Query 016211
Match_columns 393
No_of_seqs 207 out of 2026
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 09:46:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016211.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016211hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 1.9E-29 6.4E-34 240.2 33.4 301 64-388 112-421 (425)
2 3i6d_A Protoporphyrinogen oxid 100.0 1.5E-28 5.2E-33 236.9 16.3 361 2-388 65-462 (470)
3 3nks_A Protoporphyrinogen oxid 100.0 2.3E-28 8E-33 236.1 16.7 287 93-388 141-468 (477)
4 3lov_A Protoporphyrinogen oxid 100.0 1.7E-28 5.9E-33 236.9 15.5 361 2-388 60-459 (475)
5 3nrn_A Uncharacterized protein 100.0 7.4E-26 2.5E-30 215.0 31.2 333 7-388 61-401 (421)
6 2ivd_A PPO, PPOX, protoporphyr 100.0 1.9E-27 6.6E-32 229.7 19.8 353 2-388 70-467 (478)
7 1sez_A Protoporphyrinogen oxid 99.9 3.7E-27 1.3E-31 229.2 14.8 360 2-388 67-487 (504)
8 1s3e_A Amine oxidase [flavin-c 99.9 5.4E-26 1.8E-30 221.7 21.0 283 92-388 142-448 (520)
9 2yg5_A Putrescine oxidase; oxi 99.9 1E-25 3.6E-30 216.1 16.1 279 92-388 142-445 (453)
10 2vvm_A Monoamine oxidase N; FA 99.9 4.7E-24 1.6E-28 206.8 18.1 279 91-388 181-479 (495)
11 4dsg_A UDP-galactopyranose mut 99.9 1.7E-23 5.9E-28 201.5 12.8 352 2-388 65-449 (484)
12 4gde_A UDP-galactopyranose mut 99.9 5.3E-23 1.8E-27 200.3 14.9 351 2-387 66-472 (513)
13 4dgk_A Phytoene dehydrogenase; 99.9 5.1E-22 1.8E-26 192.8 20.6 280 96-388 164-485 (501)
14 1b37_A Protein (polyamine oxid 99.8 5.7E-21 2E-25 183.9 10.9 284 93-388 135-452 (472)
15 3qj4_A Renalase; FAD/NAD(P)-bi 99.8 5.7E-20 1.9E-24 169.5 16.8 221 154-388 105-336 (342)
16 3k7m_X 6-hydroxy-L-nicotine ox 99.8 1.3E-17 4.4E-22 158.7 20.6 266 91-388 137-420 (431)
17 2iid_A L-amino-acid oxidase; f 99.8 8.6E-18 2.9E-22 162.9 15.2 277 91-388 178-478 (498)
18 2jae_A L-amino acid oxidase; o 99.7 2.2E-18 7.5E-23 166.7 10.2 224 151-388 229-479 (489)
19 3p1w_A Rabgdi protein; GDI RAB 99.7 8.4E-17 2.9E-21 152.3 17.0 204 2-219 93-313 (475)
20 2z3y_A Lysine-specific histone 99.7 3.5E-17 1.2E-21 163.3 13.8 216 153-388 393-652 (662)
21 2xag_A Lysine-specific histone 99.7 6.3E-17 2.1E-21 163.8 14.7 216 153-388 564-823 (852)
22 2b9w_A Putative aminooxidase; 99.7 6.3E-17 2.1E-21 153.6 13.5 270 93-388 140-420 (424)
23 4gut_A Lysine-specific histone 99.7 8.9E-17 3E-21 161.6 8.7 221 152-388 525-771 (776)
24 1rsg_A FMS1 protein; FAD bindi 99.7 4.2E-16 1.4E-20 151.6 11.7 151 93-260 136-307 (516)
25 1vg0_A RAB proteins geranylger 99.6 2.3E-14 7.8E-19 139.6 16.8 222 7-259 235-461 (650)
26 1yvv_A Amine oxidase, flavin-c 99.5 4.3E-13 1.5E-17 122.9 15.7 209 157-388 106-321 (336)
27 1d5t_A Guanine nucleotide diss 99.5 1.1E-12 3.7E-17 124.5 17.1 199 7-220 85-290 (433)
28 3ayj_A Pro-enzyme of L-phenyla 99.5 2.7E-14 9.1E-19 140.9 5.5 285 91-387 279-672 (721)
29 2bcg_G Secretory pathway GDP d 99.4 3.8E-12 1.3E-16 121.5 16.7 196 7-219 93-299 (453)
30 3hdq_A UDP-galactopyranose mut 99.2 2.3E-11 7.8E-16 113.0 6.2 201 2-259 85-289 (397)
31 1i8t_A UDP-galactopyranose mut 99.1 3.5E-12 1.2E-16 118.2 -1.3 200 2-258 56-260 (367)
32 1v0j_A UDP-galactopyranose mut 99.1 5.3E-12 1.8E-16 118.4 -0.8 204 2-258 65-274 (399)
33 2bi7_A UDP-galactopyranose mut 99.1 2.4E-11 8.2E-16 113.2 1.2 197 2-255 60-260 (384)
34 2e1m_C L-glutamate oxidase; L- 98.2 9.6E-08 3.3E-12 78.6 -1.0 84 303-388 48-146 (181)
35 1ryi_A Glycine oxidase; flavop 97.7 0.00081 2.8E-08 62.0 14.3 54 164-220 166-219 (382)
36 2e1m_A L-glutamate oxidase; L- 97.6 0.00015 5.2E-09 66.6 8.3 114 91-218 257-371 (376)
37 2gag_B Heterotetrameric sarcos 97.5 0.0036 1.2E-07 58.0 17.0 55 164-220 176-230 (405)
38 2e1m_B L-glutamate oxidase; L- 97.4 0.00015 5.1E-09 55.4 4.3 113 205-336 4-118 (130)
39 3dme_A Conserved exported prot 97.3 0.0028 9.7E-08 57.8 13.4 60 164-226 152-214 (369)
40 3dje_A Fructosyl amine: oxygen 97.2 0.00085 2.9E-08 63.2 8.6 55 164-220 163-221 (438)
41 3da1_A Glycerol-3-phosphate de 97.2 0.011 3.8E-07 57.5 16.0 56 163-220 171-232 (561)
42 3nyc_A D-arginine dehydrogenas 96.9 0.0017 5.7E-08 59.7 7.6 55 163-220 155-209 (381)
43 1y56_B Sarcosine oxidase; dehy 96.8 0.0033 1.1E-07 57.8 8.8 56 163-220 150-205 (382)
44 2i0z_A NAD(FAD)-utilizing dehy 96.7 0.0064 2.2E-07 57.4 9.5 65 154-220 126-191 (447)
45 3nlc_A Uncharacterized protein 96.6 0.0047 1.6E-07 59.6 7.9 56 164-221 222-278 (549)
46 3axb_A Putative oxidoreductase 96.5 0.0052 1.8E-07 57.9 7.9 62 163-227 182-260 (448)
47 3fg2_P Putative rubredoxin red 96.5 0.0068 2.3E-07 56.4 8.3 57 162-220 184-241 (404)
48 3lxd_A FAD-dependent pyridine 96.5 0.0068 2.3E-07 56.5 8.1 57 162-220 194-251 (415)
49 1pj5_A N,N-dimethylglycine oxi 96.4 0.0084 2.9E-07 61.3 8.7 56 163-220 152-207 (830)
50 2oln_A NIKD protein; flavoprot 96.3 0.0078 2.7E-07 55.7 7.5 54 164-220 155-208 (397)
51 3v76_A Flavoprotein; structura 96.3 0.014 4.7E-07 54.5 8.9 63 154-220 125-187 (417)
52 2uzz_A N-methyl-L-tryptophan o 96.3 0.0085 2.9E-07 54.8 7.4 54 164-220 151-204 (372)
53 2gf3_A MSOX, monomeric sarcosi 96.2 0.011 3.6E-07 54.5 7.8 60 164-227 152-211 (389)
54 4at0_A 3-ketosteroid-delta4-5a 96.2 0.012 4.2E-07 56.4 8.4 56 164-220 204-264 (510)
55 3ps9_A TRNA 5-methylaminomethy 96.1 0.0095 3.2E-07 59.4 7.5 54 164-220 419-473 (676)
56 1y0p_A Fumarate reductase flav 96.0 0.018 6.3E-07 56.1 8.7 58 162-220 255-317 (571)
57 2cdu_A NADPH oxidase; flavoenz 96.0 0.013 4.5E-07 55.3 7.4 57 162-220 191-247 (452)
58 3pvc_A TRNA 5-methylaminomethy 95.9 0.011 3.9E-07 59.0 7.0 54 164-220 414-469 (689)
59 2rgh_A Alpha-glycerophosphate 95.9 0.018 6E-07 56.2 7.9 56 163-220 189-250 (571)
60 1qo8_A Flavocytochrome C3 fuma 95.8 0.021 7.2E-07 55.6 7.9 57 163-220 251-312 (566)
61 1d4d_A Flavocytochrome C fumar 95.7 0.026 8.9E-07 55.0 8.4 58 162-220 255-317 (572)
62 3cgv_A Geranylgeranyl reductas 95.7 0.018 6.1E-07 53.1 7.0 60 164-225 104-168 (397)
63 3iwa_A FAD-dependent pyridine 95.6 0.037 1.3E-06 52.4 8.8 57 161-220 201-258 (472)
64 2gqf_A Hypothetical protein HI 95.5 0.03 1E-06 51.9 7.6 63 154-220 102-168 (401)
65 2cul_A Glucose-inhibited divis 95.4 0.03 1E-06 47.5 6.9 53 164-219 70-124 (232)
66 3atr_A Conserved archaeal prot 95.4 0.043 1.5E-06 51.7 8.6 55 164-220 102-162 (453)
67 1q1r_A Putidaredoxin reductase 95.4 0.037 1.3E-06 51.8 7.9 54 164-219 193-249 (431)
68 3oc4_A Oxidoreductase, pyridin 95.4 0.028 9.5E-07 53.0 7.1 56 161-219 188-243 (452)
69 3c4n_A Uncharacterized protein 95.1 0.016 5.4E-07 53.8 4.5 54 164-220 174-236 (405)
70 2qcu_A Aerobic glycerol-3-phos 95.1 0.049 1.7E-06 52.1 7.8 55 163-220 150-210 (501)
71 2gmh_A Electron transfer flavo 95.1 0.055 1.9E-06 52.8 8.3 56 164-220 146-217 (584)
72 3ef6_A Toluene 1,2-dioxygenase 95.1 0.036 1.2E-06 51.5 6.7 54 164-220 187-241 (410)
73 2ywl_A Thioredoxin reductase r 95.0 0.044 1.5E-06 44.3 6.3 53 164-220 58-110 (180)
74 1mo9_A ORF3; nucleotide bindin 95.0 0.057 2E-06 51.9 7.9 56 163-219 256-315 (523)
75 3o0h_A Glutathione reductase; 94.9 0.048 1.6E-06 51.9 7.2 54 163-219 233-287 (484)
76 1trb_A Thioredoxin reductase; 94.9 0.073 2.5E-06 47.3 8.1 54 164-219 186-246 (320)
77 1xdi_A RV3303C-LPDA; reductase 94.9 0.05 1.7E-06 52.0 7.4 57 161-220 222-279 (499)
78 2v3a_A Rubredoxin reductase; a 94.8 0.056 1.9E-06 49.7 7.2 55 163-220 188-243 (384)
79 3e1t_A Halogenase; flavoprotei 94.8 0.069 2.3E-06 51.2 8.0 55 164-220 113-172 (512)
80 1n4w_A CHOD, cholesterol oxida 94.8 0.057 1.9E-06 51.7 7.4 60 166-225 225-293 (504)
81 2e4g_A Tryptophan halogenase; 94.8 0.067 2.3E-06 51.8 8.0 55 164-220 196-252 (550)
82 2wpf_A Trypanothione reductase 94.7 0.059 2E-06 51.5 7.3 55 163-219 236-291 (495)
83 3nix_A Flavoprotein/dehydrogen 94.7 0.07 2.4E-06 49.5 7.5 62 164-226 108-173 (421)
84 1zk7_A HGII, reductase, mercur 94.7 0.083 2.8E-06 50.0 8.1 55 163-220 217-271 (467)
85 1fec_A Trypanothione reductase 94.6 0.059 2E-06 51.4 7.0 56 163-220 232-288 (490)
86 2weu_A Tryptophan 5-halogenase 94.6 0.084 2.9E-06 50.5 8.1 55 164-220 175-230 (511)
87 2x3n_A Probable FAD-dependent 94.6 0.049 1.7E-06 50.3 6.2 61 164-226 109-173 (399)
88 2hqm_A GR, grase, glutathione 94.6 0.076 2.6E-06 50.4 7.6 57 162-219 226-284 (479)
89 2wdq_A Succinate dehydrogenase 94.5 0.075 2.6E-06 51.9 7.6 57 163-220 144-206 (588)
90 2bs2_A Quinol-fumarate reducta 94.5 0.094 3.2E-06 51.9 8.2 56 163-220 159-220 (660)
91 1m6i_A Programmed cell death p 94.5 0.074 2.5E-06 50.7 7.3 53 164-219 228-281 (493)
92 2bc0_A NADH oxidase; flavoprot 94.4 0.061 2.1E-06 51.3 6.6 55 162-219 236-290 (490)
93 2h88_A Succinate dehydrogenase 94.4 0.074 2.5E-06 52.2 7.2 56 163-220 156-217 (621)
94 1rp0_A ARA6, thiazole biosynth 94.4 0.099 3.4E-06 45.8 7.4 53 164-218 121-189 (284)
95 4dna_A Probable glutathione re 94.3 0.076 2.6E-06 50.2 7.1 56 162-220 211-268 (463)
96 2yqu_A 2-oxoglutarate dehydrog 94.2 0.093 3.2E-06 49.4 7.4 55 163-220 209-264 (455)
97 1ges_A Glutathione reductase; 94.2 0.093 3.2E-06 49.4 7.2 56 162-219 208-264 (450)
98 3cgb_A Pyridine nucleotide-dis 94.1 0.14 4.9E-06 48.5 8.4 56 162-220 227-282 (480)
99 4a9w_A Monooxygenase; baeyer-v 94.0 0.1 3.5E-06 47.0 7.0 55 164-220 78-132 (357)
100 1coy_A Cholesterol oxidase; ox 94.0 0.11 3.8E-06 49.7 7.5 60 166-225 230-298 (507)
101 2zxi_A TRNA uridine 5-carboxym 93.9 0.11 3.7E-06 50.7 7.2 54 164-220 125-180 (637)
102 3ces_A MNMG, tRNA uridine 5-ca 93.6 0.12 4E-06 50.7 6.9 54 164-220 126-181 (651)
103 2aqj_A Tryptophan halogenase, 93.6 0.16 5.4E-06 49.0 7.8 55 164-220 167-222 (538)
104 3itj_A Thioredoxin reductase 1 93.6 0.13 4.6E-06 45.8 6.9 52 166-219 212-270 (338)
105 1nhp_A NADH peroxidase; oxidor 93.6 0.11 3.7E-06 48.8 6.4 56 162-220 191-246 (447)
106 1onf_A GR, grase, glutathione 93.4 0.17 5.8E-06 48.3 7.6 57 162-220 217-275 (500)
107 1kf6_A Fumarate reductase flav 93.3 0.16 5.3E-06 49.8 7.3 56 163-220 135-197 (602)
108 3lad_A Dihydrolipoamide dehydr 93.3 0.2 6.9E-06 47.4 7.9 55 162-219 221-279 (476)
109 2r9z_A Glutathione amide reduc 93.3 0.19 6.4E-06 47.5 7.6 55 162-219 207-263 (463)
110 3cty_A Thioredoxin reductase; 93.2 0.2 6.8E-06 44.4 7.4 52 166-219 194-251 (319)
111 3ab1_A Ferredoxin--NADP reduct 93.2 0.17 5.7E-06 45.9 7.0 54 164-219 204-262 (360)
112 3i3l_A Alkylhalidase CMLS; fla 93.2 0.18 6.1E-06 49.2 7.4 55 164-220 130-188 (591)
113 3ihg_A RDME; flavoenzyme, anth 93.1 0.2 6.9E-06 48.2 7.7 61 164-225 122-189 (535)
114 3ntd_A FAD-dependent pyridine 93.1 0.18 6.2E-06 48.8 7.5 55 164-219 194-266 (565)
115 2pyx_A Tryptophan halogenase; 93.0 0.25 8.5E-06 47.5 8.1 55 164-220 177-233 (526)
116 2eq6_A Pyruvate dehydrogenase 93.0 0.27 9.2E-06 46.4 8.2 55 162-219 210-270 (464)
117 2e5v_A L-aspartate oxidase; ar 92.9 0.18 6.2E-06 47.7 6.9 55 163-220 120-176 (472)
118 3d1c_A Flavin-containing putat 92.9 0.18 6.3E-06 45.6 6.7 54 164-220 90-143 (369)
119 3alj_A 2-methyl-3-hydroxypyrid 92.9 0.22 7.5E-06 45.5 7.2 57 164-226 109-167 (379)
120 2gqw_A Ferredoxin reductase; f 92.8 0.23 7.8E-06 46.0 7.3 51 162-219 187-238 (408)
121 2qae_A Lipoamide, dihydrolipoy 92.8 0.29 9.8E-06 46.2 8.1 55 162-219 215-275 (468)
122 1k0i_A P-hydroxybenzoate hydro 92.7 0.3 1E-05 44.8 8.0 60 164-225 105-169 (394)
123 3kkj_A Amine oxidase, flavin-c 92.5 0.063 2.2E-06 46.1 2.9 76 308-388 243-321 (336)
124 2a8x_A Dihydrolipoyl dehydroge 92.5 0.34 1.2E-05 45.6 8.2 55 162-219 212-270 (464)
125 3ics_A Coenzyme A-disulfide re 92.3 0.23 7.9E-06 48.4 6.9 53 162-219 228-281 (588)
126 1chu_A Protein (L-aspartate ox 92.3 0.16 5.5E-06 49.0 5.7 56 164-220 140-208 (540)
127 3r9u_A Thioredoxin reductase; 92.2 0.26 9E-06 43.3 6.7 48 170-219 191-243 (315)
128 1ojt_A Surface protein; redox- 92.2 0.21 7.1E-06 47.4 6.3 56 162-220 226-286 (482)
129 2qa2_A CABE, polyketide oxygen 92.1 0.36 1.2E-05 46.0 7.9 60 164-226 109-173 (499)
130 1zmd_A Dihydrolipoyl dehydroge 92.1 0.33 1.1E-05 45.8 7.6 57 161-219 219-281 (474)
131 1ebd_A E3BD, dihydrolipoamide 92.0 0.32 1.1E-05 45.7 7.4 56 162-220 211-270 (455)
132 3dgh_A TRXR-1, thioredoxin red 91.9 0.31 1E-05 46.2 7.1 56 162-219 227-288 (483)
133 2qa1_A PGAE, polyketide oxygen 91.9 0.38 1.3E-05 45.9 7.7 60 164-226 108-172 (500)
134 3urh_A Dihydrolipoyl dehydroge 91.9 0.42 1.4E-05 45.4 8.0 55 162-219 239-299 (491)
135 2bry_A NEDD9 interacting prote 91.8 0.15 5.2E-06 48.6 4.9 58 164-221 168-231 (497)
136 1v59_A Dihydrolipoamide dehydr 91.7 0.38 1.3E-05 45.4 7.5 55 162-219 224-286 (478)
137 3rp8_A Flavoprotein monooxygen 91.6 0.26 8.8E-06 45.5 6.1 57 164-225 129-187 (407)
138 2zbw_A Thioredoxin reductase; 91.6 0.55 1.9E-05 41.7 8.2 53 164-219 193-251 (335)
139 3dk9_A Grase, GR, glutathione 91.6 0.58 2E-05 44.2 8.7 56 162-219 228-292 (478)
140 3h8l_A NADH oxidase; membrane 91.6 0.24 8E-06 45.8 5.8 52 162-219 218-269 (409)
141 3lzw_A Ferredoxin--NADP reduct 91.4 0.37 1.2E-05 42.8 6.7 53 164-218 69-121 (332)
142 3h28_A Sulfide-quinone reducta 91.2 0.14 4.9E-06 47.7 3.9 50 164-218 202-254 (430)
143 3cp8_A TRNA uridine 5-carboxym 91.1 0.32 1.1E-05 47.6 6.3 54 164-220 119-174 (641)
144 1jnr_A Adenylylsulfate reducta 91.1 0.45 1.6E-05 46.9 7.6 57 164-220 153-218 (643)
145 1dxl_A Dihydrolipoamide dehydr 91.0 0.44 1.5E-05 44.9 7.2 56 162-220 218-279 (470)
146 3fmw_A Oxygenase; mithramycin, 91.0 0.22 7.4E-06 48.4 5.1 60 164-226 150-214 (570)
147 1vdc_A NTR, NADPH dependent th 91.0 0.36 1.2E-05 42.9 6.3 52 164-219 72-123 (333)
148 3gwf_A Cyclohexanone monooxyge 90.8 0.41 1.4E-05 46.1 6.8 55 164-219 89-146 (540)
149 4ap3_A Steroid monooxygenase; 90.8 0.44 1.5E-05 46.0 7.0 55 164-219 101-158 (549)
150 3k30_A Histamine dehydrogenase 90.5 0.2 6.9E-06 49.9 4.4 55 164-220 569-624 (690)
151 3ab1_A Ferredoxin--NADP reduct 90.4 0.54 1.9E-05 42.4 7.0 54 164-219 76-130 (360)
152 2zbw_A Thioredoxin reductase; 90.4 0.54 1.8E-05 41.8 6.9 53 164-219 67-120 (335)
153 3klj_A NAD(FAD)-dependent dehy 90.3 0.41 1.4E-05 43.9 6.1 45 169-218 69-114 (385)
154 4b1b_A TRXR, thioredoxin reduc 90.2 0.63 2.2E-05 44.8 7.4 56 161-219 262-318 (542)
155 4g6h_A Rotenone-insensitive NA 90.1 0.5 1.7E-05 45.1 6.6 57 159-218 269-330 (502)
156 1fl2_A Alkyl hydroperoxide red 90.1 0.57 2E-05 41.1 6.7 56 164-219 58-114 (310)
157 3gyx_A Adenylylsulfate reducta 90.0 0.49 1.7E-05 46.7 6.6 57 164-220 168-233 (662)
158 1y56_A Hypothetical protein PH 89.9 0.4 1.4E-05 45.6 5.8 50 168-220 263-313 (493)
159 1kdg_A CDH, cellobiose dehydro 89.9 0.53 1.8E-05 45.4 6.8 59 167-227 200-268 (546)
160 1fl2_A Alkyl hydroperoxide red 89.9 0.61 2.1E-05 40.9 6.7 50 167-218 184-240 (310)
161 2xve_A Flavin-containing monoo 89.7 0.61 2.1E-05 44.0 6.8 55 164-219 103-165 (464)
162 2vou_A 2,6-dihydroxypyridine h 89.4 0.7 2.4E-05 42.4 6.9 58 164-226 101-160 (397)
163 3ic9_A Dihydrolipoamide dehydr 89.4 0.96 3.3E-05 42.9 8.0 54 163-220 216-274 (492)
164 3lzw_A Ferredoxin--NADP reduct 89.4 0.58 2E-05 41.4 6.2 50 167-219 194-249 (332)
165 3dgz_A Thioredoxin reductase 2 89.2 0.94 3.2E-05 42.9 7.8 56 162-219 225-286 (488)
166 3jsk_A Cypbp37 protein; octame 89.2 0.96 3.3E-05 40.6 7.3 57 164-220 162-251 (344)
167 2gv8_A Monooxygenase; FMO, FAD 89.2 0.65 2.2E-05 43.5 6.6 54 164-220 117-177 (447)
168 3kd9_A Coenzyme A disulfide re 89.1 0.61 2.1E-05 43.6 6.4 56 160-219 188-243 (449)
169 2q0l_A TRXR, thioredoxin reduc 89.1 1 3.5E-05 39.5 7.6 51 167-219 183-240 (311)
170 3oz2_A Digeranylgeranylglycero 89.1 0.74 2.5E-05 41.8 6.8 60 164-225 104-168 (397)
171 3uox_A Otemo; baeyer-villiger 88.8 0.67 2.3E-05 44.7 6.5 55 164-219 89-146 (545)
172 2gjc_A Thiazole biosynthetic e 88.6 1.3 4.4E-05 39.4 7.7 57 164-220 148-239 (326)
173 3s5w_A L-ornithine 5-monooxyge 88.5 1.6 5.4E-05 40.9 8.8 43 175-220 329-377 (463)
174 2q0l_A TRXR, thioredoxin reduc 87.8 1.1 3.6E-05 39.4 6.8 52 164-219 61-113 (311)
175 3sx6_A Sulfide-quinone reducta 87.8 0.93 3.2E-05 42.2 6.6 50 164-217 210-266 (437)
176 2jbv_A Choline oxidase; alcoho 87.5 0.71 2.4E-05 44.5 5.8 52 174-226 221-279 (546)
177 1hyu_A AHPF, alkyl hydroperoxi 87.2 0.99 3.4E-05 43.2 6.6 55 164-219 269-325 (521)
178 1vdc_A NTR, NADPH dependent th 86.9 1.5 5E-05 38.9 7.2 48 172-219 205-258 (333)
179 3pl8_A Pyranose 2-oxidase; sub 86.7 0.88 3E-05 44.6 6.0 52 176-227 274-331 (623)
180 2xdo_A TETX2 protein; tetracyc 86.7 0.54 1.9E-05 43.2 4.3 52 164-220 130-182 (398)
181 3f8d_A Thioredoxin reductase ( 86.5 1.1 3.8E-05 39.3 6.1 52 164-219 72-124 (323)
182 3itj_A Thioredoxin reductase 1 86.4 1.3 4.5E-05 39.2 6.6 52 164-219 86-141 (338)
183 1lvl_A Dihydrolipoamide dehydr 86.4 0.87 3E-05 42.8 5.6 51 164-219 214-267 (458)
184 1w4x_A Phenylacetone monooxyge 86.2 1.3 4.5E-05 42.6 6.9 55 164-219 96-153 (542)
185 2q7v_A Thioredoxin reductase; 86.2 1.8 6E-05 38.3 7.3 50 167-219 192-248 (325)
186 4eqs_A Coenzyme A disulfide re 86.1 0.89 3E-05 42.4 5.5 52 162-219 188-239 (437)
187 3cty_A Thioredoxin reductase; 86.1 1.4 5E-05 38.7 6.7 52 164-219 74-125 (319)
188 3c96_A Flavin-containing monoo 86.0 1.5 5E-05 40.4 6.9 58 164-225 109-175 (410)
189 3s5w_A L-ornithine 5-monooxyge 85.6 1.1 3.6E-05 42.1 5.8 55 164-218 129-190 (463)
190 3f8d_A Thioredoxin reductase ( 85.4 1.6 5.4E-05 38.3 6.6 56 168-226 195-257 (323)
191 1xhc_A NADH oxidase /nitrite r 85.1 1.6 5.3E-05 39.6 6.5 48 164-219 185-233 (367)
192 3hyw_A Sulfide-quinone reducta 84.6 0.69 2.4E-05 43.0 3.9 51 164-219 202-255 (430)
193 3d1c_A Flavin-containing putat 83.8 1.5 5.1E-05 39.5 5.7 53 164-219 216-271 (369)
194 1trb_A Thioredoxin reductase; 83.6 2.5 8.5E-05 37.1 7.0 52 164-219 64-115 (320)
195 3vrd_B FCCB subunit, flavocyto 83.4 0.41 1.4E-05 44.0 1.8 45 172-219 212-257 (401)
196 3fbs_A Oxidoreductase; structu 82.5 1.9 6.5E-05 37.3 5.7 60 152-219 165-225 (297)
197 2dkh_A 3-hydroxybenzoate hydro 82.1 2.9 9.8E-05 41.1 7.4 63 163-226 142-218 (639)
198 3qvp_A Glucose oxidase; oxidor 81.4 2.7 9.4E-05 40.7 6.8 53 174-226 239-299 (583)
199 2r0c_A REBC; flavin adenine di 81.3 3.1 0.00011 40.0 7.2 57 164-226 140-203 (549)
200 2q7v_A Thioredoxin reductase; 81.0 3.2 0.00011 36.5 6.8 54 164-219 67-122 (325)
201 1ps9_A 2,4-dienoyl-COA reducta 81.0 2.8 9.7E-05 41.4 7.0 50 166-220 577-628 (671)
202 4hb9_A Similarities with proba 80.9 1.8 6.2E-05 39.5 5.2 49 175-225 122-172 (412)
203 1xhc_A NADH oxidase /nitrite r 80.4 2.5 8.5E-05 38.3 5.8 43 172-219 70-112 (367)
204 2a87_A TRXR, TR, thioredoxin r 79.7 3 0.0001 37.0 6.1 51 164-219 73-125 (335)
205 1gpe_A Protein (glucose oxidas 79.6 2.2 7.4E-05 41.5 5.4 54 174-227 243-304 (587)
206 1q1r_A Putidaredoxin reductase 79.6 2.6 8.7E-05 39.2 5.8 45 170-219 68-113 (431)
207 1ju2_A HydroxynitrIle lyase; f 79.3 2.3 8E-05 40.7 5.5 56 172-227 204-268 (536)
208 1hyu_A AHPF, alkyl hydroperoxi 78.8 3.3 0.00011 39.5 6.4 50 167-218 395-451 (521)
209 1cjc_A Protein (adrenodoxin re 78.1 3.9 0.00013 38.3 6.5 44 175-219 270-332 (460)
210 3qfa_A Thioredoxin reductase 1 77.8 5.4 0.00019 38.0 7.6 57 162-219 250-314 (519)
211 3fbs_A Oxidoreductase; structu 77.5 3.7 0.00013 35.3 6.0 52 164-219 58-111 (297)
212 3ef6_A Toluene 1,2-dioxygenase 77.2 2.8 9.6E-05 38.5 5.2 43 172-219 67-110 (410)
213 3fim_B ARYL-alcohol oxidase; A 77.1 2.2 7.6E-05 41.2 4.6 53 174-226 220-282 (566)
214 3q9t_A Choline dehydrogenase a 77.0 3.5 0.00012 39.9 6.0 52 175-226 219-276 (577)
215 2gag_A Heterotetrameric sarcos 76.5 3.7 0.00013 42.5 6.4 50 169-219 323-382 (965)
216 2a87_A TRXR, TR, thioredoxin r 76.0 3.1 0.00011 36.8 5.1 45 172-219 201-251 (335)
217 4fk1_A Putative thioredoxin re 75.1 5 0.00017 34.9 6.1 54 164-219 62-116 (304)
218 4fk1_A Putative thioredoxin re 75.1 4.1 0.00014 35.5 5.5 50 164-216 182-232 (304)
219 1o94_A Tmadh, trimethylamine d 74.5 2.6 9E-05 42.1 4.5 49 166-219 575-645 (729)
220 3l8k_A Dihydrolipoyl dehydroge 72.6 5.6 0.00019 37.2 6.1 51 164-219 216-271 (466)
221 1gte_A Dihydropyrimidine dehyd 71.8 10 0.00035 39.5 8.3 48 169-218 377-440 (1025)
222 3t37_A Probable dehydrogenase; 71.2 6.5 0.00022 37.3 6.3 51 175-227 224-278 (526)
223 3lxd_A FAD-dependent pyridine 70.3 4.8 0.00017 36.9 5.0 45 169-218 72-117 (415)
224 2gqw_A Ferredoxin reductase; f 70.1 3.7 0.00013 37.7 4.2 42 173-219 70-112 (408)
225 3oc4_A Oxidoreductase, pyridin 69.3 7.2 0.00024 36.3 6.0 46 170-218 66-113 (452)
226 2x8g_A Thioredoxin glutathione 69.2 14 0.00049 35.7 8.4 56 164-220 328-395 (598)
227 2v3a_A Rubredoxin reductase; a 69.2 8.9 0.0003 34.7 6.5 43 172-219 70-112 (384)
228 2bc0_A NADH oxidase; flavoprot 69.1 7.3 0.00025 36.7 6.1 46 171-219 101-148 (490)
229 1nhp_A NADH peroxidase; oxidor 68.0 10 0.00036 35.1 6.8 46 171-219 65-114 (447)
230 2vdc_G Glutamate synthase [NAD 67.6 3.6 0.00012 38.6 3.5 48 169-219 309-377 (456)
231 3cgb_A Pyridine nucleotide-dis 67.2 12 0.00039 35.2 7.0 43 174-219 105-151 (480)
232 3hyw_A Sulfide-quinone reducta 67.1 5.2 0.00018 37.0 4.5 42 172-219 66-108 (430)
233 3ics_A Coenzyme A-disulfide re 66.9 12 0.0004 36.2 7.2 47 169-218 100-150 (588)
234 3r9u_A Thioredoxin reductase; 66.8 7.9 0.00027 33.5 5.5 52 164-218 64-116 (315)
235 2cdu_A NADPH oxidase; flavoenz 66.5 11 0.00037 35.0 6.6 46 171-219 67-116 (452)
236 4b63_A L-ornithine N5 monooxyg 65.9 11 0.00037 35.7 6.5 47 172-218 155-212 (501)
237 1m6i_A Programmed cell death p 64.9 4.1 0.00014 38.6 3.4 41 174-219 102-143 (493)
238 3g3e_A D-amino-acid oxidase; F 64.8 1.6 5.6E-05 39.0 0.5 44 163-220 143-186 (351)
239 1lqt_A FPRA; NADP+ derivative, 64.7 7 0.00024 36.5 4.9 42 175-219 265-325 (456)
240 3sx6_A Sulfide-quinone reducta 62.8 8.2 0.00028 35.7 5.0 47 168-220 65-112 (437)
241 3uox_A Otemo; baeyer-villiger 62.5 6.3 0.00022 37.8 4.2 46 168-221 344-392 (545)
242 3fg2_P Putative rubredoxin red 61.8 11 0.00039 34.3 5.7 44 169-218 64-108 (404)
243 3ntd_A FAD-dependent pyridine 61.8 14 0.00049 35.3 6.7 44 173-219 69-116 (565)
244 4eqs_A Coenzyme A disulfide re 61.6 11 0.00038 34.9 5.6 45 172-219 67-115 (437)
245 3h8l_A NADH oxidase; membrane 58.8 12 0.0004 34.2 5.3 48 167-219 61-112 (409)
246 3iwa_A FAD-dependent pyridine 56.0 16 0.00056 34.0 5.8 42 174-218 78-123 (472)
247 3gwf_A Cyclohexanone monooxyge 56.0 5.8 0.0002 38.0 2.7 43 173-222 341-386 (540)
248 1ebd_A E3BD, dihydrolipoamide 55.6 22 0.00074 32.9 6.6 48 166-219 95-144 (455)
249 4a5l_A Thioredoxin reductase; 55.5 26 0.00089 30.2 6.8 53 164-219 68-120 (314)
250 3vrd_B FCCB subunit, flavocyto 53.9 19 0.00066 32.5 5.8 43 172-220 65-108 (401)
251 3kd9_A Coenzyme A disulfide re 52.6 15 0.00051 34.0 4.9 41 173-218 70-112 (449)
252 2a8x_A Dihydrolipoyl dehydroge 51.8 24 0.00083 32.7 6.3 50 164-219 93-145 (464)
253 1c0p_A D-amino acid oxidase; a 51.5 6.5 0.00022 35.2 2.2 43 163-220 143-185 (363)
254 1pn0_A Phenol 2-monooxygenase; 50.3 30 0.001 34.0 6.9 29 164-192 121-152 (665)
255 4gcm_A TRXR, thioredoxin reduc 49.1 31 0.0011 29.8 6.2 52 164-219 64-115 (312)
256 3fpz_A Thiazole biosynthetic e 48.9 3.4 0.00012 36.5 -0.2 28 361-388 280-318 (326)
257 3klj_A NAD(FAD)-dependent dehy 47.8 4.5 0.00015 36.8 0.4 45 161-220 187-231 (385)
258 1dxl_A Dihydrolipoamide dehydr 46.2 31 0.0011 32.0 6.1 48 166-219 100-150 (470)
259 1y56_A Hypothetical protein PH 46.2 20 0.00067 33.8 4.7 44 174-219 172-218 (493)
260 4ap3_A Steroid monooxygenase; 44.8 14 0.00048 35.4 3.4 43 172-222 353-398 (549)
261 1v59_A Dihydrolipoamide dehydr 43.4 28 0.00095 32.5 5.2 50 165-220 99-157 (478)
262 3h28_A Sulfide-quinone reducta 42.4 24 0.00082 32.4 4.5 42 172-219 66-108 (430)
263 1ojt_A Surface protein; redox- 42.3 37 0.0013 31.7 5.9 48 166-219 99-159 (482)
264 2yqu_A 2-oxoglutarate dehydrog 40.6 30 0.001 32.0 5.0 47 167-219 94-140 (455)
265 2qae_A Lipoamide, dihydrolipoy 38.4 50 0.0017 30.6 6.1 48 166-219 97-147 (468)
266 3c4a_A Probable tryptophan hyd 37.3 11 0.00038 33.9 1.4 45 164-221 100-144 (381)
267 2gjc_A Thiazole biosynthetic e 37.2 6.3 0.00022 34.9 -0.3 26 363-388 282-318 (326)
268 2eq6_A Pyruvate dehydrogenase 36.4 50 0.0017 30.6 5.8 44 168-219 99-142 (464)
269 1zmd_A Dihydrolipoyl dehydroge 35.2 74 0.0025 29.4 6.8 46 168-219 103-151 (474)
270 3jsk_A Cypbp37 protein; octame 34.9 7.6 0.00026 34.7 -0.2 25 364-388 293-328 (344)
271 1w4x_A Phenylacetone monooxyge 34.8 24 0.00081 33.6 3.3 44 171-221 347-392 (542)
272 4a5l_A Thioredoxin reductase; 34.5 85 0.0029 26.8 6.7 46 172-219 198-249 (314)
273 1xdi_A RV3303C-LPDA; reductase 34.1 46 0.0016 31.2 5.2 52 166-219 99-155 (499)
274 1lvl_A Dihydrolipoamide dehydr 32.9 1.1E+02 0.0038 28.1 7.6 44 168-219 102-145 (458)
275 2r9z_A Glutathione amide reduc 31.6 76 0.0026 29.3 6.1 46 166-219 96-141 (463)
276 1fec_A Trypanothione reductase 30.1 71 0.0024 29.8 5.7 48 166-219 107-162 (490)
277 2hqm_A GR, grase, glutathione 29.9 62 0.0021 30.1 5.2 48 166-219 109-159 (479)
278 4a9w_A Monooxygenase; baeyer-v 29.8 37 0.0013 29.7 3.5 38 175-220 247-285 (357)
279 2gag_A Heterotetrameric sarcos 28.2 82 0.0028 32.5 6.2 52 165-219 184-252 (965)
280 3dk9_A Grase, GR, glutathione 26.7 83 0.0028 29.1 5.5 46 167-218 113-158 (478)
281 4b63_A L-ornithine N5 monooxyg 26.3 77 0.0026 29.7 5.2 17 203-219 392-408 (501)
282 1ges_A Glutathione reductase; 26.3 1E+02 0.0035 28.3 6.0 44 168-219 99-142 (450)
283 3l8k_A Dihydrolipoyl dehydroge 24.0 70 0.0024 29.6 4.4 44 169-218 96-142 (466)
284 1mo9_A ORF3; nucleotide bindin 23.4 93 0.0032 29.3 5.2 40 173-219 146-185 (523)
285 1zk7_A HGII, reductase, mercur 23.3 85 0.0029 28.9 4.8 43 171-219 103-149 (467)
286 2wpf_A Trypanothione reductase 23.0 88 0.003 29.2 4.9 47 167-219 112-166 (495)
287 1chu_A Protein (L-aspartate ox 22.6 36 0.0012 32.4 2.1 21 360-380 363-384 (540)
288 3lad_A Dihydrolipoamide dehydr 21.6 1.4E+02 0.0048 27.5 6.0 47 167-219 104-153 (476)
289 2csb_A Topoisomerase V, TOP61; 21.1 72 0.0025 26.8 3.3 37 95-131 350-388 (519)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.98 E-value=1.9e-29 Score=240.19 Aligned_cols=301 Identities=12% Similarity=0.084 Sum_probs=221.8
Q ss_pred CCCHhhhhcchhHHHHHhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHH
Q 016211 64 RLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI 143 (393)
Q Consensus 64 ~ls~~~k~~~~~~~~~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~ 143 (393)
.+++.++.++...+..... ...+++|+.+|++++ ++++.++.++.+++...++.+++++|+..++..+...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~--------~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 182 (425)
T 3ka7_A 112 LLSYKDRMKIALLIVSTRK--------NRPSGSSLQAWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM 182 (425)
T ss_dssp GSCHHHHHHHHHHHHHTTT--------SCCCSSBHHHHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhhhh--------cCCCCCCHHHHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH
Confidence 4677888765543332110 123689999999997 6667788999999999999999999999888877764
Q ss_pred HhhccCCcceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHH
Q 016211 144 ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQE 223 (393)
Q Consensus 144 ~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~ 223 (393)
... ....+++||++. ++++|++.+++.|++|++|++|++|..++ +++.+|+++|++++||+||+|+|++.+.+
T Consensus 183 ~~~----~~~~~~~gG~~~-l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 183 YRF----GGTGIPEGGCKG-IIDALETVISANGGKIHTGQEVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHH----CSCEEETTSHHH-HHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHH
T ss_pred Hhc----CCccccCCCHHH-HHHHHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHH
Confidence 221 124788999988 89999999999999999999999999987 56888888999999999999999999999
Q ss_pred Hhhccccc--CcHHHHhhccCCceeEEEEEEEeccCCCCCCCCcceeecCCC-ccccceehhhhcccccCCCCcEEEEEe
Q 016211 224 LIKNSILC--NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDS-LAWTFFDLNKIYDEHKDDSATVIQADF 300 (393)
Q Consensus 224 Ll~~~~~~--~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~ 300 (393)
|+++.... ...+.+.+.++.+.+++++++++++++.. .++.+++.+.. +.. +...|...+.+++++++++.+.+
T Consensus 256 ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~--~~~~~~~~~~~~~~~-~~~~s~~~p~~ap~G~~~l~~~~ 332 (425)
T 3ka7_A 256 LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG--HTGVLLTPYTRRING-VNEVTQADPELAPPGKHLTMCHQ 332 (425)
T ss_dssp HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC--SSSEEECCSSSSEEE-EECGGGTCGGGSCTTCEEEEEEE
T ss_pred hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccC--cCEEEECCChhhcce-EEeccCCCCCcCCCCCeEEEEEe
Confidence 98753210 13345677888888888999999998652 23444433322 222 33445566777766777776644
Q ss_pred ecCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEeccccccCC--
Q 016211 301 YHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRH-- 378 (393)
Q Consensus 301 ~~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~L~laGd~~~~~~-- 378 (393)
....+..+. .+++++.++++|++++|+.. .++ ..+.+|+.++|.+.+|+.. ++...+|++|||+||||+.+.+
T Consensus 333 ~~~~~~~~~-~~~~~~~~~~~l~~~~p~~~-~~~--~~v~~~~~~~P~~~~~~~~-~~~~~~p~~gL~laG~~~~~~gg~ 407 (425)
T 3ka7_A 333 YVAPENVKN-LESEIEMGLEDLKEIFPGKR-YEV--LLIQSYHDEWPVNRAASGT-DPGNETPFSGLYVVGDGAKGKGGI 407 (425)
T ss_dssp EECGGGGGG-HHHHHHHHHHHHHHHSTTCC-EEE--EEEEEEBTTBCSBSSCTTC-CCCSBCSSBTEEECSTTSCCTTCC
T ss_pred ccccccccc-hHHHHHHHHHHHHHhCCCCc-eEE--EEEEEECCCccccccccCC-CCCCCCCcCCeEEeCCccCCCCCC
Confidence 432222222 34567999999999999843 244 4678999999999998653 5677789999999999998744
Q ss_pred ---Cc-cccchhcc
Q 016211 379 ---GS-WSQVTFKL 388 (393)
Q Consensus 379 ---ga-~s~~~a~~ 388 (393)
|+ +|+.+|+.
