSNRPLTEEQKNYAA 199
++ + L K KSLA + + ++ +K LQ DW RPL+ E +YA
Sbjct: 252 FDT---SKACEVLSKPQKSLAYLLETYCGVNTNKLLQVWPNYREDWRQRPLSAEMVHYAR 308
Query: 200 IDAHCLIEIFN--IFQVKVAQKGNSCS 224
DAH L+ I N I ++K NSCS
Sbjct: 309 TDAHYLLYIANCLIDELKQLDNENSCS 335
>gi|255569470|ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative [Ricinus communis]
Length = 857
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 294 LREVFKDPTKRKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------GQASR 336
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ + I+ +KE Q +DW RPLT+E Y D H L+ I+++ ++
Sbjct: 337 VLKLERNSLEHLLRHFCGITANKEYQNADWRLRPLTDEMLRYGREDTHYLLYIYDLMRIM 396
Query: 216 V----AQKGNSCSSISELDSSNLDLGLK 239
+ + NS S ++E+ + D+ ++
Sbjct: 397 LLSMPNETENSNSPLAEVYKRSYDVCMQ 424
>gi|389584428|dbj|GAB67160.1| 3'-5' exonuclease domain containing protein [Plasmodium cynomolgi
strain B]
Length = 734
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
KSL+++C++ L +L+K+LQ S+WS RPL E Q +YAA DA+ LI
Sbjct: 652 KSLSHLCQKFLGKNLNKKLQLSNWSRRPLMESQIHYAATDAYVLI 696
>gi|423348957|ref|ZP_17326613.1| hypothetical protein HMPREF9156_00151 [Scardovia wiggsiae F0424]
gi|393703186|gb|EJD65387.1| hypothetical protein HMPREF9156_00151 [Scardovia wiggsiae F0424]
Length = 432
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
Y ++ R L + LA + + L ++L+KE +DWS RPL + +NYAA+D
Sbjct: 117 YRLFDTERAARLLGQAHFGLAAVTERYLGVTLAKEHSAADWSYRPLGRDMRNYAALDVEV 176
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLK 239
LIE+ + + + G S + E LD G++
Sbjct: 177 LIELKKLMAADLRKAGKSEWAREEF-GYLLDKGMQ 210
>gi|184201057|ref|YP_001855264.1| putative ribonuclease D [Kocuria rhizophila DC2201]
gi|183581287|dbj|BAG29758.1| putative ribonuclease D [Kocuria rhizophila DC2201]
Length = 420
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L LA++ +ELL +LSKE DWS RPL + NYAA+D L+++ +
Sbjct: 127 GRLLGLRKVGLASMTEELLGFTLSKEHSAVDWSQRPLPVDWLNYAALDVEVLVQLRWATE 186
Query: 214 VKVAQKGNSCSSISELD 230
++A+ G ++ E +
Sbjct: 187 ERLARAGKLDWALEEFE 203
>gi|160889123|ref|ZP_02070126.1| hypothetical protein BACUNI_01544 [Bacteroides uniformis ATCC 8492]
gi|270296116|ref|ZP_06202316.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|156861130|gb|EDO54561.1| 3'-5' exonuclease [Bacteroides uniformis ATCC 8492]
gi|270273520|gb|EFA19382.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 207
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVAYLKSCPLLGIDSETRPSFT-KGQIHKVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLENPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C + ++ R + KSL I L +SK + S+W
Sbjct: 121 HAC-------------------IELQEYVRAFGIQDKSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAETLTEPQKLYAATDAWACLNIYNKLQ 189
>gi|426256366|ref|XP_004021811.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Ovis aries]
Length = 1446
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + RV+L+QL + S +L +
Sbjct: 67 ISMSLSDGDVVGFDIEWPPVYK-KGTLGRVALIQLCV-------------SESKCYLFHI 112
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
SS+ + + LK L + I K G +QD L F D+ +++ +++T +
Sbjct: 113 SSMLV--FPQGLKMLLENEAIKKAGVGIEQDQWKLLRDF-----DV---KLKSIVELTDV 162
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL ET SL + K L L K+ ++CS+WS PLTE+QK YAA D
Sbjct: 163 ANE--------KLKCIETWSLNGLVKYLFGKQLLKDRSVRCSNWSKFPLTEDQKVYAATD 214
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 215 AYAGFIIY 222
>gi|320159696|ref|YP_004172920.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
gi|319993549|dbj|BAJ62320.1| putative ribonuclease D [Anaerolinea thermophila UNI-1]
Length = 380
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG- 154
L E+F +P I K+ + D++ L D GF + HL +
Sbjct: 72 LNEIFSNPGIEKVFHAAEYDILCLKR-------DFGF-----------TFTHLFDTMIAA 113
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L + LA + +E ++L K Q ++W+ RPL NYA +D H LI++ N
Sbjct: 114 RILGRSEVGLAALLEEHFGVTLDKRYQRANWARRPLPPAMLNYARLDTHYLIDLRNHLAK 173
Query: 215 KVAQKGNSCSSISELD 230
++A++G ++++E D
Sbjct: 174 ELAERG--LTALAEED 187
>gi|317480691|ref|ZP_07939778.1| 3'-5' exonuclease [Bacteroides sp. 4_1_36]
gi|316903198|gb|EFV25065.1| 3'-5' exonuclease [Bacteroides sp. 4_1_36]
Length = 207
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVAYLKSCPLLGIDSETRPSFT-KGQIHKVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLENPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C + ++ R + KSL I L +SK + S+W
Sbjct: 121 HAC-------------------IELQEYVRAFGIQDKSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAETLTEPQKLYAATDAWACLNIYNRLQ 189
>gi|41408900|ref|NP_961736.1| hypothetical protein MAP2802 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41397259|gb|AAS05119.1| hypothetical protein MAP_2802 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 428
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 135 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 194
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 195 DVLAEQGKTDWAAQEFD 211
>gi|150951537|ref|XP_001387875.2| exosome component 3'-5' exonuclease [Scheffersomyces stipitis CBS
6054]
gi|149388676|gb|EAZ63852.2| ribosomal RNA processing 3'-5' exonuclease [Scheffersomyces
stipitis CBS 6054]
Length = 792
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E + L +SS + +D E RS+ + V L+Q+ SN +
Sbjct: 241 ELQKMVEELKKSSEIAVDLEHHDYRSY---YGIVCLMQI--------------SNRDQDW 283
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
++D ++ L E L +F +P I+K+ D+I+L D+G L
Sbjct: 284 IID--TLALRDDLECLNTVFTNPHIVKVFHGAFMDIIWLQR-------DLG-------LY 327
Query: 141 ITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I S+++ H K LG PK SLA + + SK+ Q +DW RPL+ YA
Sbjct: 328 IVSLFDTYHASKSLG--FPK--FSLAYLLETFAHFKTSKKYQLADWRIRPLSPPMMAYAR 383
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ IF+ + K+ GN
Sbjct: 384 SDTHFLLSIFDQLKNKLIDAGN 405
>gi|423303634|ref|ZP_17281633.1| hypothetical protein HMPREF1072_00573 [Bacteroides uniformis
CL03T00C23]
gi|423307643|ref|ZP_17285633.1| hypothetical protein HMPREF1073_00383 [Bacteroides uniformis
CL03T12C37]
gi|392687998|gb|EIY81289.1| hypothetical protein HMPREF1072_00573 [Bacteroides uniformis
CL03T00C23]
gi|392689512|gb|EIY82789.1| hypothetical protein HMPREF1073_00383 [Bacteroides uniformis
CL03T12C37]
Length = 207
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVAYLKSCPLLGIDSETRPSFT-KGQIHKVALLQISSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPVI-----TLLENPSVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
C + ++ R + KSL I L +SK + S+W
Sbjct: 121 HAC-------------------IELQEYVRAFGIQDKSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LTE QK YAA DA + I+N Q
Sbjct: 162 EAETLTEPQKLYAATDAWACLNIYNKLQ 189
>gi|417749597|ref|ZP_12397989.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S397]
gi|336458819|gb|EGO37776.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S397]
Length = 428
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 135 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 194
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 195 DVLAEQGKTDWAAQEFD 211
>gi|440778250|ref|ZP_20957016.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S5]
gi|436721353|gb|ELP45488.1| ribonuclease D [Mycobacterium avium subsp. paratuberculosis S5]
Length = 416
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 123 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 182
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 183 DVLAEQGKTDWAAQEFD 199
>gi|383823537|ref|ZP_09978727.1| 3'-5' exonuclease [Mycobacterium xenopi RIVM700367]
gi|383338816|gb|EID17175.1| 3'-5' exonuclease [Mycobacterium xenopi RIVM700367]
Length = 417
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL +SL+K +DWS RPL NYAA+D LIE+
Sbjct: 134 GRLAGFERVNLAAMVQRLLGLSLAKGHGAADWSKRPLPAAWLNYAALDVEVLIELREAIA 193
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E +
Sbjct: 194 AVLAEQGKTHWAAEEFE 210
>gi|118463563|ref|YP_882753.1| ribonuclease D [Mycobacterium avium 104]
gi|118164850|gb|ABK65747.1| ribonuclease D [Mycobacterium avium 104]
Length = 428
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 135 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 194
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E D
Sbjct: 195 DVLAEQGKTDWAAQEFD 211
>gi|238063529|ref|ZP_04608238.1| 3'-5' exonuclease [Micromonospora sp. ATCC 39149]
gi|237885340|gb|EEP74168.1| 3'-5' exonuclease [Micromonospora sp. ATCC 39149]
Length = 442
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL SL K +DWS+RPL E YAA+D L ++ + ++A++
Sbjct: 162 ERVGLAALTEQLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLTDLRDALDAELARQ 221
Query: 220 GNSCSSISEL 229
G S + E
Sbjct: 222 GKSAWAAEEF 231
>gi|414871320|tpg|DAA49877.1| TPA: hypothetical protein ZEAMMB73_153639 [Zea mays]
Length = 901
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E F P K+ +D+I+L F C++ FD
Sbjct: 324 LGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNL-FDT----------------G 366
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 367 QASKVLQMDRNSLEHLLHHFCGVAANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDL 426
Query: 212 FQVKVAQKGNSCSS 225
++++ G+SC +
Sbjct: 427 MRLRLVN-GSSCEN 439
>gi|337755515|ref|YP_004648026.1| ribonuclease D [Francisella sp. TX077308]
gi|336447120|gb|AEI36426.1| Ribonuclease D [Francisella sp. TX077308]
Length = 364
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 42/187 (22%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD- 83
+ +AL + + +D E+ R++ +P + L+Q+A + +FL+D
Sbjct: 12 VVKALKNAKEIAVDTEFYWMRTY---YPELCLVQIATENE--------------IFLIDT 54
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
L + LK++F +I K+ D+ + F C++
Sbjct: 55 LEDLDFSK----LKDIFEDTNIQKIIHSATNDIPIIKRFF---DCEV------------- 94
Query: 144 IYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
N++ QL + SL + K++LDI + KE Q SDW RPL+++Q +YA D
Sbjct: 95 --NNIFDTQLAASFLGTQSQISLKALLKDILDIEMEKESQFSDWRKRPLSQKQFDYALKD 152
Query: 202 AHCLIEI 208
LIEI
Sbjct: 153 VEHLIEI 159
>gi|298252714|ref|ZP_06976508.1| ribonuclease D [Gardnerella vaginalis 5-1]
gi|297533078|gb|EFH71962.1| ribonuclease D [Gardnerella vaginalis 5-1]
Length = 476
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ +V++ ++G
Sbjct: 180 VMRVELKKQG 189
>gi|372271279|ref|ZP_09507327.1| ribonuclease D [Marinobacterium stanieri S30]
Length = 393
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ L + LD+ L KE SDW RPLT EQ+ YAA+D L + + + ++ QKG
Sbjct: 132 SMGLRRLVAHALDVELDKEETTSDWLQRPLTPEQERYAALDVAYLPTLALMQRHELEQKG 191
Query: 221 ------NSCS----SISELDSSNLDLGLKGILEK---PDIGNKTV------RFKLCEALD 261
+C+ +++ELD ++ + + + D+ + R + C D
Sbjct: 192 RLSWAEEACAEVGQNVAELDEADPETYFQRFSQAWHFDDVRRAALRDLSAWRERTCRKRD 251
Query: 262 IIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKIL 305
+ R +Q L E +N + +++R+YGE+IL
Sbjct: 252 LSRNRLLRNQVLLEVAERLPQTINQLDKIVQRGRVIREYGEEIL 295
>gi|341877730|gb|EGT33665.1| hypothetical protein CAEBREN_26343 [Caenorhabditis brenneri]
Length = 790
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 37/196 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL--- 84
+ + +G D+E+KP + R++++QL FN + FL+D
Sbjct: 442 TVEEGVFIGYDSEFKPFHLVDTLKSRMAIMQLF------FNKRA--------FLIDWVEL 487
Query: 85 --SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDIT 142
+S+ + + + LF+S + +GF K D+ + F + D +P DI
Sbjct: 488 ENNSVDDKLVKKFFESLFMSKKLKVIGFDIKNDM---EALFTVRAIK---DDYKPE-DIK 540
Query: 143 S---------IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
+ I N L+ K L + K T +A + + L+ + K QC +W RPL +
Sbjct: 541 NAICVKRFADILNDLNPKILN--MEKRTSKMAVLVENLIGWKMDKSEQCGNWQARPLRKN 598
Query: 194 QKNYAAIDAHCLIEIF 209
Q YAA+DA ++E+F
Sbjct: 599 QIVYAALDAVAVVELF 614
>gi|346326755|gb|EGX96351.1| exosome complex exonuclease Rrp [Cordyceps militaris CM01]
Length = 852
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN-HLHHKQ 152
E+L E+F P I+K+ D+I+L D+G L + +++ + +Q
Sbjct: 285 EVLNEVFADPSIVKVFHGAYMDMIWLQR-------DLG-------LYVNGLFDTYFACQQ 330
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG +SLA + + D K+ Q +DW RP+ EE YA D H L+ I++
Sbjct: 331 LGYS----GRSLAFLLSKFADFDADKQYQLADWRIRPIPEEMLYYARSDTHYLLHIYD-- 384
Query: 213 QVKVAQKGNSCSSISELD 230
QV+ +S S+ E D
Sbjct: 385 QVRNDLVSSSNRSVPEQD 402
>gi|319901369|ref|YP_004161097.1| 3'-5' exonuclease [Bacteroides helcogenes P 36-108]
gi|319416400|gb|ADV43511.1| 3'-5' exonuclease [Bacteroides helcogenes P 36-108]
Length = 220
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 43/209 (20%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPR 66
P +IH+V ++P A A +S +L+G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVV---QTPWEAEKAVAYLKSCTLLGIDSETRPSFT-KGQSHKVALLQVSSE---- 72
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFC 124
+F L+L+ + LP I L +P++ K+G + D + L + F
Sbjct: 73 --------EHCFLFRLNLTGLTLPVI-----TLLENPNVTKVGLSLRDDFMMLHKRAPFE 119
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
C + ++ R + KSL I L +SK + S+
Sbjct: 120 QHAC-------------------IELQEYVRAFGIQDKSLQKIYGILFGEKISKSQRLSN 160
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
W L+E QK YAA DA + I+N Q
Sbjct: 161 WEADMLSESQKQYAATDAWACLNIYNRLQ 189
>gi|118348280|ref|XP_001007615.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89289382|gb|EAR87370.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 964
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
K++ + +S E L + ++S+ G+D E+ + + N V +Q+
Sbjct: 750 KLYFINQIDSDESRILKEEIEKNSIFGIDLEYYSENKDK-NLGFVCTIQI---------- 798
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
S ++ F++D ++ I +LL K LF++ +K+ + D+ +L + F
Sbjct: 799 ----STVNMDFMIDAMALR-NQINQLLNKSLFLNKTKIKILHGCENDIKWLKNDF----- 848
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
DI DI ++++ + + + + +++ SL N+ ++ L + L K Q SDW R
Sbjct: 849 DI---------DIVNLFDTMFAEMIIKN-KQQSYSLKNLSQDYLGVELDKSYQISDWRIR 898
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
PL NYA +D+ L+ +F I + + K
Sbjct: 899 PLPTPMMNYARVDSFILLRLFPIMKQMLTSKN 930
>gi|326502996|dbj|BAJ99123.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I LKE+F P K+ +D+++L F C++ FD
Sbjct: 94 IGSYLKEIFKDPTKRKVMHGADRDIMWLQRDFRVYVCNL-FDT----------------G 136
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L E SL ++ ++ +K Q +DW +RPL++E YA D H L+ I+++
Sbjct: 137 QASRVLQMERNSLEHLLHHFCGVTANKIYQNADWRSRPLSDEMIKYAREDTHYLLYIYDL 196
Query: 212 FQVKVAQKGNS 222
++++ ++ S
Sbjct: 197 MRLRLQRESTS 207
>gi|326496869|dbj|BAJ98461.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I LKE+F P K+ +D+++L F C++ FD
Sbjct: 26 IGSYLKEIFKDPTKRKVMHGADRDIMWLQRDFRVYVCNL-FDT----------------G 68
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L E SL ++ ++ +K Q +DW +RPL++E YA D H L+ I+++
Sbjct: 69 QASRVLQMERNSLEHLLHHFCGVTANKIYQNADWRSRPLSDEMIKYAREDTHYLLYIYDL 128
Query: 212 FQVKVAQKGNS 222
++++ ++ S
Sbjct: 129 MRLRLQRESTS 139
>gi|283783345|ref|YP_003374099.1| 3'-5' exonuclease [Gardnerella vaginalis 409-05]
gi|283441638|gb|ADB14104.1| 3'-5' exonuclease [Gardnerella vaginalis 409-05]
Length = 476
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ +V++ ++G
Sbjct: 180 VMRVELKKQG 189
>gi|111226700|ref|XP_642107.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970724|gb|EAL68469.2| 3'-5' exonuclease domain-containing protein [Dictyostelium
discoideum AX4]
Length = 686
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 56/197 (28%)
Query: 34 LVGLDAEW-------------KPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
++G DAEW K ++H ++ +V+L+QL S+ + F
Sbjct: 163 IIGFDAEWGNPNSIFDDKIDDKTTKTHYNH--KVALIQL--------------SSKNETF 206
Query: 81 LLDLSS---IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
L+ +S IP+ L+++ P ++K+G QD + TF +
Sbjct: 207 LIQVSQMEKIPIS-----LEQILTDPRLIKVGVAVSQDAATIFQTFSV--------VTKG 253
Query: 138 YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQK 195
Y+D+ I R E LA++ +++++L+K +++C W N+ L+ +Q
Sbjct: 254 YVDLVPI---------ARLTNYEGNGLASLALNVMNVTLNKSNKIRCGHWENKKLSNDQI 304
Query: 196 NYAAIDAHCLIEIFNIF 212
+YAA DA EIF I
Sbjct: 305 HYAAADAWVGREIFEIM 321
>gi|338722160|ref|XP_003364495.1| PREDICTED: exosome component 10 isoform 2 [Equus caballus]
Length = 861
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESFTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKRYCSVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|296129572|ref|YP_003636822.1| 3'-5' exonuclease [Cellulomonas flavigena DSM 20109]
gi|296021387|gb|ADG74623.1| 3'-5' exonuclease [Cellulomonas flavigena DSM 20109]
Length = 417
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L E LA + + L + L+KE DWS RPL E YAA+D L+E+ +
Sbjct: 136 RLLGMERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPTEWLRYAALDVEVLVEVRQVLAE 195
Query: 215 KVAQKGNSCSSISELDS 231
++A G + + E ++
Sbjct: 196 RLAVSGKAEWARQEFEA 212
>gi|224023974|ref|ZP_03642340.1| hypothetical protein BACCOPRO_00691 [Bacteroides coprophilus DSM
18228]
gi|224017196|gb|EEF75208.1| hypothetical protein BACCOPRO_00691 [Bacteroides coprophilus DSM
18228]
Length = 204
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 38/187 (20%)
Query: 29 LSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
L+ +LVG+D E +P R N +V+LLQ+A A FL L+ I
Sbjct: 41 LNSHALVGVDTETRPSFRKGMVN--QVALLQVAT--------------ADACFLFRLNHI 84
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL-DITSIYN 146
LP + L+E F+ D+LK+G K D LS +R +P + + +
Sbjct: 85 GLP---DFLEE-FLQNDVLKVGLSLKDDFRMLSRR----------NRQDPRTGNWVELQD 130
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
++ H + E SL I L +SK + S+W LTE Q+ YAA DA +
Sbjct: 131 YVPHFGI------EEMSLQKIYALLFGEKISKTQRLSNWEAETLTEAQQLYAATDAWACV 184
Query: 207 EIFNIFQ 213
I+ +
Sbjct: 185 RIYEYLE 191
>gi|302415657|ref|XP_003005660.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
gi|261355076|gb|EEY17504.1| 3'-5' exonuclease domain-containing protein [Verticillium
albo-atrum VaMs.102]
Length = 894
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F +P I+K+ D+ +L D+G L I +++ ++
Sbjct: 331 EVLNEVFTNPKIVKVFHGAHMDMQWLQR-------DLG-------LYINGLFDTFFAAEI 376
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
L +SLA + K +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 377 ---LGYPQRSLAYLLKRFVDFDADKKYQMADWRIRPLPEEMFYYARSDTHYLLYIFD 430
>gi|340966615|gb|EGS22122.1| exosome complex exonuclease rrp6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 859
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E+L E+F P I+K+ D+I+L D+G L I +++
Sbjct: 285 VPWRHKLEILNEVFADPKIVKVLHGAFMDIIWLQR-------DLG-------LYIVGLFD 330
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ + L KSLA + K D K+ Q +DW RPL EE YA D H L+
Sbjct: 331 TYYASDV---LGYPGKSLAYLLKRFADFDADKKYQLADWRIRPLPEEMFYYARSDTHFLL 387
Query: 207 EIFNIFQVKVAQ 218
I++ + ++A+
Sbjct: 388 YIYDHLRNELAE 399
>gi|118379202|ref|XP_001022768.1| 3'-5' exonuclease family protein [Tetrahymena thermophila]
gi|89304535|gb|EAS02523.1| 3'-5' exonuclease family protein [Tetrahymena thermophila SB210]
Length = 645
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
T L C L+ K+LQ S+WS+RPL+EEQ NYAA+D+H LI+I
Sbjct: 88 TYLLQKYCDYTLEKKEKKQLQLSEWSDRPLSEEQLNYAALDSHFLIKI 135
>gi|406573982|ref|ZP_11049722.1| putative ribonuclease D [Janibacter hoylei PVAS-1]
gi|404556583|gb|EKA62045.1| putative ribonuclease D [Janibacter hoylei PVAS-1]
Length = 555
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ISL+KE DWS RPL E YAA+D L E+ N+ + +A + S
Sbjct: 144 GLAAVIEHYLGISLAKEHSAVDWSTRPLPEPWLRYAALDVEVLTEVRNLMGIDLAAQDKS 203
Query: 223 CSSISELDS 231
+ E ++
Sbjct: 204 EWARQEFEA 212
>gi|149695529|ref|XP_001492550.1| PREDICTED: exosome component 10 isoform 1 [Equus caballus]
Length = 886
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESFTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKRYCSVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|443695610|gb|ELT96477.1| hypothetical protein CAPTEDRAFT_99256, partial [Capitella teleta]
Length = 627
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 40/211 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L LSQ + +D E S++S LLQ++ + FL+D
Sbjct: 244 LCAMLSQVKEIAVDVE---HHSYRSFLGLTCLLQISTRTHD--------------FLVD- 285
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
++ L LL +F P I+K+ +QD+ +L D+G + + ++
Sbjct: 286 -ALALREHLHLLNNVFTDPGIVKVFHGAEQDIHWLQR-------DLG-------VYVVNM 330
Query: 145 YNHLHH-KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
++ H K LG LP+ SLA++ + K+ Q +DW RPL E+ +YA D H
Sbjct: 331 FDTFHAAKALG--LPR--LSLAHLLTTYCSVKPDKKFQMADWRIRPLPEQLVHYAREDTH 386
Query: 204 CLIEIFNIFQVKVAQKGNSCSSI--SELDSS 232
L+ + ++ + ++ GN +++ S LDSS
Sbjct: 387 YLLYVHDLLKNQLLDAGNEAANLLCSVLDSS 417
>gi|300723126|ref|YP_003712424.1| ribonuclease D [Xenorhabdus nematophila ATCC 19061]
gi|297629641|emb|CBJ90244.1| RNase D, processes tRNA precursor [Xenorhabdus nematophila ATCC
19061]
Length = 379
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 44/230 (19%)
Query: 1 MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
++C Y+ LVT+ + + + + + LD E+ R++ +P++ L+QL
Sbjct: 2 LNCNYQ------LVTT--DAQLQSVCEQAKKHARIALDTEFVRTRTY---YPQLGLIQL- 49
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
D S++ L++S W+ LK L V PD+LKL +DL
Sbjct: 50 ----------FDGEQLSLIDPLEISQ------WQPLKALLVDPDVLKLIHAGSEDLEVFG 93
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
++F P +D + + H + A + E L + L K
Sbjct: 94 NSFQCLPT--------PMIDTQVLAAFIGHPI--------SCGFATLVAEYLHVELDKSE 137
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
+DW RPL+ +Q YAA D + L+ + +I K Q G ++ E D
Sbjct: 138 SRTDWLARPLSRKQCEYAAADVYYLLPLADILLKKTEQAGYFDAAKDESD 187
>gi|254877166|ref|ZP_05249876.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254843187|gb|EET21601.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 364
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+Q+A +
Sbjct: 6 NKQLNNVIEILKSTSQIAVDTEFYWMRTY---YPELCLVQIATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LK++F +I K+ D+ + F C++
Sbjct: 49 IFLIDTLEDLDFSK----LKDIFEDTNIQKIIHSATNDIPIIKRFF---DCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + K++LDI + KE Q SDW RPL+++Q
Sbjct: 95 --------NNIFDTQLAASFLGTQSQISLKALLKDILDIEMEKESQFSDWRKRPLSQKQF 146
Query: 196 NYAAIDAHCLIEI 208
+YA D LIEI
Sbjct: 147 DYALKDVEHLIEI 159
>gi|345306474|ref|XP_001508312.2| PREDICTED: Werner syndrome ATP-dependent helicase-like
[Ornithorhynchus anatinus]
Length = 1751
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 35/186 (18%)
Query: 28 ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
+L+ S++G D EW P S + RV+L+QL SD+ +L +SS
Sbjct: 323 SLNDGSVIGFDIEWPPTYS-KGKLGRVALIQLCV---------SDQK----CYLFHISS- 367
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNH 147
+ + LK L + I K G + D L S F +I +++ ++++ + N
Sbjct: 368 -MSGFPKGLKMLLENEAIRKAGVGIEGDQWKLLSDF-----EI---KLKSFVELADVANE 418
Query: 148 LHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAIDAHC 204
KL KE SL ++ K L + L K ++CS W PLTE+QK YAA DA+
Sbjct: 419 --------KLKCKEKWSLNSLVKHLFNKQLLKDKAIRCSSWDEFPLTEDQKLYAATDAYA 470
Query: 205 LIEIFN 210
I+
Sbjct: 471 GFIIYQ 476
>gi|154488712|ref|ZP_02029561.1| hypothetical protein BIFADO_02019 [Bifidobacterium adolescentis
L2-32]
gi|154082849|gb|EDN81894.1| 3'-5' exonuclease [Bifidobacterium adolescentis L2-32]
Length = 431
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ + ++ ++G
Sbjct: 133 LAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQGKME 192
Query: 224 SSISELDSSNLDLGL----KGILEKPDIGNKTVRFKLCEALDIIRA 265
+ E D + L GL + ++ + + T + +AL I+RA
Sbjct: 193 WAQEEFDYA-LKEGLGPRKEHLIPWMHVSHITEVMRDRQALAIVRA 237
>gi|270007326|gb|EFA03774.1| hypothetical protein TcasGA2_TC013885 [Tribolium castaneum]
Length = 890
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ N Q + L SLA + K+ +++ +K+ Q +DW RPL +E K+YA D H
Sbjct: 351 VVNMFDTHQAAKALQYPALSLAFLMKKFCNVTPNKQFQLADWRIRPLPDELKSYAREDTH 410
Query: 204 CLIEIFNIFQVKVAQKGNSCSSI 226
LI I+ + + ++ K N C +
Sbjct: 411 YLIYIYKMMKRELLHKTNKCDKL 433
>gi|417943263|ref|ZP_12586515.1| Ribonuclease D [Bifidobacterium breve CECT 7263]
gi|376165800|gb|EHS84740.1| Ribonuclease D [Bifidobacterium breve CECT 7263]
Length = 433
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 193
>gi|383819190|ref|ZP_09974466.1| 3'-5' exonuclease [Mycobacterium phlei RIVM601174]
gi|383337161|gb|EID15542.1| 3'-5' exonuclease [Mycobacterium phlei RIVM601174]
Length = 420
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL + L K +DWS RPL +E NYAA+D LI++ +
Sbjct: 138 GRLAGYEKVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEWLNYAALDVEVLIDLRHAVA 197
Query: 214 VKVAQKGNSCSSISELD 230
+ ++G S + E +
Sbjct: 198 AVLEEQGKSAWAAEEFE 214
>gi|339479014|gb|ABE95475.1| Ribonuclease D [Bifidobacterium breve UCC2003]
Length = 433
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 193
>gi|189096244|pdb|3CYM|A Chain A, Crystal Structure Of Protein Bad_0989 From Bifidobacterium
Adolescentis
Length = 440
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ + ++ ++G
Sbjct: 135 LAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQGKME 194
Query: 224 SSISELDSSNLDLGL----KGILEKPDIGNKTVRFKLCEALDIIRA 265
+ E D + L GL + ++ + + T + +AL I+RA
Sbjct: 195 WAQEEFDYA-LKEGLGPRKEHLIPWMHVSHITEVMRDRQALAIVRA 239
>gi|291456557|ref|ZP_06595947.1| ribonuclease D [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291381834|gb|EFE89352.1| ribonuclease D [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 433
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 193
>gi|210147550|ref|NP_957383.2| exosome component 10 [Danio rerio]
Length = 899
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F L
Sbjct: 336 FIID--TLELRSEMYILNETFTDPAIVKVFHGADSDIEWLQKDFG--------------L 379
Query: 140 DITSIYNHLHHKQ---LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ ++++ H + LGR SL ++ K D+S K Q +DW RPL +E
Sbjct: 380 YVVNMFDTHHAARCLNLGRN------SLDHLLKVYCDVSSDKRYQLADWRIRPLPDEMLK 433
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSS-ISELDSSNLDLGLK 239
YA D H L+ +++ + + GN ++ I ++ + + DL LK
Sbjct: 434 YAQADTHYLLYVYDRVRADLFDGGNGQATLIQQVWTKSRDLSLK 477
>gi|152996550|ref|YP_001341385.1| ribonuclease D [Marinomonas sp. MWYL1]
gi|150837474|gb|ABR71450.1| ribonuclease D [Marinomonas sp. MWYL1]
Length = 384
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
WE L+ L V P ++K+ CS+ D+ FDR+ + + + Q
Sbjct: 75 WEPLRNLMVDPSVMKVFHA------------CSEDLDV-FDRL-----LGVLPTPFYDTQ 116
Query: 153 LGRKLPKETKSLANI--CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+G SL+ + E L I ++K+ SDW RPLT+ QK YAA+D L +++
Sbjct: 117 IGEAYASAQWSLSYVKLIHEYLQIEVAKDETRSDWVQRPLTDAQKRYAALDVVYLAKVYP 176
Query: 211 IFQVKVAQKGNSCSSISE 228
+ Q+ + N + E
Sbjct: 177 M-QIARLEAKNMLGWVME 193
>gi|119026007|ref|YP_909852.1| hypothetical protein BAD_0989 [Bifidobacterium adolescentis ATCC
15703]
gi|118765591|dbj|BAF39770.1| hypothetical protein BAD_0989 [Bifidobacterium adolescentis ATCC
15703]
Length = 431
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ + ++ ++G
Sbjct: 133 LAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKRQGKME 192
Query: 224 SSISELDSSNLDLGL----KGILEKPDIGNKTVRFKLCEALDIIRA 265
+ E D + L GL + ++ + + T + +AL I+RA
Sbjct: 193 WAQEEFDYA-LKEGLGPRKEHLIPWMHVSHITEVMRDRQALAIVRA 237
>gi|226366248|ref|YP_002784031.1| ribonuclease [Rhodococcus opacus B4]
gi|226244738|dbj|BAH55086.1| putative ribonuclease [Rhodococcus opacus B4]
Length = 428
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L L K +DWS RPL + NYAA+D L+E+ N
Sbjct: 136 GRLAGFERVGLAAIVERTLGFELRKGHGAADWSKRPLPDTWLNYAALDVEVLVELRNAMA 195
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G S + E + L
Sbjct: 196 AELGEQGKSDWAAQEFEHIRL 216
>gi|302866117|ref|YP_003834754.1| 3'-5' exonuclease [Micromonospora aurantiaca ATCC 27029]
gi|315502675|ref|YP_004081562.1| 3'-5' exonuclease [Micromonospora sp. L5]
gi|302568976|gb|ADL45178.1| 3'-5' exonuclease [Micromonospora aurantiaca ATCC 27029]
gi|315409294|gb|ADU07411.1| 3'-5' exonuclease [Micromonospora sp. L5]
Length = 439
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL SL K +DWS+RPL E YAA+D L+++ + ++ ++
Sbjct: 162 ERVGLAALTEQLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLVDLRDSLDEELQRQ 221
Query: 220 GNSCSSISELDS 231
G S + E D+
Sbjct: 222 GKSGWAAEEFDA 233
>gi|189237006|ref|XP_966807.2| PREDICTED: similar to Rrp6 CG7292-PB [Tribolium castaneum]
Length = 947
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+ N Q + L SLA + K+ +++ +K+ Q +DW RPL +E K+YA D H
Sbjct: 351 VVNMFDTHQAAKALQYPALSLAFLMKKFCNVTPNKQFQLADWRIRPLPDELKSYAREDTH 410
Query: 204 CLIEIFNIFQVKVAQKGNSCSSI 226
LI I+ + + ++ K N C +
Sbjct: 411 YLIYIYKMMKRELLHKTNKCDKL 433
>gi|322799595|gb|EFZ20873.1| hypothetical protein SINV_12011 [Solenopsis invicta]
Length = 813
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S + +L+D ++ L S L E+F P ILK+ D+++L
Sbjct: 306 STITTDYLID--TLTLRSELHRLNEIFTKPSILKVFHGADMDILWLQRDLS--------- 354
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
+ N Q R+L SLA++ K+ DI L+K+ Q +DW RPL E
Sbjct: 355 --------LYVVNMFDTHQAARQLNLPYLSLAHLIKKYCDIDLNKQFQLADWRIRPLPLE 406
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
YA D L+ I ++ ++ N S+I
Sbjct: 407 LTRYAREDTRYLLYIKDMLNNELIDAANGKSNI 439
>gi|225352286|ref|ZP_03743309.1| hypothetical protein BIFPSEUDO_03902 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157533|gb|EEG70872.1| hypothetical protein BIFPSEUDO_03902 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 243
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L + LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ +
Sbjct: 124 RLLGMKRFGLAAVTEHYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETTMRA 183
Query: 215 KVAQKGNSCSSISELD 230
++ ++G + E D
Sbjct: 184 ELQKQGKIEWAEEEFD 199
>gi|379762965|ref|YP_005349362.1| ribonuclease D [Mycobacterium intracellulare MOTT-64]
gi|387876792|ref|YP_006307096.1| 3'-5' exonuclease [Mycobacterium sp. MOTT36Y]
gi|406031657|ref|YP_006730548.1| ribonuclease D [Mycobacterium indicus pranii MTCC 9506]
gi|443306584|ref|ZP_21036372.1| 3'-5' exonuclease [Mycobacterium sp. H4Y]
gi|378810907|gb|AFC55041.1| ribonuclease D [Mycobacterium intracellulare MOTT-64]
gi|386790250|gb|AFJ36369.1| 3'-5' exonuclease [Mycobacterium sp. MOTT36Y]
gi|405130204|gb|AFS15459.1| Ribonuclease D [Mycobacterium indicus pranii MTCC 9506]
gi|442768148|gb|ELR86142.1| 3'-5' exonuclease [Mycobacterium sp. H4Y]
Length = 430
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 200 EVLAGQGKTDWAAQEFD 216
>gi|379755419|ref|YP_005344091.1| ribonuclease D [Mycobacterium intracellulare MOTT-02]
gi|378805635|gb|AFC49770.1| ribonuclease D [Mycobacterium intracellulare MOTT-02]
Length = 430
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 200 EVLAGQGKTDWAAQEFD 216
>gi|384197155|ref|YP_005582899.1| 3'-5' exonuclease [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110648|gb|AEF27664.1| 3'-5' exonuclease [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 415
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ N+ + + G
Sbjct: 118 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELENLMRRDLRAAG 175
>gi|326521328|dbj|BAJ96867.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 906
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ E L+E+F P K+ +D+I+L F C++ FD
Sbjct: 327 LGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVCNL-FDT----------------G 369
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ + ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 370 QASRILQMDRNSLEHLLQYFCGVTANKEYQSADWRLRPLPDEMTKYAREDTHYLLYIYDL 429
Query: 212 FQVKVAQK 219
++++ +
Sbjct: 430 MRLRLVNE 437
>gi|28278907|gb|AAH45429.1| Zgc:55695 protein [Danio rerio]
Length = 500
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F L
Sbjct: 336 FIID--TLELRSEMYILNETFTDPAIVKVFHGADSDIEWLQKDFG--------------L 379
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ ++++ HH R L SL ++ K D+S K Q +DW RPL +E YA
Sbjct: 380 YVVNMFD-THHA--ARCLNLGRNSLDHLLKVYCDVSSDKRYQLADWRIRPLPDEMLKYAQ 436
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSS-ISELDSSNLDLGLK 239
D H L+ +++ + + GN ++ I ++ + + DL LK
Sbjct: 437 ADTHYLLYVYDRVRADLFDGGNGQATLIQQVWTKSRDLSLK 477
>gi|449462768|ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 936
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+++L F C++ FD Q R
Sbjct: 315 LREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNL-FDT----------------GQASR 357
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + ++ +KE Q +DW RPL EE YA D H L+ I+++ ++K
Sbjct: 358 VLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMK 417
Query: 216 VA 217
+A
Sbjct: 418 LA 419
>gi|449522510|ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 935
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+++L F C++ FD Q R
Sbjct: 315 LREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNL-FDT----------------GQASR 357
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + ++ +KE Q +DW RPL EE YA D H L+ I+++ ++K
Sbjct: 358 VLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMK 417
Query: 216 VA 217
+A
Sbjct: 418 LA 419
>gi|395334008|gb|EJF66384.1| ribonuclease H-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 419
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 28 ALSQ--SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
A+SQ S ++G D EW+P + V+L+QLA + + L+ +S
Sbjct: 64 AISQLDSKVLGFDLEWRPNFIKGNPENPVALVQLASE--------------DTILLIHVS 109
Query: 86 SIPLPSIWELLKELFVSPDILKLGFKFKQDL--IYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ + E LKEL + P+++K G ++D +++ ++ C +D++
Sbjct: 110 F--MHAFPEKLKELLLDPNVVKAGVGIQKDCKKLWIDHRVDTRNC----------VDLSL 157
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDA 202
+ + + + K L+ +C+ D++L+K ++Q S+W RPL Q+ YAA D
Sbjct: 158 LARTVDNARWKGKYANPI-GLSRLCETYEDLTLNKGKIQTSNWE-RPLDLRQQEYAANDC 215
Query: 203 HCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
H + ++ ++A+ + S + + D + G+L +P G
Sbjct: 216 HAGLVLYK----RLAEMATAMSPVPHRVWYSFDT-ISGMLYQPSSG 256
>gi|395541837|ref|XP_003772843.1| PREDICTED: Werner syndrome ATP-dependent helicase [Sarcophilus
harrisii]
Length = 1448
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 40/209 (19%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
++ S E+ + + LA L+ ++VG D EW P + +V+L+QL
Sbjct: 49 IIYSYEASDCSFLAEDIRMNLTDGAVVGFDIEWPPP-FWKGKSGKVALVQLCV------- 100
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P + LK L + + K G L
Sbjct: 101 ---SESKCYLFHVASMSVFP-----QGLKMLLENEAVKKAGMGIADQWKLLRD------- 145
Query: 129 DIGFD-RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDW 185
FD ++ ++++ S+ N + KET SL ++ K L L KE L+CS W
Sbjct: 146 ---FDIHLKSFVELASMANE-------KLRCKETWSLDSLVKHLFSKRLLKEQSLRCSRW 195
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
+ PLTE+QK YAAIDA+ + ++ +
Sbjct: 196 EDFPLTEDQKQYAAIDAYASLIVYQKLET 224
>gi|67537662|ref|XP_662605.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|40741889|gb|EAA61079.1| hypothetical protein AN5001.2 [Aspergillus nidulans FGSC A4]
gi|259482125|tpe|CBF76306.1| TPA: exosome complex exonuclease Rrp6, putative (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 1297
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+ILKL D+I+L D+G L + +++ +H
Sbjct: 293 QMLNEVFADPNILKLFHGSSMDIIWLQR-------DLG-------LYVVGMFD-TYHAAC 337
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
PK KSL + + ++ K+ Q +DW RPL NYA D H L+ I++
Sbjct: 338 ALNYPK--KSLKYLLHKFVNFEADKQYQMADWRIRPLPSGMFNYARSDTHYLLYIYD 392
>gi|327291874|ref|XP_003230645.1| PREDICTED: exosome component 10-like, partial [Anolis carolinensis]
Length = 329
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F+LD ++ L +L E F P I+K+ D+ +L F ++ FD
Sbjct: 122 FILD--ALELRGDLYVLNETFTDPAIIKVLHGADSDVEWLQRDFGLYLVNV-FDT----- 173
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
Q R+L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 174 -----------HQAARQLSLGRHSLDHLLKLYCNVDANKQYQLADWRIRPLPEEMLNYAR 222
Query: 200 IDAHCLIEIFNIFQVKVAQKGNS 222
D H L+ I++ + ++ ++GN
Sbjct: 223 DDTHYLLYIYDRVRTELWERGNE 245
>gi|268573492|ref|XP_002641723.1| Hypothetical protein CBG10060 [Caenorhabditis briggsae]
Length = 729
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 6 RKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGP 65
+ P+KI + T +E + + + VG D+E++P +N +V+ +QL
Sbjct: 363 KYPIKI-VKTESELEDLCVEMDEVENGTFVGYDSEFRPGHLTDTNTIKVATIQLCFH--- 418
Query: 66 RFNPESDESNASVVFLLDLSSIPLPS-IW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
++ ++L + LP +W L + +F S + +GF K D+ L S
Sbjct: 419 --------DTTYLIDCVELENEKLPDKMWIRLYQSIFESKKLTVVGFDLKHDIEALFSIH 470
Query: 124 -CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQC 182
Q I + +E ++ + L + ++ L N+ +ELLDI++ K Q
Sbjct: 471 PIRQQFKI--EDIENFVCVRRFSEILMEIDINILNLSKSCRLVNLSEELLDITIDKSEQN 528
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISEL 229
+W +RPL + Q YA +D+ ++++F +++AQK I +L
Sbjct: 529 GNWMSRPLRKSQIVYATMDSVVVLKVFEKV-LELAQKYEQPLEIDKL 574
>gi|254821715|ref|ZP_05226716.1| ribonuclease D [Mycobacterium intracellulare ATCC 13950]
gi|379748128|ref|YP_005338949.1| ribonuclease D [Mycobacterium intracellulare ATCC 13950]
gi|378800492|gb|AFC44628.1| ribonuclease D [Mycobacterium intracellulare ATCC 13950]
Length = 430
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 140 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 200 EVLAGQGKTDWAAQEFD 216
>gi|265755584|ref|ZP_06090205.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345516624|ref|ZP_08796113.1| hypothetical protein BSEG_03084 [Bacteroides dorei 5_1_36/D4]
gi|423232236|ref|ZP_17218637.1| hypothetical protein HMPREF1063_04457 [Bacteroides dorei
CL02T00C15]
gi|423241855|ref|ZP_17222966.1| hypothetical protein HMPREF1065_03589 [Bacteroides dorei
CL03T12C01]
gi|423242747|ref|ZP_17223823.1| hypothetical protein HMPREF1064_00029 [Bacteroides dorei
CL02T12C06]
gi|229436866|gb|EEO46943.1| hypothetical protein BSEG_03084 [Bacteroides dorei 5_1_36/D4]
gi|263234190|gb|EEZ19783.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392624537|gb|EIY18617.1| hypothetical protein HMPREF1063_04457 [Bacteroides dorei
CL02T00C15]
gi|392640383|gb|EIY34184.1| hypothetical protein HMPREF1065_03589 [Bacteroides dorei
CL03T12C01]
gi|392647190|gb|EIY40894.1| hypothetical protein HMPREF1064_00029 [Bacteroides dorei
CL02T12C06]
Length = 216
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 35/198 (17%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V TES +A L +VG+D E +P + +V+LLQ++ Q
Sbjct: 26 FVIYTESEAEKAVA-YLKDQRIVGVDTETRPSFKRGTTH-KVALLQISTQ---------- 73
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
FL L+ I +P + L+E +S D LK+G K D L
Sbjct: 74 ----DTCFLFRLNRIGMP---DSLQEFLMS-DTLKIGLSLKDDFNSLRKR---------- 115
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
+ V P N + + + +SL I L D +SK + S+W L+E
Sbjct: 116 ENVHP-----DRGNWIELQDYVGRFGIADRSLQKIFANLFDQKISKSQRLSNWEADVLSE 170
Query: 193 EQKNYAAIDAHCLIEIFN 210
QK YAA DA +EI+N
Sbjct: 171 GQKLYAATDAWACVEIYN 188
>gi|218439906|ref|YP_002378235.1| 3'-5' exonuclease [Cyanothece sp. PCC 7424]
gi|218172634|gb|ACK71367.1| 3'-5' exonuclease [Cyanothece sp. PCC 7424]
Length = 308
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
T+S + L L++ ++ LD E S +S R+SL+Q+ P +++N
Sbjct: 5 TQSEDIQALIDDLTEVKILWLDTESTDLNSKKS---RLSLIQVLAYP--------EDTNG 53
Query: 77 SVVFLLDLSSIPLPSIWE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDR 134
S ++ D+ + P I + ++++ V+ I K+ + DL +L C + +
Sbjct: 54 SRTYIFDV--LDNPDIVDYFIEKIMVNDQINKIFHNAQHDLQFLGGKKAKNVTCTLKLSK 111
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDI-SLSKELQCSDWSNRPLTEE 193
PY H+ LP +L + + L D ++SKE Q SDWS RPL+++
Sbjct: 112 TIPY--------HI--------LPVPNHTLKTLTEYLTDFKNVSKEEQTSDWSQRPLSQK 155
Query: 194 QKNYAAIDAHCLIEI 208
Q +YA +D L I
Sbjct: 156 QLDYAKMDPVYLAHI 170
>gi|402586210|gb|EJW80148.1| hypothetical protein WUBG_08943, partial [Wuchereria bancrofti]
Length = 483
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 78 VVFLLDLSSIPLPSIW-ELLKELFVSPDILKLGFKFKQDLIYLSSTF------------- 123
+V ++ L ++ W K LF +KLGF F DL L ++F
Sbjct: 14 LVDVITLENVLTEEQWTRFFKALFSYSTAIKLGFDFLNDLKVLRASFPYLQPLEEMKNVI 73
Query: 124 CSQGCDIGFDRVEP-YLDITSIYN---HLHHKQLGRKLPKETKS--LANICKELLDISLS 177
C P +LD + N + L + ET L ++C+++L +L
Sbjct: 74 CILKLVKSLLASNPAFLDFSHSTNLPLSTETENLLDIVSDETVHFRLTDLCQKVLGQALD 133
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
K Q +W+ RPL EQ YAA+D +CL+ ++N +++ + N
Sbjct: 134 KTEQIGNWAMRPLRREQMKYAAMDGYCLLNLYNKLKIRAERDYN 177
>gi|342880534|gb|EGU81622.1| hypothetical protein FOXB_07858 [Fusarium oxysporum Fo5176]
Length = 860
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L ++F P+++K+ D+++L D+G V D LH+
Sbjct: 309 EVLNQVFTDPNVVKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFACEQLHYP-- 358
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
KSLA + + +D K+ Q +DW RPL EE YA D H L+ I++
Sbjct: 359 -------AKSLAYLLSKFVDFDADKQYQLADWRIRPLPEEMMYYARSDTHYLLYIYD 408
>gi|359481017|ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
Length = 931
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 24/138 (17%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 311 LREVFKDPTKKKVMHGADRDIIWLQRDFGIYICNM-FDT----------------GQASR 353
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ ++ +KE Q DW RPL E YA D H L+ I+++ + +
Sbjct: 354 VLKLERNSLEHLLHHYCGVTANKEYQNGDWRLRPLPHEMLRYAREDTHYLLHIYDLMRTQ 413
Query: 216 VAQKGNSCSSISELDSSN 233
+ S++EL++SN
Sbjct: 414 LL-------SMAELENSN 424
>gi|453363937|dbj|GAC80252.1| ribonuclease D [Gordonia malaquae NBRC 108250]
Length = 404
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + L + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 127 GRLLNVPKVNLAAMVAGFLHLGLAKGHGAADWSQRPLPDDWLNYAALDVEVLVELRDAVS 186
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATSYYS 270
+ + G + E +L +P K R++ L+ ++ T Y+
Sbjct: 187 AALREAGRETWAAQE---------FAAVLARPAPEPKPDRWRRTSNLNTLKTTREYA 234
>gi|376297792|ref|YP_005169022.1| 3'-5' exonuclease [Desulfovibrio desulfuricans ND132]
gi|323460354|gb|EGB16219.1| 3'-5' exonuclease [Desulfovibrio desulfuricans ND132]
Length = 204
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
LV TES + + SSL+G D E +P SLLQLA
Sbjct: 34 LVVRTES-DLEQALSGMRASSLLGFDTETRPVFKKGKKPGPPSLLQLA------------ 80
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
A ++ L +PL + + ++ + ILK G + D++ L
Sbjct: 81 --TAECAYVFQLGVLPLD---KGVCDILANRRILKTGVAVRDDILGLQK----------H 125
Query: 133 DRVEP--YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
R +P ++D++SI K +T L N+ LL +SK QCS+W+ L
Sbjct: 126 ARFKPSGFVDLSSITA---------KYNLQTHGLRNMAANLLGFRISKSAQCSNWAKDKL 176
Query: 191 TEEQKNYAAIDAHCLIEIF 209
+ +Q YAA DA E++
Sbjct: 177 SRQQVLYAATDAWISRELY 195
>gi|242001434|ref|XP_002435360.1| 3-5 exonuclease, putative [Ixodes scapularis]
gi|215498690|gb|EEC08184.1| 3-5 exonuclease, putative [Ixodes scapularis]
Length = 587
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 37/193 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV----- 79
R ++ ++GLD+EW + H+ RV+LLQLA +N SV+
Sbjct: 50 FCRLCREAGVLGLDSEWTTVQGHRH---RVALLQLA-----------PNANFSVLLRLCQ 95
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F + S++ LP E L+++ I+K+G D L D G D V L
Sbjct: 96 FTEEASTVTLP---ESLRDILKDVKIIKVGVGVIDDAHKLFQ-------DYGID-VWGCL 144
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNY 197
D+ L +LG PK L ++ + LL +S K L+CS+W LTE+Q Y
Sbjct: 145 DLRHALGCL--PELGH-FPK--VGLRSLSESLLGVSPDKSWRLRCSNWEADVLTEKQIRY 199
Query: 198 AAIDAHCLIEIFN 210
AA DA ++IF+
Sbjct: 200 AADDALLAVQIFD 212
>gi|451998468|gb|EMD90932.1| hypothetical protein COCHEDRAFT_1102884 [Cochliobolus
heterostrophus C5]
Length = 679
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 58/235 (24%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
L IH S + E +A+ + +VG D EWKP + + SL+QLAC+
Sbjct: 197 LSIHYCKSFDVAE--RVAQYFLKEKVVGFDIEWKPYGNPHAIKQNASLIQLACE------ 248
Query: 69 PESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFC 124
+ L +S + +L LK + SPD++K+G K D
Sbjct: 249 --------DRIALFHISLFSGYKVEQLMPPSLKAVLESPDVIKVGVAIKGD--------- 291
Query: 125 SQGCDIGFDRVEPYL--------DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDIS 175
F RVE YL +++ ++N + +K K+ SLA + L +
Sbjct: 292 -------FKRVEKYLGVRPQGVFELSRLHNLVEWYKVDPSKVSNRLVSLATQVLQHLQLP 344
Query: 176 LSKELQC------------SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
L K Q SDWS PL +Q +YAA DA+ +++I + K A+
Sbjct: 345 LYKGEQLEDDEDTTSSVRESDWS-LPLNLQQIHYAAADAYAGFRLYHILERKRAR 398
>gi|313140484|ref|ZP_07802677.1| ribonuclease D [Bifidobacterium bifidum NCIMB 41171]
gi|421735613|ref|ZP_16174522.1| ribonuclease D [Bifidobacterium bifidum IPLA 20015]
gi|313132994|gb|EFR50611.1| ribonuclease D [Bifidobacterium bifidum NCIMB 41171]
gi|407297096|gb|EKF16569.1| ribonuclease D [Bifidobacterium bifidum IPLA 20015]
Length = 428
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKSQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|198421501|ref|XP_002119853.1| PREDICTED: similar to exosome component 10, partial [Ciona
intestinalis]
Length = 647
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 39/234 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L ++S + +D E RS+Q L+QL S + +++D
Sbjct: 76 LMDELKEASEIAVDLEAHSYRSYQG---ITCLMQL--------------STRTKDYIVD- 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+I L + +L ++F +P+I+K+ D+I+L F +
Sbjct: 118 -TIALRAELNILNQVFANPNIIKVFHGADSDIIWLQRDFG-----------------IYV 159
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
N Q R L + SL + ++ K+ Q +DW RPL +E YA D H
Sbjct: 160 VNLFDTGQAARALGLQRHSLDYLLTHYCNVQADKKYQLADWRIRPLPKEMLLYAQGDTHY 219
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCE 258
L+ ++++ ++ + + G+ +D S LK EKP I N T L E
Sbjct: 220 LLYVYDMMRLDLVKTGDPGLLHKVIDKSRDICCLK--YEKP-ITNDTSHLVLLE 270
>gi|110289135|gb|AAP53938.2| Nucleolar protein, putative, expressed [Oryza sativa Japonica
Group]
Length = 902
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E+F P K+ +D+I+L F C++ FD
Sbjct: 322 LGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 364
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 365 QASRILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDL 424
Query: 212 FQVKVAQK 219
++++ ++
Sbjct: 425 MRLRLVKE 432
>gi|421734277|ref|ZP_16173355.1| ribonuclease D [Bifidobacterium bifidum LMG 13195]
