Query 016212
Match_columns 393
No_of_seqs 229 out of 1973
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 04:49:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016212.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016212hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 2.3E-39 4.9E-44 317.5 34.1 289 104-392 46-344 (350)
2 KOG1441 Glucose-6-phosphate/ph 100.0 1.3E-40 2.9E-45 315.7 12.0 286 103-392 13-303 (316)
3 TIGR00817 tpt Tpt phosphate/ph 100.0 8.7E-37 1.9E-41 294.0 29.3 284 107-392 2-289 (302)
4 KOG1443 Predicted integral mem 100.0 1.9E-27 4.1E-32 218.4 24.1 294 98-391 7-310 (349)
5 KOG1444 Nucleotide-sugar trans 100.0 1.5E-26 3.2E-31 215.4 25.5 278 109-390 14-294 (314)
6 PLN00411 nodulin MtN21 family 99.9 6.6E-25 1.4E-29 215.0 28.1 266 118-393 24-325 (358)
7 PF08449 UAA: UAA transporter 99.9 3.8E-24 8.2E-29 206.2 29.6 265 121-392 14-293 (303)
8 PRK11272 putative DMT superfam 99.9 5.9E-23 1.3E-27 196.9 29.6 269 105-392 10-281 (292)
9 PRK11689 aromatic amino acid e 99.9 4.9E-23 1.1E-27 197.8 29.0 263 105-392 6-283 (295)
10 TIGR00950 2A78 Carboxylate/Ami 99.9 5E-23 1.1E-27 193.6 27.9 253 123-391 5-259 (260)
11 PRK11453 O-acetylserine/cystei 99.9 2.6E-22 5.5E-27 193.1 28.2 270 106-392 7-283 (299)
12 PRK15430 putative chlorampheni 99.9 4.1E-21 9E-26 184.5 28.3 267 103-391 8-280 (296)
13 PRK10532 threonine and homoser 99.9 1E-20 2.2E-25 181.5 30.7 262 103-391 12-276 (293)
14 KOG1442 GDP-fucose transporter 99.9 7.5E-23 1.6E-27 185.3 8.4 287 99-390 20-321 (347)
15 PF06027 DUF914: Eukaryotic pr 99.9 7.3E-20 1.6E-24 176.3 28.1 262 121-392 27-301 (334)
16 TIGR03340 phn_DUF6 phosphonate 99.9 8.6E-20 1.9E-24 174.0 24.9 258 120-393 14-280 (281)
17 COG5070 VRG4 Nucleotide-sugar 99.8 5E-20 1.1E-24 162.4 17.0 268 111-387 10-287 (309)
18 KOG1580 UDP-galactose transpor 99.8 1.3E-20 2.7E-25 167.4 11.3 252 133-392 50-309 (337)
19 KOG1581 UDP-galactose transpor 99.8 3.3E-18 7.2E-23 157.8 24.9 285 102-393 9-310 (327)
20 COG0697 RhaT Permeases of the 99.8 3.2E-16 6.9E-21 148.7 31.8 256 122-392 22-283 (292)
21 TIGR00688 rarD rarD protein. T 99.8 1.5E-16 3.3E-21 149.5 27.1 244 105-371 4-255 (256)
22 PF03151 TPT: Triose-phosphate 99.8 2.7E-17 5.8E-22 142.3 15.4 143 250-392 1-149 (153)
23 KOG1582 UDP-galactose transpor 99.7 1.3E-16 2.8E-21 144.7 17.2 282 104-393 40-329 (367)
24 KOG2765 Predicted membrane pro 99.7 8.1E-17 1.8E-21 152.4 15.9 221 167-391 157-385 (416)
25 TIGR00776 RhaT RhaT L-rhamnose 99.7 1.4E-14 3E-19 138.7 27.0 259 106-392 4-284 (290)
26 COG5006 rhtA Threonine/homoser 99.7 3.7E-14 8E-19 127.9 24.8 244 125-390 30-276 (292)
27 PF04142 Nuc_sug_transp: Nucle 99.7 2.2E-14 4.8E-19 133.5 21.4 213 166-387 14-244 (244)
28 KOG4510 Permease of the drug/m 99.6 2.7E-16 5.8E-21 142.5 3.5 265 108-390 40-319 (346)
29 KOG1583 UDP-N-acetylglucosamin 99.6 2.1E-14 4.5E-19 130.9 12.4 256 127-391 23-309 (330)
30 KOG3912 Predicted integral mem 99.6 2.5E-13 5.3E-18 124.1 17.8 276 114-392 10-330 (372)
31 COG2962 RarD Predicted permeas 99.5 6.5E-11 1.4E-15 109.7 27.0 266 104-391 8-278 (293)
32 KOG2234 Predicted UDP-galactos 99.5 6.3E-11 1.4E-15 112.7 25.9 216 169-393 92-319 (345)
33 KOG2766 Predicted membrane pro 99.2 1.8E-11 3.9E-16 110.7 4.7 255 121-392 32-295 (336)
34 TIGR00803 nst UDP-galactose tr 99.2 3.4E-10 7.3E-15 104.2 12.8 189 193-393 2-221 (222)
35 PF00892 EamA: EamA-like trans 99.1 8.4E-10 1.8E-14 91.2 10.6 117 121-239 5-124 (126)
36 COG2510 Predicted membrane pro 99.0 4.1E-09 8.9E-14 85.9 12.3 120 121-241 17-139 (140)
37 PF13536 EmrE: Multidrug resis 98.9 2.8E-09 6.1E-14 87.5 8.1 104 141-245 2-110 (113)
38 KOG4314 Predicted carbohydrate 98.9 1.1E-08 2.3E-13 89.6 9.9 211 170-391 54-271 (290)
39 PF06800 Sugar_transport: Suga 98.9 5.7E-07 1.2E-11 84.1 20.7 213 161-391 35-266 (269)
40 PF00892 EamA: EamA-like trans 98.8 1.9E-08 4.1E-13 83.0 8.4 122 259-392 1-122 (126)
41 COG2510 Predicted membrane pro 98.7 1.9E-07 4.2E-12 76.3 10.7 132 250-392 4-135 (140)
42 TIGR00950 2A78 Carboxylate/Ami 98.6 2.3E-06 4.9E-11 80.3 17.1 130 104-237 129-260 (260)
43 PRK15430 putative chlorampheni 98.6 1.9E-06 4.2E-11 82.8 16.0 138 245-392 4-141 (296)
44 TIGR00688 rarD rarD protein. T 98.5 2.9E-06 6.2E-11 79.7 15.3 137 249-392 2-138 (256)
45 TIGR03340 phn_DUF6 phosphonate 98.4 7.8E-06 1.7E-10 78.0 14.0 129 251-392 3-131 (281)