T Consensus 408 gv~~~~~s~~~~~~ 421 (425)
T 3ka7_A 408 EVEGVALGVMSVME 421 (425)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 33 57777763
No 2
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.96 E-value=1.5e-28 Score=236.89 Aligned_cols=361 Identities=14% Similarity=0.137 Sum_probs=230.2
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCcc--cceeeccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAA 79 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~~ 79 (393)
|.+...++++.+|++++|++...... ...++..+|+... +........|.++..+++.+.+++.++++... .
T Consensus 65 ~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~ 138 (470)
T 3i6d_A 65 DSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHP---MPKGAVMGIPTKIAPFVSTGLFSLSGKARAAM---D 138 (470)
T ss_dssp CCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEE---CCC---------------------CCSHHHHH---H
T ss_pred hhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEE---CCCCcccCCcCchHHhhccCcCCHHHHHHHhc---C
Confidence 56778899999999999998665422 1222223554322 11100112344444455666677777765332 1
Q ss_pred HhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH------hhc------
Q 016211 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII------LAH------ 147 (393)
Q Consensus 80 ~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~------~~~------ 147 (393)
.... .....+++|+.+|+++. ++.+..+.++.|++.++++.+++++|+...+..+..+. ...
T Consensus 139 ~~~~-----~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (470)
T 3i6d_A 139 FILP-----ASKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRP 212 (470)
T ss_dssp HHSC-----CCSSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------
T ss_pred cccC-----CCCCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhcc
Confidence 1111 11235789999999985 88889999999999999999999999987665442110 000
Q ss_pred ---------cCCcceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecC
Q 016211 148 ---------QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVG 217 (393)
Q Consensus 148 ---------~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p 217 (393)
.....+.+++||++. +++.|++.+.+ ++|++|++|++|..+++ ++. |++ +|++++||+||+|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~g~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~~--~~~-v~~~~g~~~~ad~vi~a~p 286 (470)
T 3i6d_A 213 QGSGQQLTAKKQGQFQTLSTGLQT-LVEEIEKQLKL--TKVYKGTKVTKLSHSGS--CYS-LELDNGVTLDADSVIVTAP 286 (470)
T ss_dssp --------------EEEETTCTHH-HHHHHHHTCCS--EEEECSCCEEEEEECSS--SEE-EEESSSCEEEESEEEECSC
T ss_pred ccccccccccCCceEEEeCChHHH-HHHHHHHhcCC--CEEEeCCceEEEEEcCC--eEE-EEECCCCEEECCEEEECCC
Confidence 002245678899998 77888776543 79999999999998874 364 666 577899999999999
Q ss_pred hhhHHHHhhcccccCcHHHHhhccCCceeEEEEEEEeccCCCCCCCC--cceeecCCC--ccccceehhhhcccccCCCC
Q 016211 218 ISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVS--NACSGFGDS--LAWTFFDLNKIYDEHKDDSA 293 (393)
Q Consensus 218 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 293 (393)
++.+.+|+++++ ....+..+.+.++.++++.|+++++..... ..+...+.. +..+.++... .+...+.+.
T Consensus 287 ~~~~~~l~~~~~-----~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~-~~~~~p~~~ 360 (470)
T 3i6d_A 287 HKAAAGMLSELP-----AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKK-WPHAAPEGK 360 (470)
T ss_dssp HHHHHHHTTTST-----THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHH-CGGGSCTTC
T ss_pred HHHHHHHcCCch-----hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCc-CCCcCCCCC
Confidence 999999987642 124677888999999999999988732111 112211111 1122343222 233333344
Q ss_pred cEEEEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCC----CCCCCCCCCce
Q 016211 294 TVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNL 367 (393)
Q Consensus 294 ~l~~~~~~~--~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~----~~~~~~~~~~L 367 (393)
.++.+.+.. ++.+.+++++++++.++++|++++|... ++....+++|+++++.+.+|+... ++...++.+||
T Consensus 361 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~--~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l 438 (470)
T 3i6d_A 361 TLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNING--EPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGV 438 (470)
T ss_dssp EEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCS--CCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTE
T ss_pred EEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCC--CceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCE
Confidence 555554432 3446678999999999999999998643 677788899999999999986431 22233467899
Q ss_pred EEecccccc--CCCc-cccchhcc
Q 016211 368 FMAGDWITT--RHGS-WSQVTFKL 388 (393)
Q Consensus 368 ~laGd~~~~--~~ga-~s~~~a~~ 388 (393)
|+||||+.. .+|| .||++||+
T Consensus 439 ~~aG~~~~g~gv~~a~~sG~~aA~ 462 (470)
T 3i6d_A 439 YMTGASFEGVGIPDCIDQGKAAVS 462 (470)
T ss_dssp EECSTTTSCCSHHHHHHHHHHHHH
T ss_pred EEEeecCCCCCHHHHHHHHHHHHH
Confidence 999998875 6677 79988874
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.96 E-value=2.3e-28 Score=236.10 Aligned_cols=287 Identities=11% Similarity=0.054 Sum_probs=208.6
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhc-------------------------
Q 016211 93 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH------------------------- 147 (393)
Q Consensus 93 ~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~------------------------- 147 (393)
.+++|+.+|+++. +++++.+.++.|++.++++.+++++|+..++..+.......
T Consensus 141 ~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~ 219 (477)
T 3nks_A 141 EPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQA 219 (477)
T ss_dssp SSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHH
T ss_pred CCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhh
Confidence 4689999999985 88999999999999999999999999998876554321000
Q ss_pred -cCCcceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHHhh
Q 016211 148 -QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIK 226 (393)
Q Consensus 148 -~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~ 226 (393)
.....+.+++||++. ++++|++.+++.|++|++|++|++|..+++ +++.|+++++++.||+||+|+|++.+.+|++
T Consensus 220 ~~~~~~~~~~~gG~~~-l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~--~~~~v~~~~~~~~ad~vv~a~p~~~~~~ll~ 296 (477)
T 3nks_A 220 LAERWSQWSLRGGLEM-LPQALETHLTSRGVSVLRGQPVCGLSLQAE--GRWKVSLRDSSLEADHVISAIPASVLSELLP 296 (477)
T ss_dssp HHTTCSEEEETTCTTH-HHHHHHHHHHHTTCEEECSCCCCEEEECGG--GCEEEECSSCEEEESEEEECSCHHHHHHHSC
T ss_pred cccCccEEEECCCHHH-HHHHHHHHHHhcCCEEEeCCEEEEEEEcCC--ceEEEEECCeEEEcCEEEECCCHHHHHHhcc
Confidence 112246788999998 889999999999999999999999998763 3345777777899999999999999999987
Q ss_pred cccccCcHHHHhhccCCceeEEEEEEEeccCCCCCCCCcceeec--CCCccccceehhhhcccccCCCCcEEEEEeecC-
Q 016211 227 NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA- 303 (393)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 303 (393)
+.. ++..+.+.++.+.++.+++++|+++++.....+.+... +..+..++|+.+.......+++.+++.+.+...
T Consensus 297 ~~~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~ 373 (477)
T 3nks_A 297 AEA---APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSW 373 (477)
T ss_dssp GGG---HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHH
T ss_pred ccC---HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCcc
Confidence 642 34446778889999999999999987632222222211 112334467655543222223556665555421
Q ss_pred -C----CCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCCCCC----CCCCCCceEEecccc
Q 016211 304 -N----ELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMR----GFTSFPNLFMAGDWI 374 (393)
Q Consensus 304 -~----~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~----~~~~~~~L~laGd~~ 374 (393)
. +...++++++++.++++|+++++.. .++....+++|++++|.+.+|+...... .....+||++||||+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~--~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~ 451 (477)
T 3nks_A 374 LQTLEASGCVLSQELFQQRAQEAAATQLGLK--EMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASY 451 (477)
T ss_dssp HHHHHHSSCCCCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTT
T ss_pred ccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCC
Confidence 1 1224689999999999999999753 2677788999999999999997542111 111236899999998
Q ss_pred cc--CCCc-cccchhcc
Q 016211 375 TT--RHGS-WSQVTFKL 388 (393)
Q Consensus 375 ~~--~~ga-~s~~~a~~ 388 (393)
.. +++| .||++||+
T Consensus 452 ~G~gv~~a~~sg~~aA~ 468 (477)
T 3nks_A 452 EGVAVNDCIESGRQAAV 468 (477)
T ss_dssp SCCSHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 65 4566 79988875
No 4
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.96 E-value=1.7e-28 Score=236.87 Aligned_cols=361 Identities=13% Similarity=0.079 Sum_probs=241.3
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCcc--cceeeccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWM--KSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAA 79 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~~ 79 (393)
|.++..++++.+|++++|++...... ...+...+|+... +........|.++..+++.+.+++.+|+ .+..+
T Consensus 60 ~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~---~p~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~-- 133 (475)
T 3lov_A 60 DSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHP---IPKGAVMGIPTDLDLFRQTTLLTEEEKQ-EVADL-- 133 (475)
T ss_dssp CCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEE---CCSSEETTEESCHHHHTTCSSSCHHHHH-HHHHH--
T ss_pred hhhhcccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEE---CCCcccccCcCchHHHhhccCCChhHHH-HhhCc--
Confidence 56778899999999999998654322 1222223554322 1100001223343446677888888888 32211
Q ss_pred HhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH----------hhcc-
Q 016211 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAHQ- 148 (393)
Q Consensus 80 ~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~----------~~~~- 148 (393)
.... ........+++|+.+|+++. ++++..+.++.|++.++++.+++++|+...+..+..+. ....
T Consensus 134 -~~~~-~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~ 210 (475)
T 3lov_A 134 -LLHP-SDSLRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRP 210 (475)
T ss_dssp -HHSC-CTTCCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC
T ss_pred -ccCC-cccccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcc
Confidence 1111 11111245789999999985 88999999999999999999999999875555443211 0000
Q ss_pred -------------CCcceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEE
Q 016211 149 -------------KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVL 214 (393)
Q Consensus 149 -------------~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~ 214 (393)
.+..+.+++||++. ++++|++.+.+ ++|++|++|++|..++ +++. |++ +| +++||+||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~G~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~~-v~~~~g-~~~ad~vV~ 283 (475)
T 3lov_A 211 LDQLPQTPQTTIKATGQFLSLETGLES-LIERLEEVLER--SEIRLETPLLAISRED--GRYR-LKTDHG-PEYADYVLL 283 (475)
T ss_dssp --------------CCSEEEETTCHHH-HHHHHHHHCSS--CEEESSCCCCEEEEET--TEEE-EECTTC-CEEESEEEE
T ss_pred cccccccccccccCCCcEEeeCChHHH-HHHHHHhhccC--CEEEcCCeeeEEEEeC--CEEE-EEECCC-eEECCEEEE
Confidence 13456788999998 78888876644 7999999999999887 4454 666 46 899999999
Q ss_pred ecChhhHHHHhhcccccCcHHHHhhccCCceeEEEEEEEeccCCCCCCCC-cceeecCCC--ccccceehhhhcccccCC
Q 016211 215 AVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVS-NACSGFGDS--LAWTFFDLNKIYDEHKDD 291 (393)
Q Consensus 215 a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 291 (393)
|+|++.+.+|++..++ ..+.++.+.++.+++++|+++++.+... ..+...+.+ +..+.|+.+.. +... |
T Consensus 284 a~p~~~~~~ll~~~~~------~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~-~~~~-p 355 (475)
T 3lov_A 284 TIPHPQVVQLLPDAHL------PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKW-NHSA-P 355 (475)
T ss_dssp CSCHHHHHHHCTTSCC------HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHC-TTTC-T
T ss_pred CCCHHHHHHHcCccCH------HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccC-CCCC-C
Confidence 9999999999876531 3677888999999999999987322111 122221222 11223432222 2222 2
Q ss_pred CCcEEEEEee--cCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCC----CCCCCCCCC
Q 016211 292 SATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFP 365 (393)
Q Consensus 292 ~~~l~~~~~~--~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~----~~~~~~~~~ 365 (393)
+..++.+.+. .++.+.+++++++++.++++|++++|... +++...+++|+.+++.+.+|+... ++...++++
T Consensus 356 ~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~--~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~ 433 (475)
T 3lov_A 356 DHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTL--EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYP 433 (475)
T ss_dssp TEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCC--CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHST
T ss_pred CcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCC
Confidence 3344444343 23456678999999999999999998642 677888999999999999987421 222334678
Q ss_pred ceEEecccccc--CCCc-cccchhcc
Q 016211 366 NLFMAGDWITT--RHGS-WSQVTFKL 388 (393)
Q Consensus 366 ~L~laGd~~~~--~~ga-~s~~~a~~ 388 (393)
||||||+++.. .+|| .||++||+
T Consensus 434 ~l~~aG~~~~g~g~~~a~~sG~~aA~ 459 (475)
T 3lov_A 434 GIYLAGLAYDGVGLPDCVASAKTMIE 459 (475)
T ss_dssp TEEECSTTTSCSSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCCCCHHHHHHHHHHHHH
Confidence 99999998875 6677 79998874
No 5
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.95 E-value=7.4e-26 Score=215.02 Aligned_cols=333 Identities=12% Similarity=0.061 Sum_probs=216.4
Q ss_pred CCchHHHHHHHhCCCCCCCccc-c-eeeccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHHHHhhcC
Q 016211 7 PFRNIFSLVDELGIKPFTGWMK-S-AQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (393)
Q Consensus 7 ~y~~~~~Ll~elG~~~~~~~~~-~-~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~~~~~~~ 84 (393)
.+..+.++++++|+........ . .++ .+|+.+. + +.. ...+++.++.++...+......
T Consensus 61 ~~~~~~~l~~~lg~~~~~~~~~~~~~~~-~~g~~~~---~------~~~--------~~~l~~~~~~~~~~~~~~~~~~- 121 (421)
T 3nrn_A 61 EDGPLAHLLRILGAKVEIVNSNPKGKIL-WEGKIFH---Y------RES--------WKFLSVKEKAKALKLLAEIRMN- 121 (421)
T ss_dssp TSSHHHHHHHHHTCCCCEEECSSSCEEE-ETTEEEE---G------GGG--------GGGCC--------CCHHHHHTT-
T ss_pred CChHHHHHHHHhCCcceEEECCCCeEEE-ECCEEEE---c------CCc--------hhhCCHhHHHHHHHHHHHHHhc-
Confidence 4678999999999974432221 1 222 2554321 1 111 1235666666655433332210
Q ss_pred CCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhccCCcceEEecCCchhHh
Q 016211 85 NTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKI 164 (393)
Q Consensus 85 ~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~l 164 (393)
....+++|+.+|+++++++++.++.++.|++...++.+++++|+..++..+...... . ...+++||++. +
T Consensus 122 -----~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--g~~~~~gG~~~-l 191 (421)
T 3nrn_A 122 -----KLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRW--G--GPGLIRGGCKA-V 191 (421)
T ss_dssp -----CCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH--C--SCEEETTCHHH-H
T ss_pred -----cCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhc--C--CcceecCCHHH-H
Confidence 112356999999999767777788999999999999999999999888877765321 1 24789999988 8
Q ss_pred HHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCCc
Q 016211 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (393)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 244 (393)
+++|.+.+++.|++|++|++|++|..++ +++ |.++|++++||+||+|+|++.+.+|++.... .....+.+.++.+
T Consensus 192 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~-~~~~~~~~~~~~~ 266 (421)
T 3nrn_A 192 IDELERIIMENKGKILTRKEVVEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYF-DRDYLKQVDSIEP 266 (421)
T ss_dssp HHHHHHHHHTTTCEEESSCCEEEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGS-CHHHHHHHHTCCC
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccC-CHHHHHHHhCCCC
Confidence 9999999999999999999999999876 556 6668889999999999999999999974322 1234456788888
Q ss_pred eeEEEEEEEeccCCCCCCCCcceeecCCCccccceehhhhcccccCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHHhh
Q 016211 245 IDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSK 324 (393)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~l~~ 324 (393)
.++++++++++++.. . .++.+++.+..+.. +...+...+..++++.+++.+..... ..+.++.++.++++|++
T Consensus 267 ~~~~~v~l~~~~~~~-~-~~~~~~~~~~~~~~-i~~~s~~~p~~ap~G~~~~~~~~~~~----~~~~~~~~~~~~~~L~~ 339 (421)
T 3nrn_A 267 SEGIKFNLAVPGEPR-I-GNTIVFTPGLMING-FNEPSALDKSLAREGYTLIMAHMALK----NGNVKKAIEKGWEELLE 339 (421)
T ss_dssp CCEEEEEEEEESSCS-S-CSSEEECTTSSSCE-EECGGGTCGGGSCTTEEEEEEEEECT----TCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEcCCcc-c-CCeEEEcCCcceee-EeccCCCCCCcCCCCceEEEEEEeec----cccHHHHHHHHHHHHHH
Confidence 888999999998753 2 23445444433222 23345555555655556665543322 12344669999999999
Q ss_pred hhcCCCCCceeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEeccccccC-----CCc-cccchhcc
Q 016211 325 CIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTR-----HGS-WSQVTFKL 388 (393)
Q Consensus 325 ~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~L~laGd~~~~~-----~ga-~s~~~a~~ 388 (393)
++| . .+++ .+.+|..++|.+.+......+ .++ +|||+||||+.+. +|| .||.+||.
T Consensus 340 ~~p--~-~~~~--~~~~~~~~~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~ 401 (421)
T 3nrn_A 340 IFP--E-GEPL--LAQVYRDGNPVNRTRAGLHIE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALE 401 (421)
T ss_dssp HCT--T-CEEE--EEEEC-------------CCC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHH
T ss_pred HcC--C-CeEE--EeeeccCCCCcccccCCCCCC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHH
Confidence 999 2 2454 346687777776432211122 578 9999999999875 577 79999874
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.95 E-value=1.9e-27 Score=229.71 Aligned_cols=353 Identities=14% Similarity=0.061 Sum_probs=234.3
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCcc---c-ceeeccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWM---K-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLM 77 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~---~-~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~ 77 (393)
|.+...++++.++++++|++....+. . ..++..+|+.+. + |.+...+++.+.+++.++++++..
T Consensus 70 ~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~---------~--p~~~~~~~~~~~~~~~~~~~~~~~- 137 (478)
T 2ivd_A 70 NSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRS---------V--PASPPAFLASDILPLGARLRVAGE- 137 (478)
T ss_dssp CCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEEE---------C--CCSHHHHHTCSSSCHHHHHHHHGG-
T ss_pred hhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEECCEEEE---------C--CCCHHHhccCCCCCHHHHHHHhhh-
Confidence 45566789999999999997433221 1 122223554321 2 233333445566777777764321
Q ss_pred HHHhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhh-----------
Q 016211 78 AAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA----------- 146 (393)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~----------- 146 (393)
..+.. ....+++|+.+|+++. ++++..+.++.|++.+.++.+++++|+.+++..+..+...
T Consensus 138 --~~~~~-----~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (478)
T 2ivd_A 138 --LFSRR-----APEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRA 209 (478)
T ss_dssp --GGCCC-----CCTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHH
T ss_pred --hhcCC-----CCCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHh
Confidence 11110 1135789999999985 8899999999999999999999999998776554332100
Q ss_pred ----------ccCC----cceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCeEEe
Q 016211 147 ----------HQKN----FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYS 208 (393)
Q Consensus 147 ----------~~~~----~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ 208 (393)
...+ ....+++||++. ++++|++.+ |++|+++++|++|..+++ ++ .|++ +|++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~-l~~~l~~~l---g~~i~~~~~V~~i~~~~~--~~-~v~~~~~~~g~~~~ 282 (478)
T 2ivd_A 210 QKAQRQAALPAGTAPKLSGALSTFDGGLQV-LIDALAASL---GDAAHVGARVEGLAREDG--GW-RLIIEEHGRRAELS 282 (478)
T ss_dssp HHHHTCC----CCSCCCCCCEEEETTCTHH-HHHHHHHHH---GGGEESSEEEEEEECC----CC-EEEEEETTEEEEEE
T ss_pred hhccccccCcccccccccccEEEECCCHHH-HHHHHHHHh---hhhEEcCCEEEEEEecCC--eE-EEEEeecCCCceEE
Confidence 0112 456788999998 888888766 679999999999998763 35 3665 577899
Q ss_pred cCEEEEecChhhHHHHhhcccccCcHHHHhhccCCceeEEEEEEEeccCCCCC-CCCcceeec--CCCccccceehhhhc
Q 016211 209 AGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGF--GDSLAWTFFDLNKIY 285 (393)
Q Consensus 209 ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~ 285 (393)
||+||+|+|++.+.+|+++.+ ....+.++++.+.++.++++.++++++.. .....+... +....+++++.+..
T Consensus 283 ad~vV~a~~~~~~~~ll~~l~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~- 358 (478)
T 2ivd_A 283 VAQVVLAAPAHATAKLLRPLD---DALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTF- 358 (478)
T ss_dssp CSEEEECSCHHHHHHHHTTTC---HHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHC-
T ss_pred cCEEEECCCHHHHHHHhhccC---HHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccC-
Confidence 999999999999999987532 23345678888889999999999887522 111112111 11223334543332
Q ss_pred ccccCCCCcEEEEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCC----CCC
Q 016211 286 DEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMR 359 (393)
Q Consensus 286 ~~~~~~~~~l~~~~~~~--~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~----~~~ 359 (393)
+...+++..++.+.+.. ++.+.+.+++++.+.++++|++++|... ++....+++|+++.+.+.+|+... ++.
T Consensus 359 ~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~ 436 (478)
T 2ivd_A 359 PFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVTA--RPSFTRVFRWPLGIPQYNLGHLERVAAIDAA 436 (478)
T ss_dssp GGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEESSCCBCCBTTHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEECCCcccCCCcCHHHHHHHHHHH
Confidence 22232344555544432 2345567899999999999999998753 566667889999888888886321 111
Q ss_pred CCCCCCceEEecccccc--CCCc-cccchhcc
Q 016211 360 GFTSFPNLFMAGDWITT--RHGS-WSQVTFKL 388 (393)
Q Consensus 360 ~~~~~~~L~laGd~~~~--~~ga-~s~~~a~~ 388 (393)
..+ ++||||||+++.. .+|| .||.+||+
T Consensus 437 ~~~-~~~l~~aG~~~~g~gv~gA~~SG~~aA~ 467 (478)
T 2ivd_A 437 LQR-LPGLHLIGNAYKGVGLNDCIRNAAQLAD 467 (478)
T ss_dssp HHT-STTEEECSTTTSCCSHHHHHHHHHHHHH
T ss_pred Hhh-CCCEEEEccCCCCCCHHHHHHHHHHHHH
Confidence 122 6899999999843 6677 69998875
No 7
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.94 E-value=3.7e-27 Score=229.20 Aligned_cols=360 Identities=11% Similarity=0.065 Sum_probs=229.9
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCccc---ceeeccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWMK---SAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMA 78 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~ 78 (393)
|.+...++++.++++++|++....+.. ..++..+|+.+ +.|.+...+++...+++.+|++.+....
T Consensus 67 ~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~-----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (504)
T 1sez_A 67 NTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPV-----------LLPSNPIDLIKSNFLSTGSKLQMLLEPI 135 (504)
T ss_dssp CCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEE-----------ECCSSHHHHHHSSSSCHHHHHHHHTHHH
T ss_pred cccccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeEE-----------ECCCCHHHHhccccCCHHHHHHHhHhhh
Confidence 566677899999999999985433321 11222455432 1233433344556678888776443111
Q ss_pred HHhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH--------------
Q 016211 79 AVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII-------------- 144 (393)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~-------------- 144 (393)
.... ........+++|+.+|++++ ++++.++.++.|++.++++.+++++|+.+++..+..+.
T Consensus 136 --~~~~-~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~ 211 (504)
T 1sez_A 136 --LWKN-KKLSQVSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSK 211 (504)
T ss_dssp --HC-----------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHT
T ss_pred --ccCc-ccccccCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhh
Confidence 1000 00000123679999999986 88999999999999999999999999987654433210
Q ss_pred hhcc---------------CCcceEEecCCchhHhHHHHHHHHHHcC-CeEecCceeeeEEecCCCCe----EEEEEe--
Q 016211 145 LAHQ---------------KNFDLVWCRGTLREKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCC----ISDVVC-- 202 (393)
Q Consensus 145 ~~~~---------------~~~~~~~~~gG~~~~l~~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~----v~~v~~-- 202 (393)
+... ......+++||+++ |+++|++.+ + ++|++|++|++|..+++ +. .+.|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~-l~~~l~~~l---~~~~i~~~~~V~~I~~~~~-~~~~~~~~~v~~~~ 286 (504)
T 1sez_A 212 LSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQT-LTDAICKDL---REDELRLNSRVLELSCSCT-EDSAIDSWSIISAS 286 (504)
T ss_dssp TC----------CCCSCCSTTCSCBEETTCTHH-HHHHHHTTS---CTTTEETTCCEEEEEEECS-SSSSSCEEEEEEBC
T ss_pred hcccccccccccchhhccccCCceEeeCcHHHH-HHHHHHhhc---ccceEEcCCeEEEEEecCC-CCcccceEEEEEcC
Confidence 0000 01135678999998 778887644 4 78999999999998874 21 133554
Q ss_pred -CC---eEEecCEEEEecChhhHHHHhhc---ccccCcHHHHhhccCCceeEEEEEEEeccCCCCCCC--CcceeecCC-
Q 016211 203 -GK---ETYSAGAVVLAVGISTLQELIKN---SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV--SNACSGFGD- 272 (393)
Q Consensus 203 -~g---~~~~ad~VI~a~p~~~~~~Ll~~---~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~--~~~~~~~~~- 272 (393)
+| ++++||+||+|+|+..+.+|+.. .++. ++ .+.++.+.++.+++++|+++++.... ...++....
T Consensus 287 ~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~-~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~ 362 (504)
T 1sez_A 287 PHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFL-LN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQ 362 (504)
T ss_dssp SSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCC-CT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGG
T ss_pred CCCccceeEECCEEEECCCHHHHHHHhhcccCCccc-HH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCC
Confidence 34 57899999999999999998842 1111 11 26677888899999999998763211 111111110
Q ss_pred ----CccccceehhhhcccccCCCCcEEEEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCc
Q 016211 273 ----SLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSL 346 (393)
Q Consensus 273 ----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~ 346 (393)
.+..+++. +...+...+++..++.+.... +..|..++++++++.++++|++++|... ++....+.+|+.++
T Consensus 363 ~~g~~~~~~~~~-s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~--~p~~~~~~~w~~~~ 439 (504)
T 1sez_A 363 QHGLKTLGTLFS-SMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEG--EPTYVNHLYWSKAF 439 (504)
T ss_dssp GGTCCSSEEEEH-HHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCS--CCSSEEEEEEEEEE
T ss_pred CCCCccceEEee-ccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEeECCCCC
Confidence 11122332 223333333334454433332 3456678999999999999999998632 56677888999998
Q ss_pred cccCCCCcCCCC---CCCCCCCceEEecccccc--CCCc-cccchhcc
Q 016211 347 THFFPGSYKYMM---RGFTSFPNLFMAGDWITT--RHGS-WSQVTFKL 388 (393)
Q Consensus 347 ~~~~~g~~~~~~---~~~~~~~~L~laGd~~~~--~~ga-~s~~~a~~ 388 (393)
+.+.+|+....+ ...++++||||||++++. .+|| .||.+||.
T Consensus 440 p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~~v~gai~sG~~aA~ 487 (504)
T 1sez_A 440 PLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAAD 487 (504)
T ss_dssp ECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHH
T ss_pred CccCcCHHHHHHHHHHHHHhCCCEEEEeecCCCCCHHHHHHHHHHHHH
Confidence 999888643211 123567899999999874 6677 79998874
No 8
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.94 E-value=5.4e-26 Score=221.75 Aligned_cols=283 Identities=15% Similarity=0.096 Sum_probs=194.9
Q ss_pred cccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHH-----HhhccCCcceEEecCCchhHhHH
Q 016211 92 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKIFE 166 (393)
Q Consensus 92 ~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~-----~~~~~~~~~~~~~~gG~~~~l~~ 166 (393)
.++++|+.+|+++++.++. .+.++.+++.+.++.+++++|+..++..+... +.....+....+++||++. +++
T Consensus 142 ~~~~~s~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~-l~~ 219 (520)
T 1s3e_A 142 EWDNMTMKELLDKLCWTES-AKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQ-VSE 219 (520)
T ss_dssp HHHTSBHHHHHHHHCSSHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHH-HHH
T ss_pred hhhccCHHHHHHhhCCCHH-HHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHH-HHH
Confidence 3678999999999866665 57899999999999999999999887665431 0111123345778999998 788
Q ss_pred HHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCCce
Q 016211 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 245 (393)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 245 (393)
+|++.+ |++|++|++|++|..++ +++. |++ +|+++.||+||+|+|+..+.+|+..+.++ ....+.++++.+.
T Consensus 220 ~l~~~l---g~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~ 292 (520)
T 1s3e_A 220 RIMDLL---GDRVKLERPVIYIDQTR--ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLG 292 (520)
T ss_dssp HHHHHH---GGGEESSCCEEEEECSS--SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBC
T ss_pred HHHHHc---CCcEEcCCeeEEEEECC--CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCc
Confidence 887655 78999999999999877 4465 666 67889999999999999988886544331 2233567888888
Q ss_pred eEEEEEEEeccCCCCCCCCcce-e-ecCCCccccceehhhhcccccCCCCcEEEEEee--cCCCCCCCCHHHHHHHHHHH
Q 016211 246 DVVSVKLWFDKKVTVPNVSNAC-S-GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSY 321 (393)
Q Consensus 246 ~~~~v~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~e~~~~~~~~ 321 (393)
++.++++.|++++|........ + .........+++.+.. +.+..++...+. .++.|.+++++++++.++++
T Consensus 293 ~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~-----~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~ 367 (520)
T 1s3e_A 293 SVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKP-----EGNYAAIMGFILAHKARKLARLTKEERLKKLCEL 367 (520)
T ss_dssp CEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECCCT-----TSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCCCC-----CCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHH
Confidence 9999999999998732211111 1 0111112234443321 112244433232 23567778999999999999
Q ss_pred HhhhhcCCCCCceeeeEEeecCCC-----cc--ccCCCCc-CCCCCCCCCCCceEEecccccc-----CCCc-cccchhc
Q 016211 322 LSKCIKDFSTATVMDHKIRRFPKS-----LT--HFFPGSY-KYMMRGFTSFPNLFMAGDWITT-----RHGS-WSQVTFK 387 (393)
Q Consensus 322 l~~~~p~~~~~~~~~~~~~~~~~a-----~~--~~~~g~~-~~~~~~~~~~~~L~laGd~~~~-----~~ga-~s~~~a~ 387 (393)
|++++|......+....+++|... .+ .+.||.. .+++..++|++||||||+++++ ++|| .||++||
T Consensus 368 L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA 447 (520)
T 1s3e_A 368 YAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAA 447 (520)
T ss_dssp HHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHH
T ss_pred HHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHH
Confidence 999998531125666677777532 12 2455643 2344567889999999998853 6677 7999988
Q ss_pred c
Q 016211 388 L 388 (393)
Q Consensus 388 ~ 388 (393)
+
T Consensus 448 ~ 448 (520)
T 1s3e_A 448 R 448 (520)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.93 E-value=1e-25 Score=216.10 Aligned_cols=279 Identities=12% Similarity=0.105 Sum_probs=191.5
Q ss_pred cccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcc-cccHHHHHHHHHHH-----HhhccCCcceEEecCCchhHhH
Q 016211 92 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKIF 165 (393)
Q Consensus 92 ~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~s~~~~~~~~~~~-----~~~~~~~~~~~~~~gG~~~~l~ 165 (393)
.++++|+.+|+++++.++. .+.++.+++.+.++.+++ ++|+..++..+... +.. ..+....+++||++. ++
T Consensus 142 ~~~~~s~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG~~~-l~ 218 (453)
T 2yg5_A 142 DLDTVSFKQWLINQSDDAE-ARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGGMQQ-VS 218 (453)
T ss_dssp HHHSSBHHHHHHHHCSCHH-HHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTCTHH-HH
T ss_pred hhhhccHHHHHHhhcCCHH-HHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCChHH-HH
Confidence 4678999999999866665 567899999888999999 99999887665431 000 001234678999998 78
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCe-EEEEEeCCeEEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCCc
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCC-ISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~-v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 244 (393)
++|++.+ |++|++|++|++|..++ ++ +. |+++|+++.||+||+|+|+..+.+|+..+.++ ....+.++++.+
T Consensus 219 ~~l~~~l---g~~i~~~~~V~~i~~~~--~~~v~-v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~~ 291 (453)
T 2yg5_A 219 IRMAEAL---GDDVFLNAPVRTVKWNE--SGATV-LADGDIRVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQSL 291 (453)
T ss_dssp HHHHHHH---GGGEECSCCEEEEEEET--TEEEE-EETTTEEEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEEE
T ss_pred HHHHHhc---CCcEEcCCceEEEEEeC--CceEE-EEECCeEEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCCC
Confidence 8887655 78999999999999877 44 54 66788899999999999999988886544331 223356777888
Q ss_pred eeEEEEEEEeccCCCCCCCC-cceeecCCCccccceehhhhcccccCCC-CcEEEEEee--cCCCCCCCCHHHHHHHHHH
Q 016211 245 IDVVSVKLWFDKKVTVPNVS-NACSGFGDSLAWTFFDLNKIYDEHKDDS-ATVIQADFY--HANELMPLKDDQVVAKAVS 320 (393)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~--~~~~~~~~~~~e~~~~~~~ 320 (393)
.++.++++.|++++|..... +.++..+..+ .++++.+.. ++ ..++.+.+. .++.|.+++++++++.+++
T Consensus 292 ~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~-~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 364 (453)
T 2yg5_A 292 GLVIKVHAVYETPFWREDGLSGTGFGASEVV-QEVYDNTNH------EDDRGTLVAFVSDEKADAMFELSAEERKATILA 364 (453)
T ss_dssp CCEEEEEEEESSCGGGGGTEEEEEECTTSSS-CEEEECCCT------TCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHH
T ss_pred cceEEEEEEECCCCCCCCCCCceeecCCCCe-EEEEeCCCC------CCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHH
Confidence 88899999999988732111 1111112222 234443311 12 234433232 2345666789999999999
Q ss_pred HHhhhhcCCCCCceeeeEEeecCCC-----c--cccCCCCc-CCCCCCCCCCCceEEecccccc-----CCCc-cccchh
Q 016211 321 YLSKCIKDFSTATVMDHKIRRFPKS-----L--THFFPGSY-KYMMRGFTSFPNLFMAGDWITT-----RHGS-WSQVTF 386 (393)
Q Consensus 321 ~l~~~~p~~~~~~~~~~~~~~~~~a-----~--~~~~~g~~-~~~~~~~~~~~~L~laGd~~~~-----~~ga-~s~~~a 386 (393)
+|++++|.-. .+++...+++|... . +.+.||.. ..++..++|++||||||+++++ ++|| .||++|
T Consensus 365 ~L~~~~~~~~-~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~a 443 (453)
T 2yg5_A 365 SLARYLGPKA-EEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRT 443 (453)
T ss_dssp HHHHHHCGGG-GCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHH
T ss_pred HHHHHhCccC-CCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHH
Confidence 9999997521 24556666777532 1 23456642 2334567889999999999863 6677 699999
Q ss_pred cc
Q 016211 387 KL 388 (393)
Q Consensus 387 ~~ 388 (393)
|+
T Consensus 444 A~ 445 (453)
T 2yg5_A 444 AA 445 (453)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 10
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.91 E-value=4.7e-24 Score=206.82 Aligned_cols=279 Identities=12% Similarity=0.046 Sum_probs=192.7
Q ss_pred hcccCccHHHHHHHcC--CCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH---hhccCCcceEEecCCchhHhH
Q 016211 91 RKYDSITARELFKQFG--CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LAHQKNFDLVWCRGTLREKIF 165 (393)
Q Consensus 91 ~~~d~~s~~~~l~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~---~~~~~~~~~~~~~gG~~~~l~ 165 (393)
..++++|+.+|+++.+ +++.. +.++.+++...++.+++++|+..++..+.... ...........++||++. ++
T Consensus 181 ~~~~~~s~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~-l~ 258 (495)
T 2vvm_A 181 RKYDEMSYSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSA-FA 258 (495)
T ss_dssp HHHHTSBHHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHH-HH
T ss_pred hhhhhhhHHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHH-HH
Confidence 4567899999999876 77765 68999999999999999999998876654310 000001234668899998 88
Q ss_pred HHHHHHHHHcC-CeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCC
Q 016211 166 EPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 243 (393)
Q Consensus 166 ~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~ 243 (393)
++|.+.+++.| ++|++|++|++|..++ +++. |++ +|++++||+||+|+|+..+.+|...+.++ ....+.++.+.