gi|407077784|gb|EKE50612.1| ribonuclease D [Bifidobacterium bifidum LMG 13195]
Length = 428
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKAQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|452978276|gb|EME78040.1| hypothetical protein MYCFIDRAFT_107101, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 799
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P+ILK+ D+I+L D+G L + +++ HH R
Sbjct: 294 LNEVFADPNILKVLHGAYMDIIWLQR-------DLG-------LYLVGLFD-THHA--AR 336
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L SLA + K + K+ Q +DW RPL + +YA D H L+ IF+ + +
Sbjct: 337 ALGYPAGSLAYLLKRFAGVDAQKKYQTADWRVRPLPQALFDYARSDTHYLLYIFDNLRNE 396
Query: 216 VAQKGN 221
+ Q+ +
Sbjct: 397 LIQRSD 402
>gi|311064600|ref|YP_003971325.1| ribonuclease D [Bifidobacterium bifidum PRL2010]
gi|310866919|gb|ADP36288.1| Ribonuclease D [Bifidobacterium bifidum PRL2010]
Length = 428
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKAQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|54025710|ref|YP_119952.1| RNase D [Nocardia farcinica IFM 10152]
gi|54017218|dbj|BAD58588.1| putative RNase D [Nocardia farcinica IFM 10152]
Length = 424
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 147 HLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L +LG +L E LA + + LL +L K +DWS RPL E NYAA+D L
Sbjct: 124 RLFDTELGGRLAGFERVGLAAMVERLLGRTLRKGHGAADWSTRPLPAEWLNYAALDVELL 183
Query: 206 IEIFNIFQVKVAQKGNSCSSISELD 230
+E+ + ++ ++G S + E +
Sbjct: 184 LELRDAVAAELQRQGKSDWAAQEFE 208
>gi|393781320|ref|ZP_10369520.1| hypothetical protein HMPREF1071_00388 [Bacteroides salyersiae
CL02T12C01]
gi|392676904|gb|EIY70325.1| hypothetical protein HMPREF1071_00388 [Bacteroides salyersiae
CL02T12C01]
Length = 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 42/196 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSH-QSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSI 87
L ++G+D+E +P + QS+ +V+LLQ++ SDE FL L+
Sbjct: 40 LQAQQILGIDSETRPSFTKGQSH--KVALLQIS----------SDE----CCFLFRLN-- 81
Query: 88 PLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGCDIGFDRVEPYLDITSIY 145
+ + + L L +P+I+K+G + D + L + F QGC D V P+
Sbjct: 82 -MTGLTQSLIGLLENPEIIKVGLSLRDDFMMLHKRAPFNQQGCIELQDFVRPF------- 133
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
+ KSL I L +SK + S+W LT+ QK YAA DA
Sbjct: 134 ------------GIQDKSLQKIYGILFKEKISKSQRLSNWEADVLTDAQKQYAATDAWAC 181
Query: 206 IEIFNIFQVKVAQKGN 221
+ I+N Q ++ + GN
Sbjct: 182 LNIYNRLQ-ELKRTGN 196
>gi|346973710|gb|EGY17162.1| hypothetical protein VDAG_00844 [Verticillium dahliae VdLs.17]
Length = 804
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P I+K+ D+ +L D+G L I +++ ++
Sbjct: 280 EVLNEVFTDPKIVKVFHGAHMDMQWLQR-------DLG-------LYINGLFDTFFAAEI 325
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
L +SLA + K +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 326 ---LGYPQRSLAYLLKRFVDFDADKKYQMADWRIRPLPEEMFYYARSDTHYLLYIFD 379
>gi|242767043|ref|XP_002341292.1| exosome component 3'-5' exonuclease [Talaromyces stipitatus ATCC
10500]
gi|218724488|gb|EED23905.1| exosome complex exonuclease Rrp6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 771
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P+ILK+ D+++L D+G L + S+++ +H +
Sbjct: 293 LNEVFTDPNILKVFHGSTMDIVWLQR-------DLG-------LYVVSLFD-TYHAAVAL 337
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
PK +SL + ++ K+ Q +DW RPLT+E YA D H L+ I++ + +
Sbjct: 338 GFPK--RSLKFLLEKYAHYEADKKYQMADWRLRPLTDEMLKYARADTHYLLYIYDCLRNE 395
Query: 216 VAQKGN 221
+ +K
Sbjct: 396 LLEKST 401
>gi|449304144|gb|EMD00152.1| hypothetical protein BAUCODRAFT_366269 [Baudoinia compniacensis
UAMH 10762]
Length = 774
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F +P ILK+ D+I+L D+G YL + H + LG
Sbjct: 272 LNEVFANPSILKVLHGAYMDVIWLQR-------DLGL-----YL-VGLFDTHYACRALGY 318
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
SLA + K+ ++ K+ Q +DW RPL +E +YA D H L+ IF+ + +
Sbjct: 319 A----GASLAFLLKKFANVDAQKQYQTADWRIRPLPQELLDYARSDTHYLLYIFDNMRNE 374
Query: 216 VAQKGN 221
+ Q+
Sbjct: 375 LVQRST 380
>gi|237708989|ref|ZP_04539470.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229457051|gb|EEO62772.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 221
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 35/198 (17%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V TES +A L +VG+D E +P + +V+LLQ++ Q
Sbjct: 31 FVIYTESEAEKAVA-YLKDQRIVGVDTETRPSFKRGTTH-KVALLQISTQ---------- 78
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
FL L+ I +P + L+E +S D LK+G K D L
Sbjct: 79 ----DTCFLFRLNRIGMP---DSLQEFLMS-DTLKIGLSLKDDFNSLRKR---------- 120
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
+ V P N + + + +SL I L D +SK + S+W L+E
Sbjct: 121 ENVHP-----DRGNWIELQDYVGRFGIADRSLQKIFANLFDQKISKSQRLSNWEADVLSE 175
Query: 193 EQKNYAAIDAHCLIEIFN 210
QK YAA DA +EI+N
Sbjct: 176 GQKLYAATDAWACVEIYN 193
>gi|218184595|gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indica Group]
Length = 854
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E+F P K+ +D+I+L F C++ FD
Sbjct: 274 LGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 316
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 317 QASRILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDL 376
Query: 212 FQVKVAQK 219
++++ ++
Sbjct: 377 MRLRLVKE 384
>gi|71027523|ref|XP_763405.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350358|gb|EAN31122.1| hypothetical protein TP03_0385 [Theileria parva]
Length = 996
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L L P ILK+ D+++L F + N ++ +
Sbjct: 536 LNRLTTDPKILKIMHGASNDVVWLQRDFN-----------------IFVVNLFDTREAAK 578
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L +SLA + ++ +I L+K Q SDWS RPL E +YA D+H LI +++ + +
Sbjct: 579 VLNLAEQSLAKLIQKYFNIKLNKRFQLSDWSKRPLDAEMLDYACCDSHYLIPLYSALKDE 638
Query: 216 VAQKGNSCSSISELDSSNLDLGLKGILEK-PDIGNKTVRFKLCEALDIIR--ATSYYSQC 272
+ K + I ++ ++ + LK +++ P+I K FK IR + S
Sbjct: 639 ILSKEDGRVKIIQVMNNGRETCLKQYVDRGPEIYKK---FKSISKRHKIRIPELDFVSYN 695
Query: 273 LPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLR 307
L +++ ++L +D+S I+R Y ++++
Sbjct: 696 LLLNLIAFRNFL-ARKLDKSEKLIIRDYQIALIIK 729
>gi|296085897|emb|CBI31221.3| unnamed protein product [Vitis vinifera]
Length = 901
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 24/138 (17%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 281 LREVFKDPTKKKVMHGADRDIIWLQRDFGIYICNM-FDT----------------GQASR 323
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ ++ +KE Q DW RPL E YA D H L+ I+++ + +
Sbjct: 324 VLKLERNSLEHLLHHYCGVTANKEYQNGDWRLRPLPHEMLRYAREDTHYLLHIYDLMRTQ 383
Query: 216 VAQKGNSCSSISELDSSN 233
+ S++EL++SN
Sbjct: 384 LL-------SMAELENSN 394
>gi|212692047|ref|ZP_03300175.1| hypothetical protein BACDOR_01542 [Bacteroides dorei DSM 17855]
gi|212665439|gb|EEB26011.1| 3'-5' exonuclease [Bacteroides dorei DSM 17855]
Length = 216
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 35/198 (17%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V TES +A L +VG+D E +P + +V+LLQ++ Q
Sbjct: 26 FVIYTESEAEKAVA-YLKDQRIVGVDTETRPSFKRGTTH-KVALLQISTQ---------- 73
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
FL L+ I +P+ L+E +S D LK+G K D L
Sbjct: 74 ----DTCFLFRLNRIGMPNS---LQEFLMS-DTLKIGLSLKDDFNSLRKR---------- 115
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
+ V P N + + + +SL I L D +SK + S+W L+E
Sbjct: 116 ENVHP-----DRGNWIELQDYVGRFGIADRSLQKIFANLFDQKISKSQRLSNWEADVLSE 170
Query: 193 EQKNYAAIDAHCLIEIFN 210
QK YAA DA +EI+N
Sbjct: 171 GQKLYAATDAWACVEIYN 188
>gi|254776017|ref|ZP_05217533.1| ribonuclease D [Mycobacterium avium subsp. avium ATCC 25291]
Length = 416
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL L+K +DWS RPL E NYAA+D LIE+
Sbjct: 123 GRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIA 182
Query: 214 VKVAQKGNSCSSISELD 230
+A +G + + E D
Sbjct: 183 DVLAGQGKTDWAAQEFD 199
>gi|332670632|ref|YP_004453640.1| 3'-5' exonuclease [Cellulomonas fimi ATCC 484]
gi|332339670|gb|AEE46253.1| 3'-5' exonuclease [Cellulomonas fimi ATCC 484]
Length = 424
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 146 NHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+ +LG R L E LA + + L + L+KE DWS RPL +E YAA+D
Sbjct: 130 TRIFDTELGARLLGMERVGLAAVVADALGLGLAKEHSAVDWSTRPLPQEWLRYAALDVEV 189
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDS 231
L+ + + ++A G + + E ++
Sbjct: 190 LVPLREVLAERLAVAGKAEWAAQEFEA 216
>gi|167628093|ref|YP_001678593.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167598094|gb|ABZ88092.1| ribonuclease D [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 366
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
+ + ++ L +S + +D E+ R++ +P + L+Q+A +
Sbjct: 6 NKQLNNVIEILKSTSQIAVDTEFYWMRTY---YPELCLVQIATENE-------------- 48
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L + LK++F +I K+ D+ + F C++
Sbjct: 49 IFLIDTLEDLDFSK----LKDIFEDTNIQKIIHSATNDIPIIKRFF---DCEV------- 94
Query: 138 YLDITSIYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
N++ QL + SL + K++LDI + KE Q SDW RPL+++Q
Sbjct: 95 --------NNIFDTQLAASFLGTQSQISLKALLKDILDIEMEKESQFSDWRKRPLSQKQF 146
Query: 196 NYAAIDAHCLIEI 208
+YA D LIEI
Sbjct: 147 DYALKDVKHLIEI 159
>gi|409075144|gb|EKM75528.1| hypothetical protein AGABI1DRAFT_79866 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 882
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D+ I L E+L E+F P I+K+ + D+++L F L
Sbjct: 292 FVVDV--IALRDEMEVLNEVFTDPKIVKVFHGAESDIVWLQQDFN--------------L 335
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ ++++ H +L + P+ LAN+ + D K Q +DW RPL +E YA
Sbjct: 336 YVVNLFDTYHASKL-LEFPRH--GLANLLEMYCDYIPDKRYQLADWRIRPLPKEMLEYAR 392
Query: 200 IDAHCLIEIFNIFQVKVAQKG 220
D H L+ I++ + + +G
Sbjct: 393 SDTHFLLFIYDNLRNALLDRG 413
>gi|221057512|ref|XP_002261264.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247269|emb|CAQ40669.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 738
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
KSL ++C+++L L+K+LQ S+WS RPL E Q YAA DA+ LI
Sbjct: 656 KSLNHLCQQILGKKLNKQLQLSNWSRRPLMESQICYAATDAYVLI 700
>gi|167535101|ref|XP_001749225.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772378|gb|EDQ86031.1| predicted protein [Monosiga brevicollis MX1]
Length = 411
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
SLA++ + L+ +SL+K Q +DW RPL E +YAA+DA+ L+++ +I KV G
Sbjct: 342 SLADLVQGLVGVSLAKHEQLADWERRPLRPESLHYAALDAYVLLQVLDILS-KVQATGQ 399
>gi|163782924|ref|ZP_02177919.1| DNA polymerase I (PolI) [Hydrogenivirga sp. 128-5-R1-1]
gi|159881604|gb|EDP75113.1| DNA polymerase I (PolI) [Hydrogenivirga sp. 128-5-R1-1]
Length = 576
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+F++DL LP ++LKEL ++ KF +Y +G + PY
Sbjct: 47 IFVIDL--FDLPEAVDVLKELIAKKGVVGHNLKFDLKFMY----------PLG---IVPY 91
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
++ L E SL+++ + LL ++ K LQ SDWS LT++Q YA
Sbjct: 92 ATFDTMIGSF-------LLGYERHSLSHVAERLLGYTMDKSLQLSDWSRTALTKQQIEYA 144
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNS 222
A D + E+F + K+ G +
Sbjct: 145 ATDVLVVRELFYKMREKLNALGET 168
>gi|390937080|ref|YP_006394639.1| 3'-5' exonuclease [Bifidobacterium bifidum BGN4]
gi|389890693|gb|AFL04760.1| 3'-5' exonuclease [Bifidobacterium bifidum BGN4]
Length = 456
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++L+KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 160 GLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKSQGKD 219
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 220 GWADEEFRYA-LQTGMGPRREHP 241
>gi|222612881|gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japonica Group]
Length = 877
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E+F P K+ +D+I+L F C++ FD
Sbjct: 297 LGDYLREIFKDPTKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 339
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 340 QASRILQMDRNSLEHLLHHFCGVTANKEYQSADWRLRPLPDEMIKYAREDTHYLLYIYDL 399
Query: 212 FQVKVAQK 219
++++ ++
Sbjct: 400 MRLRLVKE 407
>gi|400536794|ref|ZP_10800328.1| ribonuclease D [Mycobacterium colombiense CECT 3035]
gi|400329807|gb|EJO87306.1| ribonuclease D [Mycobacterium colombiense CECT 3035]
Length = 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL L+K +DWS RPL E NYAA+D LIE+ +A++G +
Sbjct: 151 NLATMVERLLGFGLAKGHGAADWSKRPLPAEWLNYAALDVELLIELRAAIADVLAEQGKT 210
Query: 223 CSSISELD 230
+ E D
Sbjct: 211 DWAAQEFD 218
>gi|116747862|ref|YP_844549.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
gi|116696926|gb|ABK16114.1| 3'-5' exonuclease [Syntrophobacter fumaroxidans MPOB]
Length = 295
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 82/196 (41%), Gaps = 38/196 (19%)
Query: 14 VTSTESP-EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
V E P E L R LS + + +D E S + F RV L+Q++ +PE D
Sbjct: 4 VVVIEKPSELDALVRQLSTARHLAVDTE---SNSFYAYFDRVCLIQIS-------SPERD 53
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
+++D S+ S+ L LF +P I K+ D++ L F
Sbjct: 54 -------YIIDPLSLKDLSV---LGRLFENPRIEKVLHAASNDVLGLRRDFQF------- 96
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
R D L +KQLG L+ I + +SL+K Q DW RPL
Sbjct: 97 -RFNGLFDTAIACKLLGYKQLG---------LSKILETHFGVSLNKRWQRYDWGKRPLVP 146
Query: 193 EQKNYAAIDAHCLIEI 208
+Q +YA +D H LI +
Sbjct: 147 DQLDYARLDTHYLIAL 162
>gi|358394505|gb|EHK43898.1| hypothetical protein TRIATDRAFT_172602, partial [Trichoderma
atroviride IMI 206040]
Length = 816
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+++L D+G V D + LH+
Sbjct: 286 QVLNEVFADPTIVKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFASDALHYS-- 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
++SLA + + ++ K Q +DW RPL+EE YA D H L+ I++ +
Sbjct: 336 -------SRSLAFLLSKFVNFDADKRYQLADWRIRPLSEEMMFYARSDTHYLLYIYDKIR 388
Query: 214 VKVAQKGNS 222
++ Q +S
Sbjct: 389 NELVQSSDS 397
>gi|383457201|ref|YP_005371190.1| ATP-dependent helicase [Corallococcus coralloides DSM 2259]
gi|380733211|gb|AFE09213.1| ATP-dependent helicase [Corallococcus coralloides DSM 2259]
Length = 917
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
SLA +C+ L I L K Q S+WS RPL +Q +YAA+DA L+ +++ F+
Sbjct: 855 SLAMVCERELGIVLDKSSQTSNWSRRPLEADQLSYAALDAEILLALYDRFK 905
>gi|308810304|ref|XP_003082461.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
gi|116060929|emb|CAL57407.1| Exosome 3'-5' exoribonuclease complex, subunit PM/SCL-100 (Rrp6)
(ISS) [Ostreococcus tauri]
Length = 701
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 78 VVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
VV +L L S+ + + L + F P+ LK+ D+ +L F
Sbjct: 170 VVDVLALRSL----VRDALGKAFADPNTLKVMHGADNDVQWLQKDFG------------- 212
Query: 138 YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
+ ++ +++ Q R L +K+LA + + I +K+ Q +DW RPLT E +Y
Sbjct: 213 -IFVSCLFDT---GQAARVLELPSKALAYLLQHYCGIKANKKFQLADWRVRPLTREMLDY 268
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL 242
A D H L+ +++ + +A +G +SI+ + + D+ LK L
Sbjct: 269 ARGDTHYLLYVYDELKKALAARGE--NSIAATLTQSRDVCLKKYL 311
>gi|371775971|ref|ZP_09482293.1| 3'-5' exonuclease [Anaerophaga sp. HS1]
Length = 195
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 13 LVTSTESP-EFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPE 70
++ E+P + +A L + ++G D E KP + SN +SLLQL+ +
Sbjct: 22 VINVIENPLQADAIAEKLQKEKIIGFDTETKPSFKKGVSN--NISLLQLSTE-------- 71
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGC 128
+ +F L+++ L L +P I K+G + DL L F +G
Sbjct: 72 ----EEAFLFRLNITGFNGE-----LTRLLSNPKIKKIGVGIRDDLRGLQRLKKFTPKG- 121
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
++DI ++L K E SL ++ LL I +SK + S+W
Sbjct: 122 ---------FVDI---------QELAPKYGIEVLSLKSLAGLLLGIRISKRQRLSNWEAD 163
Query: 189 PLTEEQKNYAAIDAHCLIEIFN 210
L+E QK YAA DA ++I+N
Sbjct: 164 ALSEGQKLYAATDAWAALKIYN 185
>gi|221121078|ref|XP_002157951.1| PREDICTED: exosome component 10-like [Hydra magnipapillata]
Length = 758
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
+ E+F P+ILK+ D+ +L F + N Q R
Sbjct: 305 INEIFSDPNILKVMHGADSDIGWLQRDFG-----------------VYVVNMFDTGQAAR 347
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L ++ SLA + + ++ K+ Q +DW RP+ +E YA D H L+ +++I + +
Sbjct: 348 TLHEDRFSLAYLLSKYCNVDAQKQYQLADWRIRPIPKEMILYAQEDTHYLLYVYDILRNQ 407
Query: 216 VAQKGNSCSSI 226
+ KGN+ ++
Sbjct: 408 LLNKGNANKNL 418
>gi|162147898|ref|YP_001602359.1| ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
gi|161786475|emb|CAP56057.1| putative ribonuclease D [Gluconacetobacter diazotrophicus PAl 5]
Length = 210
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA +C+ELL + LSK+ Q SDW LT EQK YAA D L ++ +V + ++
Sbjct: 117 ERHGLAQLCRELLGVDLSKQQQTSDWGAPELTPEQKAYAASDVLHLHALWTKLEVLLHRE 176
Query: 220 GN 221
G
Sbjct: 177 GR 178
>gi|299473101|emb|CBN77494.1| 3\'-5\' exonuclease family protein [Ectocarpus siliculosus]
Length = 192
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
S+ E L F SP+++KLG DL +S F ++V L++ ++ L
Sbjct: 52 SLSEALSGPFGSPNVVKLGVGLANDLDEMSFAFEETPF---LEQVPGVLNLNALNTKLTG 108
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ L + L SLSK Q S W+ RPL Q NYAA DA + +F+
Sbjct: 109 GACNDQGIPRDLGLRKLASMYLGRSLSKRQQMSRWARRPLQSAQVNYAACDALVALRVFD 168
>gi|392560526|gb|EIW53709.1| ribonuclease H-like protein [Trametes versicolor FP-101664 SS1]
Length = 487
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 32/182 (17%)
Query: 34 LVGLDAEW----KPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL 89
++G D EW + RS S+ R +L+Q+ C +A ++ L+ +S+ +
Sbjct: 134 VMGFDLEWVVLFRKGRSAMSH--RTALVQI-C-------------DARMILLVHVSA--M 175
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
+ +KEL + DI KLG K D L + ++ +++ ++ +
Sbjct: 176 KKFPQKVKELIENKDIAKLGANIKNDGQKLFRDYGILARNL--------VELGAVARQVD 227
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + SLA + + +LSK ++ S+W +PL+E QK YAA DAHC + +
Sbjct: 228 -PSFAKAHKRSIVSLAKVVETYTQKTLSKGPVRTSNWETKPLSESQKFYAANDAHCALVV 286
Query: 209 FN 210
+N
Sbjct: 287 YN 288
>gi|344234698|gb|EGV66566.1| hypothetical protein CANTEDRAFT_128954 [Candida tenuis ATCC 10573]
Length = 737
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 38/202 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ L LS SS + +D E R++ + V L+Q++ + +
Sbjct: 219 QIDELVNELSNSSEIAVDLEHHDYRTY---YGLVCLMQISTRKKD--------------W 261
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
++D ++ L + L +F +P I+K+ D+I+L D+G L
Sbjct: 262 IID--TLALRDDLQKLNVVFTNPQIVKVFHGAFMDIIWLQR-------DLG-------LY 305
Query: 141 ITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I S+++ H K+LG PK SLA + + SK+ Q +DW RPL+ YA
Sbjct: 306 IVSLFDTYHASKKLG--FPK--FSLAYLLETFAKFKTSKKYQLADWRIRPLSTSMLAYAR 361
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ IF+ + K+ +GN
Sbjct: 362 SDTHFLLNIFDHLKNKLIDQGN 383
>gi|261855126|ref|YP_003262409.1| ribonuclease D [Halothiobacillus neapolitanus c2]
gi|261835595|gb|ACX95362.1| ribonuclease D [Halothiobacillus neapolitanus c2]
Length = 374
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 50/243 (20%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
+++S+ +D E+ + ++ FP++ L+Q+A P++ ++L+D ++P
Sbjct: 29 IAESTWATIDTEFMRESTY---FPQLCLVQIAT-------PDA-------IWLIDPLAVP 71
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
L +W L SP + +QDL + YLD ++ L
Sbjct: 72 LAPLWHELNRT-SSPLVFHAA---EQDLELI------------------YLDSGALPQTL 109
Query: 149 HHKQLGRKLPK--ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
Q+ E AN+ LL + L K ++W+ RPLT EQ++YAA D L
Sbjct: 110 RDSQIAAAFLGLGEQIGYANLVNRLLHVELDKSQSRTNWAQRPLTAEQQHYAADDVRFLR 169
Query: 207 EIFNIFQVKVAQKG------NSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEAL 260
++ + + ++A K C+++S D + G+ K G + +R L
Sbjct: 170 SMYPLLREQLATKNRLAWFDEECAALS--DPQRFQPQMTGLWRKVR-GQQALRAAQRAVL 226
Query: 261 DII 263
D I
Sbjct: 227 DAI 229
>gi|453081050|gb|EMF09100.1| 3_5_exonuc-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 782
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P I+K+ D+++L D+G L I +++ H +
Sbjct: 282 LNEVFADPGIIKVLHGAFMDIMWLQR-------DLG-------LYIVGLFDTFHAASV-- 325
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L +SLA + K+ ++ K+ Q +DW RPL E +YA D H L+ IF+ + +
Sbjct: 326 -LGYTGRSLAFLLKKFANVDAQKQYQTADWRVRPLPTELFDYARSDTHFLLYIFDNMRNE 384
Query: 216 VAQKGN 221
+ + N
Sbjct: 385 LIHRSN 390
>gi|212528170|ref|XP_002144242.1| exosome component 3'-5' exonuclease [Talaromyces marneffei ATCC
18224]
gi|210073640|gb|EEA27727.1| exosome complex exonuclease Rrp6, putative [Talaromyces marneffei
ATCC 18224]
Length = 795
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F P+ILK+ D+++L D+G L + +++ +H +
Sbjct: 293 LNEVFADPNILKVFHGSTMDIVWLQR-------DLG-------LYVVGLFD-TYHAAVAL 337
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
PK +SL + ++ K+ Q +DW RPLTEE YA D H L+ I++ + +
Sbjct: 338 GFPK--RSLKFLLEKYARYEADKKYQMADWRLRPLTEEMLRYARADTHYLLYIYDCLRNE 395
Query: 216 VAQKGN 221
+ +K
Sbjct: 396 LLEKST 401
>gi|393907978|gb|EJD74851.1| 3'-5' exonuclease [Loa loa]
Length = 728
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 157 LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L KE + L+ +CK +L L K QCS W RPL + Q YAA+DA+C++ ++
Sbjct: 641 LLKEIRGLSALCKRVLGKPLDKTEQCSVWDRRPLRDLQLRYAALDAYCMLMLY 693
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
VG+DAEW S ++ + ++LQLA +F++D+ I +
Sbjct: 439 VGVDAEW----SSYVSYSKATILQLAIPYH--------------IFIIDVDEIKSDILVV 480
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSST 122
++LFV +LK+G++F +DLI L S
Sbjct: 481 FFEKLFVEWKLLKIGYQFDEDLIQLRSA 508
>gi|407647033|ref|YP_006810792.1| ribonuclease D [Nocardia brasiliensis ATCC 700358]
gi|407309917|gb|AFU03818.1| ribonuclease D [Nocardia brasiliensis ATCC 700358]
Length = 417
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 146 NHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L +LG +L E LA + + LL +L K +DWS RPL +E NYAA+D
Sbjct: 118 QRLFDTELGGRLAGFERVGLAAMVENLLGHALRKGHGAADWSTRPLPDEWLNYAALDVEL 177
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELD 230
L+E+ + ++ +G S + E +
Sbjct: 178 LLELRDAVAAELDAQGKSDWAAQEFE 203
>gi|444314737|ref|XP_004178026.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
gi|387511065|emb|CCH58507.1| hypothetical protein TBLA_0A07170 [Tetrapisispora blattae CBS 6284]
Length = 771
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L E+F +P+I K+ D+I+L D+G L I S+++ H
Sbjct: 301 VLNEIFTNPNITKVFHGASMDIIWLQR-------DLG-------LYIVSLFDTFH---AS 343
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ L SLA + + SK+ Q +DW RPLT YA D H L+ IF+
Sbjct: 344 KALGLARHSLAYLLENYASFKTSKKYQLADWRRRPLTNNMLAYARSDTHFLLNIFD 399
>gi|156053686|ref|XP_001592769.1| hypothetical protein SS1G_05690 [Sclerotinia sclerotiorum 1980]
gi|154703471|gb|EDO03210.1| hypothetical protein SS1G_05690 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 603
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 49/226 (21%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGP 65
K +KIH S ++ E T L R L+G D EWK R + VSL+QLA +
Sbjct: 180 KKVKIHYCRSLQTTEET-LKRYFLGQKLIGFDIEWKADARVYDGAKKNVSLIQLATE--- 235
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
V L ++ P + +L +K++ P++ K+G D
Sbjct: 236 -----------ERVGLFHIALFPQDKVSQLVAPTMKKIMEDPEVTKVGVAISAD------ 278
Query: 122 TFCSQGCDIGFDRVEPYLDITSI----YNHLHH------KQLGRKLPKETKSLANICKEL 171
C+ R+ YLDI S+ +HL+ Q + K SLA ++
Sbjct: 279 --CT--------RLRKYLDIHSVSIFELSHLYRLVKYSASQEYGLINKRLVSLAKQVEDH 328
Query: 172 LDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L + L K ++ SDW+ R L+ +Q +YAA D++ ++NI + K
Sbjct: 329 LHLPLFKGGSVRSSDWT-RGLSIQQISYAASDSYAGYHLYNILESK 373
>gi|403218486|emb|CCK72976.1| hypothetical protein KNAG_0M01230 [Kazachstania naganishii CBS
8797]
Length = 738
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L +L ++F P + K+ D+I+L D+G L
Sbjct: 264 YLVD--TIALRDELHILNQVFTDPMVTKVFHGAFMDIIWLQR-------DLG-------L 307
Query: 140 DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
I S+++ H K LG PK SLA + + L + SK+ Q +DW RPL++ YA
Sbjct: 308 YIVSLFDTFHASKALG--FPKH--SLAYLLETLANFKTSKKYQLADWRIRPLSKPMSVYA 363
Query: 199 AIDAHCLIEIFN 210
D H L+ IF+
Sbjct: 364 RADTHFLLNIFD 375
>gi|317139033|ref|XP_003189119.1| 3-5 exonuclease [Aspergillus oryzae RIB40]
Length = 340
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 11 IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPR-VSLLQLACQPGPRFNP 69
+H + ES E +++ S ++GLD EWK S + VSL+QLA
Sbjct: 100 VHYCKTLESAET--ISKMFSDEPILGLDIEWKANASAADGILKNVSLIQLAS-------- 149
Query: 70 ESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFCS 125
S +F + + P +L LK + SPD++K G K D L
Sbjct: 150 ----SRRIALFHIAMFR-PARGAEDLVPPTLKRILESPDVIKAGVSIKADCTRLRKYLGI 204
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSK--ELQC 182
+ I +++ +Y + + Q L K T +L+ +E I L+K E++C
Sbjct: 205 ETRGI--------FELSHLYKLVKYSQSNPGLVNKRTVNLSAQVEEHFGIPLAKDVEVRC 256
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
SDW++ L Q +YAA D + +FN K
Sbjct: 257 SDWAS-ALDYSQVHYAAADPFACVCLFNTMNAK 288
>gi|444432003|ref|ZP_21227163.1| putative ribonuclease [Gordonia soli NBRC 108243]
gi|443887177|dbj|GAC68884.1| putative ribonuclease [Gordonia soli NBRC 108243]
Length = 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + E L + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 144 GRLLGLPKVNLAAMVAEFLGLGLAKGHGAADWSRRPLPDDWLNYAALDVEVLVELRDAID 203
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFK 255
+ G + E + IL++P +T R++
Sbjct: 204 AALVDAGKDDWARQE---------FRHILDRPPTPPRTDRWR 236
>gi|326795603|ref|YP_004313423.1| ribonuclease D [Marinomonas mediterranea MMB-1]
gi|326546367|gb|ADZ91587.1| ribonuclease D [Marinomonas mediterranea MMB-1]
Length = 383
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 21/131 (16%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W LK+L V+ D++K+ CS+ D+ FDR+ + + + Q
Sbjct: 70 WAPLKDLMVNLDVMKVFHA------------CSEDLDV-FDRL-----LGVLPTPFYDTQ 111
Query: 153 LGRKLP--KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+G + + S + + L I ++K+ SDW+ RPLTE QK YAA+D L +++
Sbjct: 112 IGEAYANGQWSVSYVKLIQAYLSIEVAKDETRSDWTVRPLTEAQKRYAALDVVYLAKVYP 171
Query: 211 IFQVKVAQKGN 221
Q+++ QK N
Sbjct: 172 Q-QIEMLQKKN 181
>gi|306822549|ref|ZP_07455927.1| ribonuclease D [Bifidobacterium dentium ATCC 27679]
gi|304554094|gb|EFM42003.1| ribonuclease D [Bifidobacterium dentium ATCC 27679]
Length = 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 138 YLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ D+ +HL ++ R L LA + + L ++L+KE +DWS RPL + +N
Sbjct: 109 FADLGMEPHHLFDTEIAARLLGMHRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRN 168
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGN 221
YAA+D LIE+ + ++ ++G
Sbjct: 169 YAALDVELLIELEQRMRTELKRQGK 193
>gi|171742685|ref|ZP_02918492.1| hypothetical protein BIFDEN_01799 [Bifidobacterium dentium ATCC
27678]
gi|283456244|ref|YP_003360808.1| ribonuclease D [Bifidobacterium dentium Bd1]
gi|171278299|gb|EDT45960.1| 3'-5' exonuclease [Bifidobacterium dentium ATCC 27678]
gi|283102878|gb|ADB09984.1| Ribonuclease D [Bifidobacterium dentium Bd1]
Length = 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 138 YLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ D+ +HL ++ R L LA + + L ++L+KE +DWS RPL + +N
Sbjct: 109 FADLGMEPHHLFDTEIAARLLGMHRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRN 168
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGN 221
YAA+D LIE+ + ++ ++G
Sbjct: 169 YAALDVELLIELEQRMRTELKRQGK 193
>gi|26452498|dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
Length = 578
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 17/123 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 325 LREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------GQASR 367
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + + ++ +KE Q +DW RPL EE YA D H L+ I+++ +++
Sbjct: 368 VLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIKLE 427
Query: 216 VAQ 218
+ +
Sbjct: 428 LQR 430
>gi|351715433|gb|EHB18352.1| Werner syndrome ATP-dependent helicase [Heterocephalus glaber]
Length = 1411
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS ++G D EW P ++ RV+L+QL ES + + +
Sbjct: 69 ISMSLSAGDVIGFDMEWPPIY-NKGKLSRVALVQLCV----------SESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + I K G + D L F DI +++ ++++T +
Sbjct: 118 SVFP-----QGLKMLLENETIKKAGVGIEGDQWKLLRDF-----DI---KLKSFVELTDV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL E SL + K L L K ++CS+WS PL+E+QK YAA D
Sbjct: 165 AN--------QKLKCMEIWSLNGLVKHLFGKQLLKDKSIRCSNWSIFPLSEDQKLYAATD 216
Query: 202 AHCLIEIF 209
A+ + I+
Sbjct: 217 AYAGLIIY 224
>gi|296394326|ref|YP_003659210.1| 3'-5' exonuclease [Segniliparus rotundus DSM 44985]
gi|296181473|gb|ADG98379.1| 3'-5' exonuclease [Segniliparus rotundus DSM 44985]
Length = 470
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA + + LL + L+K +DWS RPL E NYAA+D LI +
Sbjct: 145 GRIAGFERVGLAALVEALLGVGLAKGHGAADWSQRPLPPEWLNYAALDVELLIPMREALL 204
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + ++ E +
Sbjct: 205 AVLAEQGKTQWALEEFE 221
>gi|159037106|ref|YP_001536359.1| 3'-5' exonuclease [Salinispora arenicola CNS-205]
gi|157915941|gb|ABV97368.1| 3'-5' exonuclease [Salinispora arenicola CNS-205]
Length = 451
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + + LL SL K +DWS+RPL E YAA+D L+E+ + + ++ ++
Sbjct: 170 ERVGLAALTEHLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLVELRDALEAELTRQ 229
Query: 220 GN 221
G
Sbjct: 230 GK 231
>gi|309801464|ref|ZP_07695591.1| 3'-5' exonuclease [Bifidobacterium dentium JCVIHMP022]
gi|308221979|gb|EFO78264.1| 3'-5' exonuclease [Bifidobacterium dentium JCVIHMP022]
Length = 430
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 138 YLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
+ D+ +HL ++ R L LA + + L ++L+KE +DWS RPL + +N
Sbjct: 106 FADLGMEPHHLFDTEIAARLLGMHRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRN 165
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKG 220
YAA+D LIE+ + ++ ++G
Sbjct: 166 YAALDVELLIELEQRMRTELKRQG 189
>gi|367005124|ref|XP_003687294.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
gi|357525598|emb|CCE64860.1| hypothetical protein TPHA_0J00370 [Tetrapisispora phaffii CBS 4417]
Length = 743
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D +I L ++L +F P I K+ D+I+L D+G L
Sbjct: 260 YLVD--TIALRDKLQVLNVVFTDPKITKILHGAFMDIIWLQR-------DLG-------L 303
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I S+++ H R L SLA + + SK+ Q +DW RPL++ YA
Sbjct: 304 YIVSLFDTYH---ASRALGFPRHSLAYLLERFAHFKTSKQYQLADWRTRPLSKAMNAYAR 360
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
D H L+ IF+ + + Q+ S + E
Sbjct: 361 ADTHFLLNIFDQLRNMLIQEDKLASMLHE 389
>gi|241600516|ref|XP_002405158.1| exosome component, putative [Ixodes scapularis]
gi|215502468|gb|EEC11962.1| exosome component, putative [Ixodes scapularis]
Length = 518
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
LL E+F +P I+K+ D+++L F L + +++ Q
Sbjct: 74 HLLNEVFANPKIIKVLHGADMDVLWLQRDFG--------------LYLVGLFDT---GQA 116
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + + K+ Q +DW RPL E YA D H L+ ++++ +
Sbjct: 117 ARVLGMAHLSLAFLLRHYCHLDTDKKFQLADWRIRPLPLEMIKYAREDTHYLLHVYDLMR 176
Query: 214 VKVAQKGNSCSSI 226
+ KGN +++
Sbjct: 177 RDLLAKGNQLNNL 189
>gi|294955496|ref|XP_002788534.1| hypothetical protein Pmar_PMAR010065 [Perkinsus marinus ATCC 50983]
gi|239904075|gb|EER20330.1| hypothetical protein Pmar_PMAR010065 [Perkinsus marinus ATCC 50983]
Length = 663
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 53/190 (27%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
EF R +SQ +G+D EW S+ P +L Q+A + V+
Sbjct: 506 EFDDCVRDISQYRTIGIDVEW-------SSGPGAALFQVASE--------------DTVY 544
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILK--LGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
L+D+ +P I + LF + ++ LGF DL + D+ D+
Sbjct: 545 LIDML---VPEIRQS-STLFSTLRRVRRVLGFSISADLERIPQLKECGVIDVQVDKR--- 597
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
S+ H+ QLG L K QCS+W++RPL+E QKNYA
Sbjct: 598 ---GSLQRHVA-GQLGAYLDKTE-------------------QCSEWADRPLSESQKNYA 634
Query: 199 AIDAHCLIEI 208
A+DA+ L+ +
Sbjct: 635 ALDAYTLLAL 644
>gi|153005072|ref|YP_001379397.1| 3'-5' exonuclease [Anaeromyxobacter sp. Fw109-5]
gi|152028645|gb|ABS26413.1| 3'-5' exonuclease [Anaeromyxobacter sp. Fw109-5]
Length = 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L ++ L+ + + + LSK Q SDW RPLT Q YAA+D H L+ + ++
Sbjct: 112 ARRLGRQGLGLSALVEAHFGVRLSKTFQRSDWGQRPLTAAQLAYAALDTHYLLALRDMLA 171
Query: 214 VKVAQKGNSCSSISELD 230
++ G S + E +
Sbjct: 172 GELDTLGASEQARREFE 188
>gi|393910372|gb|EFO27811.2| 3'-5' exonuclease [Loa loa]
Length = 844
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD-----RVEPYLDI 141
PL + +L E F P+ILK+ D+++L F ++ FD RV Y
Sbjct: 318 FPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNM-FDTYKAMRVLNYSKF 376
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
+ Y HL + C LD K+ Q +DW RPLT K YA D
Sbjct: 377 S--YQHL---------------VQTCCNHTLD----KKFQKADWRLRPLTGAHKTYARSD 415
Query: 202 AHCLIEIFNIFQVKVAQKGNSCSSISE 228
H L+ ++ ++K+ +G++ ++ E
Sbjct: 416 THYLLHCYDQLRIKLLDQGDAAGNLLE 442
>gi|347827584|emb|CCD43281.1| hypothetical protein [Botryotinia fuckeliana]
Length = 823
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+I+K+ D+++L D+G L + +++ H+
Sbjct: 286 QVLNEVFADPNIIKVFHGAYMDIVWLQR-------DLG-------LYVVGLFD-THYA-- 328
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
R+L SLA + K+ +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 329 CRRLGFAGGSLAFLLKKYIDFDADKKYQLADWRIRPLPEEMFFYARADTHFLLYIFD 385
>gi|154301232|ref|XP_001551029.1| hypothetical protein BC1G_10286 [Botryotinia fuckeliana B05.10]
Length = 823
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+I+K+ D+++L D+G L + +++ H+
Sbjct: 286 QVLNEVFADPNIIKVFHGAYMDIVWLQR-------DLG-------LYVVGLFD-THYA-- 328
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
R+L SLA + K+ +D K+ Q +DW RPL EE YA D H L+ IF+
Sbjct: 329 CRRLGFAGGSLAFLLKKYIDFDADKKYQLADWRIRPLPEEMFFYARADTHFLLYIFD 385
>gi|311748079|ref|ZP_07721864.1| 3'- 5' exonuclease domain protein [Algoriphagus sp. PR1]
gi|126574723|gb|EAZ79104.1| 3'- 5' exonuclease domain protein [Algoriphagus sp. PR1]
Length = 201
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 39/187 (20%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
A LS+ S++G D E KP + +V+LLQL S A+ FL L+
Sbjct: 36 AEFLSKQSIIGFDTETKPA-FRRGVINQVALLQL--------------STATQAFLFRLN 80
Query: 86 SI-PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP--YLDIT 142
I P + L+ + I+K+G D+ +G D P + D+
Sbjct: 81 EIGEFP---DSLRNILEKESIVKVGAAVHDDI---------KGLAKLTDSFFPLSFFDLN 128
Query: 143 SIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+ +G + N+C +L + +SK Q S+W LTE+Q+ YAA DA
Sbjct: 129 DELKKVGFHNVGVR---------NLCAMVLKMRISKSEQVSNWEAEVLTEKQQRYAATDA 179
Query: 203 HCLIEIF 209
+E+F
Sbjct: 180 WACLEVF 186
>gi|82793580|ref|XP_728099.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484273|gb|EAA19664.1| Streptococcus pyogenes AMV256, putative [Plasmodium yoelii yoelii]
Length = 713
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 153 LGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
L +K+ K KSL ++C + L LSK+LQ S+W+ RPL++EQ YA +DA+ LI I
Sbjct: 620 LPKKINKHYFKSLNDLCFQFLRKKLSKKLQLSNWNKRPLSKEQIEYAGLDAYVLIPI 676
>gi|156844457|ref|XP_001645291.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156115951|gb|EDO17433.1| hypothetical protein Kpol_1037p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 746
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L +L E+F P+ILK+ D+I+L D+G L
Sbjct: 262 FLVD--TLALRDELHILNEVFADPNILKVLHGAFMDIIWLQR-------DLG-------L 305
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ S+++ H R L SLA + ++ + SK+ Q +DW RPL++ YA
Sbjct: 306 YVVSLFDTYH---ASRALGFPRHSLAYLLEKYANFKTSKKYQLADWRVRPLSKPMHAYAR 362
Query: 200 IDAHCLIEIFN 210
D H L+ I++
Sbjct: 363 ADTHFLLNIYD 373
>gi|312066427|ref|XP_003136265.1| 3'-5' exonuclease [Loa loa]
Length = 845
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD-----RVEPYLDI 141
PL + +L E F P+ILK+ D+++L F ++ FD RV Y
Sbjct: 318 FPLWNDMHILNEPFTDPNILKVFHGADSDIVWLQRDFGIYVVNM-FDTYKAMRVLNYSKF 376
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
+ Y HL + C LD K+ Q +DW RPLT K YA D
Sbjct: 377 S--YQHL---------------VQTCCNHTLD----KKFQKADWRLRPLTGAHKTYARSD 415
Query: 202 AHCLIEIFNIFQVKVAQKGNSCSSISE 228
H L+ ++ ++K+ +G++ ++ E
Sbjct: 416 THYLLHCYDQLRIKLLDQGDAAGNLLE 442
>gi|419849744|ref|ZP_14372771.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 35B]
gi|419851666|ref|ZP_14374588.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 2-2B]
gi|386411097|gb|EIJ25853.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 35B]
gi|386413096|gb|EIJ27721.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 2-2B]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|221503925|gb|EEE29602.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii VEG]
Length = 1048
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 74 SNASVVFLLDL---SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC-- 128
+ S VFL+DL + + ++ ++L+ LF +P I KL ++ D+ L + G
Sbjct: 830 ATESRVFLVDLVNDNPVYKATLLQMLRWLFANPFIAKLMYQASGDITKLFFALGAVGSPG 889
Query: 129 ------DIGFDR----VEPYLDITSIY-NHLHHK-------QLGRKLPKETKSLANICKE 170
D+ R E L I H K + R + + SL +C++
Sbjct: 890 ALVHCIDLRKGRHLANAERELREGVIAKEHFLEKNEEETPERYMRPVKRRFPSLQEMCRQ 949
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
+L L K Q S+W+ RPLT Q +YAA+DA+ LI + + + GN + E
Sbjct: 950 VLHADLDKSEQRSNWNMRPLTASQAHYAALDAYVLILLEAALRRQGWIPGNILGGLGEFS 1009
Query: 231 S 231
+
Sbjct: 1010 A 1010
>gi|405979861|ref|ZP_11038202.1| hypothetical protein HMPREF9241_00925 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391236|gb|EJZ86300.1| hypothetical protein HMPREF9241_00925 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 413
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG-- 220
LA +C+++L + L K+ Q S+WS RPL+++ YAA+D L E++ +++ G
Sbjct: 139 GLAAVCEQVLGLGLVKDHQASNWSVRPLSKDWLRYAALDVELLTELYRRLSIQLNDAGRW 198
Query: 221 ----NSCSSISELD 230
C ++ LD
Sbjct: 199 EWMEEECDYLAHLD 212
>gi|331696705|ref|YP_004332944.1| 3'-5' exonuclease [Pseudonocardia dioxanivorans CB1190]
gi|326951394|gb|AEA25091.1| 3'-5' exonuclease [Pseudonocardia dioxanivorans CB1190]
Length = 394
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
L + ++LL ++L K +DWS RPL E+ YAA+D LIE+ ++ +A++G S
Sbjct: 124 GLGPMVEQLLGLALEKGHGAADWSRRPLPEDWLVYAALDVEVLIELRDLLAGMLAEQGKS 183
Query: 223 CSSISELDS 231
+ E ++
Sbjct: 184 EFAAQEFEA 192
>gi|84496254|ref|ZP_00995108.1| putative ribonuclease D [Janibacter sp. HTCC2649]
gi|84383022|gb|EAP98903.1| putative ribonuclease D [Janibacter sp. HTCC2649]
Length = 428
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 147 HLHHKQLGRKL---PKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
L +LG +L P+ LA + + L ++L+KE DWS RPL E YAA+D
Sbjct: 140 QLFDTELGARLLGLPR--VGLAAVVEHYLGLALAKEHSAVDWSTRPLPEPWLRYAALDVE 197
Query: 204 CLIEIFNIFQVKVAQKGNSCSSISELDS 231
L E+ N+ V +A++ S + E ++
Sbjct: 198 VLTELRNLMGVDLARQDKSEWARQEFEA 225
>gi|340725346|ref|XP_003401032.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus terrestris]
Length = 613
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 40/190 (21%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+ ++G D EW +N VSLLQLA FN V L + I
Sbjct: 83 NDVLGFDCEW-------ANEGPVSLLQLA-----TFN--------GVCGLFRIGKIGY-- 120
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I + LK+L + DILK+G +D + + + GC RV +D+ ++ +
Sbjct: 121 IPQKLKDLLANKDILKVGVASYEDGQKILADY---GC-----RVSSTIDLRTLAARV--- 169
Query: 152 QLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
KLP +SLA + + L + + K E++CS+W LT+EQ YAA DA + I+
Sbjct: 170 ----KLP-SPQSLAAMSLQYLGLEMDKLIEIRCSNWDAGTLTDEQVAYAACDAIASVLIY 224
Query: 210 NIFQVKVAQK 219
+ K+ +K
Sbjct: 225 DQITQKMKEK 234
>gi|328767973|gb|EGF78021.1| hypothetical protein BATDEDRAFT_27210 [Batrachochytrium
dendrobatidis JAM81]
Length = 826
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L + L F +P I+K+ + D+ +L F D+ FD
Sbjct: 298 FLVD--TLILRNSLHALNTSFANPQIVKVFHGAEMDIQWLQRDFGVYVVDL-FD------ 348
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
Y+ H +L E SLA + K D+ K Q +DW RPL +E +YA
Sbjct: 349 ----TYHASHALEL------EGHSLAFLLKYYCDVVTDKRYQLADWRIRPLPKEMVHYAR 398
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
+D H L+ IF+ + ++ K N
Sbjct: 399 MDTHYLLYIFDRMRNELLNKSN 420
>gi|213692580|ref|YP_002323166.1| 3'-5' exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|384199780|ref|YP_005585523.1| putative exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213524041|gb|ACJ52788.1| 3'-5' exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|320458732|dbj|BAJ69353.1| putative exonuclease [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETLMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|46190415|ref|ZP_00206459.1| COG0349: Ribonuclease D [Bifidobacterium longum DJO10A]
gi|189439553|ref|YP_001954634.1| ribonuclease D [Bifidobacterium longum DJO10A]
gi|189427988|gb|ACD98136.1| Ribonuclease D [Bifidobacterium longum DJO10A]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|23465521|ref|NP_696124.1| hypothetical protein BL0948 [Bifidobacterium longum NCC2705]
gi|23326181|gb|AAN24760.1| narrowly conserved hypothetical protein [Bifidobacterium longum
NCC2705]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|296453936|ref|YP_003661079.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum JDM301]
gi|296183367|gb|ADH00249.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum JDM301]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETLMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|227546007|ref|ZP_03976056.1| ribonuclease D [Bifidobacterium longum subsp. longum ATCC 55813]
gi|239621937|ref|ZP_04664968.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322688886|ref|YP_004208620.1| exonuclease [Bifidobacterium longum subsp. infantis 157F]
gi|322690861|ref|YP_004220431.1| exonuclease [Bifidobacterium longum subsp. longum JCM 1217]
gi|384201762|ref|YP_005587509.1| exonuclease [Bifidobacterium longum subsp. longum KACC 91563]
gi|227213641|gb|EEI81490.1| ribonuclease D [Bifidobacterium longum subsp. infantis ATCC 55813]
gi|239515128|gb|EEQ54995.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|320455717|dbj|BAJ66339.1| putative exonuclease [Bifidobacterium longum subsp. longum JCM
1217]
gi|320460222|dbj|BAJ70842.1| putative exonuclease [Bifidobacterium longum subsp. infantis 157F]
gi|338754769|gb|AEI97758.1| exonuclease [Bifidobacterium longum subsp. longum KACC 91563]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|164656377|ref|XP_001729316.1| hypothetical protein MGL_3351 [Malassezia globosa CBS 7966]
gi|159103207|gb|EDP42102.1| hypothetical protein MGL_3351 [Malassezia globosa CBS 7966]
Length = 348
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 87/210 (41%), Gaps = 46/210 (21%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFP----RVSLLQLACQPGP 65
K HLV P H + +VGLD EW NF + ++ QLA
Sbjct: 107 KSHLVDKLLPPALAHTN---TLGGIVGLDLEW--------NFGLRMGKTAVAQLA----- 150
Query: 66 RFNPESDESNASVVFLLDLSSIP-LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFC 124
A+ +F++ LS + LP + L + P ILK G +QDL L F
Sbjct: 151 ---------TANDIFVIHLSQMKRLP---DTLVAMLQDPHILKSGVAVRQDLSKLQRDFG 198
Query: 125 SQGCD-IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE-LQC 182
+ C + R+ LD +N GR+ SL ++C L L+K +
Sbjct: 199 IETCGALELSRIAWKLD-PERWN-------GRR---ALISLRDLCAAYLGCDLAKGPTRT 247
Query: 183 SDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
S W+ PLT EQ YAA DA+ +E+ +
Sbjct: 248 SSWTQVPLTNEQITYAASDAYVSLELAHAM 277
>gi|393774580|ref|ZP_10362942.1| ribonuclease D [Novosphingobium sp. Rr 2-17]
gi|392720063|gb|EIZ77566.1| ribonuclease D [Novosphingobium sp. Rr 2-17]
Length = 405
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 9 LKIH-LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
+KIH L+T+T+ E T L L++S + +D E+ + ++ +P + L+Q+A
Sbjct: 1 MKIHPLITTTD--ELTALCERLAKSDFIAVDTEFMRENTY---WPELCLVQIA------- 48
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
+ E A++ L + I L ++ELL + D+LK+ QD + + F +
Sbjct: 49 ---NTEEAAAIDPLAE--GIDLTPMFELLTN---NEDVLKVFHAGGQD-VEIIFNFTGRT 99
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
FD + ++ +Q+G +N+ + L +++ K + +DWS
Sbjct: 100 PHPIFDTQIAMMAVS------QSEQIG---------YSNLVEAWLGLTIDKGARFTDWSR 144
Query: 188 RPLTEEQKNYAAIDAHCLIEIF 209
RPLTE Q YA D L +IF
Sbjct: 145 RPLTERQIEYAIGDVTHLSKIF 166
>gi|356514082|ref|XP_003525736.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 506
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
SI L+E+F P K+ D+++L F C++ FD
Sbjct: 140 SIGPYLREVFKDPSKRKVMHGADNDVVWLQRDFGIYICNL-FDT---------------- 182
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
Q + L E KSL + DI+ +KE Q +DW RPL E YA D H L+ I++
Sbjct: 183 HQASKVLKLERKSLEYLLCHFCDITANKEYQSADWRLRPLPYEMLRYAREDTHYLLYIYD 242
Query: 211 IFQVKV 216
++++
Sbjct: 243 FMRIEL 248
>gi|225849884|ref|YP_002730118.1| DNA polymerase I [Persephonella marina EX-H1]
gi|225644858|gb|ACO03044.1| DNA polymerase I [Persephonella marina EX-H1]
Length = 584
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 75 NASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDR 134
N S +F+ D+ IP S E LKEL + ++ KF D+ +L + F
Sbjct: 53 NYSKIFVYDMFRIPQFS--EHLKELLENKGVIGHNLKF--DIKFLKTNFG---------- 98
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
+ P + +++ + QL + +E SL+ + L D L K Q S W + LTEEQ
Sbjct: 99 IFPQI----VFDTMIASQLLSEDSREKHSLSALSYRLTDNHLDKSQQRSPWGIKNLTEEQ 154
Query: 195 KNYAAIDAHCLIEIFNIFQ 213
YAA D L EIF + +
Sbjct: 155 LRYAAKDVQVLREIFPVLR 173
>gi|441521327|ref|ZP_21002988.1| ribonuclease D [Gordonia sihwensis NBRC 108236]
gi|441459159|dbj|GAC60949.1| ribonuclease D [Gordonia sihwensis NBRC 108236]
Length = 425
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + E L + L+K +DWS RPL + NYAA+D LIE+ N
Sbjct: 144 GRLLDFPKVNLAAMVAEFLHLGLAKGHGAADWSRRPLPADWLNYAALDVEVLIELRNAVA 203
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIR 264
+ ++G + E +L +P +T R++ + +R
Sbjct: 204 GALDERGRGEWAAQEFAH---------VLRRPPAPPRTDRWRRTSNIHNLR 245
>gi|381397371|ref|ZP_09922783.1| 3'-5' exonuclease [Microbacterium laevaniformans OR221]
gi|380775356|gb|EIC08648.1| 3'-5' exonuclease [Microbacterium laevaniformans OR221]