46 PRK10532 threonine and homoser 98.3 2.2E-05 4.8E-10 75.4 15.7 117 122-240 163-280 (293)
47 PRK15051 4-amino-4-deoxy-L-ara 98.3 1.4E-05 3.1E-10 65.3 11.6 64 178-241 46-109 (111)
48 PLN00411 nodulin MtN21 family 98.2 3.4E-05 7.4E-10 76.1 14.8 134 249-392 13-152 (358)
49 PRK11689 aromatic amino acid e 98.2 3.2E-05 7E-10 74.2 14.2 78 164-241 210-287 (295)
50 PRK11272 putative DMT superfam 98.2 4.5E-05 9.8E-10 73.1 14.6 118 123-242 166-286 (292)
51 PRK13499 rhamnose-proton sympo 98.0 0.0027 5.8E-08 61.9 23.7 226 164-391 68-336 (345)
52 PF05653 Mg_trans_NIPA: Magnes 98.0 7.4E-05 1.6E-09 71.9 12.1 63 178-240 59-121 (300)
53 PRK11453 O-acetylserine/cystei 97.9 0.00033 7.2E-09 67.3 15.4 132 106-241 146-287 (299)
54 PF03151 TPT: Triose-phosphate 97.9 0.00079 1.7E-08 57.7 15.6 124 117-240 10-152 (153)
55 PRK02971 4-amino-4-deoxy-L-ara 97.8 0.00028 6E-09 59.2 11.5 116 249-393 2-119 (129)
56 TIGR00817 tpt Tpt phosphate/ph 97.8 0.00014 3E-09 70.1 10.9 120 121-241 159-293 (302)
57 PTZ00343 triose or hexose phos 97.7 0.001 2.3E-08 65.5 15.0 136 247-393 47-183 (350)
58 COG2962 RarD Predicted permeas 97.6 0.0013 2.7E-08 61.7 12.7 134 247-391 5-139 (293)
59 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.00073 1.6E-08 64.8 11.6 112 122-240 167-287 (290)
60 COG0697 RhaT Permeases of the 97.5 0.004 8.6E-08 58.7 15.7 119 121-242 168-288 (292)
61 PRK02971 4-amino-4-deoxy-L-ara 97.5 0.00053 1.2E-08 57.5 7.9 71 173-243 51-124 (129)
62 COG5006 rhtA Threonine/homoser 97.4 0.0026 5.7E-08 58.4 12.5 116 121-237 162-278 (292)
63 PRK10452 multidrug efflux syst 97.3 0.00082 1.8E-08 55.5 7.1 70 173-242 34-104 (120)
64 PF13536 EmrE: Multidrug resis 97.3 0.0033 7.2E-08 51.3 10.8 50 342-392 53-102 (113)
65 PRK15051 4-amino-4-deoxy-L-ara 97.2 0.0021 4.5E-08 52.5 8.1 51 342-392 55-105 (111)
66 PRK09541 emrE multidrug efflux 97.1 0.0021 4.5E-08 52.3 7.2 67 175-241 36-103 (110)
67 PRK11431 multidrug efflux syst 97.0 0.0033 7.1E-08 50.7 7.8 67 174-240 34-101 (105)
68 KOG2922 Uncharacterized conser 97.0 0.004 8.7E-08 59.2 9.4 68 175-242 69-137 (335)
69 COG2076 EmrE Membrane transpor 97.0 0.0023 5E-08 51.3 6.7 68 174-241 35-103 (106)
70 PRK10650 multidrug efflux syst 97.0 0.0031 6.6E-08 51.2 7.5 67 173-239 39-106 (109)
71 COG4975 GlcU Putative glucose 97.0 0.0003 6.6E-09 64.2 1.3 212 161-390 51-279 (288)
72 PF06800 Sugar_transport: Suga 96.9 0.022 4.7E-07 53.6 13.0 69 170-238 196-268 (269)
73 PF06027 DUF914: Eukaryotic pr 96.5 0.072 1.6E-06 52.0 14.3 139 100-243 165-307 (334)
74 KOG2234 Predicted UDP-galactos 96.5 0.061 1.3E-06 52.0 13.2 141 251-392 17-160 (345)
75 PRK10650 multidrug efflux syst 96.5 0.038 8.3E-07 44.8 10.2 60 328-391 43-103 (109)
76 PF08449 UAA: UAA transporter 96.5 0.055 1.2E-06 52.1 13.1 130 112-241 159-297 (303)
77 PF00893 Multi_Drug_Res: Small 96.3 0.028 6.1E-07 44.2 8.5 56 177-232 37-93 (93)
78 PRK10452 multidrug efflux syst 96.3 0.032 7E-07 46.0 8.9 62 327-392 37-99 (120)
79 PF04657 DUF606: Protein of un 96.2 0.17 3.6E-06 43.0 13.2 117 121-238 15-138 (138)
80 PRK09541 emrE multidrug efflux 96.2 0.045 9.7E-07 44.5 9.1 61 328-392 38-99 (110)
81 PF04142 Nuc_sug_transp: Nucle 96.1 0.018 3.9E-07 53.8 7.2 66 327-392 20-85 (244)
82 PF04657 DUF606: Protein of un 96.0 0.2 4.3E-06 42.5 12.6 130 251-393 3-138 (138)
83 PRK11431 multidrug efflux syst 95.9 0.081 1.8E-06 42.6 9.4 59 329-391 38-97 (105)
84 TIGR00803 nst UDP-galactose tr 95.9 0.14 3.1E-06 46.8 12.0 67 172-238 155-221 (222)
85 COG2076 EmrE Membrane transpor 95.8 0.086 1.9E-06 42.3 8.7 60 328-391 38-98 (106)
86 PF10639 UPF0546: Uncharacteri 95.5 0.053 1.2E-06 44.2 6.6 69 170-239 43-112 (113)
87 PRK13499 rhamnose-proton sympo 95.2 0.17 3.6E-06 49.6 10.3 132 248-392 6-149 (345)
88 PF10639 UPF0546: Uncharacteri 94.7 0.37 8.1E-06 39.3 9.6 41 353-393 71-111 (113)
89 COG3238 Uncharacterized protei 94.2 1.4 3E-05 37.8 12.3 120 120-239 18-144 (150)
90 PF00893 Multi_Drug_Res: Small 93.8 0.33 7.1E-06 38.1 7.4 55 329-387 38-93 (93)
91 PF05653 Mg_trans_NIPA: Magnes 93.3 0.56 1.2E-05 45.2 9.4 112 247-392 5-118 (300)
92 KOG4510 Permease of the drug/m 91.4 0.15 3.2E-06 47.6 2.7 74 164-237 248-321 (346)
93 PF07857 DUF1632: CEO family ( 89.1 0.92 2E-05 42.5 5.9 53 250-307 1-53 (254)
94 COG3238 Uncharacterized protei 88.9 9 0.00019 32.9 11.3 134 248-392 4-142 (150)