T Consensus 259 ~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~~ 334 (495)
T 2vvm_A 259 RRFWEEAAGTGRLGYVFGCPVRSVVNER--DAAR-VTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAGH 334 (495)
T ss_dssp HHHHHHHHTTTCEEEESSCCEEEEEECS--SSEE-EEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHCC
T ss_pred HHHHHHhhhcCceEEEeCCEEEEEEEcC--CEEE-EEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhcC
Confidence 99999999888 8999999999999876 3464 666 56789999999999999998876443331 23335677888
Q ss_pred ceeEEEEEEEeccCCCCCCCCcceeecCCCccccceehhhhcccccCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHHh
Q 016211 244 SIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLS 323 (393)
Q Consensus 244 ~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~l~ 323 (393)
+.++.++++.|++++|. ....+...+.++.+ +++.+. .+.+..++.+ +..... .+++++..+.++++|+
T Consensus 335 ~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~-~~~~~~-----~~~~~~vl~~-~~~~~~--~~~~~e~~~~~~~~L~ 403 (495)
T 2vvm_A 335 VSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCY-AIGDGT-----TPAGNTHLVC-FGNSAN--HIQPDEDVRETLKAVG 403 (495)
T ss_dssp CCCCEEEEEEESCGGGG--GEEEEECSSCSSCE-EEEEEE-----CTTSCEEEEE-EECSTT--CCCTTTCHHHHHHHHH
T ss_pred CCceeEEEEEECCccCC--CceeEecCCCCcEE-EecCCC-----CCCCCeEEEE-EeCccc--cCCCHHHHHHHHHHHH
Confidence 88899999999998762 21112111223322 333221 1123344433 333222 1455667788999999
Q ss_pred hhhcCCCCCceeeeEEeecC------CCccccCCCCc-CCCCCCCCCCCceEEecccccc-----CCCc-cccchhcc
Q 016211 324 KCIKDFSTATVMDHKIRRFP------KSLTHFFPGSY-KYMMRGFTSFPNLFMAGDWITT-----RHGS-WSQVTFKL 388 (393)
Q Consensus 324 ~~~p~~~~~~~~~~~~~~~~------~a~~~~~~g~~-~~~~~~~~~~~~L~laGd~~~~-----~~ga-~s~~~a~~ 388 (393)
+++|... ++....+++|. ++...+.||.. ..++..++|.+||||||+++++ ++|| .||+|||.
T Consensus 404 ~~~~~~~--~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~ 479 (495)
T 2vvm_A 404 QLAPGTF--GVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAAR 479 (495)
T ss_dssp TTSTTSC--CEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHH
T ss_pred HhcCCCC--CceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHH
Confidence 9998743 57777778885 34444567754 2233445688999999999974 6678 69999984
No 11
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.90 E-value=1.7e-23 Score=201.50 Aligned_cols=352 Identities=11% Similarity=0.021 Sum_probs=221.2
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCcccceeeccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHHHHh
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVI 81 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~~~~ 81 (393)
|.++..++.+.+|+++++ +..........+..+|+.+ +.|++.. ...++..++++++.-+....
T Consensus 65 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~g~~~-----------~~P~~~~----~~~l~~~~~~~~~~~ll~~~ 128 (484)
T 4dsg_A 65 HVIFSHYQYFDDVMDWAV-QGWNVLQRESWVWVRGRWV-----------PYPFQNN----IHRLPEQDRKRCLDELVRSH 128 (484)
T ss_dssp CCBCCSBHHHHHHHHHHC-SCEEEEECCCEEEETTEEE-----------ESSGGGC----GGGSCHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHh-hhhhhccCceEEEECCEEE-----------EeCccch----hhhCCHHHHHHHHHHHHHHH
Confidence 677889999999999986 3221111122222356532 1232211 12356666665443222111
Q ss_pred hcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHH---------HHHHHHHHhhcc----
Q 016211 82 DFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAAT---------LGILYFIILAHQ---- 148 (393)
Q Consensus 82 ~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~---------~~~~~~~~~~~~---- 148 (393)
. . ....+++|+.+|++++ +++++++.++.|++.++|+.+++++|+.++ ..+++..+....
T Consensus 129 ~-~-----~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~ 201 (484)
T 4dsg_A 129 A-R-----TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGW 201 (484)
T ss_dssp H-C-----CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCC
T ss_pred h-c-----cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCC
Confidence 0 0 1124789999999996 899999999999999999999999998642 223333321111
Q ss_pred -CCcceEEec-CCchhHhHHHHHHHHHHcCCeEecC--ceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHH
Q 016211 149 -KNFDLVWCR-GTLREKIFEPWMDSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQEL 224 (393)
Q Consensus 149 -~~~~~~~~~-gG~~~~l~~~l~~~l~~~G~~i~l~--~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~L 224 (393)
....+.|+. ||++. ++++|++.+.+ .+|+++ ++|++|..++ ++|. ..+|+++.||+||+|+|++.+.++
T Consensus 202 ~~~~~f~yp~~gG~~~-l~~~la~~l~~--~~i~~~~~~~V~~I~~~~--~~v~--~~~G~~~~ad~VI~a~p~~~~~~l 274 (484)
T 4dsg_A 202 GPNATFRFPQRGGTGI-IYQAIKEKLPS--EKLTFNSGFQAIAIDADA--KTIT--FSNGEVVSYDYLISTVPFDNLLRM 274 (484)
T ss_dssp STTSEEEEESSSCTHH-HHHHHHHHSCG--GGEEECGGGCEEEEETTT--TEEE--ETTSCEEECSEEEECSCHHHHHHH
T ss_pred CccceEEeecCCCHHH-HHHHHHhhhhh--CeEEECCCceeEEEEecC--CEEE--ECCCCEEECCEEEECCCHHHHHHH
Confidence 123456765 89998 88999887754 289999 5799999876 4442 246888999999999999999999
Q ss_pred hhcc--cccCcHHHHhhccCCceeEEEEEEEeccCCCCC-CCCcceeecCC--CccccceehhhhcccccCCCCcEEEEE
Q 016211 225 IKNS--ILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFGD--SLAWTFFDLNKIYDEHKDDSATVIQAD 299 (393)
Q Consensus 225 l~~~--~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~ 299 (393)
+.+. ++ .+...+.+.++.|.++.+++++++++.... .+...++-.+. .+.. +...++..+..++++.+++.+.
T Consensus 275 l~~~~~~~-~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~r-i~~~s~~~p~~ap~g~~~l~~e 352 (484)
T 4dsg_A 275 TKGTGFKG-YDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYR-ATVFSNYSKYNVPEGHWSLMLE 352 (484)
T ss_dssp EECSSCTT-GGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSE-EECGGGTCGGGSCTTEEEEEEE
T ss_pred hhccCCCC-CHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEE-EEeecCCCcccCCCCeEEEEEE
Confidence 8651 11 123334678899999999999999874311 11222322222 2211 1223344444443444554443
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCC----CCCCCCCCCceEEecc---
Q 016211 300 FYHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGD--- 372 (393)
Q Consensus 300 ~~~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~----~~~~~~~~~~L~laGd--- 372 (393)
++.. +....+++++++.++++|.++..--.+..+...++.+|+.++|.|.+|+... +..... . ||+++|.
T Consensus 353 ~~~~-~~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~ 429 (484)
T 4dsg_A 353 VSES-KYKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGA 429 (484)
T ss_dssp EEEB-TTBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTT
T ss_pred EecC-cCCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHh-C-CcEeecCCcc
Confidence 4333 3446789999999999999985322222455667889999999999997532 222222 3 9999998
Q ss_pred ccc---cCCCc-cccchhcc
Q 016211 373 WIT---TRHGS-WSQVTFKL 388 (393)
Q Consensus 373 ~~~---~~~ga-~s~~~a~~ 388 (393)
|-. ..+.+ .+|.+||.
T Consensus 430 ~~y~v~~~d~~i~sg~~aa~ 449 (484)
T 4dsg_A 430 WRYEVGNQDHSFMQGVEAID 449 (484)
T ss_dssp CCGGGCSHHHHHHHHHHHHH
T ss_pred cccCCCChHHHHHHHHHHHH
Confidence 555 23445 67777764
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.89 E-value=5.3e-23 Score=200.35 Aligned_cols=351 Identities=12% Similarity=0.060 Sum_probs=220.2
Q ss_pred cccCCCCchHHHHHHHhCCCCCCC-cc-cc-eeeccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchh-HH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTG-WM-KS-AQYSEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLP-LM 77 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~-~~-~~-~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~-~~ 77 (393)
|.|+..++++.+|++++|...... .. +. .++ .+|+.+ +.|+.. ....++..++.+... ++
T Consensus 66 h~~~~~~~~v~~l~~e~~~~~~~~~~~~~~~~i~-~~g~~~-----------~~p~~~----~~~~~~~~~~~~~~~~~~ 129 (513)
T 4gde_A 66 HVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVR-CQGQWV-----------PYPFQN----NISMLPKEEQVKCIDGMI 129 (513)
T ss_dssp CCCCCCBHHHHHHHHHHSCSGGGEEEEECCEEEE-ETTEEE-----------ESSGGG----GGGGSCHHHHHHHHHHHH
T ss_pred eEecCCCHHHHHHHHHhCCccceeEEecCceEEE-ECCeEe-----------ecchhh----hhhhcchhhHHHHHHHHH
Confidence 889999999999999998864321 11 22 233 356532 123321 111234444444322 11
Q ss_pred HHHhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHH---------HHHHHHhhcc
Q 016211 78 AAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLG---------ILYFIILAHQ 148 (393)
Q Consensus 78 ~~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~---------~~~~~~~~~~ 148 (393)
..... ......+..|+.+|+.+. +++++++.++.|++.++++.+++++|+.++.. .+...+....
T Consensus 130 ~~~~~-----~~~~~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (513)
T 4gde_A 130 DAALE-----ARVANTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKT 203 (513)
T ss_dssp HHHHH-----HHTCCSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCC
T ss_pred HHHHh-----hhcccccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhccc
Confidence 11111 111234678999999985 88999999999999999999999998764321 1122111111
Q ss_pred C-----CcceEEe-cCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHH
Q 016211 149 K-----NFDLVWC-RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQ 222 (393)
Q Consensus 149 ~-----~~~~~~~-~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~ 222 (393)
. ...+.++ +||++. ++++|++.|++.|++|++|++|++|..++ +++ +..+|+++.||+||+|+|++.+.
T Consensus 204 ~~~~~~~~~~~~~~~gG~~~-l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~v--~~~~G~~~~ad~vI~t~P~~~l~ 278 (513)
T 4gde_A 204 AGNWGPNATFRFPARGGTGG-IWIAVANTLPKEKTRFGEKGKVTKVNANN--KTV--TLQDGTTIGYKKLVSTMAVDFLA 278 (513)
T ss_dssp CCSCBTTBEEEEESSSHHHH-HHHHHHHTSCGGGEEESGGGCEEEEETTT--TEE--EETTSCEEEEEEEEECSCHHHHH
T ss_pred ccccccccceeecccCCHHH-HHHHHHHHHHhcCeeeecceEEEEEEccC--CEE--EEcCCCEEECCEEEECCCHHHHH
Confidence 1 1223444 799998 88999999999999999999999999876 443 34478999999999999999999
Q ss_pred HHhhcccccCcHHHHhhccCCceeEEEEEEEeccCCCCC-CCCcceeecCCC--ccccceehhhhcccccC---------
Q 016211 223 ELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFGDS--LAWTFFDLNKIYDEHKD--------- 290 (393)
Q Consensus 223 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------- 290 (393)
+++++.. .......+.|.++.+|.+.++...... .+...++-.+.. +.. +...++..+...+
T Consensus 279 ~~l~~~~-----~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~R-i~~~~n~sp~~~p~~~~~~~~~ 352 (513)
T 4gde_A 279 EAMNDQE-----LVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYR-ATIFSNYSPYNQPEASAALPTM 352 (513)
T ss_dssp HHTTCHH-----HHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSE-EECGGGTCGGGSCCTTCCEECC
T ss_pred HhcCchh-----hHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeE-EEecCCCCcccCCCCCceEEEE
Confidence 9887532 123557788999889999987654311 111112111111 111 1111111111111
Q ss_pred ------------CCCcEEEEEee--cCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCC
Q 016211 291 ------------DSATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY 356 (393)
Q Consensus 291 ------------~~~~l~~~~~~--~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~ 356 (393)
++..++...+. ..++...++++++++.++++|.++.+.....+++..++.||++++|.|..|+...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~ 432 (513)
T 4gde_A 353 QLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGT 432 (513)
T ss_dssp EETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHH
T ss_pred EeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHH
Confidence 11111111111 2345567899999999999999998755445788999999999999999987542
Q ss_pred ----CCCCCCCCCceEEec---cccc---cCCCc-cccchhc
Q 016211 357 ----MMRGFTSFPNLFMAG---DWIT---TRHGS-WSQVTFK 387 (393)
Q Consensus 357 ----~~~~~~~~~~L~laG---d~~~---~~~ga-~s~~~a~ 387 (393)
++..+. +|||++| .|.. +..+| ++|-.||
T Consensus 433 ~~~~~~~l~~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa 472 (513)
T 4gde_A 433 LTQILPKLQD--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAV 472 (513)
T ss_dssp HHHHHHHHHH--TTEEECSTTTTCCGGGCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhh--cCcEEecCCcccCcCCCCHHHHHHHHHHHH
Confidence 222222 5999999 4433 34455 6776665
No 13
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.89 E-value=5.1e-22 Score=192.84 Aligned_cols=280 Identities=11% Similarity=0.055 Sum_probs=148.6
Q ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhccCCcceEEecCCchhHhHHHHHHHHHHc
Q 016211 96 ITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 175 (393)
Q Consensus 96 ~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~ 175 (393)
.|+.++++++..++. ++.++..... .++.++.+.++...+ +... .. ....++++||++. |+++|++.+++.
T Consensus 164 ~~~~~~~~~~~~~~~-l~~~l~~~~~-~~g~~p~~~~~~~~~--~~~~--~~--~~G~~~p~GG~~~-l~~aL~~~~~~~ 234 (501)
T 4dgk_A 164 RSVYSKVASYIEDEH-LRQAFSFHSL-LVGGNPFATSSIYTL--IHAL--ER--EWGVWFPRGGTGA-LVQGMIKLFQDL 234 (501)
T ss_dssp HHHHHHHHTTCCCHH-HHHHHHHHHH-HHHSCC--CCCTHHH--HHHH--HS--CCCEEEETTHHHH-HHHHHHHHHHHT
T ss_pred ccHHHHHHHHhccHH-HHhhhhhhhc-ccCCCcchhhhhhhh--hhhh--hc--cCCeEEeCCCCcc-hHHHHHHHHHHh
Confidence 478889988745555 4566543332 334556666554333 2221 11 2235789999999 899999999999
Q ss_pred CCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhH-HHHhhcccccCcHHHHhhccCCc-eeEEEEEE
Q 016211 176 GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELIKNSILCNREEFLKVLNLAS-IDVVSVKL 252 (393)
Q Consensus 176 G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~-~~Ll~~~~~~~~~~~~~~~~~~~-~~~~~v~l 252 (393)
|++|++|++|++|+.++ +++++|++ +|+++.||+||+++++..+ ..|++..+.+ ......+++.++ .+.+++++
T Consensus 235 Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~-~~~~~~~~~~~~~~s~~~~~~ 311 (501)
T 4dgk_A 235 GGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA-VKQSNKLQTKRMSNSLFVLYF 311 (501)
T ss_dssp TCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC----------------------------CCEEEEEEE
T ss_pred CCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc-hhhhhhhhccccCCceeEEEe
Confidence 99999999999999998 67888988 6899999999999888765 5677765321 222345555554 35778899
Q ss_pred EeccCCCCCCCCcceeecCC-----------Cc---ccc-ceehhhhcccccCCCCcEEEE-EeecCCCCCCC----CHH
Q 016211 253 WFDKKVTVPNVSNACSGFGD-----------SL---AWT-FFDLNKIYDEHKDDSATVIQA-DFYHANELMPL----KDD 312 (393)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~-----------~~---~~~-~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~----~~~ 312 (393)
+++.+......++.+++.+. .. ..+ +...+..++..++++.+.+.+ +..+...+.+. .++
T Consensus 312 ~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~ 391 (501)
T 4dgk_A 312 GLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVEGP 391 (501)
T ss_dssp EESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHHHHH
T ss_pred cccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHHHHH
Confidence 99887652222233332210 00 000 111233344555555555433 22332222222 256
Q ss_pred HHHHHHHHHHhhh-hcCCCCCceeeeEEee----------cCCCccccCCCC---cCCCCCC-CCCCCceEEecccccc-
Q 016211 313 QVVAKAVSYLSKC-IKDFSTATVMDHKIRR----------FPKSLTHFFPGS---YKYMMRG-FTSFPNLFMAGDWITT- 376 (393)
Q Consensus 313 e~~~~~~~~l~~~-~p~~~~~~~~~~~~~~----------~~~a~~~~~~g~---~~~~~~~-~~~~~~L~laGd~~~~- 376 (393)
++.+++++.|++. +|++++ .++...+.. +.++.+...+.. ...||.. .|+++|||+||++|++
T Consensus 392 ~~~~~vl~~l~~~~~P~~~~-~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG 470 (501)
T 4dgk_A 392 KLRDRIFAYLEQHYMPGLRS-QLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPG 470 (501)
T ss_dssp HHHHHHHHHHHHHTCTTHHH-HEEEEEEECTTTTC------------------------------CCTTEEECCCH----
T ss_pred HHHHHHHHHHHHhhCCChHH-ceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCCCc
Confidence 7788899999875 599864 666555431 122333333321 2246654 3789999999999987
Q ss_pred --CCCc-cccchhcc
Q 016211 377 --RHGS-WSQVTFKL 388 (393)
Q Consensus 377 --~~ga-~s~~~a~~ 388 (393)
++|| .||..||+
T Consensus 471 ~Gv~ga~~SG~~aA~ 485 (501)
T 4dgk_A 471 AGIPGVIGSAKATAG 485 (501)
T ss_dssp --HHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH
Confidence 4566 68998875
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.84 E-value=5.7e-21 Score=183.95 Aligned_cols=284 Identities=12% Similarity=0.093 Sum_probs=176.7
Q ss_pred ccCccHHH--HHHHcCC--CHHHHHHHHHHHHH-hhcCCCcccccHHHHHHHHHHHHhhccCCcceEEecCCchhHhHHH
Q 016211 93 YDSITARE--LFKQFGC--SERLYRNVIGPLVQ-VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEP 167 (393)
Q Consensus 93 ~d~~s~~~--~l~~~~~--~~~~~~~~~~p~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~l~~~ 167 (393)
.+++|+.+ |+.+... .....+.++++++. ..++.+++..|+..+... ..+ ........+.+++||++. +++.
T Consensus 135 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~-~~~~~~~~~~~~~gG~~~-l~~~ 211 (472)
T 1b37_A 135 RDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATF-SDFGDDVYFVADQRGYEA-VVYY 211 (472)
T ss_dssp TTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHH-HHHCSEEEEECCTTCTTH-HHHH
T ss_pred chhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-ccc-cccCCceeeeecCCcHHH-HHHH
Confidence 46778765 6665421 12224566777663 345667777775432211 111 011111122334799998 7888
Q ss_pred HHHHHHHc--------CCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHHhh--cccccCcHHH
Q 016211 168 WMDSMRTR--------GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIK--NSILCNREEF 236 (393)
Q Consensus 168 l~~~l~~~--------G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~Ll~--~~~~~~~~~~ 236 (393)
|++.+.+. |++|++|++|++|..++ +++. |++ +|++++||+||+|+|+..+.+++. .++++ ....
T Consensus 212 l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~ 287 (472)
T 1b37_A 212 LAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP--GGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKV 287 (472)
T ss_dssp HHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS--SCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHH
T ss_pred HHHhccccccccccccccEEEcCCEEEEEEEcC--CcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHH
Confidence 98887654 67999999999999887 4465 666 577899999999999999987643 22221 2234
Q ss_pred HhhccCCceeEEEEEEEeccCCCCCCCCcceeec-CC--CccccceehhhhcccccCCCCcEEEEEeec--CCCCCCCCH
Q 016211 237 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGF-GD--SLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKD 311 (393)
Q Consensus 237 ~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~ 311 (393)
+.++++.+.++.++++.|++++|.......++.. +. .... ++.. ..+. . ++++++.+.+.. +..|..+++
T Consensus 288 ~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~-p~~~~l~~~~~~~~a~~~~~~~~ 362 (472)
T 1b37_A 288 RAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYG-VWQE--FEKQ-Y-PDANVLLVTVTDEESRRIEQQSD 362 (472)
T ss_dssp HHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSC-EEEE--CTTT-S-TTCCEEEEEEEHHHHHHHHTSCH
T ss_pred HHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccce-eeec--ccCC-C-CCCCEEEEEechHHHHHHHhCCH
Confidence 5678888888899999999998842111111111 11 1111 2211 1111 1 344544433332 234556789
Q ss_pred HHHHHHHHHHHhhhhcCCCCCceeeeEEeec------CCCccccCCCCcC-CCCCCCCCCCceEEecccccc-----CCC
Q 016211 312 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRF------PKSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITT-----RHG 379 (393)
Q Consensus 312 ~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~------~~a~~~~~~g~~~-~~~~~~~~~~~L~laGd~~~~-----~~g 379 (393)
+++++.++++|++++|+....+++...+.+| .+++..+.||+.. .++..++|++||||||+++++ ++|
T Consensus 363 ~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~G 442 (472)
T 1b37_A 363 EQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHG 442 (472)
T ss_dssp HHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhH
Confidence 9999999999999998753225556666777 3344445567542 234456889999999999985 457
Q ss_pred c-cccchhcc
Q 016211 380 S-WSQVTFKL 388 (393)
Q Consensus 380 a-~s~~~a~~ 388 (393)
| .||++||.
T Consensus 443 A~~SG~~aA~ 452 (472)
T 1b37_A 443 AYLSGIDSAE 452 (472)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7 69999884
No 15
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.83 E-value=5.7e-20 Score=169.54 Aligned_cols=221 Identities=11% Similarity=0.087 Sum_probs=151.9
Q ss_pred EEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHHhhccc--c
Q 016211 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSI--L 230 (393)
Q Consensus 154 ~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~Ll~~~~--~ 230 (393)
....+|++. +.+.+.+.+ |++|+++++|++|..+++ ++. |++ +|+++.||+||+|+|++.+.+|+++.. +
T Consensus 105 ~~~~~g~~~-l~~~l~~~~---g~~i~~~~~V~~i~~~~~--~~~-v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 105 FVAPQGISS-IIKHYLKES---GAEVYFRHRVTQINLRDD--KWE-VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EECTTCTTH-HHHHHHHHH---TCEEESSCCEEEEEECSS--SEE-EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred eecCCCHHH-HHHHHHHhc---CCEEEeCCEEEEEEEcCC--EEE-EEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 334688888 777777654 899999999999998773 465 666 577789999999999999999987521 1
Q ss_pred cCcHHHHhhccCCceeEEEEEEEeccCCCCCCCCcceeecCCC-ccccceehhhhcccccCCCCcEEEEEee--cCCCCC
Q 016211 231 CNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDS-LAWTFFDLNKIYDEHKDDSATVIQADFY--HANELM 307 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 307 (393)
.....+.+.++.|.++.+|++.|+++++.+.+..+++..+.. +.+++++.++. ....++++.++.+..+ .++++.
T Consensus 178 -~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~-~r~~~~~~~~~v~~~~~~~~~~~~ 255 (342)
T 3qj4_A 178 -SECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKR-NIESSEIGPSLVIHTTVPFGVTYL 255 (342)
T ss_dssp -CHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHT-TCCCC-CCCEEEEEECHHHHHHTT
T ss_pred -CHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCC-CCCCCCCCceEEEECCHHHHHHhh
Confidence 123346788999999999999999875533333333222223 44444444442 1111123333322222 234567
Q ss_pred CCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCCCCCCC--CCCCceEEecccccc--CCCc-cc
Q 016211 308 PLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITT--RHGS-WS 382 (393)
Q Consensus 308 ~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~--~~~~~L~laGd~~~~--~~ga-~s 382 (393)
+++++++++.++++|++++|... +++++.++||++++|.+... .++... ...+||++||||+.. .+|| .|
T Consensus 256 ~~~~~~~~~~~~~~l~~~~g~~~--~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g~~v~~ai~s 330 (342)
T 3qj4_A 256 EHSIEDVQELVFQQLENILPGLP--QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQSNFDGCITS 330 (342)
T ss_dssp TSCHHHHHHHHHHHHHHHSCSCC--CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSCSSHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccCCC--CCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCCCCccHHHHH
Confidence 78999999999999999998553 67888999999999876431 122222 356899999999985 7788 79
Q ss_pred cchhcc
Q 016211 383 QVTFKL 388 (393)
Q Consensus 383 ~~~a~~ 388 (393)
|.+||+
T Consensus 331 g~~aa~ 336 (342)
T 3qj4_A 331 ALCVLE 336 (342)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998874
No 16
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.78 E-value=1.3e-17 Score=158.70 Aligned_cols=266 Identities=13% Similarity=0.098 Sum_probs=172.6
Q ss_pred hcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH---hh-ccCCcceEEecCCchhHhHH
Q 016211 91 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LA-HQKNFDLVWCRGTLREKIFE 166 (393)
Q Consensus 91 ~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~---~~-~~~~~~~~~~~gG~~~~l~~ 166 (393)
..+| +|+.+|+++.+.++.. ..++.+++...++.+++++|+..++..+.... .. -.. ... .+.+|++. +.+
T Consensus 137 ~~~d-~s~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~-l~~ 211 (431)
T 3k7m_X 137 EDLD-IPLNEYVDKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLS-LDE-VFSNGSAD-LVD 211 (431)
T ss_dssp GGGC-SBHHHHHHHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHT-CCE-EETTCTHH-HHH
T ss_pred hhhc-CCHHHHHHhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecc-hhh-hcCCcHHH-HHH
Confidence 3456 9999999998777664 56788889999999999999998876665420 00 000 111 56788877 544
Q ss_pred HHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCCce
Q 016211 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 245 (393)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 245 (393)
.+. ++.| +|++|++|++|..+++ ++. |++ +|++++||+||+|+|++.++.+...+.++ ....+.+..+.+.
T Consensus 212 ~~~---~~~g-~i~~~~~V~~i~~~~~--~v~-v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~~~ 283 (431)
T 3k7m_X 212 AMS---QEIP-EIRLQTVVTGIDQSGD--VVN-VTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGHGG 283 (431)
T ss_dssp HHH---TTCS-CEESSCCEEEEECSSS--SEE-EEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCCCC
T ss_pred HHH---hhCC-ceEeCCEEEEEEEcCC--eEE-EEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCCCc
Confidence 443 3446 9999999999998773 465 666 57779999999999999988775333331 2223456666677
Q ss_pred eEEEEEEEeccCCCCCCCCcceeecCCCccccceehhhhcccccCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHHhhh
Q 016211 246 DVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKC 325 (393)
Q Consensus 246 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~ 325 (393)
..++|.+.|+++++ + +++.+.......++..... .++.++.. +...+.+.. .+++ .+.+.|+++
T Consensus 284 ~~~kv~~~~~~~~~-----~-i~~~~d~~~~~~~~~~~~~-----~~~~~l~~-~~~g~~~~~-~~~~---~~~~~l~~~ 347 (431)
T 3k7m_X 284 QGLKILIHVRGAEA-----G-IECVGDGIFPTLYDYCEVS-----ESERLLVA-FTDSGSFDP-TDIG---AVKDAVLYY 347 (431)
T ss_dssp CEEEEEEEEESCCT-----T-EEEEBSSSSSEEEEEEECS-----SSEEEEEE-EEETTTCCT-TCHH---HHHHHHHHH
T ss_pred ceEEEEEEECCCCc-----C-ceEcCCCCEEEEEeCcCCC-----CCCeEEEE-EeccccCCC-CCHH---HHHHHHHHh
Confidence 77899999988764 1 3333322223344432110 12333322 322222322 2332 456778888
Q ss_pred hcCCCCCceeeeEEeecC------CCccccCCCCc-CCCCCCCCCCCceEEecccccc-----CCCc-cccchhcc
Q 016211 326 IKDFSTATVMDHKIRRFP------KSLTHFFPGSY-KYMMRGFTSFPNLFMAGDWITT-----RHGS-WSQVTFKL 388 (393)
Q Consensus 326 ~p~~~~~~~~~~~~~~~~------~a~~~~~~g~~-~~~~~~~~~~~~L~laGd~~~~-----~~ga-~s~~~a~~ 388 (393)
+|.+ .++....++|. ++...+.||.. ..++..++|+++|||||++|+. +||| .||+|||+
T Consensus 348 ~~~~---~~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~ 420 (431)
T 3k7m_X 348 LPEV---EVLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVN 420 (431)
T ss_dssp CTTC---EEEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHH
T ss_pred cCCC---CccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHH
Confidence 8865 36666667775 23333557753 3456667889999999988874 7788 79999985
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.75 E-value=8.6e-18 Score=162.93 Aligned_cols=277 Identities=13% Similarity=0.063 Sum_probs=164.8
Q ss_pred hcccCccHHHHHHHcC-CCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhccCCcceEEecCCchhHhHHHHH
Q 016211 91 RKYDSITARELFKQFG-CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 169 (393)
Q Consensus 91 ~~~d~~s~~~~l~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~l~~~l~ 169 (393)
..++++|+.+|+++.+ +++..++.+.. ++.... ....+....+.....+ . ......+++||++. ++++|+
T Consensus 178 ~~~~~~s~~~~l~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~--~--~~~~~~~~~gG~~~-l~~~l~ 248 (498)
T 2iid_A 178 NKYDTYSTKEYLIKEGDLSPGAVDMIGD-LLNEDS---GYYVSFIESLKHDDIF--A--YEKRFDEIVDGMDK-LPTAMY 248 (498)
T ss_dssp HHHTTSBHHHHHHHTSCCCHHHHHHHHH-HTTCGG---GTTSBHHHHHHHHHHH--T--TCCCEEEETTCTTH-HHHHHH
T ss_pred HHhhhhhHHHHHHHccCCCHHHHHHHHH-hcCccc---chhHHHHHHHHHHhcc--c--cCcceEEeCCcHHH-HHHHHH
Confidence 3468899999999865 56766543322 211100 0111221111111111 1 22345678899998 888998
Q ss_pred HHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCe----EEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCCc
Q 016211 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE----TYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 244 (393)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~----~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 244 (393)
+.+.+ +|++|++|++|..++ +++. |++ +|+ +++||+||+|+|+..+..|...++++ ....+.++++.+
T Consensus 249 ~~l~~---~i~~~~~V~~I~~~~--~~v~-v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~ 321 (498)
T 2iid_A 249 RDIQD---KVHFNAQVIKIQQND--QKVT-VVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHY 321 (498)
T ss_dssp HHTGG---GEESSCEEEEEEECS--SCEE-EEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCE
T ss_pred Hhccc---ccccCCEEEEEEECC--CeEE-EEEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCC
Confidence 87753 899999999999887 3464 555 443 58999999999999887765433331 233456788999
Q ss_pred eeEEEEEEEeccCCCCCCC-CcceeecCCCccccceehhhhcccccCCCCcEEEEEee--cCCCCCCCCHHHHHHHHHHH
Q 016211 245 IDVVSVKLWFDKKVTVPNV-SNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSY 321 (393)
Q Consensus 245 ~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~e~~~~~~~~ 321 (393)
.++.+|++.|++++|.... .+.....+.+...+++. +.. .+.+..++..... .+..+..++++++++.++++
T Consensus 322 ~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s~~----~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~ 396 (498)
T 2iid_A 322 RSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-NHN----FTNGVGVIIAYGIGDDANFFQALDFKDCADIVFND 396 (498)
T ss_dssp ECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECC-SSC----CTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHH
T ss_pred cceeEEEEEeCCCCccCCCccCCcccCCCCcceEEEC-CCC----CCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHH
Confidence 9999999999999883211 01111112222222232 111 1123344433222 23457778999999999999
Q ss_pred HhhhhcCCCC---CceeeeEEeecCCC------ccccCCCCcC-CCCCCCCCCCceEEecccccc----CCCc-cccchh
Q 016211 322 LSKCIKDFST---ATVMDHKIRRFPKS------LTHFFPGSYK-YMMRGFTSFPNLFMAGDWITT----RHGS-WSQVTF 386 (393)
Q Consensus 322 l~~~~p~~~~---~~~~~~~~~~~~~a------~~~~~~g~~~-~~~~~~~~~~~L~laGd~~~~----~~ga-~s~~~a 386 (393)
|+++++...+ .......+.+|... ...+.|+... +.+...++.+||||||++++. ++|| .||+||
T Consensus 397 L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~g~~~GAi~SG~ra 476 (498)
T 2iid_A 397 LSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRA 476 (498)
T ss_dssp HHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHH
T ss_pred HHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCCcCHHHHHHHHHHH
Confidence 9999973211 01223456677641 1112333221 122334678999999999964 3567 699998
Q ss_pred cc
Q 016211 387 KL 388 (393)
Q Consensus 387 ~~ 388 (393)
|.
T Consensus 477 A~ 478 (498)
T 2iid_A 477 AR 478 (498)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 18
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.75 E-value=2.2e-18 Score=166.70 Aligned_cols=224 Identities=13% Similarity=0.153 Sum_probs=146.7
Q ss_pred cceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC---eEEecCEEEEecChhhHHHHhh
Q 016211 151 FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGISTLQELIK 226 (393)
Q Consensus 151 ~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g---~~~~ad~VI~a~p~~~~~~Ll~ 226 (393)
....+++||++. ++++|++.+.+ ++|++|++|++|..++ +++. |++ +| ++++||+||+|+|+..+..|..
T Consensus 229 ~~~~~~~gG~~~-l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~ 302 (489)
T 2jae_A 229 MMMFTPVGGMDR-IYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQN 302 (489)
T ss_dssp SSEEEETTCTTH-HHHHHHHHHCG--GGEETTCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEE
T ss_pred ccEEeecCCHHH-HHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCcc
Confidence 356778999998 88999887742 7899999999999887 4565 554 45 6799999999999999888765
Q ss_pred cccccCcHHHHhhccCCceeEEEEEEEeccCCCCCC-C-CcceeecCCCccccceehhhhcccccCCCCcEEEEEee--c
Q 016211 227 NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-V-SNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--H 302 (393)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~ 302 (393)
+.+ ....+.++++.+.++.++++.|++++|... . .+.+...+.++..+.++ +...+ .+.+.++.+... .