Length = 398
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E L + ++ L I+L+K +DWS RPL + YAA+D L+++F + +
Sbjct: 107 ARLLGHERVGLGAVVEDTLGITLAKAHSAADWSTRPLPQPWLEYAALDVLHLVDVFEVLR 166
Query: 214 VKVAQKGNSCSSISELDS 231
++ ++G + + E ++
Sbjct: 167 DELEEQGKTDIAAQEFET 184
>gi|347760629|ref|YP_004868190.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
gi|347579599|dbj|BAK83820.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
Length = 395
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
V T + E + L V +D E+ +R++ +P + L+QLA +
Sbjct: 13 VLITTTAELEAVTTRLRGEPFVTIDTEFVRERTY---WPELCLVQLAGK----------- 58
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGF 132
+ VV I L S+ ELL + ++K+ +QDL I+L F
Sbjct: 59 -DDVVVIDTTAPGIDLSSLGELLDD----AGVVKVFHAARQDLEIFLHL----------F 103
Query: 133 DRVEPYLDITSIYNHL--HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
DR+ L T + + H Q+G N+ LL + + K + SDWS RPL
Sbjct: 104 DRLPAALFDTQVAAMVAGHGDQVGYD---------NLVWSLLGVQIDKSHRFSDWSARPL 154
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSN 233
+ Q YAA D L +++ ++ Q+G +ELD N
Sbjct: 155 SPAQIGYAAADVTYLRLVYDKLLTQLQQEGRLEWVAAELDVLN 197
>gi|317482293|ref|ZP_07941314.1| 3'-5' exonuclease [Bifidobacterium sp. 12_1_47BFAA]
gi|316916309|gb|EFV37710.1| 3'-5' exonuclease [Bifidobacterium sp. 12_1_47BFAA]
Length = 433
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|255085362|ref|XP_002505112.1| predicted protein [Micromonas sp. RCC299]
gi|226520381|gb|ACO66370.1| predicted protein [Micromonas sp. RCC299]
Length = 514
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 80/197 (40%), Gaps = 48/197 (24%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS-- 91
LVGLD E +P R P V+L+Q+ P++ + V+ S P P+
Sbjct: 107 LVGLDVEARPSRVKGVTHP-VALVQVT-------TPDNRGCLLAHVYGAMGLSPPTPNRP 158
Query: 92 ---------IWELLKELFVSPDILKLGFKFKQDLIYLSSTF------------CSQGCDI 130
LL L P++L +G +DL ++ F GC
Sbjct: 159 YVPGSAVTKFPPLLARLLHDPNVLPVGQGVAEDLRQIARCFPEVTNPGVPKGGAEPGCRR 218
Query: 131 GFDRVEPYLDITSI--YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
G ++D+ SI + + LGR LA C D+S K +Q SDWS
Sbjct: 219 GA-----FVDLASIVDFYDVPASGLGR--------LAQHCG-FSDVSKPKSVQVSDWSRT 264
Query: 189 PLTEEQKNYAAIDAHCL 205
PLT+ Q YAA DA CL
Sbjct: 265 PLTDAQVRYAAQDA-CL 280
>gi|331005546|ref|ZP_08328920.1| Ribonuclease D [gamma proteobacterium IMCC1989]
gi|330420648|gb|EGG94940.1| Ribonuclease D [gamma proteobacterium IMCC1989]
Length = 383
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 40/200 (20%)
Query: 22 FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFL 81
L ++LS S + LD E+ R++ +P + LLQ+A + G V+L
Sbjct: 27 LADLCQSLSTQSAIALDTEFVRTRTY---YPHIGLLQIADENG--------------VYL 69
Query: 82 LDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+D +I S + + ++ +P I+K+ +DL F V P
Sbjct: 70 IDPLAI---SDTQPMADVLQNPAIVKVVHACSEDLEVFQYAFG----------VLP---- 112
Query: 142 TSIYNHLHHKQLGRKLPKETKSL--ANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
L Q+ S+ AN+ +E+ I + K+ SDW RPL++ Q YAA
Sbjct: 113 ----ESLFDTQVAAGFAGYGSSIGYANLLREIKRIDIPKQETRSDWLQRPLSDAQLRYAA 168
Query: 200 IDAHCLIEIFNIFQVKVAQK 219
+D L+EI+ K+ Q+
Sbjct: 169 LDVEYLLEIYRGLVEKLQQQ 188
>gi|68074623|ref|XP_679228.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499925|emb|CAH95040.1| conserved hypothetical protein [Plasmodium berghei]
Length = 661
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 153 LGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
L +K+ K KSL ++C + L LSK+LQ S+W+ RPL++EQ YA +DA+ LI I
Sbjct: 568 LPKKINKHYFKSLNDLCFQFLRKKLSKKLQLSNWNKRPLSKEQIEYAGLDAYVLIPI 624
>gi|50552133|ref|XP_503541.1| YALI0E04444p [Yarrowia lipolytica]
gi|49649410|emb|CAG79122.1| YALI0E04444p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ- 152
E+ E+ P I+K+ D+ +L F L I S+++ H Q
Sbjct: 282 EIFNEVLTDPKIVKVLHGATMDIQWLQRDFG--------------LYIVSLFDTFHAAQA 327
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG K SLA + + + SK+ Q SDW RP++ EQ YA D H L+ I++
Sbjct: 328 LGLK----GHSLAFLLQHYANFVTSKKYQLSDWRIRPMSPEQLLYARADTHFLLNIYDQL 383
Query: 213 QVKVAQK 219
+ + QK
Sbjct: 384 KNALVQK 390
>gi|292617367|ref|XP_697980.4| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Danio
rerio]
Length = 1361
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 34/207 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L ALS S VG D EW P + + +V+++QL + E + + +
Sbjct: 57 LRSALSSGSAVGFDLEWPPSFT-KGKTKKVAMVQLC----------ASEDKCYLFHISSM 105
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P P LK +I+K+G + D L S + DI + +D++ +
Sbjct: 106 SGFP-PG----LKMFLEDENIMKVGVGIEGDKWKLLSDY-----DIKLKNI---VDLSDL 152
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDA 202
N + E SL + K LL L K+ ++CS W + LTE+QK YAA DA
Sbjct: 153 ANE-------KLRCCEKWSLDGLVKHLLKKQLFKDKLVRCSHWDDFSLTEDQKRYAATDA 205
Query: 203 HCLIEIFNIFQVKVAQ-KGNSCSSISE 228
+ + I+ Q ++ G+S S+ E
Sbjct: 206 YAGLLIYQKLQEMISGCSGSSALSLKE 232
>gi|152965548|ref|YP_001361332.1| 3'-5' exonuclease [Kineococcus radiotolerans SRS30216]
gi|151360065|gb|ABS03068.1| 3'-5' exonuclease [Kineococcus radiotolerans SRS30216]
Length = 427
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 146 NHLHHKQLGRKLPKETK-SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L +LG ++ + L + +ELL + L+KE DWS RPL E YAA+D
Sbjct: 123 TRLFDTELGSRIAGLPRVGLGAVVEELLGLRLAKEHSAVDWSTRPLPEPWLTYAALDVEV 182
Query: 205 LIEIFNIFQVKVAQKGNSCSSISEL 229
L+++ + ++A +G ++ E
Sbjct: 183 LVQVRDALAERLAAQGKLEWALEEF 207
>gi|289549017|ref|YP_003474005.1| DNA-directed DNA polymerase [Thermocrinis albus DSM 14484]
gi|289182634|gb|ADC89878.1| DNA-directed DNA polymerase [Thermocrinis albus DSM 14484]
Length = 575
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+FLLDL + + LKEL ++ KF DL YL +EPY
Sbjct: 47 IFLLDLFELGERGVL-FLKELLSQKGVVGHNLKF--DLKYLYRY-----------HIEPY 92
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
++++ + QL +L + SL ++ L L K LQ SDW +R LT+ Q YA
Sbjct: 93 ----AVFDTMVASQLLAELDRH--SLQSVAMHYLGQVLDKSLQLSDWGSRVLTKAQLEYA 146
Query: 199 AIDAHCLIEIFNIFQVKVAQ 218
A+D + ++F I K+ Q
Sbjct: 147 ALDVVVVRDLFPILLEKLNQ 166
>gi|294056543|ref|YP_003550201.1| 3'-5' exonuclease [Coraliomargarita akajimensis DSM 45221]
gi|293615876|gb|ADE56031.1| 3'-5' exonuclease [Coraliomargarita akajimensis DSM 45221]
Length = 211
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 41/202 (20%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+I L+ + E E + L +SS +G D E +P +P +L+QLA
Sbjct: 33 RIELLNTIE--EMEAVVPQLLKSSHLGFDTETRPTFKKGEYYP-PALIQLAT-------- 81
Query: 70 ESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST--FCSQG 127
A V+L +S + LK + SP ILK G K+D+ L + F G
Sbjct: 82 ------ADCVYLFRISK---SETLQPLKAILESPQILKTGIGIKEDVRELRAMEDFQPSG 132
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
+L+IT +L KL E + L + LL+ +SK Q S+W+
Sbjct: 133 ----------FLEIT---------ELTLKLGYENRGLRPLTGLLLNGRISKAAQVSNWAR 173
Query: 188 RPLTEEQKNYAAIDAHCLIEIF 209
+ L ++Q YAA DA E++
Sbjct: 174 QELDQKQIRYAATDAWVSRELY 195
>gi|415712092|ref|ZP_11464588.1| ribonuclease D [Gardnerella vaginalis 55152]
gi|415715721|ref|ZP_11466144.1| ribonuclease D [Gardnerella vaginalis 1400E]
gi|388057319|gb|EIK80151.1| ribonuclease D [Gardnerella vaginalis 55152]
gi|388058168|gb|EIK80966.1| ribonuclease D [Gardnerella vaginalis 1400E]
Length = 451
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRAELKKQG 189
>gi|419847060|ref|ZP_14370262.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 1-6B]
gi|419854794|ref|ZP_14377570.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 44B]
gi|386412369|gb|EIJ27041.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 1-6B]
gi|386417071|gb|EIJ31562.1| 3'-5' exonuclease [Bifidobacterium longum subsp. longum 44B]
Length = 433
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 136 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 195
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 196 EWAAEEF-SHALVAGL 210
>gi|294055851|ref|YP_003549509.1| Ribonuclease D [Coraliomargarita akajimensis DSM 45221]
gi|293615184|gb|ADE55339.1| Ribonuclease D [Coraliomargarita akajimensis DSM 45221]
Length = 386
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 37/191 (19%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
++T+TE+ R + VG+D E+ R++ +P + ++QL G
Sbjct: 1 MITTTEA--LREAVRRAQDAGAVGVDTEFVWDRTY---YPTLGVVQLGYPDGH------- 48
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
+L P W L EL P+++K+ +QDL L C F
Sbjct: 49 ---------CELIDAPEIEDWSPLAELMSDPNVVKILHDAQQDLTILRRV-CGSDPKTIF 98
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
D +T+ + L T SL +I K LL + L+K SDW RPLTE
Sbjct: 99 D-----TQLTAGFIGLSS----------TISLRDILKTLLKVRLAKTETQSDWVARPLTE 143
Query: 193 EQKNYAAIDAH 203
Q YA D
Sbjct: 144 AQIKYAEDDVR 154
>gi|237844623|ref|XP_002371609.1| 3'-5' exonuclease domain-containing protein [Toxoplasma gondii ME49]
gi|211969273|gb|EEB04469.1| 3'-5' exonuclease domain-containing protein [Toxoplasma gondii ME49]
Length = 1045
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 77 SVVFLLDL---SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC----- 128
S VFL+DL + + ++ ++L+ LF +P I KL ++ D+ L + G
Sbjct: 830 SRVFLVDLVNDNPVYKATLLQMLRWLFANPFIAKLMYQASGDITKLFFALGAVGSPGALV 889
Query: 129 ---DIGFDR----VEPYLDITSIY-NHLHHK-------QLGRKLPKETKSLANICKELLD 173
D+ R E L I H K + R + + SL +C+++L
Sbjct: 890 HCIDLRKGRHLANAERELREGVIAKEHFLEKNEEETPERYMRPVKRRFPSLQEMCRQVLH 949
Query: 174 ISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
L K Q S+W+ RPLT Q +YAA+DA+ LI + + + GN + E +
Sbjct: 950 ADLDKSEQRSNWNMRPLTASQAHYAALDAYVLILLEAALRRQGWIPGNILGGLGEFSA 1007
>gi|425734728|ref|ZP_18853045.1| 3'-5' exonuclease family protein [Brevibacterium casei S18]
gi|425480664|gb|EKU47828.1| 3'-5' exonuclease family protein [Brevibacterium casei S18]
Length = 390
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E LA + + L + L+KE DWS RPL EE NYAA+D L+ I +
Sbjct: 119 ARLLGWEKFGLAAVAERTLGVRLAKEHSAVDWSTRPLPEEWLNYAALDVEVLLPIRDALA 178
Query: 214 VKVAQKGN 221
++ G
Sbjct: 179 AELVAAGK 186
>gi|356565747|ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 889
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I L+E+F P K+ +D+ +L F C++ FD
Sbjct: 317 IGPYLREIFKDPAKRKVMHGADRDIAWLQRDFGIYICNL-FDT----------------H 359
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L E SL +I +++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 360 QASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLYIYDL 419
Query: 212 FQVKV 216
++K+
Sbjct: 420 MRIKL 424
>gi|291517068|emb|CBK70684.1| Ribonuclease D [Bifidobacterium longum subsp. longum F8]
Length = 398
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 101 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 160
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 161 EWAAEEF-SHALVAGL 175
>gi|356514039|ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
Length = 877
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I L+E+F P K+ +D+++L F C++ FD
Sbjct: 313 IGPYLREIFKDPAKRKVMHGADRDIVWLQRDFGIYICNL-FDT----------------H 355
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L E SL +I +++ +KE Q +DW RPL E YA D H L+ I+++
Sbjct: 356 QASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPNEMLRYAREDTHYLLYIYDL 415
Query: 212 FQVKV 216
++++
Sbjct: 416 MRIRL 420
>gi|334188034|ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
gi|160892401|gb|ABX52080.1| RRP6-like protein 2 [Arabidopsis thaliana]
gi|332006642|gb|AED94025.1| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
Length = 870
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 17/125 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I L+E+F P K+ +D+I+L F C++ FD
Sbjct: 321 IGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------G 363
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L E SL + + ++ +KE Q +DW RPL EE YA D H L+ I+++
Sbjct: 364 QASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDL 423
Query: 212 FQVKV 216
++++
Sbjct: 424 IKLEL 428
>gi|221482990|gb|EEE21314.1| 3'-5' exonuclease domain-containing protein, putative [Toxoplasma
gondii GT1]
Length = 1048
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 74 SNASVVFLLDL---SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC-- 128
+ S VFL+DL + + ++ ++L+ LF +P I KL ++ D+ L + G
Sbjct: 830 ATESRVFLVDLVNDNPVYKATLLQMLRWLFANPFIAKLMYQASGDITKLFFALGAVGSPG 889
Query: 129 ------DI---------------GFDRVEPYLDITSIYN-HLHHKQLGRKLPKETKSLAN 166
D+ G E +L+ + + + R+ P SL
Sbjct: 890 ALVHCIDLRKGRHLANSERELREGVIAKEHFLEKNEEETPERYMRPVKRRFP----SLQE 945
Query: 167 ICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
+C+++L L K Q S+W+ RPLT Q +YAA+DA+ LI + + + GN +
Sbjct: 946 MCRQVLHADLDKSEQRSNWNMRPLTASQAHYAALDAYVLILLEAALRRQGWIPGNILGGL 1005
Query: 227 SELDS 231
E +
Sbjct: 1006 GEFSA 1010
>gi|401837803|gb|EJT41675.1| RRP6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 734
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +S + +D E RS+ + V L+Q++ + E D +L+D +I
Sbjct: 229 LKNASEIAVDLEHHDYRSY---YGIVCLMQVSTR-------ERD-------YLVD--TIE 269
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
L +L E+F P I+K+ D+I+L D+G L + +++
Sbjct: 270 LRDALHILNEVFTDPLIVKVFHGAFMDIIWLQR-------DLG-------LYVVGLFDTY 315
Query: 149 H-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
H K +G LP+ SLA + + + SK+ Q +DW RPL++ YA D H L+
Sbjct: 316 HASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRARPLSKPMTAYARADTHFLLN 371
Query: 208 IFNIFQVKVAQ 218
I++ + K+ +
Sbjct: 372 IYDQLRNKLIE 382
>gi|308177768|ref|YP_003917174.1| ribonuclease D [Arthrobacter arilaitensis Re117]
gi|307745231|emb|CBT76203.1| putative ribonuclease D [Arthrobacter arilaitensis Re117]
Length = 416
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SL + ELL + L+KE DWS RPL E NYAA+D L E+ + ++G
Sbjct: 146 SLGTMVGELLGLQLAKEHSAVDWSTRPLPESWLNYAALDVEVLEELRQAITATLEEQGKL 205
Query: 223 CSSISELD 230
+I E +
Sbjct: 206 EFAIQEFE 213
>gi|392545413|ref|ZP_10292550.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
rubra ATCC 29570]
Length = 377
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
AN+ K +LD+ L K + +DW RPL Q YAA D L+ + K+A+KG S
Sbjct: 118 FANMVKMMLDVELDKSMSRTDWLKRPLQASQLEYAAADVFYLLPCYESLSKKIAEKGLSD 177
Query: 224 SSISE 228
ISE
Sbjct: 178 IVISE 182
>gi|154494239|ref|ZP_02033559.1| hypothetical protein PARMER_03589 [Parabacteroides merdae ATCC
43184]
gi|423724766|ref|ZP_17698908.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
gi|154086101|gb|EDN85146.1| 3'-5' exonuclease [Parabacteroides merdae ATCC 43184]
gi|409236726|gb|EKN29532.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
Length = 193
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ VG D E +P + ++SL+Q++ +DE+ FL L+ I
Sbjct: 42 LSEFQSVGFDTETRPSFKKGQRY-KISLMQIS----------TDEA----CFLFRLNRIG 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+P E L+E + +LK+G + D F + DI N L
Sbjct: 87 IP---EALEEFLANEKVLKIGLSLRDD----------------FGAMRKRTDIQPA-NFL 126
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + E SL I L + +SK + S+W L++ QK YAA+DA ++I
Sbjct: 127 DLQNYVGQFGIEDASLQKIYAILFNKKISKGQRLSNWEADVLSDAQKKYAALDAWACLKI 186
Query: 209 FN 210
+N
Sbjct: 187 YN 188
>gi|253698875|ref|YP_003020064.1| 3'-5' exonuclease [Geobacter sp. M21]
gi|251773725|gb|ACT16306.1| 3'-5' exonuclease [Geobacter sp. M21]
Length = 377
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 41/214 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P HLVT ++ L LS+ S++ D E + +V L+Q+
Sbjct: 10 PAAAHLVTDQKT--LDELVERLSRESVLAFDLEADSLHHYTE---KVCLIQV-------- 56
Query: 68 NPESDESNASVVFLLDLSSIPLPSI-WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ 126
S+AS L+D PL I ++L +F +P I K+ D+ L F
Sbjct: 57 ------SSASEDRLID----PLAPIDVKVLAPIFANPAIKKIFHGADYDMRSLYRDFG-- 104
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
+++ ++++ + Q L + LA + K+ + L K Q +DWS
Sbjct: 105 ------------IEVVNLFDTMIASQF---LGESEFGLAALLKKRFGVELDKRYQKADWS 149
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
RP ++E +YA D LIE++ + ++ QKG
Sbjct: 150 KRPFSQEMLDYAMKDTSLLIELYRQLEAELKQKG 183
>gi|10176710|dbj|BAB09932.1| nucleolar protein-like [Arabidopsis thaliana]
Length = 834
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD Q R
Sbjct: 288 LREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNL-FDT----------------GQASR 330
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + + ++ +KE Q +DW RPL EE YA D H L+ I+++ +++
Sbjct: 331 VLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDLIKLE 390
Query: 216 V 216
+
Sbjct: 391 L 391
>gi|440741870|ref|ZP_20921202.1| ribonuclease D [Pseudomonas syringae BRIP39023]
gi|440378394|gb|ELQ15016.1| ribonuclease D [Pseudomonas syringae BRIP39023]
Length = 377
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W LL L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRLLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|432098121|gb|ELK28008.1| Exosome component 10 [Myotis davidii]
Length = 876
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 327 FIVD--TLELRSDLYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 369
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 370 --LYVVNMFDTHQAARLLNLGRHSLDHLLKHYCNVESNKQYQLADWRIRPLPEEMLNYAR 427
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 428 DDTHYLLYIYDKMRLELWERGN 449
>gi|365758455|gb|EHN00296.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 734
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 38/191 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +S + +D E RS+ + V L+Q++ + E D +L+D +I
Sbjct: 229 LKNASEIAVDLEHHDYRSY---YGIVCLMQVSTR-------ERD-------YLVD--TIE 269
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
L +L E+F P I+K+ D+I+L D+G L + +++
Sbjct: 270 LRDALHILNEVFTDPLIVKVFHGAFMDIIWLQR-------DLG-------LYVVGLFDTY 315
Query: 149 H-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
H K +G LP+ SLA + + + SK+ Q +DW RPL++ YA D H L+
Sbjct: 316 HASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRARPLSKPMTAYARADTHFLLN 371
Query: 208 IFNIFQVKVAQ 218
I++ + K+ +
Sbjct: 372 IYDQLRNKLIE 382
>gi|312132962|ref|YP_004000301.1| rnd [Bifidobacterium longum subsp. longum BBMN68]
gi|311773944|gb|ADQ03432.1| Rnd [Bifidobacterium longum subsp. longum BBMN68]
Length = 408
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+ + + + G
Sbjct: 111 GLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKD 170
Query: 223 CSSISELDSSNLDLGL 238
+ E S L GL
Sbjct: 171 EWAAEEF-SHALVAGL 185
>gi|256375684|ref|YP_003099344.1| 3'-5' exonuclease [Actinosynnema mirum DSM 43827]
gi|255919987|gb|ACU35498.1| 3'-5' exonuclease [Actinosynnema mirum DSM 43827]
Length = 414
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +L + + LL L K +DWS RPL + NYAA+D L+++ ++ +
Sbjct: 131 GRLAGFERVALGTLVELLLGYRLEKGHGAADWSRRPLPADWLNYAALDVELLVQLRDVLE 190
Query: 214 VKVAQKGNSCSSISELDSSN 233
++ Q+G ++ E D++
Sbjct: 191 EELRQQGKLEWALEEFDAAR 210
>gi|256825389|ref|YP_003149349.1| ribonuclease D [Kytococcus sedentarius DSM 20547]
gi|256688782|gb|ACV06584.1| ribonuclease D [Kytococcus sedentarius DSM 20547]
Length = 431
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + LD++L+KE DWS RPL + YAA+D L+E+ + + + + G
Sbjct: 125 GLAAVVEHYLDLTLAKEHSAVDWSTRPLPTDWLVYAALDVEVLVEVRDAMEADLERLGRD 184
Query: 223 CSSISELDS 231
+ E D+
Sbjct: 185 EWARQEFDA 193
>gi|117928598|ref|YP_873149.1| 3'-5' exonuclease [Acidothermus cellulolyticus 11B]
gi|117649061|gb|ABK53163.1| 3'-5' exonuclease [Acidothermus cellulolyticus 11B]
Length = 416
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + +ELL L+K+ DWS RPL E YAA+D L+E+ I ++ ++G
Sbjct: 134 LAAMVEELLGFRLNKDHARVDWSRRPLPESWLRYAALDVEVLVELREILHTELQRQGKLR 193
Query: 224 SSISELD 230
++ E +
Sbjct: 194 WAVEEFE 200
>gi|433603682|ref|YP_007036051.1| 3'-5' exonuclease [Saccharothrix espanaensis DSM 44229]
gi|407881535|emb|CCH29178.1| 3'-5' exonuclease [Saccharothrix espanaensis DSM 44229]
Length = 428
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +L + + LL L K +DWS RPL + NYAA+D L+E+ ++ +
Sbjct: 131 GRLAGFERVALGTLVERLLGYRLEKGHGAADWSRRPLPADWLNYAALDVELLVELRDVLE 190
Query: 214 VKVAQKGNSCSSISELDSSN 233
++ ++G ++ E +++
Sbjct: 191 AELKKQGKLEWALEEFEAAR 210
>gi|357120688|ref|XP_003562057.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 690
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L++ F P K+ +D+I+L F C++ FD Q R
Sbjct: 216 LQKHFKDPTKRKVMHGADRDIIWLQRDFRIYVCNL-FDT----------------GQASR 258
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ ++ +K Q +DW +RPL++E YA D H L+ I+++ +++
Sbjct: 259 VLQMERNSLEHLLHHFCGVTANKVYQNADWRSRPLSDEMIKYAREDTHYLLYIYDLMRLR 318
Query: 216 VAQKGNSCSS 225
+ QK ++C +
Sbjct: 319 L-QKESTCEN 327
>gi|329962096|ref|ZP_08300107.1| 3'-5' exonuclease [Bacteroides fluxus YIT 12057]
gi|328530744|gb|EGF57602.1| 3'-5' exonuclease [Bacteroides fluxus YIT 12057]
Length = 231
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + E L L+G+D+E +P + + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPWEAE--KAVTYLKGCPLLGIDSETRPSFT-KGHSHKVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P + K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPII-----TLLETPGVTKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + KSL I L +SK + S+W
Sbjct: 121 RAC-------------------IELQEYVRTFGIQDKSLQKIYGILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L+E QK YAA DA + I+N Q
Sbjct: 162 EADVLSESQKLYAATDAWACLNIYNKLQ 189
>gi|37523316|ref|NP_926693.1| ribonuclease D [Gloeobacter violaceus PCC 7421]
gi|35214320|dbj|BAC91688.1| glr3747 [Gloeobacter violaceus PCC 7421]
Length = 195
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
V TE+ + + L ++ +D E + RVSLLQ+ ++ S+
Sbjct: 9 VLVTETAQLSELVDRWQTRKVLAVDTETAHWHQVSTGKNRVSLLQV-------WDGTSEA 61
Query: 74 SNASVVFLLDLSSIPLPSI--WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG--CD 129
+ F +DL++ ++ WE++K + +P DL YL ++ C
Sbjct: 62 VSVIDCFAVDLTAFVEKTMRNWEIVKLIHNAP----------YDLAYLGGAAQARSVVCT 111
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
+ R P R+ E SL + L I L K Q S+W+ RP
Sbjct: 112 LQMARSIP---------------TSRRGALERNSLKALSAHFLGIELDKRYQASNWALRP 156
Query: 190 LTEEQKNYAAIDAHCLIEIF 209
LT EQ +YAA+D I+
Sbjct: 157 LTAEQLDYAALDPWVTFHIW 176
>gi|313205201|ref|YP_004043858.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
gi|312444517|gb|ADQ80873.1| 3'-5' exonuclease [Paludibacter propionicigenes WB4]
Length = 231
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 39/183 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L +S +VG+D E KP + + + +VSL+Q+ S FL L+ I
Sbjct: 39 LRKSKVVGIDTETKPSFT-RGTYHKVSLVQI--------------STLDHCFLFRLNKID 83
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSS--TFCSQGCDIGFDRVEPYLDITSIYN 146
P+ L E +I K+G + DL L+ F C +DI +I
Sbjct: 84 FPAA---LAEFLSDENIKKIGLSLRDDLNGLNKHHAFKPANC----------VDIQTIVQ 130
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+LG L I L +SK + ++W N LTE+Q+ YAA DA +
Sbjct: 131 SYGILELG---------LQKIYAILFGKKISKSQRLTNWENPELTEQQQRYAATDAWASL 181
Query: 207 EIF 209
+I+
Sbjct: 182 QIY 184
>gi|312196135|ref|YP_004016196.1| 3'-5' exonuclease [Frankia sp. EuI1c]
gi|311227471|gb|ADP80326.1| 3'-5' exonuclease [Frankia sp. EuI1c]
Length = 440
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L E L + + +L L K +DWS RPL E YAA+D L+E+ +
Sbjct: 126 GRLLGYERVGLGMMVERVLGFGLEKGHSAADWSTRPLPEPWLRYAALDVELLVELRDALA 185
Query: 214 VKVAQKGN 221
V++A+ G
Sbjct: 186 VELAETGK 193
>gi|242003018|ref|XP_002422581.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
gi|212505371|gb|EEB09843.1| 3-5 exonuclease, putative [Pediculus humanus corporis]
Length = 522
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 42/182 (23%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
S +G D EW S+ +P V+LLQLA + + + + L LS IP I
Sbjct: 27 SALGFDCEW---VSYHVRYP-VALLQLA----------TYKKDCYLFRLNKLSIIPFELI 72
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
E+ I KLG D +YLS+ + DI RV+ D+
Sbjct: 73 -----EILEDQHIFKLGVLPAIDGLYLSADY-----DI---RVQTTFDL----------- 108
Query: 153 LGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
R L K L ++ K +L I L+K+ + SDW L+ QK YAA+DA I++F
Sbjct: 109 --RYLYPMCKGLGDLAKVVLGIMLNKDGIIAGSDWECHELSYSQKKYAAMDALVAIDVFK 166
Query: 211 IF 212
F
Sbjct: 167 RF 168
>gi|365763245|gb|EHN04775.1| Rrp6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 733
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 129/299 (43%), Gaps = 59/299 (19%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S E + L + + +D E RS+ + V L+Q++ + E D
Sbjct: 219 STELESMLEDLXNTKEIAVDLEHHDYRSY---YGIVCLMQISTR-------ERD------ 262
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D ++ L +L E+F +P I+K+ D+I+L D+G
Sbjct: 263 -YLVD--TLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQR-------DLG------- 305
Query: 139 LDITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
L + +++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ Y
Sbjct: 306 LYVVGLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAY 361
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGIL-EKPDIGNKTVRFKL 256
A D H L+ I++ + K+ + L G+L E ++ + RF+
Sbjct: 362 ARADTHFLLNIYDQLRNKLIESN----------------KLAGVLYESRNVAKR--RFEY 403
Query: 257 CEALDIIRATSYYSQCLPEGVVSRVSY-LNTMPMDESLVKIVRKYGEKILLRECDKAPK 314
+ + ++ YS E + Y N P E LV+ + ++ + ++ R D++P+
Sbjct: 404 SKYRPLTXSSEVYSPIEKESPWKILMYQYNIPPEREVLVRELYQWRD-LIARRDDESPR 461
>gi|325183710|emb|CCA18169.1| exosome complex exonuclease RRP6like protein putativ [Albugo
laibachii Nc14]
Length = 770
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L S +LL ++F P LK+ D+++L D+G
Sbjct: 272 FLVD--TLALRSSLQLLNQVFCDPQKLKVLHGADMDILWLQR-------DLGL------- 315
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N + R L SLA + K+ DI K+ Q +DW RPLTEE YA
Sbjct: 316 ---YVVNMFDTGRAARVLQLPRFSLAYLLKKCCDIEADKQYQLADWRQRPLTEEMTRYAR 372
Query: 200 IDAHCLIEIFNIFQVKVAQK--GNSCSSISELDSSNLDLGLKGILEKPDIG 248
D L+ I+ + ++ K N+ + + E+ + L L+ + KP +
Sbjct: 373 EDTRYLLFIYRKMKEELLLKSDSNAANLVREVHKHSNQLCLQ-VYSKPQVS 422
>gi|262193925|ref|YP_003265134.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
gi|262077272|gb|ACY13241.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
Length = 925
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 139 LDITSIYNHLHHKQLGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
+DI ++++ L + R +E L +C L L K Q SDW+ RPLT+ Q +Y
Sbjct: 844 MDIENVFDTLKVSRRLRGRKREGGHGLGAVCARELGRELDKHEQRSDWTQRPLTQRQLDY 903
Query: 198 AAIDAHCLIEIFNIF 212
AA+DA L+ + F
Sbjct: 904 AALDAEVLLALHERF 918
>gi|417948703|ref|ZP_12591846.1| ribonuclease D [Vibrio splendidus ATCC 33789]
gi|342809314|gb|EGU44435.1| ribonuclease D [Vibrio splendidus ATCC 33789]
Length = 372
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 17/161 (10%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A + E + + L K +DW RPL+++Q NYAA D H L+ ++N KV + G
Sbjct: 115 STGFAALVSEFVGVDLDKSESRTDWLARPLSQKQLNYAAADVHYLMPMYNKLLEKVMEAG 174
Query: 221 -----------NSCSSISELDSSNLDLGLKGILE-KPD---IGNKTVRFKLCEALDIIRA 265
I +++ L +KG+ + KP I ++L EA+ A
Sbjct: 175 WWEAAQQESDLQVTKRIRKVNPDTAYLDIKGVWQLKPQQLAILRPLATWRLKEAIKRDLA 234
Query: 266 TSYYSQCLPEGVVSRVSYLNTMPMDESLVKI--VRKYGEKI 304
++ + V+R + N M+E VR++G KI
Sbjct: 235 LNFIFKEQDLWAVARFAIKNPKRMEEEGFDFRSVRRHGAKI 275
>gi|378549176|ref|ZP_09824392.1| hypothetical protein CCH26_03785 [Citricoccus sp. CH26A]
Length = 385
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
GR L LA++ ++LL ++L+KE +DWS RPL E+ YAA+D L+E+
Sbjct: 98 GRILGLPRVGLASVLEQLLGVTLAKEHSAADWSKRPLPEDWLRYAALDVELLVEL 152
>gi|357146328|ref|XP_003573952.1| PREDICTED: exosome component 10-like [Brachypodium distachyon]
Length = 906
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ E L+E+F P K+ +D+I+L F C++ FD
Sbjct: 326 LGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVCNL-FDT----------------G 368
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L + SL ++ + +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 369 QASRILQMDRNSLEHLLHHFCGVVANKEYQSADWRLRPLPDEMTKYAREDTHYLLYIYDL 428
Query: 212 FQVKVAQK 219
++++ +
Sbjct: 429 MRLRLVNE 436
>gi|283458265|ref|YP_003362884.1| ribonuclease D [Rothia mucilaginosa DY-18]
gi|283134299|dbj|BAI65064.1| ribonuclease D [Rothia mucilaginosa DY-18]
Length = 449
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 137 PYLDITSIY-NHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
P LD+ + N L +LG +L E +L +ELL L+K+ DWS RPL E
Sbjct: 147 PSLDMLGMRPNRLFDTELGARLAGLERVNLGATVEELLGYKLAKKHSKEDWSRRPLPESW 206
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
NYA +D LI++ + + + Q+G ++ E +
Sbjct: 207 LNYALLDVDVLIDLRDALEDLLRQQGKLQYALEEFE 242
>gi|453077526|ref|ZP_21980272.1| ribonuclease D [Rhodococcus triatomae BKS 15-14]
gi|452759201|gb|EME17574.1| ribonuclease D [Rhodococcus triatomae BKS 15-14]
Length = 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + LL + L K DWS RPL E NYAA+D L+E+ + ++ +G +
Sbjct: 112 GLAAVVERLLGLELQKGHGADDWSRRPLPESWLNYAALDVEVLVELRDAMAAELDSQGKT 171
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRF-------------KLCEALDIIRATSYY 269
+ E + L K KPD +T + +L A D I A
Sbjct: 172 DWAAQEFEHIRLAGPPK---PKPDRWRRTSQIHSLKSPRQLAAVRELWRARDEIAARRDI 228
Query: 270 S--QCLPEGVVSRVSYLNTMPMD 290
+ + LP+ ++ + N M +D
Sbjct: 229 APGRILPDSAITAAAAANPMSVD 251
>gi|270283861|ref|ZP_06193723.1| putative ribonuclease D [Bifidobacterium gallicum DSM 20093]
gi|270277581|gb|EFA23435.1| putative ribonuclease D [Bifidobacterium gallicum DSM 20093]
Length = 262
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
R L E LA + + L ++L+KE +DWS+RPL + +NYAA+D LIE+
Sbjct: 123 ARLLGLERFGLAYVTERYLGLTLAKEHSAADWSHRPLPRDWRNYAALDVELLIEL 177
>gi|119482642|ref|XP_001261349.1| 3'-5' exonuclease/helicase (Wrn), putative [Neosartorya fischeri
NRRL 181]
gi|119409504|gb|EAW19452.1| 3'-5' exonuclease/helicase (Wrn), putative [Neosartorya fischeri
NRRL 181]
Length = 383
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFP-RVSLLQLACQPGP 65
K + +H S + E +A+ ++G D EWKPQ S ++ VSL+Q+A
Sbjct: 128 KDIIVHYCKSLKKTE--EVAKYFLNDDVIGFDMEWKPQSSRSASIQNNVSLIQIA----- 180
Query: 66 RFNPESDESNASVVFLLDL-----SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
NA + L + + P I L+++ SP I K G K D L
Sbjct: 181 ---------NAERIALFQIALFKPARTPEDFISPSLRKILESPKITKAGVAIKADCTRLK 231
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSK- 178
+ +G + V +++ +Y + + Q L + +L+ +E + L+K
Sbjct: 232 NF-------LGIN-VRGIFELSHLYKLVKYCQSDPALINRRPVNLSEQVEEHFGLPLAKD 283
Query: 179 -ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+++C DWS L Q YAA D++ + +FN K
Sbjct: 284 DDVRCGDWST-ALNYRQVQYAANDSYACLCLFNTMDAK 320
>gi|317475897|ref|ZP_07935153.1| 3'-5' exonuclease [Bacteroides eggerthii 1_2_48FAA]
gi|316907930|gb|EFV29628.1| 3'-5' exonuclease [Bacteroides eggerthii 1_2_48FAA]
Length = 210
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH+V + + E L + ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVVQTPQEAE--RAVAYLKKCPILGIDSETRPSFTKGQSH-KVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P I K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPIIM-----LLENPGITKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + +SL I L +SK + S+W
Sbjct: 121 RAC-------------------VELQEYVRTFGIQDRSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT Q+ YAA DA + I+N Q
Sbjct: 162 EAEMLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|451855365|gb|EMD68657.1| hypothetical protein COCSADRAFT_157073 [Cochliobolus sativus
ND90Pr]
Length = 791
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P ILK+ D+++L D+G L I +++ H
Sbjct: 278 ECLNEVFADPSILKVLHGAYMDIMWLQR-------DLG-------LYIVGLFDTYH---A 320
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + + + K+ Q +DW RPL+ E YA D H L+ I++ +
Sbjct: 321 ARALGYPGASLAYLLERHVKFTAQKQYQLADWRIRPLSPELFEYARADTHFLLYIYDNMR 380
Query: 214 VKVAQKGN 221
++ +K +
Sbjct: 381 NELVEKSD 388
>gi|415727029|ref|ZP_11471257.1| ribonuclease D [Gardnerella vaginalis 00703Dmash]
gi|388062758|gb|EIK85363.1| ribonuclease D [Gardnerella vaginalis 00703Dmash]
Length = 445
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|379709831|ref|YP_005265036.1| putative RNase D [Nocardia cyriacigeorgica GUH-2]
gi|374847330|emb|CCF64400.1| putative RNase D [Nocardia cyriacigeorgica GUH-2]
Length = 446
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 147 HLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L +LG +L + LA + + LL +L K +DWS RPL E NYAA+D L
Sbjct: 139 RLFDTELGGRLAGFDRVGLAAMVERLLGRALRKGHGAADWSTRPLPEAWLNYAALDVELL 198
Query: 206 IEIFNIFQVKVAQKGNSCSSISELDSSNL 234
+E+ + + Q+G + + E + L
Sbjct: 199 LELRESVAIALHQQGKTEWAAQEFEHVRL 227
>gi|294654453|ref|XP_456510.2| exosome component 3'-5' exonuclease [Debaryomyces hansenii CBS767]
gi|199428893|emb|CAG84465.2| DEHA2A04334p [Debaryomyces hansenii CBS767]
Length = 776
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 38/193 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ S + +D E RS+ + V L+Q++ + +++D ++
Sbjct: 247 LSEQSEIAIDLEHHDYRSY---YGIVCLMQISSRDQD--------------WIID--TLK 287
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
L E L ++F +PDI+K+ D+I+L D+G L I S+++
Sbjct: 288 LRDDLESLNKVFTNPDIVKVFHGAFMDIIWLQR-------DLG-------LYIVSLFDTY 333
Query: 149 H-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIE 207
H K+LG PK SLA + + + SK+ Q +DW RPL+ YA D H L+
Sbjct: 334 HASKKLG--FPKF--SLAYLLETFANFKTSKKYQLADWRIRPLSPPMLAYARSDTHFLLN 389
Query: 208 IFNIFQVKVAQKG 220
I++ + K+ G
Sbjct: 390 IYDQLRNKLIDAG 402
>gi|405967601|gb|EKC32742.1| Werner syndrome ATP-dependent helicase-like protein [Crassostrea
gigas]
Length = 261
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 30/180 (16%)
Query: 33 SLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
S VG D EW P + ++LQL ++A ++ LS I I
Sbjct: 93 SFVGFDMEW-PVSYRPGRQEKTAVLQLC-------------TSADKCYIFHLSCIG--GI 136
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
+L +L SP + K+G + D L D G V P L + L+ Q
Sbjct: 137 PPVLGQLLSSPRVRKVGVGIQSDFWKLER-------DYGLS-VAPILKSCVVDLSLYANQ 188
Query: 153 -LGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
LG KET SL + K L ++K ++ SDWS PLT+ QK+YAA DA+ I+
Sbjct: 189 VLG---SKETWSLDGLVKHLFQRKINKNPIVRKSDWSEFPLTDIQKSYAATDAYVSYLIY 245
>gi|378579869|ref|ZP_09828530.1| ribonuclease D [Pantoea stewartii subsp. stewartii DC283]
gi|377817514|gb|EHU00609.1| ribonuclease D [Pantoea stewartii subsp. stewartii DC283]
Length = 373
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLTE Q YAA D H L+ I + +V Q GN
Sbjct: 117 GFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIAHQLMAQVEQVGNV 176
Query: 223 CSSISE 228
+++SE
Sbjct: 177 TAALSE 182
>gi|170782038|ref|YP_001710370.1| ribonuclease [Clavibacter michiganensis subsp. sepedonicus]
gi|169156606|emb|CAQ01757.1| putative ribonuclease [Clavibacter michiganensis subsp.
sepedonicus]
Length = 443
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 139 LDITSIYN-HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
LD I++ L + LG LP+ L + +ELL I L+KE +DWS RPL Y
Sbjct: 140 LDPQRIFDTELASRLLG--LPR--VGLGTVVEELLGIHLAKEHSAADWSTRPLPRAWLVY 195
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS 232
AA+D L+++ + ++ ++G + + E ++
Sbjct: 196 AALDVELLVDVRDEIARRLEEQGKTAIAEQEFAAT 230
>gi|269956679|ref|YP_003326468.1| 3'-5' exonuclease [Xylanimonas cellulosilytica DSM 15894]
gi|269305360|gb|ACZ30910.1| 3'-5' exonuclease [Xylanimonas cellulosilytica DSM 15894]
Length = 420
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L E LA + + L + L+KE DWS RPL + YAA+D L E+ ++
Sbjct: 140 RLLGLERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPVDWLRYAALDVEVLGEVRDVLAE 199
Query: 215 KVAQKGNSCSSISELDS 231
++A G S + E ++
Sbjct: 200 RLADAGKSEWAAQEFEA 216
>gi|410966022|ref|XP_003989537.1| PREDICTED: exosome component 10 isoform 2 [Felis catus]
Length = 862
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQFQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|415717569|ref|ZP_11466932.1| ribonuclease D [Gardnerella vaginalis 1500E]
gi|388060916|gb|EIK83591.1| ribonuclease D [Gardnerella vaginalis 1500E]
Length = 445
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|443289631|ref|ZP_21028725.1| 3'-5' exonuclease [Micromonospora lupini str. Lupac 08]
gi|385887246|emb|CCH16799.1| 3'-5' exonuclease [Micromonospora lupini str. Lupac 08]
Length = 441
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL +L K +DWS+RPL E YAA+D L ++ + ++ ++
Sbjct: 162 ERVGLAALTEQLLGFTLEKHHSAADWSSRPLPESWLTYAALDVEMLTDLRDALDAELTRQ 221
Query: 220 GNSCSSISEL 229
G S + E
Sbjct: 222 GKSAWAAEEF 231
>gi|238575785|ref|XP_002387790.1| hypothetical protein MPER_13270 [Moniliophthora perniciosa FA553]
gi|215448580|gb|EEB88720.1| hypothetical protein MPER_13270 [Moniliophthora perniciosa FA553]
Length = 361
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 39/202 (19%)
Query: 27 RALSQSSL---VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
+ LSQ ++ VGLD EWKP R H V++LQLA + FL+
Sbjct: 16 KILSQHTIHGHVGLDIEWKPNR-HGDQHNEVAMLQLA--------------TGTETFLIH 60
Query: 84 LSSIP-LPSIWELLKELFVSPDILKLGFKFKQDL------IYLSSTFC--------SQGC 128
++ I LP+I + L SP I K G ++D+ ++S T C S C
Sbjct: 61 VAKIGHLPTI---VTNLLESPLIWKAGVGIQEDVKKLHRDFHVSITSCVDLSMLALSIDC 117
Query: 129 DIGFDRVEPYLDI-TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
+R Y I I N + + K +L+ + K + L+K +DW
Sbjct: 118 LQFEERTGIYSAIPRGIENTAEKHRTYKGHIKRAIALSKLAKSYAGMELTKNNAMTDWEK 177
Query: 188 RPLTEEQKNYAAIDAHCLIEIF 209
+ LT+E+K + DAH I
Sbjct: 178 KDLTQEEKE--SNDAHAGFAIL 197
>gi|167555226|ref|NP_001107878.1| exonuclease 3'-5' domain-containing protein 2 [Danio rerio]
gi|166796362|gb|AAI59254.1| Zgc:175195 protein [Danio rerio]
Length = 617
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 41/219 (18%)
Query: 6 RKPLKIHLV-----TSTESPE-----FTHLARALSQSSLVGLDAEW--KPQRSHQSNFPR 53
+KPL+ H + SP+ + L + LS ++GLD EW + + S +
Sbjct: 67 QKPLRAHTLLEEPPVVISSPQDWDNLWPALQKDLSMYPVLGLDCEWVKRVRVSVKGRVSA 126
Query: 54 VSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP-SIWELLKELFVSPDILKLGFKF 112
VSLLQL+ G +V LL + LP S+ LL++ +LK+G
Sbjct: 127 VSLLQLSSFTG----------RCVLVRLLAFQNAQLPKSLIVLLRD----QRVLKVGVGC 172
Query: 113 KQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELL 172
+D L+ D G L T +L ++ + + SL ++ ++LL
Sbjct: 173 YEDGKRLAQ-------DHGLT-----LSCTVDLRYLALRRSKQAVLTNGLSLKSLAEDLL 220
Query: 173 DISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+++L K EL+CSDW L+ EQ YAA DA I +F
Sbjct: 221 NVTLDKSVELRCSDWEAEELSPEQITYAARDAQISIALF 259
>gi|108799177|ref|YP_639374.1| 3'-5' exonuclease [Mycobacterium sp. MCS]
gi|119868292|ref|YP_938244.1| 3'-5' exonuclease [Mycobacterium sp. KMS]
gi|126434785|ref|YP_001070476.1| 3'-5' exonuclease [Mycobacterium sp. JLS]
gi|108769596|gb|ABG08318.1| 3'-5' exonuclease [Mycobacterium sp. MCS]
gi|119694381|gb|ABL91454.1| 3'-5' exonuclease [Mycobacterium sp. KMS]
gi|126234585|gb|ABN97985.1| 3'-5' exonuclease [Mycobacterium sp. JLS]
Length = 428
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 148 LHHKQLGRKLPKETK-SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
L+ +L +L + +LA + ELL + L K +DWS RPL ++ NYAA+D L+
Sbjct: 138 LYDTELAGRLAGLARVNLATMVSELLGLQLMKGHGAADWSKRPLPDDWLNYAALDVEVLL 197
Query: 207 EIFNIFQVKVAQKGNSCSSISELD 230
E+ + + +G + +I E +
Sbjct: 198 ELRDAVAAVLDDQGKTDWAIQEFE 221
>gi|378767004|ref|YP_005195469.1| ribonuclease D [Pantoea ananatis LMG 5342]
gi|365186482|emb|CCF09432.1| Ribonuclease D [Pantoea ananatis LMG 5342]
Length = 373
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLTE Q YAA D H L+ I + +V Q GN
Sbjct: 117 GFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIAHQLMQQVEQAGNM 176
Query: 223 CSSISE 228
+++SE
Sbjct: 177 AAALSE 182
>gi|410966020|ref|XP_003989536.1| PREDICTED: exosome component 10 isoform 1 [Felis catus]
Length = 887
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQFQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|291617685|ref|YP_003520427.1| Rnd [Pantoea ananatis LMG 20103]
gi|291152715|gb|ADD77299.1| Rnd [Pantoea ananatis LMG 20103]
Length = 373
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLTE Q YAA D H L+ I + +V Q GN
Sbjct: 117 GFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIAHQLMQQVEQAGNM 176
Query: 223 CSSISE 228
+++SE
Sbjct: 177 AAALSE 182
>gi|242034371|ref|XP_002464580.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
gi|241918434|gb|EER91578.1| hypothetical protein SORBIDRAFT_01g021230 [Sorghum bicolor]
Length = 882
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ + L+E F P K+ +D+I+L F C++ FD
Sbjct: 305 LGDYLREFFRDPTKKKVMHGAGRDIIWLQRDFSIYVCNL-FDT----------------G 347
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q + L + SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++
Sbjct: 348 QASKVLQMDRNSLEHLLHHFCGVTANKEYQAADWRLRPLPDEMIKYAREDTHYLLYIYDL 407
Query: 212 FQVKVAQK 219
++++ +
Sbjct: 408 MRLRLVNE 415
>gi|260790959|ref|XP_002590508.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
gi|229275702|gb|EEN46519.1| hypothetical protein BRAFLDRAFT_124507 [Branchiostoma floridae]
Length = 832
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ ++ L + +L + F P ++K+ D+ +L F ++ FD T
Sbjct: 325 VDTLALRADLHVLNDTFTDPKVVKVFHGADMDIQWLQRDFGVYVVNM-FD--------TG 375
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
+H+ LG LP+ SLA + K D+ K+ Q +DW RPL E YA D H
Sbjct: 376 QASHV----LG--LPRH--SLAYLLKTYCDVEPDKKYQLADWRIRPLPSEMTQYAREDTH 427
Query: 204 CLIEIFNIFQVKVAQKGNSCSSI 226
L+ I++ + ++ +GN+ +++
Sbjct: 428 YLLHIYDCMRSELLDRGNNEANL 450
>gi|197927293|ref|NP_001128149.1| Werner syndrome ATP-dependent helicase [Pongo abelii]
gi|55726573|emb|CAH90053.1| hypothetical protein [Pongo abelii]
Length = 1486
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 35/193 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
++ +LS +VG D EW P + +V+L+QL ES + + +
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLYK-KRKLGKVALIQLCVS----------ESKCYLFHISSM 117
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L + + K G + D L F DI +++ ++++ +
Sbjct: 118 SVFP-----QGLKMLLENKAVKKAGVGIEGDQWKLLRDF-----DI---KLKNFVELADV 164
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N +KL ET SL ++ K L L K ++CS+WS PLTE+QK YAA D
Sbjct: 165 AN--------KKLKCTETWSLNSLVKHPLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATD 216
Query: 202 AHCLIEIFNIFQV 214
A+ I+ ++
Sbjct: 217 AYAGFIIYRNLEI 229
>gi|83645396|ref|YP_433831.1| ribonuclease D [Hahella chejuensis KCTC 2396]
gi|83633439|gb|ABC29406.1| ribonuclease D [Hahella chejuensis KCTC 2396]
Length = 398
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
V+L+D+ I + W + LF S DILK+ +DL + SQ C +
Sbjct: 66 VYLVDMLKI---TDWSGVSRLFESRDILKVVHACSEDLELFNCVGLSQPCGL-------- 114
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+D T + N L +L + L ++ ++ L I L K SDW+ RPLT++Q YA
Sbjct: 115 ID-TQVANALLDGEL-------NEGLQSLVRQNLGIELEKHATRSDWTQRPLTDKQIQYA 166
Query: 199 AIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNL 234
D L ++ + G ++ E ++ L
Sbjct: 167 QEDVVVLWPLYQKLAEALRLSGKYEIALEEGEAMRL 202
>gi|386079174|ref|YP_005992699.1| ribonuclease D Rnd [Pantoea ananatis PA13]
gi|354988355|gb|AER32479.1| ribonuclease D Rnd [Pantoea ananatis PA13]
Length = 373
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLTE Q YAA D H L+ I + +V Q GN
Sbjct: 117 GFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIAHQLMQQVEQAGNM 176
Query: 223 CSSISE 228
+++SE
Sbjct: 177 AAALSE 182
>gi|169630071|ref|YP_001703720.1| hypothetical protein MAB_2988 [Mycobacterium abscessus ATCC 19977]
gi|420910597|ref|ZP_15373909.1| ribonuclease III [Mycobacterium abscessus 6G-0125-R]
gi|420917049|ref|ZP_15380353.1| ribonuclease III [Mycobacterium abscessus 6G-0125-S]
gi|420922214|ref|ZP_15385511.1| ribonuclease III [Mycobacterium abscessus 6G-0728-S]
gi|420927876|ref|ZP_15391158.1| ribonuclease III [Mycobacterium abscessus 6G-1108]
gi|420967485|ref|ZP_15430689.1| ribonuclease III [Mycobacterium abscessus 3A-0810-R]
gi|420978216|ref|ZP_15441394.1| ribonuclease III [Mycobacterium abscessus 6G-0212]
gi|420983601|ref|ZP_15446768.1| ribonuclease III [Mycobacterium abscessus 6G-0728-R]
gi|421007806|ref|ZP_15470917.1| ribonuclease III [Mycobacterium abscessus 3A-0119-R]
gi|421013569|ref|ZP_15476650.1| ribonuclease III [Mycobacterium abscessus 3A-0122-R]
gi|421018518|ref|ZP_15481576.1| ribonuclease III [Mycobacterium abscessus 3A-0122-S]
gi|421025191|ref|ZP_15488235.1| ribonuclease III [Mycobacterium abscessus 3A-0731]
gi|421029834|ref|ZP_15492866.1| ribonuclease III [Mycobacterium abscessus 3A-0930-R]
gi|421035103|ref|ZP_15498123.1| ribonuclease III [Mycobacterium abscessus 3A-0930-S]
gi|169242038|emb|CAM63066.1| Conserved hypothetical protein (putative exonuclease)
[Mycobacterium abscessus]
gi|392112591|gb|EIU38360.1| ribonuclease III [Mycobacterium abscessus 6G-0125-R]
gi|392121189|gb|EIU46955.1| ribonuclease III [Mycobacterium abscessus 6G-0125-S]
gi|392132050|gb|EIU57796.1| ribonuclease III [Mycobacterium abscessus 6G-0728-S]
gi|392135109|gb|EIU60850.1| ribonuclease III [Mycobacterium abscessus 6G-1108]
gi|392166490|gb|EIU92175.1| ribonuclease III [Mycobacterium abscessus 6G-0212]
gi|392168597|gb|EIU94275.1| ribonuclease III [Mycobacterium abscessus 6G-0728-R]
gi|392199259|gb|EIV24869.1| ribonuclease III [Mycobacterium abscessus 3A-0119-R]
gi|392201917|gb|EIV27515.1| ribonuclease III [Mycobacterium abscessus 3A-0122-R]
gi|392208393|gb|EIV33967.1| ribonuclease III [Mycobacterium abscessus 3A-0122-S]
gi|392211988|gb|EIV37554.1| ribonuclease III [Mycobacterium abscessus 3A-0731]
gi|392224586|gb|EIV50106.1| ribonuclease III [Mycobacterium abscessus 3A-0930-R]
gi|392225835|gb|EIV51350.1| ribonuclease III [Mycobacterium abscessus 3A-0930-S]
gi|392249992|gb|EIV75466.1| ribonuclease III [Mycobacterium abscessus 3A-0810-R]
Length = 400
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA++ LL + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 125 GRLAGFEKVNLASMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLVELRDKIA 184
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E +
Sbjct: 185 EVLAEQGKTEWARQEFE 201
>gi|336369802|gb|EGN98143.1| hypothetical protein SERLA73DRAFT_91376 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382569|gb|EGO23719.1| hypothetical protein SERLADRAFT_450051 [Serpula lacrymans var.