95 KOG1581 UDP-galactose transpor 88.7 5.4 0.00012 38.1 10.7 126 109-238 174-310 (327)
96 KOG4314 Predicted carbohydrate 86.9 0.9 1.9E-05 40.6 4.1 51 342-392 71-121 (290)
97 COG4975 GlcU Putative glucose 83.0 0.91 2E-05 42.0 2.5 99 140-239 181-283 (288)
98 KOG2765 Predicted membrane pro 82.0 3.9 8.5E-05 40.1 6.4 66 327-392 162-227 (416)
99 KOG1441 Glucose-6-phosphate/ph 81.5 4.8 0.0001 39.0 6.9 132 108-241 164-307 (316)
100 COG5070 VRG4 Nucleotide-sugar 79.9 31 0.00068 31.7 11.0 73 165-237 220-292 (309)
101 KOG1444 Nucleotide-sugar trans 73.2 29 0.00062 33.5 9.4 71 170-240 228-299 (314)
102 KOG1580 UDP-galactose transpor 71.0 7.6 0.00017 35.8 4.8 72 167-238 239-310 (337)
103 PF06379 RhaT: L-rhamnose-prot 70.4 58 0.0013 31.9 10.9 134 248-392 6-149 (344)
104 PF06379 RhaT: L-rhamnose-prot 70.0 1.1E+02 0.0025 29.9 19.9 106 165-270 69-194 (344)
105 PF04342 DUF486: Protein of un 64.9 5.1 0.00011 32.0 2.1 30 364-393 76-105 (108)
106 KOG1442 GDP-fucose transporter 56.7 8.9 0.00019 36.2 2.5 52 342-393 120-171 (347)
107 KOG3912 Predicted integral mem 55.8 1.1E+02 0.0025 29.1 9.6 49 343-391 105-153 (372)
108 COG3169 Uncharacterized protei 53.0 13 0.00028 29.3 2.5 30 364-393 83-112 (116)
109 PF04342 DUF486: Protein of un 49.7 1.4E+02 0.0029 24.1 9.9 35 205-239 72-106 (108)
110 KOG4831 Unnamed protein [Funct 48.0 25 0.00054 28.2 3.4 61 179-239 62-123 (125)
111 PRK02237 hypothetical protein; 42.4 40 0.00087 27.2 3.8 41 352-392 61-101 (109)
112 PRK10447 HflBKC-binding inner 42.2 2.7E+02 0.0059 25.4 16.2 69 195-267 104-178 (219)
113 PF02694 UPF0060: Uncharacteri 40.5 41 0.00089 27.0 3.6 41 352-392 59-99 (107)
114 KOG1582 UDP-galactose transpor 38.6 2E+02 0.0042 27.5 8.2 51 194-244 285-335 (367)
115 PRK02237 hypothetical protein; 37.7 46 0.00099 26.8 3.5 42 200-241 64-105 (109)
116 PF02694 UPF0060: Uncharacteri 37.7 48 0.001 26.7 3.6 43 200-242 62-104 (107)
117 KOG2922 Uncharacterized conser 37.4 33 0.00071 33.2 3.1 113 246-392 18-132 (335)
118 PF08627 CRT-like: CRT-like; 36.0 1.3E+02 0.0028 25.0 6.0 43 103-145 53-96 (130)
119 PRK10666 ammonium transporter; 35.5 4.9E+02 0.011 26.4 18.9 82 215-299 272-354 (428)
120 KOG4831 Unnamed protein [Funct 35.1 75 0.0016 25.6 4.3 38 356-393 85-122 (125)
121 PF13937 DUF4212: Domain of un 31.9 1.6E+02 0.0035 22.4 5.6 40 99-138 4-47 (81)
122 COG1742 Uncharacterized conser 31.4 90 0.0019 25.0 4.2 41 202-242 65-105 (109)
123 KOG2766 Predicted membrane pro 29.9 18 0.00038 34.0 0.0 50 343-392 97-146 (336)
124 KOG2322 N-methyl-D-aspartate r 29.3 2.7E+02 0.0058 25.8 7.5 18 280-297 192-209 (237)
125 PF00909 Ammonium_transp: Ammo 24.6 7.1E+02 0.015 24.8 18.4 94 199-296 227-322 (399)
126 PF05297 Herpes_LMP1: Herpesvi 22.3 29 0.00063 32.9 0.0 28 178-205 117-144 (381)
127 COG3169 Uncharacterized protei 21.9 4.1E+02 0.0089 21.1 10.2 33 208-240 82-114 (116)
128 COG3162 Predicted membrane pro 21.3 4.2E+02 0.0092 21.0 6.8 57 100-156 21-83 (102)
129 TIGR03647 Na_symport_sm probab 20.2 3.9E+02 0.0084 20.1 5.8 31 108-138 10-43 (77)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=2.3e-39 Score=317.55 Aligned_cols=289 Identities=36% Similarity=0.622 Sum_probs=250.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcC-CCCC--CHHHHHHHHHHHHHHH
Q 016212 104 RKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RPKV--SSTQLAAILPLALVHT 180 (393)
Q Consensus 104 ~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~-~~~~--~~~~~~~~l~~gl~~~ 180 (393)
..+++.++|+.||..|+..++.||++++.+|+|++++++|++++++++..+|..+.+ +|+. .+++++.++++|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999998887766765433 3444 2557889999999998
Q ss_pred HHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHHHHHHHHHHH
Q 016212 181 LGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLT 260 (393)
Q Consensus 181 ~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~ 260 (393)
..+...+.|++++++++++++|+++|+++++++++++|||++++++++++++++|+++++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred HHHHHHHHHHhhcccc---CCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhh----hhcCCchHHHHHHHHHHHHH
Q 016212 261 NQSRNVLSKKVMVNKE---EALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYL----QSAGLNLKEVYVRSLIAAIC 333 (393)
Q Consensus 261 ~a~~~vl~k~~~~~~~---~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~----~~~~~~~~~l~~~~~~s~v~ 333 (393)