T Consensus 303 ~l~---~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~-s~~~~---~~~~~l~~~~~~g~~ 375 (489)
T 2jae_A 303 NLP---GDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFP-YDHYN---SDRGVVVAYYSSGKR 375 (489)
T ss_dssp CCC---HHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECC-SSSTT---SSCEEEEEEEEETHH
T ss_pred CCC---HHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeC-CCCCC---CCCCEEEEEeeCCch
Confidence 221 233456788888899999999999876321 1 10111112233232222 21111 123444433222 2
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhhcC-CCCCceeeeEEeecCCCcc------ccC------CCCcC-CCCCCCCCCCceE
Q 016211 303 ANELMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKSLT------HFF------PGSYK-YMMRGFTSFPNLF 368 (393)
Q Consensus 303 ~~~~~~~~~~e~~~~~~~~l~~~~p~-~~~~~~~~~~~~~~~~a~~------~~~------~g~~~-~~~~~~~~~~~L~ 368 (393)
+..|..++++++++.++++|++++|. +.. ++....+.+|....+ .+. ||... .++..+++.+|||
T Consensus 376 ~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~-~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 454 (489)
T 2jae_A 376 QEAFESLTHRQRLAKAIAEGSEIHGEKYTR-DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIY 454 (489)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHCGGGGS-SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHcCcchhh-hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEE
Confidence 34566788999999999999999987 543 566666777864322 121 33211 1223346789999
Q ss_pred Eecccccc----CCCc-cccchhcc
Q 016211 369 MAGDWITT----RHGS-WSQVTFKL 388 (393)
Q Consensus 369 laGd~~~~----~~ga-~s~~~a~~ 388 (393)
|||++++. .+|| .||++||+
T Consensus 455 faG~~~~~~~~~v~gAi~sg~~aA~ 479 (489)
T 2jae_A 455 FAGDHLSNAIAWQHGALTSARDVVT 479 (489)
T ss_dssp ECSGGGBSSTTSHHHHHHHHHHHHH
T ss_pred EeEHHhccCccHHHHHHHHHHHHHH
Confidence 99999852 5677 69999874
No 19
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.73 E-value=8.4e-17 Score=152.34 Aligned_cols=204 Identities=14% Similarity=0.183 Sum_probs=145.7
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCccc-ceeec-c---------CCceeccccccCCCCCCCCcceeccccCCCCCHhhh
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWMK-SAQYS-E---------EGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDR 70 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~~-~~~~~-~---------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k 70 (393)
|.++.++.++.++|.++|+...+.|.. ...|. . +|+. .+.|.+...+++.+.+++.||
T Consensus 93 P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~-----------~~VPss~~e~~~~~lLs~~eK 161 (475)
T 3p1w_A 93 PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFI-----------HKVPATDMEALVSPLLSLMEK 161 (475)
T ss_dssp CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEE-----------EECCCSHHHHHTCTTSCHHHH
T ss_pred CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCce-----------EeCCCCHHHHhhccCCCHHHH
Confidence 567789999999999999998888875 33332 1 2221 223556555778899999999
Q ss_pred hcchhHHHHHhhcCCC-chhhh--cccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH--h
Q 016211 71 LTSLPLMAAVIDFDNT-DVAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--L 145 (393)
Q Consensus 71 ~~~~~~~~~~~~~~~~-~~~~~--~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~--~ 145 (393)
.++.+++..+.++... ...+. +++++|+.+|++++++++.+.+.++.++.... ..+..+.|+...+..+..+. +
T Consensus 162 ~~l~kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~~y~~Sl 240 (475)
T 3p1w_A 162 NRCKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIKLYMQSI 240 (475)
T ss_dssp HHHHHHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHHHHHHHH
Confidence 9988877766665322 22232 24689999999999999998765544443222 22344567776665554442 1
Q ss_pred hccCCcceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 146 AHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 146 ~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
...+++.+.||+||+++ +++++++.+++.|++|+++++|++|..+++ |++++|++ +|+++.||+||++.+..
T Consensus 241 ~~yg~s~~~yp~gG~~~-L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 241 SAFGKSPFIYPLYGLGG-IPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHSSCSEEEETTCTTH-HHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred hhcCCCceEEECCCHHH-HHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECCCcc
Confidence 22345678999999998 899999999999999999999999998333 57888988 47889999999998654
No 20
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.72 E-value=3.5e-17 Score=163.27 Aligned_cols=216 Identities=17% Similarity=0.166 Sum_probs=141.9
Q ss_pred eEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C------CeEEecCEEEEecChhhHHHHh
Q 016211 153 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI 225 (393)
Q Consensus 153 ~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~------g~~~~ad~VI~a~p~~~~~~Ll 225 (393)
...++||++. |+++|++ +.+|++|++|++|..+++ .+. |++ + |++++||+||+|+|+.+++++.
T Consensus 393 ~~~~~gG~~~-l~~~La~-----~l~I~l~~~V~~I~~~~~--~v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 393 HLTVRNGYSC-VPVALAE-----GLDIKLNTAVRQVRYTAS--GCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CEEETTCTTH-HHHHHTT-----TCEEETTEEEEEEEEETT--EEE-EEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred eeeecCcHHH-HHHHHHh-----cCceecCCeEEEEEECCC--cEE-EEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 4567899998 6676653 568999999999999874 464 544 3 4689999999999999998742
Q ss_pred ----hcccccCcHHHHhhccCCceeEEEEEEEeccCCCCCCCCcceeecCC------CccccceehhhhcccccCCCCcE
Q 016211 226 ----KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATV 295 (393)
Q Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l 295 (393)
-.++++ ....+.++++.+.++.+|+|.|++++|.. ..+ .++.-. +...++|+.+ ..+.+
T Consensus 464 ~~i~f~P~LP-~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~-~~~-~~G~l~~~~~~~~~~~~~~~~~--------~~~vL 532 (662)
T 2z3y_A 464 PAVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY--------KAPIL 532 (662)
T ss_dssp CSSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCS-EEEECCSSSTTTTEEEEEECCS--------SSSEE
T ss_pred CceEEcCCCC-HHHHHHHHhCCccceeEEEEEcCcccccC-CCC-ceeeecCCCCCCCceeEEEeCC--------CCCEE
Confidence 122221 22235678888989999999999999842 212 333211 1112223211 12334
Q ss_pred EEEEee-cCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCC------ccccCCCCcCC------CC----
Q 016211 296 IQADFY-HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------MM---- 358 (393)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a------~~~~~~g~~~~------~~---- 358 (393)
++++.. .+..+..++++++++.++++|+++|+.....++....+++|... +..+.||.... .|
T Consensus 533 ~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~ 612 (662)
T 2z3y_A 533 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 612 (662)
T ss_dssp EEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC-
T ss_pred EEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccc
Confidence 332222 23456678999999999999999997643236777778888743 22345664210 11
Q ss_pred ----CCCCCCCceEEecccccc-----CCCc-cccchhcc
Q 016211 359 ----RGFTSFPNLFMAGDWITT-----RHGS-WSQVTFKL 388 (393)
Q Consensus 359 ----~~~~~~~~L~laGd~~~~-----~~ga-~s~~~a~~ 388 (393)
...++.++|||||++|+. +||| .||+|||.
T Consensus 613 ~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~ 652 (662)
T 2z3y_A 613 PSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAG 652 (662)
T ss_dssp --------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHH
T ss_pred cccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHH
Confidence 123456899999999984 6788 79999985
No 21
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.71 E-value=6.3e-17 Score=163.75 Aligned_cols=216 Identities=17% Similarity=0.170 Sum_probs=143.8
Q ss_pred eEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C------CeEEecCEEEEecChhhHHHHh
Q 016211 153 LVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI 225 (393)
Q Consensus 153 ~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~------g~~~~ad~VI~a~p~~~~~~Ll 225 (393)
...++||++. |+++|++ +.+|++|++|++|..+++ +|. |++ + |++++||+||+|+|+.++++++
T Consensus 564 ~~~~~gG~~~-L~~aLa~-----~l~I~Lnt~V~~I~~~~~--gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~ 634 (852)
T 2xag_A 564 HLTVRNGYSC-VPVALAE-----GLDIKLNTAVRQVRYTAS--GCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 634 (852)
T ss_dssp CEEETTCTTH-HHHHHTT-----TCCEECSEEEEEEEEETT--EEE-EEEEESSSTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred eEEecCcHHH-HHHHHHh-----CCCEEeCCeEEEEEEcCC--cEE-EEEeecccCCCCeEEECCEEEECCCHHHHHhhh
Confidence 4567899998 6676653 458999999999999874 464 544 3 4689999999999999998742
Q ss_pred h----cccccCcHHHHhhccCCceeEEEEEEEeccCCCCCCCCcceeecCC------CccccceehhhhcccccCCCCcE
Q 016211 226 K----NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATV 295 (393)
Q Consensus 226 ~----~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l 295 (393)
. .++++ ....+.++++.+.++.+|+|.|++++|.. ..+ .++... +...++|+.+ ..+.|
T Consensus 635 ~~I~F~P~LP-~~k~~AI~~l~~g~v~KV~L~F~~~fW~~-~~~-~fG~l~~~~~~~~~l~~~~~~~--------~~pvL 703 (852)
T 2xag_A 635 PAVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY--------KAPIL 703 (852)
T ss_dssp CSSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCC-EEEECCSSSTTTTTTCEEEECS--------SSSEE
T ss_pred cccccCCCCC-HHHHHHHHcCCccceEEEEEEcCCcccCC-CCC-eeeeeccccCCCCceEEEecCC--------CCCEE
Confidence 1 22221 22234678888889999999999999842 112 333211 1122233321 12334
Q ss_pred EEEEee-cCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCC------ccccCCCCcCC------C-----
Q 016211 296 IQADFY-HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------M----- 357 (393)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a------~~~~~~g~~~~------~----- 357 (393)
++++.. .+..+..++++++++.++++|.++|+.....++....+++|... +..+.||.... .
T Consensus 704 l~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~ 783 (852)
T 2xag_A 704 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 783 (852)
T ss_dssp EEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCC
T ss_pred EEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccc
Confidence 332222 23456678999999999999999997643236777788888742 33345664210 1
Q ss_pred ---CCCCCCCCceEEecccccc-----CCCc-cccchhcc
Q 016211 358 ---MRGFTSFPNLFMAGDWITT-----RHGS-WSQVTFKL 388 (393)
Q Consensus 358 ---~~~~~~~~~L~laGd~~~~-----~~ga-~s~~~a~~ 388 (393)
|...++.++|||||++|+. +||| +||+|||.
T Consensus 784 ~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~ 823 (852)
T 2xag_A 784 PSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAG 823 (852)
T ss_dssp CSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHH
T ss_pred cccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHH
Confidence 1224556899999999984 6788 79999984
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.71 E-value=6.3e-17 Score=153.59 Aligned_cols=270 Identities=13% Similarity=0.132 Sum_probs=156.1
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHH-HhhccCCcceEEecCCchhHhHHHHHHH
Q 016211 93 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-ILAHQKNFDLVWCRGTLREKIFEPWMDS 171 (393)
Q Consensus 93 ~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~~~gG~~~~l~~~l~~~ 171 (393)
.+.+|+.+|+++++.+ .+.+.+..|++...++ +++++|+.+++..+... +.....+ ....+.||+++ +++++.+.
T Consensus 140 ~~~~s~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-l~~~l~~~ 215 (424)
T 2b9w_A 140 DLMLPFDEFLALNGCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKG-DLWTWADGTQA-MFEHLNAT 215 (424)
T ss_dssp GGGSBHHHHHHHTTCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHT-CCBCCTTCHHH-HHHHHHHH
T ss_pred hhccCHHHHHHhhCcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCC-ceEEeCChHHH-HHHHHHHh
Confidence 3579999999998665 4667777888877765 67889998775444321 0010111 12456799988 77877755
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCCceeEEEEE
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVK 251 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~v~ 251 (393)
+ +.+|++|++|++|..++ +++. |++++++++||+||+|+|+..+.++++.. +++.+.+.++.+.++. +.
T Consensus 216 l---~~~v~~~~~V~~i~~~~--~~v~-v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~~ 284 (424)
T 2b9w_A 216 L---EHPAERNVDITRITRED--GKVH-IHTTDWDRESDVLVLTVPLEKFLDYSDAD----DDEREYFSKIIHQQYM-VD 284 (424)
T ss_dssp S---SSCCBCSCCEEEEECCT--TCEE-EEESSCEEEESEEEECSCHHHHTTSBCCC----HHHHHHHTTCEEEEEE-EE
T ss_pred h---cceEEcCCEEEEEEEEC--CEEE-EEECCCeEEcCEEEECCCHHHHhhccCCC----HHHHHHHhcCCcceeE-EE
Confidence 4 56899999999999876 4465 77754458999999999999887666532 2222344666665533 23
Q ss_pred EEeccCCCCCCCCcceeecC--C-CccccceehhhhcccccCCCCcEEEEEeecCCCCCCCCHHHHHHHHHHHHhhhhcC
Q 016211 252 LWFDKKVTVPNVSNACSGFG--D-SLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKD 328 (393)
Q Consensus 252 l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~p~ 328 (393)
+.+....+. ...+++.+ . ...+.+++.....+ ++...++..+......+.+.+++++.+.++++|+++.+.
T Consensus 285 ~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~ 358 (424)
T 2b9w_A 285 ACLVKEYPT---ISGYVPDNMRPERLGHVMVYYHRWAD---DPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP 358 (424)
T ss_dssp EEEESSCCS---SEEECGGGGSGGGTTSCCEEEECCTT---CTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeccCCc---ccccccCCCCCcCCCcceEEeeecCC---CCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc
Confidence 334333321 11122111 0 11122332222211 112223333333344566678999999999999996543
Q ss_pred CCCCceeeeEEeecCC----CccccCCCCcCCCCCCCCCCCceEEecccccc--CCCc-cccchhcc
Q 016211 329 FSTATVMDHKIRRFPK----SLTHFFPGSYKYMMRGFTSFPNLFMAGDWITT--RHGS-WSQVTFKL 388 (393)
Q Consensus 329 ~~~~~~~~~~~~~~~~----a~~~~~~g~~~~~~~~~~~~~~L~laGd~~~~--~~ga-~s~~~a~~ 388 (393)
.. .++.. ..|.. +...+..|+... ....++.+||||||+|+.. .++| .||.+||+
T Consensus 359 ~~--~~~~~--~~w~~~p~~~~~~~~~G~~~~-~~~~~~~~~l~~aG~~~~~g~~e~a~~Sg~~aA~ 420 (424)
T 2b9w_A 359 VE--KIIEE--QTWYYFPHVSSEDYKAGWYEK-VEGMQGRRNTFYAGEIMSFGNFDEVCHYSKDLVT 420 (424)
T ss_dssp EE--EEEEE--EEEEEEEECCHHHHHTTHHHH-HHHTTTGGGEEECSGGGSCSSHHHHHHHHHHHHH
T ss_pred cc--ccccc--cceeeeeccCHHHHhccHHHH-HHHHhCCCCceEeccccccccHHHHHHHHHHHHH
Confidence 21 23221 12321 112233343221 1112356799999999975 3355 68888874
No 23
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.66 E-value=8.9e-17 Score=161.65 Aligned_cols=221 Identities=17% Similarity=0.166 Sum_probs=141.4
Q ss_pred ceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHH--hhcc
Q 016211 152 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQEL--IKNS 228 (393)
Q Consensus 152 ~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~L--l~~~ 228 (393)
......+|++. +.++++ .|++|++|++|++|..+++ ++. |++ +|+++.||+||+|+|+..+++. ...+
T Consensus 525 ~~~~~~~G~~~-l~~aLa-----~gl~I~l~t~V~~I~~~~~--~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P 595 (776)
T 4gut_A 525 DHTLLTPGYSV-IIEKLA-----EGLDIQLKSPVQCIDYSGD--EVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNP 595 (776)
T ss_dssp CEEECTTCTHH-HHHHHH-----TTSCEESSCCEEEEECSSS--SEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEES
T ss_pred CeEEECChHHH-HHHHHH-----hCCcEEcCCeeEEEEEcCC--EEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCC
Confidence 34566788877 555544 3779999999999998874 465 665 6778999999999999998752 1122
Q ss_pred cccCcHHHHhhccCCceeEEEEEEEeccCCCCCC-CCcceeecCC------CccccceehhhhcccccCCCCcEEEEEee
Q 016211 229 ILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATVIQADFY 301 (393)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (393)
+++ ....+.+..+.+.++.+|.+.|++++|... ....+++... ++..++++.+ + ..+..++...+.
T Consensus 596 ~Lp-~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~---p---~g~~~vL~~~i~ 668 (776)
T 4gut_A 596 PLS-EKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD---P---QKKHSVLMSVIA 668 (776)
T ss_dssp CCC-HHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC---T---TSCSCEEEEEEC
T ss_pred CCC-HHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCC---C---CCCceEEEEEec
Confidence 221 233356778888888999999999998421 0111333211 1112233322 1 012234433333
Q ss_pred c--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCC------ccccCCCCcC-CCCCCCCCC-CceEEec
Q 016211 302 H--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYK-YMMRGFTSF-PNLFMAG 371 (393)
Q Consensus 302 ~--~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a------~~~~~~g~~~-~~~~~~~~~-~~L~laG 371 (393)
+ +..+.+++++|+++.++++|+++|+.....+++...+.+|... ...+.||... ..+....|+ ++|||||
T Consensus 669 G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAG 748 (776)
T 4gut_A 669 GEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAG 748 (776)
T ss_dssp THHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECS
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEe
Confidence 2 3456678999999999999999998633235667777888632 1223344321 111222353 7899999
Q ss_pred ccccc-----CCCc-cccchhcc
Q 016211 372 DWITT-----RHGS-WSQVTFKL 388 (393)
Q Consensus 372 d~~~~-----~~ga-~s~~~a~~ 388 (393)
++|++ +||| .||+|||.
T Consensus 749 E~Ts~~~~gtveGAi~SG~RaA~ 771 (776)
T 4gut_A 749 EATNRHFPQTVTGAYLSGVREAS 771 (776)
T ss_dssp GGGCSSSCSSHHHHHHHHHHHHH
T ss_pred hhhcCCCCcCHHHHHHHHHHHHH
Confidence 99985 6788 79999985
No 24
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.65 E-value=4.2e-16 Score=151.58 Aligned_cols=151 Identities=12% Similarity=-0.009 Sum_probs=98.6
Q ss_pred ccCccHHHHHHHc------CCCHHHHHHHHHHHHH---hhcCCCcccccHHHHHHHHHHHHhhccCCcceEEecCCchhH
Q 016211 93 YDSITARELFKQF------GCSERLYRNVIGPLVQ---VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREK 163 (393)
Q Consensus 93 ~d~~s~~~~l~~~------~~~~~~~~~~~~p~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~ 163 (393)
.+++|+.+|++++ .+++.. ..++.+++. ..++.+++++|+.+++. . ......+++| ++.
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~~-------~--~~~~~~~~~g-~~~- 203 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTYF-------G--HQGRNAFALN-YDS- 203 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHCC-------C--CSSCCEEESC-HHH-
T ss_pred CCCCCHHHHHHHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHHh-------h--ccCcchhhhC-HHH-
Confidence 4679999988753 123322 233334332 23466778888765321 1 1122346667 776
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHHh-----------hccccc
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELI-----------KNSILC 231 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~Ll-----------~~~~~~ 231 (393)
++++|++.+. +++|++|++|++|..+++ +.+ .|++ +|++++||+||+|+|+..++..+ -.+++
T Consensus 204 l~~~l~~~l~--~~~i~~~~~V~~I~~~~~-~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~L- 278 (516)
T 1rsg_A 204 VVQRIAQSFP--QNWLKLSCEVKSITREPS-KNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPL- 278 (516)
T ss_dssp HHHHHHTTSC--GGGEETTCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCC-
T ss_pred HHHHHHHhCC--CCEEEECCEEEEEEEcCC-CeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCC-
Confidence 7777766553 368999999999998632 335 4666 57789999999999999987431 11122
Q ss_pred CcHHHHhhccCCceeEEEEEEEeccCCCC
Q 016211 232 NREEFLKVLNLASIDVVSVKLWFDKKVTV 260 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 260 (393)
.....+.++++.+.++.+|++.|++++|.
T Consensus 279 p~~~~~ai~~~~~~~~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 279 KPVIQDAFDKIHFGALGKVIFEFEECCWS 307 (516)
T ss_dssp CHHHHHHTTSSCCCCCEEEEEEESSCCSC
T ss_pred CHHHHHHHHhCCCCcceEEEEEeCCCCCC
Confidence 12334678899999999999999999984
No 25
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.59 E-value=2.3e-14 Score=139.63 Aligned_cols=222 Identities=12% Similarity=0.101 Sum_probs=148.2
Q ss_pred CCchHHHHHHHhCCCCCCCccc-ceee-ccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHHHHhhcC
Q 016211 7 PFRNIFSLVDELGIKPFTGWMK-SAQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (393)
Q Consensus 7 ~y~~~~~Ll~elG~~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~~~~~~~ 84 (393)
.-..+.+||.++|+...+.|.. ..+| ..+|+.+ .+ |.+...+++.+.+++.+|.++.+++....++.
T Consensus 235 ~~g~lv~LL~~sgV~~yLEFk~v~~~y~~~~G~~~---------~V--Pas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~ 303 (650)
T 1vg0_A 235 SRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVE---------QV--PCSRADVFNSKQLTMVEKRMLMKFLTFCVEYE 303 (650)
T ss_dssp SSSHHHHHHHHHTGGGGCCEEECCEEEEESSSSEE---------EC--CCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGG
T ss_pred CCcHHHHHHHHcCCcceeeEEEccceEEecCCCEe---------EC--CCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhc
Confidence 3455899999999998888764 2333 2556432 12 44555567789999999999888766655543
Q ss_pred CCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHH--hhccCCcceEEecCCchh
Q 016211 85 NTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRGTLRE 162 (393)
Q Consensus 85 ~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~gG~~~ 162 (393)
.....+..++.+|+.+|+++++.++.+++.+...+ ++... +..++...+..+..++ ....+...+.|++||+++
T Consensus 304 ~~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~~--~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~ 379 (650)
T 1vg0_A 304 EHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AMTSE--TTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGE 379 (650)
T ss_dssp GCHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC--C--CSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTH
T ss_pred cChHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH--hccCC--CCCchhHHHHHHHHHHHHHHhhccCceEEeCCchhH
Confidence 22334567789999999999988998765444322 33322 2234554443333322 122233468899999999
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHHHHhhcccccCcHHHHhhcc
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 241 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~ 241 (393)
|+++|++.+++.|++|+++++|++|..+++.|++++|++ +|+++.||+||++.. . ++... ..+
T Consensus 380 -L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~--~----lp~~~---------~~~ 443 (650)
T 1vg0_A 380 -LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS--Y----LSENT---------CSR 443 (650)
T ss_dssp -HHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG--G----BCTTT---------TTT
T ss_pred -HHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh--h----cCHhH---------hcc
Confidence 999999999999999999999999998763135888886 589999999999322 1 12110 112
Q ss_pred CCceeEEEEEEEeccCCC
Q 016211 242 LASIDVVSVKLWFDKKVT 259 (393)
Q Consensus 242 ~~~~~~~~v~l~~~~~~~ 259 (393)
..+..+..+.+.+++++.
T Consensus 444 ~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 444 VQYRQISRAVLITDGSVL 461 (650)
T ss_dssp CCCEEEEEEEEEESSCSS
T ss_pred ccccceEEEEEEecCCCC
Confidence 234556777788888765
No 26
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.49 E-value=4.3e-13 Score=122.89 Aligned_cols=209 Identities=13% Similarity=0.073 Sum_probs=136.5
Q ss_pred cCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEE-ecCEEEEecChhhHHHHhhcccccCcH
Q 016211 157 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETY-SAGAVVLAVGISTLQELIKNSILCNRE 234 (393)
Q Consensus 157 ~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~-~ad~VI~a~p~~~~~~Ll~~~~~~~~~ 234 (393)
..|+.. +.+.+. + |++|+++++|++|..+++ ++. |++ +|+.+ +||.||+|+|++.+.++++.. ++
T Consensus 106 ~~~~~~-l~~~l~----~-g~~i~~~~~v~~i~~~~~--~~~-v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~----~~ 172 (336)
T 1yvv_A 106 KPGMSA-ITRAMR----G-DMPVSFSCRITEVFRGEE--HWN-LLDAEGQNHGPFSHVIIATPAPQASTLLAAA----PK 172 (336)
T ss_dssp SSCTHH-HHHHHH----T-TCCEECSCCEEEEEECSS--CEE-EEETTSCEEEEESEEEECSCHHHHGGGGTTC----HH
T ss_pred CccHHH-HHHHHH----c-cCcEEecCEEEEEEEeCC--EEE-EEeCCCcCccccCEEEEcCCHHHHHHhhccC----HH
Confidence 467666 444443 3 889999999999998874 364 666 56655 489999999999988877542 22
Q ss_pred HHHhhccCCceeEEEEEEEeccCCCCCCCCcceeecCCCccccceehhhhcccccCCC-CcEEEEEee-cCCCCCCCCHH
Q 016211 235 EFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDS-ATVIQADFY-HANELMPLKDD 312 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~-~~~~~~~~~~~ 312 (393)
....+..+.|.+++++.+.++++.+.+. ..++..+.++ .++++.+.. +... +. ..++..... .+.++.+++++
T Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~l~~~~~~-p~~~-~~~~~~v~~~~~~~~~~~~~~~~~ 247 (336)
T 1yvv_A 173 LASVVAGVKMDPTWAVALAFETPLQTPM--QGCFVQDSPL-DWLARNRSK-PERD-DTLDTWILHATSQWSRQNLDASRE 247 (336)
T ss_dssp HHHHHTTCCEEEEEEEEEEESSCCSCCC--CEEEECSSSE-EEEEEGGGS-TTCC-CSSEEEEEEECHHHHHHTTTSCHH
T ss_pred HHHHHhhcCccceeEEEEEecCCCCCCC--CeEEeCCCce-eEEEecCcC-CCCC-CCCcEEEEEeCHHHHHHHHhCCHH
Confidence 2346778889999999999998876432 2233223343 335554432 2111 11 123221111 23456678999
Q ss_pred HHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEecccccc--CCCc-cccchhcc
Q 016211 313 QVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITT--RHGS-WSQVTFKL 388 (393)
Q Consensus 313 e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~L~laGd~~~~--~~ga-~s~~~a~~ 388 (393)
++.+.+++.+.++++... ..+....+.+|..+.+.+..+.... ..+.++|+|||||+++ .++| .||.++|+
T Consensus 248 ~~~~~l~~~l~~~lg~~~-~~p~~~~~~rw~~a~~~~~~~~~~~----~~~~~rl~laGDa~~g~gv~~a~~sg~~lA~ 321 (336)
T 1yvv_A 248 QVIEHLHGAFAELIDCTM-PAPVFSLAHRWLYARPAGAHEWGAL----SDADLGIYVCGDWCLSGRVEGAWLSGQEAAR 321 (336)
T ss_dssp HHHHHHHHHHHTTCSSCC-CCCSEEEEEEEEEEEESSCCCCSCE----EETTTTEEECCGGGTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC-CCCcEEEccccCccCCCCCCCCCee----ecCCCCEEEEecCCCCCCHHHHHHHHHHHHH
Confidence 999999999999997422 2345566788987776665443221 1345899999999986 6667 68887764
No 27
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.47 E-value=1.1e-12 Score=124.45 Aligned_cols=199 Identities=9% Similarity=0.097 Sum_probs=127.8
Q ss_pred CCchHHHHHHHhCCCCCCCcccc-eee-ccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHHHHhhcC
Q 016211 7 PFRNIFSLVDELGIKPFTGWMKS-AQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (393)
Q Consensus 7 ~y~~~~~Ll~elG~~~~~~~~~~-~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~~~~~~~ 84 (393)
....+.++++++|++..+.+... ..| ..+|+.+. + |.+....+.....++.+|.++.+++..+.++.
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~---------~--p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYK---------V--PSTETEALASNLMGMFEKRRFRKFLVFVANFD 153 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEE---------C--CCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCC
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEE---------C--CCCHHHHhhCcccChhhHHHHHHHHHHHHhhc
Confidence 34578999999999865555431 222 24565321 2 22221233445566667776666555444433
Q ss_pred CCch-h--hhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhh--ccCCcceEEecCC
Q 016211 85 NTDV-A--WRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA--HQKNFDLVWCRGT 159 (393)
Q Consensus 85 ~~~~-~--~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~~~~gG 159 (393)
...+ . ..+.+++|+.+|+++++.++.+.+ ++...+....+.++.+.++...+..+..+... ..+...+.+++||
T Consensus 154 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG 232 (433)
T 1d5t_A 154 ENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYG 232 (433)
T ss_dssp TTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTC
T ss_pred ccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcC
Confidence 2111 1 113578999999999888887654 44332222222345556655443333332211 1122346789999
Q ss_pred chhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 160 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 160 ~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+++ ++++|++.+++.|++|+++++|++|..++ +++.+|.++|+++.||+||+|+++..
T Consensus 233 ~~~-l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 233 LGE-LPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp TTH-HHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHH-HHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEECCCCCc
Confidence 988 89999999999999999999999999887 56877888999999999999999874
No 28
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.46 E-value=2.7e-14 Score=140.92 Aligned_cols=285 Identities=12% Similarity=0.009 Sum_probs=158.4
Q ss_pred hcccCccH---HHHHHHc-CCCHHHHHHHHHHHHHhhcC-CCcccccHHHHHHHHHHHHhhccCCcceEEecCCchhHhH
Q 016211 91 RKYDSITA---RELFKQF-GCSERLYRNVIGPLVQVGLF-APAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIF 165 (393)
Q Consensus 91 ~~~d~~s~---~~~l~~~-~~~~~~~~~~~~p~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~l~ 165 (393)
.++|++|+ .+|+++. .++ ..+ .++.-+..+..+ .+....|+..++... + . ..+.+...+.||++. |+
T Consensus 279 ~~~d~~S~~~~~~~L~~~~~~s-~~~-~~~~~~~~~~gg~~~~~~~S~le~L~~~--~--~-~~~~~~~~i~GG~~~-L~ 350 (721)
T 3ayj_A 279 VAFEKGTLPPVDGVLDVDESIS-YYV-ELFGRFGFGTGGFKPLYNISLVEMMRLI--L--W-DYSNEYTLPVTENVE-FI 350 (721)
T ss_dssp HHHHHTSSCCGGGTSCHHHHHH-HHH-HHHHHHCSSSSCCGGGTTBBHHHHHHHH--H--T-TTTCEECCSSSSTHH-HH
T ss_pred HhhcccchhHHHHHHHhccccH-HHH-HHHHHHhhccCCCCCccchhHHHHHHHH--h--c-CCccceeEECCcHHH-HH
Confidence 35677888 8888541 122 222 222222222222 334567777665544 1 1 223445667899998 88
Q ss_pred HHHHHHHHHcCCeEecCceee--eEEecCCCC-----eEEEE-Ee-CCe--EEecCEEEEecChhhHHHHh-----h---
Q 016211 166 EPWMDSMRTRGCEFLDGRRVT--DFIYDEERC-----CISDV-VC-GKE--TYSAGAVVLAVGISTLQELI-----K--- 226 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~--~I~~~~~~~-----~v~~v-~~-~g~--~~~ad~VI~a~p~~~~~~Ll-----~--- 226 (393)
++|.+.+.. |+.|+++++|+ +|.++++++ .|. | .. +|+ +++||+||+|+|+..+..++ .
T Consensus 351 ~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~-V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~ 428 (721)
T 3ayj_A 351 RNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQL-LSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAA 428 (721)
T ss_dssp HHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEE-EEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEE
T ss_pred HHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEE-EEEecCCceEEEEcCEEEECCCHHHHhhccccccccccc
Confidence 999988743 67899999999 999875421 254 5 33 465 78999999999999986422 1
Q ss_pred -------------------ccc-c-c------CcHHHHhhccCCceeEEEEEEEe-----ccCCCCCCCCc--ceeecCC
Q 016211 227 -------------------NSI-L-C------NREEFLKVLNLASIDVVSVKLWF-----DKKVTVPNVSN--ACSGFGD 272 (393)
Q Consensus 227 -------------------~~~-~-~------~~~~~~~~~~~~~~~~~~v~l~~-----~~~~~~~~~~~--~~~~~~~ 272 (393)
.++ + + +....+.++++.|.+..+|.+.| ++++|...... ...-.|.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~ 508 (721)
T 3ayj_A 429 SQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDS 508 (721)
T ss_dssp EEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETT
T ss_pred cccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCC
Confidence 111 1 1 02334578899999999999999 88988422000 0111232
Q ss_pred Cccccce-e-hhhhcccccCCCCcEEEEEeec---CCCC------CCCCHHH-------HHHHHHHHHh--hhhcCCCC-
Q 016211 273 SLAWTFF-D-LNKIYDEHKDDSATVIQADFYH---ANEL------MPLKDDQ-------VVAKAVSYLS--KCIKDFST- 331 (393)
Q Consensus 273 ~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~~~---~~~~------~~~~~~e-------~~~~~~~~l~--~~~p~~~~- 331 (393)
++..+++ - .+. ..+.+++..++.+.|.. +..+ ..+++++ +++.++++++ +++|+...
T Consensus 509 ~~r~~~~~p~p~~--~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~ 586 (721)
T 3ayj_A 509 GLAASYVVPSPIV--EDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNA 586 (721)
T ss_dssp TTEEEEEEECSCC------CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSC
T ss_pred CcceEEEeccCcc--cccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCcccccc
Confidence 3221111 0 000 00111233433333431 2233 3334444 4999999999 88886530
Q ss_pred ---------Cc--eeeeEEeecC-----CCccccCCCCc-------CCC--CCCCCCCCceEEeccccccCCC----c-c
Q 016211 332 ---------AT--VMDHKIRRFP-----KSLTHFFPGSY-------KYM--MRGFTSFPNLFMAGDWITTRHG----S-W 381 (393)
Q Consensus 332 ---------~~--~~~~~~~~~~-----~a~~~~~~g~~-------~~~--~~~~~~~~~L~laGd~~~~~~g----a-~ 381 (393)
.+ +.+...+.|. ++.-.+.||.. .+. .....+.++|||||++++..|| | .
T Consensus 587 ~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~~~GWieGAl~ 666 (721)
T 3ayj_A 587 QPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSHLGGWLEGAFM 666 (721)
T ss_dssp EECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSSCTTSHHHHHH
T ss_pred ccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhccCCceehHHHH
Confidence 01 1233445553 22223456651 121 1123456899999999987555 4 4
Q ss_pred ccchhc
Q 016211 382 SQVTFK 387 (393)
Q Consensus 382 s~~~a~ 387 (393)
|+.+|+
T Consensus 667 Sa~~Aa 672 (721)
T 3ayj_A 667 SALNAV 672 (721)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777776
No 29
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.42 E-value=3.8e-12 Score=121.48 Aligned_cols=196 Identities=11% Similarity=0.155 Sum_probs=123.2
Q ss_pred CCchHHHHHHHhCCCCCCCcccc-eee-ccCCceeccccccCCCCCCCCcceeccccCCCCCHhhhhcchhHHHHHhhcC
Q 016211 7 PFRNIFSLVDELGIKPFTGWMKS-AQY-SEEGLEVEFPIFQDLNQLPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFD 84 (393)
Q Consensus 7 ~y~~~~~Ll~elG~~~~~~~~~~-~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~k~~~~~~~~~~~~~~ 84 (393)
.+..+.++++++|++..+.+... ..| ..+|+.+. + |.+....+....+++.+|.++.+++..+.++.
T Consensus 93 ~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~---------~--p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 161 (453)
T 2bcg_G 93 ANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYK---------V--PANEIEAISSPLMGIFEKRRMKKFLEWISSYK 161 (453)
T ss_dssp TTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEE---------C--CSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCB
T ss_pred cCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEE---------C--CCChHHHHhhhccchhhHHHHHHHHHHHHHhc
Confidence 56789999999999866555431 222 24565321 2 23312234455667778776666555544433
Q ss_pred CCch-hhh--cccCccHHHHHHHcCCCHHHHHHHHHHHHHh----hcCCCcccccHHHHHHHHHHHHhhccCCcceEEec
Q 016211 85 NTDV-AWR--KYDSITARELFKQFGCSERLYRNVIGPLVQV----GLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCR 157 (393)
Q Consensus 85 ~~~~-~~~--~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (393)
...+ .+. ..+.+|+.+|+++++.++.+++ ++...+.. .+...+...++..+..++... .......+.+++
T Consensus 162 ~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~--~~~~~~~~~~p~ 238 (453)
T 2bcg_G 162 EDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMALWTNDDYLQQPARPSFERILLYCQSV--ARYGKSPYLYPM 238 (453)
T ss_dssp TTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHH--HHHSSCSEEEET
T ss_pred cCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHHhccCccccCCchHHHHHHHHHHHHHH--HhhcCCceEeeC
Confidence 2111 111 2468999999999888888654 43322110 011122222221111122111 111223456899
Q ss_pred CCchhHhHHHHHHHHHHcCCeEecCceeeeEEec--CCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 158 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 158 gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~--~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
||++. ++++|++.+++.|++|+++++|++|..+ + +++++|+++|+++.||+||+|++++
T Consensus 239 gG~~~-l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 239 YGLGE-LPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKAPLVIADPTYF 299 (453)
T ss_dssp TCTTH-HHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEECSCEEECGGGC
T ss_pred CCHHH-HHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEECCEEEECCCcc
Confidence 99998 8999999999999999999999999987 5 6677888899999999999999987
No 30
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.16 E-value=2.3e-11 Score=112.97 Aligned_cols=201 Identities=8% Similarity=0.019 Sum_probs=126.2
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCccc-ceeeccCCceeccccccCCCCCCCCcceec-cccCCCCCHhhhhcchhHHHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWMK-SAQYSEEGLEVEFPIFQDLNQLPTPLGTLF-YTQFSRLPLVDRLTSLPLMAA 79 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~-~~~~~~ls~~~k~~~~~~~~~ 79 (393)
|.|...++.++++++++|.... +.+ ..++ .+|+.+ ++|..++.+. ++.. .+++.....++ ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~g~l~---------~lP~~~~~~~~l~~~-~~~~~~~~~~l---~~ 148 (397)
T 3hdq_A 85 HIFHTNSKDVFEYLSRFTEWRP--YQHRVLAS-VDGQLL---------PIPINLDTVNRLYGL-NLTSFQVEEFF---AS 148 (397)
T ss_dssp CCCEESCHHHHHHHHTSCCEEE--CCCBEEEE-ETTEEE---------EESCCHHHHHHHHTC-CCCHHHHHHHH---HH
T ss_pred cccCCChHHHHHHHHHhhhccc--ccccceEE-ECCEEE---------EcCCChHHHHHhhcc-CCCHHHHHHHH---hh
Confidence 7777889999999999995321 112 2233 366542 1333222111 2221 23433322211 11
Q ss_pred HhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhcc-CCcce-EEec
Q 016211 80 VIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQ-KNFDL-VWCR 157 (393)
Q Consensus 80 ~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~-~~~~ 157 (393)
.+ +...+++|+.+|++++ +++++++.++.|++.+.|+.+++++|+.++..+-......+. ....+ ++|+
T Consensus 149 -~~-------~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~ 219 (397)
T 3hdq_A 149 -VA-------EKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPL 219 (397)
T ss_dssp -HC-------CCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEET
T ss_pred -cc-------cCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccC
Confidence 11 1235789999999985 899999999999999999999999998754321110000000 01233 4799
Q ss_pred CCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHHhhcccccCcHHHH
Q 016211 158 GTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFL 237 (393)
Q Consensus 158 gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~ 237 (393)
||++. ++++|+ ++.|++|++|++|+++ . +++.+|+||+|+|++.+...