lacrymans S7.9]
Length = 879
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQLG 154
L E+F P I+K+ + D+++L F L I ++++ H K +G
Sbjct: 308 LNEVFTDPRIVKVFHGAESDIVWLQQDFN--------------LYIVNLFDTFHASKAIG 353
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
PK LA++ + D + K+ Q +DW RPL +E YA D H L+ I++ +
Sbjct: 354 --FPKH--GLASLLEMYCDFTPDKQYQLADWRMRPLPDEMLAYARSDTHYLLFIYDNLRN 409
Query: 215 KVAQKGNSCSSISELDSSN 233
+ S + S+ +SS+
Sbjct: 410 ALIDLAQSRAQSSQNESSS 428
>gi|255327433|ref|ZP_05368506.1| ribonuclease D [Rothia mucilaginosa ATCC 25296]
gi|255295501|gb|EET74845.1| ribonuclease D [Rothia mucilaginosa ATCC 25296]
Length = 421
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 137 PYLDITSIY-NHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
P LD+ + N L +LG +L E +L +ELL L+K+ DWS RPL E
Sbjct: 119 PSLDMLGMRPNRLFDTELGARLAGLERVNLGAAVEELLGYKLAKKHSKEDWSRRPLPESW 178
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
NYA +D LI++ + + + Q+G ++ E +
Sbjct: 179 LNYALLDVDVLIDLRDAMEDLLRQQGKLQYALEEFE 214
>gi|390443237|ref|ZP_10231033.1| transporter, nhac family protein [Nitritalea halalkaliphila LW7]
gi|389667079|gb|EIM78512.1| transporter, nhac family protein [Nitritalea halalkaliphila LW7]
Length = 714
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 44/205 (21%)
Query: 10 KIHLVTSTESPEFTHLA-RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
KIHL+ + PE A L + +++G D E +P + + +VSLLQL+ N
Sbjct: 537 KIHLI---DKPEQVQEAFERLREETVIGFDTETRPSFRKGTQY-KVSLLQLST------N 586
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSS---TFCS 125
E+ FL L + P +K L + DILK+G DL L TF
Sbjct: 587 EEA--------FLFRLQHVGFPP---QIKGLLENQDILKVGAAVLDDLRALRKLDPTFLE 635
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
Q + D+ + + +G + N+ +L+I +SK Q S+W
Sbjct: 636 QN----------FFDLNEELKRVGFQNVGVR---------NLSAMVLNIRISKSEQVSNW 676
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFN 210
L+++Q YAA DA + IF+
Sbjct: 677 EADMLSDKQLLYAATDAWACLAIFD 701
>gi|419709773|ref|ZP_14237241.1| 3'-5' exonuclease [Mycobacterium abscessus M93]
gi|419716748|ref|ZP_14244143.1| 3'-5' exonuclease [Mycobacterium abscessus M94]
gi|420864384|ref|ZP_15327774.1| ribonuclease III [Mycobacterium abscessus 4S-0303]
gi|420869175|ref|ZP_15332557.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RA]
gi|420873619|ref|ZP_15336996.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RB]
gi|420989830|ref|ZP_15452986.1| ribonuclease III [Mycobacterium abscessus 4S-0206]
gi|421040139|ref|ZP_15503148.1| ribonuclease III [Mycobacterium abscessus 4S-0116-R]
gi|421043974|ref|ZP_15506975.1| ribonuclease III [Mycobacterium abscessus 4S-0116-S]
gi|382940309|gb|EIC64633.1| 3'-5' exonuclease [Mycobacterium abscessus M94]
gi|382943654|gb|EIC67968.1| 3'-5' exonuclease [Mycobacterium abscessus M93]
gi|392068645|gb|EIT94492.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RA]
gi|392071359|gb|EIT97205.1| ribonuclease III [Mycobacterium abscessus 4S-0303]
gi|392072647|gb|EIT98488.1| ribonuclease III [Mycobacterium abscessus 4S-0726-RB]
gi|392184109|gb|EIV09760.1| ribonuclease III [Mycobacterium abscessus 4S-0206]
gi|392225231|gb|EIV50750.1| ribonuclease III [Mycobacterium abscessus 4S-0116-R]
gi|392237826|gb|EIV63320.1| ribonuclease III [Mycobacterium abscessus 4S-0116-S]
Length = 400
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA++ LL + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 125 GRLAGFEKVNLASMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLVELRDKIA 184
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E +
Sbjct: 185 EVLAEQGKTEWARQEFE 201
>gi|415729490|ref|ZP_11472516.1| ribonuclease D [Gardnerella vaginalis 6119V5]
gi|388064524|gb|EIK87058.1| ribonuclease D [Gardnerella vaginalis 6119V5]
Length = 445
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|189184295|ref|YP_001938080.1| ribonuclease D [Orientia tsutsugamushi str. Ikeda]
gi|189181066|dbj|BAG40846.1| ribonuclease D [Orientia tsutsugamushi str. Ikeda]
Length = 210
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPK---ETKSLANICKELLDISLSKELQCSDWSNRPLT 191
++ YL +T N++ + KL + ++ L ++C+ELL I +SK+ Q SDW + LT
Sbjct: 93 IQYYLGVT--LNNIFCTNVASKLVRTYTDSHGLKDLCRELLGIQISKQCQSSDWGGQSLT 150
Query: 192 EEQKNYAAIDAHCLIEIFNIFQ 213
+Q+ YAA D L I NI +
Sbjct: 151 SDQEEYAAKDVVYLHRIKNILE 172
>gi|403418903|emb|CCM05603.1| predicted protein [Fibroporia radiculosa]
Length = 751
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+ P I+K+ + D+I+L F L I ++++ H ++
Sbjct: 202 EALNEVLTDPAIVKVLHGAESDIIWLQQDFN--------------LYIVNLFDTYHASKI 247
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ P+ SLA + + D + K Q +DW RPL EE YA D H L+ I++ +
Sbjct: 248 -LEFPRH--SLATLLEMYCDFTADKRYQLADWRIRPLPEEMLAYARSDTHFLLFIYDNLR 304
Query: 214 VKVAQKGNS 222
+ + S
Sbjct: 305 NALIDRAQS 313
>gi|400601943|gb|EJP69568.1| 3'-5' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 802
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH-KQ 152
E+L E F P I+K+ D+++L D+G L + +++ +Q
Sbjct: 285 EILNEAFADPSIIKVFHGAYMDMVWLQR-------DLG-------LYVNGLFDTFFACEQ 330
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG +SLA + + D K+ Q +DW RP+ EE YA D H L+ I++
Sbjct: 331 LGYS----GRSLAFLLSKFADFDADKQYQLADWRIRPIPEEMLYYARSDTHYLLHIYDQV 386
Query: 213 QVKVAQKGNSCSSISEL 229
+ + N + +L
Sbjct: 387 RNDLVSSSNRSAPEQDL 403
>gi|365870911|ref|ZP_09410452.1| hypothetical protein MMAS_28540 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|397679858|ref|YP_006521393.1| ribonuclease D [Mycobacterium massiliense str. GO 06]
gi|414584634|ref|ZP_11441774.1| ribonuclease III [Mycobacterium abscessus 5S-1215]
gi|418247873|ref|ZP_12874259.1| 3'-5' exonuclease [Mycobacterium abscessus 47J26]
gi|420878742|ref|ZP_15342109.1| ribonuclease III [Mycobacterium abscessus 5S-0304]
gi|420885673|ref|ZP_15349033.1| ribonuclease III [Mycobacterium abscessus 5S-0421]
gi|420889577|ref|ZP_15352925.1| ribonuclease III [Mycobacterium abscessus 5S-0422]
gi|420896274|ref|ZP_15359613.1| ribonuclease III [Mycobacterium abscessus 5S-0708]
gi|420899545|ref|ZP_15362877.1| ribonuclease III [Mycobacterium abscessus 5S-0817]
gi|420906083|ref|ZP_15369401.1| ribonuclease III [Mycobacterium abscessus 5S-1212]
gi|420932091|ref|ZP_15395366.1| ribonuclease III [Mycobacterium massiliense 1S-151-0930]
gi|420938975|ref|ZP_15402244.1| ribonuclease III [Mycobacterium massiliense 1S-152-0914]
gi|420942348|ref|ZP_15405605.1| ribonuclease III [Mycobacterium massiliense 1S-153-0915]
gi|420946622|ref|ZP_15409872.1| ribonuclease III [Mycobacterium massiliense 1S-154-0310]
gi|420952608|ref|ZP_15415852.1| ribonuclease III [Mycobacterium massiliense 2B-0626]
gi|420956777|ref|ZP_15420014.1| ribonuclease III [Mycobacterium massiliense 2B-0107]
gi|420961845|ref|ZP_15425070.1| ribonuclease III [Mycobacterium massiliense 2B-1231]
gi|420972953|ref|ZP_15436146.1| ribonuclease III [Mycobacterium abscessus 5S-0921]
gi|420992736|ref|ZP_15455883.1| ribonuclease III [Mycobacterium massiliense 2B-0307]
gi|420998587|ref|ZP_15461724.1| ribonuclease III [Mycobacterium massiliense 2B-0912-R]
gi|421003024|ref|ZP_15466148.1| ribonuclease III [Mycobacterium massiliense 2B-0912-S]
gi|421049988|ref|ZP_15512982.1| ribonuclease III [Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353452366|gb|EHC00760.1| 3'-5' exonuclease [Mycobacterium abscessus 47J26]
gi|363994714|gb|EHM15932.1| hypothetical protein MMAS_28540 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392081436|gb|EIU07262.1| ribonuclease III [Mycobacterium abscessus 5S-0421]
gi|392083651|gb|EIU09476.1| ribonuclease III [Mycobacterium abscessus 5S-0304]
gi|392087325|gb|EIU13147.1| ribonuclease III [Mycobacterium abscessus 5S-0422]
gi|392095586|gb|EIU21381.1| ribonuclease III [Mycobacterium abscessus 5S-0708]
gi|392100892|gb|EIU26683.1| ribonuclease III [Mycobacterium abscessus 5S-0817]
gi|392103987|gb|EIU29773.1| ribonuclease III [Mycobacterium abscessus 5S-1212]
gi|392119786|gb|EIU45554.1| ribonuclease III [Mycobacterium abscessus 5S-1215]
gi|392136850|gb|EIU62587.1| ribonuclease III [Mycobacterium massiliense 1S-151-0930]
gi|392144490|gb|EIU70215.1| ribonuclease III [Mycobacterium massiliense 1S-152-0914]
gi|392149775|gb|EIU75489.1| ribonuclease III [Mycobacterium massiliense 1S-153-0915]
gi|392153652|gb|EIU79358.1| ribonuclease III [Mycobacterium massiliense 1S-154-0310]
gi|392157920|gb|EIU83617.1| ribonuclease III [Mycobacterium massiliense 2B-0626]
gi|392165845|gb|EIU91531.1| ribonuclease III [Mycobacterium abscessus 5S-0921]
gi|392185520|gb|EIV11169.1| ribonuclease III [Mycobacterium massiliense 2B-0307]
gi|392186399|gb|EIV12046.1| ribonuclease III [Mycobacterium massiliense 2B-0912-R]
gi|392194482|gb|EIV20102.1| ribonuclease III [Mycobacterium massiliense 2B-0912-S]
gi|392238591|gb|EIV64084.1| ribonuclease III [Mycobacterium massiliense CCUG 48898]
gi|392249310|gb|EIV74785.1| ribonuclease III [Mycobacterium massiliense 2B-1231]
gi|392253676|gb|EIV79144.1| ribonuclease III [Mycobacterium massiliense 2B-0107]
gi|395458123|gb|AFN63786.1| Ribonuclease D [Mycobacterium massiliense str. GO 06]
Length = 400
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA++ LL + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 125 GRLAGFEKVNLASMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLVELRDKIA 184
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E +
Sbjct: 185 EVLAEQGKTEWARQEFE 201
>gi|159465862|ref|XP_001691139.1| hypothetical protein CHLREDRAFT_180814 [Chlamydomonas reinhardtii]
gi|158270331|gb|EDO96190.1| predicted protein [Chlamydomonas reinhardtii]
Length = 284
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 41/195 (21%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
RA ++ +D EW+P+ + P V+L+QLA +A+ LL +S+
Sbjct: 84 RASMTDRVIAIDLEWRPETVAGRSSP-VALVQLA--------------SATTCVLLRVSA 128
Query: 87 ----IPLPSIWELLKELFVSPDILKLGFKF-KQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
+P P + P ++ LGF + D + STF IG R ++D+
Sbjct: 129 MGYILPAP-----VTAFLSDPSLVILGFGWDGADEAKMKSTF-----GIGKARFRRFIDL 178
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAA 199
+++ R L LA + +++L + L SK + S+W+ LT Q YA+
Sbjct: 179 ---------QEVARTLGYHGYGLARLTRQVLGVPLHKSKSVSRSNWAAPQLTAHQLKYAS 229
Query: 200 IDAHCLIEIFNIFQV 214
+D ++F ++
Sbjct: 230 LDVLAAGQLFRALRL 244
>gi|402496589|ref|YP_006555849.1| 3'-5' exonuclease [Wolbachia endosymbiont of Onchocerca ochengi]
gi|398649862|emb|CCF78032.1| 3'-5' exonuclease [Wolbachia endosymbiont of Onchocerca ochengi]
Length = 206
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
+ SL +C ELLDI L+K+ Q SDW + LT++QKNYAA D
Sbjct: 113 DNHSLKELCLELLDIKLNKQQQSSDWGSESLTDKQKNYAASD 154
>gi|169767462|ref|XP_001818202.1| exosome component 3'-5' exonuclease [Aspergillus oryzae RIB40]
gi|83766057|dbj|BAE56200.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871959|gb|EIT81108.1| exosome 3'-5' exoribonuclease [Aspergillus oryzae 3.042]
Length = 760
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P ILK+ D+I+L D+G L + +++ +H
Sbjct: 283 QMLNEVFADPSILKVFHGSSMDIIWLQR-------DLG-------LYVVGMFD-TYHAAC 327
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
PK +SL + ++ ++ K Q +DW RP+ E +YA D H L+ IF+
Sbjct: 328 ALNYPK--RSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIFD 382
>gi|407923871|gb|EKG16934.1| hypothetical protein MPH_05915 [Macrophomina phaseolina MS6]
Length = 817
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+ L E+F P ILK+ D I+L D+G L + +++ HH
Sbjct: 282 QALNEVFTDPHILKVLHGAYMDAIWLQR-------DLG-------LYLVGLFD-THHA-- 324
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + ++ + + K+ Q +DW RPL +E +YA D H L+ I++ +
Sbjct: 325 ARALGYSGGSLAFLLQKFIHFNAQKQYQTADWRMRPLPQELFDYARSDTHFLLYIYDNMR 384
Query: 214 VKVAQKGN 221
++ K +
Sbjct: 385 NELVDKSS 392
>gi|297243353|ref|ZP_06927286.1| ribonuclease D [Gardnerella vaginalis AMD]
gi|296888600|gb|EFH27339.1| ribonuclease D [Gardnerella vaginalis AMD]
Length = 476
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|169617554|ref|XP_001802191.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
gi|111059251|gb|EAT80371.1| hypothetical protein SNOG_11959 [Phaeosphaeria nodorum SN15]
Length = 805
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P+ILK+ D+++L D+G L I +++ HH
Sbjct: 295 ECLNEVFADPNILKVLHGAYMDIMWLQR-------DLG-------LYIVGLFD-THHA-- 337
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + + K+ Q +DW RPL +E YA D H L+ IF+ +
Sbjct: 338 ARSLGYPGGSLAYLLERHVQFKAQKQYQLADWRIRPLGKELFEYARADTHFLLYIFDNMR 397
Query: 214 VKVAQKGN 221
++ ++ +
Sbjct: 398 NELVERSD 405
>gi|377562762|ref|ZP_09792130.1| ribonuclease D [Gordonia sputi NBRC 100414]
gi|377530059|dbj|GAB37295.1| ribonuclease D [Gordonia sputi NBRC 100414]
Length = 426
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L + +LA + L++ L K +DWS RPL ++ NYAA+D L+E+ + Q
Sbjct: 132 GRLLGEPKVNLAAMVATYLELGLQKGHGAADWSRRPLPDDWLNYAALDVEVLVELRDAVQ 191
Query: 214 VKVAQKG 220
+ ++G
Sbjct: 192 QALVEQG 198
>gi|321465482|gb|EFX76483.1| hypothetical protein DAPPUDRAFT_226045 [Daphnia pulex]
Length = 544
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
+V +TE+ F HL R L +++G+D E RS++ L+Q++ +D
Sbjct: 99 MVDTTEA--FEHLLRDLLSQTVIGVDLEHHSDRSYRGI---TCLMQIS----------TD 143
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
+++ +++D ++ L + L ++F P+I+K+ D+I+L F
Sbjct: 144 KTD----YIID--TLQLWDHLQPLNKVFCDPNIVKIFQGADSDVIWLQRDFG-------- 189
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
+ + ++++ L Q L + K L + + + ++K+ Q +DW RPL +
Sbjct: 190 ------IYVVNLFDTL---QAASLLGFQKKGLYFLLQHYCQVHVNKKYQLADWRIRPLPQ 240
Query: 193 EQKNYAAIDAHCLIEIF 209
E YA D H LI I+
Sbjct: 241 EMVKYAREDTHYLIYIY 257
>gi|145594075|ref|YP_001158372.1| 3'-5' exonuclease [Salinispora tropica CNB-440]
gi|145303412|gb|ABP53994.1| 3'-5' exonuclease [Salinispora tropica CNB-440]
Length = 451
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + + LL SL K +DWS+RPL E YAA+D L+E+ + ++ ++
Sbjct: 170 ERVGLAALTENLLGFSLEKHHSAADWSSRPLPESWLTYAALDVELLVELRDALDAELTRQ 229
Query: 220 GN 221
G
Sbjct: 230 GK 231
>gi|51013151|gb|AAT92869.1| YOR001W [Saccharomyces cerevisiae]
Length = 733
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 38/211 (18%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S E + L + + +D E RS+ + V L+Q++ + E D
Sbjct: 219 STELESMLEDLKNTKEIAVDLEHHDYRSY---YGIVCLMQISTR-------ERD------ 262
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D ++ L +L E+F +P I+K+ D+I+L D+G
Sbjct: 263 -YLVD--TLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQR-------DLG------- 305
Query: 139 LDITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
L + +++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ Y
Sbjct: 306 LYVVGLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAY 361
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
A D H L+ I++ + K+ + + E
Sbjct: 362 ARADTHFLLNIYDQLRNKLIESNKLAGVLYE 392
>gi|452004410|gb|EMD96866.1| hypothetical protein COCHEDRAFT_1085740 [Cochliobolus
heterostrophus C5]
Length = 792
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P ILK+ D+++L D+G L I +++ H
Sbjct: 278 ECLNEVFADPSILKVLHGAYMDIMWLQR-------DLG-------LYIVGLFDTYH---A 320
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + + + K+ Q +DW RPL+ E YA D H L+ I++ +
Sbjct: 321 ARALGYPGASLAYLLERHVKFTAQKQYQLADWRIRPLSPELFEYARADTHFLLYIYDNMR 380
Query: 214 VKVAQKGN 221
++ +K +
Sbjct: 381 NELIEKSD 388
>gi|168005501|ref|XP_001755449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693577|gb|EDQ79929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 824
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 67 FNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ 126
F P S S +L+D +I L LL +F +P ILK+ D ++L F
Sbjct: 103 FIPLIQISTYSTDYLVD--AIALHDDMHLLHPIFANPAILKIFHGADNDSLWLQRDF--- 157
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
++ I ++++ + L K +SLA + + +S K Q SDW
Sbjct: 158 -----------HIYIVNLFDTARACDV---LGKPQRSLAYLLQLYCGVSTKKIYQRSDWR 203
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
RPL E + YA DAH L+ I + + Q N+ S +++
Sbjct: 204 VRPLPAEMEIYARTDAHYLLYIAQCMRANLVQACNTPSLLND 245
>gi|118618645|ref|YP_906977.1| hypothetical protein MUL_3315 [Mycobacterium ulcerans Agy99]
gi|183982048|ref|YP_001850339.1| hypothetical protein MMAR_2035 [Mycobacterium marinum M]
gi|443490446|ref|YP_007368593.1| ribonuclease D [Mycobacterium liflandii 128FXT]
gi|118570755|gb|ABL05506.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183175374|gb|ACC40484.1| conserved hypothetical protein [Mycobacterium marinum M]
gi|442582943|gb|AGC62086.1| ribonuclease D [Mycobacterium liflandii 128FXT]
Length = 435
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR + +LA + + LL + L K +DWS RPL + NYAA+D LIE+ +
Sbjct: 139 GRLAGYDRVNLATMVERLLGMGLVKGHGAADWSKRPLPSDWLNYAALDVELLIELRSAIS 198
Query: 214 VKVAQKGNSCSSISELD 230
+A++G S + E +
Sbjct: 199 GVLAEQGKSDWAAQEFE 215
>gi|415708748|ref|ZP_11462762.1| ribonuclease D [Gardnerella vaginalis 6420LIT]
gi|415709156|ref|ZP_11462889.1| ribonuclease D [Gardnerella vaginalis 6420B]
gi|388054647|gb|EIK77585.1| ribonuclease D [Gardnerella vaginalis 6420LIT]
gi|388056570|gb|EIK79433.1| ribonuclease D [Gardnerella vaginalis 6420B]
Length = 476
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ + ++ ++G
Sbjct: 180 VMRGELKKQG 189
>gi|310287702|ref|YP_003938960.1| ribonuclease D [Bifidobacterium bifidum S17]
gi|309251638|gb|ADO53386.1| Ribonuclease D [Bifidobacterium bifidum S17]
Length = 428
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + + L ++ +KE +DWS RPL + +NYAA+D LIE+ Q ++ +G
Sbjct: 132 GLAAVTEHYLGVTFAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRKMQRELKVQGKD 191
Query: 223 CSSISELDSSNLDLGLKGILEKP 245
+ E + L G+ E P
Sbjct: 192 GWADEEFRYA-LQTGMGPRREHP 213
>gi|297561776|ref|YP_003680750.1| 3'-5' exonuclease [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846224|gb|ADH68244.1| 3'-5' exonuclease [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 421
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 41/225 (18%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L + L + + LL + L+KE DWS RPL E+ YAA+D LI++ + +
Sbjct: 137 GRLLGYQRVGLGFMVERLLHLRLAKEHSAVDWSQRPLPEDWLRYAALDVEILIDLRDSLE 196
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKP------DIGNKTV---RFKLCEALDIIR 264
V++ + G + E +L P D +T R + AL +R
Sbjct: 197 VELEETGKLEWAREE---------FAAVLSAPPKEPRTDPWRRTSGIHRVRNQRALAAVR 247
Query: 265 ATSYY------------SQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRECDKA 312
Y + LP+ + V MP + + +R++G K+ R
Sbjct: 248 ELWYERDRIAQERDISPGRVLPDAAI--VEAATAMPRTTTELAKIRQFGIKLARRYL--- 302
Query: 313 PKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYP 357
T+ K R+ + + R + GD GPPP ++ GD P
Sbjct: 303 --TTWIKAVNRARDMPQAELPRPNAPGD--GPPP--VNRWGDRAP 341
>gi|415723128|ref|ZP_11469302.1| ribonuclease D [Gardnerella vaginalis 00703C2mash]
gi|388063578|gb|EIK86147.1| ribonuclease D [Gardnerella vaginalis 00703C2mash]
Length = 460
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 180 VMSSELKKQG 189
>gi|307177174|gb|EFN66407.1| Exosome component 10 [Camponotus floridanus]
Length = 1189
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S + +L+D ++ L S L E+F P ILK+ D+++L
Sbjct: 277 STVNTDYLID--TLALRSELHQLNEIFTKPTILKIFHGADMDILWLQRDLS--------- 325
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
+ N Q ++L SLA + + I+ +K Q +DW RPL EE
Sbjct: 326 --------LYVVNMFDTHQAAKQLNLPYLSLAYLLNKYCGINPNKHFQLADWRIRPLPEE 377
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
YA D H L+ I ++ + ++ + N S+I
Sbjct: 378 LMKYAREDTHYLLHIKDMLKNELIETANGKSNI 410
>gi|163752438|ref|ZP_02159629.1| ribonuclease D [Shewanella benthica KT99]
gi|161327662|gb|EDP98855.1| ribonuclease D [Shewanella benthica KT99]
Length = 380
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 165 ANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCS 224
A + ++ LDISL K +DW RPL+E Q NYAA D + L ++ K+ Q+G
Sbjct: 128 AKLVEQTLDISLDKGESRTDWMKRPLSEAQLNYAANDVYYLYNLYPQLLEKLQQQGRLAW 187
Query: 225 SISELDSSNLDLGLKGILEKPDIGNKTVRFK 255
I E + +G L PD+ ++ K
Sbjct: 188 VIEEGERMT-----RGRLTPPDLDQAYLKVK 213
>gi|6324574|ref|NP_014643.1| Rrp6p [Saccharomyces cerevisiae S288c]
gi|14195186|sp|Q12149.1|RRP6_YEAST RecName: Full=Exosome complex exonuclease RRP6; AltName:
Full=Ribosomal RNA-processing protein 6
gi|1150996|gb|AAC49480.1| hypothetical protein UNC733 [Saccharomyces cerevisiae]
gi|1420088|emb|CAA99189.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814890|tpg|DAA10783.1| TPA: Rrp6p [Saccharomyces cerevisiae S288c]
Length = 733
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 38/211 (18%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S E + L + + +D E RS+ + V L+Q++ + E D
Sbjct: 219 STELESMLEDLKNTKEIAVDLEHHDYRSY---YGIVCLMQISTR-------ERD------ 262
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D ++ L +L E+F +P I+K+ D+I+L D+G
Sbjct: 263 -YLVD--TLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQR-------DLG------- 305
Query: 139 LDITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
L + +++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ Y
Sbjct: 306 LYVVGLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAY 361
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
A D H L+ I++ + K+ + + E
Sbjct: 362 ARADTHFLLNIYDQLRNKLIESNKLAGVLYE 392
>gi|311742288|ref|ZP_07716097.1| ribonuclease D [Aeromicrobium marinum DSM 15272]
gi|311313916|gb|EFQ83824.1| ribonuclease D [Aeromicrobium marinum DSM 15272]
Length = 411
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ GR L LA + + L SL+KE +DWS RPL E YAA+D L+E+ +
Sbjct: 129 EHAGRLLNLPRVGLATLVEHFLGRSLAKEHSAADWSTRPLPEPWLVYAALDVEVLVELRD 188
Query: 211 IFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTV---RFKLCEALDIIRA 265
+ ++ + G + + ++ L G EK + +T R + L ++RA
Sbjct: 189 LLDAELREAGKREWAAQDFEAL---LSFTGPPEKTERWRRTSGMHRVRGRRTLALVRA 243
>gi|209542515|ref|YP_002274744.1| 3'-5' exonuclease [Gluconacetobacter diazotrophicus PAl 5]
gi|209530192|gb|ACI50129.1| 3'-5' exonuclease [Gluconacetobacter diazotrophicus PAl 5]
Length = 210
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA +C+ELL + LSK+ Q SDW LT EQK YAA D L ++ + + ++
Sbjct: 117 ERHGLAQLCRELLGVDLSKQQQTSDWGAPELTPEQKAYAASDVLHLHALWTKLEALLHRE 176
Query: 220 GN 221
G
Sbjct: 177 GR 178
>gi|418421090|ref|ZP_12994266.1| hypothetical protein MBOL_28120 [Mycobacterium abscessus subsp.
bolletii BD]
gi|363997557|gb|EHM18768.1| hypothetical protein MBOL_28120 [Mycobacterium abscessus subsp.
bolletii BD]
Length = 400
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA++ LL + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 125 GRLAGFEKVNLASMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLVELRDKIA 184
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E +
Sbjct: 185 EVLAKQGKTEWARQEFE 201
>gi|212704372|ref|ZP_03312500.1| hypothetical protein DESPIG_02427 [Desulfovibrio piger ATCC 29098]
gi|212672197|gb|EEB32680.1| 3'-5' exonuclease [Desulfovibrio piger ATCC 29098]
Length = 201
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 80/205 (39%), Gaps = 49/205 (23%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLAC 61
C Y P IHLV S E ++ L Q ++G D E +P R + N P SL+QLA
Sbjct: 21 CHYEGP--IHLVRSLE--DWEKALPDLQQEQVLGFDTETRPSFRKGRVNTP--SLVQLA- 73
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPL-PSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
A V+L+ LS P P L L P ++K G D+ L+
Sbjct: 74 -------------TARAVYLVQLSWWPFGPE----LAGLLADPAVIKAGVAIGDDMRELA 116
Query: 121 STFC---SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLS 177
+ + D+G + R T+ L + L +S
Sbjct: 117 RLYPFKPAGMVDLGM--------------------VARAHQLTTQGLRTLAANLFGQRIS 156
Query: 178 KELQCSDWSNRPLTEEQKNYAAIDA 202
K QCS+WS L++ Q YAA DA
Sbjct: 157 KGPQCSNWSVMELSKRQVIYAATDA 181
>gi|190571105|ref|YP_001975463.1| 3'-5' exonuclease [Wolbachia endosymbiont of Culex quinquefasciatus
Pel]
gi|213019628|ref|ZP_03335434.1| 3'-5' exonuclease [Wolbachia endosymbiont of Culex quinquefasciatus
JHB]
gi|190357377|emb|CAQ54811.1| 3'-5' exonuclease [Wolbachia endosymbiont of Culex quinquefasciatus
Pel]
gi|212995050|gb|EEB55692.1| 3'-5' exonuclease [Wolbachia endosymbiont of Culex quinquefasciatus
JHB]
Length = 206
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ SL +C ELLDI L+K+ Q SDW N LT++QK+YAA D L +I
Sbjct: 113 DNHSLKELCLELLDIKLNKQQQSSDWGNENLTDKQKSYAASDVLYLHKI 161
>gi|151945630|gb|EDN63871.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190407342|gb|EDV10609.1| exosome complex exonuclease RRP6 [Saccharomyces cerevisiae RM11-1a]
gi|207341289|gb|EDZ69386.1| YOR001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274006|gb|EEU08922.1| Rrp6p [Saccharomyces cerevisiae JAY291]
gi|259149485|emb|CAY86289.1| Rrp6p [Saccharomyces cerevisiae EC1118]
Length = 733
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 38/211 (18%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S E + L + + +D E RS+ + V L+Q++ + E D
Sbjct: 219 STELESMLEDLKNTKEIAVDLEHHDYRSY---YGIVCLMQISTR-------ERD------ 262
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D ++ L +L E+F +P I+K+ D+I+L D+G
Sbjct: 263 -YLVD--TLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQR-------DLG------- 305
Query: 139 LDITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
L + +++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ Y
Sbjct: 306 LYVVGLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAY 361
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
A D H L+ I++ + K+ + + E
Sbjct: 362 ARADTHFLLNIYDQLRNKLIESNKLAGVLYE 392
>gi|406898744|gb|EKD42224.1| hypothetical protein ACD_73C00257G0002 [uncultured bacterium]
Length = 203
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 41/212 (19%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLAC 61
C Y ++ V +T+ E L L +VG+D E +P R+ Q + P SL+Q+A
Sbjct: 19 CRYEGA--VYFVKNTQDLERAQLE--LQNEPIVGVDTETQPAFRAGQFHLP--SLVQIA- 71
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSS 121
+ V+L L + + L EL + I+K G D + L
Sbjct: 72 -------------TSRCVYLFPLKRLDCSKV---LAELLGNSAIIKAGIGLSHDFLQLRL 115
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQ 181
F Q ++ +D+ S+ RK E + N+ L I +SK +
Sbjct: 116 HFPFQEKNV--------VDLASV---------ARKNGMEQTGVRNLAALFLGIRISKGQK 158
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
S+W LT+ Q YAA DA E++ FQ
Sbjct: 159 TSNWGRTELTQNQIIYAATDAWVCRELYLCFQ 190
>gi|427720395|ref|YP_007068389.1| 3'-5' exonuclease [Calothrix sp. PCC 7507]
gi|427352831|gb|AFY35555.1| 3'-5' exonuclease [Calothrix sp. PCC 7507]
Length = 306
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
T E H+ +++ + LD E ++S PR+SL+Q+ P + +
Sbjct: 5 TSPSEIRHIIAEYTKARTLWLDTEVA---DYKSRRPRLSLIQVLDNPQ--------DMSG 53
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRV 135
V+LLD+ P + E ++++ V+P I K+ D+ +L S C + +
Sbjct: 54 DRVYLLDVLDQP-DVVAEFVEQIMVNPLIEKVFHNASYDVKFLGSKQVKNITCTLEIAKK 112
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDIS-LSKELQCSDWSNRPLTEEQ 194
PY LP L + L D + + K+ Q SDW RPLTEEQ
Sbjct: 113 IPYY----------------LLPLPNYQLKTLATVLCDFNNIDKQEQNSDWGKRPLTEEQ 156
Query: 195 KNYAAIDAHCLIEI 208
+YA +D L ++
Sbjct: 157 IDYAYLDCIYLAQV 170
>gi|334183304|ref|NP_001185222.1| RRP6-like protein 1 [Arabidopsis thaliana]
gi|332194982|gb|AEE33103.1| RRP6-like protein 1 [Arabidopsis thaliana]
Length = 639
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+ELF P K+ +D+I+L F C++ FD Q R
Sbjct: 180 LRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNL-FDT----------------GQASR 222
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + K ++ +KE Q +DW RPL + K YA D H L+ I+++ +++
Sbjct: 223 VLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRME 282
Query: 216 V 216
+
Sbjct: 283 L 283
>gi|415722132|ref|ZP_11469020.1| ribonuclease D [Gardnerella vaginalis 00703Bmash]
gi|388060296|gb|EIK82995.1| ribonuclease D [Gardnerella vaginalis 00703Bmash]
Length = 460
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 180 VMSSELKKQG 189
>gi|330991792|ref|ZP_08315742.1| Ribonuclease D [Gluconacetobacter sp. SXCC-1]
gi|329761260|gb|EGG77754.1| Ribonuclease D [Gluconacetobacter sp. SXCC-1]
Length = 395
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
V T + E + L + V +D E+ +R++ +P + L+QLA +
Sbjct: 13 VLVTTTAELEAVTARLRREPFVTIDTEFVRERTY---WPELCLVQLAGE----------- 58
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGF 132
N VV I L S+ LL + ++K+ +QDL I+L F
Sbjct: 59 -NDVVVIDTTAPGIDLSSLGGLLDD----AGVIKVFHAARQDLEIFLHL----------F 103
Query: 133 DRVEPYLDITSIYNHL--HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
DR+ L T + + + Q+G N+ LL + + K + SDWS RPL
Sbjct: 104 DRLPAALFDTQVAAMVAGYGDQVGYD---------NLVWSLLGVQIDKSHRFSDWSVRPL 154
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSN 233
+ Q YAA D L +++ ++ ++G +ELD N
Sbjct: 155 SAAQIGYAAADVTYLRQVYGQLLAQLEKEGRLDWVAAELDVLN 197
>gi|145336746|ref|NP_175846.3| RRP6-like protein 1 [Arabidopsis thaliana]
gi|110741918|dbj|BAE98900.1| hypothetical protein [Arabidopsis thaliana]
gi|160892399|gb|ABX52079.1| RRP6-like protein 1 [Arabidopsis thaliana]
gi|332194981|gb|AEE33102.1| RRP6-like protein 1 [Arabidopsis thaliana]
Length = 637
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+ELF P K+ +D+I+L F C++ FD Q R
Sbjct: 180 LRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNL-FDT----------------GQASR 222
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + K ++ +KE Q +DW RPL + K YA D H L+ I+++ +++
Sbjct: 223 VLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRME 282
Query: 216 V 216
+
Sbjct: 283 L 283
>gi|213510932|ref|NP_001133834.1| Exosome component 10 [Salmo salar]
gi|209155512|gb|ACI33988.1| Exosome component 10 [Salmo salar]
Length = 885
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 19/150 (12%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L D+G
Sbjct: 337 FIID--TLELRSELYILNEAFTDPAIVKVFHGADSDIEWLQK-------DLGL------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I N Q R L SL ++ K ++ K Q +DW RPL +E YA
Sbjct: 381 ---YIVNMFDTHQASRTLNLGRHSLDHLLKLFCNVDSDKRYQLADWRIRPLPDEMFQYAR 437
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSISEL 229
D H L+ +++ +V + + GN ++ ++
Sbjct: 438 ADTHYLLYVYDRLRVDLWEVGNGQPALLQM 467
>gi|367047893|ref|XP_003654326.1| hypothetical protein THITE_2117244 [Thielavia terrestris NRRL 8126]
gi|347001589|gb|AEO67990.1| hypothetical protein THITE_2117244 [Thielavia terrestris NRRL 8126]
Length = 882
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E+L E+F P I+K+ D+I+L D+G L + +++
Sbjct: 284 VPWRHKLEVLNEVFADPRIVKVLHGAFMDIIWLQR-------DLG-------LYVVGLFD 329
Query: 147 HLHH-KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
+ LG +SLA + K+ D K+ Q +DW RPL +E YA D H L
Sbjct: 330 TYYACDALGYA----GRSLAFLLKKFADFDADKKYQLADWRIRPLPDEMFYYARSDTHYL 385
Query: 206 IEIFNIFQVKVAQ 218
+ I+++ + ++A+
Sbjct: 386 LYIYDMLRNELAE 398
>gi|170596587|ref|XP_001902821.1| 3'-5' exonuclease family protein [Brugia malayi]
gi|158589271|gb|EDP28335.1| 3'-5' exonuclease family protein [Brugia malayi]
Length = 704
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 157 LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L KE + L+ +C+ +L L K QCS W RPL + Q YAA+DA+C++ ++
Sbjct: 617 LLKEIRGLSALCERVLGKPLDKTEQCSVWDRRPLRDLQLRYAALDAYCMLMLY 669
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 22/90 (24%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLA--CQPGPRFNPESDESNASVVFLLDLSSIPLPSI 92
VG+DAEW S ++ + ++LQLA C +F++D+ I +
Sbjct: 439 VGVDAEW----SSYVSYSKATILQLAIPCH----------------IFIIDVDEIKADIL 478
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSST 122
++LFV +LK+G++F +DLI L S
Sbjct: 479 VNFFEKLFVEWKLLKIGYQFDEDLIQLRSA 508
>gi|432887992|ref|XP_004075013.1| PREDICTED: probable exonuclease mut-7 homolog [Oryzias latipes]
Length = 762
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 22/128 (17%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D YR PL ++H V + E+ + + L + +VG+D EW+P S +V+L+Q
Sbjct: 427 DKFYRVPLTKDQVHFVNTPEALQKCG-STLLKKGGVVGVDMEWQPTFGCTSA-QQVALIQ 484
Query: 59 LACQPGPRFNPESDESNASVVFLLDLSSIPL---PSIWELLKELFVSPDILKLGFKFKQD 115
LA Q VFLLDL + P ++ F PDILKLG+ D
Sbjct: 485 LAVQ--------------DQVFLLDLCAREFCQHPGTVRFIRTFFSDPDILKLGYGMSGD 530
Query: 116 LIYLSSTF 123
L L +T+
Sbjct: 531 LKSLRATW 538
>gi|4585987|gb|AAD25623.1|AC005287_25 Similar to nucleolar protein [Arabidopsis thaliana]
Length = 642
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+ELF P K+ +D+I+L F C++ FD Q R
Sbjct: 180 LRELFKDPKKKKVIHGADRDIIWLQRDFGIYVCNL-FD----------------TGQASR 222
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL + K ++ +KE Q +DW RPL + K YA D H L+ I+++ +++
Sbjct: 223 VLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAREDTHYLLYIYDVMRME 282
Query: 216 V 216
+
Sbjct: 283 L 283
>gi|323335702|gb|EGA76985.1| Rrp6p [Saccharomyces cerevisiae Vin13]
Length = 733
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 38/201 (18%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S E + L + + +D E RS+ + V L+Q++ + E D
Sbjct: 219 STELESMLEDLKNTKEIAVDLEHHDYRSY---YGIVCLMQISTR-------ERD------ 262
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D ++ L +L E+F +P I+K+ D+I+L D+G
Sbjct: 263 -YLVD--TLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQR-------DLG------- 305
Query: 139 LDITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
L + +++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ Y
Sbjct: 306 LYVVGLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAY 361
Query: 198 AAIDAHCLIEIFNIFQVKVAQ 218
A D H L+ I++ + K+ +
Sbjct: 362 ARADTHFLLNIYDQLRNKLIE 382
>gi|349581166|dbj|GAA26324.1| K7_Rrp6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 733
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 38/201 (18%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S E + L + + +D E RS+ + V L+Q++ + E D
Sbjct: 219 STELESMLEDLKNTKEIAVDLEHHDYRSY---YGIVCLMQISTR-------ERD------ 262
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D ++ L +L E+F +P I+K+ D+I+L D+G
Sbjct: 263 -YLVD--TLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQR-------DLG------- 305
Query: 139 LDITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
L + +++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ Y
Sbjct: 306 LYVVGLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAY 361
Query: 198 AAIDAHCLIEIFNIFQVKVAQ 218
A D H L+ I++ + K+ +
Sbjct: 362 ARADTHFLLNIYDQLRNKLIE 382
>gi|312139461|ref|YP_004006797.1| rnase d [Rhodococcus equi 103S]
gi|311888800|emb|CBH48112.1| putative RNase D [Rhodococcus equi 103S]
Length = 445
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+
Sbjct: 157 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSTRPLPDAWLNYAALDVEVLLELREAMA 216
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++A +G + + E + L
Sbjct: 217 TELAAQGKTEWAAQEFEHVRL 237
>gi|148272845|ref|YP_001222406.1| putative ribonuclease D [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830775|emb|CAN01715.1| putative ribonuclease D [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 496
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 139 LDITSIYN-HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
LD I++ L + LG LP+ L + +ELL I L+KE +DWS RPL Y
Sbjct: 193 LDPQRIFDTELASRLLG--LPR--VGLGTVVEELLGIHLAKEHSAADWSTRPLPRAWLVY 248
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS 232
AA+D L+++ + ++ ++G + + E ++
Sbjct: 249 AALDVELLVDVRDEIARRLEEQGKTGIAEQEFAAT 283
>gi|422902307|gb|AFX83745.1| DNA polymerase [uncultured Mediterranean phage MEDS1 group]
Length = 614
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI-GFDRVEPYLDITSIYNHLH 149
S W L+E F S + L D+ +L QG I GF R + +
Sbjct: 68 SDWNYLEEFFSSTNRFWLAHNAVFDIAWLQE----QGIHINGFVRC----------SMIA 113
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ L +P+ L + K L+I +SKE Q S+W L++EQ YAA D L+E+
Sbjct: 114 SRLLTNGIPQTKHGLDALAKRQLNIEVSKEQQKSNWGLETLSKEQLTYAAKDIEILLELD 173
Query: 210 NIFQVKV 216
N+ K+
Sbjct: 174 NVLDQKI 180
>gi|325090671|gb|EGC43981.1| 3'-5' exonuclease/helicase [Ajellomyces capsulatus H88]
Length = 935
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 30/189 (15%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGP 65
K + +H TS ++ E +A+ ++VGLD EWK Q S Q + VS++QLA
Sbjct: 741 KEITVHYCTSLQTME--RVAKLFLSETIVGLDVEWKAQASAQDSLVGNVSVIQLA----- 793
Query: 66 RFNPESDESNASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSS 121
S E A +F L L + P S+ L LK + SPDI+K+G + D
Sbjct: 794 -----SKERIA--IFHLALFN-PANSLQHLLSPTLKRILESPDIVKVGVAIRAD------ 839
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--E 179
C++ R +++ ++ + H + + K +LA +E L + L K E
Sbjct: 840 --CTRLYKFLGIRTNNICEVSRLHKVVKHHLNPKLIDKRLVNLAQQVEEHLGLPLDKDPE 897
Query: 180 LQCSDWSNR 188
++C WS +
Sbjct: 898 IRCGGWSKK 906
>gi|25028351|ref|NP_738405.1| hypothetical protein CE1795 [Corynebacterium efficiens YS-314]
gi|23493636|dbj|BAC18605.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 413
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + +++ D+ L K DWS RPL EE NYAA+D L+E+ ++
Sbjct: 124 GRLAGFELVNLAAMVEQIFDLHLLKGHGAEDWSKRPLPEEWLNYAALDVEMLLELADVMA 183
Query: 214 VKVAQKG 220
+ +G
Sbjct: 184 EILDNQG 190
>gi|406883317|gb|EKD30934.1| hypothetical protein ACD_77C00446G0004 [uncultured bacterium]
Length = 200
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 38/176 (21%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L ++G D E KP S V+LLQL+ GP D++ F+ L+S+
Sbjct: 41 LGNHKIIGFDTETKPVFQANSKRNGVALLQLS---GP------DKA-----FIFRLTSLG 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDL--IYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E L E+ + I+K+G +DL + + F +G ++D+
Sbjct: 87 MP---ESLCEILSTKKIIKVGAAVNEDLRGLLRYTAFVPKG----------FVDL----- 128
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+ +G KS+ + +L + +SK Q S+W L+ Q NYAAIDA
Sbjct: 129 ----QHVGMNWGISEKSVRKMAAIILGVRVSKSQQLSNWEADELSPGQINYAAIDA 180
>gi|294940026|ref|XP_002782641.1| hypothetical protein Pmar_PMAR021190 [Perkinsus marinus ATCC 50983]
gi|239894493|gb|EER14436.1| hypothetical protein Pmar_PMAR021190 [Perkinsus marinus ATCC 50983]
Length = 1103
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 53/190 (27%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E R +SQ +G+D EW S+ P +L Q+A + V+
Sbjct: 946 ELDDCVRDISQYRTIGIDVEW-------SSGPGAALFQVASE--------------DTVY 984
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILK--LGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
L+D+ +P I + LF + ++ LGF DL + D+ D+
Sbjct: 985 LIDML---VPEIRQS-STLFSTLRRVRRVLGFSISADLERIPQLKECGVIDVQVDKR--- 1037
Query: 139 LDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
S+ H+ QLG L K QCS+W++RPL+E QKNYA
Sbjct: 1038 ---GSLQRHVA-GQLGAYLDKTE-------------------QCSEWADRPLSESQKNYA 1074
Query: 199 AIDAHCLIEI 208
A+DA+ L+ +
Sbjct: 1075 ALDAYTLLAL 1084
>gi|218129756|ref|ZP_03458560.1| hypothetical protein BACEGG_01335 [Bacteroides eggerthii DSM 20697]
gi|217987866|gb|EEC54191.1| 3'-5' exonuclease [Bacteroides eggerthii DSM 20697]
Length = 210
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P +IH++ + + E L + ++G+D+E +P + + +V+LLQ++ +
Sbjct: 21 PGQIHVIQTPQEAE--RAVAYLKKCPILGIDSETRPSFTKGQSH-KVALLQVSSE----- 72
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCS 125
+F L+L+ + LP I L +P I K+G + D + L + F
Sbjct: 73 -------EHCFLFRLNLTGLTLPIIM-----LLENPGITKVGLSLRDDFMMLHKRAPFEQ 120
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
+ C + ++ R + +SL I L +SK + S+W
Sbjct: 121 RAC-------------------VELQEYVRTFGIQDRSLQKIYAILFGEKISKSQRLSNW 161
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
LT Q+ YAA DA + I+N Q
Sbjct: 162 EAEMLTPSQQQYAATDAWACLNIYNRLQ 189
>gi|392416035|ref|YP_006452640.1| ribonuclease D [Mycobacterium chubuense NBB4]
gi|390615811|gb|AFM16961.1| ribonuclease D [Mycobacterium chubuense NBB4]
Length = 435
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
TS+Y+ + GR + +LA + + LL + L+K +DWS RPL + NYAA+D
Sbjct: 145 TSLYDT---ELAGRLANYDRVNLAAMVQRLLGLQLTKGHGAADWSKRPLPHDWLNYAALD 201
Query: 202 AHCLIEIFNIFQVKVAQKGNS 222
L E+ + +A++G +
Sbjct: 202 VEVLAELRDAIDAVLAEQGKT 222
>gi|259507406|ref|ZP_05750306.1| ribonuclease D [Corynebacterium efficiens YS-314]
gi|259165031|gb|EEW49585.1| ribonuclease D [Corynebacterium efficiens YS-314]
Length = 407
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + +++ D+ L K DWS RPL EE NYAA+D L+E+ ++
Sbjct: 118 GRLAGFELVNLAAMVEQIFDLHLLKGHGAEDWSKRPLPEEWLNYAALDVEMLLELADVMA 177
Query: 214 VKVAQKG 220
+ +G
Sbjct: 178 EILDNQG 184
>gi|302674116|ref|XP_003026743.1| hypothetical protein SCHCODRAFT_238450 [Schizophyllum commune H4-8]
gi|300100427|gb|EFI91840.1| hypothetical protein SCHCODRAFT_238450 [Schizophyllum commune H4-8]
Length = 297
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 24/136 (17%)
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFC---SQGCDIG--FDRV 135
LL L+ +P L E+ P+I+K+G + K D I L F G +I + +
Sbjct: 100 LLVLAGVP-----ARLIEMLRDPNIIKVGVELKGDSILLLRHFAVPVHNGWEISQLWKSM 154
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQK 195
P +++ + H+ SL ++ + +L + + K Q SDWS L+ EQ
Sbjct: 155 HPSIEVAPLTTHI--------------SLDDMARIVLGVKVDKLQQTSDWSAPALSVEQI 200
Query: 196 NYAAIDAHCLIEIFNI 211
Y+ +DA+ L+ I ++
Sbjct: 201 EYSYLDAYILVPIMHV 216
>gi|301774745|ref|XP_002922791.1| PREDICTED: exosome component 10-like isoform 1 [Ailuropoda
melanoleuca]
Length = 885
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L D G
Sbjct: 361 FIID--TLELRSEMYILNESLTDPSIVKVFHGADSDIEWLQK-------DFGL------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 405 ---YVVNMFDTHQAARLLNLGRHSLDHLLKLYCGVESNKQYQLADWRIRPLPEEMLNYAR 461
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 462 DDTHYLLYIYDKMRLELWERGN 483
>gi|392296333|gb|EIW07435.1| Rrp6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 733
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 38/201 (18%)
Query: 19 SPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASV 78
S E + L + + +D E RS+ + V L+Q++ + E D
Sbjct: 219 STELESMLEDLKNTKEIAVDLEHHDYRSY---YGIVCLMQISTR-------ERD------ 262
Query: 79 VFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
+L+D ++ L +L E+F +P I+K+ D+I+L D+G
Sbjct: 263 -YLVD--TLKLRENLHILNEVFTNPSIVKVFHGAFMDIIWLQR-------DLG------- 305
Query: 139 LDITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
L + +++ H K +G LP+ SLA + + + SK+ Q +DW RPL++ Y
Sbjct: 306 LYVVGLFDTYHASKAIG--LPRH--SLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAY 361
Query: 198 AAIDAHCLIEIFNIFQVKVAQ 218
A D H L+ I++ + K+ +
Sbjct: 362 ARADTHFLLNIYDQLRNKLIE 382
>gi|354502292|ref|XP_003513221.1| PREDICTED: exosome component 10 isoform 2 [Cricetulus griseus]
Length = 860
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F+LD ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FILD--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ + + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDRMRLELWERGN 460
>gi|421857091|ref|ZP_16289446.1| ribonuclease D [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403187430|dbj|GAB75647.1| ribonuclease D [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 380
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 24/147 (16%)
Query: 76 ASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRV 135
A +FLLD +++ L + W K ++ +Q++ + CS+ D+ +
Sbjct: 48 AEQIFLLDGTTLDLTAFW-------------KKVYRAQQNIFHA----CSEDIDLIYHYA 90
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKE--TKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
PY ++++++ Q+G + S N K +LDI + K+ SDW RPLT+E
Sbjct: 91 GPY-SLSNVFD----TQVGLSFLGQGLQVSYQNALKLVLDIDIEKDQTRSDWLARPLTDE 145
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKG 220
Q +YAA D L ++ + ++ QK
Sbjct: 146 QLHYAANDVLYLGQLAEQIKTELKQKN 172
>gi|448519311|ref|XP_003868060.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis
Co 90-125]
gi|380352399|emb|CCG22625.1| Rrp6 nuclear exosome exonuclease component [Candida orthopsilosis]
Length = 814
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Query: 22 FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFL 81
+ + LSQSS + +D E RS+ + V L+Q++ N E D ++V
Sbjct: 281 LNEMIKELSQSSEIAVDLEHHDYRSY---YGIVCLMQIS-------NREKDWIIDTLVLR 330
Query: 82 LDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDI 141
DLS+ L ++F P I+K+ D+I+L D+G L I
Sbjct: 331 GDLSA---------LNKIFTDPKIIKVLHGAFMDIIWLQR-------DLG-------LYI 367
Query: 142 TSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
S+++ H R+L SL + SK+ Q +DW RPL + YA D
Sbjct: 368 VSLFDTYH---ASRQLGFSKFSLQYLLDTFAHFRTSKKYQLADWRIRPLPKPMLAYARSD 424
Query: 202 AHCLIEIFNIFQVKV 216
H L+ IF+ + K+
Sbjct: 425 THFLLYIFDQLRNKL 439
>gi|17531757|ref|NP_496283.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|3874231|emb|CAA90108.1| Protein CRN-3, isoform a [Caenorhabditis elegans]
gi|31747255|gb|AAP57299.1| cell death-related nuclease 3 [Caenorhabditis elegans]
Length = 876
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 28/169 (16%)
Query: 80 FLLDLSSIPLPSIWE---LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
F++D P P IW+ +L E F +P ILK+ D+++L + ++ FD
Sbjct: 328 FIID----PFP-IWDHVGMLNEPFANPRILKVFHGSDSDVLWLQRDYGVHVVNL-FD--- 378
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ K+L K PK SLA + D+ L K+ Q +DW RPL N
Sbjct: 379 ---------TYVAMKKL--KYPK--FSLAYLTLRFADVVLDKQYQLADWRARPLRNAMIN 425
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKP 245
YA D H L+ +++ + ++ ++ ++ + S + DL +K + +KP
Sbjct: 426 YAREDTHYLLYSYDMLREQLLKQ--DTKDLANVYSESSDLCIK-VYKKP 471
>gi|406606562|emb|CCH42061.1| exosome complex exonuclease [Wickerhamomyces ciferrii]
Length = 744
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 19/118 (16%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQ 152
++L +F P I K+ D+I+L D+G L I S+++ H +Q
Sbjct: 279 KILNSVFTDPKITKVFHGAFMDIIWLQR-------DLG-------LYIVSLFDTYHASRQ 324
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
LG PK SLA + + SK+ Q +DW RPLT K YA D H L+ IF+
Sbjct: 325 LG--FPKH--SLAYLLERFAHFKTSKKYQLADWRIRPLTGPMKLYARSDTHFLLNIFD 378
>gi|255086371|ref|XP_002509152.1| predicted protein [Micromonas sp. RCC299]
gi|226524430|gb|ACO70410.1| predicted protein [Micromonas sp. RCC299]
Length = 1227
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
L+++C+ LL L K +C DWS RPLTE Q Y A DA L+ I
Sbjct: 628 LSSVCQALLGQPLDKRERCGDWSRRPLTESQVAYGAQDARVLLRI 672
>gi|406896263|gb|EKD40613.1| 3'-5' exonuclease [uncultured bacterium]
Length = 289
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQ 62
C R+ + V T+ E + +AL+ +++G D E +P H+ SLLQLA +
Sbjct: 107 CPIRRWEGVVRVVRTKE-ELSQAIQALATETILGFDTETRPA-YHKGESYLPSLLQLAGE 164
Query: 63 PGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST 122
V+L L + LP+ L+E+ P ++K G DL L
Sbjct: 165 --------------KEVYLFQLRHLGLPAP---LREILADPKVVKAGVALAYDLQELHK- 206
Query: 123 FCSQGCDIGFDRVEP--YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
R +P ++D+ + L +K + L + LL ++K
Sbjct: 207 ---------LARFKPAGFVDLGT---------LAKKAEIKNHGLRGLAAVLLGFRIAKGA 248
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
Q S+W+ L Q YAA DA E++
Sbjct: 249 QTSNWARDVLAPAQIQYAATDAWVGRELY 277
>gi|359773330|ref|ZP_09276728.1| putative ribonuclease, partial [Gordonia effusa NBRC 100432]
gi|359309527|dbj|GAB19506.1| putative ribonuclease, partial [Gordonia effusa NBRC 100432]
Length = 427
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + L + L+K +DWS RPL + NYAA+D L+E+
Sbjct: 143 GRLLGLPRVNLAAMIAHFLGLGLAKGHGAADWSRRPLPADWLNYAALDVEVLVELREAIA 202
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFK 255
++A G S + E D +L +P +T R++
Sbjct: 203 DELAATGKSDWAAQEFDY---------VLHRPPSPPRTDRWR 235
>gi|308502918|ref|XP_003113643.1| hypothetical protein CRE_26057 [Caenorhabditis remanei]
gi|308263602|gb|EFP07555.1| hypothetical protein CRE_26057 [Caenorhabditis remanei]
Length = 752
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K L+ IC++LL L K QCS W RPL Q YAA+DA+C++ +++
Sbjct: 668 NKGLSYICEKLLGRPLDKTEQCSVWDRRPLRHLQLRYAAMDAYCMLMLYD 717
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 20/91 (21%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL-PSIW 93
VG+DAEW S R ++LQ+A +++DL S + P +
Sbjct: 493 VGVDAEWSAYVSPS----RATILQMAL--------------YDCTYIIDLESAAISPDTY 534
Query: 94 EL-LKELFVSPDILKLGFKFKQDLIYLSSTF 123
L L LF +P+I+K+GF+F +DL L + F
Sbjct: 535 NLVLSYLFYTPEIVKIGFQFNEDLHQLRAAF 565
>gi|325672651|ref|ZP_08152347.1| ribonuclease III [Rhodococcus equi ATCC 33707]
gi|325556528|gb|EGD26194.1| ribonuclease III [Rhodococcus equi ATCC 33707]
Length = 413
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+
Sbjct: 125 GRLAGFERVGLAAIVERTLGLELRKGHGAADWSTRPLPDAWLNYAALDVEVLLELREAMA 184
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++A +G + + E + L
Sbjct: 185 TELAAQGKTEWAAQEFEHVRL 205
>gi|353328057|ref|ZP_08970384.1| 3'-5' exonuclease [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 206
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ SL +C ELLDI L+K+ Q SDW N LT++QK+YAA D L +I
Sbjct: 113 DNHSLKELCLELLDIKLNKQQQSSDWGNEILTDKQKSYAASDVLYLHKI 161
>gi|399524453|ref|ZP_10764999.1| 3'-5' exonuclease [Atopobium sp. ICM58]
gi|398374379|gb|EJN52034.1| 3'-5' exonuclease [Atopobium sp. ICM58]
Length = 414
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + +++L + L K+ Q SDWS RPL +E YAA+D L E++ ++ Q
Sbjct: 136 ERFGLAAVAEQVLGLGLVKDHQASDWSVRPLPKEWLRYAALDVELLTELYYRLSRRLDQM 195
Query: 220 GN 221
G
Sbjct: 196 GR 197
>gi|381168515|ref|ZP_09877709.1| putative 3'-5' exonuclease family protein [Phaeospirillum
molischianum DSM 120]
gi|380682375|emb|CCG42527.1| putative 3'-5' exonuclease family protein [Phaeospirillum
molischianum DSM 120]
Length = 203
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L LF P + KL + DL + F R +P T I + L R
Sbjct: 63 LTRLFADPGVTKLFHFARFDLAMIRRHFGV--------RCQPVY-CTKIASRLTRTNTDR 113
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L ++C+EL + +SK+ QCSDW L+EEQ YAA D L +++
Sbjct: 114 H------GLKDLCRELAGVEMSKQQQCSDWGAATLSEEQIAYAASDVLYLHQLWARLDEL 167
Query: 216 VAQKGNS 222
+A++G +
Sbjct: 168 LAREGRT 174
>gi|255319565|ref|ZP_05360778.1| ribonuclease D, processes tRNA [Acinetobacter radioresistens SK82]
gi|262379863|ref|ZP_06073019.1| ribonuclease D [Acinetobacter radioresistens SH164]
gi|255303363|gb|EET82567.1| ribonuclease D, processes tRNA [Acinetobacter radioresistens SK82]
gi|262299320|gb|EEY87233.1| ribonuclease D [Acinetobacter radioresistens SH164]
Length = 380
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 24/147 (16%)
Query: 76 ASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRV 135
A +FLLD +++ L + W K ++ +Q++ + CS+ D+ +
Sbjct: 48 AEQIFLLDGTTLDLTAFW-------------KKVYRAQQNIFHA----CSEDIDLIYHYA 90
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKE--TKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
PY ++++++ Q+G + S N K +LDI + K+ SDW RPLT+E
Sbjct: 91 GPY-SLSNVFD----TQVGLSFLGQGLQVSYQNALKLVLDIDIEKDQTRSDWLARPLTDE 145
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKG 220
Q +YAA D L ++ + ++ QK
Sbjct: 146 QLHYAANDVLYLGQLAEQIKTELKQKN 172
>gi|449499575|ref|XP_002193489.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Taeniopygia guttata]
Length = 1497
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ ++LS + VG D EW P + + + +++Q+ E + + +
Sbjct: 146 IRQSLSDGAAVGFDIEWPPAYT-KGRMAKTAVIQMCV----------TEDKCYLFHVSSM 194
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
+ P + LK L I K+G + D L S F +I +++ ++++ +
Sbjct: 195 AGFP-----KGLKRLLEDETIKKVGVGIEGDQWKLMSDF-----EI---KLKSFVELADV 241
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAID 201
N KL KET SL + K L L K+ ++CS+W PL EEQK YAA D
Sbjct: 242 ANE--------KLKCKETWSLNGLVKHLFGRQLLKDQSVRCSNWEQFPLNEEQKLYAATD 293
Query: 202 AH 203
A+
Sbjct: 294 AY 295
>gi|441500572|ref|ZP_20982729.1| 3'- 5' exonuclease domain protein [Fulvivirga imtechensis AK7]
gi|441435723|gb|ELR69110.1| 3'- 5' exonuclease domain protein [Fulvivirga imtechensis AK7]
Length = 196
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 43/209 (20%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQP 63
YR +I ++T E + + + ++ VG D E KP + Q N VSL+Q+A +
Sbjct: 17 YRYEGRIKIITKPE--QIPGILKKIAGEKAVGFDTETKPAFKKGQVN--EVSLVQIATEK 72
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--S 121
V+L+ ++ L EL++ LK+G + DLI L +
Sbjct: 73 E--------------VYLIRINFTGLTK--ELIR-FLEDEKHLKIGVALRDDLIDLKKLT 115
Query: 122 TFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQ 181
F QG + +L + + E+ L + +L +SK Q
Sbjct: 116 HFHPQGF-------------------IELNKLVKGIGIESNGLRKLTAIILGFRISKSAQ 156
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
S+W + LTE+Q NYAA DA ++++N
Sbjct: 157 ISNWESEMLTEKQVNYAATDAWVCLKMYN 185
>gi|31793853|ref|NP_856346.1| hypothetical protein Mb2700 [Mycobacterium bovis AF2122/97]
gi|121638556|ref|YP_978780.1| hypothetical protein BCG_2694 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991048|ref|YP_002645737.1| hypothetical alanine rich protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|378772411|ref|YP_005172144.1| hypothetical protein BCGMEX_2687 [Mycobacterium bovis BCG str.