+++|+++.||.+++++ +++++.++..++.+++.++++|+....|+........ +...+....+...++.++++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~ 285 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVW 285 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Confidence 9999999999886542 2577888888899999999999987777643221110 00111112233356778999
Q ss_pred HHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 334 YHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 334 ~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
++++|..+|.++++++|+++++.+++||++++++|+++|||++|+.+++|.+++++|++
T Consensus 286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~ 344 (350)
T PTZ00343 286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGAL 344 (350)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999975
No 2
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=315.74 Aligned_cols=286 Identities=35% Similarity=0.527 Sum_probs=256.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhhcCCCC--CCHHHHHHHHHHHHH
Q 016212 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLK--VYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPK--VSSTQLAAILPLALV 178 (393)
Q Consensus 103 ~~~l~l~~~~~~w~~~s~~~~~~nK~~l~--~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~--~~~~~~~~~l~~gl~ 178 (393)
++.......+..|++.+++.++.||++++ +|++|++++.+|++++.+.....+.++..+++ .++.+++.++++|++
T Consensus 13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~ 92 (316)
T KOG1441|consen 13 KKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV 92 (316)
T ss_pred chhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH
Confidence 36677888899999999999999999999 89999999999999999998888888776322 256789999999999
Q ss_pred HHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHHHHHHHHH
Q 016212 179 HTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASN 258 (393)
Q Consensus 179 ~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 258 (393)
++++++++|.|++++|+|++|++|+++|++++++++++.+|++++..+.++++++.||++++.+|.++|+.|++.+++++
T Consensus 93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~ 172 (316)
T KOG1441|consen 93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISN 172 (316)
T ss_pred HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHH-HHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHH
Q 016212 259 LTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMI-PVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAY 337 (393)
Q Consensus 259 l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~-p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~ 337 (393)
+.+++++++.|+.++++++++|++++++|+++++..+++ |.....|+... . .+....++.. .+.. +...++++++
T Consensus 173 ~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~~-~~~~-~~~sv~~f~~ 248 (316)
T KOG1441|consen 173 LAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFVT-FLIL-LLNSVLAFLL 248 (316)
T ss_pred HHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccchh-hHHH-HHHHHHHHHH
Confidence 999999999999998777899999999999999999999 87776676554 2 2232233333 2223 3334999999
Q ss_pred HHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 338 QQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 338 ~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
|+..|.+++++||+|+++.|++|++++++.|+++|+|++|+.|++|+++++.|++
T Consensus 249 Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~ 303 (316)
T KOG1441|consen 249 NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVF 303 (316)
T ss_pred HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999985
No 3
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=8.7e-37 Score=294.02 Aligned_cols=284 Identities=52% Similarity=0.819 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 016212 107 EVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RPKVSSTQLAAILPLALVHTLGNLF 185 (393)
Q Consensus 107 ~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~-~~~~~~~~~~~~l~~gl~~~~~~~~ 185 (393)
++.+.++.||..|++++++||++++++++|+++++.|++++.+++.+.+..+.+ +++.++++++.+++.|++++.++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999999999999998877666543322 5567789999999999999999999
Q ss_pred hhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHHHHHHHHHHHHHHHH
Q 016212 186 TNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRN 265 (393)