T Consensus 220 gGy~~-l~e~l~---~~~g~~V~l~~~v~~~---~------------~~~~~d~vI~T~P~d~~~~~------------- 267 (397)
T 3hdq_A 220 HGYTR-MFQNML---SSPNIKVMLNTDYREI---A------------DFIPFQHMIYTGPVDAFFDF------------- 267 (397)
T ss_dssp TCHHH-HHHHHT---CSTTEEEEESCCGGGT---T------------TTSCEEEEEECSCHHHHTTT-------------
T ss_pred CCHHH-HHHHHH---hccCCEEEECCeEEec---c------------ccccCCEEEEcCCHHHHHHH-------------
Confidence 99887 666664 3468999999999843 1 12458999999999776321
Q ss_pred hhccCCceeEEEEEEEeccCCC
Q 016211 238 KVLNLASIDVVSVKLWFDKKVT 259 (393)
Q Consensus 238 ~~~~~~~~~~~~v~l~~~~~~~ 259 (393)
...++.|.++..+.+.++.+..
T Consensus 268 ~~g~L~yrsl~~~~~~~~~~~~ 289 (397)
T 3hdq_A 268 CYGKLPYRSLEFRHETHDTEQL 289 (397)
T ss_dssp TTCCCCEEEEEEEEEEESSSCS
T ss_pred hcCCCCCceEEEEEEEeccccC
Confidence 2346788888888888986543
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.12 E-value=3.5e-12 Score=118.16 Aligned_cols=200 Identities=12% Similarity=0.023 Sum_probs=124.8
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCcccceeeccCCceeccccccCCCCCCCCcceec---cccCCCCCHhhhhcchhHHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF---YTQFSRLPLVDRLTSLPLMA 78 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~---~~~~~~ls~~~k~~~~~~~~ 78 (393)
|+|...+++++++++++|... .+.+......+|+.+. + |.+... ++... ++.+.. +++.
T Consensus 56 ~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~g~~~~---------~--p~~~~~~~~l~~~~--~~~~~~---~~l~ 117 (367)
T 1i8t_A 56 HIFHTNDKYIWDYVNDLVEFN--RFTNSPLAIYKDKLFN---------L--PFNMNTFHQMWGVK--DPQEAQ---NIIN 117 (367)
T ss_dssp CCEEESCHHHHHHHHTTSCBC--CCCCCCEEEETTEEEE---------S--SBSHHHHHHHHCCC--CHHHHH---HHHH
T ss_pred ceecCCCHHHHHHHHHhhhhh--hccccceEEECCeEEE---------c--CCCHHHHHHHhccC--CHHHHH---HHHH
Confidence 677778899999999998632 2222212223554321 2 333221 21111 222211 2222
Q ss_pred HHhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhccC-Ccce-EEe
Q 016211 79 AVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWC 156 (393)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~~-~~~ 156 (393)
...+ .+...+++|+.+|++++ +++++++.++.|++.++|+.+++++|+.++..+.......+.. ...+ +++
T Consensus 118 ~~~~------~~~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p 190 (367)
T 1i8t_A 118 AQKK------KYGDKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIP 190 (367)
T ss_dssp HHTT------TTCCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECB
T ss_pred HHhh------ccCCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhccc
Confidence 2111 01123679999999997 8999999999999999999999999987542110000001110 1123 489
Q ss_pred cCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHHhhcccccCcHHH
Q 016211 157 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEF 236 (393)
Q Consensus 157 ~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~ 236 (393)
+||+++ ++++|++ |++|++|++|++|. . ++ ++.||+||+|+|++.+.++
T Consensus 191 ~gG~~~-l~~~l~~-----g~~i~l~~~V~~i~--~---~v--------~~~~D~VV~a~p~~~~~~~------------ 239 (367)
T 1i8t_A 191 VGGYTK-LIEKMLE-----GVDVKLGIDFLKDK--D---SL--------ASKAHRIIYTGPIDQYFDY------------ 239 (367)
T ss_dssp TTCHHH-HHHHHHT-----TSEEECSCCGGGSH--H---HH--------HTTEEEEEECSCHHHHTTT------------
T ss_pred CCCHHH-HHHHHhc-----CCEEEeCCceeeec--h---hh--------hccCCEEEEeccHHHHHHH------------
Confidence 999988 6677654 68999999999885 2 12 2468999999999876432
Q ss_pred HhhccCCceeEEEEEEEeccCC
Q 016211 237 LKVLNLASIDVVSVKLWFDKKV 258 (393)
Q Consensus 237 ~~~~~~~~~~~~~v~l~~~~~~ 258 (393)
.+.++.|.++..+.+.++++.
T Consensus 240 -~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 240 -RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp -TTCCCCEEEEEEEEEEESSSC
T ss_pred -hhCCCCCceEEEEEEEecccc
Confidence 234577888888888888763
No 32
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.11 E-value=5.3e-12 Score=118.36 Aligned_cols=204 Identities=9% Similarity=-0.012 Sum_probs=123.3
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCcccceeeccCCceeccccccCCCCCCCCcce--e-ccccCCCCCHhhhhcchhHHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGT--L-FYTQFSRLPLVDRLTSLPLMA 78 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~--~-~~~~~~~ls~~~k~~~~~~~~ 78 (393)
|.|...+++++++++++|+-. .+.+...+..+|+.+. + |.+. . .++... ++ .++++ ..+.
T Consensus 65 ~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~G~~~~---------~--p~~~~~~~~l~~~~-~~-~~~~~--~~l~ 127 (399)
T 1v0j_A 65 HLFHTSNKRVWDYVRQFTDFT--DYRHRVFAMHNGQAYQ---------F--PMGLGLVSQFFGKY-FT-PEQAR--QLIA 127 (399)
T ss_dssp CCEEESCHHHHHHHTTTCCBC--CCCCCEEEEETTEEEE---------E--SSSHHHHHHHHTSC-CC-HHHHH--HHHH
T ss_pred cEEcCCcHHHHHHHHHhhhhh--ccccceEEEECCEEEe---------C--CCCHHHHHHHhccc-CC-HHHHH--HHHH
Confidence 667778999999999999832 2222222223565321 2 2322 1 122221 12 22322 1111
Q ss_pred HHhhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhcc-CCcce-EEe
Q 016211 79 AVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQ-KNFDL-VWC 156 (393)
Q Consensus 79 ~~~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~-~~~ 156 (393)
.... . ....+++|+.+|+++. ++++.++.++.|++.+.++.+++++|+.++..+...+...+. ....+ +++
T Consensus 128 ~~~~-----~-~~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p 200 (399)
T 1v0j_A 128 EQAA-----E-IDTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLP 200 (399)
T ss_dssp HHGG-----G-SCTTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECB
T ss_pred HHhh-----c-cCCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccc
Confidence 1111 0 0123678999999984 899999999999999999999999998765211100000111 11123 388
Q ss_pred cCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEE-ecCEEEEecChhhHHHHhhcccccCcHH
Q 016211 157 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREE 235 (393)
Q Consensus 157 ~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~-~ad~VI~a~p~~~~~~Ll~~~~~~~~~~ 235 (393)
+||+++ ++++|++ +.|++|++|++|++|.. . | + ++ .||+||+|+|++.+.++
T Consensus 201 ~gG~~~-l~~~l~~---~~g~~I~l~~~V~~I~~----~-v-----~--~~~~aD~VI~t~p~~~l~~~----------- 253 (399)
T 1v0j_A 201 TDGYTA-WLQNMAA---DHRIEVRLNTDWFDVRG----Q-L-----R--PGSPAAPVVYTGPLDRYFDY----------- 253 (399)
T ss_dssp TTHHHH-HHHHHTC---STTEEEECSCCHHHHHH----H-H-----T--TTSTTCCEEECSCHHHHTTT-----------
T ss_pred cccHHH-HHHHHHh---cCCeEEEECCchhhhhh----h-h-----h--hcccCCEEEECCcHHHHHhh-----------
Confidence 999988 7777764 45789999999999962 1 2 1 34 69999999999987654
Q ss_pred HHhhccCCceeEEEEEEEeccCC
Q 016211 236 FLKVLNLASIDVVSVKLWFDKKV 258 (393)
Q Consensus 236 ~~~~~~~~~~~~~~v~l~~~~~~ 258 (393)
.+.++.|.++..+.+.++.+.
T Consensus 254 --~l~~l~y~s~~~~~~~~~~~~ 274 (399)
T 1v0j_A 254 --AEGRLGWRTLDFEVEVLPIGD 274 (399)
T ss_dssp --TTCCCCEEEEEEEEEEESSSC
T ss_pred --hhCCCCcceEEEEEEEEcccc
Confidence 123567887778888887653
No 33
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.06 E-value=2.4e-11 Score=113.24 Aligned_cols=197 Identities=11% Similarity=0.034 Sum_probs=122.6
Q ss_pred cccCCCCchHHHHHHHhCCCCCCCcccceeeccCCceeccccccCCCCCCCCcceec-cccCCCCCHhhhhcchhHHHHH
Q 016211 2 QGFWYPFRNIFSLVDELGIKPFTGWMKSAQYSEEGLEVEFPIFQDLNQLPTPLGTLF-YTQFSRLPLVDRLTSLPLMAAV 80 (393)
Q Consensus 2 H~~~~~y~~~~~Ll~elG~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~-~~~~~~ls~~~k~~~~~~~~~~ 80 (393)
|+|...|++++++++++|... .+........+|+.+. +|..++... ++... +++.+.. +.+...
T Consensus 60 ~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~g~~~~---------~P~~~~~~~~l~~~~-~~~~~~~---~~l~~~ 124 (384)
T 2bi7_A 60 HIFHTDNETVWNYVNKHAEMM--PYVNRVKATVNGQVFS---------LPINLHTINQFFSKT-CSPDEAR---ALIAEK 124 (384)
T ss_dssp CCEEESCHHHHHHHHTTSCEE--ECCCCEEEEETTEEEE---------ESCCHHHHHHHTTCC-CCHHHHH---HHHHHH
T ss_pred eEECCCCHHHHHHHHHHhhhc--ccccceEEEECCEEEE---------CCCChhHHHHHhccc-CCHHHHH---HHHHHh
Confidence 777788999999999999631 1112111123554321 222211111 22221 2322221 112221
Q ss_pred hhcCCCchhhhcccCccHHHHHHHcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhc-cCCcce-EEecC
Q 016211 81 IDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAH-QKNFDL-VWCRG 158 (393)
Q Consensus 81 ~~~~~~~~~~~~~d~~s~~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~-~~~~g 158 (393)
.. .. ..+++|+.+|+.++ +++++++.++.|++.++|+.+++++|+..+..+...+...+ .....+ ++++|
T Consensus 125 ~~---~~----~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~g 196 (384)
T 2bi7_A 125 GD---ST----IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKC 196 (384)
T ss_dssp SC---CS----CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETT
T ss_pred hh---cc----CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECc
Confidence 11 01 24689999999986 89999999999999999999999999876421100000011 111223 38999
Q ss_pred CchhHhHHHHHHHHHHcCCeEecCceee-eEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHHhhcccccCcHHHH
Q 016211 159 TLREKIFEPWMDSMRTRGCEFLDGRRVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFL 237 (393)
Q Consensus 159 G~~~~l~~~l~~~l~~~G~~i~l~~~V~-~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~ 237 (393)
|+++ ++++|++ +.|++|++|++|+ +|.. .||+||+|+|++.+.+++
T Consensus 197 G~~~-l~~~l~~---~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------ 243 (384)
T 2bi7_A 197 GYTQ-MIKSILN---HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------ 243 (384)
T ss_dssp HHHH-HHHHHHC---STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------
T ss_pred CHHH-HHHHHHh---cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------
Confidence 9988 7777764 3578999999999 7741 289999999999877642
Q ss_pred hhccCCceeEEEEEEEec
Q 016211 238 KVLNLASIDVVSVKLWFD 255 (393)
Q Consensus 238 ~~~~~~~~~~~~v~l~~~ 255 (393)
+.++.|.+...+.+.+|
T Consensus 244 -lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 244 -YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp -TCCCCEEEEEEEEEEEE
T ss_pred -cCCCCcceEEEEEEEeC
Confidence 23467888777777787
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.23 E-value=9.6e-08 Score=78.60 Aligned_cols=84 Identities=11% Similarity=0.192 Sum_probs=59.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhh-cCCCCCceeee--EEeecCCC-----ccc-cCCCCc-CCCCCCCCCCCceEEecc
Q 016211 303 ANELMPLKDDQVVAKAVSYLSKCI-KDFSTATVMDH--KIRRFPKS-----LTH-FFPGSY-KYMMRGFTSFPNLFMAGD 372 (393)
Q Consensus 303 ~~~~~~~~~~e~~~~~~~~l~~~~-p~~~~~~~~~~--~~~~~~~a-----~~~-~~~g~~-~~~~~~~~~~~~L~laGd 372 (393)
+..+..++++++++.++++|+++| |.+ . .+... .+++|... .+. +.||.. .+.+...+|.++|||||+
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~-~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe 125 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI-E-VFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGE 125 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG-G-GTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc-H-hhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEH
Confidence 455667889999999999999999 655 2 45455 66777532 222 456643 223344567899999999
Q ss_pred cccc----CCCc-cccchhcc
Q 016211 373 WITT----RHGS-WSQVTFKL 388 (393)
Q Consensus 373 ~~~~----~~ga-~s~~~a~~ 388 (393)
+|+. ++|| .||+|||+
T Consensus 126 ~ts~~~g~~eGAl~SG~raA~ 146 (181)
T 2e1m_C 126 HVSLKHAWIEGAVETAVRAAI 146 (181)
T ss_dssp GGTTSTTSHHHHHHHHHHHHH
T ss_pred HHcCCccCHHHHHHHHHHHHH
Confidence 9993 7788 69999974
No 35
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.66 E-value=0.00081 Score=61.99 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+++++|++|..++ +++ .|.++++++.||.||+|+..+.
T Consensus 166 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 166 VCKAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKTPSGDVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEETTEEEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEcCCceEEcCEEEECCChhH
Confidence 67888888888999999999999999876 446 5777655899999999999874
No 36
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.60 E-value=0.00015 Score=66.58 Aligned_cols=114 Identities=11% Similarity=0.049 Sum_probs=67.2
Q ss_pred hcccCccHHHHHH-HcCCCHHHHHHHHHHHHHhhcCCCcccccHHHHHHHHHHHHhhccCCcceEEecCCchhHhHHHHH
Q 016211 91 RKYDSITARELFK-QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 169 (393)
Q Consensus 91 ~~~d~~s~~~~l~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~l~~~l~ 169 (393)
+++|++|+.+||+ +.++++..++.+ ..++ .+. ...++|+..++... + ....+....-+.||++. |+++|+
T Consensus 257 ~~lD~~S~~~~L~~~~g~s~~~~~~~-~~~~--~~~-~~~~~s~l~~l~~~---~-~~~~~~~~~~i~GG~~~-l~~~l~ 327 (376)
T 2e1m_A 257 RDFDGYSMGRFLREYAEFSDEAVEAI-GTIE--NMT-SRLHLAFFHSFLGR---S-DIDPRATYWEIEGGSRM-LPETLA 327 (376)
T ss_dssp HHHTTCBHHHHHHHTSCCCHHHHHHH-HHHT--TCT-TTTTSBHHHHHHHC---S-CSCTTCCEEEETTCTTH-HHHHHH
T ss_pred HHHhCCCHHHHHhhccCCCHHHHHHH-Hhhc--Ccc-ccchhhHHHHHHHh---h-hhccCCceEEECCcHHH-HHHHHH
Confidence 4579999999999 788999877544 3332 121 12255665544321 0 11123445667899998 889888
Q ss_pred HHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecCh
Q 016211 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (393)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~ 218 (393)
+.+ +.+|++|++|++|..+++ | +..+..+......-+|++.+-+
T Consensus 328 ~~l---~~~i~l~~~V~~I~~~~~-g-v~v~~~~~~~~~g~~~~~~~~~ 371 (376)
T 2e1m_A 328 KDL---RDQIVMGQRMVRLEYYDP-G-RDGHHGELTGPGGPAVAIQTVP 371 (376)
T ss_dssp HHG---GGTEECSEEEEEEEECCC-C--------------CCEEEEEEE
T ss_pred Hhc---CCcEEecCeEEEEEECCC-c-eEEEeCCCcCCCCCeeEEEecC
Confidence 766 568999999999999875 3 4322222223345677776533
No 37
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.53 E-value=0.0036 Score=58.01 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+++++|++|..++ +++++|.++++++.||.||+|+..+.
T Consensus 176 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 176 VAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhH
Confidence 67888888888999999999999999876 45777877544899999999999865
No 38
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.37 E-value=0.00015 Score=55.37 Aligned_cols=113 Identities=10% Similarity=0.015 Sum_probs=52.0
Q ss_pred eEEecCEEEEecChhhHHHHhhcccccCcHHHHhhccCCceeEEEEEEEeccCCCCCCCCcceeecCCCccccceehhhh
Q 016211 205 ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKI 284 (393)
Q Consensus 205 ~~~~ad~VI~a~p~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (393)
++++||+||+|+|+.+++.+...++++ ....+.++++.+.+..++.+.|++++|.. .. .. ++.+..
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~--~~-~~----------gd~s~~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWEF--TE-AD----------WKRELD 69 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGC--CH-HH----------HHHHHH
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCCC--CC-cc----------ccccCC
Confidence 568999999999999998775554442 23345778899999999999999999942 11 10 111111
Q ss_pred cccccCCCCcEEEEE-ee-cCCCCCCCCHHHHHHHHHHHHhhhhcCCCCCceee
Q 016211 285 YDEHKDDSATVIQAD-FY-HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMD 336 (393)
Q Consensus 285 ~~~~~~~~~~l~~~~-~~-~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~~~~ 336 (393)
+. ..+.++.++ .. .+.+|..+++ |..+.++..|..++|+..+.+++.
T Consensus 70 -~~---~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~~~~~~~ 118 (130)
T 2e1m_B 70 -AI---APGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVDESRIGE 118 (130)
T ss_dssp -HH---STTHHHHHHHHCCCSCCCC-----------------------------
T ss_pred -CC---CCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCcHHHHHH
Confidence 10 123332222 12 2346767766 558889999999999764334443
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.34 E-value=0.0028 Score=57.80 Aligned_cols=60 Identities=13% Similarity=0.182 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEecChhhHHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGISTLQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VI~a~p~~~~~~Ll~ 226 (393)
+.+.|.+.+++.|++|+++++|++|+.+++ +.+ .|.+ +| .+++||.||+|+..+. ..|+.
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~a~~VV~A~G~~s-~~l~~ 214 (369)
T 3dme_A 152 LMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGF-ELDFGGAEPMTLSCRVLINAAGLHA-PGLAR 214 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSE-EEEECTTSCEEEEEEEEEECCGGGH-HHHHH
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceE-EEEECCCceeEEEeCEEEECCCcch-HHHHH
Confidence 778889999999999999999999998864 324 4666 45 4899999999999984 34443
No 40
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.21 E-value=0.00085 Score=63.19 Aligned_cols=55 Identities=20% Similarity=0.359 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHcCCeEecCc---eeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~---~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|++++ +|++|..++ +++.+|++ +|++++||.||+|+..+.
T Consensus 163 ~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 163 ALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCCh
Confidence 77888888999999999999 999999877 56887888 567899999999999985
No 41
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.16 E-value=0.011 Score=57.47 Aligned_cols=56 Identities=30% Similarity=0.318 Sum_probs=47.2
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeC----C--eEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~----g--~~~~ad~VI~a~p~~~ 220 (393)
.+...+.+.+++.|++|+++++|++|..++ +++++|++. | .+++||.||.|+.++.
T Consensus 171 ~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 171 RLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 477788888888999999999999999987 567777762 3 4789999999999975
No 42
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.94 E-value=0.0017 Score=59.70 Aligned_cols=55 Identities=16% Similarity=0.279 Sum_probs=47.1
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.|++|+++++|++|..++ +++ .|+++++++.||+||+|+.++.
T Consensus 155 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~~-~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 155 ALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GAW-EVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCCCEEEEET--TEE-EEECSSEEEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--CeE-EEEeCCCEEEcCEEEECCChhH
Confidence 377888999999999999999999999887 444 5777666899999999999875
No 43
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.85 E-value=0.0033 Score=57.84 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=47.8
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.+.+.+++.|++|+.+++|++|..++ +++.+|++++++++||.||+|+..+.
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhH
Confidence 367788888888999999999999999876 55777888655899999999999875
No 44
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.68 E-value=0.0064 Score=57.39 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=51.2
Q ss_pred EEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 154 ~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
.++..+....+.+.|.+.+++.|++|+++++|++|..++ +++.+|.+ +|++++||.||+|+....
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 445433334477889999989999999999999999876 56677877 466799999999998765
No 45
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.58 E-value=0.0047 Score=59.62 Aligned_cols=56 Identities=29% Similarity=0.296 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhH
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 221 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~ 221 (393)
+.+.|.+.+++.|++|+++++|++|..++ +++.+|++ +|+++.||.||+|+.....
T Consensus 222 l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 222 MIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCChh
Confidence 66788888888999999999999999887 56777887 4778999999999998763
No 46
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.54 E-value=0.0052 Score=57.92 Aligned_cols=62 Identities=26% Similarity=0.374 Sum_probs=49.6
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEe---------------cCCCCeEEEEEeCCeEE--ecCEEEEecChhhHHHHh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQELI 225 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~---------------~~~~~~v~~v~~~g~~~--~ad~VI~a~p~~~~~~Ll 225 (393)
.+.+.|.+.+++.|++|+.+++|++|.. ++ +++++|.++++++ .||.||+|+.++. .+|+
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s-~~l~ 258 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWS-NRLL 258 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGH-HHHH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCH-HHHH
Confidence 3778888889999999999999999997 44 5676777754478 9999999999985 3455
Q ss_pred hc
Q 016211 226 KN 227 (393)
Q Consensus 226 ~~ 227 (393)
+.
T Consensus 259 ~~ 260 (448)
T 3axb_A 259 NP 260 (448)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 47
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.50 E-value=0.0068 Score=56.36 Aligned_cols=57 Identities=23% Similarity=0.278 Sum_probs=47.7
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+.+.+++.|++|+++++|++|..++ +++.+|.+ +|+++.||.||+|+....
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 3366778888899999999999999999876 56777877 688899999999998743
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.47 E-value=0.0068 Score=56.54 Aligned_cols=57 Identities=19% Similarity=0.269 Sum_probs=47.6
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+.+.+++.|++|++++.|++|..++ +++.+|.+ +|+++.||.||+|+....
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 3366778888889999999999999999876 56777877 688899999999998654
No 49
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.37 E-value=0.0084 Score=61.32 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=48.8
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.|++|+.+++|++|..++ +++++|.+++++++||+||+|+..+.
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccch
Confidence 377888999999999999999999999876 56777888766899999999999986
No 50
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.31 E-value=0.0078 Score=55.69 Aligned_cols=54 Identities=31% Similarity=0.442 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+++++|++|+.++ +++. |.+++++++||.||+|+..+.
T Consensus 155 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v~-v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 155 TLAALFTLAQAAGATLRAGETVTELVPDA--DGVS-VTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEE-EEESSCEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeEE-EEECCCEEEcCEEEEcCCcCh
Confidence 66788888888899999999999999876 4464 666656899999999999874
No 51
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.27 E-value=0.014 Score=54.51 Aligned_cols=63 Identities=17% Similarity=0.297 Sum_probs=49.8
Q ss_pred EEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 154 ~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.++...... +.+.|.+.+++.|++|+++++|++|..++ +.+ .|.+++++++||.||+|+....
T Consensus 125 ~~~~~~~~~-l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~-~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 125 LFCDHSAKD-IIRMLMAEMKEAGVQLRLETSIGEVERTA--SGF-RVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp EEESSCHHH-HHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTEEEEESEEEECCCCSS
T ss_pred EeeCCCHHH-HHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCcEEEeeEEEECCCCcc
Confidence 344444344 77889999998999999999999999876 444 4777655899999999998864
No 52
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.27 E-value=0.0085 Score=54.81 Aligned_cols=54 Identities=19% Similarity=0.383 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+.+++|++|+.+++ ++ .|.++++++.||.||+|+.++.
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~--~~-~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDD--GV-TIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSS--SE-EEEESSCEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCC--EE-EEEECCCeEEcCEEEEcCCccH
Confidence 678888888889999999999999998763 35 3666544699999999999875
No 53
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.21 E-value=0.011 Score=54.47 Aligned_cols=60 Identities=18% Similarity=0.424 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhHHHHhhc
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKN 227 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~~~Ll~~ 227 (393)
+.+.+.+.+++.|++|+.+++|++|+.+++ ++. |.+++++++||.||+|+..+. ..+++.
T Consensus 152 ~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~--~~~-v~~~~g~~~a~~vV~A~G~~~-~~l~~~ 211 (389)
T 2gf3_A 152 CIRAYRELAEARGAKVLTHTRVEDFDISPD--SVK-IETANGSYTADKLIVSMGAWN-SKLLSK 211 (389)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSS--CEE-EEETTEEEEEEEEEECCGGGH-HHHGGG
T ss_pred HHHHHHHHHHHCCCEEEcCcEEEEEEecCC--eEE-EEeCCCEEEeCEEEEecCccH-HHHhhh
Confidence 678888889899999999999999998763 353 667666899999999999875 345443
No 54
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.19 E-value=0.012 Score=56.43 Aligned_cols=56 Identities=21% Similarity=0.300 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CCe--EEecC-EEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAG-AVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad-~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+++++|++|+.+++ ++|++|.+ +|+ ++.|| .||+|+....
T Consensus 204 l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 204 LMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 778899999999999999999999999843 67888876 443 58996 9999988765
No 55
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.13 E-value=0.0095 Score=59.41 Aligned_cols=54 Identities=17% Similarity=0.258 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+++++|++|+.++ +++ .|.+ +|+++.||+||+|+..+.
T Consensus 419 l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 419 LTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeE-EEEECCCCEEECCEEEECCCcch
Confidence 77888888888999999999999999987 455 5777 567899999999999874
No 56
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.00 E-value=0.018 Score=56.06 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=47.0
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VI~a~p~~~ 220 (393)
..+.+.|.+.+++.|++|+++++|++|..+++ ++|.+|++ +|+ ++.||.||+|+....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 34778888889889999999999999998753 46777665 465 689999999998753
No 57
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.99 E-value=0.013 Score=55.25 Aligned_cols=57 Identities=12% Similarity=0.205 Sum_probs=46.7
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.-+.+.+.+.+++.|++|+++++|++|..++ +++..|.++|+++.||.||+|++...
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCCC
Confidence 3366778888899999999999999998654 45665667888899999999998653
No 58
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.94 E-value=0.011 Score=58.97 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCe-EEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~-~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+++++|++|+.++ +++ .|.+ +|+ ++.||+||+|+..+.
T Consensus 414 l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 414 LTHALMMLAQQNGMTCHYQHELQRLKRID--SQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEECS--SSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 77888888889999999999999999987 345 4666 456 899999999999874
No 59
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=95.89 E-value=0.018 Score=56.16 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=46.3
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
.+...+.+.+++.|++|+.+++|++|..++ +++++|++ +|+ +++||.||.|+.++.
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 366777888888999999999999999887 56777774 343 799999999999985
No 60
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.76 E-value=0.021 Score=55.59 Aligned_cols=57 Identities=19% Similarity=0.282 Sum_probs=46.6
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.|++|+++++|++|+.+++ ++|.+|++ +|+ ++.||.||+|+....
T Consensus 251 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 251 EIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 4778888889889999999999999998763 45777765 465 689999999998765
No 61
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.73 E-value=0.026 Score=55.01 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=45.5
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VI~a~p~~~ 220 (393)
..+.+.|.+.+++.|++|+++++|++|..+++ +++++|.+ +|+ ++.||.||+|+....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 34778889999999999999999999987652 35777765 464 689999999998643
No 62
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.73 E-value=0.018 Score=53.09 Aligned_cols=60 Identities=10% Similarity=0.030 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCeEEecCEEEEecChhh-HHHHh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIST-LQELI 225 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ad~VI~a~p~~~-~~~Ll 225 (393)
+.+.|.+.+++.|++|+.+++|++|..++ +++.+|++ ++++++||.||.|...+. +.+.+
T Consensus 104 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 56777888888899999999999999886 56776766 246899999999998875 34443
No 63
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.58 E-value=0.037 Score=52.45 Aligned_cols=57 Identities=19% Similarity=0.255 Sum_probs=45.8
Q ss_pred hhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
...+.+.+.+.+++.|++|+++++|++|..++ +++. |.+ +|+++.||.||+|+....
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~-v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVA-RVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEE-EEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEE-EEEeCCCEEEcCEEEECCCCCc
Confidence 33466778888899999999999999998865 4565 444 788999999999998753
No 64
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.50 E-value=0.03 Score=51.89 Aligned_cols=63 Identities=13% Similarity=0.184 Sum_probs=48.3
Q ss_pred EEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEec----CCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 154 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 154 ~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~----~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.++...... +.+.+.+.+++.|++|+++++|++|..+ + +++ .|.+++++++||+||+|+....
T Consensus 102 ~~p~~~~~~-l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~~-~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 102 LFCDEGAEQ-IVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VRF-VLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EEETTCTHH-HHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CCE-EEEETTEEEEESEEEECCCCSS
T ss_pred EccCCCHHH-HHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--CeE-EEEECCCEEECCEEEECCCCcc
Confidence 344332233 7788888888899999999999999976 4 345 4677666899999999997765
No 65
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.45 E-value=0.03 Score=47.52 Aligned_cols=53 Identities=15% Similarity=0.073 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++. |++|+ +++|++|..++ +++++|.+ +|++++||.||.|+...
T Consensus 70 ~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 70 FHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCC
Confidence 566777778876 88888 67999999876 56767777 57789999999999884
No 66
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.43 E-value=0.043 Score=51.70 Aligned_cols=55 Identities=24% Similarity=0.271 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+++++|++|..++ +++.+|++ +|+ +++||.||.|.....
T Consensus 102 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 102 YNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 56777888888899999999999999876 56765554 565 799999999999875
No 67
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.41 E-value=0.037 Score=51.85 Aligned_cols=54 Identities=20% Similarity=0.383 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEe--cCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~--~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++|+++++|++|.. ++ +++..|.+ +|+++.||.||+|++..
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 566778888889999999999999987 44 45666777 67889999999999864
No 68
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.39 E-value=0.028 Score=53.03 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=45.4
Q ss_pred hhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.++++++.||.||+|++..
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~~~g~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLETSEQEISCDSGIFALNLH 243 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEESSCEEEESEEEECSCCB
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEECCCEEEeCEEEECcCCC
Confidence 34466778888899999999999999999766 446 577765589999999998864
No 69
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.15 E-value=0.016 Score=53.84 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHcCCeEecCceee---------eEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~---------~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+.+++|+ +|..++ +++ +|.+++++++||.||+|+.++.
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccH
Confidence 67888888888999999999999 888766 446 5767656899999999999875
No 70
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.09 E-value=0.049 Score=52.09 Aligned_cols=55 Identities=18% Similarity=0.148 Sum_probs=45.7
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
.+...+.+.+++.|++|+.+++|++|..++ + +++|.+ +|+ +++||.||.|+.++.
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARREN--G-LWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET--T-EEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--C-EEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 367788888889999999999999999875 2 556666 464 789999999999985
No 71
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.09 E-value=0.055 Score=52.84 Aligned_cols=56 Identities=13% Similarity=0.233 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeC----------------CeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----------------KETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~----------------g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+.+++|++|..+++ +++.+|.++ |.+++||.||.|.....
T Consensus 146 l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 146 LVSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 667788888888999999999999998765 467767663 25799999999999875
No 72
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.08 E-value=0.036 Score=51.54 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++.|++|++++.|++|..++ ++.+|++ +|+++.||.||+|++...
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCee
Confidence 55667777888999999999999998754 3445677 688999999999998754
No 73
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.00 E-value=0.044 Score=44.25 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++.|++|+++ +|++|..+++ .+ .|.++++++.||.||+|+....
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~--~~-~v~~~~g~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGG--VF-EVETEEGVEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSS--SE-EEECSSCEEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCC--EE-EEEECCCEEEECEEEECCCCCC
Confidence 6677788888899999999 9999998763 34 3666433899999999998764
No 74
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.95 E-value=0.057 Score=51.93 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=44.1
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeE--EEEEe-CCe-EEecCEEEEecChh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVC-GKE-TYSAGAVVLAVGIS 219 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v--~~v~~-~g~-~~~ad~VI~a~p~~ 219 (393)
.+.+.+.+.+++.|++|+++++|++|..+++ +++ ..|++ +|+ ++.||.||+|+...
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 3667788889999999999999999997653 443 23566 566 89999999998754
No 75
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.92 E-value=0.048 Score=51.92 Aligned_cols=54 Identities=26% Similarity=0.339 Sum_probs=44.4
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
.+.+.+.+.+++.|++|+++++|++|..++ +++ .|++ +|+++.||.||+|++..
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 366778888888999999999999999876 345 3666 67789999999999864
No 76
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.92 E-value=0.073 Score=47.28 Aligned_cols=54 Identities=17% Similarity=0.290 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C----C--eEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----K--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~----g--~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++|+++++|++|..++ +++.+|++ + | +++.||.||+|++..
T Consensus 186 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 186 LIKRLMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 55667777888899999999999998765 35655655 2 4 579999999998864
No 77
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.91 E-value=0.05 Score=51.98 Aligned_cols=57 Identities=12% Similarity=0.176 Sum_probs=45.1
Q ss_pred hhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
...+.+.+.+.+++.|++|+++++|++|..++ +++. |.+ +|+++.||.||+|+....
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~-v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG--AGVL-VTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSEE-EEETTSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEEE-EEECCCcEEEcCEEEECCCCCc
Confidence 33366778888899999999999999999765 3353 555 577899999999987653
No 78
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.82 E-value=0.056 Score=49.67 Aligned_cols=55 Identities=16% Similarity=0.150 Sum_probs=44.5
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.+ +|++++||.||+|+....
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGL-EAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEE-EEEECCCCEEECCEEEECcCCCc
Confidence 366778888888999999999999998765 334 3555 678899999999998653
No 79
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=94.80 E-value=0.069 Score=51.22 Aligned_cols=55 Identities=16% Similarity=0.146 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CC--eEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+.+++|++|..++ +++.+|++ +| .+++||.||.|+....
T Consensus 113 l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 113 FDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 66778888888899999999999999977 56766665 36 3799999999999865
No 80
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.80 E-value=0.057 Score=51.70 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=44.9
Q ss_pred HHHHHHHHHcC-CeEecCceeeeEEecCCCCeEEEEEe---CC-----eEEecCEEEEecChhhHHHHh
Q 016211 166 EPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 225 (393)
Q Consensus 166 ~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-----~~~~ad~VI~a~p~~~~~~Ll 225 (393)
.++.+.+++.| ++|++++.|++|..+++++++++|++ +| .++.|+.||+|+..-...+||
T Consensus 225 ~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL 293 (504)
T 1n4w_A 225 KTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELL 293 (504)
T ss_dssp TTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHH
Confidence 34445555666 89999999999999854247888876 45 368899999999987666554
No 81
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=94.79 E-value=0.067 Score=51.83 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++. |++|+++ +|++|..+++ +.+.+|++ +|++++||.||.|+....
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEECCEEEECCCCch
Confidence 667788888888 9999999 9999998654 45666777 577899999999998865
No 82
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.73 E-value=0.059 Score=51.46 Aligned_cols=55 Identities=16% Similarity=0.244 Sum_probs=44.0
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
-+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|++ +|+++.||.||+|+...
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTD-GSK-HVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ceE-EEEECCCcEEEcCEEEECCCCc
Confidence 3667788888999999999999999987653 223 4566 67789999999998764
No 83
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=94.66 E-value=0.07 Score=49.54 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCe--EEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~--~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+++.|++|+.+++|++|+.+++ +.+..|.+ +|+ +++||.||.|+.... +.+++.
T Consensus 108 ~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 108 FDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 667778888888999999999999998864 32233444 565 699999999998875 344443
No 84
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.65 E-value=0.083 Score=49.97 Aligned_cols=55 Identities=16% Similarity=0.166 Sum_probs=45.0
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.+.+.+++.|++|+++++|++|..++ +. ..|.++++++.||.||+|+....
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GE-FVLTTTHGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEET--TE-EEEEETTEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CE-EEEEECCcEEEcCEEEECCCCCc
Confidence 366778888899999999999999998765 33 34677788899999999988753
No 85
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.60 E-value=0.059 Score=51.36 Aligned_cols=56 Identities=14% Similarity=0.191 Sum_probs=44.5
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|.+ +|+++.||.||+|+....
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNAD-GTR-HVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEE-EEEECCCcEEEcCEEEEccCCCc
Confidence 3667788888999999999999999987653 223 4666 577899999999997643
No 86
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=94.59 E-value=0.084 Score=50.52 Aligned_cols=55 Identities=20% Similarity=0.130 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+.+ +|++|..+++ +.+.+|++ +|++++||.||.|...+.
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEEcCEEEECCCcch
Confidence 6677888888889999999 9999998654 45566777 567899999999999865
No 87
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=94.59 E-value=0.049 Score=50.26 Aligned_cols=61 Identities=18% Similarity=0.166 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHc-CCeEecCceeeeEEecCCCCeEE-EEEe-CCeEEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVC-GKETYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~-~v~~-~g~~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+++. |++|+++++|++|+.+++ ++. .|++ +|++++||.||.|...+. +.+.+.
T Consensus 109 l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~--~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 109 LRRLVLEKIDGEATVEMLFETRIEAVQRDER--HAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHTTCTTEEEECSCCEEEEEECTT--SCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC--ceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 667788888887 899999999999998774 352 3666 577899999999999875 455553
No 88
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.076 Score=50.43 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=43.8
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC-eEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g-~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|+++++|++|..+++ +++..|.+ +| +++.||.||+|+...
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 33667788888889999999999999987643 32334666 57 789999999998853
No 89
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=94.52 E-value=0.075 Score=51.90 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=46.1
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.|++|+++++|++|..+++ +++.+|.+ +|+ ++.|+.||+|+....