Mexico]
gi|449064748|ref|YP_007431831.1| conserved alanine rich protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|31619447|emb|CAD94885.1| CONSERVED HYPOTHETICAL ALANINE RICH PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121494204|emb|CAL72682.1| Conserved hypothetical alanine rich protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774163|dbj|BAH26969.1| hypothetical alanine rich protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|341602594|emb|CCC65270.1| conserved hypothetical alanine rich protein [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|356594732|gb|AET19961.1| putative alanine rich protein [Mycobacterium bovis BCG str. Mexico]
gi|449033256|gb|AGE68683.1| conserved alanine rich protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 438
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ + +A++G +
Sbjct: 148 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAVISRVLAEQGKT 207
Query: 223 CSSISELD 230
+ E +
Sbjct: 208 DWAAQEFE 215
>gi|156089519|ref|XP_001612166.1| 3'-5' exonuclease domain containing protein [Babesia bovis]
gi|154799420|gb|EDO08598.1| 3'-5' exonuclease domain containing protein [Babesia bovis]
Length = 230
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 40/206 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRS---HQSNFPRV--SLLQLACQPG 64
+I L+ S + + A AL + VG D E+ P H+ +F R +++Q+A
Sbjct: 34 RIVLIDSENAEHYQDSAAALLSTKCVGFDLEYVPDYYASIHRQSFDRTRPAVIQIA---- 89
Query: 65 PRFNPESDESNASVVFLL-DLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
++ +V+L+ + +P S+ +L + PDILK+ D+ + F
Sbjct: 90 --------SNDICLVYLMYKIGHLP-SSVSHILSD----PDILKISHGAPSDMRLMYRHF 136
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
R ++D+ S+ L + SL ++ + +L + LSK+ QCS
Sbjct: 137 GV--------RSRSFVDLQSVCEELQLRPC---------SLKSVVQRVLGLRLSKKQQCS 179
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIF 209
+W L+++Q YAA DA + F
Sbjct: 180 NWEAAELSQQQIKYAATDAWVTLAAF 205
>gi|421465118|ref|ZP_15913806.1| putative ribonuclease D [Acinetobacter radioresistens WC-A-157]
gi|400204380|gb|EJO35364.1| putative ribonuclease D [Acinetobacter radioresistens WC-A-157]
Length = 380
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 24/147 (16%)
Query: 76 ASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRV 135
A +FLLD +++ L + W K ++ +Q++ + CS+ D+ +
Sbjct: 48 AEQIFLLDGTTLDLTAFW-------------KKVYRAQQNIFHA----CSEDIDLIYHYA 90
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKE--TKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
PY ++++++ Q+G + S N K +LDI + K+ SDW RPLT+E
Sbjct: 91 GPY-SLSNVFD----TQVGLSFLGQGLQVSYQNALKLVLDIDIEKDQTRSDWLARPLTDE 145
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKG 220
Q +YAA D L ++ + ++ QK
Sbjct: 146 QLHYAANDVLYLGQLAEQIKTELKQKN 172
>gi|354502290|ref|XP_003513220.1| PREDICTED: exosome component 10 isoform 1 [Cricetulus griseus]
Length = 885
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F+LD ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FILD--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ + + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDRMRLELWERGN 460
>gi|255953481|ref|XP_002567493.1| Pc21g04470 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589204|emb|CAP95344.1| Pc21g04470 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1240
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 52/227 (22%)
Query: 7 KPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSH----QSNFP--------RV 54
+ L +H S +S E + S ++G D EWK Q S QSN R+
Sbjct: 1012 RKLIVHYCRSRQSTE--EAVQHFLGSKVIGFDMEWKAQASSLDSIQSNVSVIQIANEERI 1069
Query: 55 SLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQ 114
+L Q+A F P L DL S PS LK L SPD+ K+G K
Sbjct: 1070 ALFQIAL-----FKPARS--------LEDLVS---PS----LKRLVESPDVTKVGVSIKA 1109
Query: 115 DLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP----KETKSLANICKE 170
D L +G D + +++ +Y + + G+ P K +L+ E
Sbjct: 1110 DCTRLRKY-------LGID-AKATFELSHLYKLV---KYGKDNPNLVNKRGVNLSEQINE 1158
Query: 171 LLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+ L K +++C DW+ R L+ Q YAA D + + +F+ + K
Sbjct: 1159 HFGLPLEKSDDVRCGDWT-RALSYRQVQYAATDPYACVRLFHAMEAK 1204
>gi|431906334|gb|ELK10531.1| Exosome component 10 [Pteropus alecto]
Length = 883
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 332 FIVD--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 374
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 375 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLADWRIRPLPEEMLNYAR 432
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 433 DDTHYLLYIYDKMRLELWERGN 454
>gi|385801844|ref|YP_005838247.1| 3'-5' exonuclease [Gardnerella vaginalis HMP9231]
gi|333393505|gb|AEF31423.1| 3'-5' exonuclease [Gardnerella vaginalis HMP9231]
Length = 457
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 180 VMSGELKKQG 189
>gi|197116637|ref|YP_002137064.1| ribonuclease D [Geobacter bemidjiensis Bem]
gi|197085997|gb|ACH37268.1| ribonuclease D, putative [Geobacter bemidjiensis Bem]
Length = 377
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 41/214 (19%)
Query: 8 PLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
P HLVT ++ L LS+ S++ D E + +V L+Q++ R
Sbjct: 10 PAAAHLVTDQKT--LDELVERLSRESVLAFDLEADSLHHYTE---KVCLIQVSSTSEDR- 63
Query: 68 NPESDESNASVVFLLDLSSIPLPSI-WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ 126
L+D PL I ++L +F +P I K+ D+ L F
Sbjct: 64 -------------LID----PLAPIDVKVLAPIFANPAIKKIFHGADYDMRSLYRDFG-- 104
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
+++ ++++ + Q L + LA + K+ + L K Q +DWS
Sbjct: 105 ------------IEVVNLFDTMIASQF---LGESEFGLAALLKKRFGVELDKRYQKADWS 149
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
RP ++E +YA D LIE++ + ++ QKG
Sbjct: 150 KRPFSQEMLDYAMKDTSLLIELYRQLEAELKQKG 183
>gi|172054918|ref|YP_001806245.1| DNA polymerase I-like protein [Cyanothece sp. ATCC 51142]
gi|354555333|ref|ZP_08974635.1| DNA-directed DNA polymerase [Cyanothece sp. ATCC 51472]
gi|171701199|gb|ACB54179.1| DNA polymerase I-like protein [Cyanothece sp. ATCC 51142]
gi|353552924|gb|EHC22318.1| DNA-directed DNA polymerase [Cyanothece sp. ATCC 51472]
Length = 662
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
+ L ++VGLD E H S +SL+Q+A P V L++
Sbjct: 61 KELETHTVVGLDIETTGLDPHTS---EISLIQIAAPNRP-------------VILIEFRG 104
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--------------STFCSQGCDIGF 132
I + E L+ P I K+G ++ +L+ + SQ G
Sbjct: 105 I---TNKETLRRFIEHPKIPKVGHNLAFEIQFLTKHLGINPAKTAWIDTMLMSQLLAAGL 161
Query: 133 ---------DRVEPYLDIT-SIYNHLHHKQ-LGRKLPKETKSLANICKELLDISLSKELQ 181
V P D+T SI N KQ L R LP + SL + L SL K LQ
Sbjct: 162 PPTLEEDAKTGVLPIPDLTRSIKNKKKLKQELNRNLPG-SYSLMRVVARELGYSLDKSLQ 220
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKV 216
SDW +PLT+EQ YAA DA ++ + + K+
Sbjct: 221 VSDWG-KPLTQEQLQYAANDAAVVLPLREALRNKI 254
>gi|196232584|ref|ZP_03131436.1| 3'-5' exonuclease [Chthoniobacter flavus Ellin428]
gi|196223346|gb|EDY17864.1| 3'-5' exonuclease [Chthoniobacter flavus Ellin428]
Length = 352
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
E SLA + K D++L+K Q ++W+ RPL+ + +YA D H L+EI I + ++ +
Sbjct: 110 EEFSLAALIKRYFDVALTKASQKANWARRPLSPQMADYAVKDTHYLLEIAGILEAELTR 168
>gi|415702783|ref|ZP_11458929.1| ribonuclease D [Gardnerella vaginalis 284V]
gi|388053329|gb|EIK76320.1| ribonuclease D [Gardnerella vaginalis 284V]
Length = 457
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 124 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 179
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 180 VMSGELKKQG 189
>gi|327308500|ref|XP_003238941.1| exosome component 3'-5' exonuclease [Trichophyton rubrum CBS
118892]
gi|326459197|gb|EGD84650.1| exosome complex exonuclease Rrp6 [Trichophyton rubrum CBS 118892]
Length = 867
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+I+L D+G L + +++ H
Sbjct: 306 QVLNEVFADPSIIKVLHGSSMDVIWLQR-------DLG-------LYLVGLFDTFHAAS- 350
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+LPK KSL + E + K+ Q +DW RPL +YA D H L+ IF+ +
Sbjct: 351 ALQLPK--KSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFDRLR 408
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILE 243
++ + + SS E S L G + +E
Sbjct: 409 NQLLE--SPSSSPEEKQESGLGGGGREAIE 436
>gi|290989778|ref|XP_002677514.1| predicted protein [Naegleria gruberi]
gi|284091122|gb|EFC44770.1| predicted protein [Naegleria gruberi]
Length = 335
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 337 DIGDWQGPPPWDLSLG----GDGYPKFLCDVMVEGLAKHLRCVGIDA 379
DI + GP D SL DG PKF+CD + G+AKHLR +GID
Sbjct: 77 DIENVNGPNNLDYSLDEVPVDDGEPKFVCDTTIPGVAKHLRMLGIDT 123
>gi|396585245|ref|ZP_10485670.1| 3'-5' exonuclease [Actinomyces sp. ICM47]
gi|395546974|gb|EJG14494.1| 3'-5' exonuclease [Actinomyces sp. ICM47]
Length = 414
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + +++L + L K+ Q SDWS RPL +E YAA+D L E++ ++ Q
Sbjct: 136 ERFGLAAVAEQVLGLGLVKDHQASDWSVRPLPKEWLRYAALDVELLTELYYRLSKRLDQM 195
Query: 220 GNSCSSISELDSSNLDLGLKGILEKPD 246
G + E + L +K KPD
Sbjct: 196 GRWEWAQQEFAHA---LSVKPPTAKPD 219
>gi|332708965|ref|ZP_08428935.1| DNA segregation ATPase FtsK/SpoIIIE family protein [Moorea
producens 3L]
gi|332352154|gb|EGJ31724.1| DNA segregation ATPase FtsK/SpoIIIE family protein [Moorea
producens 3L]
Length = 890
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 29 LSQSSLVGLD---AEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLS 85
LS + ++ LD A+W + PR+SL+Q+ P + N ++LD+
Sbjct: 16 LSAAKILWLDTEIADWN------TPNPRLSLIQVLADPT--------DINGDKAYILDVL 61
Query: 86 SIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
P + + + + V+P+I K+ DL YL G ++ I
Sbjct: 62 DQP-EIVKDFVNYIMVNPNIEKVFHNASFDLRYLG----------GKEQANNVTCTYQIA 110
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDIS-LSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L +K+L L L + EL + + + E Q SDW RPLT++Q NYA +D
Sbjct: 111 RKLTNKKLSNPLQVSNHKLKTLALELCNFANVDTEEQSSDWGKRPLTQKQLNYAKMDTVY 170
Query: 205 LIEI 208
L +
Sbjct: 171 LAHV 174
>gi|436670107|ref|YP_007317846.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Cylindrospermum stagnale PCC 7417]
gi|428262379|gb|AFZ28328.1| DNA polymerase I family protein with 3'-5'-exonuclease and
polymerase domains [Cylindrospermum stagnale PCC 7417]
Length = 592
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 159 KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
K + SL NI ++LL I L K Q SDW +PLT+ Q YAA+DA L++++ I
Sbjct: 132 KTSSSLQNIVQKLLQIQLDKTQQISDWC-KPLTQSQLQYAALDAAILLDLYPI 183
>gi|301774747|ref|XP_002922792.1| PREDICTED: exosome component 10-like isoform 2 [Ailuropoda
melanoleuca]
Length = 887
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L D G
Sbjct: 338 FIID--TLELRSEMYILNESLTDPSIVKVFHGADSDIEWLQK-------DFGL------- 381
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 382 ---YVVNMFDTHQAARLLNLGRHSLDHLLKLYCGVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|422324994|ref|ZP_16406031.1| hypothetical protein HMPREF0737_01141 [Rothia mucilaginosa M508]
gi|353343703|gb|EHB88018.1| hypothetical protein HMPREF0737_01141 [Rothia mucilaginosa M508]
Length = 421
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 137 PYLDITSIY-NHLHHKQLGRKLPK-ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQ 194
P LD+ + N L +LG +L E +L ++LL L+K+ DWS RPL E
Sbjct: 119 PSLDMLGMRPNRLFDTELGARLAGLERVNLGATVEDLLGYKLAKKHSKEDWSRRPLPESW 178
Query: 195 KNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
NYA +D LI++ + + + Q+G ++ E +
Sbjct: 179 LNYALLDVDVLIDLRDALEELLRQQGKLQYALEEFE 214
>gi|238484333|ref|XP_002373405.1| exosome complex exonuclease Rrp6, putative [Aspergillus flavus
NRRL3357]
gi|220701455|gb|EED57793.1| exosome complex exonuclease Rrp6, putative [Aspergillus flavus
NRRL3357]
Length = 434
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P ILK+ D+I+L D+G L + +++ +H
Sbjct: 283 QMLNEVFADPSILKVFHGSSMDIIWLQR-------DLG-------LYVVGMFD-TYHAAC 327
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
PK +SL + ++ ++ K Q +DW RP+ E +YA D H L+ IF+
Sbjct: 328 ALNYPK--RSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIFD 382
>gi|156039491|ref|XP_001586853.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980]
gi|154697619|gb|EDN97357.1| hypothetical protein SS1G_11882 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 808
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 17/129 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+++L D+G L + +++ H+
Sbjct: 286 QVLNEVFADPCIIKVFHGAYMDIVWLQR-------DLG-------LYVVGLFD-THYA-- 328
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R+L SLA + K+ +D K+ Q +DW RPL EE YA D H L+ IF+ +
Sbjct: 329 CRRLGLAGGSLAFLLKKYIDFDADKKYQLADWRIRPLPEEMFFYARADTHFLLYIFDNLR 388
Query: 214 VKVAQKGNS 222
++ N+
Sbjct: 389 NELIDASNT 397
>gi|415705458|ref|ZP_11460729.1| ribonuclease D [Gardnerella vaginalis 75712]
gi|388052180|gb|EIK75204.1| ribonuclease D [Gardnerella vaginalis 75712]
Length = 487
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 148 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 203
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 204 VMSGELKKQG 213
>gi|313220222|emb|CBY31081.1| unnamed protein product [Oikopleura dioica]
Length = 597
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 41/186 (22%)
Query: 30 SQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL 89
S + VGLD EW + + +L+Q++ FL+ L + +
Sbjct: 70 SYCNFVGLDCEWVGKN-------KTALMQISVSTPAGIK----------CFLIRLCKVDI 112
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP----YLDITSIY 145
+EL+ D++KLG D LS ++ F P + D+ I
Sbjct: 113 RICYELMA-FLRDEDVVKLGCGIDGDFKRLS--------EVDFVIFHPATISFFDLRQII 163
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAH 203
+++ G LAN+ +++L L+K+ ++CS+W L+ EQK YAA DA
Sbjct: 164 PATNYQNGG---------LANLTRQILGRKLNKDYRVRCSNWEADTLSNEQKTYAADDAV 214
Query: 204 CLIEIF 209
C ++I
Sbjct: 215 CALQIL 220
>gi|148284142|ref|YP_001248232.1| ribonuclease D [Orientia tsutsugamushi str. Boryong]
gi|146739581|emb|CAM79331.1| ribonuclease D [Orientia tsutsugamushi str. Boryong]
Length = 210
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 135 VEPYLDITSIYNHLHHKQLGRKLPK---ETKSLANICKELLDISLSKELQCSDWSNRPLT 191
++ YL +T N++ + KL + ++ L ++C+ELL I +SK+ Q SDW + LT
Sbjct: 93 IQYYLGVT--LNNIFCTNVASKLVRTYTDSHGLKDLCRELLGIQISKQCQSSDWGRQSLT 150
Query: 192 EEQKNYAAIDAHCLIEIFNIFQ 213
+Q+ YAA D L I NI +
Sbjct: 151 SDQEEYAAKDVVYLHRIKNILE 172
>gi|118467912|ref|YP_887109.1| ribonuclease D [Mycobacterium smegmatis str. MC2 155]
gi|399987123|ref|YP_006567472.1| ribonuclease D [Mycobacterium smegmatis str. MC2 155]
gi|118169199|gb|ABK70095.1| ribonuclease D [Mycobacterium smegmatis str. MC2 155]
gi|399231684|gb|AFP39177.1| Putative ribonuclease D [Mycobacterium smegmatis str. MC2 155]
Length = 415
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL + L K +DWS RPL +E NYAA+D L+E+ +
Sbjct: 135 GRLAGFERVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEWLNYAALDVEVLLELRHAIA 194
Query: 214 VKVAQKGNSCSSISELD 230
+ ++G + + E +
Sbjct: 195 AVLEEQGKTEWAAQEFE 211
>gi|170112858|ref|XP_001887630.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637532|gb|EDR01817.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 854
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 71 SDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
SD N +V LL L E L E+F P I+K+ + D+++L F
Sbjct: 286 SDRENDWIVDLLALRDE-----IEQLNEIFTDPKIVKVLHGAESDVVWLQQDFN------ 334
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
+ I ++++ H +L P+ LAN+ + D K Q +DW RPL
Sbjct: 335 --------VYIVNLFDTFHASKL-LDFPRH--GLANLLEMYCDYIPDKRYQLADWRIRPL 383
Query: 191 TEEQKNYAAIDAHCLIEIFN 210
+E +YA D H L+ I++
Sbjct: 384 PQEMLDYARSDTHFLLFIYD 403
>gi|405972152|gb|EKC36938.1| Exosome component 10 [Crassostrea gigas]
Length = 826
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 42/221 (19%)
Query: 7 KPLKIHLVTST------ESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
+PLK LV T E + + L + +V +D E RS Q L+Q+
Sbjct: 241 EPLKPRLVEDTPLTFVSTVIELSSVIDKLRKEHIVAVDLEHHSYRSFQG---ITCLMQI- 296
Query: 61 CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS 120
S A+ FL+D ++ L + L E+F P ++K+ D+ +L
Sbjct: 297 -------------STATDDFLID--TLALRNDLSPLNEIFTHPAVVKVFHGADSDIDWLQ 341
Query: 121 STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL 180
D+G + N Q R L SLA++ + D+ K+
Sbjct: 342 R-------DLGL----------YVVNMFDTGQAARVLNHSRFSLAHLMEHYCDVITDKQY 384
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
Q +DW RPL E YA D H L I+ + ++ +GN
Sbjct: 385 QLADWRIRPLPAELMKYAREDTHYLTYIYQRMKQELLARGN 425
>gi|350403861|ref|XP_003486927.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus impatiens]
Length = 609
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 40/190 (21%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+ ++G D EW + S VSLLQLA FN V L + I
Sbjct: 83 NDVLGFDCEWVNEGS-------VSLLQLA-----TFN--------GVCGLFRIGKIGY-- 120
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
I + LK+L + DILK+G +D + + + GC RV +D+ ++ +
Sbjct: 121 IPQKLKDLLANKDILKVGVASYEDGQKILADY---GC-----RVSSTIDLRTLAARV--- 169
Query: 152 QLGRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
KLP +SLA + + L + + K E++C +W LT+EQ YAA DA + I+
Sbjct: 170 ----KLP-SPQSLAAMSLQYLGLEMDKLIEIRCGNWDAGTLTDEQVAYAACDAIASVLIY 224
Query: 210 NIFQVKVAQK 219
+ K+ +K
Sbjct: 225 DQITQKMKEK 234
>gi|333991066|ref|YP_004523680.1| hypothetical protein JDM601_2426 [Mycobacterium sp. JDM601]
gi|333487034|gb|AEF36426.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length = 420
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL E NYAA+D LIE+ ++ +G S
Sbjct: 143 NLAAMVQRLLGLGLAKGHGAADWSKRPLPAEWLNYAALDVEVLIELREAIAEVLSGQGKS 202
Query: 223 CSSISEL 229
+ E
Sbjct: 203 DWAAQEF 209
>gi|281349256|gb|EFB24840.1| hypothetical protein PANDA_011805 [Ailuropoda melanoleuca]
Length = 834
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSEMYILNESLTDPSIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCGVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|256395899|ref|YP_003117463.1| 3'-5' exonuclease [Catenulispora acidiphila DSM 44928]
gi|256362125|gb|ACU75622.1| 3'-5' exonuclease [Catenulispora acidiphila DSM 44928]
Length = 443
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 146 NHLHHKQLGRKLP-KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
L +LG +L E L + E+L + L K SDWS RPL E YAA+D
Sbjct: 142 GGLFDTELGARLGGHERVGLGPLVAEVLKLELEKGHSASDWSTRPLPEAWLRYAALDVEV 201
Query: 205 LIEIFNIFQVKVAQKGNSCSSISELDS 231
L+E+ +I + ++ G + E D+
Sbjct: 202 LVEVRDIIEDELRGAGKLDWARQEFDA 228
>gi|255712831|ref|XP_002552698.1| KLTH0C11066p [Lachancea thermotolerans]
gi|238934077|emb|CAR22260.1| KLTH0C11066p [Lachancea thermotolerans CBS 6340]
Length = 735
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+W +L E+F P I K+ D+I+L D+G L I S+++ H
Sbjct: 276 LW-ILNEVFTDPKITKVLHGAFMDIIWLQR-------DLG-------LYIVSLFDTYHAS 320
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+L L SLA + + SK+ Q SDW RPL + K YA D H L+ I++
Sbjct: 321 RL---LGSPKHSLAYLLERYAHFKTSKKYQLSDWRVRPLPKALKAYARADTHFLLNIYD 376
>gi|126732863|ref|ZP_01748654.1| 3'-5' exonuclease [Sagittula stellata E-37]
gi|126706639|gb|EBA05713.1| 3'-5' exonuclease [Sagittula stellata E-37]
Length = 204
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L L PD+LKL + D+ + + F + + ++ L T H
Sbjct: 63 LSRLLTDPDVLKLFHYGRFDIAAMYNAFGALAAPVYCTKIASRLVRTYTDRH-------- 114
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L N+ +ELL + +SK+ Q SDW LT+ QK+YAA D L +
Sbjct: 115 -------GLKNLTQELLGVDISKQQQSSDWGAETLTDAQKDYAASDVLHLHRLRTALNAM 167
Query: 216 VAQKGNS 222
+ ++G +
Sbjct: 168 LEREGRT 174
>gi|260906565|ref|ZP_05914887.1| putative ribonuclease D [Brevibacterium linens BL2]
Length = 384
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E LA + + L + L+KE +DWS RPL +E NYAA+D L+ I +I
Sbjct: 112 ARMLGWEKFGLAAVAERTLGVRLAKEHSAADWSKRPLPKEWLNYAALDVEVLLPIRDILH 171
>gi|167527362|ref|XP_001748013.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773431|gb|EDQ87070.1| predicted protein [Monosiga brevicollis MX1]
Length = 837
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S S +L+D ++ L +LL +F P ILK+ D+++L
Sbjct: 310 STRSEDYLID--TLALRDDLKLLNVIFADPAILKVLHGADSDILWLQRDHS--------- 358
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
I N Q R L SLA + + + K+ Q +DW RPL+EE
Sbjct: 359 --------LYIVNMFDTGQATRVLNFPRHSLAWLLQHYCNFKADKKYQLADWRVRPLSEE 410
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
+YA D H L+ I++ ++ +GN +++
Sbjct: 411 MLHYARCDTHFLLYIYDRLHSELLAQGNEQANL 443
>gi|415707417|ref|ZP_11462186.1| ribonuclease D [Gardnerella vaginalis 0288E]
gi|388053806|gb|EIK76770.1| ribonuclease D [Gardnerella vaginalis 0288E]
Length = 481
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 148 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 203
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 204 VMSGELKKQG 213
>gi|126731278|ref|ZP_01747085.1| ribonuclease D [Sagittula stellata E-37]
gi|126708189|gb|EBA07248.1| ribonuclease D [Sagittula stellata E-37]
Length = 385
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L T+ E +F ARA Q + +D E+ +R++ S ++ L+QLA PG + D
Sbjct: 4 LTTTEELSDFC--ARAKGQP-YITVDTEFLRERTYYS---KLCLIQLAL-PG-----KGD 51
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
E V ++D S+ + L ELF I+K+ +QDL F G
Sbjct: 52 EDAVLVDPMVDGLSL------DPLLELFRDESIVKVFHAARQDLEIF---FIDHGVI--- 99
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
+P D T + + G ++ ET + K + L K + +DWS RPLT+
Sbjct: 100 --PQPLFD-TQVAAMVCG--FGEQVGYET-----LVKRIAKQQLDKSSRFTDWSRRPLTD 149
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISEL 229
QK+YA D L EI+ K+ + G S EL
Sbjct: 150 AQKSYALADVTHLREIYEFLAAKLEESGRSRWVAEEL 186
>gi|375264824|ref|YP_005022267.1| ribonuclease D [Vibrio sp. EJY3]
gi|369840148|gb|AEX21292.1| ribonuclease D [Vibrio sp. EJY3]
Length = 388
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 47/220 (21%)
Query: 32 SSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPS 91
+ +V LD E+ R+ +P++ L+QL D +N S++ +L+ + P
Sbjct: 38 ADVVMLDTEFVRIRTF---YPQLGLIQL-----------FDGNNLSLIDPTELTDMS-PF 82
Query: 92 IWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
+ ELLK+ +LK+ +DL + F GC P +D + L H
Sbjct: 83 V-ELLKD----TSVLKVLHACGEDLEVFQNAF---GCTPF-----PMVDTQLMAAFLGHG 129
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
+ A + +E L + L K +DW RPLT++Q +YAA D H L+ ++ I
Sbjct: 130 L--------STGFATLVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEI 181
Query: 212 FQVKVAQKGN-----------SCSSISELDSSNLDLGLKG 240
KV + G I E++ N L +KG
Sbjct: 182 LLDKVTEAGWWHAVQQESDLLVSKRIREVNEENAYLDIKG 221
>gi|194900862|ref|XP_001979974.1| GG21034 [Drosophila erecta]
gi|190651677|gb|EDV48932.1| GG21034 [Drosophila erecta]
Length = 900
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SLA + K LD+ + K LQ +DW RPL ++ +YA D H LI ++ + Q+
Sbjct: 385 SLAYLLKYYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYERMTNDLLQQQTD 444
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT 266
++ + + D+ K KP IG ++ LD++R T
Sbjct: 445 TGLLASVYQQSTDV-CKKRYNKPHIGPES-------HLDLVRKT 480
>gi|94500848|ref|ZP_01307374.1| ribonuclease D [Bermanella marisrubri]
gi|94426967|gb|EAT11949.1| ribonuclease D [Oceanobacter sp. RED65]
Length = 382
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 167 ICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ K+LLDI L K SDW RPLT+EQ +YAA D L+EI + ++ +G
Sbjct: 129 LVKQLLDIDLEKGATRSDWLQRPLTDEQIHYAADDVEHLLEITKRLETQLVTQG 182
>gi|441207706|ref|ZP_20973646.1| ribonuclease III [Mycobacterium smegmatis MKD8]
gi|440627889|gb|ELQ89694.1| ribonuclease III [Mycobacterium smegmatis MKD8]
Length = 405
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL + L K +DWS RPL +E NYAA+D L+E+ +
Sbjct: 125 GRLAGFERVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEWLNYAALDVEVLLELRHAIA 184
Query: 214 VKVAQKGNSCSSISELD 230
+ ++G + + E +
Sbjct: 185 AVLEEQGKTEWAAQEFE 201
>gi|341889055|gb|EGT44990.1| hypothetical protein CAEBREN_17638 [Caenorhabditis brenneri]
Length = 864
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 25/137 (18%)
Query: 80 FLLDLSSIPLPSIWE---LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
F++D P P IW+ +L + F +P ILK+ D+++L F ++ FD
Sbjct: 321 FIID----PFP-IWDEIGILNDPFANPTILKVLHGSDNDVLWLQRDFGVHIVNL-FD--- 371
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ K+L K PK +LA + D+ L K+ Q +DW RPL++ N
Sbjct: 372 ---------TYVAMKKL--KFPK--FNLAYLVSRFADVILDKQYQLADWRARPLSKAMIN 418
Query: 197 YAAIDAHCLIEIFNIFQ 213
YA D H L+ +++ +
Sbjct: 419 YAREDTHYLLYCYDMLR 435
>gi|417556961|ref|ZP_12208016.1| 3'-5' exonuclease [Gardnerella vaginalis 315-A]
gi|333601892|gb|EGL13326.1| 3'-5' exonuclease [Gardnerella vaginalis 315-A]
Length = 481
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 148 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 203
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 204 VMSGELKKQG 213
>gi|310815760|ref|YP_003963724.1| ribonuclease D [Ketogulonicigenium vulgare Y25]
gi|385233276|ref|YP_005794618.1| ribonuclease D [Ketogulonicigenium vulgare WSH-001]
gi|308754495|gb|ADO42424.1| ribonuclease D [Ketogulonicigenium vulgare Y25]
gi|343462187|gb|AEM40622.1| Ribonuclease D [Ketogulonicigenium vulgare WSH-001]
Length = 388
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 48/235 (20%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
+T+TE+ ++ V +D E+ +R++ + ++ L+QLA P++D
Sbjct: 4 ITTTEA--LASFCAEAAKHPYVTVDTEFLRERTY---YAKLCLVQLAFS-----GPDADA 53
Query: 74 SNASVVFLLDLSSIPLPSIWEL--LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIG 131
+ L+D PL +L L +LF++P ++K+ +QDL S +G
Sbjct: 54 A------LVD----PLADGIDLKPLYDLFLNPAVVKVFHAARQDLEIFS---------VG 94
Query: 132 FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
+ + L T + + G ++ ET + +++ + K + +DWS RPL+
Sbjct: 95 QNVIPAPLFDTQVAAMVCG--YGEQVSYET-----LARKIAKADIDKTSRFTDWSRRPLS 147
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPD 246
E QK YA D L +I+ ++A+ G + E+ G+L PD
Sbjct: 148 EAQKEYALADVTHLRQIYENLSAQIAKSGRAAWVAEEM----------GVLNDPD 192
>gi|308234712|ref|ZP_07665449.1| ribonuclease D [Gardnerella vaginalis ATCC 14018 = JCM 11026]
gi|311114520|ref|YP_003985741.1| hypothetical protein HMPREF0421_20636 [Gardnerella vaginalis ATCC
14019]
gi|310946014|gb|ADP38718.1| conserved hypothetical protein [Gardnerella vaginalis ATCC 14019]
Length = 481
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K LGRK L+++ + L ++L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 148 KLLGRK----RFGLSSVTEYYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELEE 203
Query: 211 IFQVKVAQKG 220
+ ++ ++G
Sbjct: 204 VMSGELKKQG 213
>gi|110636308|ref|YP_676516.1| 3'-5' exonuclease [Chelativorans sp. BNC1]
gi|110287292|gb|ABG65351.1| 3'-5' exonuclease [Chelativorans sp. BNC1]
Length = 205
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
+ L +IC ELL ++LSK Q SDW+ LT EQ YAA D L + ++ Q ++ +
Sbjct: 113 DRHGLKDICYELLQVNLSKAQQSSDWAAEQLTPEQLEYAASDVLYLHRLADVLQQRLMRD 172
Query: 220 GNS 222
G +
Sbjct: 173 GRA 175
>gi|317508452|ref|ZP_07966122.1| 3'-5' exonuclease [Segniliparus rugosus ATCC BAA-974]
gi|316253299|gb|EFV12699.1| 3'-5' exonuclease [Segniliparus rugosus ATCC BAA-974]
Length = 470
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA + + LL + L+K +DWS RPL E NYAA+D L+ +
Sbjct: 156 GRIAGFERVGLAALVETLLGVGLAKGHGAADWSQRPLPPEWLNYAALDVELLLPMREALL 215
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + ++ E +
Sbjct: 216 EALAEQGKTEWALEEFE 232
>gi|386016043|ref|YP_005934328.1| ribonuclease D Rnd [Pantoea ananatis AJ13355]
gi|327394110|dbj|BAK11532.1| ribonuclease D Rnd [Pantoea ananatis AJ13355]
Length = 274
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLTE Q YAA D H L+ I + +V Q GN
Sbjct: 18 GFASMVAHFTQVELDKSEARTDWLARPLTERQCQYAAADVHYLLPIAHQLMQQVEQVGNM 77
Query: 223 CSSISE 228
+++SE
Sbjct: 78 AAALSE 83
>gi|427730149|ref|YP_007076386.1| ribonuclease D [Nostoc sp. PCC 7524]
gi|427366068|gb|AFY48789.1| ribonuclease D [Nostoc sp. PCC 7524]
Length = 306
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 30/194 (15%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
+++ E + + +Q++ + +D E ++S PR+SL+Q+ P + +
Sbjct: 5 SDAREISAIVAEYTQATTLWIDTEVA---EYKSRNPRLSLIQVLDDPH--------DMSG 53
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRV 135
V+LLD+ + P I E ++++ V+P I K+ DL +L + C +
Sbjct: 54 DRVYLLDVLNQP-EVIAEFIEQIMVNPAIEKVFHNANFDLKFLGNKQAKNITCTWELAKK 112
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDIS-LSKELQCSDWSNRPLTEEQ 194
PY LP L + EL + + + K+ Q SDW RPL+EEQ
Sbjct: 113 IPYY----------------LLPLPNYQLQTLATELCNFNYIDKQEQSSDWGRRPLSEEQ 156
Query: 195 KNYAAIDAHCLIEI 208
YA +D L +I
Sbjct: 157 IEYAYLDCIYLAQI 170
>gi|390364698|ref|XP_798576.3| PREDICTED: probable exonuclease mut-7 homolog [Strongylocentrotus
purpuratus]
Length = 207
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 79 VFLLDLSSIPLPSIWELLKELFV----SPDILKLGFKFKQDLIYLSSTFCS-QGCDIGFD 133
V+LLD+ ++ +P +++K F S DILKLGF D LS +F Q G
Sbjct: 26 VYLLDMRALWVPETKDIVKTFFQRLLQSEDILKLGFGISGDYKMLSQSFLEVQEALKGEK 85
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
R +DI + + Q+ + L ++ +L K + SDW RPL++
Sbjct: 86 RT---VDINGLSKRIL--QMISAPVNSSFGLTDLVHFCFGKNLDKRDRMSDWEKRPLSQA 140
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISEL 229
Q YA I+ ++N Q +++ G S S+ L
Sbjct: 141 QMTYAGINEEA---VWNRLQQQISALGVSSSNTFAL 173
>gi|325180763|emb|CCA15173.1| LETM1 and EFhand domaincontaining protein 1 putative [Albugo
laibachii Nc14]
Length = 1136
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 35/196 (17%)
Query: 25 LARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLD 83
A L +VG+D E +P+ S+++N P VSL+Q+ S V+L
Sbjct: 142 FASVLQNVKIVGIDTECRPRFDSNKANNP-VSLIQI--------------STIDTVYLYR 186
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ LL L SP ++K+G + D L + +RV LD
Sbjct: 187 IKRQQPLP--PLLGHLLASPHVIKVGHSLRDDCKSLRESKL-------VERVSSTLDTLP 237
Query: 144 IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAH 203
I K+LG P L +C+ LD +LSK++Q SDW + L+ +Q YAA DA
Sbjct: 238 IA-----KRLGCSRP----GLKTLCQIFLDHNLSKKMQLSDWESPDLSVKQIQYAATDAW 288
Query: 204 C-LIEIFNIFQVKVAQ 218
L+ I + Q K A+
Sbjct: 289 APLLVILKMLQFKEAR 304
>gi|303325512|ref|ZP_07355955.1| 3'- 5' exonuclease domain protein [Desulfovibrio sp. 3_1_syn3]
gi|302863428|gb|EFL86359.1| 3'- 5' exonuclease domain protein [Desulfovibrio sp. 3_1_syn3]
Length = 216
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 47/211 (22%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLAC 61
C Y+ P +H++ E ++ L ++G D E +P R + N P SL+QLA
Sbjct: 17 CHYQGP--VHVIRVLE--DWKQALPDLRADGVLGFDTETRPTFRKGKINAP--SLIQLAT 70
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSS 121
+ V+L+ L+ +P L E+ P+++K G + D+ LS
Sbjct: 71 E--------------RAVYLVQLAWLPFGP---HLAEILADPNVIKAGVGIRDDMRELSR 113
Query: 122 T--FCSQG-CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK 178
F G D+G + KLP ++ L + L +SK
Sbjct: 114 LHDFEPAGLVDLG------------------NAARAHKLP--SQGLRTLAANLFGWRISK 153
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
QCS+WS L++ Q YAA DA IF
Sbjct: 154 GSQCSNWSLMELSQRQIAYAATDAWIGRLIF 184
>gi|190344443|gb|EDK36119.2| hypothetical protein PGUG_00217 [Meyerozyma guilliermondii ATCC
6260]
Length = 755
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQL 153
+L E+F +P+I+K+ D+I+L D+G L + S+++ H K+L
Sbjct: 288 VLNEIFANPNIVKVFHGAFMDIIWLQR-------DLG-------LYVVSLFDTYHASKKL 333
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
G LP+ SLA + + + SK+ Q +DW RPL+ +YA D H L+ +++ +
Sbjct: 334 G--LPR--FSLAYLLENYANFKTSKKYQLADWRMRPLSGPMLSYARSDTHFLLYVYDQLR 389
Query: 214 VKVAQKGN 221
++ G+
Sbjct: 390 NQLLSSGS 397
>gi|399527748|ref|ZP_10767435.1| 3'-5' exonuclease [Actinomyces sp. ICM39]
gi|398361684|gb|EJN45426.1| 3'-5' exonuclease [Actinomyces sp. ICM39]
Length = 414
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + +++L + L K+ Q SDWS RPL +E YAA+D L E++ ++ Q
Sbjct: 136 ERFGLAAVAEQVLGLGLVKDHQASDWSVRPLPKEWLRYAALDVELLTELYYRLSKRLDQM 195
Query: 220 G 220
G
Sbjct: 196 G 196
>gi|452852181|ref|YP_007493865.1| 3'-5' exonuclease (modular protein) [Desulfovibrio piezophilus]
gi|451895835|emb|CCH48714.1| 3'-5' exonuclease (modular protein) [Desulfovibrio piezophilus]
Length = 270
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 39/202 (19%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDE 73
V TE L + +++ +++G D E +P SL+QLA
Sbjct: 100 VVRTEKQRIQAL-KEMAKETILGFDTETRPVFKKGKKPGPPSLIQLAT------------ 146
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQGCDIG 131
A V++ ++ + L + L +L I K G + D++ L + F G
Sbjct: 147 --AEQVYVFQINILRL---CDGLCDLLADESITKTGVAVRDDILGLQRLADFDPAG---- 197
Query: 132 FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
++D++ I K +T L N+ LL +SK QCS+W+ LT
Sbjct: 198 ------FIDLSDI---------SAKASMQTHGLRNMAANLLGFRISKSAQCSNWAKEKLT 242
Query: 192 EEQKNYAAIDAHCLIEIFNIFQ 213
++Q +YAA DA E+F Q
Sbjct: 243 QQQISYAATDAWVSRELFLALQ 264
>gi|348687564|gb|EGZ27378.1| hypothetical protein PHYSODRAFT_553959 [Phytophthora sojae]
Length = 588
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L I + L + L K + SDW RPLT Q YAA+DAH L++I+ Q
Sbjct: 518 LTAIAETYLGLPLDKRARMSDWERRPLTPAQLQYAALDAHVLVQIYYKMQ 567
>gi|320588480|gb|EFX00949.1| exosome complex exonuclease [Grosmannia clavigera kw1407]
Length = 1631
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P +K+ D+++L D+G L I +++
Sbjct: 291 EILNEVFADPTKIKVFHGATSDIVWLQR-------DLG-------LYIVGLFDTYFACDC 336
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L +SLA + K+ +D K+ Q +DW RPL EE YA D H L+ ++++ +
Sbjct: 337 ---LEYPARSLAYLLKKFVDFDADKKYQMADWRIRPLPEEMLYYARSDTHFLLYVYDMVR 393
Query: 214 VKVAQK 219
++A+K
Sbjct: 394 NELAEK 399
>gi|345892380|ref|ZP_08843202.1| hypothetical protein HMPREF1022_01862 [Desulfovibrio sp.
6_1_46AFAA]
gi|345047282|gb|EGW51148.1| hypothetical protein HMPREF1022_01862 [Desulfovibrio sp.
6_1_46AFAA]
Length = 216
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 47/211 (22%)
Query: 3 CTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLAC 61
C Y+ P +H++ E ++ L ++G D E +P R + N P SL+QLA
Sbjct: 17 CHYQGP--VHVIRVLE--DWKQALPDLRADGVLGFDTETRPTFRKGKINAP--SLIQLAT 70
Query: 62 QPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSS 121
+ V+L+ L+ +P L E+ P+++K G + D+ LS
Sbjct: 71 E--------------RAVYLVQLAWLPFGP---HLAEILADPNVIKAGVGIRDDMRELSR 113
Query: 122 T--FCSQG-CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK 178
F G D+G + KLP ++ L + L +SK
Sbjct: 114 LHDFEPAGLVDLG------------------NAARAHKLP--SQGLRTLAANLFGWRISK 153
Query: 179 ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
QCS+WS L++ Q YAA DA IF
Sbjct: 154 GSQCSNWSLMELSQRQIAYAATDAWIGRLIF 184
>gi|229817486|ref|ZP_04447768.1| hypothetical protein BIFANG_02749 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785275|gb|EEP21389.1| hypothetical protein BIFANG_02749 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 430
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
LA + + L I+L+KE +DWS RPL + +NYAA+D LIE+
Sbjct: 131 GLAAVTERYLGITLAKEHSAADWSYRPLPRDWRNYAALDVELLIEL 176
>gi|189426679|ref|YP_001953856.1| 3'-5' exonuclease [Geobacter lovleyi SZ]
gi|189422938|gb|ACD97336.1| 3'-5' exonuclease [Geobacter lovleyi SZ]
Length = 381
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
LA + +E I L K Q +DWS RPLT E +YAA D L+E+ + ++ Q G
Sbjct: 119 GLAALLREHFGIELDKRFQKADWSKRPLTTEMADYAAHDTAHLLELADRLHARLEQLGR 177
>gi|213964497|ref|ZP_03392697.1| ribonuclease D [Corynebacterium amycolatum SK46]
gi|213952690|gb|EEB64072.1| ribonuclease D [Corynebacterium amycolatum SK46]
Length = 433
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L E +LA + + LL + L+K DWS RPL + +YAA+D LIE+ +
Sbjct: 126 GRLLGLERVNLAALTERLLGVGLAKGHGREDWSTRPLPADWLDYAALDVELLIELAEVL- 184
Query: 214 VKVAQKGNSCSSISELD 230
C +++ELD
Sbjct: 185 ---------CQALTELD 192
>gi|224123860|ref|XP_002319182.1| predicted protein [Populus trichocarpa]
gi|222857558|gb|EEE95105.1| predicted protein [Populus trichocarpa]
Length = 858
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 17/119 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+++L F C++ FD Q R
Sbjct: 298 LREVFKDPAKRKVMHGADRDVVWLQRDFGIYICNL-FDT----------------GQASR 340
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
L E SL ++ ++ +KE Q +DW RPL +E YA D H L+ I+++ +
Sbjct: 341 VLKLERNSLEHLLHHFCGVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLHIYDLMRA 399
>gi|407781896|ref|ZP_11129112.1| ribonuclease D [Oceanibaculum indicum P24]
gi|407206935|gb|EKE76879.1| ribonuclease D [Oceanibaculum indicum P24]
Length = 203
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
L ++C+ELL + LSK+ Q SDW LT+EQ YAA D L ++ + ++A++G +
Sbjct: 115 GLKDLCRELLGVDLSKQQQSSDWGADELTQEQLAYAASDVLHLHKLKAVLDERLAREGRT 174
>gi|315656649|ref|ZP_07909536.1| ribonuclease D [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315492604|gb|EFU82208.1| ribonuclease D [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 406
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + +++L ISL+KE +DWS RPL + + YAA+D LI++ N +++
Sbjct: 131 LAAVLEQVLGISLAKEHSAADWSTRPLPSDWQTYAALDVDYLIDLRNHLWLQLQDADKDD 190
Query: 224 SSISELD 230
+ E D
Sbjct: 191 WAEQEFD 197
>gi|304389402|ref|ZP_07371365.1| ribonuclease D [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304327212|gb|EFL94447.1| ribonuclease D [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 406
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + +++L ISL+KE +DWS RPL + + YAA+D LI++ N +++
Sbjct: 131 LAAVLEQVLGISLAKEHSAADWSTRPLPSDWQTYAALDVDYLIDLRNHLWLQLQDADKDD 190
Query: 224 SSISELD 230
+ E D
Sbjct: 191 WAEQEFD 197
>gi|386852024|ref|YP_006270037.1| ribonuclease D [Actinoplanes sp. SE50/110]
gi|359839528|gb|AEV87969.1| ribonuclease D [Actinoplanes sp. SE50/110]
Length = 411
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + + LL SL K +DWS RPL E YAA+D L ++ ++ ++ ++
Sbjct: 132 ERVGLAALTEHLLGYSLEKHHSAADWSTRPLPESWLTYAALDVELLTDLRDLLATELDKQ 191
Query: 220 GNSCSSISELDSSNLDLGLKGILEKPDIGNKTV---RFKLCEALDIIRATSYY------- 269
G + + E +S + + +PD +T R + A +RA Y
Sbjct: 192 GKAGWAAEEF-ASLVASADRPPRVRPDPWRRTSGIHRVRGARAQSRVRALWYARDAIAAR 250
Query: 270 -----SQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLR 307
+ LP+ + V+ P DE + + +G + + R
Sbjct: 251 KDSAPGRVLPDSAI--VAAAEADPKDERTLLAIPGFGGRSVRR 291
>gi|359319089|ref|XP_003638993.1| PREDICTED: exosome component 10 isoform 1 [Canis lupus familiaris]
Length = 861
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESLTDPTIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|294786964|ref|ZP_06752218.1| HRDC:3-5 exonuclease [Parascardovia denticolens F0305]
gi|315226603|ref|ZP_07868391.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105
= JCM 12538]
gi|420237019|ref|ZP_14741492.1| ribonuclease D [Parascardovia denticolens IPLA 20019]
gi|294485797|gb|EFG33431.1| HRDC:3-5 exonuclease [Parascardovia denticolens F0305]
gi|315120735|gb|EFT83867.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105
= JCM 12538]
gi|391879715|gb|EIT88219.1| ribonuclease D [Parascardovia denticolens IPLA 20019]
Length = 432
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
LA + + LD++L+KE +DWS RPL + + YAA+D LIE+ + + + + G
Sbjct: 135 GLAAVTERYLDLTLAKEHSAADWSYRPLDRDMRIYAALDVEVLIELEGLMKKDLKKAG 192
>gi|428770574|ref|YP_007162364.1| 3'-5' exonuclease [Cyanobacterium aponinum PCC 10605]
gi|428684853|gb|AFZ54320.1| 3'-5' exonuclease [Cyanobacterium aponinum PCC 10605]
Length = 307
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 25/200 (12%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP-GPRFNPES 71
+V TE E + L+ + ++ LD E +Q++ PR+SL+Q+ P R +PE
Sbjct: 1 MVYLTEVEEIKEIILDLTDTDILWLDTEVA---DYQTSHPRLSLIQVLAYPQDTRGDPEG 57
Query: 72 DESNASVVFLLDLSSIPLPSIWELLKE-LFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCD 129
A+ +++D+ + P I E + + V+ +I K+ DL + C
Sbjct: 58 I-CYAARTYIIDV--LEKPEIIEFFIDYIMVNENIKKVFHNANYDLRFFDKKRAKNIFCT 114
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
F R PY LP + +L + + L D + K+ Q DW RP
Sbjct: 115 YQFARKIPYY----------------LLPVKRYNLKYLTEYLTDFKVDKQEQSGDWGIRP 158
Query: 190 LTEEQKNYAAIDAHCLIEIF 209
L+ Q YA D L +++
Sbjct: 159 LSTNQLEYAKKDCVYLAQVY 178
>gi|290475404|ref|YP_003468292.1| RNase D, processes tRNA [Xenorhabdus bovienii SS-2004]
gi|289174725|emb|CBJ81524.1| RNase D, processes tRNA precursor [Xenorhabdus bovienii SS-2004]
Length = 385
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 38/187 (20%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ LD E+ R++ +P++ L+QL D S++ LD+S W+
Sbjct: 35 IALDTEFVRTRTY---YPQLGLIQL-----------FDGEQLSLIDPLDISE------WQ 74
Query: 95 LLKELFVSPDILKLGFKFKQDL-IYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+EL D+LK +DL ++ +S C P +D + + H
Sbjct: 75 PFRELLTDRDVLKFIHAGSEDLEVFWNSFQCLPT---------PMIDTQVLAAFIGHPM- 124
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ A + + L + L K +DW RPL+E+Q YAA D + L+ + +I
Sbjct: 125 -------SCGFATLVAQYLHVELDKSESRTDWLARPLSEKQCEYAAADVYYLLPLADILM 177
Query: 214 VKVAQKG 220
Q G
Sbjct: 178 AATEQAG 184
>gi|315655438|ref|ZP_07908338.1| ribonuclease D [Mobiluncus curtisii ATCC 51333]
gi|315490378|gb|EFU80003.1| ribonuclease D [Mobiluncus curtisii ATCC 51333]
Length = 406
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + +++L ISL+KE +DWS RPL + + YAA+D LI++ N +++
Sbjct: 131 LAAVLEQVLGISLAKEHSAADWSTRPLPSDWQTYAALDVDYLIDLRNHLWLQLQDADKDD 190
Query: 224 SSISELD 230
+ E D
Sbjct: 191 WAEQEFD 197
>gi|167751882|ref|ZP_02424009.1| hypothetical protein ALIPUT_00124 [Alistipes putredinis DSM 17216]
gi|167660123|gb|EDS04253.1| 3'-5' exonuclease [Alistipes putredinis DSM 17216]
Length = 203
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQP 63
+R P+ V P R L+ ++G D E +P R+ N RV+LLQL+
Sbjct: 24 FRGPI----VVVDSEPRLREACRYLAAQPVIGFDTETRPSFRAGVVN--RVALLQLS--- 74
Query: 64 GPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
+PE FL L IPL + + ++ + +ILK+G K DL L +
Sbjct: 75 ----SPEQS-------FLFRLCKIPLD---KAIVKILENKEILKIGADVKGDLRALHNIR 120
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
Q + GF +D+ ++L + E KSL + +L +SK + S
Sbjct: 121 HFQ--EAGF------VDL---------QELAGEWGIEEKSLRKLSAIVLGQRVSKAQRLS 163
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+W LT++Q+ YAA DA I++
Sbjct: 164 NWEAAQLTDKQQFYAATDAWVCTRIYD 190
>gi|297805136|ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata]
gi|297316288|gb|EFH46711.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E+F P K+ +D+I+L F C++ FD + + + N LGR
Sbjct: 321 LREIFKDPKKKKIMHGADRDIIWLQRDFGIYVCNL-FDTGQA----SRVLN------LGR 369
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
SL + + ++ +KE Q +DW RPL EE YA D H L+ I+++ +++
Sbjct: 370 N------SLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDVMRLE 423
Query: 216 V 216
+
Sbjct: 424 L 424
>gi|374293236|ref|YP_005040271.1| putative 3'-5' exonuclease [Azospirillum lipoferum 4B]
gi|357425175|emb|CBS88058.1| putative 3'-5' exonuclease [Azospirillum lipoferum 4B]
Length = 208
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
LK L P + KL F F + + + + GC +Y +L R
Sbjct: 68 LKRLLTDPGVTKL-FHFARFDVAVMKAYLGVGC-------------RPVYCTKVASKLVR 113
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+ L ++CK+LL + +SK+ Q SDW LT +Q YAA D L ++ V
Sbjct: 114 TF-TDRHGLKDLCKDLLGVEISKQQQSSDWGAPELTTDQMKYAASDVLHLHDLKAKLDVM 172
Query: 216 VAQKGNSCSSISELD----SSNLDLGLKGILEKPDI 247
+A++G + + + D LDL G E PDI
Sbjct: 173 LAREGRTHLAQACFDFLPARGELDL---GGWENPDI 205
>gi|298346894|ref|YP_003719581.1| ribonuclease D [Mobiluncus curtisii ATCC 43063]
gi|298236955|gb|ADI68087.1| ribonuclease D [Mobiluncus curtisii ATCC 43063]
Length = 406
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
LA + +++L ISL+KE +DWS RPL + + YAA+D LI++ N +++
Sbjct: 131 LAAVLEQVLGISLAKEHSAADWSTRPLPSDWQTYAALDVDYLIDLRNHLWLQLQDADKDD 190
Query: 224 SSISELD 230
+ E D
Sbjct: 191 WAEQEFD 197
>gi|378717672|ref|YP_005282561.1| putative ribonuclease D [Gordonia polyisoprenivorans VH2]
gi|375752375|gb|AFA73195.1| putative ribonuclease D [Gordonia polyisoprenivorans VH2]
Length = 428
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + ++ L L K +DWS RPL E NYAA+D LIE+ +
Sbjct: 135 GRLLGLTKVNLAAMVEQFLGFGLQKGHGAADWSKRPLPAEWLNYAALDVEVLIELRDAMD 194
Query: 214 VKVAQKGNSCSSISEL 229
+ G S + E
Sbjct: 195 AALRDAGKSDWAAEEF 210
>gi|359767832|ref|ZP_09271614.1| putative ribonuclease [Gordonia polyisoprenivorans NBRC 16320]
gi|359314748|dbj|GAB24447.1| putative ribonuclease [Gordonia polyisoprenivorans NBRC 16320]
Length = 428
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + ++ L L K +DWS RPL E NYAA+D LIE+ +
Sbjct: 135 GRLLGLTKVNLAAMVEQFLGFGLQKGHGAADWSKRPLPAEWLNYAALDVEVLIELRDAMD 194
Query: 214 VKVAQKGNSCSSISEL 229
+ G S + E
Sbjct: 195 AALRDAGKSDWAAEEF 210
>gi|359319087|ref|XP_535408.4| PREDICTED: exosome component 10 isoform 2 [Canis lupus familiaris]
Length = 886
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESLTDPTIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|334116592|ref|ZP_08490684.1| 3'-5' exonuclease [Microcoleus vaginatus FGP-2]
gi|333461412|gb|EGK90017.1| 3'-5' exonuclease [Microcoleus vaginatus FGP-2]
Length = 431
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
T + L SQ+ ++ +D E +S+ PR+SL+Q+ +S +S
Sbjct: 5 TAENDIKALITKFSQAKILWVDTEIADYKSN----PRLSLIQVLA--------DSTDSTG 52
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQ-GCDIGFDRV 135
FLLD+ P + + + ++ V+PDI K+ D+ +L + C + R
Sbjct: 53 DGTFLLDVLDKPELAK-DFVNQIMVNPDIEKVFHNASYDIRFLGNDDVQNVTCTLKMARQ 111
Query: 136 EPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDIS-LSKELQCSDWSNRPLTEEQ 194
PY LP + L + + L I+ + K Q DW+ RPLT++Q
Sbjct: 112 IPYY----------------ILPLPNRQLKTLIETLCGIAYVDKTEQSGDWAKRPLTQKQ 155
Query: 195 KNYAAIDAHCL 205
YA +DA L
Sbjct: 156 LEYAKMDAVYL 166
>gi|298712143|emb|CBJ33021.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 649
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 36/188 (19%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNFPR--VSLLQLACQPGPRFNPESDESNASVVFLLD 83
ARA S +++G D EW S + + PR V+L+QL+ + G +V+F L
Sbjct: 113 ARA-SAPAVLGFDIEW----SVRPSGPRRQVALVQLSARDG-----------YTVLFHLK 156
Query: 84 LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITS 143
+ LKEL V+ I G + DL +L +++ G +P +DI
Sbjct: 157 YEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGT-------KP-VDIGQ 208
Query: 144 IYN-HLHHKQLGRKLPKETKSLANICKELLDISLSKE-LQCSDWSNRPLTEEQKNYAAID 201
+ HLH K R SL + ELL L+K+ ++ S+W LT++Q+ YA +D
Sbjct: 209 LAGVHLHVKNGAR-------SLQALTAELLHRRLAKDAVRTSNWET-TLTKDQEKYAGLD 260
Query: 202 AHCLIEIF 209
++ + +F
Sbjct: 261 SYAGVLLF 268
>gi|297848030|ref|XP_002891896.1| hypothetical protein ARALYDRAFT_337734 [Arabidopsis lyrata subsp.