Q Consensus 186 ~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~ 265 (393)
.|.|++|+++++++++++++|+++++++++++|||++++++.+++++++|+++...+|.+++..|++++++++++|+++.
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777778889999999999999999
Q ss_pred HHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhc--CCchHHHHHHH-HHHHHHHHHHHHHHH
Q 016212 266 VLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSA--GLNLKEVYVRS-LIAAICYHAYQQVSY 342 (393)
Q Consensus 266 vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~--~~~~~~l~~~~-~~s~v~~~l~~~~~~ 342 (393)
++.||.+++ +++|+.++..|+...+.++++|.....|+.......+... .......+... ..+..++..+|...+
T Consensus 162 v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T TIGR00817 162 IFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF 239 (302)
T ss_pred HHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998642 3689999999999999999999987777643222111111 11112223223 333346777887888
Q ss_pred HHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 343 MILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 343 ~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
..++++||.++++.+++||++++++|++++||++|..+++|++++++|++
T Consensus 240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~ 289 (302)
T TIGR00817 240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF 289 (302)
T ss_pred HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986
No 4
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=1.9e-27 Score=218.37 Aligned_cols=294 Identities=22% Similarity=0.312 Sum_probs=249.1
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-CCC----CCC-HHHHHH
Q 016212 98 QTTELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNL-YRP----KVS-STQLAA 171 (393)
Q Consensus 98 ~~~~~~~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~-~~~----~~~-~~~~~~ 171 (393)
+.+.+......+.++..||+++++++.++|+.-.+|++|++++..|+++-.++.....+... +++ ..+ ++++++
T Consensus 7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~ 86 (349)
T KOG1443|consen 7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRR 86 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHH
Confidence 44566677777777899999999999999999999999999999999988777655443322 222 233 456788
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHH
Q 016212 172 ILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGF 251 (393)
Q Consensus 172 ~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~ 251 (393)
..|.|+..+++..++|++++|++++++++.|+..++|+.+++.+|.-||+++.-.+.++++-+|+.+.+.++.++|..|+
T Consensus 87 ~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf 166 (349)
T KOG1443|consen 87 LAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGF 166 (349)
T ss_pred hhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc-CCCChhhHHHHHHHHHHHHHHHHHHHhcCccchh--hhhhhcCCc-hHHHHHHH
Q 016212 252 WSAMASNLTNQSRNVLSKKVMVNKE-EALDNITLFSIITVMSFILMIPVTLIMEGVTFTP--AYLQSAGLN-LKEVYVRS 327 (393)
Q Consensus 252 ~~~l~s~l~~a~~~vl~k~~~~~~~-~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~--~~~~~~~~~-~~~l~~~~ 327 (393)
.++++++++.++++.+.++++++.+ .+-+|+++.++..+.-.+.++|..+.+||..... ..+...+.. .......+
T Consensus 167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i 246 (349)
T KOG1443|consen 167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI 246 (349)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence 9999999999999999999998765 4568899999999998999999999999875331 222222221 11222233
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 328 LIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 328 ~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
...|...++...+.|.++.+++.+|.|+.+.+|.+.+++++.++.+|.++..++.|..+...|+
T Consensus 247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi 310 (349)
T KOG1443|consen 247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGI 310 (349)
T ss_pred HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHH
Confidence 4456677777778899999999999999999999999999999999999999999999999876
No 5
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.5e-26 Score=215.44 Aligned_cols=278 Identities=20% Similarity=0.260 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH--HHHHHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 016212 109 LLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTT--CQFGVGTVLVLLLWTFNLY-RPKVSSTQLAAILPLALVHTLGNLF 185 (393)