T Consensus 144 ~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 144 ALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 4778888888888999999999999998632 56777764 354 589999999998854
No 90
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.49 E-value=0.094 Score=51.88 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=46.1
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
.+...|.+.+.+.|++|+.+++|++|..++ +++.+|.+ +|+ ++.|++||+|+....
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 377888888888899999999999999876 67777754 354 489999999998765
No 91
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.48 E-value=0.074 Score=50.72 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++|++++.|++|..++ +++ .|++ +|+++.||.||+|++..
T Consensus 228 ~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCC
Confidence 55677778888999999999999998765 445 4666 68889999999998764
No 92
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.40 E-value=0.061 Score=51.25 Aligned_cols=55 Identities=20% Similarity=0.364 Sum_probs=44.2
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|++|.. + +++..|.++|+++.||.||+|++..
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~--~~v~~v~~~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG-N--GKVEKIITDKNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC-S--SSCCEEEESSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-C--CcEEEEEECCcEEECCEEEECCCCC
Confidence 33667778888889999999999999986 3 3455566788889999999998764
No 93
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.38 E-value=0.074 Score=52.19 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=46.5
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
.+...|.+.+.+.|++|+.+++|++|..++ +++.+|.+ +|+ ++.|++||+|+....
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 477888888888899999999999999876 67877765 354 689999999998765
No 94
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.37 E-value=0.099 Score=45.80 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=41.9
Q ss_pred hHHHHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe----------CC-----eEEecCEEEEecCh
Q 016211 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----------GK-----ETYSAGAVVLAVGI 218 (393)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----------~g-----~~~~ad~VI~a~p~ 218 (393)
+.+.+.+.+.+ .|++|++++.|++|..++ +++.+|.+ +| .+++||.||+|+..
T Consensus 121 ~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 121 FTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 55677777765 689999999999999876 56766665 22 67999999999985
No 95
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.34 E-value=0.076 Score=50.15 Aligned_cols=56 Identities=18% Similarity=0.152 Sum_probs=44.5
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEE-e-CCeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-C-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~-~-~g~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|. + +|+ +.||.||+|++...
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADAD-GRR-VATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SCE-EEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CEE-EEEEcCCCe-EEeCEEEEeeCccc
Confidence 33667788889999999999999999998754 333 467 6 466 99999999998643
No 96
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.23 E-value=0.093 Score=49.44 Aligned_cols=55 Identities=24% Similarity=0.274 Sum_probs=44.5
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.+.+.+++.|++|+++++|++|..++ +++. +.+ +|+++.||.||+|+....
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~-v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 209 EVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGAR-VELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEE-EEECCCeEEEcCEEEECcCCCc
Confidence 366778888888999999999999999776 3443 555 678899999999998654
No 97
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.16 E-value=0.093 Score=49.37 Aligned_cols=56 Identities=11% Similarity=0.190 Sum_probs=43.9
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
..+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|.+ +|+++.||.||+|+...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTD-GSL-TLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-cEE-EEEECCCcEEEcCEEEECCCCC
Confidence 33667788888889999999999999997653 323 3566 67789999999998654
No 98
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.11 E-value=0.14 Score=48.52 Aligned_cols=56 Identities=25% Similarity=0.319 Sum_probs=45.4
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+.+.+++.|++|+++++|++|..++ ++..|.++++++.||.||+|++...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGNE---RVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS---BEEEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcCC---cEEEEEECCCEEEcCEEEECcCCCc
Confidence 3366778888889999999999999998643 4656777778899999999987653
No 99
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.05 E-value=0.1 Score=46.96 Aligned_cols=55 Identities=16% Similarity=0.025 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++.|++++++++|++|..++ +++.+|.++++++.||.||+|+....
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDGRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTSCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCCCEEEeCEEEECCCCCC
Confidence 55666677777899999999999999887 44433667655899999999999754
No 100
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.00 E-value=0.11 Score=49.68 Aligned_cols=60 Identities=15% Similarity=0.141 Sum_probs=44.1
Q ss_pred HHHHHHHHHcC-CeEecCceeeeEEecCCCCeEEEEEe---CC-----eEEecCEEEEecChhhHHHHh
Q 016211 166 EPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 225 (393)
Q Consensus 166 ~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-----~~~~ad~VI~a~p~~~~~~Ll 225 (393)
.++...+++.| ++|++++.|++|..+++++++++|.. +| .++.|+.||+|+.+-...+||
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 34444445555 89999999999999764236888876 45 368899999999987666554
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=93.92 E-value=0.11 Score=50.73 Aligned_cols=54 Identities=19% Similarity=0.109 Sum_probs=44.5
Q ss_pred hHHHHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++ .|++| +++.|++|..++ +++.+|.+ +|+++.||.||+|+....
T Consensus 125 ~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 125 YREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 66778888877 48898 688999999877 56888888 577899999999999753
No 102
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.65 E-value=0.12 Score=50.72 Aligned_cols=54 Identities=20% Similarity=0.158 Sum_probs=44.3
Q ss_pred hHHHHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++ .|++| +++.|+.|..++ +++.+|.+ +|+++.||.||+|+....
T Consensus 126 ~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 126 YRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 66777777877 58898 688999999876 56878888 577899999999999753
No 103
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=93.62 E-value=0.16 Score=49.01 Aligned_cols=55 Identities=16% Similarity=0.165 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++++.+ .|++|..+++ +.+..|.+ +|++++||.||.|+....
T Consensus 167 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 167 VADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECCCcEEEeCEEEECCCCch
Confidence 6677888888889999999 8999998654 44556776 566899999999998865
No 104
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.62 E-value=0.13 Score=45.83 Aligned_cols=52 Identities=10% Similarity=0.057 Sum_probs=40.0
Q ss_pred HHHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe-C-----CeEEecCEEEEecChh
Q 016211 166 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-G-----KETYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-----g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+. |++|++++.|.+|..++ +++.+|++ + ++++.||.||++++..
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 4556666665 99999999999999876 44655655 2 3579999999999864
No 105
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=93.56 E-value=0.11 Score=48.84 Aligned_cols=56 Identities=25% Similarity=0.398 Sum_probs=44.5
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+.+.+++.|++|+++++|++|..++ ++..|.++|+++.||.||+|++...
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGDG---RVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECSS---BCCEEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEccC---cEEEEEECCCEEECCEEEECcCCCC
Confidence 3366777888888999999999999998653 3544667888899999999998643
No 106
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.40 E-value=0.17 Score=48.31 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=44.4
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeE-EecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET-YSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~-~~ad~VI~a~p~~~ 220 (393)
.-+.+.+.+.+++.|++|++++.|++|..+++ +.+ .|.+ +|++ +.||.||+|++...
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSD-KNL-SIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESST-TCE-EEEETTSCEEEEESEEEECCCBCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ceE-EEEECCCcEEEECCEEEECCCCCc
Confidence 33667788889999999999999999987653 323 3555 6777 99999999988643
No 107
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.32 E-value=0.16 Score=49.79 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=45.9
Q ss_pred HhHHHHHHHHHHcC-CeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.| ++|+.+++|++|..++ +++.+|.+ +|+ ++.|+.||+|+....
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 47788888888888 8999999999999876 56777653 465 689999999998854
No 108
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.32 E-value=0.2 Score=47.37 Aligned_cols=55 Identities=20% Similarity=0.246 Sum_probs=43.0
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC---eEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g---~~~~ad~VI~a~p~~ 219 (393)
..+.+.+.+.+++.|++|+++++|++|..++ +++. |.+ ++ +++.||.||+|++..
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~-v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKN--KQVT-VKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECS--SCEE-EEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEEE-EEEEeCCCcEEEECCEEEEeeCCc
Confidence 3366778888889999999999999999876 3354 443 33 579999999999864
No 109
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.30 E-value=0.19 Score=47.49 Aligned_cols=55 Identities=18% Similarity=0.153 Sum_probs=43.6
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCe-EEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~-~~~ad~VI~a~p~~ 219 (393)
..+.+.+.+.+++.|++|+++++|++|..+++ ++ .|.+ +|+ ++.||.||+|+...
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~-~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQ--GT-TLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETT--EE-EEEETTCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--eE-EEEEeCCcEEEEcCEEEECCCCC
Confidence 33567778888899999999999999997653 34 3566 677 89999999998754
No 110
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.24 E-value=0.2 Score=44.43 Aligned_cols=52 Identities=17% Similarity=0.334 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++|+++++|.+|..++ +++.+|.+ +|+ ++.||.||+|++..
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 346666778899999999999998765 44545554 454 68999999998654
No 111
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.24 E-value=0.17 Score=45.87 Aligned_cols=54 Identities=9% Similarity=0.027 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CC--eEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++|+++++|++|..++ +++.+|.+ +| +++.+|.||++++..
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 44566677777889999999999999875 45655655 56 579999999998854
No 112
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=93.18 E-value=0.18 Score=49.20 Aligned_cols=55 Identities=22% Similarity=0.160 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++.|++|+.+++|++|..++ +.+.+|++ +| .+++||.||.|+....
T Consensus 130 l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 130 FDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 66777888888899999999999999874 23445665 56 5799999999998875
No 113
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.13 E-value=0.2 Score=48.18 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCC---eEEEEEeCC---eEEecCEEEEecChhh-HHHHh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC---CISDVVCGK---ETYSAGAVVLAVGIST-LQELI 225 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~---~v~~v~~~g---~~~~ad~VI~a~p~~~-~~~Ll 225 (393)
+.+.|.+.+++.|++|+++++|++|+.+++ + .+.....++ .+++||.||.|...+. +.+.+
T Consensus 122 l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 122 LEPILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 667788888888999999999999998873 1 455222344 6899999999999875 45555
No 114
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.13 E-value=0.18 Score=48.84 Aligned_cols=55 Identities=15% Similarity=0.289 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEec------------------CCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~------------------~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++|++++.|++|..+ ++ +++..+..+|+++.||.||+|++..
T Consensus 194 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 194 MAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEEEEEcCCCEEEcCEEEECcCCc
Confidence 5667778888899999999999999873 22 4454233367889999999998764
No 115
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.02 E-value=0.25 Score=47.48 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=43.7
Q ss_pred hHHHHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++ .|++|+.+ .|++|..+++ +.+..|++ +|++++||.||.|...+.
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCCEEEcCEEEECCCcch
Confidence 66777888888 89999999 5999998754 44555666 567799999999998864
No 116
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=92.98 E-value=0.27 Score=46.39 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=42.9
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--C--Ce--EEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~--g~--~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|++|..++ +.+. |.+ + |+ ++.||.||+|+...
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGLH-VRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEEE-EEEeecCCCceeEEEcCEEEECCCcc
Confidence 3366777888888999999999999998765 3443 443 5 66 79999999998654
No 117
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=92.92 E-value=0.18 Score=47.73 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=44.5
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.|++|+.+++| +|..++ +++.+|.+ +++++.||.||+|+....
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 36678888887789999999999 998876 56777765 345688999999998765
No 118
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.90 E-value=0.18 Score=45.63 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++.|++|+++++|++|..+++ .+. |.++++++.||+||+|+....
T Consensus 90 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~--~~~-v~~~~g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 90 YAEYLQVVANHYELNIFENTVVTNISADDA--YYT-IATTTETYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSS--SEE-EEESSCCEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEECCC--eEE-EEeCCCEEEeCEEEECCCCCC
Confidence 445555666778999999999999998763 343 666544789999999999864
No 119
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=92.86 E-value=0.22 Score=45.47 Aligned_cols=57 Identities=14% Similarity=0.157 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+++.|++|+++++|++|+. + + .|++ +|++++||.||.|+.... ..+.+.
T Consensus 109 l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 109 LHDALVNRARALGVDISVNSEAVAADP-V--G---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEET-T--T---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 567788888888999999999999987 3 4 2455 677899999999999875 445444
No 120
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=92.81 E-value=0.23 Score=46.00 Aligned_cols=51 Identities=18% Similarity=0.204 Sum_probs=41.3
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
..+.+.+.+.+++.|++|+++++|++|. + + .|++ +|+++.||.||+|++..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--D--G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--T--T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--C---EEEECCCCEEEcCEEEECcCCC
Confidence 3356777888889999999999999998 3 3 2445 68889999999998865
No 121
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.80 E-value=0.29 Score=46.20 Aligned_cols=55 Identities=16% Similarity=0.329 Sum_probs=41.6
Q ss_pred hHhHHHHHHHH-HHcCCeEecCceeeeEEecCCCCeEEEEEe---CC--eEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSM-RTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l-~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+ ++.|++|+++++|++|..+++ ++. |.+ +| +++.||.||+|+...
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~--~~~-v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGD--SVS-LEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSS--SEE-EEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCC--eEE-EEEEcCCCceEEEECCEEEECCCcc
Confidence 33567788888 889999999999999987653 343 443 45 679999999998764
No 122
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=92.75 E-value=0.3 Score=44.79 Aligned_cols=60 Identities=10% Similarity=-0.007 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEecChhh-HHHHh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIST-LQELI 225 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VI~a~p~~~-~~~Ll 225 (393)
+.+.|.+.+.+.|++|+++++|++|..+++ +.+. |++ +|+ +++||.||.|...+. +.+.+
T Consensus 105 l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~-v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 105 VTRDLMEAREACGATTVYQAAEVRLHDLQG-ERPY-VTFERDGERLRLDCDYIAGCDGFHGISRQSI 169 (394)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSCE-EEEEETTEEEEEECSEEEECCCTTCSTGGGS
T ss_pred HHHHHHHHHHhcCCeEEeceeEEEEEEecC-CceE-EEEecCCcEEEEEeCEEEECCCCCcHHHHhc
Confidence 556777777778999999999999998642 2243 443 676 799999999999875 34444
No 123
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.50 E-value=0.063 Score=46.07 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=46.3
Q ss_pred CCCHHHHHHHHHHHHhhhhcCCCCCceeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEecccccc--CCCc-cccc
Q 016211 308 PLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITT--RHGS-WSQV 384 (393)
Q Consensus 308 ~~~~~e~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~L~laGd~~~~--~~ga-~s~~ 384 (393)
.....+..+.....+........ ..+....+++|..+.+...... +...+..+|||+|||++.. +++| .||.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~w~~a~~~~~~~~----~~~~~~~~~v~l~GDa~~g~gv~~A~~sG~ 317 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCTM-PAPVFSLAHRWLYARPAGAHEW----GALSDADLGIYVCGDWCLSGRVEGAWLSGQ 317 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSCC-CCCSEEEEEEEEEEEESSCCCC----SSEEETTTTEEECCGGGTTSSHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhhccCCc-CcchheeccceeecccccccCc----cceeeCCCCEEEEecccCCcCHHHHHHHHH
Confidence 34566666667777776664432 2555666778865544322111 1122456899999999875 5556 6898
Q ss_pred hhcc
Q 016211 385 TFKL 388 (393)
Q Consensus 385 ~a~~ 388 (393)
+||+
T Consensus 318 ~aA~ 321 (336)
T 3kkj_A 318 EAAR 321 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 124
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.50 E-value=0.34 Score=45.64 Aligned_cols=55 Identities=15% Similarity=0.250 Sum_probs=42.6
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|++|..++ +++. +.+ +| +++.||.||+|+...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGG--SQVT-VTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECS--SCEE-EEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC--CeEE-EEEEcCCceEEEEcCEEEECCCCC
Confidence 3356677888888999999999999998765 3343 443 46 679999999998754
No 125
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.29 E-value=0.23 Score=48.42 Aligned_cols=53 Identities=13% Similarity=0.178 Sum_probs=42.8
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
..+.+.+.+.+++.|++|+++++|++|..++ +. |++ +|+++.||.||+|++..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~---v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENG--AV---VRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--TE---EEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCC--CE---EEECCCCEEEcCEEEEccCCC
Confidence 3366778888899999999999999998765 32 444 67889999999998764
No 126
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.28 E-value=0.16 Score=48.99 Aligned_cols=56 Identities=20% Similarity=0.222 Sum_probs=42.6
Q ss_pred hHHHHHHHHHH-cCCeEecCceeeeEEecCCCC------eEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERC------CISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~------~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.+++ .|++|+.+++|++|..+++ + ++.+|.+ +|+ ++.|+.||+|+....
T Consensus 140 l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 140 VETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp --CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 55667777777 6899999999999998332 3 6777765 354 689999999998765
No 127
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.24 E-value=0.26 Score=43.34 Aligned_cols=48 Identities=13% Similarity=0.213 Sum_probs=37.5
Q ss_pred HHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEecChh
Q 016211 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VI~a~p~~ 219 (393)
+.+++.|++|+++++|.+|..++ +++.+|++ +|+ ++.||.||++++..
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred HHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 33456799999999999998776 45666655 464 78999999999864
No 128
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.22 E-value=0.21 Score=47.40 Aligned_cols=56 Identities=20% Similarity=0.227 Sum_probs=43.3
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C----CeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----KETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~----g~~~~ad~VI~a~p~~~ 220 (393)
.-+.+.+.+.+++.|++|++++.|.+|..++ +.+. |++ + |+++.||.||+|+....
T Consensus 226 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~-v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DGVY-VTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHHHHHHHGGGEEEEECSCEEEEEEEET--TEEE-EEEESSSCCSSCEEESCEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEECCEEEEEEEcC--CeEE-EEEeccCCCceEEEcCEEEECcCCCc
Confidence 3356777888888999999999999998765 3343 444 4 66789999999998653
No 129
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=92.11 E-value=0.36 Score=45.99 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCe---EEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~---~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+++.|++|+++++|++|+.+++ .+. |++ +++ +++||.||.|...+. +.+.+.
T Consensus 109 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 109 TESVLEEWALGRGAELLRGHTVRALTDEGD--HVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEEECSS--CEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--EEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 667778888888999999999999998874 465 554 443 799999999999875 455553
No 130
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=92.08 E-value=0.33 Score=45.84 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=43.5
Q ss_pred hhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe------CCeEEecCEEEEecChh
Q 016211 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~------~g~~~~ad~VI~a~p~~ 219 (393)
..-+.+.+.+.+++.|++|+++++|++|..+++ +.+. |.+ +++++.||.||+|+...
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~-v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKID-VSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCEE-EEEEETTSCCCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceEE-EEEEecCCCCceEEEcCEEEECcCCC
Confidence 343667788888899999999999999997653 2243 442 45789999999998764
No 131
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.03 E-value=0.32 Score=45.67 Aligned_cols=56 Identities=16% Similarity=0.191 Sum_probs=42.8
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCeEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+.+.+++.|++|++++.|++|..++ +++. |.+ +++++.+|.||+|++...
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEERE--DGVT-VTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeEE-EEEEeCCceeEEEcCEEEECcCCCc
Confidence 3366777888889999999999999998765 3343 443 246799999999987653
No 132
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.88 E-value=0.31 Score=46.24 Aligned_cols=56 Identities=20% Similarity=0.174 Sum_probs=42.4
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC-----eEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-----ETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g-----~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|.+|..+++ +.+. |++ ++ +++.||.||+|+...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~-v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDD-GKLL-VKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTT-SCEE-EEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CcEE-EEEecCCCCceeEEEcCEEEECcccc
Confidence 33667778888899999999999999998654 3343 444 32 278999999998764
No 133
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=91.87 E-value=0.38 Score=45.87 Aligned_cols=60 Identities=18% Similarity=0.146 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCe---EEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~---~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+++.|++|+++++|++|+.+++ .+. |++ +++ +++||.||.|...+. +.+.+.
T Consensus 108 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 108 TETHLEQWATGLGADIRRGHEVLSLTDDGA--GVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHTTCEEEETCEEEEEEEETT--EEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHCCCEEECCcEEEEEEEcCC--eEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 666777888888999999999999998873 465 554 442 799999999999875 455553
No 134
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.86 E-value=0.42 Score=45.40 Aligned_cols=55 Identities=20% Similarity=0.240 Sum_probs=42.7
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeC----C--eEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~----g--~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|+++++|.+|..++ +.+. |.+. | +++.||.||+|+...
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG--DGAK-VTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTSCCCEEEEESEEEECCCCE
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEEeC--CEEE-EEEEecCCCceEEEEcCEEEEeeCCc
Confidence 3366778888888999999999999999876 3343 4331 4 679999999998764
No 135
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=91.82 E-value=0.15 Score=48.57 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEecChhhH
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGISTL 221 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VI~a~p~~~~ 221 (393)
+.+.|.+.+++.|++|++++.|++|..+++++..+.|++ +| ++++||.||.|+.....
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 666777888888999999999999997521022234555 44 47899999999998753
No 136
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.70 E-value=0.38 Score=45.45 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=41.9
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEe--cCCCCeEEEEEe------CCeEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVC------GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~--~~~~~~v~~v~~------~g~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|+++++|++|.. ++ +.+ .|.+ +++++.||.||+|+...
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK--NVV-EIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT--TEE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC--CeE-EEEEEEcCCCCceEEECCEEEECCCCC
Confidence 33667788888899999999999999987 33 323 3444 24679999999998764
No 137
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=91.63 E-value=0.26 Score=45.49 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh-HHHHh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELI 225 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~-~~~Ll 225 (393)
+.+.|.+.+++ ++|+++++|++|+.++ +++. |++ +|++++||.||.|...+. +.+.+
T Consensus 129 l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 129 LQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHCG--GGEEESCCEEEEEEET--TEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHhCCc--CEEEECCEEEEEEecC--CcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 55666666655 8999999999999887 4465 555 688899999999998874 44444
No 138
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.63 E-value=0.55 Score=41.75 Aligned_cols=53 Identities=17% Similarity=0.118 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VI~a~p~~ 219 (393)
..+.+.+.+++.|++|++++.|.+|..++ ++.+|.+ +| +++.+|.||++++..
T Consensus 193 ~~~~l~~~l~~~gv~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 193 SVKELMKAHEEGRLEVLTPYELRRVEGDE---RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHTTSSEEETTEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhccccCCeEEecCCcceeEccCC---CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 45666777777799999999999998743 3444544 46 579999999998864
No 139
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.62 E-value=0.58 Score=44.20 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=42.9
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCC-eEEEEEeC----C----eEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-CISDVVCG----K----ETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~-~v~~v~~~----g----~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|++|..+++ + ++. |.+. | +++.+|.||+|++..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~-v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEVS-MVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSS-SEEEE-EEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEEE-EEEccCCCCcccceEEEcCEEEEeeccc
Confidence 33667778888899999999999999997654 3 333 5552 2 678999999998864
No 140
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=91.57 E-value=0.24 Score=45.84 Aligned_cols=52 Identities=12% Similarity=0.050 Sum_probs=40.9
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
..+.+.+.+.+++.|+++++++.|++|..+ .+ +..+|+++.||.||++++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~----~v--~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH----EI--VDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS----EE--EETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC----eE--EECCCCEEeeeEEEECCCCC
Confidence 336677888899999999999999999632 23 23378899999999998754
No 141
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.41 E-value=0.37 Score=42.76 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecCh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~ 218 (393)
+.+.+.+.+++.|.++++++.|++|..+++ +.+ .|.++++++.+|.||+|+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 69 LINNLKEQMAKFDQTICLEQAVESVEKQAD-GVF-KLVTNEETHYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHTTSCCEEECSCCEEEEEECTT-SCE-EEEESSEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHhCCcEEccCEEEEEEECCC-CcE-EEEECCCEEEeCEEEECCCC
Confidence 556677777778999999999999998763 234 36776555999999999987
No 142
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=91.24 E-value=0.14 Score=47.74 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CCeEEecCEEEEecCh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKETYSAGAVVLAVGI 218 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~~~~ad~VI~a~p~ 218 (393)
+.+.+.+.+++.|++|++++.|++|+.+ .+. +.. +++++.||.||++++.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~----~v~-~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD----KVI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS----EEE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC----eEE-EEecCCCceEEeeeEEEECCCC
Confidence 5567788889999999999999999632 232 221 1678999999998653
No 143
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=91.13 E-value=0.32 Score=47.59 Aligned_cols=54 Identities=17% Similarity=0.083 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++. |++|. +..|+.|..++ +++.+|.+ +|+++.||.||+|+....
T Consensus 119 l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 119 YSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 567777778774 88985 66999998876 56877877 578899999999998753
No 144
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=91.12 E-value=0.45 Score=46.90 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHc-CC-eEecCceeeeEEecCCC-CeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEER-CCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~-G~-~i~l~~~V~~I~~~~~~-~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
+...+.+.+++. |+ +|+.+++|++|..++++ +++.+|.+ +|+ ++.|+.||+|+....
T Consensus 153 ~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 153 YKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 556677777777 99 99999999999987620 17888764 354 689999999988754
No 145
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.04 E-value=0.44 Score=44.90 Aligned_cols=56 Identities=16% Similarity=0.239 Sum_probs=42.9
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEecChhh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIST 220 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+.+.+++.|++|+++++|.+|..++ +++. |.+ +| +++.||.||+|+....
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG--DGVK-LTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSS--SSEE-EEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC--CeEE-EEEEecCCCcceEEECCEEEECCCCCc
Confidence 3366778888889999999999999998765 3343 443 34 6799999999987653
No 146
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=91.01 E-value=0.22 Score=48.40 Aligned_cols=60 Identities=22% Similarity=0.175 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CC-eEEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ETYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-~~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+++.|++|+.+++|++|+.+++ .+. |++ +| ++++||.||.|...+. +.+.+.
T Consensus 150 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~--~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 150 TEALLAEHAREAGAEIPRGHEVTRLRQDAE--AVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHTEECCBSCEEEECCBCSS--CEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--eEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 667778888888999999999999998874 354 444 46 6899999999999875 455553
No 147
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.97 E-value=0.36 Score=42.93 Aligned_cols=52 Identities=17% Similarity=0.251 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|+++++++ |.+|..++ +.+. |.++|+++++|.||+|+...
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSS--KPFK-LFTDSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSS--SSEE-EECSSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEEE-EEECCcEEEcCEEEECCCCC
Confidence 55667777778899999997 99998766 3343 55688889999999999975
No 148
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.85 E-value=0.41 Score=46.13 Aligned_cols=55 Identities=31% Similarity=0.324 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHcCC--eEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|. +|+++++|+++..+++++++ .|++ +|+++.||.||+|+...
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~-~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLW-EVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEE-EEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEE-EEEEcCCCEEEeCEEEECCccc
Confidence 44556666667777 89999999999988652334 4666 57789999999999964
No 149
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=90.81 E-value=0.44 Score=46.02 Aligned_cols=55 Identities=24% Similarity=0.129 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHcCC--eEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|. +|+++++|+++..+++++++ .|++ +|+++.||.||+|+...
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w-~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRW-TVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEE-EEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEE-EEEECCCCEEEeCEEEECcCCC
Confidence 55556666677776 89999999999987653334 4666 57889999999999953
No 150
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.47 E-value=0.2 Score=49.89 Aligned_cols=55 Identities=11% Similarity=0.053 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++.|++|+++++|++|..++ ..+..+.. +++++.||.||+|+....
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARLP 624 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEEE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCCC
Confidence 34667788889999999999999998543 22221112 346799999999987653
No 151
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.42 E-value=0.54 Score=42.39 Aligned_cols=54 Identities=15% Similarity=0.229 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|.++++++.|++|..+++ +.+. |.+ +|+++.+|.||+|+...
T Consensus 76 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~-v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 76 LVESLWAQAERYNPDVVLNETVTKYTKLDD-GTFE-TRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHTTCCEEECSCCEEEEEECTT-SCEE-EEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ceEE-EEECCCcEEEeeEEEEccCCC
Confidence 556677777778899999999999998763 2343 666 56789999999999874
No 152
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.41 E-value=0.54 Score=41.83 Aligned_cols=53 Identities=17% Similarity=0.274 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.+.++++++.|++|..++ +.+. |.+ +|+++.+|.||+|+...
T Consensus 67 ~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~-v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 67 LVKGLVEQVAPFNPVYSLGERAETLEREG--DLFK-VTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHGGGCCEEEESCCEEEEEEET--TEEE-EEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEECC--CEEE-EEECCCCEEEeCEEEECCCCC
Confidence 55667777777789999999999999876 3343 566 46689999999999874
No 153
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=90.31 E-value=0.41 Score=43.87 Aligned_cols=45 Identities=13% Similarity=0.088 Sum_probs=36.2
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecCh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~ 218 (393)
.+.+++.|.+++++++|++|..++ ++ |++ +|+++.+|++|+|+..
T Consensus 69 ~~~~~~~~i~~~~~~~V~~id~~~--~~---v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 69 NDWYEKNNIKVITSEFATSIDPNN--KL---VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp HHHHHHTTCEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCE
T ss_pred HHHHHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEecCC
Confidence 344567799999999999998776 33 445 6788999999999986
No 154
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=90.15 E-value=0.63 Score=44.77 Aligned_cols=56 Identities=18% Similarity=0.090 Sum_probs=44.8
Q ss_pred hhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
..-+.+.+.+.+++.|.++++++.|.++...+ +.+. |.+ +++++.+|.|++|+.-.
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~-v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKIL-VEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEE-EEETTSCEEEESEEEECSCEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEE-EEEcCCCeEEEEEEEEccccc
Confidence 33366778888999999999999999999887 4454 555 57788999999998653
No 155
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=90.09 E-value=0.5 Score=45.05 Aligned_cols=57 Identities=12% Similarity=0.101 Sum_probs=41.0
Q ss_pred CchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC----eEEecCEEEEecCh
Q 016211 159 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK----ETYSAGAVVLAVGI 218 (393)
Q Consensus 159 G~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g----~~~~ad~VI~a~p~ 218 (393)
.+...+.+.+.+.+++.|++|++|++|++|..++ .+..+.. +| +++.||.||.|+..
T Consensus 269 ~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~---~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 269 MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQ---LLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSE---EEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CCCHHHHHHHHHHHHhcceeeecCceEEEEeCCc---eEEEEEecCcccceeeeccCEEEEccCC
Confidence 3445577778888999999999999999996432 1222222 33 46999999998763
No 156
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=90.06 E-value=0.57 Score=41.12 Aligned_cols=56 Identities=9% Similarity=0.168 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++++++++|+.|..+.+.+..+.|.+ +|+++.+|.||+|+...
T Consensus 58 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 58 LAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 556666777778999999999999986532011233666 56789999999999874
No 157
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=89.97 E-value=0.49 Score=46.75 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHc--CCeEecCceeeeEEecCCC-CeEEEEEe----CC--eEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTR--GCEFLDGRRVTDFIYDEER-CCISDVVC----GK--ETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~--G~~i~l~~~V~~I~~~~~~-~~v~~v~~----~g--~~~~ad~VI~a~p~~~ 220 (393)
+...|.+.+++. |++|+.++.|.+|..++++ |++.+|.+ +| .++.|++||+|+....
T Consensus 168 i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 168 YKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp HHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 667788888877 8999999999999987620 27888754 34 3589999999998644
No 158
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.93 E-value=0.4 Score=45.64 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=39.6
Q ss_pred HHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+++.|++|++++.|++|..++ ++.+|.+ +|+++.||.||+++....
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~~---~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGNE---KVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECSS---SCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEecCC---ceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 3366788899999999999998653 2545666 578899999999988754
No 159
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=89.90 E-value=0.53 Score=45.36 Aligned_cols=59 Identities=14% Similarity=0.204 Sum_probs=44.1
Q ss_pred HHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe-C---Ce--EE---ecCEEEEecChhhHHHHhhc
Q 016211 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TY---SAGAVVLAVGISTLQELIKN 227 (393)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~---~ad~VI~a~p~~~~~~Ll~~ 227 (393)
++.+.+.+ .+++|++++.|++|..++ +++.+|++ + |+ ++ .++.||+|+......+|+-.
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~ 268 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQ 268 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHH
Confidence 35555554 478999999999999976 67888887 3 53 33 78999999999766666533
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=89.88 E-value=0.61 Score=40.94 Aligned_cols=50 Identities=10% Similarity=0.242 Sum_probs=37.4
Q ss_pred HHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEecCh
Q 016211 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGI 218 (393)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VI~a~p~ 218 (393)
.+.+.+++ .|++|++++.|++|..++ +++.+|.+ +| .++.+|.||++++.
T Consensus 184 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 184 VLQDKLRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHTCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 45566666 589999999999998765 45655554 24 36899999999864
No 161
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.71 E-value=0.61 Score=43.95 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHcCCe--EecCceeeeEEecCCCCeEEEEEe-C---C--eEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCE--FLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~--i~l~~~V~~I~~~~~~~~v~~v~~-~---g--~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++ |++++.|++|..+++++++ .|++ + | +++.||+||+|+...
T Consensus 103 l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 103 LWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 444555556666776 9999999999987632233 3554 2 4 578999999999964
No 162
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=89.39 E-value=0.7 Score=42.37 Aligned_cols=58 Identities=12% Similarity=0.134 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+ .|++|+++++|++|..+++ ++. |++ +|++++||.||.|...+. +.+.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~--~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSE--TVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSS--CEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCC--EEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 334444433 3789999999999998873 465 555 677899999999999875 455544
No 163
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.39 E-value=0.96 Score=42.92 Aligned_cols=54 Identities=20% Similarity=0.117 Sum_probs=41.8
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CC--eEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g--~~~~ad~VI~a~p~~~ 220 (393)
-+.+.+.+.+++. ++|+++++|++|..++ +++. |.+ +| +++.||.||+|+....
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVE-VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEE-EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEE-EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 3666777777776 9999999999999876 3454 444 56 6799999999998643
No 164
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.39 E-value=0.58 Score=41.44 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C-----CeEEecCEEEEecChh
Q 016211 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-----KETYSAGAVVLAVGIS 219 (393)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-----g~~~~ad~VI~a~p~~ 219 (393)
...+.+++.|++++++++|.+|..++ + +.+|++ + ++++.||.||++++..
T Consensus 194 ~~~~~l~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 194 HSVENLHASKVNVLTPFVPAELIGED--K-IEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HHHHHHHHSSCEEETTEEEEEEECSS--S-CCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhcCCeEEEeCceeeEEecCC--c-eEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 34556788899999999999998765 3 333444 2 3578999999998854
No 165
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=89.22 E-value=0.94 Score=42.90 Aligned_cols=56 Identities=18% Similarity=0.204 Sum_probs=41.9
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C---Ce--EEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|.+|...++ +.+. |++ + |+ ++.||.||+|+...
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~~-v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT-NQLQ-VTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEE-EEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEE-EEEEeCCCCeeEEEECCEEEEcccCC
Confidence 33667778888899999999999999987543 3343 433 2 54 47899999998864
No 166
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=89.18 E-value=0.96 Score=40.58 Aligned_cols=57 Identities=16% Similarity=0.258 Sum_probs=43.7
Q ss_pred hHHHHHHHHHH-cCCeEecCceeeeEEecCC-----------------CCeEEEEEe-------CC--------eEEecC
Q 016211 164 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEE-----------------RCCISDVVC-------GK--------ETYSAG 210 (393)
Q Consensus 164 l~~~l~~~l~~-~G~~i~l~~~V~~I~~~~~-----------------~~~v~~v~~-------~g--------~~~~ad 210 (393)
+.+.|.+.+++ .|++|+.++.|.+|..+++ +.++.+|.+ +| .+++|+
T Consensus 162 ~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak 241 (344)
T 3jsk_A 162 FTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAP 241 (344)
T ss_dssp HHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECS
T ss_pred HHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcC
Confidence 55777777777 4899999999999998762 126777765 12 479999
Q ss_pred EEEEecChhh
Q 016211 211 AVVLAVGIST 220 (393)
Q Consensus 211 ~VI~a~p~~~ 220 (393)
.||.|+....
T Consensus 242 ~VV~ATG~~s 251 (344)
T 3jsk_A 242 VIISTTGHDG 251 (344)
T ss_dssp EEEECCCSSS
T ss_pred EEEECCCCCc
Confidence 9999998764
No 167
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.16 E-value=0.65 Score=43.46 Aligned_cols=54 Identities=17% Similarity=-0.085 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C---Ce---EEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE---TYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~---~~~ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++.+.+|++++.|++|..++ +.+. |++ + |+ ++.||+||+|+....
T Consensus 117 l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~~-V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 117 IQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSWV-VTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHGGGGGGEECSEEEEEEEEET--TEEE-EEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeEE-EEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 44445555555567899999999998876 4343 444 3 65 799999999999743
No 168
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=89.13 E-value=0.61 Score=43.64 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=43.8
Q ss_pred chhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 160 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 160 ~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+...+.+.+.+.+++. +++++++.|.+|..++ ++..+..+|+++.||.||+|+...
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCc
Confidence 3444666777778887 9999999999998654 354566788899999999998764
No 169
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=89.11 E-value=1 Score=39.45 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=37.3
Q ss_pred HHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChh
Q 016211 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~ 219 (393)
.+.+.+.+ .|++|++++.|++|..++ +++.+|.+ +|+ ++.||.||++++..
T Consensus 183 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 183 ITLEHAKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHHHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 35555654 689999999999998774 34544544 454 68999999998754
No 170
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=89.07 E-value=0.74 Score=41.79 Aligned_cols=60 Identities=10% Similarity=0.052 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEecChhh-HHHHh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIST-LQELI 225 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VI~a~p~~~-~~~Ll 225 (393)
+.+.|.+.+++.|++++++++|+.+..++ +++.++.. +| .+++||.||-|...+. +.+.+
T Consensus 104 ~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 45567777788899999999999999887 55665554 44 3689999999998875 34444
No 171
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=88.82 E-value=0.67 Score=44.69 Aligned_cols=55 Identities=16% Similarity=0.114 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHcCC--eEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|. +|+++++|+++..+++++++ .|++ +|++++||.||+|+...
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w-~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLW-EVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEE-EEEETTTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEE-EEEECCCCEEEeCEEEECcCCC
Confidence 44555555666675 89999999999987642333 4666 67889999999999964
No 172
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=88.65 E-value=1.3 Score=39.44 Aligned_cols=57 Identities=11% Similarity=0.216 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHc-CCeEecCceeeeEEecCCC--C--eEEEEEe---------------CCeEEec--------------
Q 016211 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEER--C--CISDVVC---------------GKETYSA-------------- 209 (393)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~--~--~v~~v~~---------------~g~~~~a-------------- 209 (393)
+.+.|.+.+.+. |++|+.+++|.+|..+++. + ++.+|.+ ++.++.|
T Consensus 148 ~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~ 227 (326)
T 2gjc_A 148 FISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQK 227 (326)
T ss_dssp HHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTT
T ss_pred HHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccccccc
Confidence 567777777775 8899999999999987421 3 6888765 2357899
Q ss_pred -CEEEEecChhh
Q 016211 210 -GAVVLAVGIST 220 (393)
Q Consensus 210 -d~VI~a~p~~~ 220 (393)
|.||.|+....