lyrata]
gi|297337738|gb|EFH68155.1| hypothetical protein ARALYDRAFT_337734 [Arabidopsis lyrata subsp.
lyrata]
Length = 681
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+ELF P K+ D+I+L F C++ FD Q R
Sbjct: 273 LRELFKDPKKKKVMHGADHDIIWLQRDFGIYVCNL-FDT----------------GQASR 315
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
L E KSL + K ++ K+ Q +DW RPL + YA D H L+ I+++ ++
Sbjct: 316 VLKLERKSLEFLLKHYCGVAADKQYQNADWRIRPLPDVMTRYAREDTHYLLYIYDVMRI 374
>gi|271967979|ref|YP_003342175.1| ribonuclease D-like protein [Streptosporangium roseum DSM 43021]
gi|270511154|gb|ACZ89432.1| Ribonuclease D-like protein [Streptosporangium roseum DSM 43021]
Length = 408
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L E L + + +L + L K +DWS RPL E+ YAA+D L+E+ ++
Sbjct: 121 GRLLGYERVGLGMMVENVLGLKLEKGHSAADWSTRPLPEDWLRYAALDVEVLVELRDVLH 180
Query: 214 VKVAQKGNSCSSISELDS 231
++ G + E S
Sbjct: 181 EELKTSGKLAWAQEEFAS 198
>gi|383761955|ref|YP_005440937.1| ribonuclease D [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382223|dbj|BAL99039.1| ribonuclease D [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 395
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L EL V P I + D++ L ++ + F RV D L KQ+G
Sbjct: 78 LGELLVDPAIEVVMHAADNDILMLYRSYGFR-----FGRV---FDTQLAARILGWKQVG- 128
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
LA I ++ I +K +Q +DW RPLT EQ YA +D H L+ + + +
Sbjct: 129 --------LAAILEKHFGIVSNKRMQRTDWGKRPLTPEQIAYAQMDTHYLLPLRDRLAEE 180
Query: 216 VAQKG---NSCSSISELDSSN 233
+ +KG + + + L SS+
Sbjct: 181 LRRKGRWEEALDAFATLTSSD 201
>gi|145252306|ref|XP_001397666.1| exosome component 3'-5' exonuclease [Aspergillus niger CBS 513.88]
gi|134083214|emb|CAK42852.1| unnamed protein product [Aspergillus niger]
gi|350633598|gb|EHA21963.1| hypothetical protein ASPNIDRAFT_49025 [Aspergillus niger ATCC 1015]
Length = 782
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+ILK+ D+I+L D+G L + +++ +H
Sbjct: 291 QVLNEVFTDPNILKVLHGSSMDIIWLQR-------DLG-------LYVVGMFD-TYHAAC 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
PK +SL + ++ ++ K Q +DW RP+ E +YA D H L+ I++
Sbjct: 336 ALNYPK--RSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIYD 390
>gi|406998744|gb|EKE16630.1| 3'-5' exonuclease [uncultured bacterium]
Length = 203
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
+I L+TS E AL +G D E KP + L+ GP
Sbjct: 26 RISLITSDALAEGA--LSALLAVDAIGFDTESKP-----------TFLKGEASTGPHLVQ 72
Query: 70 ESDESNASVVFLLDLSSIPLPSIWEL--LKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
+ +S A + P+ ++E LK + SP +LK+GF D L S
Sbjct: 73 LATDSQAYL--------FPISRLFETKALKTILESPAVLKIGFGLGNDHSVLKSRLGIAA 124
Query: 128 CDIGFDRVEPYLDITS-IYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
C++ LD+ + H +G K+ ++A+ + + SK++ S+W+
Sbjct: 125 CNV--------LDLGEKLRGPGHRGTVGAKV-----AVAHFFGQ--KLQKSKKIGTSNWA 169
Query: 187 NRPLTEEQKNYAAIDAHCLIEIF 209
N L+E Q YAA DAH ++++
Sbjct: 170 NARLSERQLLYAANDAHVALKLY 192
>gi|358368335|dbj|GAA84952.1| exosome complex exonuclease Rrp6 [Aspergillus kawachii IFO 4308]
Length = 784
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P+ILK+ D+I+L D+G L + +++ +H
Sbjct: 291 QVLNEVFTDPNILKVLHGSSMDIIWLQR-------DLG-------LYVVGMFD-TYHAAC 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
PK +SL + ++ ++ K Q +DW RP+ E +YA D H L+ I++
Sbjct: 336 ALNYPK--RSLKFLLQKFVNFEADKRYQMADWRIRPIPEGMFDYARSDTHYLLHIYD 390
>gi|158316934|ref|YP_001509442.1| 3'-5' exonuclease [Frankia sp. EAN1pec]
gi|158112339|gb|ABW14536.1| 3'-5' exonuclease [Frankia sp. EAN1pec]
Length = 499
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L E L + + +L L K +DWSNRPL E YAA+D L+E+ + +
Sbjct: 165 GRLLGYERVGLGAMVERVLGFGLEKGHSAADWSNRPLPEPWLRYAALDVELLVELRDQLE 224
Query: 214 VKVAQKGNSCSSISELDS 231
++ + + E D+
Sbjct: 225 SELVAQNKMAFARQEFDA 242
>gi|85702967|ref|ZP_01034071.1| ribonuclease D [Roseovarius sp. 217]
gi|85671895|gb|EAQ26752.1| ribonuclease D [Roseovarius sp. 217]
Length = 386
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 38/211 (18%)
Query: 14 VTSTES-PEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
+T+TE EF +AR S V +D E+ +R++ + ++ LLQLA P
Sbjct: 4 ITTTEDLAEFCAMART---HSYVTVDTEFLRERTY---YSKLCLLQLAV-------PGKG 50
Query: 73 ESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF 132
+ +A +V ++ + + E L ELF ++K+ +QDL
Sbjct: 51 DDSAVLVDPIEGEDMSM----EPLYELFRDTSVVKVFHAARQDLEIF------------- 93
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKL--PKETKSLANICKELLDISLSKELQCSDWSNRPL 190
Y+D I + + Q+ + E + K + ++ K + +DWS RPL
Sbjct: 94 -----YVDAGVIPDPMFDTQVAAMVCGFGEQVGYETLVKRIAKQTVDKSSRFTDWSRRPL 148
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQVKVAQKGN 221
T+ QK YA D L ++ K+A G
Sbjct: 149 TDAQKTYALADVTHLRVVYEFLAKKLASSGR 179
>gi|404446630|ref|ZP_11011735.1| ribonuclease D [Mycobacterium vaccae ATCC 25954]
gi|403650123|gb|EJZ05402.1| ribonuclease D [Mycobacterium vaccae ATCC 25954]
Length = 442
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR + +LA + + LL + L+K +DWS RPL E NYAA+D L+E+ +
Sbjct: 159 GRLANYDRVNLAAMVQRLLGLQLTKGHGAADWSKRPLPAEWLNYAALDVEVLLELRDAVD 218
Query: 214 VKVAQKGNSCSSISELD 230
+ ++G + + E +
Sbjct: 219 AVLQEQGKADWAAQEFE 235
>gi|440640360|gb|ELR10279.1| hypothetical protein GMDG_04665 [Geomyces destructans 20631-21]
Length = 782
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH-KQ 152
++L E+F P ILK+ D+++L D+G L I +++ H K
Sbjct: 284 QVLNEVFTDPKILKVLHGAFMDILWLQR-------DLG-------LYIVGLFDTNHACKA 329
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG SLA + K+ +D K+ Q +DW RPL E YA D H L+ I++
Sbjct: 330 LGYA----GGSLAFLLKKFIDFDADKKYQMADWRIRPLPEGMFFYARADTHFLLYIYDNM 385
Query: 213 QVKVAQK 219
+ ++ ++
Sbjct: 386 RNELVER 392
>gi|302765286|ref|XP_002966064.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
gi|300166878|gb|EFJ33484.1| hypothetical protein SELMODRAFT_84661 [Selaginella moellendorffii]
Length = 512
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 35/191 (18%)
Query: 20 PEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
P +A L SS + +D E RS Q V L+Q+ S S +V
Sbjct: 231 PALETMAAKLRASSEIAVDLENHHYRSFQGF---VCLMQV-----------STRSQDFIV 276
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
L L S I +L+ +F +P I K+ +D+++L F C++ FD
Sbjct: 277 DTLVLRS----HIGPVLRSVFANPSIRKVIHGSDRDILWLQRDFGIYVCNL-FDT----- 326
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
Q R L E LA + + +++ K Q +DW RPL+ E YA
Sbjct: 327 -----------GQAARVLRMERFGLAFLLQTFCEVTPDKRYQLADWRLRPLSAEMLKYAR 375
Query: 200 IDAHCLIEIFN 210
D H L+ +++
Sbjct: 376 EDTHYLLYVYD 386
>gi|345327688|ref|XP_003431189.1| PREDICTED: exosome component 10 [Ornithorhynchus anatinus]
Length = 864
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 311 FIID--TLELRSELYILNESFTDPSIVKVFHGADSDIEWLQKDFG--------------- 353
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL + K ++ K+ Q +DW RPL E NYA
Sbjct: 354 --LYVVNMFDTHQAARLLNLGRHSLDYLLKHYCNVEADKQYQLADWRIRPLPREMLNYAR 411
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ +++ ++ + ++GN
Sbjct: 412 DDTHYLLFVYDKMRLDLWERGN 433
>gi|115396098|ref|XP_001213688.1| exosome component 3'-5' exonuclease [Aspergillus terreus NIH2624]
gi|114193257|gb|EAU34957.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 761
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P ILK+ D+I+L D+G L I +++ +H
Sbjct: 288 QMLNEVFTDPSILKVLHGSSMDIIWLQR-------DLG-------LYIVGMFD-TYHAAC 332
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
PK +SL + ++ ++ K Q +DW RPL +YA D H L+ I++ +
Sbjct: 333 ALNYPK--RSLKYLLQKFVNFEADKRYQMADWRIRPLPSGMFDYARSDTHYLLHIYDHLR 390
Query: 214 VKVAQKGNSCSSI 226
++ + S +++
Sbjct: 391 NELIRNSTSNNNL 403
>gi|358011816|ref|ZP_09143626.1| ribonuclease D [Acinetobacter sp. P8-3-8]
Length = 380
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 49/240 (20%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
+ E ++ + +S GLD E+ + +P++ + Q+
Sbjct: 6 NQQTELENVLNLMQHTSTYGLDTEFIKV---DTLWPKLGVFQINVN-------------- 48
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD--- 133
VFLLD +++ L W L F+ +Q++ + C + D+ +
Sbjct: 49 GQVFLLDGTTLDLQVFWNKL-------------FQARQNIFHA----CGEDIDLIYHYSE 91
Query: 134 --RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLT 191
+E D + L H G ++ S N K +LDI + K+ SDW RPLT
Sbjct: 92 KKHLENVFDTQVALSFLGH---GLQV-----SYQNALKLVLDIDIDKDQTRSDWLARPLT 143
Query: 192 EEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEK--PDIGN 249
EQ NYAA D ++ + + ++ +K I + + ++ L+ EK DIGN
Sbjct: 144 NEQMNYAANDVLYIMHLAEKVKTELEEKSLYQQVIEDCQNLTFEIALETPKEKLYSDIGN 203
>gi|296206702|ref|XP_002750328.1| PREDICTED: exosome component 10 isoform 2 [Callithrix jacchus]
Length = 885
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E +P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTNPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGNS 222
D H L+ I++ ++++ +GNS
Sbjct: 439 DDTHYLLYIYDKMRLELWDRGNS 461
>gi|300727989|ref|ZP_07061367.1| 3- 5 exonuclease domain protein [Prevotella bryantii B14]
gi|299774831|gb|EFI71445.1| 3- 5 exonuclease domain protein [Prevotella bryantii B14]
Length = 229
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 41/220 (18%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKP--QRSHQSNFPRVSLLQLACQPGPRFNPE 70
+VT E L S ++G D E +P +R Q+ +VSLLQ+
Sbjct: 26 IVTILTPGETEKAVNYLLDSDILGFDTETRPVFRRGKQN---KVSLLQVC---------- 72
Query: 71 SDESNASVVFLLDLSSIPL-PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD 129
N + FL L+ L P+I LL++ V+ K+G + DL+ L
Sbjct: 73 ----NREICFLFRLNRTGLTPAIIRLLEDTRVT----KIGLSWHDDLLGLHK-------- 116
Query: 130 IGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRP 189
+G ++++ + L K+ E KSL I L +SK + ++W
Sbjct: 117 LGDFEAGSFVEL---------QNLAPKIGIEDKSLQKIYANLFHQKISKSQRLTNWEADV 167
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISEL 229
L + QK YAA DA I+I++ Q ++ + ++EL
Sbjct: 168 LKDSQKLYAATDAWTCIQIYDELQRLISTREYELEKVTEL 207
>gi|83858515|ref|ZP_00952037.1| ribonuclease D [Oceanicaulis sp. HTCC2633]
gi|83853338|gb|EAP91190.1| ribonuclease D [Oceanicaulis sp. HTCC2633]
Length = 384
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
S N+ + L+ ++L K + +DWS RPL+++QK YA D L ++F I + K+A+ G
Sbjct: 117 SYDNLVRALVKVNLDKGSRFTDWSRRPLSDKQKEYALADVTHLRDLFPILREKLAKVGRE 176
Query: 223 CSSISELDS 231
E+ +
Sbjct: 177 AWLAEEMKT 185
>gi|296206700|ref|XP_002750327.1| PREDICTED: exosome component 10 isoform 1 [Callithrix jacchus]
Length = 860
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E +P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTNPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGNS 222
D H L+ I++ ++++ +GNS
Sbjct: 439 DDTHYLLYIYDKMRLELWDRGNS 461
>gi|340518928|gb|EGR49168.1| predicted protein [Trichoderma reesei QM6a]
Length = 818
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 27/152 (17%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+++L D+G V D + LH+
Sbjct: 286 QVLNEVFADPTIVKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFASDALHYS-- 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
++SLA + + ++ K Q +DW RP+ EE YA D H L+ I++ +
Sbjct: 336 -------SRSLAFLLSKFVNFDADKRYQLADWRIRPIPEEMLFYARSDTHFLLYIYDKIR 388
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKG-ILEK 244
N +S D SN D L G +LEK
Sbjct: 389 -------NDLVQVS--DRSNPDKDLIGRVLEK 411
>gi|383782002|ref|YP_005466569.1| putative ribonuclease D [Actinoplanes missouriensis 431]
gi|381375235|dbj|BAL92053.1| putative ribonuclease D [Actinoplanes missouriensis 431]
Length = 387
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL SL K +DWS RPL + YAA+D L ++ ++ ++ ++
Sbjct: 107 ERVGLAALTEQLLGYSLEKHHSAADWSTRPLPDSWLTYAALDVELLTDLRDLLAAELERQ 166
Query: 220 GNSCSSISEL 229
G + + E
Sbjct: 167 GKTAWAAEEF 176
>gi|392340772|ref|XP_003754165.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
gi|392348530|ref|XP_003750137.1| PREDICTED: exosome component 10-like isoform 2 [Rattus norvegicus]
Length = 860
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ + + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDRMRLELWERGN 460
>gi|407983300|ref|ZP_11163957.1| 3'-5' exonuclease family protein [Mycobacterium hassiacum DSM
44199]
gi|407375193|gb|EKF24152.1| 3'-5' exonuclease family protein [Mycobacterium hassiacum DSM
44199]
Length = 426
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 148 LHHKQLGRKLPKETK-SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
L+ +L +L K +LA + LL + L+K +DWS RPL E NYAA+D L+
Sbjct: 127 LYDTELAGRLAGHDKVNLAAEVQRLLGLQLTKGHGAADWSKRPLPPEWLNYAALDVEVLL 186
Query: 207 EIFNIFQVKVAQKGNSCSSISELD 230
E+ +A++G + + E +
Sbjct: 187 ELREAIAKVLAEQGKTEWAAQEFE 210
>gi|242218119|ref|XP_002474853.1| predicted protein [Postia placenta Mad-698-R]
gi|220725980|gb|EED79945.1| predicted protein [Postia placenta Mad-698-R]
Length = 882
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F I+K+ + D+++L F L I ++++ H ++
Sbjct: 309 EALNEVFTDSQIVKVLHGAESDIVWLQQDFN--------------LYIVNLFDTYHASKV 354
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
P+ SLA + + D + K Q +DW RPL EE YA D H L+ I++
Sbjct: 355 -LDFPRH--SLATLLEMYCDFTADKRYQLADWRIRPLPEEMLAYARSDTHFLLYIYD 408
>gi|429726584|ref|ZP_19261371.1| 3'-5' exonuclease [Prevotella sp. oral taxon 473 str. F0040]
gi|429145890|gb|EKX88970.1| 3'-5' exonuclease [Prevotella sp. oral taxon 473 str. F0040]
Length = 205
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 29 LSQSSLVGLDAEWKP--QRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSS 86
L +VG+D E +P +R Q +V+L+Q+A P+ + FL L+
Sbjct: 41 LRTQKIVGIDTETRPSFRRGQQH---KVALIQIAT-------PD-------ICFLFRLNY 83
Query: 87 IPLP-SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIY 145
+ P S+ +LL++ I K+G K D+ L + GF + ++D+
Sbjct: 84 MGFPDSLIKLLED----TQIAKVGLSLKDDIHQLEQRYP------GFS-PQHFIDL---- 128
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
+Q+ ++ E SLA + +SK Q S+W L E+Q+ YAA DA
Sbjct: 129 -----QQIATRMGIEDMSLAKLFANFFRQRISKNAQLSNWEADALDEKQRVYAATDASAC 183
Query: 206 IEIFNIFQVKVAQKGNSCSSIS 227
+ +++ Q V+ K S+S
Sbjct: 184 LLLYSRMQELVSNKQYQLISVS 205
>gi|269794953|ref|YP_003314408.1| ribonuclease D [Sanguibacter keddieii DSM 10542]
gi|269097138|gb|ACZ21574.1| ribonuclease D [Sanguibacter keddieii DSM 10542]
Length = 437
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E LA + E+L + L+KE DWS RPL + YAA+D L+E+ +
Sbjct: 143 ARILGMERVGLAAVVAEVLGLGLAKEHSAVDWSTRPLPDAWLLYAALDVEVLVELRDRMA 202
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ G + + E ++ L
Sbjct: 203 ERLEAAGKTEWARQEFEAVRL 223
>gi|431798163|ref|YP_007225067.1| ribonuclease D [Echinicola vietnamensis DSM 17526]
gi|430788928|gb|AGA79057.1| ribonuclease D [Echinicola vietnamensis DSM 17526]
Length = 203
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 34/182 (18%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
L + S +G D E +P + VSLLQL+ PE FL L+ +
Sbjct: 39 LKKYSKIGFDTETRPSFKKGVHHD-VSLLQLST-------PER-------AFLFRLNHVG 83
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
P+ ++ L P+ +K+G + D+ L ++EP S ++
Sbjct: 84 FPTS---VRSLLEDPNQVKIGAAVRDDIKALK-------------KLEPSFRQASFFDL- 126
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+++L +K+ + N+ +L+I +SK Q S+W LT +Q+ YAA DA +E+
Sbjct: 127 -NEEL-KKVGFHNVGVRNLSAMVLNIRISKSEQVSNWEAEELTPKQQLYAATDAWACLEV 184
Query: 209 FN 210
FN
Sbjct: 185 FN 186
>gi|330466515|ref|YP_004404258.1| 3'-5' exonuclease [Verrucosispora maris AB-18-032]
gi|328809486|gb|AEB43658.1| 3'-5' exonuclease [Verrucosispora maris AB-18-032]
Length = 438
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + ++LL SL K +DWS+RPL E YAA+D L ++ + ++ ++
Sbjct: 162 ERVGLAALTEQLLGYSLEKHHSAADWSSRPLPESWLTYAALDVELLTDLRDALDAELTRQ 221
Query: 220 GNS 222
G S
Sbjct: 222 GKS 224
>gi|427793373|gb|JAA62138.1| Putative exosome 3'-5' exoribonuclease complex subunit pm/scl-100
rrp6, partial [Rhipicephalus pulchellus]
Length = 911
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ + ALS+ + + +D E RS Q L+Q+ S+ + +
Sbjct: 281 QLKEMCEALSKETEIAVDLEHHSYRSFQG---FTCLMQI--------------SSRTQDY 323
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
++D ++ L ++L E+F P ILK+ D+++L F L
Sbjct: 324 IVD--TLALRHELQMLNEVFADPKILKVFHGADMDVLWLQRDFG--------------LY 367
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ +++ Q + L SLA + K I K+ Q +DW RPL E +YA
Sbjct: 368 LVGLFDT---GQAAKVLGLAHFSLAFLLKHYCQIEADKQFQLADWRIRPLPPEMVSYAQS 424
Query: 201 DAHCLIEIFNIFQVKVAQKGNSCSSI 226
D H L+ I + + +A + N ++
Sbjct: 425 DTHYLLYIMDCMKRDLADRSNENDNL 450
>gi|422631988|ref|ZP_16697165.1| ribonuclease D [Pseudomonas syringae pv. pisi str. 1704B]
gi|330941897|gb|EGH44622.1| ribonuclease D [Pseudomonas syringae pv. pisi str. 1704B]
Length = 377
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVLHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RARLS 173
>gi|381404322|ref|ZP_09929006.1| ribonuclease D [Pantoea sp. Sc1]
gi|380737521|gb|EIB98584.1| ribonuclease D [Pantoea sp. Sc1]
Length = 373
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A + + L K +DW RPLTE Q YAA D H L+ I V + GN
Sbjct: 117 GFAAMVAHFTQVELDKSESRTDWLARPLTERQCVYAAADVHYLLPIARQLMVNTEEAGNM 176
Query: 223 CSSISELDS 231
+++SE D+
Sbjct: 177 AAALSECDN 185
>gi|296115075|ref|ZP_06833717.1| 3'-5' exonuclease [Gluconacetobacter hansenii ATCC 23769]
gi|295978412|gb|EFG85148.1| 3'-5' exonuclease [Gluconacetobacter hansenii ATCC 23769]
Length = 215
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA++C+ELL + LSK+ Q SDW LT EQ YAA D L ++ + + ++
Sbjct: 121 ERHGLAHLCRELLGVELSKQQQSSDWGAPDLTPEQMTYAASDVLYLHALWARLEALLVRE 180
Query: 220 G 220
G
Sbjct: 181 G 181
>gi|262194484|ref|YP_003265693.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
gi|262077831|gb|ACY13800.1| 3'-5' exonuclease [Haliangium ochraceum DSM 14365]
Length = 925
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 139 LDITSIYNHLHHKQLGRKLPKET-KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
+DI ++++ L + R +E L +C L L K Q SDW+ RPLT+ Q +Y
Sbjct: 844 MDIENVFDTLKVSRRLRGRKREGGHGLGAVCARELGRELDKHEQRSDWTLRPLTQRQLDY 903
Query: 198 AAIDAHCLIEIFNIF 212
AA+DA L+ + F
Sbjct: 904 AALDAEVLLVLHERF 918
>gi|296419821|ref|XP_002839490.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635651|emb|CAZ83681.1| unnamed protein product [Tuber melanosporum]
Length = 838
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F +P ++K+ D+I+L D+G L I +++ + Q
Sbjct: 299 EPLNEIFTNPRVIKVLHGAFMDIIWLQR-------DLG-------LYIVGLFDTFYAAQ- 343
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
L LA+I K+ ++ K+ Q +DW RPL +E +YA D H L+ F+ +
Sbjct: 344 --ALEFARFGLAHILKKYVNFDADKQYQMADWRLRPLPKEMLDYARSDTHYLLYCFDCMR 401
Query: 214 VKVAQK 219
+ +K
Sbjct: 402 NSLVEK 407
>gi|363733349|ref|XP_001235033.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Gallus gallus]
Length = 1498
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 35/188 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
+ + LS + VG D EW P + + +++L+QL E + + +
Sbjct: 79 IRQTLSDGAAVGFDIEWPPSYT-KGKMAKIALIQLCVT----------EEKCYLFHISSM 127
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
S P + LK L I K+G + D L F +++ ++++ +
Sbjct: 128 SGFP-----KGLKRLLEDETIKKVGVGIEGDHWKLMGDFEV--------KLKSFVELADV 174
Query: 145 YNHLHHKQLGRKLP-KETKSLANICKELLDISL--SKELQCSDWSNRPLTEEQKNYAAID 201
N KL KE SL + K L L K ++C +W PL EEQK YAA D
Sbjct: 175 ANE--------KLKCKEVWSLNGLVKHLFGKQLLKDKSIRCGNWEKFPLDEEQKLYAATD 226
Query: 202 AHCLIEIF 209
A+ I+
Sbjct: 227 AYAGFIIY 234
>gi|440802927|gb|ELR23842.1| hypothetical protein ACA1_123200 [Acanthamoeba castellanii str.
Neff]
Length = 236
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ R+L E LA++ +ELL L+K S+W+NR LT EQ +YAA DA + ++N
Sbjct: 1 MARELGYERLGLASLAQELLGQRLAKGKARSNWANRQLTPEQLSYAATDAFATLLVYN 58
>gi|37679238|ref|NP_933847.1| ribonuclease D [Vibrio vulnificus YJ016]
gi|37197981|dbj|BAC93818.1| ribonuclease D [Vibrio vulnificus YJ016]
Length = 390
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 38/218 (17%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TE+ + + ++ +V LD E+ R++ +P++ L+QL F+ +S S
Sbjct: 26 TENQDLARVCSKAREADVVMLDTEFVRTRTY---YPQLGLIQL-------FDGDS-LSLI 74
Query: 77 SVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
L D+S+ EL ++K+ +DL + F +
Sbjct: 75 DPTVLTDMSA---------FTELLNDASVMKVLHACGEDLEVFHNAFGAMPV-------- 117
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
P +D + L H + A + ++ L++ L K +DW RPL+++Q
Sbjct: 118 PMVDTQIMAAFLGHGL--------STGFAALVEQYLNVELDKSESRTDWLARPLSDKQLE 169
Query: 197 YAAIDAHCLIEIFNIFQVKVAQKG--NSCSSISELDSS 232
YAA D H L+ ++ I KV G + SEL +S
Sbjct: 170 YAAADVHYLLPLYEILLEKVMAAGWWQAAQQESELQAS 207
>gi|315604318|ref|ZP_07879384.1| ribonuclease D [Actinomyces sp. oral taxon 180 str. F0310]
gi|315314024|gb|EFU62075.1| ribonuclease D [Actinomyces sp. oral taxon 180 str. F0310]
Length = 414
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + +++L + L K+ Q SDWS RPL E YAA+D L E++ ++ Q
Sbjct: 136 ERFGLAAVAEQVLGLGLVKDHQASDWSLRPLPPEWLRYAALDVELLTELYYRLSKRLDQM 195
Query: 220 GN 221
G
Sbjct: 196 GR 197
>gi|254579989|ref|XP_002495980.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
gi|238938871|emb|CAR27047.1| ZYRO0C07678p [Zygosaccharomyces rouxii]
Length = 741
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L E+F +P I+K+ D+I+L D+G L I S+++ H
Sbjct: 275 VLNEVFANPLIVKVFHGAFMDIIWLQR-------DLG-------LYIVSLFDTYH---AS 317
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L SLA + + SK+ Q +DW RPL++ YA D H L+ I++ +
Sbjct: 318 RALGFPRHSLAYLLETFASFKTSKKYQLADWRVRPLSKAMSAYARADTHFLLNIYDQLRN 377
Query: 215 KV 216
K+
Sbjct: 378 KL 379
>gi|358385873|gb|EHK23469.1| hypothetical protein TRIVIDRAFT_123406, partial [Trichoderma virens
Gv29-8]
Length = 821
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+++L D+G V D LH+
Sbjct: 286 QVLNEVFADPTIVKVFHGAYMDMVWLQR-------DLGL-YVNGLFDTFFASEALHYS-- 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
++SLA + + ++ K Q +DW RPL EE YA D H L+ I++ +
Sbjct: 336 -------SRSLAFLLSKFVNFEADKRYQLADWRIRPLPEEMMYYARSDTHYLLYIYDKIR 388
Query: 214 VKVAQ 218
+ Q
Sbjct: 389 NDLVQ 393
>gi|367467634|ref|ZP_09467558.1| Ribonuclease D [Patulibacter sp. I11]
gi|365817309|gb|EHN12283.1| Ribonuclease D [Patulibacter sp. I11]
Length = 388
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 46/229 (20%)
Query: 16 STESPEFTH-LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDES 74
S+ + H LA A ++ +G+D E+ + ++ P + L Q+A D
Sbjct: 2 SSSTDRIVHELAAAARETGRLGIDTEFVGEGRYR---PLLCLAQIAV----------DAP 48
Query: 75 NASVVFLLDLSSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
N + LLD P + E L E+ P+I + +QD+ L T+ ++ +
Sbjct: 49 NGIRIELLD------PLVDEFDPTPLAEVLADPEIEIVLHAARQDVALLKRTWKTEVRGV 102
Query: 131 GFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPL 190
FD + + + L Q+G + +E+L + L K + W RPL
Sbjct: 103 -FD-----TQVAAGFAGLR-AQMG---------YDALLREMLRVKLQKSASFTRWEQRPL 146
Query: 191 TEEQKNYAAIDAHCLIEIFNIFQVKVAQKG------NSCSSISELDSSN 233
+EEQ+ YAA D L+++ Q ++ + G C ++ E+ S
Sbjct: 147 SEEQRRYAAEDVQHLLQLAVALQNRLVESGRLEWAVEECRALEEVHDSR 195
>gi|255934162|ref|XP_002558362.1| Pc12g15620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582981|emb|CAP81189.1| Pc12g15620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 756
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ- 152
++L E+F P ILK+ D+I+L D+G L + +++ H
Sbjct: 285 QMLNEVFADPKILKVLHGSTMDIIWLQR-------DLG-------LYVVGMFDTFHAASA 330
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG PK +SL + + ++ K Q +DW RPL +YA D H L+ I++
Sbjct: 331 LG--FPK--RSLKFLLSKFVNFEADKRYQTADWRARPLPPAMFDYARSDTHYLLYIYDRL 386
Query: 213 QVKVAQKGNSCSSISELDSSN 233
+ + NS S +D N
Sbjct: 387 RNDLID--NSTEDASHIDYVN 405
>gi|326473059|gb|EGD97068.1| hypothetical protein TESG_04488 [Trichophyton tonsurans CBS 112818]
Length = 898
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+I+L D+G L + +++ H
Sbjct: 296 QVLNEVFADPSIIKVLHGSSMDVIWLQR-------DLG-------LYLVGLFDTFHAAS- 340
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+LPK KSL + E + K+ Q +DW RPL +YA D H L+ IF+
Sbjct: 341 ALQLPK--KSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFD 395
>gi|255086533|ref|XP_002509233.1| predicted protein [Micromonas sp. RCC299]
gi|226524511|gb|ACO70491.1| predicted protein [Micromonas sp. RCC299]
Length = 519
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 70/181 (38%), Gaps = 21/181 (11%)
Query: 36 GLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWEL 95
G D EW + SL+Q +P P +V FLL L L + E
Sbjct: 152 GWDIEWLVSFKAGTEPRLTSLMQFCYRPRP--------PAKAVCFLLRLC---LTGVTES 200
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+EL V P I+K+G + D + F VE L++ +
Sbjct: 201 LRELLVDPTIVKVGLNARGDAHKIRRDFNVA--------VEGVLELRDFARERAARPGHP 252
Query: 156 KLPKETKSLANICKELLDISLSKEL--QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
E+ SLA + + L L K + SDW LTE+Q YAA+D + +F Q
Sbjct: 253 GSAPESYSLAALVEWQLSHRLPKHASSRMSDWEAPKLTEDQVTYAALDGWASLLVFETLQ 312
Query: 214 V 214
Sbjct: 313 T 313
>gi|315054289|ref|XP_003176519.1| exosome component 3'-5' exonuclease [Arthroderma gypseum CBS
118893]
gi|311338365|gb|EFQ97567.1| exosome complex exonuclease RRP6 [Arthroderma gypseum CBS 118893]
Length = 827
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+I+L D+G L + +++ H +
Sbjct: 314 QILNEVFADPSIVKVLHGSSMDVIWLQR-------DLG-------LYLVGLFDTFHAASV 359
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+LPK KSL + E + K+ Q +DW RPL +YA D H L+ IF+
Sbjct: 360 -LQLPK--KSLKFLLHEYVGFDADKKYQTADWRIRPLLTGMLDYARSDTHFLLYIFD 413
>gi|392340770|ref|XP_003754164.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|392348528|ref|XP_003750136.1| PREDICTED: exosome component 10-like isoform 1 [Rattus norvegicus]
gi|149024626|gb|EDL81123.1| rCG30986, isoform CRA_a [Rattus norvegicus]
Length = 885
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIVD--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ + + +K+ Q +DW RPL EE NYA
Sbjct: 381 --LYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLNYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDRMRLELWERGN 460
>gi|433647366|ref|YP_007292368.1| ribonuclease D [Mycobacterium smegmatis JS623]
gi|433297143|gb|AGB22963.1| ribonuclease D [Mycobacterium smegmatis JS623]
Length = 422
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR + +LA + + LL + L K +DWS RPL +E NYAA+D L+++ +
Sbjct: 140 GRLAGYDRVNLAAMVQRLLGLQLMKGHGAADWSKRPLPDEWLNYAALDVEVLLDLRDAIA 199
Query: 214 VKVAQKGNSCSSISELD 230
+A++G + + E +
Sbjct: 200 DVLAEQGKTDWAAQEFE 216
>gi|91092754|ref|XP_973448.1| PREDICTED: similar to GM14514p [Tribolium castaneum]
gi|270014889|gb|EFA11337.1| hypothetical protein TcasGA2_TC010877 [Tribolium castaneum]
Length = 237
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 37/203 (18%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
LA + ++G D EW S Q+ + +L+Q++ P+ D ++ + DL
Sbjct: 63 LADEAADVLVLGFDVEWP--FSFQTGPGKAALIQIS--------PDLD--TCYLIQISDL 110
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD---RVEPYLDI 141
+P + L L P + G K D+ LS F GFD +E +D
Sbjct: 111 KKLP-----KGLSVLLAHPKVRITGVNIKNDIRKLSRDFA------GFDVEKNIENCIDS 159
Query: 142 TSIYNHLHHKQLGRKLPKETK-SLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYA 198
+ N + LP + + S+ + LL +++SK+ ++ S W PL++EQ +YA
Sbjct: 160 GVLANQI--------LPFQQRWSMERLVTFLLKMTISKDNKVRMSKWHVSPLSKEQLDYA 211
Query: 199 AIDAHCLIEIFNIFQVKVAQKGN 221
A DA+ + ++N + + AQ+ N
Sbjct: 212 ATDAYASLVLYNELKKREAQEEN 234
>gi|330813574|ref|YP_004357813.1| ribonuclease D related protein [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486669|gb|AEA81074.1| ribonuclease D related protein [Candidatus Pelagibacter sp.