Q Consensus 109 ~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~--~r~~~~~lll~~~~~~~~~-~~~~~~~~~~~~l~~gl~~~~~~~~ 185 (393)
....+.|+.+++.+.+.||++++.+++|..+.. .|..+..+.+......|.. .++++++..|+++|+++++.++...
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 355678889999999999999999999955555 9999998888777766665 5678899999999999999999999
Q ss_pred hhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHHHHHHHHHHHHHHHH
Q 016212 186 TNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRN 265 (393)
Q Consensus 186 ~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~ 265 (393)
+..+++|+++++++++|..+|+++++.+.+++|.|++...+.++....+|......+|.+++..|+.|++.+.++.+.+.
T Consensus 94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~ 173 (314)
T KOG1444|consen 94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV 173 (314)
T ss_pred ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016212 266 VLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMIL 345 (393)
Q Consensus 266 vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l 345 (393)
++.|+..+ ..+.+...+++|.++.+.+.+....++.|+++ ....+...+.....+..+..+|++++..++..+++.
T Consensus 174 v~~kk~vd--~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~--~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct 249 (314)
T KOG1444|consen 174 VYVKKSVD--SANLNKFGLVFYNNLLSLPPLLILSFITGELD--ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCT 249 (314)
T ss_pred HHHHHhhc--cccccceeEEeehhHHHHHHHHHHHHHhcchH--HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999764 35678889999999999998888887777765 111222223334566778899999999999999999
Q ss_pred cccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhc
Q 016212 346 QRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSN 390 (393)
Q Consensus 346 ~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g 390 (393)
+..|++|+++++..+...+.+.+.+++|++.++.+++|+.+-+.|
T Consensus 250 ~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~g 294 (314)
T KOG1444|consen 250 RVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFG 294 (314)
T ss_pred hhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhh
Confidence 999999999999777777777777777789999999999886554
No 6
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.94 E-value=6.6e-25 Score=215.00 Aligned_cols=266 Identities=13% Similarity=0.103 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhh-c-C-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q 016212 118 FNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFN-L-Y-RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVA 194 (393)
Q Consensus 118 ~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~-~-~-~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~s 194 (393)
...++..+.|..++..-.|..+.++|+.++.+++.++...+ + + +++.+++++..+...|++..+.+.+.+.|++|++
T Consensus 24 ~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~ts 103 (358)
T PLN00411 24 SVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSN 103 (358)
T ss_pred HHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33467788999998766688899999999988876554322 1 1 2344566777777788877666778999999999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHH------hCCCCCHHHHHHHHHHhhhheeeecC-Cc-----------------------
Q 016212 195 VSFTHTIKATEPFFSVLLSAMF------LGEFPTLWVVGSLIPIMGGVALASVT-EV----------------------- 244 (393)
Q Consensus 195 vs~~~ii~s~~Pift~lls~l~------l~ek~~~~~~~sl~l~~~Gv~l~~~~-~~----------------------- 244 (393)
++.+.++.++.|++++++++++ ++||.+++++++++++++|+++.... +.
T Consensus 104 a~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 183 (358)
T PLN00411 104 PTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSS 183 (358)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCC
Confidence 9999999999999999999999 69999999999999999999875531 10
Q ss_pred ccc-HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCh-hhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCc-hH
Q 016212 245 SFN-WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDN-ITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLN-LK 321 (393)
Q Consensus 245 ~~~-~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~-~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~-~~ 321 (393)
..+ ..|.++.++++++|++++++.|+..+ +.++ .....++..++.+.+.+.....|+.+...+... .+.. ..