T Consensus 228 ~~~VV~ATG~~~ 239 (326)
T 2gjc_A 228 HGVILSTTGHDG 239 (326)
T ss_dssp CCEEEECCCCC-
T ss_pred CCEEEECcCCCc
Confidence 99999998763
No 173
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=88.49 E-value=1.6 Score=40.87 Aligned_cols=43 Identities=21% Similarity=0.106 Sum_probs=33.0
Q ss_pred cCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhh
Q 016211 175 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 220 (393)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~ 220 (393)
.|++|++++.|++|..++ +.+. |++ +|+ ++.||.||+|+....
T Consensus 329 ~~v~i~~~~~v~~v~~~~--~~~~-v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA--QGIE-LALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp CCSEEETTEEEEEEEEET--TEEE-EEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred CCeEEEeCCEEEEEEecC--CEEE-EEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 588999999999999876 3343 444 454 489999999998753
No 174
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=87.81 E-value=1.1 Score=39.37 Aligned_cols=52 Identities=19% Similarity=0.342 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|.++++ +.|.+|..++ +.+. |.+ +|+++.+|.||+|+...
T Consensus 61 ~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~-v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 61 FMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SHFV-ILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHHTTSCEEEC-SCEEEEEEET--TEEE-EEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CEEE-EEEcCCCEEECCEEEECCCCC
Confidence 556666667778899998 7999999876 4343 544 67789999999999864
No 175
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=87.80 E-value=0.93 Score=42.24 Aligned_cols=50 Identities=8% Similarity=-0.028 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--C-----CeEEecCEEEEecC
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G-----KETYSAGAVVLAVG 217 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~-----g~~~~ad~VI~a~p 217 (393)
+.+.+.+.+++.|+++++++.|++|..+ ++..... + ++++.+|.||++++
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~----~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN----KMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT----EEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC----eEEEEecccCCccccceEEEEeEEEEcCC
Confidence 5566778888999999999999999743 2321111 2 56789999999865
No 176
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=87.54 E-value=0.71 Score=44.53 Aligned_cols=52 Identities=21% Similarity=0.335 Sum_probs=40.2
Q ss_pred HcCCeEecCceeeeEEecCCCCeEEEEEe-C---Ce--EEecC-EEEEecChhhHHHHhh
Q 016211 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAG-AVVLAVGISTLQELIK 226 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~~ad-~VI~a~p~~~~~~Ll~ 226 (393)
+.|++|++++.|++|..+++ +++++|.+ + |+ ++.|+ .||+|+..-...+|+.
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~ 279 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLM 279 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhh
Confidence 35789999999999998763 46888876 2 53 68898 8999999865555553
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=87.24 E-value=0.99 Score=43.20 Aligned_cols=55 Identities=7% Similarity=0.165 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCC-CCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~-~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++++.+++|++|..+.+ ++.+ .|.+ +|+++.+|.||+|+...
T Consensus 269 l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~-~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 269 LAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLH-QIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceE-EEEECCCCEEEcCEEEECCCCC
Confidence 556677777788999999999999986421 1233 3666 57789999999999974
No 178
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=86.89 E-value=1.5 Score=38.89 Aligned_cols=48 Identities=13% Similarity=0.176 Sum_probs=35.3
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VI~a~p~~ 219 (393)
+++.|++|++++.|.+|..+++++++.+|.+ +| +++.||.||++++..
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 4567899999999999987652114544544 34 578999999998764
No 179
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=86.72 E-value=0.88 Score=44.61 Aligned_cols=52 Identities=13% Similarity=0.159 Sum_probs=40.2
Q ss_pred CCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChhhHHHHhhc
Q 016211 176 GCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQELIKN 227 (393)
Q Consensus 176 G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~~~~~Ll~~ 227 (393)
|++|++++.|++|..+++++++.+|++ +|+ ++.||.||+++..-...++|..
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~ 331 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVN 331 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHT
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHh
Confidence 789999999999998753246778776 243 6889999999998776666543
No 180
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=86.70 E-value=0.54 Score=43.15 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.|.+.++ +++|+++++|++|..+++ ++. |++ +|++++||.||.|.....
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~~--~v~-v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGKK--KWT-LTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECSS--SEE-EEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECCC--EEE-EEECCCcEEecCEEEECCCcch
Confidence 3344444332 368999999999998773 464 565 677899999999999865
No 181
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.47 E-value=1.1 Score=39.33 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|+++++ +.|.+|..++ +.+. |.+ +|+++.+|.||+|+...
T Consensus 72 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~-v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 72 MIKVFNKHIEKYEVPVLL-DIVEKIENRG--DEFV-VKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHTTTCCEEE-SCEEEEEEC----CEE-EEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHcCCEEEE-EEEEEEEecC--CEEE-EEECCCCEEEcCEEEECcCCC
Confidence 556677777778999999 9999999876 3343 566 46889999999999876
No 182
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=86.40 E-value=1.3 Score=39.18 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe----CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|+++++++ |.+|..++ +.+. +.+ ++.++.+|.||+|+...
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSS--KPFK-LWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEE-EEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEE-EEEEecCCCcEEEeCEEEECcCCC
Confidence 56677777888899999999 99998876 4454 544 46789999999998874
No 183
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=86.36 E-value=0.87 Score=42.75 Aligned_cols=51 Identities=22% Similarity=0.302 Sum_probs=40.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++|+++++|++|.. + + +. +.. +| +++.||.||+|++..
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~-v~-v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 214 LTAPVAESLKKLGIALHLGHSVEGYEN-G--C-LL-ANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp HHHHHHHHHHHHTCEEETTCEEEEEET-T--E-EE-EECSSSCCCEECCSCEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEe-C--C-EE-EEECCCceEEEECCEEEECcCCC
Confidence 566778888889999999999999986 3 3 43 443 35 579999999999864
No 184
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=86.24 E-value=1.3 Score=42.59 Aligned_cols=55 Identities=16% Similarity=0.027 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHcC--CeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRG--CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G--~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+...+++.+ .+|+++++|+++..+++++.+ .|++ +|++++||.||+|+...
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w-~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTW-TVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEE-EEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeE-EEEECCCCEEEeCEEEECcCCC
Confidence 3333433344444 579999999999987642334 4666 57789999999999864
No 185
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=86.21 E-value=1.8 Score=38.26 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=36.2
Q ss_pred HHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecChh
Q 016211 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~~ 219 (393)
.+.+.+.+ .|++|++++.|++|..++ ++.+|.+ +|+ ++.||.||+|++..
T Consensus 192 ~~~~~l~~~~gv~i~~~~~v~~i~~~~---~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 192 VAQARAFANPKMKFIWDTAVEEIQGAD---SVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESS---SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHhcCCceEecCCceEEEccCC---cEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 34555554 589999999999998643 3544554 454 78999999998653
No 186
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=86.10 E-value=0.89 Score=42.42 Aligned_cols=52 Identities=12% Similarity=0.143 Sum_probs=40.5
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|+++.. ..+ +..+|+++.||.||+|+...
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~----~~v--~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING----NEI--TFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET----TEE--EETTSCEEECSEEEECCCEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC----Cee--eecCCeEEeeeeEEEEecee
Confidence 33667788889999999999999998862 222 23368899999999998754
No 187
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=86.07 E-value=1.4 Score=38.70 Aligned_cols=52 Identities=13% Similarity=0.145 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|+++++ +.|.+|..++ +.+. |.++++++.+|.||+|+...
T Consensus 74 ~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~-v~~~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 74 LAKLFADHAANYAKIREG-VEVRSIKKTQ--GGFD-IETNDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHTTSEEEET-CCEEEEEEET--TEEE-EEESSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CEEE-EEECCCEEEeCEEEECCCCC
Confidence 556666777778899988 7899998876 3344 66677789999999999864
No 188
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=86.00 E-value=1.5 Score=40.39 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=42.4
Q ss_pred hHHHHHHHHHH-cC-CeEecCceeeeEEecCCCCeEEEEEe-C---C--eEEecCEEEEecChhh-HHHHh
Q 016211 164 IFEPWMDSMRT-RG-CEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELI 225 (393)
Q Consensus 164 l~~~l~~~l~~-~G-~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g--~~~~ad~VI~a~p~~~-~~~Ll 225 (393)
+.+.|.+.+++ .| ++|+++++|++|.. ++ ++. |++ + | ++++||.||.|..... +.+.+
T Consensus 109 l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~--~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 109 LQMILLAAVRERLGQQAVRTGLGVERIEE-RD--GRV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET--TEE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEECCEEEEEec-CC--ccE-EEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 55667777765 36 48999999999998 53 354 433 3 6 5799999999999875 45544
No 189
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=85.63 E-value=1.1 Score=42.11 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEE--EEEe-CCe----EEecCEEEEecCh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCIS--DVVC-GKE----TYSAGAVVLAVGI 218 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~--~v~~-~g~----~~~ad~VI~a~p~ 218 (393)
+.+.+....+..|.+|+++++|++|..++++++.+ .|++ +|+ ++.||.||+|+..
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 33444444455678999999999999862212332 2444 443 7999999999986
No 190
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=85.43 E-value=1.6 Score=38.28 Aligned_cols=56 Identities=18% Similarity=0.391 Sum_probs=38.9
Q ss_pred HHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe-C---Ce--EEecCEEEEecChhhHHHHhh
Q 016211 168 WMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGISTLQELIK 226 (393)
Q Consensus 168 l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g~--~~~ad~VI~a~p~~~~~~Ll~ 226 (393)
+.+.+.+ .|+++++++.|++|..++ + +..|++ + |+ ++.+|.||++++...-..++.
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~ 257 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDK--V-VKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAK 257 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESS--S-EEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHH
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccC--c-eeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHh
Confidence 4444544 489999999999998764 2 444554 3 64 789999999987654334443
No 191
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.15 E-value=1.6 Score=39.64 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++|++++.|++|. . .. |.+ +|+ +.||.||+|+...
T Consensus 185 ~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~~---v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 185 LSNMIKDMLEETGVKFFLNSELLEAN--E--EG---VLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHHHHHHTTEEEECSCCEEEEC--S--SE---EEETTEE-EECSCEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE--e--eE---EEECCCE-EEcCEEEECcCCC
Confidence 56777888889999999999999997 2 22 445 566 9999999998754
No 192
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=84.58 E-value=0.69 Score=43.03 Aligned_cols=51 Identities=8% Similarity=-0.051 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C--CeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G--KETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~--g~~~~ad~VI~a~p~~ 219 (393)
..+.+.+.++++|+++++|+.|++|+. +++. +.. + ++++.||.||++++..
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~~----~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP----DKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS----SEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEeC----CceE-EEeeCCCceEeecceEEEeccCC
Confidence 345566778889999999999999963 2343 333 3 3579999999987654
No 193
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=83.79 E-value=1.5 Score=39.49 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHcC-CeEecCceeeeEEecCCCCeEEEEEe-CCeEEe-cCEEEEecChh
Q 016211 164 IFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYS-AGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G-~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~-ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.| ++|++++.|.+|..++ +.+ .|.+ +|+++. +|.||+++...
T Consensus 216 ~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 216 TRQRLGNVIKQGARIEMNVHYTVKDIDFNN--GQY-HISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHHHHTTCCEEEECSCCEEEEEEET--TEE-EEEESSSCCEEESSCCEECCCBC
T ss_pred HHHHHHHHHhhCCcEEEecCcEEEEEEecC--Cce-EEEecCCeEeccCCceEEeeccC
Confidence 4466677777886 9999999999998655 334 3555 676664 69999998754
No 194
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=83.57 E-value=2.5 Score=37.08 Aligned_cols=52 Identities=13% Similarity=0.203 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|.++++++ |+.|..++ +.+. |..+|+++.+|.||+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 64 LMERMHEHATKFETEIIFDH-INKVDLQN--RPFR-LNGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEECSS--SSEE-EEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHCCCEEEEee-eeEEEecC--CEEE-EEeCCCEEEcCEEEECCCCC
Confidence 55666667777899999997 99998766 3354 44477889999999999864
No 195
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=83.42 E-value=0.41 Score=44.00 Aligned_cols=45 Identities=20% Similarity=0.130 Sum_probs=35.0
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+++.|++|++++.|..++.++++ .. |.+ +|+++.||.||+++|..
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~--~~-v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEA--MT-VETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTT--TE-EEETTSCEEECSEEEECCCEE
T ss_pred HHhcCcEEEeCceEEEEEecccc--eE-EEcCCCcEEEeeEEEEecCcC
Confidence 35678899999999999987642 32 555 68899999999987643
No 196
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=82.49 E-value=1.9 Score=37.26 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=42.9
Q ss_pred ceEEecCCchhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 152 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 152 ~~~~~~gG~~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
.+.+...+... +.+.+.+.+++.|++|+. ++|.+|..+ + .|.+ +|+++.+|.||++++..
T Consensus 165 ~v~~v~~~~~~-~~~~~~~~l~~~gv~i~~-~~v~~i~~~---~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 165 ETTFFTNGIVE-PDADQHALLAARGVRVET-TRIREIAGH---A---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp EEEEECTTTCC-CCHHHHHHHHHTTCEEEC-SCEEEEETT---E---EEEETTSCEEEESEEEECCEEE
T ss_pred cEEEEECCCCC-CCHHHHHHHHHCCcEEEc-ceeeeeecC---C---eEEeCCCCEEEEEEEEEccCcc
Confidence 45555433333 556678888899999995 999999743 2 2455 68889999999998654
No 197
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=82.11 E-value=2.9 Score=41.11 Aligned_cols=63 Identities=25% Similarity=0.300 Sum_probs=46.5
Q ss_pred HhHHHHHHHHHHcCC--eEecCceeeeEEecCC--CCeEEEEEe-------CC--eEEecCEEEEecChhh-HHHHhh
Q 016211 163 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEE--RCCISDVVC-------GK--ETYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~--~i~l~~~V~~I~~~~~--~~~v~~v~~-------~g--~~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
.+.+.|.+.+++.|+ +|+++++|++|+.+++ +..+. |++ +| ++++||.||.|...+. +.+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~-v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT-VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE-EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE-EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 366778888888887 9999999999998752 11243 432 35 5799999999999875 456554
No 198
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=81.43 E-value=2.7 Score=40.70 Aligned_cols=53 Identities=17% Similarity=0.201 Sum_probs=40.3
Q ss_pred HcCCeEecCceeeeEEecCC--CCeEEEEEe---CCe--EEecC-EEEEecChhhHHHHhh
Q 016211 174 TRGCEFLDGRRVTDFIYDEE--RCCISDVVC---GKE--TYSAG-AVVLAVGISTLQELIK 226 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~--~~~v~~v~~---~g~--~~~ad-~VI~a~p~~~~~~Ll~ 226 (393)
+.+.+|++++.|++|..+++ +++++||.. +|+ ++.|+ .||++..+-...+||-
T Consensus 239 r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~ 299 (583)
T 3qvp_A 239 RPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILE 299 (583)
T ss_dssp CTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred CCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHH
Confidence 45689999999999999731 268889876 353 57786 6999998887777653
No 199
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=81.32 E-value=3.1 Score=40.00 Aligned_cols=57 Identities=12% Similarity=0.178 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C---C--eEEecCEEEEecChhh-HHHHhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELIK 226 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~---g--~~~~ad~VI~a~p~~~-~~~Ll~ 226 (393)
+.+.|.+.+++. |+++++|++|+.+++ +|. |++ + | ++++||.||.|..... +.+.+.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~--~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDD--HVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSS--CEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCC--EEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 445666666655 999999999998874 465 333 3 5 4799999999999875 455554
No 200
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=81.03 E-value=3.2 Score=36.50 Aligned_cols=54 Identities=20% Similarity=0.132 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEec--CCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~--~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++++. +.|.+|..+ ++ +.+..+..+|+++.+|.||+|+...
T Consensus 67 ~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 67 LAQRMHQQAEKFGAKVEM-DEVQGVQHDATSH-PYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCEEEEEECTTSS-SCCEEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEe-eeEEEEEeccCCC-ceEEEEECCCCEEEeCEEEECcCCC
Confidence 556667777788999987 689999876 42 2133223467889999999999874
No 201
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=81.01 E-value=2.8 Score=41.41 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=37.7
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCC--eEEecCEEEEecChhh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--ETYSAGAVVLAVGIST 220 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g--~~~~ad~VI~a~p~~~ 220 (393)
..+.+.+++.|++|++++.|++|. + +.+. +..+| +++.||.||+++....
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~--~~v~-~~~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--D--DGLH-VVINGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--T--TEEE-EEETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--C--CeEE-EecCCeEEEEeCCEEEECCCccc
Confidence 345667888999999999999997 2 2243 33567 5799999999988653
No 202
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=80.88 E-value=1.8 Score=39.47 Aligned_cols=49 Identities=10% Similarity=0.028 Sum_probs=38.0
Q ss_pred cCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh-HHHHh
Q 016211 175 RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELI 225 (393)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~-~~~Ll 225 (393)
.+.+|+++++|++++..++ +++. |++ +|++++||.||-|-..+. +.+.+
T Consensus 122 ~~~~v~~~~~v~~~~~~~~-~~v~-v~~~dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIEN-GGIK-IFFADGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp CTTTEECSCCEEEEEECTT-SCEE-EEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred ccceEEEEEEEEeeeEcCC-CeEE-EEECCCCEEEeeEEEECCCCCcchHHHh
Confidence 4668999999999998765 4565 555 789999999999998875 44443
No 203
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.39 E-value=2.5 Score=38.29 Aligned_cols=43 Identities=23% Similarity=0.206 Sum_probs=34.1
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+++.|+++++++.|+.|..++ .. |..+|+++.+|++|+|+...
T Consensus 70 ~~~~~v~~~~g~~v~~id~~~--~~---V~~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 70 YRKRGIEIRLAEEAKLIDRGR--KV---VITEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp HHHHTEEEECSCCEEEEETTT--TE---EEESSCEEECSEEEECCCEE
T ss_pred HHhCCcEEEECCEEEEEECCC--CE---EEECCcEEECCEEEECCCCC
Confidence 456689999999999998654 33 33677889999999999863
No 204
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=79.74 E-value=3 Score=36.97 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEE-Ee-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDV-VC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v-~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|+++++++ |.+|.. + +.+. | .+ +|+++.+|.||+|+...
T Consensus 73 ~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~~-v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 73 LMDEMREQALRFGADLRMED-VESVSL-H--GPLK-SVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEEC-S--SSSE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEee-EEEEEe-C--CcEE-EEEeCCCCEEEeCEEEECCCCC
Confidence 55666666777899999998 999987 3 2333 4 55 57789999999999874
No 205
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=79.60 E-value=2.2 Score=41.51 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=40.1
Q ss_pred HcCCeEecCceeeeEEecCCC--CeEEEEEe---CCe--EEec-CEEEEecChhhHHHHhhc
Q 016211 174 TRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELIKN 227 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~--~~v~~v~~---~g~--~~~a-d~VI~a~p~~~~~~Ll~~ 227 (393)
+.+.+|++++.|++|..++++ +++.+|.. +|+ ++.| +.||+|+..-...+||-.
T Consensus 243 ~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~ 304 (587)
T 1gpe_A 243 RSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEY 304 (587)
T ss_dssp CTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHH
T ss_pred CCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHh
Confidence 457899999999999987421 36888765 464 5778 889999998766666543
No 206
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=79.60 E-value=2.6 Score=39.16 Aligned_cols=45 Identities=24% Similarity=0.303 Sum_probs=35.5
Q ss_pred HHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+++.|+++++++.|+.|..++ .. |.+ +|+++.+|.+|+|+...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDR--QQ---VILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEcCCCC
Confidence 34466789999999999998765 33 445 57789999999999874
No 207
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=79.25 E-value=2.3 Score=40.73 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=41.0
Q ss_pred HHHcCCeEecCceeeeEEecCC-CCeEEEEEe---CCe--EE---ecCEEEEecChhhHHHHhhc
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC---GKE--TY---SAGAVVLAVGISTLQELIKN 227 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~-~~~v~~v~~---~g~--~~---~ad~VI~a~p~~~~~~Ll~~ 227 (393)
+++.|.+|++++.|++|..+++ ++++++|.. +|+ ++ .++.||+|+..-...+||-.
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~ 268 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLL 268 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHH
Confidence 3456789999999999998762 137888876 354 34 46899999998766666543
No 208
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=78.81 E-value=3.3 Score=39.55 Aligned_cols=50 Identities=10% Similarity=0.259 Sum_probs=37.3
Q ss_pred HHHHHHHH-cCCeEecCceeeeEEecCCCCeEEEEEe----CCe--EEecCEEEEecCh
Q 016211 167 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 218 (393)
Q Consensus 167 ~l~~~l~~-~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g~--~~~ad~VI~a~p~ 218 (393)
.+.+.+++ .|++|++++.|++|..++ +++.+|.+ +|+ ++.+|.||++++.
T Consensus 395 ~l~~~l~~~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 395 VLQDKVRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHTTCTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 35556666 588999999999998765 45655654 253 6899999999874
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=78.07 E-value=3.9 Score=38.34 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=32.3
Q ss_pred cCCeEecCceeeeEEecCCCC-eEEEEEe----------------CC--eEEecCEEEEecChh
Q 016211 175 RGCEFLDGRRVTDFIYDEERC-CISDVVC----------------GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~-~v~~v~~----------------~g--~~~~ad~VI~a~p~~ 219 (393)
.|++|++++.+.+|..+++ + ++.+|++ +| +++.||.||.++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 7899999999999986532 3 4544443 23 578999999998754
No 210
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=77.80 E-value=5.4 Score=37.96 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=40.0
Q ss_pred hHhHHHHHHHHHHcCCeEecCceeeeEEecCCC--CeEEEEEe---CC-e--EEecCEEEEecChh
Q 016211 162 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GK-E--TYSAGAVVLAVGIS 219 (393)
Q Consensus 162 ~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~--~~v~~v~~---~g-~--~~~ad~VI~a~p~~ 219 (393)
.-+.+.+.+.+++.|++|++++.|++|...+++ +.+. |.. +| + ++.||.||+|+...
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEE-EEEEESSSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEE-EEEEECCCcEEEEEECCEEEEecCCc
Confidence 336677778888999999999999988764320 2232 322 44 2 56899999998764
No 211
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=77.50 E-value=3.7 Score=35.32 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++. +.++. ++.|++|..++ +.+ .|.+ +|+++.+|.||+|+...
T Consensus 58 ~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~--~~~-~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 58 IIAEARRQIERYPTIHWV-EGRVTDAKGSF--GEF-IVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHTTCTTEEEE-ESCEEEEEEET--TEE-EEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHhcCCeEEE-EeEEEEEEEcC--CeE-EEEECCCCEEEcCEEEECCCCC
Confidence 555666666665 45554 56999999876 334 3666 57789999999999874
No 212
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=77.17 E-value=2.8 Score=38.54 Aligned_cols=43 Identities=26% Similarity=0.285 Sum_probs=34.6
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+++.|.+++++++|++|..++ .. |.+ +|+++.+|++|+|+...
T Consensus 67 ~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDVQT--RT---ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHTTCEEEESCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEccCCc
Confidence 356789999999999998765 33 445 67889999999999864
No 213
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=77.13 E-value=2.2 Score=41.20 Aligned_cols=53 Identities=21% Similarity=0.147 Sum_probs=39.1
Q ss_pred HcCCeEecCceeeeEEec---CCCCeEEEEEe--C-C-e--EEec-CEEEEecChhhHHHHhh
Q 016211 174 TRGCEFLDGRRVTDFIYD---EERCCISDVVC--G-K-E--TYSA-GAVVLAVGISTLQELIK 226 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~---~~~~~v~~v~~--~-g-~--~~~a-d~VI~a~p~~~~~~Ll~ 226 (393)
+.+.+|++++.|++|..+ ++.++++||.. + | + ++.| +.||++..+-...+||-
T Consensus 220 r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~ 282 (566)
T 3fim_B 220 RPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQ 282 (566)
T ss_dssp CTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHH
T ss_pred CCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHH
Confidence 456899999999999987 21146888876 2 4 3 5677 57999988877777653
No 214
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=76.99 E-value=3.5 Score=39.92 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=39.4
Q ss_pred cCCeEecCceeeeEEecCCCCeEEEEEe--C-Ce--EEec-CEEEEecChhhHHHHhh
Q 016211 175 RGCEFLDGRRVTDFIYDEERCCISDVVC--G-KE--TYSA-GAVVLAVGISTLQELIK 226 (393)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~-g~--~~~a-d~VI~a~p~~~~~~Ll~ 226 (393)
.+.+|++++.|++|..+++++++++|.. + |+ ++.| +.||+++..-...+||-
T Consensus 219 ~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~ 276 (577)
T 3q9t_A 219 PNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLM 276 (577)
T ss_dssp TTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHH
Confidence 4789999999999999842268888876 3 54 4677 46999988877766643
No 215
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=76.54 E-value=3.7 Score=42.50 Aligned_cols=50 Identities=22% Similarity=0.322 Sum_probs=37.4
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C-------C--eEEecCEEEEecChh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-------K--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-------g--~~~~ad~VI~a~p~~ 219 (393)
.+.+++.|++|++++.|.+|..+++ +++.+|++ + | +++.||.||+++...
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~ 382 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGFN 382 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCcC
Confidence 5667888999999999999987411 34555544 2 4 579999999998753
No 216
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=75.96 E-value=3.1 Score=36.82 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=33.2
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe----CC--eEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g--~~~~ad~VI~a~p~~ 219 (393)
+++.|++|++++.|.+|..++ + +.+|.+ +| +++.||.||++++..
T Consensus 201 ~~~~gV~v~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 201 RNNDKIRFLTNHTVVAVDGDT--T-VTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp HHCTTEEEECSEEEEEEECSS--S-CCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred hccCCcEEEeCceeEEEecCC--c-EeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 356799999999999998654 2 223333 34 579999999998754
No 217
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=75.07 E-value=5 Score=34.91 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.+...+.+.+.+.....+..|..+...++ +... |.+ +|+++.+|+||+|+...
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 62 FKEIGLNEVMKYPSVHYYEKTVVMITKQST-GLFE-IVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp HHHHHHHHHTTSTTEEEEECCEEEEEECTT-SCEE-EEETTCCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHhcCCEEEEeeEEEEeeecCC-CcEE-EEECCCCEEEeCEEEEccCCc
Confidence 334444555555665556666777766554 3343 445 68899999999999864
No 218
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=75.07 E-value=4.1 Score=35.53 Aligned_cols=50 Identities=6% Similarity=0.084 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEec
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAV 216 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~ 216 (393)
+.+.+.+.+++.|.+++.++ |..+..++ +++..|.+ +|+++.+|.||+++
T Consensus 182 ~~~~~~~~l~~~g~~~~~~~-v~~~~~~~--~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 182 LSQTIMDELSNKNIPVITES-IRTLQGEG--GYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CCHHHHHHHHTTTCCEECSC-EEEEESGG--GCCCEEEETTSCEECCCEEEECC
T ss_pred chhhhhhhhhccceeEeeee-EEEeecCC--Ceeeeeeccccceeeecceeeee
Confidence 44567778888899998765 77787665 55767777 57889899887754
No 219
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=74.54 E-value=2.6 Score=42.13 Aligned_cols=49 Identities=12% Similarity=0.097 Sum_probs=35.5
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CC-eE------------------EecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ET------------------YSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g-~~------------------~~ad~VI~a~p~~ 219 (393)
..+.+.+++.|++|++++.|++|..++ +. +.. ++ ++ +.||.||+|++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~~----v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPGR----ME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETTE----EE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECCe----EE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 456677788899999999999997422 32 222 33 33 8999999998864
No 220
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=72.60 E-value=5.6 Score=37.23 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe---CCe--EEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~---~g~--~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+ .++|+++++|++|..+++ +++. |.+ +|+ ++.||.||+|++..
T Consensus 216 ~~~~l~~~l---~v~i~~~~~v~~i~~~~~-~~v~-v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 216 IVNTLLSIL---KLNIKFNSPVTEVKKIKD-DEYE-VIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHH---CCCEECSCCEEEEEEEET-TEEE-EEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHhcC---EEEEEECCEEEEEEEcCC-CcEE-EEEEecCCceEEEEcCEEEECcCCC
Confidence 444444434 389999999999987652 2354 444 354 79999999999864
No 221
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=71.83 E-value=10 Score=39.53 Aligned_cols=48 Identities=23% Similarity=0.237 Sum_probs=36.1
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--------------CC--eEEecCEEEEecCh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--------------GK--ETYSAGAVVLAVGI 218 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--------------~g--~~~~ad~VI~a~p~ 218 (393)
.+.+++.|+++++++.|.+|..++ +++.+|++ +| .++.||.||+|+..
T Consensus 377 ~~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 377 VELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 356677899999999999998754 55655543 12 36899999999865
No 222
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=71.19 E-value=6.5 Score=37.32 Aligned_cols=51 Identities=18% Similarity=0.252 Sum_probs=40.1
Q ss_pred cCCeEecCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEecChhhHHHHhhc
Q 016211 175 RGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGISTLQELIKN 227 (393)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VI~a~p~~~~~~Ll~~ 227 (393)
.+.+|.+++.|.+|..++ +++++|.. ++ .++.|+.||++..+-...+||-.
T Consensus 224 ~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~ 278 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMR 278 (526)
T ss_dssp TTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhhh
Confidence 357999999999999987 67888776 33 35788999999888777776543
No 223
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=70.35 E-value=4.8 Score=36.93 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=35.5
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecCh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~ 218 (393)
.+.+++.|.+++++++|++|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 72 ~~~~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 72 AQFWEDKAVEMKLGAEVVSLDPAA--HT---VKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp HHHHHHTTEEEEETCCEEEEETTT--TE---EEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHCCcEEEeCCEEEEEECCC--CE---EEECCCCEEEeeEEEEccCC
Confidence 344567799999999999998765 32 445 6788999999999985
No 224
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=70.12 E-value=3.7 Score=37.72 Aligned_cols=42 Identities=29% Similarity=0.341 Sum_probs=33.5
Q ss_pred HHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
++.|++++++++|+.|..++ .+ |.+ +|+++.+|++|+|+...
T Consensus 70 ~~~~v~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQA--HT---VALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp TSCSCEEEETCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHCCCEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCCC
Confidence 45688999999999998764 33 445 67789999999999873
No 225
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=69.26 E-value=7.2 Score=36.29 Aligned_cols=46 Identities=22% Similarity=0.306 Sum_probs=35.5
Q ss_pred HHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CCeEEecCEEEEecCh
Q 016211 170 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGI 218 (393)
Q Consensus 170 ~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~~~~ad~VI~a~p~ 218 (393)
+.+++.|.++++++.|++|..++ +.+. +.. +++++.+|++|+|+..
T Consensus 66 ~~~~~~gi~~~~~~~V~~id~~~--~~v~-v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 66 EELRRQKIQLLLNREVVAMDVEN--QLIA-WTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp HHHHHTTEEEECSCEEEEEETTT--TEEE-EEETTEEEEEECSEEEECCCC
T ss_pred HHHHHCCCEEEECCEEEEEECCC--CEEE-EEecCceEEEEcCEEEECCCc
Confidence 34566789999999999999876 4443 332 4567999999999987
No 226
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=69.17 E-value=14 Score=35.66 Aligned_cols=56 Identities=18% Similarity=0.161 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEec------C-CCCeEEEEE--e-CCeEEe--cCEEEEecChhh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYD------E-ERCCISDVV--C-GKETYS--AGAVVLAVGIST 220 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~------~-~~~~v~~v~--~-~g~~~~--ad~VI~a~p~~~ 220 (393)
+.+.+.+.+++.|++|++++.|++|... + +.+++. +. . +|+++. ||.||+|+....
T Consensus 328 ~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~~~g~~~~~~~D~vi~a~G~~p 395 (598)
T 2x8g_A 328 MAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHYTDGKKFEEEFETVIFAVGREP 395 (598)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEETTSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEeCCCcEEeccCCEEEEEeCCcc
Confidence 5666777788899999999999888642 1 102332 32 2 566555 999999987643
No 227
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=69.15 E-value=8.9 Score=34.68 Aligned_cols=43 Identities=23% Similarity=0.186 Sum_probs=34.4
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+++.|+++++++.|+.|..++ .. |.++++++.+|++|+|+...
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~~--~~---v~~~~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPGH--QR---IWIGEEEVRYRDLVLAWGAE 112 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGGG--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHhCCcEEEeCCEEEEEECCC--CE---EEECCcEEECCEEEEeCCCC
Confidence 456789999999999998765 33 45667789999999999864
No 228
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=69.11 E-value=7.3 Score=36.73 Aligned_cols=46 Identities=13% Similarity=0.255 Sum_probs=34.7
Q ss_pred HHHHcCCeEecCceeeeEEecCCCCeEEEEEeC--CeEEecCEEEEecChh
Q 016211 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIS 219 (393)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~--g~~~~ad~VI~a~p~~ 219 (393)
.+++.|++++++++|..|..++ +++. +..+ ++++.+|.+|+|+...
T Consensus 101 ~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 101 ELESLGAKVYMESPVQSIDYDA--KTVT-ALVDGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp HHHHTTCEEETTCCEEEEETTT--TEEE-EEETTEEEEEECSEEEECCCEE
T ss_pred HHHhCCCEEEeCCEEEEEECCC--CEEE-EEeCCcEEEEECCEEEECCCCC
Confidence 3456789999999999998766 4453 4323 3579999999999864
No 229
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=67.98 E-value=10 Score=35.08 Aligned_cols=46 Identities=17% Similarity=0.269 Sum_probs=34.4
Q ss_pred HHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEecChh
Q 016211 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VI~a~p~~ 219 (393)
.+++.|+++++++.|..|..++ +.+. +.. +|+ ++.+|++|+|+...
T Consensus 65 ~~~~~gv~~~~~~~v~~i~~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 65 KMESRGVNVFSNTEITAIQPKE--HQVT-VKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp HHHHTTCEEEETEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHCCCEEEECCEEEEEeCCC--CEEE-EEecCCCceEEEeCCEEEEcCCCC
Confidence 3456789999999999998776 4454 443 354 48999999999864
No 230
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=67.58 E-value=3.6 Score=38.55 Aligned_cols=48 Identities=23% Similarity=0.270 Sum_probs=33.9
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-------------------CC--eEEecCEEEEecChh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-------------------GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-------------------~g--~~~~ad~VI~a~p~~ 219 (393)
.+.+++.|+++++++.+.+|..+ +++.+|.+ +| .++.||.||+|+...
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~~---g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~ 377 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTGD---TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFE 377 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEEE---EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHHCCCEEEeCCCceEEeCC---CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCC
Confidence 34567789999999999999742 33322221 23 468999999998864
No 231
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.18 E-value=12 Score=35.21 Aligned_cols=43 Identities=16% Similarity=0.201 Sum_probs=33.3
Q ss_pred HcCCeEecCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEecChh
Q 016211 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VI~a~p~~ 219 (393)
..|+++++++.|..|..++ +.+. +.. +|+ ++.+|.+|+|+...
T Consensus 105 ~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEK--KIVY-AEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp TTCCEEESSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred hcCCEEEeCCEEEEEECCC--CEEE-EEEcCCCceEEEEcCEEEECCCCc
Confidence 3489999999999998776 4454 443 365 79999999999864
No 232
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=67.13 E-value=5.2 Score=36.98 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=32.5
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+++.|++++.+ .|++|..++ ++ |++ +|+++.+|++|+|+.+.
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~~--~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHCCcEEEEe-EEEEEECCC--CE---EEECCCCEEECCEEEEeCCCC
Confidence 34568888766 699998776 33 455 68899999999999975
No 233
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=66.87 E-value=12 Score=36.21 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=35.5
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEecCh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VI~a~p~ 218 (393)
....+..|.++++++.|++|..++ +.+. +.. +|+ ++.+|++|+|+..
T Consensus 100 ~~~~~~~gi~v~~~~~V~~id~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 100 ERMSKRFNLDIRVLSEVVKINKEE--KTIT-IKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp HHHHHHTTCEEECSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHhcCcEEEECCEEEEEECCC--CEEE-EeecCCCCEEEEeCCEEEECCCC
Confidence 333456789999999999999876 4454 443 455 6899999999986
No 234
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=66.79 E-value=7.9 Score=33.51 Aligned_cols=52 Identities=21% Similarity=0.271 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEE-EEeCCeEEecCEEEEecCh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD-VVCGKETYSAGAVVLAVGI 218 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~-v~~~g~~~~ad~VI~a~p~ 218 (393)
+.+.+.+.+++.|.+++++ .|.+| .+++.+.+.. +.+++ ++.+|+||+|+..
T Consensus 64 ~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 64 FMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 5566677777789999998 89999 5541112331 33345 8999999999986
No 235
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=66.48 E-value=11 Score=35.03 Aligned_cols=46 Identities=15% Similarity=0.160 Sum_probs=34.8
Q ss_pred HHHHcCCeEecCceeeeEEecCCCCeEEEEEe--C--CeEEecCEEEEecChh
Q 016211 171 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 219 (393)
Q Consensus 171 ~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~--g~~~~ad~VI~a~p~~ 219 (393)
.+++.|+++++++.|..|..++ +++. +.. + ++++.+|.+|+|+...
T Consensus 67 ~~~~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 67 ELSNLGANVQMRHQVTNVDPET--KTIK-VKDLITNEEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp HHHHTTCEEEESEEEEEEEGGG--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHcCCEEEeCCEEEEEEcCC--CEEE-EEecCCCceEEEECCEEEEccCCC
Confidence 3456789999999999998776 4454 433 2 4679999999999853
No 236
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=65.85 E-value=11 Score=35.72 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=32.2
Q ss_pred HHHcCCeEecCceeeeEEecCCCC-----eEEEEEe-C---C--eEEecCEEEEecCh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERC-----CISDVVC-G---K--ETYSAGAVVLAVGI 218 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~-----~v~~v~~-~---g--~~~~ad~VI~a~p~ 218 (393)
.+..+..|++++.|++|...++++ ..+.|++ + | +++.|++||+|++.
T Consensus 155 A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 155 AQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 344456799999999998754311 1234555 2 2 46899999999984
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=64.91 E-value=4.1 Score=38.56 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=33.0
Q ss_pred HcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+.|+++++++.|.+|..++ .+ |.+ +|+++.+|++|+|+...
T Consensus 102 ~~gv~~~~g~~v~~id~~~--~~---V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD--NM---VKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG--TE---EEETTSCEEEEEEEEECCCEE
T ss_pred cCCeEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCCC
Confidence 4578999999999998765 33 345 67889999999999864
No 238
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=64.80 E-value=1.6 Score=39.02 Aligned_cols=44 Identities=20% Similarity=0.334 Sum_probs=35.7
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.|++|+. ++|++|...+ + ++||.||+|+.++.