IMCC9063]
Length = 205
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+LGR + L +I KELL+I+L+K Q SDW + L+EEQK YAA+D
Sbjct: 108 KLGRTYT-DKHGLYDITKELLNITLNKSQQSSDWGLKDLSEEQKQYAALDV 157
>gi|326477901|gb|EGE01911.1| exosome complex exonuclease Rrp6 [Trichophyton equinum CBS 127.97]
Length = 824
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+I+L D+G L + +++ H
Sbjct: 306 QVLNEVFADPSIIKVLHGSSMDVIWLQR-------DLG-------LYLVGLFDTFHAAS- 350
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+LPK KSL + E + K+ Q +DW RPL +YA D H L+ IF+
Sbjct: 351 ALQLPK--KSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFD 405
>gi|386775372|ref|ZP_10097750.1| ribonuclease D [Brachybacterium paraconglomeratum LC44]
Length = 452
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E L + ++ L + L+KE +DWS RPL E YAA+D L+++ ++
Sbjct: 175 ARLLGMERVGLGAVVEDTLGLRLAKEHSAADWSKRPLPESWLVYAALDVEVLVQVRDVLA 234
Query: 214 VKVAQKGNSCSSISEL 229
++ + G + + E
Sbjct: 235 QRLEEAGKADWAAREF 250
>gi|294673634|ref|YP_003574250.1| 3'-5' exonuclease [Prevotella ruminicola 23]
gi|294472246|gb|ADE81635.1| 3'-5' exonuclease [Prevotella ruminicola 23]
Length = 217
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 37/201 (18%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL-PSI 92
++G D E +P + + SLLQ+ S ++ FL L+ I L P++
Sbjct: 47 VLGFDTETRPS-FKKGVHHKCSLLQV--------------STSNCCFLFRLNHIGLCPAV 91
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
K L + K+G ++ D + L +G + ++D+ +
Sbjct: 92 ----KRLLADNTVTKVGLAWRNDALGLHQ--------LGDFEMGEFVDL---------QD 130
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
+ RK+ E +SLA + + +SK Q ++W L + QK YAA DA ++++N F
Sbjct: 131 MARKIGIEDQSLAKLYANVFGERISKREQLTNWERDVLDDHQKRYAATDAWACVQLYNEF 190
Query: 213 QVKVAQKGNSCSSISELDSSN 233
+ + + E+ + N
Sbjct: 191 KRMIENNDYQLVIVPEITTKN 211
>gi|421493809|ref|ZP_15941163.1| RND [Morganella morganii subsp. morganii KT]
gi|455739242|ref|YP_007505508.1| Ribonuclease D [Morganella morganii subsp. morganii KT]
gi|400191853|gb|EJO24995.1| RND [Morganella morganii subsp. morganii KT]
gi|455420805|gb|AGG31135.1| Ribonuclease D [Morganella morganii subsp. morganii KT]
Length = 381
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 39/209 (18%)
Query: 23 THLARALSQSS---LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
THLA Q + + LD E+ R++ +P + L+QL D + ++V
Sbjct: 10 THLAAYCGQVTGKPYLALDTEFVRIRTY---YPHLGLVQL-----------YDGEHLALV 55
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
L ++ W LK L +PD++K +D+ F S GC +P +
Sbjct: 56 DPLGITD------WTPLKTLLAAPDMIKYLHAGSEDI---EVFFNSMGC-----VPQPLV 101
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
D + H + A + + L ++L K +DW RPLTE+Q YAA
Sbjct: 102 DTQVLAAFTGHPL--------SCGFATLVETYLGVTLDKSESRTDWLARPLTEKQCEYAA 153
Query: 200 IDAHCLIEIFNIFQVKVAQKGNSCSSISE 228
D + L+ + KV G S+ E
Sbjct: 154 ADVYYLLPLAEKLTEKVRAAGYLASAEEE 182
>gi|302657746|ref|XP_003020587.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
gi|291184437|gb|EFE39969.1| exosome complex exonuclease Rrp6, putative [Trichophyton verrucosum
HKI 0517]
Length = 881
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+I+L D+G L + +++ H
Sbjct: 309 QVLNEVFADPSIIKVLHGSSMDVIWLQR-------DLG-------LYLVGLFDTFHAAS- 353
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+LPK KSL + E + K+ Q +DW RPL +YA D H L+ IF+
Sbjct: 354 ALQLPK--KSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFD 408
>gi|389740502|gb|EIM81693.1| hypothetical protein STEHIDRAFT_171972 [Stereum hirsutum FP-91666
SS1]
Length = 910
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P I+K+ + D+ +L F L I ++++ H ++
Sbjct: 302 EDLNEVFTDPKIVKIFHGAESDVAWLQQDFN--------------LYIVNLFDTFHASKV 347
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
P+ LA++ + D + K Q +DW RPL +E YA D H L+ I++
Sbjct: 348 -LDFPRH--GLASLLEMYCDFTADKRYQLADWRVRPLPQEMLEYARSDTHFLLYIYD 401
>gi|260431736|ref|ZP_05785707.1| 3'-5' exonuclease [Silicibacter lacuscaerulensis ITI-1157]
gi|260415564|gb|EEX08823.1| 3'-5' exonuclease [Silicibacter lacuscaerulensis ITI-1157]
Length = 204
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 99 LFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLP 158
+ +P++LKL + D+ L F + + ++ L T H
Sbjct: 66 MLENPEVLKLFHFGRFDIAALYHAFGALAAPVYCTKIASRLVRTYTDRH----------- 114
Query: 159 KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
L N+C+ELL I +SK+ Q SDW LTE Q +YAA D L ++ ++ +
Sbjct: 115 ----GLKNLCQELLGIDISKQQQMSDWGAETLTEAQLDYAASDVLYLHQLRAALDARLER 170
Query: 219 KGNS 222
+G +
Sbjct: 171 EGRT 174
>gi|218263130|ref|ZP_03477349.1| hypothetical protein PRABACTJOHN_03030 [Parabacteroides johnsonii
DSM 18315]
gi|423341720|ref|ZP_17319435.1| hypothetical protein HMPREF1077_00865 [Parabacteroides johnsonii
CL02T12C29]
gi|218222915|gb|EEC95565.1| hypothetical protein PRABACTJOHN_03030 [Parabacteroides johnsonii
DSM 18315]
gi|409220608|gb|EKN13563.1| hypothetical protein HMPREF1077_00865 [Parabacteroides johnsonii
CL02T12C29]
Length = 193
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ VG D E +P + ++SL+Q++ +DE+ FL L+ I
Sbjct: 42 LSEFQAVGFDTETRPSFKKGQRY-KISLMQIS----------TDEA----CFLFRLNRID 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+P + L+E + + K+G + D F ++ DI N L
Sbjct: 87 IPKV---LEEFLANEKVQKIGLSLRDD----------------FGAMQKRKDIQPA-NFL 126
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + E SL I L + +SK + S+W L++ QK YAA+DA ++I
Sbjct: 127 DLQNYVGQFGIEDASLQKIYAILFNKKISKGQRLSNWEADVLSDAQKKYAALDAWACLKI 186
Query: 209 FN 210
+N
Sbjct: 187 YN 188
>gi|381204919|ref|ZP_09911990.1| putative 3'-5' exonuclease [SAR324 cluster bacterium JCVI-SC
AAA005]
Length = 222
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
++ L N+C+ELL I +SK+ Q ++W++ LT+ Q YAA D + LI+I++
Sbjct: 118 DSHGLKNLCEELLSIEISKQQQQTNWASPNLTQSQLEYAASDVYHLIDIYH 168
>gi|254994696|ref|ZP_05276886.1| ribonuclease D (rnd) [Anaplasma marginale str. Mississippi]
Length = 386
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 40/221 (18%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWE 94
+ +D E+ RS +PR+ LLQ+A Q G DE LDLS
Sbjct: 28 LAIDTEFV--RSFNDYYPRLCLLQMAYQGGQCVVDVLDER-------LDLSP-------- 70
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
L+E+F I K+ +QDL LS F I FD S+ H +G
Sbjct: 71 -LQEIFDDEGIYKVFHDCRQDLDALSQRFTRLPRPI-FDT-----QTASMLCEYHDNSVG 123
Query: 155 RKLPKETKSLANICKELLDISLSKEL-QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ + ++ L + L+K L + DWS+RPL+E + YA D L E++ +
Sbjct: 124 ---------YSKLVEQFLGVKLNKLLFKRVDWSHRPLSEGKVRYALDDVTYLHELYEVLL 174
Query: 214 VKVAQKG------NSCSSISELDSSNLDLGLKGILEKPDIG 248
+ KG +I+E N D L+G+ P++G
Sbjct: 175 GILTAKGRLTWFLEEMENIAEAFVDNYDSLLEGMDFFPELG 215
>gi|66044808|ref|YP_234649.1| ribonuclease D [Pseudomonas syringae pv. syringae B728a]
gi|63255515|gb|AAY36611.1| Ribonuclease D [Pseudomonas syringae pv. syringae B728a]
Length = 377
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|377561634|ref|ZP_09791077.1| ribonuclease D [Gordonia otitidis NBRC 100426]
gi|377521196|dbj|GAB36242.1| ribonuclease D [Gordonia otitidis NBRC 100426]
Length = 436
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + L + L K +DWS RPL ++ NYAA+D L+E+ + Q
Sbjct: 142 GRLLGVPKVNLAAMVSTFLGLGLQKGHGAADWSRRPLPDDWLNYAALDVEVLVELRDAVQ 201
Query: 214 VKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFK 255
+ + G + E + +L++P +T R++
Sbjct: 202 QALLEAGKDEWAREE---------FRYVLDRPAPAPRTDRWR 234
>gi|195328901|ref|XP_002031150.1| GM25821 [Drosophila sechellia]
gi|194120093|gb|EDW42136.1| GM25821 [Drosophila sechellia]
Length = 532
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SLA + K LD+ + K LQ +DW RPL ++ +YA D H LI ++ + Q+
Sbjct: 17 SLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYERMTNDLLQQQAE 76
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT 266
+ + + D+ K KP IG ++ LD++R T
Sbjct: 77 PGLLGSVYQQSTDV-CKKRYNKPHIGPES-------HLDLVRKT 112
>gi|326332250|ref|ZP_08198530.1| putative ribonuclease D [Nocardioidaceae bacterium Broad-1]
gi|325949956|gb|EGD42016.1| putative ribonuclease D [Nocardioidaceae bacterium Broad-1]
Length = 422
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L L + + +L ++ KE +DWS RPL + YAA+D L+E+
Sbjct: 134 GRLLGYPRVGLGTLVETVLGFTMLKEHSAADWSTRPLPDAWLEYAALDVEVLVELREALA 193
Query: 214 VKVAQKGNSCSSISELD 230
++ +G + E D
Sbjct: 194 AELVAQGKDAWARQEFD 210
>gi|307204165|gb|EFN83006.1| Exonuclease 3'-5' domain-like-containing protein 2 [Harpegnathos
saltator]
Length = 643
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 83/203 (40%), Gaps = 41/203 (20%)
Query: 10 KIHLVTSTESPEF-THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
KI L S E ++ R ++G D EW N VSLLQLA G
Sbjct: 90 KIILADSLEKCDYAVQRIRCDLSEGVLGFDCEW-------VNEGPVSLLQLATFNG---- 138
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
V L + I I + LKEL + ILK+G +D GC
Sbjct: 139 ---------VCALFRIGKIGY--IPDKLKELLSNKRILKVGVASFEDG---QKILKDHGC 184
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--ELQCSDWS 186
+V LDI ++ + +LP KSLA + E L + + K EL+C DW
Sbjct: 185 -----QVSGTLDIRTLAESI-------QLP-SLKSLAAMSLEYLGLEMDKIIELRCGDWE 231
Query: 187 NRPLTEEQKNYAAIDAHCLIEIF 209
LT+EQ YAA DA I I+
Sbjct: 232 ASTLTDEQVTYAACDAIASIFIY 254
>gi|432954565|ref|XP_004085540.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Oryzias latipes]
Length = 623
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 89/209 (42%), Gaps = 39/209 (18%)
Query: 9 LKIHLVTSTESPE--FTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPG-- 64
LK LV+S E + + LS ++GLD EW + S VSLLQ++ G
Sbjct: 89 LKPVLVSSEEEWRQLWPRVQEELSVLPVLGLDCEWVSVKGRASE---VSLLQMSTYSGLC 145
Query: 65 --PRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSST 122
R +VF + PL S ELLK+ P +LK+G +D L+
Sbjct: 146 ALVRL----------LVFRNGQRAFPL-SFVELLKD----PKVLKVGVGCYEDGKRLTR- 189
Query: 123 FCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSK--EL 180
D G L T +L +Q R SL ++ +LL+ SL K EL
Sbjct: 190 ------DHGL-----VLSCTVDLRYLAMRQR-RTAADNGLSLKSLAADLLNFSLDKSPEL 237
Query: 181 QCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+CSDW LT Q YAA DA + +F
Sbjct: 238 RCSDWEADQLTLNQVTYAARDAQVAVALF 266
>gi|334330890|ref|XP_001372295.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase [Monodelphis domestica]
Length = 1391
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 13 LVTSTESPEFTHLAR----ALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
+V S E+ + + LA +LS +++G D EW P + RV+L+QL
Sbjct: 49 IVYSYEANDCSFLAEDIRMSLSDGAVIGFDMEWPPP-FWKGRPGRVALIQLCV------- 100
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
ES + + +S P LK L S I K G L
Sbjct: 101 ---SESKCYLFHIASMSVFP-----RGLKMLLESETIRKAGLGTGDQWKLLRD------- 145
Query: 129 DIGFD-RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDW 185
FD + ++++ S+ N + KE SL + K L L KE ++C W
Sbjct: 146 ---FDVHLRSFVELASLANE-------KLRCKENWSLDGLVKHLFRKCLLKEQSIRCGRW 195
Query: 186 SNRPLTEEQKNYAAIDAH 203
+ PLTE+QK YAAIDA+
Sbjct: 196 EDFPLTEDQKQYAAIDAY 213
>gi|449268441|gb|EMC79305.1| Exosome component 10, partial [Columba livia]
Length = 829
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L D G YL
Sbjct: 303 FIID--TLELRSDMNILNETFTDPAIVKVLHGADSDVEWLQK-------DFGL-----YL 348
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
N Q R L SL ++ K +I K+ Q +DW RPL EE YA
Sbjct: 349 -----VNMFDTHQAARLLNLGRHSLDHLLKLYCNIDADKQYQLADWRIRPLPEEMIQYAR 403
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ + + ++GN
Sbjct: 404 DDTHYLLYIYDKVREALWERGN 425
>gi|440759609|ref|ZP_20938742.1| Ribonuclease D [Pantoea agglomerans 299R]
gi|436426678|gb|ELP24382.1| Ribonuclease D [Pantoea agglomerans 299R]
Length = 373
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLT+ Q YAA D H L+ I + + GN
Sbjct: 117 GFASMVAHFTQVELDKSESRTDWLARPLTQRQCEYAAADVHYLLPIARQLMINTEEAGNM 176
Query: 223 CSSISELDS 231
+++SE D+
Sbjct: 177 AAALSECDN 185
>gi|326384419|ref|ZP_08206099.1| 3'-5' exonuclease [Gordonia neofelifaecis NRRL B-59395]
gi|326196764|gb|EGD53958.1| 3'-5' exonuclease [Gordonia neofelifaecis NRRL B-59395]
Length = 407
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + E L + L+K +DWS RPL ++ NYAA+D L+E+ +
Sbjct: 131 GRLLNIPKVNLAAMVAEFLHLGLAKGHGAADWSRRPLPDDWLNYAALDVEVLVELRDAVA 190
Query: 214 VKVAQKGNSCSSISEL 229
+++ G + E
Sbjct: 191 DALSEAGRDEWAAQEF 206
>gi|85094529|ref|XP_959900.1| hypothetical protein NCU02256 [Neurospora crassa OR74A]
gi|28921357|gb|EAA30664.1| hypothetical protein NCU02256 [Neurospora crassa OR74A]
gi|40804632|emb|CAF05892.1| related to nucleolar 100K polymyositis-scleroderma protein
[Neurospora crassa]
Length = 822
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F +P+I+K+ D+I+L D+G L + +++ H +
Sbjct: 291 EVLNEVFANPNIVKVLHGAFMDVIWLQR-------DLG-------LYVVGLFDTYHACAV 336
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
L +SL + + + K+ Q +DW RPL EE YA D H L+ IF++
Sbjct: 337 ---LGYPGRSLGYLLSKFAEFEADKKYQLADWRIRPLPEEMFYYARSDTHYLLYIFDMI 392
>gi|242775502|ref|XP_002478657.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722276|gb|EED21694.1| 3'-5' exonuclease/helicase (Wrn), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1028
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 47/206 (22%)
Query: 26 ARALSQSSLVGLDAEWKPQRSHQSNF-PRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
A S S ++G D EW+PQ S VSL+Q+A N + L +
Sbjct: 786 AALFSASEVLGFDIEWRPQAQTTSGIKSNVSLIQIA--------------NEERIGLFHI 831
Query: 85 SSIPLPSIWEL----LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
+ I +L L++L S +K+G K D CS RV +L
Sbjct: 832 ALFRGNEIHDLVPPSLRQLLESTTTVKVGVSIKAD--------CS--------RVRRHLG 875
Query: 141 IT--SIYNHLHHKQL---GRKLPK----ETKSLANICKELLDISLSK--ELQCSDWSNRP 189
I S++ H +L G PK T +LA +E+L + L K +++ SDW+ +P
Sbjct: 876 INTRSLFELSHLYKLVKYGTTQPKLVDRRTVNLAQQVEEVLGLPLKKDGDVRKSDWT-KP 934
Query: 190 LTEEQKNYAAIDAHCLIEIFNIFQVK 215
L Q YAA DA+ I + +VK
Sbjct: 935 LDYAQVQYAASDAYACICLHRTLEVK 960
>gi|70987206|ref|XP_749082.1| 3'-5' exonuclease/helicase (Wrn) [Aspergillus fumigatus Af293]
gi|66846712|gb|EAL87044.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus fumigatus
Af293]
gi|159123147|gb|EDP48267.1| 3'-5' exonuclease/helicase (Wrn), putative [Aspergillus fumigatus
A1163]
Length = 419
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 32/200 (16%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFP-RVSLLQLACQPGPRFNPESDESNASVVFLLD 83
+A+ ++G D EWKPQ S ++ VSL+Q+A NA + L
Sbjct: 181 VAKYFLNDHVIGFDMEWKPQSSRSASIQNNVSLIQIA--------------NAERIALFQ 226
Query: 84 LSSI-----PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPY 138
++ P I L+++ S +I K G K D L + +G + V
Sbjct: 227 IALFKPARRPEDFISPSLRKILESSEITKAGVAIKADCTRLKNF-------LGIN-VRGI 278
Query: 139 LDITSIYNHLHHKQLGRKL-PKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQK 195
+++ +Y + + Q L + + +L+ +E + L+K +++C DW+ L Q
Sbjct: 279 FELSHLYKLVKYCQSDPALINRRSVNLSEQVEEHFGLPLAKDDDVRCGDWTT-ALNYRQV 337
Query: 196 NYAAIDAHCLIEIFNIFQVK 215
YAA D++ + +FN K
Sbjct: 338 QYAATDSYACLCLFNTMDAK 357
>gi|387886998|ref|YP_006317297.1| ribonuclease D [Francisella noatunensis subsp. orientalis str. Toba
04]
gi|386871814|gb|AFJ43821.1| ribonuclease D [Francisella noatunensis subsp. orientalis str. Toba
04]
Length = 165
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
SL + K++LDI + KE Q SDW RPL+++Q +YA D LIE+
Sbjct: 62 SLKALLKDILDIEMEKESQFSDWRKRPLSQKQFDYALKDVEHLIEV 107
>gi|422676385|ref|ZP_16735715.1| ribonuclease D [Pseudomonas syringae pv. aceris str. M302273]
gi|330974089|gb|EGH74155.1| ribonuclease D [Pseudomonas syringae pv. aceris str. M302273]
Length = 377
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|171679581|ref|XP_001904737.1| hypothetical protein [Podospora anserina S mat+]
gi|170939416|emb|CAP64644.1| unnamed protein product [Podospora anserina S mat+]
Length = 628
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 87 IPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYN 146
+P E+L E+F P I+K+ D+++L D+G + + +++
Sbjct: 64 VPWRHRLEVLNEVFADPGIVKVFHGAFMDVVWLQR-------DLG-------VYVVGLFD 109
Query: 147 HLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
H + L SLA + K+ + K Q +DW RPL E YA D H L+
Sbjct: 110 THHASTV---LGYGGGSLAFLLKKFVGFEADKRWQLADWRIRPLPAEMLYYARADTHYLL 166
Query: 207 EIFNIFQVKVAQKGNSC 223
++++ + +A ++
Sbjct: 167 YVYDMIRNDLAAAAHTV 183
>gi|170040469|ref|XP_001848020.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864104|gb|EDS27487.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 302
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 30/191 (15%)
Query: 35 VGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP-LPSIW 93
+ D EW S Q+ RV+L+QL + V +L +S + LP+
Sbjct: 128 IAFDLEWP--FSFQTGPGRVALMQLCAE-------------TDVCYLFQVSCLKKLPAA- 171
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
L +L P + G K D L+ F + +E +D+ YN +H
Sbjct: 172 --LLQLLNHPRVCLHGVNVKNDFRKLARDFPEANAE---RMIEQCVDLGQWYNRIHGTT- 225
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
+ + + +C+ L IS +K+++ S W PL+++QK YAAID + EI+ Q
Sbjct: 226 --GIWSMERLVLQVCQ--LRISKNKKVRMSKWHVLPLSDDQKLYAAIDVYIGQEIYLKLQ 281
Query: 214 VK---VAQKGN 221
K +AQ+ N
Sbjct: 282 AKELQLAQEEN 292
>gi|433631783|ref|YP_007265411.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070010]
gi|432163376|emb|CCK60784.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070010]
Length = 440
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 148 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 207
Query: 223 CSSISELD 230
+ E +
Sbjct: 208 NWAAQEFE 215
>gi|390434792|ref|ZP_10223330.1| ribonuclease D [Pantoea agglomerans IG1]
Length = 373
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLT+ Q YAA D H L+ I + + GN
Sbjct: 117 GFASMVAHFTQVELDKSESRTDWLARPLTQRQCEYAAADVHYLLPIARQLMINTEEAGNM 176
Query: 223 CSSISELDS 231
+++SE D+
Sbjct: 177 AAALSECDN 185
>gi|224370825|ref|YP_002604989.1| Rnd [Desulfobacterium autotrophicum HRM2]
gi|223693542|gb|ACN16825.1| Rnd [Desulfobacterium autotrophicum HRM2]
Length = 377
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+LK +F P I K ++ S F + D FD + N +
Sbjct: 66 VLKPVFEDPAITK---------VFHGSDFDIRSLDRDFD--------IHVNNLFDTEIAC 108
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L + +SLA + ++ D++L K Q +DWS RPL++E Y+ D L+E+ +I +
Sbjct: 109 RFLGIQKRSLAALLEKHFDLTLDKRFQKTDWSRRPLSKEMIAYSVNDVAYLLELSDILKK 168
Query: 215 KVAQKG 220
++ +G
Sbjct: 169 RLEDEG 174
>gi|304396155|ref|ZP_07378037.1| ribonuclease D [Pantoea sp. aB]
gi|304356524|gb|EFM20889.1| ribonuclease D [Pantoea sp. aB]
Length = 373
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLT+ Q YAA D H L+ I + + GN
Sbjct: 117 GFASMVAHFTQVELDKSESRTDWLARPLTQRQCEYAAADVHYLLPIARQLMINTEEAGNM 176
Query: 223 CSSISELDS 231
+++SE D+
Sbjct: 177 AAALSECDN 185
>gi|126658688|ref|ZP_01729833.1| hypothetical protein CY0110_32040 [Cyanothece sp. CCY0110]
gi|126619950|gb|EAZ90674.1| hypothetical protein CY0110_32040 [Cyanothece sp. CCY0110]
Length = 662
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
++L R LP + SL + L SL K LQ SDW +PLT+EQ YAA DA ++ + +
Sbjct: 191 QELNRNLPG-SYSLMRVAARELGYSLDKSLQVSDWG-KPLTQEQLQYAANDAAVVLPLRD 248
Query: 211 IFQVKVAQ 218
F+ K+ +
Sbjct: 249 TFRSKIIE 256
>gi|167970096|ref|ZP_02552373.1| conserved alanine rich protein [Mycobacterium tuberculosis H37Ra]
gi|254551737|ref|ZP_05142184.1| hypothetical protein Mtube_14982 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294994226|ref|ZP_06799917.1| 3'-5' exonuclease [Mycobacterium tuberculosis 210]
gi|297732285|ref|ZP_06961403.1| 3'-5' exonuclease [Mycobacterium tuberculosis KZN R506]
gi|313659618|ref|ZP_07816498.1| 3'-5' exonuclease [Mycobacterium tuberculosis KZN V2475]
gi|385991968|ref|YP_005910266.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385995589|ref|YP_005913887.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|424948339|ref|ZP_18364035.1| hypothetical protein NCGM2209_2986 [Mycobacterium tuberculosis
NCGM2209]
gi|339295543|gb|AEJ47654.1| hypothetical protein CCDC5079_2464 [Mycobacterium tuberculosis
CCDC5079]
gi|339299161|gb|AEJ51271.1| hypothetical protein CCDC5180_2434 [Mycobacterium tuberculosis
CCDC5180]
gi|358232854|dbj|GAA46346.1| hypothetical protein NCGM2209_2986 [Mycobacterium tuberculosis
NCGM2209]
gi|379028990|dbj|BAL66723.1| hypothetical protein ERDMAN_2943 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
Length = 404
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 114 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 173
Query: 223 CSSISELD 230
+ E +
Sbjct: 174 DWAAQEFE 181
>gi|424066641|ref|ZP_17804105.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|440719626|ref|ZP_20900051.1| ribonuclease D [Pseudomonas syringae BRIP34876]
gi|440728871|ref|ZP_20909073.1| ribonuclease D [Pseudomonas syringae BRIP34881]
gi|443644899|ref|ZP_21128749.1| Ribonuclease D [Pseudomonas syringae pv. syringae B64]
gi|408002098|gb|EKG42362.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|440360654|gb|ELP97917.1| ribonuclease D [Pseudomonas syringae BRIP34881]
gi|440367480|gb|ELQ04542.1| ribonuclease D [Pseudomonas syringae BRIP34876]
gi|443284916|gb|ELS43921.1| Ribonuclease D [Pseudomonas syringae pv. syringae B64]
Length = 377
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|441517701|ref|ZP_20999435.1| putative ribonuclease D [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441455575|dbj|GAC57396.1| putative ribonuclease D [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 396
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L +LA + E L + L+K +DWS+RPL ++ NYAA+D L+E+ +
Sbjct: 112 GRLLNLPKVNLAAMVAEFLQLGLAKGHGAADWSHRPLPDDWLNYAALDVEVLVELRDAMH 171
Query: 214 VKVAQKG 220
+ + G
Sbjct: 172 SALDEAG 178
>gi|194376518|dbj|BAG57405.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|119775068|ref|YP_927808.1| ribonuclease D [Shewanella amazonensis SB2B]
gi|119767568|gb|ABM00139.1| ribonuclease D [Shewanella amazonensis SB2B]
Length = 371
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 53/297 (17%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
L+ H V E+ T L SQS L+ LD E+ R++ + ++ L+Q+
Sbjct: 2 LEFHYVKDDEA--LTALVDQYSQSRLLVLDTEFVRTRTY---YAKLGLIQV--------- 47
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
D + +++ LD+ L W LL +P+ILKL +DL F G
Sbjct: 48 --YDGNTLALIDPLDIQD--LSGFWALL----TNPNILKLVHSCSEDL----EVFARYG- 94
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSL--ANICKELLDISLSKELQCSDWS 186
+V+P T +++ Q+ L L A + +E L +L K +DW
Sbjct: 95 -----KVQP----TPLFD----SQIAAALSGMGHGLGYAKLVEECLGQTLDKGESRTDWI 141
Query: 187 NRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPD 246
RPLT+ Q YAA D L +++ + K+ G + E + L +G L++P+
Sbjct: 142 KRPLTDAQLQYAANDVFYLYQLYPQLEQKLKTLGRFDWVLEE--GARLT---EGRLQRPE 196
Query: 247 IGNKTVRFKLCEALDIIRATSYYSQCLP----EGVVSRVSYLNTMPMDESLVKIVRK 299
T K+ A + Y + L E + R L + D +L+ + +K
Sbjct: 197 AA--TAYLKVKNAFQLTPKQLAYLKVLAAWRLERALDRDLALGFVIKDHALIALAKK 251
>gi|441508350|ref|ZP_20990274.1| putative ribonuclease [Gordonia aichiensis NBRC 108223]
gi|441447378|dbj|GAC48235.1| putative ribonuclease [Gordonia aichiensis NBRC 108223]
Length = 432
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L + +LA + L + L K +DWS RPL ++ NYAA+D L+E+ + Q
Sbjct: 138 GRLLGEPKVNLAAMVATHLGLGLQKGHGAADWSRRPLPDDWLNYAALDVEVLVELRDAVQ 197
Query: 214 VKVAQKG 220
+ + G
Sbjct: 198 AALIEAG 204
>gi|406861057|gb|EKD14113.1| 3 -5 exonuclease helicase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1248
Score = 47.4 bits (111), Expect = 0.011, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 5 YRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPG 64
Y P ++H S ++ E L + + ++G D EWK ++ ++ +VSL+Q+A +
Sbjct: 295 YDSP-RVHYCKSLQTSE-KALKEHFTDAKVIGFDIEWK-EKGLRTARDQVSLVQIASE-- 349
Query: 65 PRFNPESDESNASVVFLLDLSSIPLPS------IWELLKELFVSPDILKLGFKFKQDLIY 118
S + L+ +++ P+ + LK++ P I+K+G K D
Sbjct: 350 ------------SRIALMHVAAFPVKDGVRKDLVPPTLKKIMEDPSIIKVGVAIKGDCTR 397
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR--KLPKETKSLANICKELLDISL 176
+ +G D ++++ +Y + + + + SLA KE L + +
Sbjct: 398 VKRW-------LGIDS-RSLIELSHLYKLVKFSRSKEFASINRTLVSLATQTKEHLHLPM 449
Query: 177 SK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
K E++ SDW +PLT EQ YAA D++ +++++ ++K
Sbjct: 450 FKGEVRISDW-RQPLTMEQVQYAASDSYAGLQLYHTLEMK 488
>gi|390603116|gb|EIN12508.1| hypothetical protein PUNSTDRAFT_97267 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 870
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E L E+F P I+K+ + D+ +L F + + +++ H ++
Sbjct: 317 EELNEVFTDPRIVKVFHGAESDIQWLQQDFN--------------VFVVGLFDTFHASKV 362
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
P+ LA++ + D K Q +DW RPL +E +YA D H L+ I++ +
Sbjct: 363 -LHFPRH--GLASLLEMYCDFIADKRYQLADWRIRPLPQEMLDYARSDTHYLLYIYDHLR 419
Query: 214 VKVAQKGNS 222
+ ++G S
Sbjct: 420 HALLERGTS 428
>gi|308187080|ref|YP_003931211.1| RNase D [Pantoea vagans C9-1]
gi|308057590|gb|ADO09762.1| RNase D, processes tRNA precursor [Pantoea vagans C9-1]
Length = 373
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLT+ Q YAA D H L+ I + + GN
Sbjct: 117 GFASMVAHFTQVELDKSESRTDWLARPLTQRQCEYAAADVHYLLPIARQLMINTEEAGNM 176
Query: 223 CSSISELDS 231
+++SE D+
Sbjct: 177 AAALSECDN 185
>gi|289706235|ref|ZP_06502598.1| putative ribonuclease D [Micrococcus luteus SK58]
gi|289557074|gb|EFD50402.1| putative ribonuclease D [Micrococcus luteus SK58]
Length = 416
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + +ELL ++L+KE +DWS RPL E YAA+D L+ + ++ G
Sbjct: 137 GLAAVLEELLGVTLAKEHSAADWSVRPLPEAMLAYAALDVELLVPLREALIARLEADGKL 196
Query: 223 CSSISELD 230
+ E +
Sbjct: 197 AWAEQEFE 204
>gi|392543604|ref|ZP_10290741.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
piscicida JCM 20779]
Length = 376
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
AN+ K+L D+ + K +DW RPLT+ Q +YAA D + L+ F Q +V +K
Sbjct: 118 FANMVKQLRDVDIDKSESRTDWLRRPLTQSQLDYAASDVYHLLPCFETIQARVNEK 173
>gi|167516320|ref|XP_001742501.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779125|gb|EDQ92739.1| predicted protein [Monosiga brevicollis MX1]
Length = 880
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGF-DRVEPYLDITSIYNHLHHKQLG 154
+++L SP ++ + +++ S + G D+ D V D Y + + L
Sbjct: 729 MEQLLTSPRLVGIDTEWRSPRPTCSLIQVAMGDDVFLLDAVPGMGDAAYAYEVVDVQPLA 788
Query: 155 RKLPKETK--SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ + K L + +L +L K QCS+W RPL +Q YAAIDA CL ++
Sbjct: 789 QSWLQRKKRPGLGTVVAAVLGQTLDKRNQCSNWDRRPLRPDQAEYAAIDAWCLAPLY 845
>gi|120403469|ref|YP_953298.1| 3'-5' exonuclease [Mycobacterium vanbaalenii PYR-1]
gi|119956287|gb|ABM13292.1| 3'-5' exonuclease [Mycobacterium vanbaalenii PYR-1]
Length = 426
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL + L+K +DWS RPL ++ NYAA+D L+++ +
Sbjct: 142 GRLANYERVNLAAMVQRLLGLQLTKGHGAADWSKRPLPQDWLNYAALDVEVLVDLRHAIS 201
Query: 214 VKVAQKGNSCSSISELD 230
+ ++G + E +
Sbjct: 202 EVLQEQGKEGWAAEEFE 218
>gi|409200732|ref|ZP_11228935.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
flavipulchra JG1]
Length = 376
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
AN+ K+L D+ + K +DW RPLT+ Q +YAA D + L+ F Q +V +K
Sbjct: 118 FANMVKQLRDVDIDKSESRTDWLRRPLTQSQLDYAASDVYHLLPCFETIQARVNEK 173
>gi|340627682|ref|YP_004746134.1| hypothetical protein MCAN_27071 [Mycobacterium canettii CIPT
140010059]
gi|433627798|ref|YP_007261427.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140060008]
gi|433642868|ref|YP_007288627.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070008]
gi|340005872|emb|CCC45038.1| conserved hypothetical alanine rich protein [Mycobacterium canettii
CIPT 140010059]
gi|432155404|emb|CCK52654.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140060008]
gi|432159416|emb|CCK56720.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070008]
Length = 438
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 148 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 207
Query: 223 CSSISELD 230
+ E +
Sbjct: 208 DWAAQEFE 215
>gi|422664872|ref|ZP_16724745.1| ribonuclease D [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330975291|gb|EGH75357.1| ribonuclease D [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 377
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|402846843|ref|ZP_10895152.1| 3'-5' exonuclease [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402267535|gb|EJU16930.1| 3'-5' exonuclease [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 186
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 39/206 (18%)
Query: 6 RKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGP 65
R P I ++ + E E +A L ++ ++G+D E +P + + VSLLQ+A +
Sbjct: 3 RCPAPITIIETRE--EARRVAMRLRRAGILGIDTETRPSFTAGVRY-EVSLLQIATE--- 56
Query: 66 RFNPESDESNASVVFLLDLSSIPLP-SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFC 124
FL L+ + LP S+ LL++ P I+K+G + D+ LS
Sbjct: 57 -----------EECFLFRLNKMGLPKSLISLLED----PAIIKVGLSLRDDITALSR--- 98
Query: 125 SQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSD 184
+ G ++++ + ++LG L I L +SK + SD
Sbjct: 99 REAFTPG-----SFVELQKLCGGYGIRELG---------LQKIYAILFAERMSKSQRMSD 144
Query: 185 WSNRPLTEEQKNYAAIDAHCLIEIFN 210
W + L+ Q +YAA+DA + I+
Sbjct: 145 WEAKKLSPAQAHYAALDAWASLRIYT 170
>gi|297635289|ref|ZP_06953069.1| 3'-5' exonuclease [Mycobacterium tuberculosis KZN 4207]
Length = 416
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 126 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 185
Query: 223 CSSISELD 230
+ E +
Sbjct: 186 DWAAQEFE 193
>gi|189182142|gb|ACD81847.1| LD13130p [Drosophila melanogaster]
Length = 930
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SLA + K LD+ + K LQ +DW RPL ++ +YA D H LI ++ + Q+
Sbjct: 415 SLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYGRMTNDLLQQHAE 474
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT 266
+ + + D+ K KP IG ++ LD++R T
Sbjct: 475 PGLLGSVYQQSTDV-CKKRYNKPHIGPES-------HLDLVRKT 510
>gi|302776536|ref|XP_002971426.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
gi|300160558|gb|EFJ27175.1| hypothetical protein SELMODRAFT_95804 [Selaginella moellendorffii]
Length = 512
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 35/191 (18%)
Query: 20 PEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVV 79
P +A L SS + +D E RS Q V L+Q+ S S +V
Sbjct: 231 PALETMAAKLHASSEIAVDLENHHYRSFQGF---VCLMQV-----------STRSQDFIV 276
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
L L S I +L+ +F +P I K+ +D+++L F C++ FD
Sbjct: 277 DTLVLRS----HIGPVLRSVFANPSIRKVIHGSDRDILWLQRDFGIYVCNL-FDT----- 326
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
Q R L E LA + + ++ K Q +DW RPL+ E YA
Sbjct: 327 -----------GQAARVLRMERFGLAFLLQTFCGVTPDKRYQLADWRLRPLSAEMLKYAR 375
Query: 200 IDAHCLIEIFN 210
D H L+ +++
Sbjct: 376 EDTHYLLYVYD 386
>gi|91079648|ref|XP_968350.1| PREDICTED: similar to Cuticular protein 47Ef CG13214-PA [Tribolium
castaneum]
Length = 1009
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 157 LPKETK----SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LP E + SL + + L L K Q S+W RPL Q YAA+DA+CLIE++++
Sbjct: 748 LPYEVQGSGPSLGTLVNQCLGRPLDKSDQFSNWEKRPLRNSQLVYAALDAYCLIEVYDVI 807
Query: 213 Q 213
+
Sbjct: 808 K 808
>gi|383792210|gb|AFH41845.1| FI19715p1 [Drosophila melanogaster]
Length = 930
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SLA + K LD+ + K LQ +DW RPL ++ +YA D H LI ++ + Q+
Sbjct: 415 SLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYGRMTNDLLQQHAE 474
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT 266
+ + + D+ K KP IG ++ LD++R T
Sbjct: 475 PGLLGSVYQQSTDV-CKKRYNKPHIGPES-------HLDLVRKT 510
>gi|302187116|ref|ZP_07263789.1| ribonuclease D [Pseudomonas syringae pv. syringae 642]
Length = 377
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|302501205|ref|XP_003012595.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
gi|291176154|gb|EFE31955.1| exosome complex exonuclease Rrp6, putative [Arthroderma benhamiae
CBS 112371]
Length = 1069
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+I+L D+G L + +++ H
Sbjct: 493 QVLNEVFADPSIIKVLHGSSMDVIWLQR-------DLG-------LYLVGLFDTFHAAS- 537
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+LPK KSL + E + K+ Q +DW RPL +YA D H L+ IF+
Sbjct: 538 ALQLPK--KSLKFLLHEYVGFDADKQYQTADWRIRPLLAGMLDYARSDTHFLLYIFD 592
>gi|423347256|ref|ZP_17324943.1| hypothetical protein HMPREF1060_02615 [Parabacteroides merdae
CL03T12C32]
gi|409218513|gb|EKN11484.1| hypothetical protein HMPREF1060_02615 [Parabacteroides merdae
CL03T12C32]
Length = 193
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIP 88
LS+ VG D E +P + ++SL+Q++ +DE+ FL L+ I
Sbjct: 42 LSEFQSVGFDTETRPSFKKGQRY-KISLMQIS----------TDEA----CFLFRLNRIG 86
Query: 89 LPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHL 148
+P E L+E + + K+G + D F + DI N L
Sbjct: 87 IP---EALEEFLANEKVQKIGLSLRDD----------------FGAMRKRTDIQPA-NFL 126
Query: 149 HHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ + E SL I L + +SK + S+W L++ QK YAA+DA ++I
Sbjct: 127 DLQNYVGQFGIEDASLQKIYAILFNKKISKGQRLSNWEADILSDAQKKYAALDAWACLKI 186
Query: 209 FN 210
+N
Sbjct: 187 YN 188
>gi|119717898|ref|YP_924863.1| 3'-5' exonuclease [Nocardioides sp. JS614]
gi|119538559|gb|ABL83176.1| 3'-5' exonuclease [Nocardioides sp. JS614]
Length = 442
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR L LA + + LL L+KE DWS RPL E YAA+D L E+ ++
Sbjct: 146 GRLLGYPRVGLATLVETLLGSRLAKEHSAVDWSTRPLPEPWLEYAALDVEVLAELRDLLA 205
Query: 214 VKVAQKGNSCSSISELDS 231
++ G + + E D+
Sbjct: 206 DELETAGKAEWARQEFDA 223
>gi|405969148|gb|EKC34144.1| Exosome component 10, partial [Crassostrea gigas]
Length = 309
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 36/201 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E + + L + +V +D E RS Q L+Q+ S A+ F
Sbjct: 19 ELSSVIDKLRKEHIVAVDLEHHSYRSFQGI---TCLMQI--------------STATDDF 61
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
L+D ++ L + L E+F P ++K+ D+ +L D+G
Sbjct: 62 LID--TLALRNDLSPLNEIFTHPAVVKVFHGADSDIDWLQR-------DLGL-------- 104
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ N Q R L SLA++ + D+ K+ Q +DW RPL E YA
Sbjct: 105 --YVVNMFDTGQAARVLNHSRFSLAHLMEHYCDVITDKQYQLADWRIRPLPAELMKYARE 162
Query: 201 DAHCLIEIFNIFQVKVAQKGN 221
D H L I+ + ++ +GN
Sbjct: 163 DTHYLTYIYQRMKQELLARGN 183
>gi|424071287|ref|ZP_17808713.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407999220|gb|EKG39607.1| ribonuclease D [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 377
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q +YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|161078302|ref|NP_001097795.1| Rrp6 [Drosophila melanogaster]
gi|158030263|gb|AAF55107.3| Rrp6 [Drosophila melanogaster]
Length = 900
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SLA + K LD+ + K LQ +DW RPL ++ +YA D H LI ++ + Q+
Sbjct: 385 SLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYGRMTNDLLQQHAE 444
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT 266
+ + + D+ K KP IG ++ LD++R T
Sbjct: 445 PGLLGSVYQQSTDV-CKKRYNKPHIGPES-------HLDLVRKT 480
>gi|119592084|gb|EAW71678.1| exosome component 10, isoform CRA_b [Homo sapiens]
Length = 884
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLEMWERGN 484
>gi|289570857|ref|ZP_06451084.1| conserved alanine rich protein [Mycobacterium tuberculosis T17]
gi|289544611|gb|EFD48259.1| conserved alanine rich protein [Mycobacterium tuberculosis T17]
Length = 443
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 178 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 237
Query: 223 CSSISELD 230
+ E +
Sbjct: 238 DWAAQEFE 245
>gi|149915004|ref|ZP_01903533.1| ribonuclease D [Roseobacter sp. AzwK-3b]
gi|149811192|gb|EDM71029.1| ribonuclease D [Roseobacter sp. AzwK-3b]
Length = 385
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 42/210 (20%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESD 72
L T+ + +F AR Q V +D E+ +R++ + ++ L+QLA P +
Sbjct: 4 LTTTEQLEQFCTRAR---QFDYVTVDTEFLRERTY---YSKLCLVQLAV-------PGTG 50
Query: 73 ESNASVVFLL--DLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDI 130
+A +V L DLS PL +LF ++K+ +QDL F G
Sbjct: 51 AEDAVLVDPLAGDLSMAPL-------YDLFRDESVVKVFHAARQDLEIF---FVDAGVIP 100
Query: 131 G--FDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
FD + + + ++ L RK+ KE L K + +DWS R
Sbjct: 101 APLFD-TQVTAMVCGFGEQVGYETLVRKIAKE--------------QLDKTSRFTDWSRR 145
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQ 218
PLT+ QK YA D L +I+ K+AQ
Sbjct: 146 PLTDAQKKYALADVTHLRDIYEFLARKLAQ 175
>gi|347761830|ref|YP_004869391.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
gi|347580800|dbj|BAK85021.1| ribonuclease D [Gluconacetobacter xylinus NBRC 3288]
Length = 215
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
+ LAN+C+ELL + LSK+ Q SDW LT EQ YAA D L ++ V + ++
Sbjct: 121 DRHGLANLCRELLGVELSKQQQSSDWGAPDLTREQLCYAASDVLYLHALWAKLDVLLHRE 180
Query: 220 GNSCSSISELD 230
G + + D
Sbjct: 181 GRRAMAQACFD 191
>gi|308473314|ref|XP_003098882.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
gi|308268021|gb|EFP11974.1| hypothetical protein CRE_31359 [Caenorhabditis remanei]
Length = 860
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 25/137 (18%)
Query: 80 FLLDLSSIPLPSIWE---LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVE 136
F++D P P +W+ +L E F +P ILK+ D+++L F ++ FD
Sbjct: 318 FIID----PFP-MWDCIGILNEPFTNPKILKVFHGADNDVLWLQRDFGIHIVNL-FD--- 368
Query: 137 PYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKN 196
++ K+L K PK SLA + D+ L K+ Q +DW RPL N
Sbjct: 369 ---------TYVAMKKL--KYPK--FSLAYLAFRFADVILDKQYQLADWRARPLRNAMIN 415
Query: 197 YAAIDAHCLIEIFNIFQ 213
YA D H L+ +++ +
Sbjct: 416 YAREDTHYLLYSYDMLR 432
>gi|308232210|ref|ZP_07664029.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu001]
gi|308371097|ref|ZP_07667091.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu003]
gi|308374662|ref|ZP_07667838.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu006]
gi|308375511|ref|ZP_07668042.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu007]
gi|308378065|ref|ZP_07668659.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu009]
gi|308379281|ref|ZP_07668932.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu010]
gi|308380440|ref|ZP_07669197.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu011]
gi|308214618|gb|EFO74017.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu001]
gi|308329844|gb|EFP18695.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu003]
gi|308341104|gb|EFP29955.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu006]
gi|308346112|gb|EFP34963.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu007]
gi|308353627|gb|EFP42478.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu009]
gi|308357474|gb|EFP46325.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu010]
gi|308361428|gb|EFP50279.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu011]
Length = 468
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 178 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 237
Query: 223 CSSISELD 230
+ E +
Sbjct: 238 DWAAQEFE 245
>gi|15609818|ref|NP_217197.1| Conserved hypothetical alanine rich protein [Mycobacterium
tuberculosis H37Rv]
gi|15842219|ref|NP_337256.1| ribonuclease D [Mycobacterium tuberculosis CDC1551]
gi|148662522|ref|YP_001284045.1| ribonuclease D [Mycobacterium tuberculosis H37Ra]
gi|148823871|ref|YP_001288625.1| hypothetical protein TBFG_12696 [Mycobacterium tuberculosis F11]
gi|253798237|ref|YP_003031238.1| hypothetical protein TBMG_01292 [Mycobacterium tuberculosis KZN
1435]
gi|254232787|ref|ZP_04926114.1| conserved hypothetical alanine rich protein [Mycobacterium
tuberculosis C]
gi|254365342|ref|ZP_04981387.1| conserved hypothetical alanine rich protein [Mycobacterium
tuberculosis str. Haarlem]
gi|289444223|ref|ZP_06433967.1| conserved alanine rich protein [Mycobacterium tuberculosis T46]
gi|289448336|ref|ZP_06438080.1| conserved alanine rich protein [Mycobacterium tuberculosis CPHL_A]
gi|289575379|ref|ZP_06455606.1| conserved alanine rich protein [Mycobacterium tuberculosis K85]
gi|289746482|ref|ZP_06505860.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289751333|ref|ZP_06510711.1| conserved alanine rich protein [Mycobacterium tuberculosis T92]
gi|289754783|ref|ZP_06514161.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|308369826|ref|ZP_07419200.2| conserved alanine rich protein [Mycobacterium tuberculosis SUMu002]
gi|308372367|ref|ZP_07428406.2| conserved alanine rich protein [Mycobacterium tuberculosis SUMu004]
gi|308373474|ref|ZP_07432469.2| conserved alanine rich protein [Mycobacterium tuberculosis SUMu005]
gi|308377095|ref|ZP_07441113.2| conserved alanine rich protein [Mycobacterium tuberculosis SUMu008]
gi|308405939|ref|ZP_07494488.2| conserved alanine rich protein [Mycobacterium tuberculosis SUMu012]
gi|339632693|ref|YP_004724335.1| hypothetical protein MAF_26850 [Mycobacterium africanum GM041182]
gi|375295504|ref|YP_005099771.1| hypothetical protein TBSG_01303 [Mycobacterium tuberculosis KZN
4207]
gi|383308448|ref|YP_005361259.1| 3'-5' exonuclease [Mycobacterium tuberculosis RGTB327]
gi|385999461|ref|YP_005917760.1| hypothetical protein MTCTRI2_2733 [Mycobacterium tuberculosis
CTRI-2]
gi|392387313|ref|YP_005308942.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|392431712|ref|YP_006472756.1| hypothetical protein TBXG_001283 [Mycobacterium tuberculosis KZN
605]
gi|397674590|ref|YP_006516125.1| ribonuclease D [Mycobacterium tuberculosis H37Rv]
gi|422813730|ref|ZP_16862102.1| alanine rich protein [Mycobacterium tuberculosis CDC1551A]
gi|424805019|ref|ZP_18230450.1| conserved alanine rich protein [Mycobacterium tuberculosis W-148]
gi|13882508|gb|AAK47070.1| ribonuclease D, putative [Mycobacterium tuberculosis CDC1551]
gi|124601846|gb|EAY60856.1| conserved hypothetical alanine rich protein [Mycobacterium
tuberculosis C]
gi|134150855|gb|EBA42900.1| conserved hypothetical alanine rich protein [Mycobacterium
tuberculosis str. Haarlem]
gi|148506674|gb|ABQ74483.1| putative ribonuclease D [Mycobacterium tuberculosis H37Ra]
gi|148722398|gb|ABR07023.1| conserved alanine rich protein [Mycobacterium tuberculosis F11]
gi|253319740|gb|ACT24343.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN
1435]
gi|289417142|gb|EFD14382.1| conserved alanine rich protein [Mycobacterium tuberculosis T46]
gi|289421294|gb|EFD18495.1| conserved alanine rich protein [Mycobacterium tuberculosis CPHL_A]
gi|289539810|gb|EFD44388.1| conserved alanine rich protein [Mycobacterium tuberculosis K85]
gi|289687010|gb|EFD54498.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289691920|gb|EFD59349.1| conserved alanine rich protein [Mycobacterium tuberculosis T92]
gi|289695370|gb|EFD62799.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|308326264|gb|EFP15115.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu002]
gi|308333435|gb|EFP22286.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu004]
gi|308337502|gb|EFP26353.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu005]
gi|308348930|gb|EFP37781.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu008]
gi|308365086|gb|EFP53937.1| conserved alanine rich protein [Mycobacterium tuberculosis SUMu012]
gi|323718676|gb|EGB27838.1| alanine rich protein [Mycobacterium tuberculosis CDC1551A]
gi|326904295|gb|EGE51228.1| conserved alanine rich protein [Mycobacterium tuberculosis W-148]
gi|328458009|gb|AEB03432.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN
4207]
gi|339332049|emb|CCC27755.1| conserved hypothetical alanine rich protein [Mycobacterium
africanum GM041182]
gi|344220508|gb|AEN01139.1| hypothetical protein MTCTRI2_2733 [Mycobacterium tuberculosis
CTRI-2]
gi|378545864|emb|CCE38142.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|380722401|gb|AFE17510.1| 3'-5' exonuclease [Mycobacterium tuberculosis RGTB327]
gi|392053121|gb|AFM48679.1| conserved alanine rich protein [Mycobacterium tuberculosis KZN 605]
gi|395139495|gb|AFN50654.1| ribonuclease D [Mycobacterium tuberculosis H37Rv]
gi|440582158|emb|CCG12561.1| putative ALANINE RICH protein [Mycobacterium tuberculosis 7199-99]
gi|444896218|emb|CCP45479.1| Conserved hypothetical alanine rich protein [Mycobacterium
tuberculosis H37Rv]
Length = 438
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 148 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 207
Query: 223 CSSISELD 230
+ E +
Sbjct: 208 DWAAQEFE 215
>gi|58698542|ref|ZP_00373443.1| 3'-5' exonuclease [Wolbachia endosymbiont of Drosophila ananassae]
gi|58534924|gb|EAL59022.1| 3'-5' exonuclease [Wolbachia endosymbiont of Drosophila ananassae]
Length = 234
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ SL +C ELLD L+K+ Q SDW N LT++QK+YAA D L I
Sbjct: 141 DNHSLKELCLELLDTKLNKQQQSSDWGNENLTDKQKSYAASDVLYLHRI 189
>gi|404421224|ref|ZP_11002947.1| ribonuclease D [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
gi|403659237|gb|EJZ13893.1| ribonuclease D [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
Length = 420
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +LA + + LL + L K +DWS RPL E NYAA+D L+E+ +
Sbjct: 140 GRLAGFERVNLAAMVQRLLGLQLMKGHGAADWSKRPLPPEWLNYAALDVEVLLELRHAVA 199
Query: 214 VKVAQKGNSCSSISELD 230
+ ++G + + E +
Sbjct: 200 AVLEEQGKTDWAAQEFE 216
>gi|397641401|gb|EJK74630.1| hypothetical protein THAOC_03681 [Thalassiosira oceanica]
Length = 819
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
L+ C+ L L K QCSDW RPLT EQ+ YAA+DA I++ + + A K
Sbjct: 764 LSRSCEIYLGKKLDKNEQCSDWLARPLTIEQREYAALDAWACASIYHEMRQRKATK 819
>gi|393243266|gb|EJD50781.1| hypothetical protein AURDEDRAFT_159928 [Auricularia delicata
TFB-10046 SS5]
Length = 837
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F +I+K+ + D+++L F L I ++++ H ++
Sbjct: 318 LAEVFADENIVKVFHGAESDIVWLQQDFS--------------LYIVNLFDTYHASKV-L 362
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
+ PK SLA++ + D + K Q +DW RP+ E YA D H L+ I++ +
Sbjct: 363 EFPKH--SLASLLEAYTDFTPDKRYQLADWRIRPIPAEMLLYARSDTHFLLHIYDKLREL 420
Query: 216 VAQKGNSCSSI 226
+ Q+ + + +
Sbjct: 421 LLQRSSGTADL 431
>gi|166240642|ref|XP_645586.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
gi|165988709|gb|EAL71650.2| 3'-5' exonuclease [Dictyostelium discoideum AX4]
Length = 1195
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
FL+D ++ L S +L ++F +P I+K+ D+ +L F
Sbjct: 296 FLID--TLLLRSHIHMLNQVFTNPSIVKVLHGSDSDIKWLQRDFG--------------- 338
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
I N Q R L + SLA + K I +K+ Q +DW R L EE YA
Sbjct: 339 --VYIVNMFDTGQASRILEYPSASLAFLLKFYCAIDANKKYQLADWRIRKLPEEMIKYAR 396
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ + ++ KGN
Sbjct: 397 EDTHYLLYIYDRLRNELISKGN 418
>gi|354617195|ref|ZP_09034673.1| 3'-5' exonuclease, partial [Saccharomonospora paurometabolica YIM
90007]
gi|353218454|gb|EHB83215.1| 3'-5' exonuclease, partial [Saccharomonospora paurometabolica YIM
90007]
Length = 282
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E +L + + LL L K +DWS RPL E NYAA+D L+ + +
Sbjct: 131 GRLAGYERVALGTLVETLLGYRLEKGHSAADWSRRPLPAEWLNYAALDVELLVPLRGKLE 190
Query: 214 VKVAQKGNSCSSISELDSSN 233
++A +G + E +++
Sbjct: 191 AELAGQGKLDWAHQEFEAAR 210
>gi|395521908|ref|XP_003765056.1| PREDICTED: exosome component 10 [Sarcophilus harrisii]
Length = 992
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
+L E F P I+K+ D+ +L F + N Q
Sbjct: 458 ILNESFTDPAIVKVFHGADMDIEWLQKDFG-----------------LYVVNMFDTHQAA 500
Query: 155 RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQV 214
R L SL ++ K ++ +K+ Q +DW RPL EE NYA D H L+ I++ +
Sbjct: 501 RILNLGRHSLDHLLKLYCNVETNKQYQLADWRIRPLPEEMFNYARHDTHYLLYIYDKMRS 560
Query: 215 KVAQKGN 221
+ ++ N
Sbjct: 561 DLWERAN 567
>gi|422619719|ref|ZP_16688406.1| ribonuclease D [Pseudomonas syringae pv. japonica str. M301072]
gi|330900086|gb|EGH31505.1| ribonuclease D [Pseudomonas syringae pv. japonica str. M301072]
Length = 377
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W L L +PD++K+ +DL L S P D +L+
Sbjct: 65 WRPLSALLENPDVIKVVHACSEDLEVLLRLTGSLPV--------PLFDTQLAAAYLN--- 113
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG + + + +E+LDI L K SDW RPL+E Q YAA DA L E+F I
Sbjct: 114 LGFSM-----GYSRLVQEVLDIDLPKGETRSDWLQRPLSETQITYAAEDAVHLAELFTIL 168
Query: 213 QVKVA 217
+ +++
Sbjct: 169 RPRLS 173
>gi|330993409|ref|ZP_08317344.1| Ribonuclease D [Gluconacetobacter sp. SXCC-1]
gi|329759439|gb|EGG75948.1| Ribonuclease D [Gluconacetobacter sp. SXCC-1]
Length = 215
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
+ LAN+C+ELL + LSK+ Q SDW LT EQ YAA D L ++ + + ++
Sbjct: 121 DRHGLANLCRELLGVELSKQQQSSDWGATDLTREQLCYAASDVLYLHALWERLEALLHRE 180
Query: 220 G 220
G
Sbjct: 181 G 181
>gi|298526151|ref|ZP_07013560.1| 3'-5' exonuclease [Mycobacterium tuberculosis 94_M4241A]
gi|298495945|gb|EFI31239.1| 3'-5' exonuclease [Mycobacterium tuberculosis 94_M4241A]
Length = 375
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 148 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 207
Query: 223 CSSISELD 230
+ E +
Sbjct: 208 DWAAQEFE 215
>gi|194383644|dbj|BAG59180.1| unnamed protein product [Homo sapiens]
Length = 679
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|68490669|ref|XP_710857.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432110|gb|EAK91613.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 785
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E + + L +S+ + +D E RS+ + V L+Q++ N E D ++
Sbjct: 240 ELQKMVQELKKSTEIAVDLEHHDYRSY---YGIVCLMQIS-------NREQDWIIDTLAL 289
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
DL+ +L E+F PDI+K+ D+I+L D+G L
Sbjct: 290 RDDLT---------VLNEVFADPDIVKVFHGAFMDIIWLQR-------DLG-------LY 326
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ S+++ H R L SLA + + SK+ Q +DW RPL+ YA
Sbjct: 327 VVSLFDTFH---ASRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRIRPLSPPMLAYARS 383
Query: 201 DAHCLIEIFNIFQVKV 216
D H L+ I++ + K+
Sbjct: 384 DTHFLLFIYDQLKNKL 399
>gi|291414300|ref|XP_002723398.1| PREDICTED: exosome component 10 [Oryctolagus cuniculus]
Length = 886
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S LL E +P I+K+ D+ +L F
Sbjct: 335 FIID--TLELRSEMYLLNESLTNPTIVKVFHGADSDIEWLQKDFG--------------- 377
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + K+ Q +DW RPL EE +YA
Sbjct: 378 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVDSDKQYQLADWRIRPLPEEMLSYAR 435
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 436 DDTHYLLYIYDRMRLELWERGN 457
>gi|163746426|ref|ZP_02153784.1| ribonuclease D [Oceanibulbus indolifex HEL-45]
gi|161380311|gb|EDQ04722.1| ribonuclease D [Oceanibulbus indolifex HEL-45]
Length = 385
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 35/219 (15%)
Query: 15 TSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDES 74
T T + + ++ V +D E+ +R++ + ++ L+QLA P +D+S
Sbjct: 3 TITTTADLAQFCEEAARYDYVTVDTEFLRERTY---YSKLCLVQLAM-------PGTDDS 52
Query: 75 NASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDL--IYLSSTFCSQGCDIGF 132
NA +V L I L E L LF ++K+ +QDL ++ +
Sbjct: 53 NAVLVDPL-AEGISL----EPLYTLFRDTSVVKVFHAARQDLEIFFVDAEVFP------- 100
Query: 133 DRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTE 192
EP D T + + G ++ ET + +++ +L K + +DWS RPLT+
Sbjct: 101 ---EPLFD-TQVAAMVCG--FGEQVGYET-----LVRKIAHQALDKTSRFTDWSRRPLTD 149
Query: 193 EQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDS 231
QK YA D L +I+ K+ + G + EL++
Sbjct: 150 AQKTYALADVTHLRQIYEFLARKLEETGRARWVAEELET 188
>gi|433635744|ref|YP_007269371.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070017]
gi|432167337|emb|CCK64848.1| Conserved protein of unknown function, alanine rich [Mycobacterium
canettii CIPT 140070017]
Length = 438
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
+LA + + LL + L+K +DWS RPL NYAA+D LIE+ +A++G +
Sbjct: 148 NLAAMVERLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKT 207
Query: 223 CSSISELD 230
+ E +
Sbjct: 208 DWAAQEFE 215
>gi|372277826|ref|ZP_09513862.1| ribonuclease D [Pantoea sp. SL1_M5]
Length = 373
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
A++ + L K +DW RPLT+ Q YAA D H L+ I + + GN
Sbjct: 117 GFASMVAHFTQVELDKSESRTDWLARPLTQRQCEYAAADVHYLLPIARQLMINTEEAGNM 176
Query: 223 CSSISELDS 231
+++SE D+
Sbjct: 177 SAALSECDN 185
>gi|357508795|ref|XP_003624686.1| Exosome complex exonuclease rrp6 [Medicago truncatula]
gi|355499701|gb|AES80904.1| Exosome complex exonuclease rrp6 [Medicago truncatula]
Length = 832
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+++F+ P K+ +D+++L F C++ FD Q R
Sbjct: 355 LRDVFMDPTKKKVLHGADRDIVWLQRDFGIYICNM-FDT----------------GQASR 397