T Consensus 184 ~~~~~lG~~l~l~aa~~wa~~~il~~~~~~----~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~ 258 (358)
T PLN00411 184 NSDWLIGGALLTIQGIFVSVSFILQAHIMS----EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIH-FDITLIT 258 (358)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHH----HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceec-cchHHHH
Confidence 112 45999999999999999999999864 3333 355556666666555555555554322111111 1111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 322 EVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 322 ~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
.+|.. +.+++++.+| ++++++.+|.+.++..++.|++++++|++++||++++.+++|.+++++|+++
T Consensus 259 i~y~~-i~t~lay~lw----~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l 325 (358)
T PLN00411 259 IVTMA-IITSVYYVIH----SWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA 325 (358)
T ss_pred HHHHH-HHHHHHHHHH----HHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 22322 2344555555 5889999999999999999999999999999999999999999999999873
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.94 E-value=3.8e-24 Score=206.22 Aligned_cols=265 Identities=17% Similarity=0.291 Sum_probs=214.7
Q ss_pred HHHHHHHHHHhc-C--CchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhH
Q 016212 121 IFNIYNKQVLKV-Y--RFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSF 197 (393)
Q Consensus 121 ~~~~~nK~~l~~-f--~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~ 197 (393)
...++.+.+.+. . ++|+++++.|+++..+.......... +++.++..++.+++.++++.++..++|.|++|+|.++
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~ 92 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPT 92 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 344556666653 2 26999999999999887765544332 2344566778889999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCcc----c------cHHHHHHHHHHHHHHHHHHHH
Q 016212 198 THTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVS----F------NWAGFWSAMASNLTNQSRNVL 267 (393)
Q Consensus 198 ~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~s~l~~a~~~vl 267 (393)
.+++|++.|+++++++++++|+|++++++++++++++|+++...+|.+ . ...|+++.+++.++++...++
T Consensus 93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~ 172 (303)
T PF08449_consen 93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY 172 (303)
T ss_pred HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998865421 1 123999999999999999999
Q ss_pred HHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhc--CccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016212 268 SKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIME--GVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMIL 345 (393)
Q Consensus 268 ~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e--~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l 345 (393)
+||.+++ .+.++.++++|+++++.+.+++.....+ +......... ..+..+..++..+++....+...+.++
T Consensus 173 qe~~~~~--~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~----~~p~~~~~l~~~s~~~~~g~~~i~~~~ 246 (303)
T PF08449_consen 173 QEKLFKK--YGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS----AHPSVLLYLLLFSLTGALGQFFIFYLI 246 (303)
T ss_pred HHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH----HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999865 4678899999999999998888776632 2111011111 112244455667777777777778999
Q ss_pred cccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 346 QRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 346 ~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
++.||++.++..++++++++++|+++||+++++.+++|+++++.|+.
T Consensus 247 ~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~ 293 (303)
T PF08449_consen 247 KKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIF 293 (303)
T ss_pred HhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999864
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.93 E-value=5.9e-23 Score=196.94 Aligned_cols=269 Identities=14% Similarity=0.124 Sum_probs=202.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHH
Q 016212 105 KIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVH-TLGN 183 (393)
Q Consensus 105 ~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~ 183 (393)
.+.++...++|.. ..+..|...++.+ |..++++|+.++.+++.+....++.+ ..++++++.....|.+. ...+
T Consensus 10 ~~~~~~~~~iWg~----~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 10 FGALFALYIIWGS----TYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP-LPTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHHHHhh----HHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHH
Confidence 3445555666654 3468898888777 99999999999988776554333222 23466677777777764 4567
Q ss_pred HHhhhhc-cccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC-CccccHHHHHHHHHHHHHH
Q 016212 184 LFTNMSL-GKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT-EVSFNWAGFWSAMASNLTN 261 (393)
Q Consensus 184 ~~~~~al-~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~l~~ 261 (393)
.+.+.+. ++++++.+.++.++.|+++++++.+ +|||++++++.+++++++|+.+...+ +.+.+..|.+++++++++|
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~ 162 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASW 162 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHH
Confidence 7888888 9999999999999999999999986 69999999999999999999887643 3345678999999999999
Q ss_pred HHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHH
Q 016212 262 QSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVS 341 (393)
Q Consensus 262 a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~ 341 (393)
+.+.+..||..+ .++.....+....+.+.+.+.....++.... ..+........+..++.+++.+.+|
T Consensus 163 a~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~l~i~~s~~~~~l~---- 230 (292)
T PRK11272 163 AFGSVWSSRLPL-----PVGMMAGAAEMLAAGVVLLIASLLSGERLTA---LPTLSGFLALGYLAVFGSIIAISAY---- 230 (292)
T ss_pred HHHHHHHHhcCC-----CcchHHHHHHHHHHHHHHHHHHHHcCCcccc---cCCHHHHHHHHHHHHHHHHHHHHHH----
Confidence 999999998531 1344556677777777777765543322110 0001111123344444555666666
Q ss_pred HHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 342 ~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
++.+++.++.+.++..+++|+++.+++++++||++|+.+++|+++++.|++
T Consensus 231 ~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~ 281 (292)
T PRK11272 231 MYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVV 281 (292)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999875
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.93 E-value=4.9e-23 Score=197.75 Aligned_cols=263 Identities=15% Similarity=0.156 Sum_probs=188.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 016212 105 KIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNL 184 (393)
Q Consensus 105 ~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~ 184 (393)
.+...+.+.+|... ....|..+++++ |..+.++|+.++.+++.+... +++.+++..+.++..++.....+.