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--~-----------~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA--R-----------EGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--H-----------TTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--c-----------CCCCEEEECCCcCh
Confidence 3678888889999999988 8998886432 1 46999999999876
No 239
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=64.69 E-value=7 Score=36.53 Aligned_cols=42 Identities=21% Similarity=0.116 Sum_probs=30.6
Q ss_pred cCCeEecCceeeeEEecCCCCeEEEEEe-----------------CC--eEEecCEEEEecChh
Q 016211 175 RGCEFLDGRRVTDFIYDEERCCISDVVC-----------------GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~-----------------~g--~~~~ad~VI~a~p~~ 219 (393)
.|++|++++.|.+|..++ ++.+|++ +| +++.||.||.++...
T Consensus 265 ~gv~i~~~~~~~~i~~~~---~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGKR---KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp EEEEEECSEEEEEEECSS---SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE
T ss_pred ceEEEEeCCCCeEEecCC---cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc
Confidence 689999999999998542 2333332 24 468999999998754
No 240
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=62.82 E-value=8.2 Score=35.68 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=34.7
Q ss_pred HHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+.+.+++.|++++ ...|++|..++ ++ |++ +|+++.+|+||+|+....
T Consensus 65 l~~~~~~~gv~~~-~~~v~~id~~~--~~---V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 65 IRHYVERKGIHFI-AQSAEQIDAEA--QN---ITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp CHHHHHTTTCEEE-CSCEEEEETTT--TE---EEETTSCEEECSEEEECCCCEE
T ss_pred HHHHHHHCCCEEE-EeEEEEEEcCC--CE---EEECCCCEEECCEEEECCCCCc
Confidence 3445566789987 46999998765 32 455 577899999999998743
No 241
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=62.48 E-value=6.3 Score=37.82 Aligned_cols=46 Identities=9% Similarity=0.344 Sum_probs=34.1
Q ss_pred HHHHHHHcCCeEec--CceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhH
Q 016211 168 WMDSMRTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 221 (393)
Q Consensus 168 l~~~l~~~G~~i~l--~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~ 221 (393)
+.+.+.+.++++.. +++|.+|..+ +|++ +| ++++|.||+||.....
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it~~-------gv~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVTPE-------GIKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEETT-------EEEESSC-EEECSEEEECCCCBSS
T ss_pred HHHHhcCCCEEEEecCCCCceEEccC-------eEEeCCC-eeecCEEEECCccccc
Confidence 34445666788886 8999998632 2445 67 8999999999998753
No 242
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=61.83 E-value=11 Score=34.27 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=34.3
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecCh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 218 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~ 218 (393)
.+.+++.|.++++ ++|++|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 64 ~~~~~~~~i~~~~-~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 64 EKFFQDQAIELIS-DRMVSIDREG--RK---LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp HHHHHHTTEEEEC-CCEEEEETTT--TE---EEESSSCEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEE-EEEEEEECCC--CE---EEECCCCEEECCEEEEeeCC
Confidence 3445667899999 9999998765 33 445 6788999999999986
No 243
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=61.76 E-value=14 Score=35.30 Aligned_cols=44 Identities=14% Similarity=0.008 Sum_probs=33.4
Q ss_pred HHcCCeEecCceeeeEEecCCCCeEEEEEe--CC--eEEecCEEEEecChh
Q 016211 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g--~~~~ad~VI~a~p~~ 219 (393)
+..|.+++++++|++|..++ +.+. +.. +| .++.+|+||+|+...
T Consensus 69 ~~~~i~~~~~~~V~~id~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRAA--KLVT-VRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp HHHCCEEETTEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred HhcCcEEEECCEEEEEECCC--CEEE-EEecCCCCeEEEECCEEEECCCCC
Confidence 34689999999999998876 4454 433 24 378999999999873
No 244
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=61.65 E-value=11 Score=34.88 Aligned_cols=45 Identities=16% Similarity=0.085 Sum_probs=33.5
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe--C--CeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~--g~~~~ad~VI~a~p~~ 219 (393)
+++.|.++++++.|++|..+. ..+. +.. . +.++.+|++|+|+...
T Consensus 67 ~~~~~i~~~~~~~V~~id~~~--~~~~-~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDER--QTVS-VLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHCCEEEETEEEEEEETTT--TEEE-EEETTTTEEEEEECSEEEECCCEE
T ss_pred HHhcCCEEEeCCeEEEEEccC--cEEE-EEeccCCceEEEEcCEEEECCCCc
Confidence 356689999999999998776 3343 333 1 3468899999999874
No 245
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=58.80 E-value=12 Score=34.15 Aligned_cols=48 Identities=13% Similarity=0.259 Sum_probs=34.3
Q ss_pred HHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCe----EEecCEEEEecChh
Q 016211 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE----TYSAGAVVLAVGIS 219 (393)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~----~~~ad~VI~a~p~~ 219 (393)
.+.+.+++.|++++.+ .|++|..++ ..+. + .+++ ++.+|.||+|+...
T Consensus 61 ~~~~~~~~~gv~~~~~-~v~~i~~~~--~~V~-~-~~g~~~~~~~~~d~lViAtG~~ 112 (409)
T 3h8l_A 61 DLSEALPEKGIQFQEG-TVEKIDAKS--SMVY-Y-TKPDGSMAEEEYDYVIVGIGAH 112 (409)
T ss_dssp EHHHHTGGGTCEEEEC-EEEEEETTT--TEEE-E-ECTTSCEEEEECSEEEECCCCE
T ss_pred HHHHHHhhCCeEEEEe-eEEEEeCCC--CEEE-E-ccCCcccceeeCCEEEECCCCC
Confidence 4556667789999988 999998765 3332 2 2332 48999999998764
No 246
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=56.01 E-value=16 Score=34.00 Aligned_cols=42 Identities=21% Similarity=0.197 Sum_probs=30.8
Q ss_pred HcCCeEecCceeeeEEecCCCCeEEEEEe--CCe--EEecCEEEEecCh
Q 016211 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 218 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~--~g~--~~~ad~VI~a~p~ 218 (393)
..|.++++++.|++|..++ +.+. +.. +|+ ++.+|++|+|+..
T Consensus 78 ~~gi~~~~~~~V~~id~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAA--HTVE-IENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---CEEECSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECCC--CEEE-EeecCCCCEEEEECCEEEEeCCC
Confidence 3688999999999998776 4454 443 254 7899999999886
No 247
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=56.00 E-value=5.8 Score=38.00 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=32.2
Q ss_pred HHcCCeEec--CceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHH
Q 016211 173 RTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 222 (393)
Q Consensus 173 ~~~G~~i~l--~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~ 222 (393)
.+.++++.. +++|.+|..+ +|++ +|+++++|.||+||......
T Consensus 341 ~~~nV~lv~~~~~~I~~it~~-------gv~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 341 NRPNVEAVAIKENPIREVTAK-------GVVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp GSTTEEEEETTTSCEEEECSS-------EEEETTCCEEECSEEEECCCBSCSS
T ss_pred cCCCEEEEeCCCCCccEEecC-------eEEcCCCCEEECCEEEECCccCccc
Confidence 445677775 7899998632 2445 78889999999999987644
No 248
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.58 E-value=22 Score=32.95 Aligned_cols=48 Identities=19% Similarity=0.266 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC-eEEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g-~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++++.++.+. + +. +.+. |.+ +| +++.+|++|+|+...
T Consensus 95 ~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v~-V~~~~G~~~i~~d~lViATGs~ 144 (455)
T 1ebd_A 95 GGVEGLLKGNKVEIVKGEAYF-V--DA--NTVR-VVNGDSAQTYTFKNAIIATGSR 144 (455)
T ss_dssp HHHHHHHHTTTCEEEESEEEE-E--ET--TEEE-EEETTEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-c--cC--CeEE-EEeCCCcEEEEeCEEEEecCCC
Confidence 344556667789999998764 3 33 3343 555 45 679999999999864
No 249
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=55.48 E-value=26 Score=30.17 Aligned_cols=53 Identities=8% Similarity=0.120 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.++..+.++..++ |..+..+.+ ....+..+++++.+|+||+|+...
T Consensus 68 l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 68 LMMNMRTQSEKYGTTIITET-IDHVDFSTQ--PFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HHHHHHHHHHHTTCEEECCC-EEEEECSSS--SEEEEETTCCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhcCcEEEEeE-EEEeecCCC--ceEEEECCCeEEEEeEEEEccccc
Confidence 45566666777788877654 555555542 233233367889999999999864
No 250
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=53.93 E-value=19 Score=32.54 Aligned_cols=43 Identities=21% Similarity=0.299 Sum_probs=32.1
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
+...|+++..+ .|++|..++ +. |++ +|+++.+|.+|+|+....
T Consensus 65 ~~~~gv~~i~~-~v~~id~~~--~~---v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 65 LRAHGIQVVHD-SALGIDPDK--KL---VKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp HHHTTCEEECS-CEEEEETTT--TE---EEETTSCEEECSEEEECCCEEE
T ss_pred HHHCCCEEEEe-EEEEEEccC--cE---EEecccceeecceeeeccCCcc
Confidence 34568888765 689998766 33 344 688999999999998753
No 251
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=52.60 E-value=15 Score=34.01 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=31.5
Q ss_pred HHcCCeEecCceeeeEEecCCCCeEEEEEeC-C-eEEecCEEEEecCh
Q 016211 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGI 218 (393)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~-g-~~~~ad~VI~a~p~ 218 (393)
++.|.++++++.|++|..++ . .|.++ | .++.+|++|+|+..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~----~-~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY----V-RVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE----E-EEECSSSEEEEECSEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecCC----C-EEEECCceEEEEcCEEEECCCC
Confidence 46789999999999996543 2 24554 5 47999999999985
No 252
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=51.84 E-value=24 Score=32.73 Aligned_cols=50 Identities=16% Similarity=0.062 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+.+++.|++++.++.+. .++ +.+. |.+ +| +++.+|.||+|+...
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~--~~v~-V~~~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA--NTLL-VDLNDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS--SEEE-EEETTSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC--CeEE-EEeCCCceEEEEcCEEEECCCCC
Confidence 33445566677899999998754 333 3454 555 56 689999999999874
No 253
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=51.50 E-value=6.5 Score=35.16 Aligned_cols=43 Identities=26% Similarity=0.307 Sum_probs=35.0
Q ss_pred HhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 163 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 163 ~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
.+.+.|.+.+++.|++|+. ++|++|..+ . + .||.||+|+..+.
T Consensus 143 ~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----~--------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 143 KYCQYLARELQKLGATFER-RTVTSLEQA-----F--------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----C--------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEcccHhhc-----C--------c-CCCEEEECCCcch
Confidence 3778889999999999998 999988532 0 2 7999999999886
No 254
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=50.33 E-value=30 Score=34.00 Aligned_cols=29 Identities=14% Similarity=0.001 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHcC---CeEecCceeeeEEecC
Q 016211 164 IFEPWMDSMRTRG---CEFLDGRRVTDFIYDE 192 (393)
Q Consensus 164 l~~~l~~~l~~~G---~~i~l~~~V~~I~~~~ 192 (393)
+.+.|.+.+++.| ++|++++.|+++..++
T Consensus 121 le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 121 IERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 5566777787777 7999999999999875
No 255
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=49.08 E-value=31 Score=29.75 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.........+.+..+..+..+....... . ..+..++++++||++|+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 64 LSTKMFEHAKKFGAVYQYGDIKSVEDKGE--Y--KVINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCEEEECSS--C--EEEECSSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhccccccceeeeeeeeeec--c--eeeccCCeEEEeceeEEcccCc
Confidence 33444555566677888887777766554 2 2245578899999999999864
No 256
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=48.89 E-value=3.4 Score=36.50 Aligned_cols=28 Identities=21% Similarity=0.354 Sum_probs=20.9
Q ss_pred CCCCCceEEecccccc---------CCCc--cccchhcc
Q 016211 361 FTSFPNLFMAGDWITT---------RHGS--WSQVTFKL 388 (393)
Q Consensus 361 ~~~~~~L~laGd~~~~---------~~ga--~s~~~a~~ 388 (393)
+|.+||||.|||.... ..|+ .||++||+
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe 318 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAE 318 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHH
Confidence 4678999999997642 2333 59999986
No 257
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=47.77 E-value=4.5 Score=36.84 Aligned_cols=45 Identities=13% Similarity=0.164 Sum_probs=34.7
Q ss_pred hhHhHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhh
Q 016211 161 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 220 (393)
Q Consensus 161 ~~~l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~ 220 (393)
...+.+.+.+.+++.|+++++++.|.+| |+++.||.||++++...
T Consensus 187 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 187 DRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEECcCccc
Confidence 3335566777788899999999999877 23467999999988653
No 258
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.24 E-value=31 Score=31.98 Aligned_cols=48 Identities=13% Similarity=0.138 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++++.++.+. + +. +.+. |.+ +| +++++|.||+|+...
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~~-v~~~~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 100 RGIEGLFKKNKVTYVKGYGKF-V--SP--SEIS-VDTIEGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp HHHHHHHHHHTCEEEESCEEE-E--ET--TEEE-ECCSSSCCEEEECSEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEeEEEE-e--cC--CEEE-EEeCCCceEEEEcCEEEECCCCC
Confidence 344555667799999998764 3 33 3343 444 46 689999999999864
No 259
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=46.16 E-value=20 Score=33.76 Aligned_cols=44 Identities=18% Similarity=0.094 Sum_probs=32.0
Q ss_pred HcCCeEecCceeeeEEecCCCCeEEEEEe-CCe--EEecCEEEEecChh
Q 016211 174 TRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 174 ~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~--~~~ad~VI~a~p~~ 219 (393)
+.|.++++++.|.+|..++ +.+..+.. +++ ++.+|++|+|+...
T Consensus 172 ~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKG--EYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp CTTEEEETTEEECCCEECS--SSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred hcCCEEEcCCEEEEEEcCC--cEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 4578999999999998876 33432232 454 68999999998753
No 260
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=44.83 E-value=14 Score=35.39 Aligned_cols=43 Identities=19% Similarity=0.370 Sum_probs=31.4
Q ss_pred HHHcCCeEe--cCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhhHH
Q 016211 172 MRTRGCEFL--DGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 222 (393)
Q Consensus 172 l~~~G~~i~--l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~~~ 222 (393)
+.+.++++. ..++|++|..+ +|++ +| ++++|.||+||......
T Consensus 353 l~~~~V~lvd~~~~~I~~it~~-------gv~~~dG-~~~~D~iI~ATGf~~~~ 398 (549)
T 4ap3_A 353 YNRDNVELVDLRSTPIVGMDET-------GIVTTGA-HYDLDMIVLATGFDAMT 398 (549)
T ss_dssp GGSTTEEEEETTTSCEEEEETT-------EEEESSC-EEECSEEEECCCEEESS
T ss_pred hcCCCEEEEeCCCCCceEEeCC-------cEEeCCC-ceecCEEEECCcccccc
Confidence 345567777 46899998732 2445 67 99999999999987643
No 261
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=43.35 E-value=28 Score=32.45 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC--eE------EecCEEEEecChhh
Q 016211 165 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ET------YSAGAVVLAVGIST 220 (393)
Q Consensus 165 ~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~------~~ad~VI~a~p~~~ 220 (393)
.+.+.+.+++.|++++.++.+.. ++ +.+. |.+ +| ++ +.+|+||+|+....
T Consensus 99 ~~~~~~~~~~~gv~~~~g~~~~~---~~--~~v~-V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 99 TGGIELLFKKNKVTYYKGNGSFE---DE--TKIR-VTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHHHTTCEEEESEEEES---SS--SEEE-EECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHhCCCEEEEEEEEEc---cC--CeEE-EEecCCCcccccccceEEeCEEEECcCCCC
Confidence 34455566778999999988752 33 3443 555 45 46 99999999999754
No 262
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=42.44 E-value=24 Score=32.37 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=31.5
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~ 219 (393)
+++.|++++.+ .|+.|..++ .. |.+ +|+++.+|.+|+|+...
T Consensus 66 ~~~~gv~~~~~-~v~~id~~~--~~---v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 66 LPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHhcCCEEEEE-EEEEEECCC--CE---EEECCCcEEECCEEEEcCCcc
Confidence 45568898864 899998665 32 445 57789999999998765
No 263
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=42.33 E-value=37 Score=31.71 Aligned_cols=48 Identities=13% Similarity=0.175 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC------------eEEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK------------ETYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g------------~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++++.++.+. .++ +.+. |.+ +| .++++|.||+|+...
T Consensus 99 ~~~~~~~~~~gv~~~~g~~~~---~~~--~~v~-v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 99 GGLAGMAKSRKVDVIQGDGQF---LDP--HHLE-VSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHHTTCEEEEEEEEE---EET--TEEE-EEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCcEEEeeEEEE---ccC--CEEE-EEecCCcccccccccCcceEEEcCEEEECCCCC
Confidence 344555667799999998765 233 3443 443 34 579999999999885
No 264
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=40.56 E-value=30 Score=31.95 Aligned_cols=47 Identities=17% Similarity=0.074 Sum_probs=31.5
Q ss_pred HHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
.+.+.+++.|++++.++.+. .+. +.+. |.++|+++.+|++|+|+...
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~~--~~~~-v~~~g~~~~~d~lviAtG~~ 140 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LSE--RKVL-VEETGEELEARYILIATGSA 140 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SSS--SEEE-ETTTCCEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC--CeEE-EeeCCEEEEecEEEECCCCC
Confidence 34455666789999987653 233 3333 33357789999999999863
No 265
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=38.41 E-value=50 Score=30.60 Aligned_cols=48 Identities=13% Similarity=0.089 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++++.++.+. + +. +.+. |.+ +| +++.+|++|+|+...
T Consensus 97 ~~~~~~~~~~~v~~~~g~~~~-i--~~--~~~~-v~~~~G~~~~~~~d~lviAtG~~ 147 (468)
T 2qae_A 97 GGVEYLFKKNKVTYYKGEGSF-E--TA--HSIR-VNGLDGKQEMLETKKTIIATGSE 147 (468)
T ss_dssp HHHHHHHHHHTCEEEEEEEEE-E--ET--TEEE-EEETTSCEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-e--eC--CEEE-EEecCCceEEEEcCEEEECCCCC
Confidence 344555667799999998653 3 33 3343 555 56 679999999999863
No 266
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=37.31 E-value=11 Score=33.93 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhH
Q 016211 164 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (393)
Q Consensus 164 l~~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~ 221 (393)
+.+.|.+.+++.|++|+++++|++|+.. .+++||.||.|......
T Consensus 100 l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 100 LVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 6677888888889999999999988531 12479999999988754
No 267
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=37.22 E-value=6.3 Score=34.94 Aligned_cols=26 Identities=23% Similarity=0.311 Sum_probs=21.3
Q ss_pred CCCceEEeccccc---------cCCCc--cccchhcc
Q 016211 363 SFPNLFMAGDWIT---------TRHGS--WSQVTFKL 388 (393)
Q Consensus 363 ~~~~L~laGd~~~---------~~~ga--~s~~~a~~ 388 (393)
-+||||++|.... +..|+ +||+|||+
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~ 318 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAE 318 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHH
Confidence 4689999998774 36788 69999986
No 268
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=36.35 E-value=50 Score=30.58 Aligned_cols=44 Identities=25% Similarity=0.326 Sum_probs=30.9
Q ss_pred HHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+++.|++++.++.+. + +. +++ .++|+++.+|+||+|+...
T Consensus 99 ~~~~~~~~gv~~~~g~~~~-~--~~--~~v---~v~g~~~~~d~lViATGs~ 142 (464)
T 2eq6_A 99 VGTLLKGNGVELLRGFARL-V--GP--KEV---EVGGERYGAKSLILATGSE 142 (464)
T ss_dssp HHHHHHHTTCEEEESCEEE-E--ET--TEE---EETTEEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEeeeEEE-c--cC--CEE---EEccEEEEeCEEEEcCCCC
Confidence 3445666799999998654 3 33 333 3447789999999999864
No 269
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=35.16 E-value=74 Score=29.44 Aligned_cols=46 Identities=7% Similarity=0.084 Sum_probs=31.6
Q ss_pred HHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-C-C-eEEecCEEEEecChh
Q 016211 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-K-ETYSAGAVVLAVGIS 219 (393)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~-g-~~~~ad~VI~a~p~~ 219 (393)
+.+.+++.|+++++++.+ .+ +. +.+. |.+ + | +++.+|+||+|+...
T Consensus 103 ~~~~~~~~gv~~~~g~~~-~~--~~--~~~~-v~~~~gg~~~~~~d~lViAtGs~ 151 (474)
T 1zmd_A 103 IAHLFKQNKVVHVNGYGK-IT--GK--NQVT-ATKADGGTQVIDTKNILIATGSE 151 (474)
T ss_dssp HHHHHHHTTCEEEESEEE-EE--ET--TEEE-EECTTSCEEEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEEEEEE-Ee--cC--CEEE-EEecCCCcEEEEeCEEEECCCCC
Confidence 455566778999999754 23 33 3343 555 4 4 579999999999974
No 270
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=34.92 E-value=7.6 Score=34.71 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=21.0
Q ss_pred CCceEEeccccc---------cCCCc--cccchhcc
Q 016211 364 FPNLFMAGDWIT---------TRHGS--WSQVTFKL 388 (393)
Q Consensus 364 ~~~L~laGd~~~---------~~~ga--~s~~~a~~ 388 (393)
+||||.+|-... +..|+ +||+|||+
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~ 328 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAH 328 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHH
Confidence 689999998876 37788 69999986
No 271
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=34.80 E-value=24 Score=33.65 Aligned_cols=44 Identities=16% Similarity=0.250 Sum_probs=29.8
Q ss_pred HHHHcCCeEe--cCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChhhH
Q 016211 171 SMRTRGCEFL--DGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 221 (393)
Q Consensus 171 ~l~~~G~~i~--l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~~~ 221 (393)
.+.+.++++. .+++|++|.. . +|+++++++++|.||+|+.....
T Consensus 347 ~~~~~~v~lv~~~~~~i~~i~~----~---gv~~~d~~~~~D~ii~atG~~~~ 392 (542)
T 1w4x_A 347 MFNRDNVHLVDTLSAPIETITP----R---GVRTSEREYELDSLVLATGFDAL 392 (542)
T ss_dssp HTTSTTEEEEETTTSCEEEECS----S---EEEESSCEEECSEEEECCCCCCT
T ss_pred HhCCCCEEEEecCCCCceEEcC----C---eEEeCCeEEecCEEEEcCCcccc
Confidence 3444445665 4788999852 1 24453378999999999998763
No 272
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=34.51 E-value=85 Score=26.75 Aligned_cols=46 Identities=11% Similarity=0.149 Sum_probs=32.3
Q ss_pred HHHcCCeEecCceeeeEEecCCCCeEEEEEe------CCeEEecCEEEEecChh
Q 016211 172 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 172 l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~------~g~~~~ad~VI~a~p~~ 219 (393)
....+.+.+.++.+.++...++ ...++.. +++++.+|.||+++...
T Consensus 198 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 198 LNHPKIEVIWNSELVELEGDGD--LLNGAKIHNLVSGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp HTCTTEEEECSEEEEEEEESSS--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred hcccceeeEeeeeeEEEEeeee--ccceeEEeecccccceeeccccceEecccc
Confidence 3445678889999999987653 2333332 25679999999998753
No 273
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=34.08 E-value=46 Score=31.17 Aligned_cols=52 Identities=19% Similarity=0.193 Sum_probs=33.5
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecC--CCCeEEEEEe-CCe--EEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDE--ERCCISDVVC-GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~--~~~~v~~v~~-~g~--~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++++.++ |..|..++ +++.+. |.+ +|+ ++.+|.+|+|+...
T Consensus 99 ~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~-V~~~~g~~~~~~~d~lviATGs~ 155 (499)
T 1xdi_A 99 ADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIK-ATAADGSTSEHEADVVLVATGAS 155 (499)
T ss_dssp HHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEE-EECTTSCEEEEEESEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEE-EEeCCCcEEEEEeCEEEEcCCCC
Confidence 345566677899999997 66555420 002233 444 455 79999999999863
No 274
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.93 E-value=1.1e+02 Score=28.09 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=31.4
Q ss_pred HHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+++.|+++++++.+. + ++ .. |.++++++.+|++|+|+...
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~--~~---v~v~~~~~~~d~lviATGs~ 145 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG--KQ---VEVDGQRIQCEHLLLATGSS 145 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC--CE---EEEeeEEEEeCEEEEeCCCC
Confidence 3445667899999998765 2 23 32 45555789999999999874
No 275
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=31.61 E-value=76 Score=29.34 Aligned_cols=46 Identities=22% Similarity=0.217 Sum_probs=31.2
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++++.++. ..+. . ..+ .++|+++.+|++|+|+...
T Consensus 96 ~~~~~~~~~~gv~~~~g~~-~~i~--~--~~v---~~~g~~~~~d~lviAtGs~ 141 (463)
T 2r9z_A 96 SFWDGYVERLGITRVDGHA-RFVD--A--HTI---EVEGQRLSADHIVIATGGR 141 (463)
T ss_dssp HHHHHHHHHTTCEEEESCE-EEEE--T--TEE---EETTEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHCCCEEEEeEE-EEcc--C--CEE---EECCEEEEcCEEEECCCCC
Confidence 3344455677899988854 3342 2 233 3488889999999999864
No 276
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=30.05 E-value=71 Score=29.84 Aligned_cols=48 Identities=19% Similarity=0.155 Sum_probs=32.4
Q ss_pred HHHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe----CC---eEEecCEEEEecChh
Q 016211 166 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC----GK---ETYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~----~g---~~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++. |++++.++ |+.|. . .++. +.. +| +++.+|++|+|+...
T Consensus 107 ~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~v~-v~~~~~~~g~~~~~~~~d~lviAtGs~ 162 (490)
T 1fec_A 107 DSYEGMFADTEGLTFHQGF-GALQD--N--HTVL-VRESADPNSAVLETLDTEYILLATGSW 162 (490)
T ss_dssp HHHHHHHHTSTTEEEEESE-EEEEE--T--TEEE-EESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhcCCCcEEEEeE-EEEee--C--CEEE-EEeeccCCCCceEEEEcCEEEEeCCCC
Confidence 3444556677 88999887 55553 3 3343 443 56 679999999999864
No 277
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=29.92 E-value=62 Score=30.09 Aligned_cols=48 Identities=15% Similarity=0.190 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCe--EEecCEEEEecChh
Q 016211 166 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGIS 219 (393)
Q Consensus 166 ~~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~--~~~ad~VI~a~p~~ 219 (393)
+.+.+.+++.|++++.++ |..| +. +.+. |.+ +|+ ++.+|.+|+|+...
T Consensus 109 ~~~~~~~~~~gv~~~~g~-~~~i--~~--~~~~-v~~~~g~~~~~~~d~lviAtGs~ 159 (479)
T 2hqm_A 109 GIYQKNLEKEKVDVVFGW-ARFN--KD--GNVE-VQKRDNTTEVYSANHILVATGGK 159 (479)
T ss_dssp HHHHHHHHHTTEEEEEEE-EEEC--TT--SCEE-EEESSSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEe--eC--CEEE-EEeCCCcEEEEEeCEEEEcCCCC
Confidence 344455667788998885 5544 33 3343 444 565 79999999999864
No 278
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=29.77 E-value=37 Score=29.68 Aligned_cols=38 Identities=16% Similarity=0.147 Sum_probs=27.8
Q ss_pred cCCeEecCceeeeEEecCCCCeEEEEEe-CCeEEecCEEEEecChhh
Q 016211 175 RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 220 (393)
Q Consensus 175 ~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~~~ad~VI~a~p~~~ 220 (393)
.|. +..+..|.++..+ . |.+ +|+++.||.||++++...
T Consensus 247 ~g~-i~~~~~v~~~~~~----~---v~~~~g~~i~~D~vi~a~G~~p 285 (357)
T 4a9w_A 247 RGV-LAAVPPPARFSPT----G---MQWADGTERAFDAVIWCTGFRP 285 (357)
T ss_dssp TTC-CCEECCCSEEETT----E---EECTTSCEEECSEEEECCCBCC
T ss_pred cCc-eEEecCcceEeCC----e---eEECCCCEecCCEEEECCCcCC
Confidence 344 7888888888632 1 344 688899999999998743
No 279
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=28.18 E-value=82 Score=32.47 Aligned_cols=52 Identities=17% Similarity=0.059 Sum_probs=35.1
Q ss_pred HHHHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe----------------CCeEEecCEEEEecChh
Q 016211 165 FEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC----------------GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 165 ~~~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~----------------~g~~~~ad~VI~a~p~~ 219 (393)
.+.+.+.+.+. ++++++++.|.+|..++ .+..+.. ++.++.+|+||+|+...
T Consensus 184 ~~~~~~~l~~~~~v~~~~~~~V~~i~~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 184 IEQVTSELAEAEETTHLQRTTVFGSYDAN---YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHSTTEEEESSEEEEEEETTT---EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhhcCCcEEEeCCEEEeeecCC---ceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 34555666664 88999999999987543 2322211 12368999999999875
No 280
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=26.69 E-value=83 Score=29.13 Aligned_cols=46 Identities=13% Similarity=0.213 Sum_probs=30.1
Q ss_pred HHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecCh
Q 016211 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 218 (393)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~ 218 (393)
.+...++..|+++..++. ..+ +. ... .|..+|+++.+|+||+|+..
T Consensus 113 ~~~~~~~~~gv~~~~g~~-~~~--~~--~~~-~v~~~g~~~~~d~lviAtG~ 158 (478)
T 3dk9_A 113 IYQNNLTKSHIEIIRGHA-AFT--SD--PKP-TIEVSGKKYTAPHILIATGG 158 (478)
T ss_dssp HHHHHHHHTTCEEEESCE-EEC--SC--SSC-EEEETTEEEECSCEEECCCE
T ss_pred HHHHHHHhCCcEEEEeEE-EEe--eC--CeE-EEEECCEEEEeeEEEEccCC
Confidence 344455667888887752 222 22 122 25568888999999999985
No 281
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=26.29 E-value=77 Score=29.71 Aligned_cols=17 Identities=35% Similarity=0.456 Sum_probs=14.9
Q ss_pred CCeEEecCEEEEecChh
Q 016211 203 GKETYSAGAVVLAVGIS 219 (393)
Q Consensus 203 ~g~~~~ad~VI~a~p~~ 219 (393)
+|+++++|+||+||.-.
T Consensus 392 dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 392 VKETLEVDALMVATGYN 408 (501)
T ss_dssp CCCEEEESEEEECCCEE
T ss_pred CCeEEECCEEEECcCCC
Confidence 57889999999999964
No 282
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=26.29 E-value=1e+02 Score=28.30 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=30.2
Q ss_pred HHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 168 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 168 l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
+.+.+++.|++++.++. +.+. . ..+ .++|+++.+|++|+|+...
T Consensus 99 ~~~~~~~~~v~~~~g~~-~~i~--~--~~v---~~~g~~~~~d~lviAtGs~ 142 (450)
T 1ges_A 99 YENVLGKNNVDVIKGFA-RFVD--A--KTL---EVNGETITADHILIATGGR 142 (450)
T ss_dssp HHHHHHHTTCEEEESCC-EEEE--T--TEE---EETTEEEEEEEEEECCCEE
T ss_pred HHHHHHhCCCEEEEeEE-EEec--C--CEE---EECCEEEEeCEEEECCCCC
Confidence 34445667899998864 3442 2 233 3478889999999999863
No 283
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=24.05 E-value=70 Score=29.58 Aligned_cols=44 Identities=14% Similarity=0.074 Sum_probs=29.9
Q ss_pred HHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CCeE--EecCEEEEecCh
Q 016211 169 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET--YSAGAVVLAVGI 218 (393)
Q Consensus 169 ~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g~~--~~ad~VI~a~p~ 218 (393)
.+.+++.|++++.+ .|..+. . +.+. |.+ +|++ +.+|++|+|+..
T Consensus 96 ~~~~~~~~v~~~~g-~v~~id--~--~~~~-V~~~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 96 RNMSQYETLTFYKG-YVKIKD--P--THVI-VKTDEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp HHHTTCTTEEEESE-EEEEEE--T--TEEE-EEETTSCEEEEEEEEEEECCCE
T ss_pred HHHHHhCCCEEEEe-EEEEec--C--CeEE-EEcCCCcEEEEecCEEEECCCC
Confidence 33445567888877 566665 2 2343 555 5677 999999999986
No 284
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=23.45 E-value=93 Score=29.30 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=30.0
Q ss_pred HHcCCeEecCceeeeEEecCCCCeEEEEEeCCeEEecCEEEEecChh
Q 016211 173 RTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 219 (393)
Q Consensus 173 ~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~~g~~~~ad~VI~a~p~~ 219 (393)
++.|++++++..|+.|.. +. |.++|+++.+|++|+|+...
T Consensus 146 ~~~gv~~~~~~~v~~i~~----~~---v~~~g~~~~~d~lViATGs~ 185 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN----HT---VEAAGKVFKAKNLILAVGAG 185 (523)
T ss_dssp HTSCCCEEESSCCEEEET----TE---EEETTEEEEBSCEEECCCEE
T ss_pred ccCCcEEEEeeEEEEeeC----CE---EEECCEEEEeCEEEECCCCC
Confidence 567889987778887752 22 34457889999999999863
No 285
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=23.25 E-value=85 Score=28.95 Aligned_cols=43 Identities=12% Similarity=0.064 Sum_probs=29.0
Q ss_pred HHHHc-CCeEecCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEecChh
Q 016211 171 SMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 171 ~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VI~a~p~~ 219 (393)
.+++. |++++.++ |..+. . +.+. |.+ +| +++.+|++|+|+...
T Consensus 103 ~~~~~~~v~~~~g~-~~~~~--~--~~~~-v~~~~g~~~~~~~d~lviAtGs~ 149 (467)
T 1zk7_A 103 ILGGNPAITVVHGE-ARFKD--D--QSLT-VRLNEGGERVVMFDRCLVATGAS 149 (467)
T ss_dssp HHTTCTTEEEEEEE-EEEEE--T--TEEE-EEETTSSEEEEECSEEEECCCEE
T ss_pred HHhccCCeEEEEEE-EEEcc--C--CEEE-EEeCCCceEEEEeCEEEEeCCCC
Confidence 34555 78888875 65554 2 3343 555 56 679999999999853
No 286
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=22.96 E-value=88 Score=29.23 Aligned_cols=47 Identities=21% Similarity=0.218 Sum_probs=30.9
Q ss_pred HHHHHHHHc-CCeEecCceeeeEEecCCCCeEEEEEe--C-----CeEEecCEEEEecChh
Q 016211 167 PWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC--G-----KETYSAGAVVLAVGIS 219 (393)
Q Consensus 167 ~l~~~l~~~-G~~i~l~~~V~~I~~~~~~~~v~~v~~--~-----g~~~~ad~VI~a~p~~ 219 (393)
.+...+++. |++++.++ |+.|. + ..+. +.. + ++++.+|++|+|+...
T Consensus 112 ~~~~~l~~~~gv~~~~g~-~~~i~--~--~~v~-v~~~~~~~~~~~~~~~~d~lViATGs~ 166 (495)
T 2wpf_A 112 SYEGMFNDTEGLDFFLGW-GSLES--K--NVVV-VRETADPKSAVKERLQADHILLATGSW 166 (495)
T ss_dssp HHHHHHHHCTTEEEEESE-EEEEE--T--TEEE-EESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred HHHHHHhcCCCeEEEEeE-EEEee--C--CEEE-EeecCCccCCCCeEEEcCEEEEeCCCC
Confidence 344456677 89999886 55442 2 3343 321 3 5679999999999864
No 287
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=22.62 E-value=36 Score=32.40 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=16.9
Q ss_pred CCCCCCceEEeccccc-cCCCc
Q 016211 360 GFTSFPNLFMAGDWIT-TRHGS 380 (393)
Q Consensus 360 ~~~~~~~L~laGd~~~-~~~ga 380 (393)
.++++||||-||+-.. ..||+
T Consensus 363 ~~t~I~GLyAaGE~a~~g~hGa 384 (540)
T 1chu_A 363 GRTDVEGLYAIGEVSYTGLHGA 384 (540)
T ss_dssp CBCSSBTEEECGGGEECSSSTT
T ss_pred CCCccCCEEeccccccccccCC
Confidence 4588999999999874 57775
No 288
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=21.64 E-value=1.4e+02 Score=27.50 Aligned_cols=47 Identities=15% Similarity=0.243 Sum_probs=30.7
Q ss_pred HHHHHHHHcCCeEecCceeeeEEecCCCCeEEEEEe-CC--eEEecCEEEEecChh
Q 016211 167 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 219 (393)
Q Consensus 167 ~l~~~l~~~G~~i~l~~~V~~I~~~~~~~~v~~v~~-~g--~~~~ad~VI~a~p~~ 219 (393)
.+...+++.|+++..++.+. .+. +.+. |.. +| +++.+|+||+|+...
T Consensus 104 ~~~~~~~~~~v~~~~g~~~~---~~~--~~~~-v~~~~g~~~~~~~d~lvlAtG~~ 153 (476)
T 3lad_A 104 GVASLIKANGVTLFEGHGKL---LAG--KKVE-VTAADGSSQVLDTENVILASGSK 153 (476)
T ss_dssp HHHHHHHHHTCEEEESEEEE---CST--TCEE-EECTTSCEEEECCSCEEECCCEE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC--CEEE-EEcCCCceEEEEcCEEEEcCCCC
Confidence 33444566788988887554 233 3343 555 45 579999999999863
No 289
>2csb_A Topoisomerase V, TOP61; topoisomerase IB, helix-turn-helix, helix-H helix, HHH motif, three helix bundle, methanopyrus kandleri isomerase; 2.30A {Methanopyrus kandleri} SCOP: a.60.2.4 a.60.2.4 a.60.2.4 a.60.2.4 a.267.1.1 PDB: 2csd_A
Probab=21.07 E-value=72 Score=26.76 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=30.9
Q ss_pred CccHHHHHHHcCCCHHHHHHHHHHH--HHhhcCCCcccc
Q 016211 95 SITARELFKQFGCSERLYRNVIGPL--VQVGLFAPAEQC 131 (393)
Q Consensus 95 ~~s~~~~l~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~ 131 (393)
+.|++..++.|++++++.+.+++.+ +.+++.++.+++
T Consensus 350 nrtlatlidehglspdaadeliehfesiagilatdleei 388 (519)
T 2csb_A 350 NRTLATLIDEHGLSPDAADELIEHFESIAGILATDLEEI 388 (519)
T ss_dssp CHHHHHHHHHHCCCHHHHHHHHHHHSSHHHHHTSCHHHH
T ss_pred hHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHhccHHHH
Confidence 5688899999999999999999887 667888777654
Done!