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ + ++ +KE Q +DW RPL + Y D H L+ I+++ ++K
Sbjct: 398 VLKMERYSLQHLLQHFCGVTANKEYQNADWRARPLPDVMIKYGREDTHYLLYIYDLMRIK 457
Query: 216 V 216
+
Sbjct: 458 L 458
>gi|146421793|ref|XP_001486840.1| hypothetical protein PGUG_00217 [Meyerozyma guilliermondii ATCC
6260]
Length = 755
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH-HKQL 153
+L E+F +P+I+K+ D+I+L D+G L + S+++ H K+L
Sbjct: 288 VLNEIFANPNIVKVFHGAFMDIIWLQR-------DLG-------LYVVSLFDTYHASKKL 333
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
G LP+ SLA + + + SK+ Q +DW RPL +YA D H L+ +++ +
Sbjct: 334 G--LPR--FSLAYLLENYANFKTSKKYQLADWRMRPLLGPMLSYARSDTHFLLYVYDQLR 389
Query: 214 VKVAQKGN 221
++ G+
Sbjct: 390 NQLLSSGS 397
>gi|126328720|ref|XP_001364275.1| PREDICTED: exosome component 10 isoform 2 [Monodelphis domestica]
Length = 836
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 314 FIID--TLELRSDLYILNESFTDPSIVKVFHGADMDIEWLQKDFG--------------- 356
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 357 --LYVVNMFDTHQAARILNLGRHSLDHLLKLYCNVESNKQYQLADWRIRPLPEEMFNYAR 414
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ + + + N
Sbjct: 415 HDTHYLLYIYDKMRSDLWDRAN 436
>gi|380302273|ref|ZP_09851966.1| ribonuclease D [Brachybacterium squillarum M-6-3]
Length = 428
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSC 223
L + +E L +SL+KE +DWS RPL YAA+D L+++ + + ++ + G
Sbjct: 155 LGAVVEETLGLSLAKEHSAADWSKRPLPAAWLVYAALDVEVLVQVRDELERRLREAGKHE 214
Query: 224 SSISELD 230
+++E +
Sbjct: 215 WALAEFE 221
>gi|4505917|ref|NP_002676.1| exosome component 10 isoform 2 [Homo sapiens]
gi|179283|gb|AAB59352.1| PM-Scl autoantigen [Homo sapiens]
gi|11136976|emb|CAC15569.1| PM-scl autoantigen [Homo sapiens]
Length = 860
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|332807618|ref|XP_001136533.2| PREDICTED: exosome component 10 isoform 4 [Pan troglodytes]
Length = 909
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLEMWERGN 484
>gi|71051605|ref|NP_001012748.1| exosome component 10 [Gallus gallus]
Length = 910
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L D G YL
Sbjct: 356 FIID--TLELRSDMSILNETFTDPAIVKVLHGADSDVEWLQK-------DFGL-----YL 401
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
N Q R L SL ++ K + K+ Q +DW RPL EE YA
Sbjct: 402 -----VNMFDTHQAARLLNLGKHSLDHLLKLYCSVDADKQYQLADWRIRPLPEEMIQYAR 456
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ + + ++GN
Sbjct: 457 DDTHYLLYIYDKMREALWERGN 478
>gi|307212494|gb|EFN88225.1| Exosome component 10 [Harpegnathos saltator]
Length = 804
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 19/153 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S +L+D ++ L S L E+F P ILK+ G D
Sbjct: 218 STVDTDYLID--TLILRSELHQLNEIFTKPTILKVF----------------HGADFDIQ 259
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
++ L + + N Q ++L SLA + K+ +I+ +K Q +DW RPL EE
Sbjct: 260 WLQRDLSLY-VVNMFDTHQAAKQLNFPYLSLAFLLKKYCNINPNKHFQLADWRIRPLPEE 318
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
YA D H L+ I ++ + ++ + N S+I
Sbjct: 319 LMKYAREDTHYLLHIKDMLKNELIELANGQSNI 351
>gi|238879034|gb|EEQ42672.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 786
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E + + L +S+ + +D E RS+ + V L+Q++ N E D ++
Sbjct: 240 ELQKMVQELKKSTEIAVDLEHHDYRSY---YGIVCLMQIS-------NREQDWIIDTLAL 289
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
DL+ +L E+F PDI+K+ D+I+L D+G L
Sbjct: 290 RDDLT---------VLNEVFADPDIVKVFHGAFMDIIWLQR-------DLG-------LY 326
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ S+++ H R L SLA + + SK+ Q +DW RPL+ YA
Sbjct: 327 VVSLFDTFH---ASRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRIRPLSPPMLAYARS 383
Query: 201 DAHCLIEIFNIFQVKV 216
D H L+ I++ + K+
Sbjct: 384 DTHFLLFIYDQLKNKL 399
>gi|119592083|gb|EAW71677.1| exosome component 10, isoform CRA_a [Homo sapiens]
Length = 899
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLEMWERGN 484
>gi|83855386|ref|ZP_00948916.1| exonuclease, putative [Sulfitobacter sp. NAS-14.1]
gi|83941910|ref|ZP_00954372.1| exonuclease, putative [Sulfitobacter sp. EE-36]
gi|83843229|gb|EAP82396.1| exonuclease, putative [Sulfitobacter sp. NAS-14.1]
gi|83847730|gb|EAP85605.1| exonuclease, putative [Sulfitobacter sp. EE-36]
Length = 204
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLH 149
P++ LL++ P +LKL + D+ L +TF ++ + ++ L T H
Sbjct: 61 PNLCALLED----PHVLKLFHYGRFDIAALLNTFGAKAAPVYCTKIASRLVRTYTDRH-- 114
Query: 150 HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
LA +C+ELL + +SK+ Q SDW LT+ Q +YAA D L ++
Sbjct: 115 -------------GLAKLCQELLSVDISKQQQSSDWGAETLTKAQIDYAASDVLHLHKLR 161
Query: 210 NIFQVKVAQKG 220
++ + ++G
Sbjct: 162 DVLNQMLIREG 172
>gi|68490644|ref|XP_710869.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
gi|46432124|gb|EAK91626.1| likely nuclear exosome component Rrp6p [Candida albicans SC5314]
Length = 786
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 36/196 (18%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
E + + L +S+ + +D E RS+ + V L+Q++ N E D ++
Sbjct: 240 ELQKMVQELKKSTEIAVDLEHHDYRSY---YGIVCLMQIS-------NREQDWIIDTLAL 289
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
DL+ +L E+F PDI+K+ D+I+L D+G L
Sbjct: 290 RDDLT---------VLNEVFADPDIVKVFHGAFMDIIWLQR-------DLG-------LY 326
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
+ S+++ H R L SLA + + SK+ Q +DW RPL+ YA
Sbjct: 327 VVSLFDTFH---ASRALGFPRFSLAYLLEVYAHFKTSKQYQLADWRIRPLSPPMLAYARS 383
Query: 201 DAHCLIEIFNIFQVKV 216
D H L+ I++ + K+
Sbjct: 384 DTHFLLFIYDQLKNKL 399
>gi|426327783|ref|XP_004024690.1| PREDICTED: exosome component 10 [Gorilla gorilla gorilla]
Length = 909
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLEMWERGN 484
>gi|77362412|ref|YP_341986.1| RNase D, processing tRNA s [Pseudoalteromonas haloplanktis TAC125]
gi|76877323|emb|CAI89540.1| putative RNase D, processing tRNA precursors [Pseudoalteromonas
haloplanktis TAC125]
Length = 376
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 164 LANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF--QVKVAQKGN 221
A + K LLDI + K ++W RPLT +Q YAA DA+ L+ FN+ VK A N
Sbjct: 118 FALMVKTLLDIEIDKSESRTNWLQRPLTNKQLEYAAADAYHLLPCFNLIIDSVKAADLFN 177
Query: 222 SCSSISELDSSNLDLGLKGILEKPDIGN 249
S SEL ++ + L DI N
Sbjct: 178 IVISESELVANKREFQTPDELLYKDIKN 205
>gi|385652990|ref|ZP_10047543.1| ribonuclease D [Leucobacter chromiiresistens JG 31]
Length = 396
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E L I + LL I+L K +DWS RPL E YAA+D L E+ ++
Sbjct: 115 ARLLGFERVGLGAIVEMLLGIALEKAHSAADWSQRPLPAEWLEYAALDVVLLPELRSVIA 174
Query: 214 VKVAQKGNSCSSISELDSSNL 234
++ ++G + + E ++ L
Sbjct: 175 EQLDEQGKTEFAAQEFEAVRL 195
>gi|354565264|ref|ZP_08984439.1| cell division FtsK/SpoIIIE [Fischerella sp. JSC-11]
gi|353549223|gb|EHC18665.1| cell division FtsK/SpoIIIE [Fischerella sp. JSC-11]
Length = 849
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 13/72 (18%)
Query: 152 QLGRKLPKETKSLANI-----CKELLDI-SLSKELQCSDWSNRPLTEEQKNYAAIDA--- 202
+L RK+ ++ ++N+ KEL ++ KE Q SDW RPLT++Q NYAA+D
Sbjct: 108 KLARKINRKVLQVSNLQLKTLAKELCHFYNVDKEEQASDWGQRPLTQKQLNYAAMDTVYL 167
Query: 203 ----HCLIEIFN 210
CL++I+N
Sbjct: 168 AAVHRCLLDIYN 179
>gi|410256430|gb|JAA16182.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|397503016|ref|XP_003822132.1| PREDICTED: exosome component 10 [Pan paniscus]
Length = 909
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLEMWERGN 484
>gi|242042163|ref|XP_002468476.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
gi|241922330|gb|EER95474.1| hypothetical protein SORBIDRAFT_01g046585 [Sorghum bicolor]
Length = 702
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 17/124 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E F P K+ +D+++L F C++ FD Q R
Sbjct: 216 LQEPFKDPTKRKVMHGADRDIMWLQRDFHIYVCNL-FDT----------------GQASR 258
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ ++ KE Q +DW +RPL +E YA D H L+ I+++ + +
Sbjct: 259 VLQMERNSLEHLLLHFCGVTAKKEYQNADWRSRPLPDEMIKYAREDTHYLLYIYDLMRQR 318
Query: 216 VAQK 219
+ ++
Sbjct: 319 LQKE 322
>gi|410215484|gb|JAA04961.1| exosome component 10 [Pan troglodytes]
Length = 890
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|333377065|ref|ZP_08468801.1| hypothetical protein HMPREF9456_00396 [Dysgonomonas mossii DSM
22836]
gi|332886278|gb|EGK06522.1| hypothetical protein HMPREF9456_00396 [Dysgonomonas mossii DSM
22836]
Length = 197
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 45/218 (20%)
Query: 12 HLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ----RSHQSNFPRVSLLQLACQPGPRF 67
++ E E LS+ +G D E +P +HQ ++L+QL
Sbjct: 21 RIIVIQEETEAKKACDYLSKCEAIGFDTETRPAFRKGVTHQ-----IALMQL-------- 67
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
S FL L+ I P+ L EL V+P + K+G K D
Sbjct: 68 ------STIDTCFLFRLNLIGFPAC---LAELLVNPAVKKIGLSLKDD------------ 106
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
F + + + N + + + E L I L + +SK + S+W
Sbjct: 107 ----FSAIHKRMSLAPA-NFVELQSFVKDYGIEDNGLQRIYGILFEKRISKGQRLSNWEV 161
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSS 225
L++ QK YAA+DA + I+N ++K +K NS S
Sbjct: 162 DVLSDSQKMYAALDAWACLRIYN--ELKNKEKINSVRS 197
>gi|365824673|ref|ZP_09366747.1| hypothetical protein HMPREF0045_00383 [Actinomyces graevenitzii
C83]
gi|365259733|gb|EHM89718.1| hypothetical protein HMPREF0045_00383 [Actinomyces graevenitzii
C83]
Length = 424
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L +E + L ++ ++ L L+KE +DWS RPL NYAA+D LI++ +
Sbjct: 122 ARILGREKRGLGHLIEDTLGWHLAKEHSAADWSVRPLPTSWLNYAALDVELLIDLRSALL 181
Query: 214 VKVAQKGNSCSSISELD 230
++ G +++E +
Sbjct: 182 TELELAGKLQWALAEFE 198
>gi|126328718|ref|XP_001364197.1| PREDICTED: exosome component 10 isoform 1 [Monodelphis domestica]
Length = 861
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 314 FIID--TLELRSDLYILNESFTDPSIVKVFHGADMDIEWLQKDFG--------------- 356
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE NYA
Sbjct: 357 --LYVVNMFDTHQAARILNLGRHSLDHLLKLYCNVESNKQYQLADWRIRPLPEEMFNYAR 414
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ + + + N
Sbjct: 415 HDTHYLLYIYDKMRSDLWDRAN 436
>gi|344943543|ref|ZP_08782830.1| ribonuclease D [Methylobacter tundripaludum SV96]
gi|344260830|gb|EGW21102.1| ribonuclease D [Methylobacter tundripaludum SV96]
Length = 389
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ L + + + LD E+ ++++ +P+ LLQ+A PE +
Sbjct: 13 QLVKLCEQIKKEPWLALDTEFLREKTY---YPKFCLLQIA-------TPE---------W 53
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
+ + I LPS+ ++L E SP I+K+ +QDL F + EP D
Sbjct: 54 VACIDPIALPSL-DILFEAIYSPSIVKVFHSCRQDL----EIFYQLTGKLP----EPLFD 104
Query: 141 ITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAI 200
T I L Q E A + LL+++L+K +DWS RPL + + YAA
Sbjct: 105 -TQIAAPLLGFQ-------ENPGYAMLVSSLLNVNLNKAHTRADWSKRPLIDAEIQYAAD 156
Query: 201 DAHCLIEIFNIFQVKVAQKGNS 222
D L +I+ + K+A+ G +
Sbjct: 157 DVIYLCKIYQMMLQKLAELGRA 178
>gi|296815198|ref|XP_002847936.1| exosome component 3'-5' exonuclease [Arthroderma otae CBS 113480]
gi|238840961|gb|EEQ30623.1| ribosomal RNA processing 3'-5' exonuclease [Arthroderma otae CBS
113480]
Length = 810
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P I+K+ D+I+L D+G L + +++ H +
Sbjct: 309 QVLNEVFADPSIVKVLHGSSMDVIWLQR-------DLG-------LYLVGLFDTFHAASM 354
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+LPK KSL + ++ + K+ Q +DW RPL +YA D H L+ IF+
Sbjct: 355 -LQLPK--KSLKFLLQQYVGFDADKQYQTADWRIRPLLPGMLDYARSDTHFLLYIFD 408
>gi|195570818|ref|XP_002103401.1| GD20396 [Drosophila simulans]
gi|194199328|gb|EDX12904.1| GD20396 [Drosophila simulans]
Length = 896
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SLA + K LD+ + K LQ +DW RPL ++ +YA D H LI ++ + Q+
Sbjct: 385 SLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYERMTNDLLQQQAE 444
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT 266
+ + + D+ K KP IG ++ LD++R T
Sbjct: 445 PGLLGSVYQQSTDV-CKKRYNKPHIGPES-------HLDLVRKT 480
>gi|50301240|ref|NP_001001998.1| exosome component 10 isoform 1 [Homo sapiens]
gi|8928564|sp|Q01780.2|EXOSX_HUMAN RecName: Full=Exosome component 10; AltName: Full=Autoantigen
PM/Scl 2; AltName: Full=P100 polymyositis-scleroderma
overlap syndrome-associated autoantigen; AltName:
Full=Polymyositis/scleroderma autoantigen 100 kDa;
Short=PM/Scl-100; AltName: Full=Polymyositis/scleroderma
autoantigen 2
gi|35555|emb|CAA46904.1| PM/Scl 100kD nucleolar protein [Homo sapiens]
gi|25140242|gb|AAH39901.1| Exosome component 10 [Homo sapiens]
gi|49257470|gb|AAH73788.1| Exosome component 10 [Homo sapiens]
gi|119592085|gb|EAW71679.1| exosome component 10, isoform CRA_c [Homo sapiens]
gi|190690525|gb|ACE87037.1| exosome component 10 protein [synthetic construct]
gi|190691893|gb|ACE87721.1| exosome component 10 protein [synthetic construct]
gi|261858988|dbj|BAI46016.1| exosome component 10 [synthetic construct]
Length = 885
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|355744909|gb|EHH49534.1| hypothetical protein EGM_00210 [Macaca fascicularis]
Length = 887
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLELWERGN 484
>gi|297282176|ref|XP_001103657.2| PREDICTED: exosome component 10-like isoform 3 [Macaca mulatta]
Length = 884
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLELWERGN 484
>gi|397620769|gb|EJK65900.1| hypothetical protein THAOC_13202, partial [Thalassiosira oceanica]
Length = 999
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG 154
L+ LF+ + LGF F D I L S++ +Q ++ +LD+ I
Sbjct: 881 FLQWLFLENEAFLLGFSFNHD-IKLISSYIAQEIEVNGR----FLDLQLICAQFMPDGAR 935
Query: 155 RKLPKETKSLANICKELLDIS----LSKELQCSDWSNRPLTEEQKNYAA 199
LP S + + ++ LSKE QCSDW+ RPL+ +Q YA
Sbjct: 936 SHLPGLQSSCSFFTRSIMHGGEQWVLSKEFQCSDWARRPLSTDQLAYAG 984
>gi|332250403|ref|XP_003274341.1| PREDICTED: exosome component 10 [Nomascus leucogenys]
Length = 912
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 362 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 404
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 405 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 462
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 463 DDTHYLLYIYDKMRLELWERGN 484
>gi|67970274|dbj|BAE01480.1| unnamed protein product [Macaca fascicularis]
Length = 673
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGNS 222
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGNG 461
>gi|429849634|gb|ELA24996.1| exosome complex exonuclease [Colletotrichum gloeosporioides Nara
gc5]
Length = 908
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L ++F P+I+K+ D+I+L D+G V D LH+ Q
Sbjct: 327 QVLNQVFADPNIVKVFHGSYMDIIWLQR-------DLGL-YVNGLFDTFYACEALHYPQ- 377
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
KSLA + + + K Q +DW RPL+ E YA D H L+ +++ +
Sbjct: 378 --------KSLAFLLSKFANFDADKRYQMADWRMRPLSPEMLYYARSDTHYLLYVYDKVR 429
Query: 214 ---VKVAQKGNSCSSISE 228
V + +GN ++ E
Sbjct: 430 NELVMKSDRGNPGTNYIE 447
>gi|398390487|ref|XP_003848704.1| hypothetical protein MYCGRDRAFT_76687 [Zymoseptoria tritici IPO323]
gi|339468579|gb|EGP83680.1| hypothetical protein MYCGRDRAFT_76687 [Zymoseptoria tritici IPO323]
Length = 796
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L E+F +P I+K+ D I+L D+G YL + H + LG
Sbjct: 286 LNEVFANPTIVKVLHGAFMDAIWLQR-------DLGL-----YL-VGLFDTHYACRALGY 332
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
SLA + K+ D+ K+ Q +DW RPL +E +YA D H L+ IF+ + +
Sbjct: 333 A----GGSLAFLLKKFADVDAQKQHQMADWRVRPLPKELFDYARSDTHYLLYIFDCMRNE 388
Query: 216 VAQKGN 221
+ ++ +
Sbjct: 389 LIERSD 394
>gi|410215482|gb|JAA04960.1| exosome component 10 [Pan troglodytes]
gi|410256428|gb|JAA16181.1| exosome component 10 [Pan troglodytes]
gi|410289248|gb|JAA23224.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|410350403|gb|JAA41805.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|343962561|dbj|BAK62868.1| exosome component 10 [Pan troglodytes]
Length = 885
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLEMWERGN 460
>gi|425768291|gb|EKV06818.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
Pd1]
gi|425770373|gb|EKV08846.1| Exosome complex exonuclease Rrp6, putative [Penicillium digitatum
PHI26]
Length = 754
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ- 152
++L E+F P ILK+ D+I+L D+G L + +++ H
Sbjct: 285 QILNEVFADPKILKVLHGSTMDIIWLQR-------DLG-------LYVVGMFDTFHAASA 330
Query: 153 LGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
LG PK +SL + + ++ K Q +DW RPL +YA D H L+ I++
Sbjct: 331 LG--FPK--RSLKFLLSKFVNFEADKRYQTADWRARPLPPAMFDYARSDTHYLLYIYDRL 386
Query: 213 QVKVAQKGNSCSSISELDSSN 233
+ + NS S +D N
Sbjct: 387 RNDLID--NSTEEASHIDYVN 405
>gi|356514085|ref|XP_003525737.1| PREDICTED: LOW QUALITY PROTEIN: exosome component 10-like [Glycine
max]
Length = 429
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
SI L+E+F K+ D+++L F C++ FD
Sbjct: 134 SIGPYLREVFKDLSNRKVMHGADNDVMWLQRDFGIYICNL-FDT---------------- 176
Query: 151 KQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
Q + L E +SL + DI+ +KE Q +DW RPL E YA D H L+ I++
Sbjct: 177 HQASKVLKLERRSLKYLLCHFCDITANKEYQSADWRLRPLPYEMVRYAREDTHYLLYIYD 236
Query: 211 IFQVKVAQKGNSCSSI 226
+ ++++ N S+
Sbjct: 237 LMRIELFSMLNEPESV 252
>gi|320157018|ref|YP_004189397.1| ribonuclease D [Vibrio vulnificus MO6-24/O]
gi|319932330|gb|ADV87194.1| ribonuclease D [Vibrio vulnificus MO6-24/O]
Length = 390
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 44/221 (19%)
Query: 17 TESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNA 76
TE+ + + ++ +V LD E+ R++ +P++ L+QL D
Sbjct: 26 TENQDLVRVCSKAREADVVMLDTEFVRTRTY---YPQLGLIQL-----------FDGDTL 71
Query: 77 SVV---FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S++ L D+S+ EL ++K+ +DL + F +
Sbjct: 72 SLIDPTVLTDMSA---------FTELLNDASVMKVLHACGEDLEVFHNAFGAIPV----- 117
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
P +D + L H + A + ++ L++ L K +DW RPL+++
Sbjct: 118 ---PMVDTQIMAAFLGHGL--------STGFAALVEQYLNVELDKSESRTDWLARPLSDK 166
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKG--NSCSSISELDSS 232
Q YAA D H L+ ++ I KV + G + SEL +S
Sbjct: 167 QLEYAAADVHYLLPLYEILLEKVMEAGWWQAAQQESELQAS 207
>gi|85373619|ref|YP_457681.1| ribonuclease D [Erythrobacter litoralis HTCC2594]
gi|84786702|gb|ABC62884.1| ribonuclease D [Erythrobacter litoralis HTCC2594]
Length = 401
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 9 LKIH-LVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRF 67
+KIH L+T T + L L+Q V +D E+ + ++ +P + L+Q+
Sbjct: 1 MKIHDLITDTAT--LAELCDRLAQHEFVCIDTEFMRENTY---WPELCLIQIG------- 48
Query: 68 NPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQG 127
++E A+V L D I L + +L+ E + DILK+ QD+ + +
Sbjct: 49 ---NEEEAAAVDPLAD--GIDLQPLLDLMCE---NEDILKVFHAGGQDVEIVYNLTGKTP 100
Query: 128 CDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSN 187
I FD + I+ +Q+G AN+ + L+ ++ K + +DWS
Sbjct: 101 FPI-FDTQIAMMAIS------QSEQIG---------YANLVESWLNKTIDKGARFTDWSR 144
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELD 230
RPLT+ Q YA D L +IF K+ + G +E+D
Sbjct: 145 RPLTDRQIEYAIGDVTYLAKIFPKILNKLVKTGRGAWLNAEMD 187
>gi|404214776|ref|YP_006668971.1| Ribonuclease D [Gordonia sp. KTR9]
gi|403645575|gb|AFR48815.1| Ribonuclease D [Gordonia sp. KTR9]
Length = 425
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 19/138 (13%)
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
++GF+ VE Y + GR L +LA + E L + L K +DWS R
Sbjct: 118 ELGFECVELY----------DTELAGRLLGLAKVNLAAMVAEFLGLGLLKGHGAADWSRR 167
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PL +E NYAA+D L+E+ + +A +G + E IL +P
Sbjct: 168 PLPDEWLNYAALDVEVLVELRDAMDAALAAEGKDGWAREEFAY---------ILTRPPAP 218
Query: 249 NKTVRFKLCEALDIIRAT 266
+T R++ + +++T
Sbjct: 219 PRTDRWRKTSNIHTVKST 236
>gi|392590505|gb|EIW79834.1| ribonuclease H-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 429
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 36/238 (15%)
Query: 35 VGLDAEWKPQRSHQSN----FPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLP 90
+G D EW P R +N R +L+QL C D+ ++ + +S P
Sbjct: 119 LGFDMEW-PYRQATANSEEYVGRTALVQL-C----------DKRTILLIQVSAMSQFP-- 164
Query: 91 SIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHH 150
+ + E+ +P I+K G D LS F + C++ VE +
Sbjct: 165 ---QKVAEVIKNPSIVKTGVHIMNDGEKLSREFSIRACNL----VE-----LGMMAKAAD 212
Query: 151 KQLGRKLPKETKSLANICKELLDISLSK-ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+ K P+ +L + + L +L+K E + SDW++ L ++Q+ YAA D H ++
Sbjct: 213 DRFSGKYPRRVVALDKVVEMYLSKTLAKGEERTSDWTS-VLDDKQQEYAANDVHSSCLVY 271
Query: 210 NIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRATS 267
+ + +A + N +S L LD+GL + D + ++ ++ R TS
Sbjct: 272 HRL-LSIAVEANKAIDMSAL---RLDVGLSNNPKSLDDAERQAEWQAASTNNVSRQTS 325
>gi|257068547|ref|YP_003154802.1| ribonuclease D [Brachybacterium faecium DSM 4810]
gi|256559365|gb|ACU85212.1| ribonuclease D [Brachybacterium faecium DSM 4810]
Length = 399
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L E L + ++ L + L+KE +DWS RPL E YAA+D L+E+ ++ +
Sbjct: 122 ARLLGMERVGLGAVVEDTLGLRLAKEHSAADWSRRPLPEGWLTYAALDVEVLVEVRDVLR 181
Query: 214 VKV 216
++
Sbjct: 182 ERL 184
>gi|336467546|gb|EGO55710.1| hypothetical protein NEUTE1DRAFT_86290 [Neurospora tetrasperma FGSC
2508]
gi|350287803|gb|EGZ69039.1| hypothetical protein NEUTE2DRAFT_115146 [Neurospora tetrasperma
FGSC 2509]
Length = 825
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F P+I+K+ D+I+L D+G L + +++ H +
Sbjct: 291 EVLNEVFADPNIVKVLHGAFMDVIWLQR-------DLG-------LYVVGLFDTYHACAV 336
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIF 212
L +SL + + + K+ Q +DW RPL EE YA D H L+ IF++
Sbjct: 337 ---LGYPGRSLGYLLSKFAEFEADKKYQLADWRIRPLPEEMFYYARSDTHYLLYIFDMI 392
>gi|300176795|emb|CBK25364.2| unnamed protein product [Blastocystis hominis]
Length = 287
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 29 LSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF---LLDLS 85
L ++VG DAEW Q +S++QL + N +++ LLD
Sbjct: 8 LLHETVVGFDAEWT-----QKAINPLSIIQLTFR------------NVNIIIQVPLLD-- 48
Query: 86 SIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCD-IGFDRVEPYLDITSI 144
+P PS+ ++K+ ILK G +D C++ C +G + V +D+T I
Sbjct: 49 ELPPPSLNVIMKD----EKILKSGIGIHED--------CNKLCSYLGVEEVNSIVDVTDI 96
Query: 145 YNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHC 204
+ HK L L T + + L +++C +W + L+ EQ YAA D++
Sbjct: 97 AKLMGHKDLKTSLQYLTSKYIHFHP----LKLDNKIRCGNWDAQTLSNEQILYAAHDSYY 152
Query: 205 LIEIFNIFQVK 215
E+F F K
Sbjct: 153 SRELFVYFYSK 163
>gi|195501501|ref|XP_002097822.1| GE26425 [Drosophila yakuba]
gi|194183923|gb|EDW97534.1| GE26425 [Drosophila yakuba]
Length = 900
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
SLA + K LD+ + K LQ +DW RPL ++ +YA D H LI ++ + Q+
Sbjct: 385 SLAYLLKHYLDLDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYERMTNDLLQQHAD 444
Query: 223 CSSISELDSSNLDLGLKGILEKPDIGNKTVRFKLCEALDIIRAT 266
+ + + D+ K KP IG ++ LD++R T
Sbjct: 445 PGLLGSVYQQSTDV-CKKRYNKPHIGPES-------HLDLVRKT 480
>gi|444728183|gb|ELW68647.1| Serine/threonine-protein kinase mTOR [Tupaia chinensis]
Length = 3780
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 3027 FIID--TLELRSDMYILNESFTDPAIVKVFHGADSDIEWLQKDFG--------------- 3069
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + +K+ Q +DW RPL EE +YA
Sbjct: 3070 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLADWRIRPLPEEMLSYAR 3127
Query: 200 IDAHCLIEIFNIFQVKVAQKGNS 222
D H L+ I++ ++++ ++G +
Sbjct: 3128 DDTHYLLYIYDKMRLELWERGGN 3150
>gi|383849711|ref|XP_003700481.1| PREDICTED: exosome component 10-like [Megachile rotundata]
Length = 1271
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 19/153 (12%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S +L+D ++ L S L E+F P ILK+ G D+
Sbjct: 306 STGDADYLID--TLSLRSELHELNEIFTKPTILKVF----------------HGADLDIQ 347
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
++ L + I N Q ++L SLA + K +I +K Q +DW RPL EE
Sbjct: 348 WLQRDLSLY-IVNMFDTHQAAKQLNLPYLSLAYLLKHYCNIDPNKHFQLADWRIRPLPEE 406
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
+ YA D H L+ I +I + + N +I
Sbjct: 407 LQKYAREDTHYLLYIKDILRNALIDAANGQINI 439
>gi|225630598|ref|YP_002727389.1| 3'-5' exonuclease [Wolbachia sp. wRi]
gi|225592579|gb|ACN95598.1| 3'-5' exonuclease [Wolbachia sp. wRi]
Length = 206
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ SL +C ELLD L+K+ Q SDW N LT++QK+YAA D L I
Sbjct: 113 DNHSLKELCLELLDTKLNKQQQSSDWGNENLTDKQKSYAASDVLYLHRI 161
>gi|440292006|gb|ELP85248.1| exosome complex exonuclease RRP6, putative [Entamoeba invadens IP1]
Length = 517
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 74 SNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFD 133
S S F++D+ I L LL E F +P I K+ D+++LS F
Sbjct: 230 STRSEDFVVDV--ITLRDSIHLLNEPFTNPKIEKVFHGCDFDMVWLSYNFG--------- 278
Query: 134 RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEE 193
+ N+ Q R L + SL + ++ + + K+ Q +DW RPLT+E
Sbjct: 279 --------LYVVNNFDSGQAARCLKLQHFSLKFLLEKYVGVEADKKYQLADWRIRPLTQE 330
Query: 194 QKNYAAIDAHCLIEIFNIFQVKVAQKGNSC---SSISELDSSNLDLGLKGILEKPDIGN 249
NYA D H L+ I ++ + N C + + E+ + + +L L+ L KP I N
Sbjct: 331 MINYARGDTHYLLYICDLMR-------NECLEQNVLYEVQAKSNELCLR--LFKPTIYN 380
>gi|348514838|ref|XP_003444947.1| PREDICTED: exosome component 10 [Oreochromis niloticus]
Length = 892
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 19/137 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSEMYILNEAFTDPSIVKVFHGADSDIEWLQRDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K + K Q +DW RPL +E YA
Sbjct: 381 --LYVVNLFDTHQASRALNLARHSLDHLLKHFCSVDSDKRYQLADWRVRPLPDEMVQYAR 438
Query: 200 IDAHCLIEIFNIFQVKV 216
D H L+ I++ +V++
Sbjct: 439 TDTHYLLYIYDCVRVQL 455
>gi|374619794|ref|ZP_09692328.1| ribonuclease D [gamma proteobacterium HIMB55]
gi|374303021|gb|EHQ57205.1| ribonuclease D [gamma proteobacterium HIMB55]
Length = 366
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 167 ICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSI 226
+ + + + +SKE SDW RPL+ +Q NYAA+D L I V+ A+K + I
Sbjct: 121 MVAQFVGVEISKEETTSDWLKRPLSAQQLNYAALDVTYLRSIGEKLHVQ-AEKACRLAWI 179
Query: 227 SELDSSNLDLGLKGILEKPDIGNK--TVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYL 284
E D++N G KG+ K K T L AL R + P +
Sbjct: 180 YE-DTANQKPGGKGVASKFKSAWKLSTGEQGLLSALIAWREDESHRLDRPRSWI------ 232
Query: 285 NTMPMDESLVKIVRKYGEKIL-LRECDKAPKT-SKKKGRKRSSVIVDSREKRLDDIGDWQ 342
+P D+ +V + R+ I L++ + P+ +K+G++ V+ +RE ++I W
Sbjct: 233 --LP-DKVMVALARRAPAHIAQLKQIEGLPEAIIRKRGQRLIEVLAGARETG-NEIVIWP 288
Query: 343 GP 344
P
Sbjct: 289 AP 290
>gi|182412681|ref|YP_001817747.1| 3'-5' exonuclease [Opitutus terrae PB90-1]
gi|177839895|gb|ACB74147.1| 3'-5' exonuclease [Opitutus terrae PB90-1]
Length = 391
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 79 VFLLD-LSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP 137
+FL+D L+ +P +W L E +++ G F L++ FC R P
Sbjct: 74 IFLVDVLAPLPFEGLWARLAE----KNLIMHGSDFDLRLLH---DFC---------RFRP 117
Query: 138 YLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNY 197
SI++ + QL + + LA++ ++ + LSKE Q ++WS RPLT++ +Y
Sbjct: 118 ----KSIFDTMLAAQL---INRPRIGLASLLEDHFGVKLSKESQKANWSKRPLTKKMLDY 170
Query: 198 AAIDAHCLIEIFNIFQVKVAQKGN 221
AA+D L + +I ++ + G
Sbjct: 171 AALDVFHLPALRDILTRELTKLGR 194
>gi|427707046|ref|YP_007049423.1| 3'-5' exonuclease [Nostoc sp. PCC 7107]
gi|427359551|gb|AFY42273.1| 3'-5' exonuclease [Nostoc sp. PCC 7107]
Length = 306
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 47 HQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDIL 106
+ S PR+SL+Q+ P ++ + VFLLD+ P + ++++ V+PDI
Sbjct: 32 YNSRNPRLSLIQVLDDP--------EDMSGDRVFLLDVLDQP-DLVANFIQQIMVNPDIE 82
Query: 107 KLGFKFKQDLIYLSSTFCSQ-GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLA 165
K+ D+ +L C + + PY + + N+ + K+LA
Sbjct: 83 KVFHHASYDVKFLGDKKARNITCTLEIAKKIPYY-LLPVPNY------------QLKTLA 129
Query: 166 NICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+ I K+ Q SDW RPLTEEQ +YA +D L ++
Sbjct: 130 TVLCNFHYID--KQAQTSDWGQRPLTEEQIDYAYLDCIYLAQV 170
>gi|386867240|ref|YP_006280234.1| ribonuclease D [Bifidobacterium animalis subsp. animalis ATCC
25527]
gi|385701323|gb|AFI63271.1| ribonuclease D [Bifidobacterium animalis subsp. animalis ATCC
25527]
Length = 433
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
LA + L I+L+KE +DWS RPL + +NYAA+D L ++ ++ ++G
Sbjct: 135 GLAYVTAHFLGITLAKEHSAADWSYRPLPRDWRNYAALDVELLSDLERAMTHELKRQGKW 194
Query: 223 CSSISELDSSNLDLGLK 239
+ E D + L GL+
Sbjct: 195 EWAQEEFDYA-LHEGLR 210
>gi|366995964|ref|XP_003677745.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
gi|342303615|emb|CCC71396.1| hypothetical protein NCAS_0H00860 [Naumovozyma castellii CBS 4309]
Length = 755
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
+L+D ++ L ++L +F +P I K+ D+I+L D+G L
Sbjct: 266 YLID--TLALREDLQILNNVFANPMITKVFHGAFMDIIWLQR-------DLG-------L 309
Query: 140 DITSIYNHLH-HKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
+ +++ H + +G LPK SLA + ++ SK+ Q +DW RPL++ YA
Sbjct: 310 YVVGLFDTFHASRAMG--LPKH--SLAYLLEKFAQFKTSKKYQLADWRIRPLSKAMHAYA 365
Query: 199 AIDAHCLIEIFN 210
D H L+ IF+
Sbjct: 366 RADTHFLLNIFD 377
>gi|282879856|ref|ZP_06288583.1| 3'-5' exonuclease [Prevotella timonensis CRIS 5C-B1]
gi|281306250|gb|EFA98283.1| 3'-5' exonuclease [Prevotella timonensis CRIS 5C-B1]
Length = 215
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 44/212 (20%)
Query: 10 KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQ-RSHQSNFPRVSLLQLACQPGPRFN 68
+I ++TS + E L + S++G+D E +P R QS +VSLLQ+A
Sbjct: 24 RIIVITSEKKAE--KAVDFLLKQSILGVDTETRPVFRKGQS--YKVSLLQVATH------ 73
Query: 69 PESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS--STFCSQ 126
+ +F L++ I PSI K L + + +G + DL+ L S F
Sbjct: 74 ------DTCFLFRLNILGIT-PSI----KRLLENTETKMIGLSWHDDLLALHKRSDF--- 119
Query: 127 GCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWS 186
+ ++D+ I L K L + K ANI ++ +SK + ++W+
Sbjct: 120 -------KKGNFIDLQDIVGDLGIKDLSLQ-----KLYANIFRQ----KISKRQRLTNWN 163
Query: 187 NRPLTEEQKNYAAIDAHCLIEIF-NIFQVKVA 217
N L+E+QK YAA DA I+++ I ++KV+
Sbjct: 164 NETLSEKQKQYAATDAWACIQLYEEIMRLKVS 195
>gi|229491276|ref|ZP_04385102.1| ribonuclease D [Rhodococcus erythropolis SK121]
gi|229321815|gb|EEN87610.1| ribonuclease D [Rhodococcus erythropolis SK121]
Length = 431
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ + +
Sbjct: 132 GRLAGFERVGLAAIVERTLRVELRKGHGAADWSTRPLPDAWLNYAALDVEVLLELRDAME 191
Query: 214 VKVAQKGN 221
++ +G
Sbjct: 192 AELESQGK 199
>gi|154508933|ref|ZP_02044575.1| hypothetical protein ACTODO_01449 [Actinomyces odontolyticus ATCC
17982]
gi|153798567|gb|EDN80987.1| putative ribonuclease D [Actinomyces odontolyticus ATCC 17982]
Length = 414
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + +++L + L K+ Q SDWS RPL +E YAA+D L E++ ++ +
Sbjct: 136 ERFGLAAVVEQVLGLGLVKDHQASDWSVRPLPKEWLRYAALDVELLTELYYRLSKRLDEM 195
Query: 220 G 220
G
Sbjct: 196 G 196
>gi|146101398|ref|XP_001469106.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134073475|emb|CAM72206.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 412
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 30/197 (15%)
Query: 14 VTSTESPEFTHLARALSQSSLVGLDAE--WKPQRSHQSNFPRVSLLQLACQPGPRFNPES 71
V STE E L +S + +D E P+ RVSL+Q P
Sbjct: 85 VISTEQ-ELKEAVGVLQRSRQIAIDVEAFCTPEAIKTPQLGRVSLVQTCSDVVP------ 137
Query: 72 DESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIG 131
VVFL D+ S+ +P + L+ +F I KL F ++D+ LS+ D+
Sbjct: 138 ------VVFLFDVLSLSVPVFMQALRPVFHDETIRKLFFDCRRDIEALSTQM-----DLT 186
Query: 132 FDRVEPYLDITSIYNHLHHK--QLGRK--LPKETKSLANICKELLDISLSKELQCSD--- 184
RV LD+ ++ L K + R+ + KS+A I ++ D ++ + D
Sbjct: 187 PKRV---LDLQLLFTALQWKLRSVNRRSGMTYVLKSVAGIHRQEGDSAVQTAMMVGDRPV 243
Query: 185 WSNRPLTEEQKNYAAID 201
W RPL E YAA D
Sbjct: 244 WDTRPLPEHFLEYAADD 260
>gi|108997029|ref|XP_001103741.1| PREDICTED: exosome component 10-like isoform 4 [Macaca mulatta]
gi|355557539|gb|EHH14319.1| hypothetical protein EGK_00224 [Macaca mulatta]
Length = 884
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|42520711|ref|NP_966626.1| 3'-5' exonuclease [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410451|gb|AAS14560.1| 3'-5' exonuclease [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 206
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDA 202
+ SL +C ELLD L+K+ Q SDW N LT++QK+YAA D
Sbjct: 113 DNHSLKELCLELLDTKLNKQQQSSDWGNENLTDKQKSYAASDV 155
>gi|255075175|ref|XP_002501262.1| predicted protein [Micromonas sp. RCC299]
gi|226516526|gb|ACO62520.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 152 QLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
Q R L +K LA + + K Q +DW RPL+EE +YA D H L+ +++
Sbjct: 139 QAARVLELPSKGLAYLLDHYCSVKADKRFQLADWRVRPLSEEMISYARGDTHHLLYVYDR 198
Query: 212 F--QVKVAQKGNSCSSISELDSSNLD 235
Q+ +G+ +L + LD
Sbjct: 199 LRQQLDAVGRGDGSKPFRDLIRTTLD 224
>gi|226185448|dbj|BAH33552.1| putative ribonuclease D [Rhodococcus erythropolis PR4]
Length = 429
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ + +
Sbjct: 130 GRLAGFERVGLAAIVERTLRVELRKGHGAADWSTRPLPDAWLNYAALDVEVLLELRDAME 189
Query: 214 VKVAQKGN 221
++ +G
Sbjct: 190 AELESQGK 197
>gi|27363618|ref|NP_759146.1| ribonuclease D [Vibrio vulnificus CMCP6]
gi|27359734|gb|AAO08673.1| ribonuclease D [Vibrio vulnificus CMCP6]
Length = 390
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A + ++ L++ L K +DW RPL+++Q YAA D H L+ ++ I KV + G
Sbjct: 134 STGFAALVEQYLNVELDKSESRTDWLARPLSDKQLEYAAADVHYLLPLYEILLEKVMEAG 193
Query: 221 --NSCSSISELDSS 232
+ SEL +S
Sbjct: 194 WWQAAQQESELQAS 207
>gi|268533174|ref|XP_002631715.1| Hypothetical protein CBG20916 [Caenorhabditis briggsae]
Length = 714
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
K L+ +C++ L L K QCS W RPL Q YAA+DA+C++ +++
Sbjct: 630 NKGLSYLCEKFLGKPLDKTEQCSVWDRRPLRNLQLRYAAMDAYCMLMLYD 679
>gi|395841111|ref|XP_003793392.1| PREDICTED: exosome component 10 [Otolemur garnettii]
Length = 881
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E F P I+K+ D+ +L D G
Sbjct: 333 FVID--TLELRSDLYILNESFTDPAIVKVFHGADSDIEWLQK-------DFGL------- 376
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 377 ---YVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQLADWRIRPLPEEMLSYAR 433
Query: 200 IDAHCLIEIFNIFQVKVAQKG 220
D H L+ I++ ++++ ++G
Sbjct: 434 DDTHYLLYIYDKMRLELWERG 454
>gi|380813854|gb|AFE78801.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419273|gb|AFH32850.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947748|gb|AFI37479.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 882
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|313234915|emb|CBY24860.1| unnamed protein product [Oikopleura dioica]
Length = 812
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 41/186 (22%)
Query: 30 SQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPL 89
S + VGLD EW + + +L+Q++ FL+ L + +
Sbjct: 98 SYCNYVGLDCEWVGKN-------KTALMQISVSTPAGIK----------CFLIRLCKVDI 140
Query: 90 PSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEP----YLDITSIY 145
+EL+ D++KLG D LS ++ F P + D+ I
Sbjct: 141 RICYELMA-FLRDEDVVKLGCGIDGDFKRLS--------EVDFVIFHPATISFFDLRQII 191
Query: 146 NHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNRPLTEEQKNYAAIDAH 203
+++ G LAN+ +++L L+K+ ++CS+W L+ EQK YAA DA
Sbjct: 192 PATNYQNGG---------LANLTRQILGRKLNKDYRVRCSNWEADTLSNEQKTYAADDAV 242
Query: 204 CLIEIF 209
C ++I
Sbjct: 243 CALQIL 248
>gi|195451328|ref|XP_002072866.1| GK13832 [Drosophila willistoni]
gi|194168951|gb|EDW83852.1| GK13832 [Drosophila willistoni]
Length = 913
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 126 QGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDW 185
G D+ + ++ L + I N + + L SLA + K +D+ + K LQ +DW
Sbjct: 362 HGADLDIEWLQRDLSLY-IVNMFDTHRAAKALNMARLSLAFLLKHYVDLDVDKSLQLADW 420
Query: 186 SNRPLTEEQKNYAAIDAHCLIEIF 209
RPL +E NYA D H LI ++
Sbjct: 421 RMRPLPQELINYARQDTHYLIYVY 444
>gi|453070952|ref|ZP_21974179.1| ribonuclease D [Rhodococcus qingshengii BKS 20-40]
gi|452760035|gb|EME18378.1| ribonuclease D [Rhodococcus qingshengii BKS 20-40]
Length = 429
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
GR E LA I + L + L K +DWS RPL + NYAA+D L+E+ + +
Sbjct: 130 GRLAGFERVGLAAIVERTLRVELRKGHGAADWSTRPLPDAWLNYAALDVEVLLELRDAME 189
Query: 214 VKVAQKGN 221
++ +G
Sbjct: 190 AELESQGK 197
>gi|333907899|ref|YP_004481485.1| ribonuclease D [Marinomonas posidonica IVIA-Po-181]
gi|333477905|gb|AEF54566.1| ribonuclease D [Marinomonas posidonica IVIA-Po-181]
Length = 380
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 20/119 (16%)
Query: 93 WELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ 152
W LK L V+ ++K+ CS+ D+ FDR+ + + + Q
Sbjct: 70 WAPLKALMVNTAVMKVFHA------------CSEDLDV-FDRL-----LGVLPTPFYDTQ 111
Query: 153 LGRKLPKETKSLANI--CKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
+G SL+ + E L I ++K+ SDW+ RPLT+ QK YAA+D L +++
Sbjct: 112 VGEAYVSAQWSLSYVKLIHEYLRIEVAKDETRSDWTQRPLTDAQKRYAALDVVYLAKVY 170
>gi|312114054|ref|YP_004011650.1| 3'-5' exonuclease [Rhodomicrobium vannielii ATCC 17100]
gi|311219183|gb|ADP70551.1| 3'-5' exonuclease [Rhodomicrobium vannielii ATCC 17100]
Length = 204
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E L ++C+ELL + LSK+ Q SDW LT EQ +YAA D L + +A++
Sbjct: 112 ERHGLKDLCRELLGVELSKQQQTSDWGQAKLTPEQLSYAASDVLHLHALKEKLDALLARE 171
Query: 220 GNS--CSSISELDSSNLDLGLKGILEKPDIGN 249
G + ++ +L LKG + D+ N
Sbjct: 172 GRTELAAACFGFLPYRAELDLKGWHDDADVFN 203
>gi|148978262|ref|ZP_01814780.1| ribonuclease D [Vibrionales bacterium SWAT-3]
gi|145962563|gb|EDK27840.1| ribonuclease D [Vibrionales bacterium SWAT-3]
Length = 372
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A + E + + L K +DW RPL+++Q +YAA D H L+ ++N KV + G
Sbjct: 115 STGFAALVSEFVGVDLDKSESRTDWLARPLSQKQLDYAAADVHYLMPMYNKLLEKVMEAG 174
Query: 221 -----------NSCSSISELDSSNLDLGLKGILE-KPD---IGNKTVRFKLCEALDIIRA 265
I +++ L +KG + KP I ++L EA+ A
Sbjct: 175 WWEAAQQESDLQVARRIRKVNPDTAYLDIKGAWQLKPQQLAILRPLATWRLKEAIKRDLA 234
Query: 266 TSYYSQCLPEGVVSRVSYLNTMPMDESLVKI--VRKYGEKI 304
++ + V+R + N M+E VR++G KI
Sbjct: 235 LNFIFKEQDLWAVARFAIKNPKRMEEEGFDFRSVRRHGAKI 275
>gi|269967938|ref|ZP_06181978.1| ribonuclease D [Vibrio alginolyticus 40B]
gi|269827461|gb|EEZ81755.1| ribonuclease D [Vibrio alginolyticus 40B]
Length = 388
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A++ +E L + L K +DW RPLT++Q +YAA D H L+ ++ KV Q G
Sbjct: 131 STGFASLVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEKLFDKVTQAG 190
>gi|320034794|gb|EFW16737.1| exosome complex exonuclease Rrp6 [Coccidioides posadasii str.
Silveira]
Length = 772
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P ILK+ D+I+L D+G L + +++ +H +
Sbjct: 291 QILNEVFADPRILKVLHGSSMDVIWLQR-------DLG-------LYLVGLFD-TYHASV 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
PK KSL + + +++ K+ Q +DW RPL +YA D H L+ I++ +
Sbjct: 336 ALNYPK--KSLKFLLDKFVNLEAEKQYQTADWRLRPLLPGMFDYARSDTHYLLYIYDNLR 393
Query: 214 VKVAQK 219
++ +K
Sbjct: 394 NELIEK 399
>gi|303310683|ref|XP_003065353.1| exosome component 3'-5' exonuclease [Coccidioides posadasii C735
delta SOWgp]
gi|240105015|gb|EER23208.1| 3'-5' exonuclease family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 766
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P ILK+ D+I+L D+G L + +++ +H +
Sbjct: 291 QILNEVFADPRILKVLHGSSMDVIWLQR-------DLG-------LYLVGLFD-TYHASV 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
PK KSL + + +++ K+ Q +DW RPL +YA D H L+ I++ +
Sbjct: 336 ALNYPK--KSLKFLLDKFVNLEAEKQYQTADWRLRPLLPGMFDYARSDTHYLLYIYDNLR 393
Query: 214 VKVAQK 219
++ +K
Sbjct: 394 NELIEK 399
>gi|389865548|ref|YP_006367789.1| 3'-5' exonuclease [Modestobacter marinus]
gi|388487752|emb|CCH89314.1| 3'-5' exonuclease [Modestobacter marinus]
Length = 435
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 163 SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
L + + LL +SL K +DWS RPL E+ YAA+D L+E+ + + ++G +
Sbjct: 163 GLGAVVESLLGLSLQKGHSAADWSTRPLPEDWLVYAALDVEVLVELRDALAAILDEQGKT 222
Query: 223 CSSISELDS 231
+ E ++
Sbjct: 223 EWARQEFEA 231
>gi|380813852|gb|AFE78800.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|383419271|gb|AFH32849.1| exosome component 10 isoform 1 [Macaca mulatta]
gi|384947746|gb|AFI37478.1| exosome component 10 isoform 1 [Macaca mulatta]
Length = 884
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 80 FLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYL 139
F++D ++ L S +L E P I+K+ D+ +L F
Sbjct: 338 FIID--TLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFG--------------- 380
Query: 140 DITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAA 199
+ N Q R L SL ++ K ++ +K+ Q +DW RPL EE +YA
Sbjct: 381 --LYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYAR 438
Query: 200 IDAHCLIEIFNIFQVKVAQKGN 221
D H L+ I++ ++++ ++GN
Sbjct: 439 DDTHYLLYIYDKMRLELWERGN 460
>gi|302803390|ref|XP_002983448.1| hypothetical protein SELMODRAFT_118353 [Selaginella moellendorffii]
gi|300148691|gb|EFJ15349.1| hypothetical protein SELMODRAFT_118353 [Selaginella moellendorffii]
Length = 200
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 33/190 (17%)
Query: 34 LVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDLSSIPLPSIW 93
++G D EWKP + R ++LQL +S+ VF + S IP P +
Sbjct: 42 VLGFDTEWKPSFERGAVPGRTAVLQLCL-----------DSSRCYVFHIFHSGIP-PQLQ 89
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
+LL+E I K G D+ L D G V +D++++ N ++L
Sbjct: 90 KLLEE----ETIWKAGIGISGDVSKLK-------LDYGVT-VTGSVDLSALAN----QKL 133
Query: 154 GRKLPKETKSLANICKELLDISLSK--ELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
R ++ SL+++ +EL + K +++C DW +PL+ Q +YAA DA + ++ +
Sbjct: 134 KRS---QSWSLSSLAEELTCKVIDKPTDIRCGDWELQPLSPAQLSYAATDAFASLHLYQV 190
Query: 212 FQVKVAQKGN 221
+ Q N
Sbjct: 191 RNEALLQNRN 200
>gi|321452322|gb|EFX63735.1| hypothetical protein DAPPUDRAFT_118908 [Daphnia pulex]
Length = 341
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 11 IHLVTSTES-PEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNP 69
IH + S E EF + +S+S++VG+D EW P + ++LQ+A
Sbjct: 143 IHWICSWEGVHEFLGI---VSKSTVVGVDIEWPPF----GTLAKATVLQIATHDK----- 190
Query: 70 ESDESNASVVFLLDLSSI------PLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTF 123
+FLLD+ S+ + + +L+ +LF + ILKLG+ K+DL LS +
Sbjct: 191 ---------IFLLDIFSLREDKSCSVINSQQLIGDLFGNRHILKLGYGLKEDLHVLSRSL 241
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHK----------QLGRKLPKET-KSLANICKELL 172
G D+ + ++DI ++++++ K G +ET K L+ + K LL
Sbjct: 242 PGIG-DVS-KSIVNWIDIKNLWSNIETKYPSFLPPAVLNDGDTCSQETHKGLSGLVKLLL 299
Query: 173 DISLSKELQCSDWSNRPLTEEQKNYAA-----IDAHCLIEIF 209
+ L K+ Q SDW RPL Q YA ++ H + F
Sbjct: 300 GLPLDKKEQFSDWQKRPLRTSQFIYAGKLSYDLNMHSYTQYF 341
>gi|262394860|ref|YP_003286714.1| ribonuclease D [Vibrio sp. Ex25]
gi|262338454|gb|ACY52249.1| ribonuclease D [Vibrio sp. Ex25]
Length = 388
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A++ +E L + L K +DW RPLT++Q +YAA D H L+ ++ KV Q G
Sbjct: 131 STGFASLVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEKLLDKVTQAG 190
>gi|119195137|ref|XP_001248172.1| exosome component 3'-5' exonuclease [Coccidioides immitis RS]
gi|392862584|gb|EAS36760.2| exosome complex exonuclease Rrp6 [Coccidioides immitis RS]
Length = 766
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++L E+F P ILK+ D+I+L D+G L + +++ +H +
Sbjct: 291 QILNEVFADPRILKVLHGSSMDVIWLQR-------DLG-------LYLVGLFD-TYHASV 335
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
PK KSL + + +++ K+ Q +DW RPL +YA D H L+ I++ +
Sbjct: 336 ALNYPK--KSLKFLLDKFVNLEAEKQYQTADWRLRPLLPGMFDYARSDTHYLLYIYDNLR 393
Query: 214 VKVAQK 219
++ +K
Sbjct: 394 NELIEK 399
>gi|336117961|ref|YP_004572729.1| ribonuclease D [Microlunatus phosphovorus NM-1]
gi|334685741|dbj|BAK35326.1| putative ribonuclease D [Microlunatus phosphovorus NM-1]
Length = 413
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 147 HLHHKQLGRKLPKETK-SLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
HL +L +L + +L + ELL + L KE +DWS RPL E YAA+D L
Sbjct: 123 HLFDTELAARLLNYPRVALGTMLTELLGVRLLKEHSAADWSTRPLPAEWLTYAALDVELL 182
Query: 206 IEIFNIFQVKVAQKGN 221
+E+ + ++ G
Sbjct: 183 VELRDRLADQLVAAGK 198
>gi|164655640|ref|XP_001728949.1| hypothetical protein MGL_3943 [Malassezia globosa CBS 7966]
gi|159102837|gb|EDP41735.1| hypothetical protein MGL_3943 [Malassezia globosa CBS 7966]
Length = 849
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
ELL F PD + + D+++L D+G L +T++++ Q
Sbjct: 313 ELLNTAFTHPDKVLVLHGADHDILWLQR-------DLG-------LYVTNLFDTF---QA 355
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + + K Q +DW RPL E YA D H L+ +++ +
Sbjct: 356 ARALQFGALSLAFLLLRYTNFEADKRFQTADWRIRPLPREMLFYARSDTHALLYVYDCLR 415
Query: 214 VKVAQKGNSCSSISELDSS 232
++ Q+G + D S
Sbjct: 416 NELLQRGGPLAVKEVFDRS 434
>gi|345564419|gb|EGX47382.1| hypothetical protein AOL_s00083g475 [Arthrobotrys oligospora ATCC
24927]
Length = 806
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 17/130 (13%)
Query: 94 ELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL 153
E+L E+F +P I+K+ D+I+L + FD +
Sbjct: 290 EVLNEVFANPGIVKVFHGAFMDIIWLQRDLNIYVVGL-FDTYDA---------------- 332
Query: 154 GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ 213
R L SLA + K+ ++ K Q +DW RP+ +E +YA D H L+ I++ +
Sbjct: 333 ARSLGFTGHSLAFLLKKYINFDADKSYQLADWRVRPIPQEMLDYARSDTHFLLFIYDNMR 392
Query: 214 VKVAQKGNSC 223
++ K N+
Sbjct: 393 NELIGKSNAA 402
>gi|416856557|ref|ZP_11912131.1| ribonuclease D [Pseudomonas aeruginosa 138244]
gi|420140701|ref|ZP_14648441.1| ribonuclease D [Pseudomonas aeruginosa CIG1]
gi|421161990|ref|ZP_15620882.1| ribonuclease D [Pseudomonas aeruginosa ATCC 25324]
gi|424940506|ref|ZP_18356269.1| ribonuclease D [Pseudomonas aeruginosa NCMG1179]
gi|451988440|ref|ZP_21936569.1| Ribonuclease D [Pseudomonas aeruginosa 18A]
gi|334841819|gb|EGM20440.1| ribonuclease D [Pseudomonas aeruginosa 138244]
gi|346056952|dbj|GAA16835.1| ribonuclease D [Pseudomonas aeruginosa NCMG1179]
gi|403246543|gb|EJY60259.1| ribonuclease D [Pseudomonas aeruginosa CIG1]
gi|404537329|gb|EKA46933.1| ribonuclease D [Pseudomonas aeruginosa ATCC 25324]
gi|451753938|emb|CCQ89092.1| Ribonuclease D [Pseudomonas aeruginosa 18A]
Length = 374
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
CS+ ++ F R+ L + L LG + + + KE+LDI L K+ S
Sbjct: 85 CSEDLEV-FLRLTGSLPVPLFDTQLAAAYLGMA---HSMGYSKLVKEVLDIDLPKDETRS 140
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
DW RPLTE Q YAA D L +++ +++++ +
Sbjct: 141 DWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKRA 179
>gi|91228923|ref|ZP_01262822.1| ribonuclease D, partial [Vibrio alginolyticus 12G01]
gi|91187531|gb|EAS73864.1| ribonuclease D [Vibrio alginolyticus 12G01]
Length = 277
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A++ +E L + L K +DW RPLT++Q +YAA D H L+ ++ KV Q G
Sbjct: 128 STGFASLVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEKLFDKVTQAG 187
>gi|451975380|ref|ZP_21926571.1| ribonuclease D [Vibrio alginolyticus E0666]
gi|451930692|gb|EMD78395.1| ribonuclease D [Vibrio alginolyticus E0666]
Length = 388
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 161 TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKG 220
+ A++ +E L + L K +DW RPLT++Q +YAA D H L+ ++ KV Q G
Sbjct: 131 STGFASLVEEYLGVELDKSESRTDWMARPLTQKQLDYAAADVHYLLPLYEKLFDKVTQAG 190
>gi|293192610|ref|ZP_06609564.1| putative ribonuclease D [Actinomyces odontolyticus F0309]
gi|292820117|gb|EFF79114.1| putative ribonuclease D [Actinomyces odontolyticus F0309]
Length = 414
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 160 ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQK 219
E LA + +++L + L K+ Q SDWS RPL +E YAA+D L E++ ++ +
Sbjct: 136 ERFGLAAVVEQVLGLGLVKDHQASDWSVRPLPKEWLRYAALDVELLTELYYRLSKRLDEM 195
Query: 220 G 220
G
Sbjct: 196 G 196
>gi|407008616|gb|EKE23949.1| hypothetical protein ACD_6C00282G0005 [uncultured bacterium]
Length = 380
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 21 EFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVF 80
+ TH+ + + Q+S+ GLD E+ + +P++ + Q+ + V+
Sbjct: 10 DLTHVLKLMDQNSVYGLDTEFIKV---DTLWPKLGVFQINVD--------------NKVY 52
Query: 81 LLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLD 140
LLD +++ L E L ++F + +Q++ + CS+ D+ + Y
Sbjct: 53 LLDGTTLDLT---EFLNKIFNA----------QQNIFHA----CSEDIDL----IYHYTQ 91
Query: 141 ITSIYNHLHHKQLGRKLPKE--TKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYA 198
S+ N + Q+G S N K++L++ + K+ SDW RPL+ EQ YA
Sbjct: 92 KKSLSN-VFDTQVGMSFLGHGLQVSYQNALKQMLEVDIEKDQTRSDWLARPLSSEQLLYA 150
Query: 199 AIDAHCLIEI 208
A D H L+++
Sbjct: 151 ANDVHYLVQL 160
>gi|293334443|ref|NP_001170525.1| uncharacterized protein LOC100384536 [Zea mays]
gi|238005848|gb|ACR33959.1| unknown [Zea mays]
gi|414864884|tpg|DAA43441.1| TPA: hypothetical protein ZEAMMB73_373944 [Zea mays]
Length = 666
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 17/124 (13%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGR 155
L+E F P K+ +D+++L F C++ FD Q R
Sbjct: 216 LQEPFKDPTKRKVMHGADRDIMWLQRDFHIYVCNL-FDT----------------GQASR 258
Query: 156 KLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVK 215
L E SL ++ ++ KE Q +DW +RPL +E YA D H L+ I+++ + +
Sbjct: 259 VLQMERNSLEHLLLHFCGVTAKKEYQNADWRSRPLPDEMIKYAREDTHYLLYIYDLMRQR 318
Query: 216 VAQK 219
+ ++
Sbjct: 319 LQRE 322
>gi|254510165|ref|ZP_05122232.1| 3'-5' exonuclease [Rhodobacteraceae bacterium KLH11]
gi|221533876|gb|EEE36864.1| 3'-5' exonuclease [Rhodobacteraceae bacterium KLH11]
Length = 204
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFNPESDESNASVVFLLDL 84
L L +V +D E H+ R+ ++Q++ G + ++ AS
Sbjct: 10 LPDGLDMGPIVAIDCETMGLNPHRD---RLCVIQMSGGDGDCHIVQVEKGQASA------ 60
Query: 85 SSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSI 144
P++ +L++ P+ILKL F F + FD Y ++
Sbjct: 61 -----PNLCAMLED----PNILKL-FHFGR-----------------FDIAAMYHAFGAL 93
Query: 145 YNHLHHKQLGRKLPK---ETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAID 201
++ ++ +L + + L N+C+ELL + +SK+ Q SDW LT+ Q +YAA D
Sbjct: 94 AAPVYCTKIASRLVRTYTDRHGLKNLCQELLGVDISKQQQMSDWGAETLTDAQLDYAASD 153
Query: 202 AHCLIEIFNIFQVKVAQKGNS 222
L + ++A++G +
Sbjct: 154 VLYLHRLREALDGRLAREGRT 174
>gi|453382611|dbj|GAC82906.1| ribonuclease D [Gordonia paraffinivorans NBRC 108238]
Length = 429
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 147 HLHHKQL-GRKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCL 205
L+ +L GR L +LA + + L + L K +DWS RPL ++ NYAA+D L
Sbjct: 121 ELYDTELAGRLLGLSKVNLAAMVAQFLGLGLVKGHGAADWSRRPLPDDWLNYAALDVEVL 180
Query: 206 IEIFNIFQVKVAQKG 220
+E+ + + + G
Sbjct: 181 VELRDAMDAALVEAG 195
>gi|15596491|ref|NP_249985.1| ribonuclease D [Pseudomonas aeruginosa PAO1]
gi|9947230|gb|AAG04683.1|AE004559_2 ribonuclease D [Pseudomonas aeruginosa PAO1]
Length = 374
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
CS+ ++ F R+ L + L LG + + + KE+LDI L K+ S
Sbjct: 85 CSEDLEV-FLRLTGSLPVPLFDTQLAAAYLGMA---HSMGYSKLVKEVLDIDLPKDETRS 140
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
DW RPLTE Q YAA D L +++ +++++ +
Sbjct: 141 DWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEEKRA 179
>gi|418583147|ref|ZP_13147217.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P1]
gi|375047367|gb|EHS39913.1| ribonuclease D [Pseudomonas aeruginosa MPAO1/P1]
Length = 376
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
CS+ ++ F R+ L + L LG + + + KE+LDI L K+ S
Sbjct: 87 CSEDLEV-FLRLTGSLPVPLFDTQLAAAYLGMA---HSMGYSKLVKEVLDIDLPKDETRS 142
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
DW RPLTE Q YAA D L +++ +++++ +
Sbjct: 143 DWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEEKRA 181
>gi|342179232|sp|A6V8R6.2|RND_PSEA7 RecName: Full=Ribonuclease D; Short=RNase D
Length = 376
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 124 CSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCS 183
CS+ ++ F R+ L + L LG + + + KE+LDI L K+ S
Sbjct: 87 CSEDLEV-FLRLTGSLPVPLFDTQLAAAYLGMA---HSMGYSKLVKEVLDIDLPKDETRS 142
Query: 184 DWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNS 222
DW RPLTE Q YAA D L +++ +++++ +
Sbjct: 143 DWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKRA 181
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,273,762,801
Number of Sequences: 23463169
Number of extensions: 263151292
Number of successful extensions: 552366
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 815
Number of HSP's that attempted gapping in prelim test: 549453
Number of HSP's gapped (non-prelim): 2953
length of query: 393
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 249
effective length of database: 8,980,499,031
effective search space: 2236144258719
effective search space used: 2236144258719
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)