T Consensus 6 ~l~~l~a~~~Wg~~----~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~ 76 (295)
T PRK11689 6 TLIGLIAILLWSTM----VGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTVG----FPRLRQFPKRYLLAGGLLFVSYEI 76 (295)
T ss_pred hHHHHHHHHHHHHH----HHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHcc----ccccccccHHHHHHHhHHHHHHHH
Confidence 44566667788643 468899999998 999999999999887765421 222222223344444555556667
Q ss_pred Hhhhhcc----ccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCcc-----------ccHH
Q 016212 185 FTNMSLG----KVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVS-----------FNWA 249 (393)
Q Consensus 185 ~~~~al~----~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~-----------~~~~ 249 (393)
+.+.+++ ..+++.+.++.++.|+++.+++++++|||++++++.+++++++|++++..++.+ .+..
T Consensus 77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK11689 77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL 156 (295)
T ss_pred HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence 6666664 467788889999999999999999999999999999999999999988755421 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHH
Q 016212 250 GFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (393)
Q Consensus 250 G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (393)
|++++++++++|+.+.++.||.. ++.++..... ..+.+.+.+.....+... .. .. .......++ ..+.
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~----~~~~~~~~~~---~~~~~~l~~~~~~~~~~~-~~--~~-~~~~~~l~~-~~~~ 224 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYA----RGKNGITLFF---ILTALALWIKYFLSPQPA-MV--FS-LPAIIKLLL-AAAA 224 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc----CCCCchhHHH---HHHHHHHHHHHHHhcCcc-cc--CC-HHHHHHHHH-HHHH
Confidence 99999999999999999999974 2446655432 222333333333322211 11 11 000111122 2234
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 330 s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
+++++.+| ++.+++.+|.+.++..+++|++++++|++++||++|+.+++|+++++.|+.
T Consensus 225 t~~~~~l~----~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~ 283 (295)
T PRK11689 225 MGFGYAAW----NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSL 283 (295)
T ss_pred HHHHHHHH----HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHH
Confidence 45555555 688999999999999999999999999999999999999999999999974
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.92 E-value=5e-23 Score=193.59 Aligned_cols=253 Identities=15% Similarity=0.150 Sum_probs=196.1
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH-HHHHHHHHhhhhccccchhHHHHH
Q 016212 123 NIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLAL-VHTLGNLFTNMSLGKVAVSFTHTI 201 (393)
Q Consensus 123 ~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl-~~~~~~~~~~~al~~~svs~~~ii 201 (393)
.+..|+.+++...|..+++.|+.++.+++.+....+ .++++++..+..+. .+.+++.+++.|+++++++.+.++
T Consensus 5 ~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii 79 (260)
T TIGR00950 5 GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL 79 (260)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence 467899888766589999999999888776554332 23445555555655 467888999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC-ccccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 016212 202 KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE-VSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALD 280 (393)
Q Consensus 202 ~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~ 280 (393)
.++.|+++++++.+++|||++++++.+++++++|+.+...++ .+.+..|+.++++++++|+.+.++.|+..++ .+.+
T Consensus 80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~--~~~~ 157 (260)
T TIGR00950 80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK--EGPE 157 (260)
T ss_pred HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc--CCch
Confidence 999999999999999999999999999999999998876543 3456789999999999999999999997632 2223
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHH
Q 016212 281 NITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVK 360 (393)
Q Consensus 281 ~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk 360 (393)
+.....+....+.+++.|.....+..... + .......++..++.+++++.+| ++.+++.++.+.++..+++
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~s~~~~~~ 228 (260)
T TIGR00950 158 LLQFTGWVLLLGALLLLPFAWFLGPNPQA----L-SLQWGALLYLGLIGTALAYFLW----NKGLTLVDPSAASILALAE 228 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCc----c-hHHHHHHHHHHHHHHHHHHHHH----HHHHhcCCchHHHHHHHHH
Confidence 44555566778888888876554432111 1 0001112333333445555555 6889999999999999999
Q ss_pred HHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 361 RVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 361 ~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
|+++++++++++||++++.+++|+++++.|+
T Consensus 229 pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 229 PLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999986
No 11
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.91 E-value=2.6e-22 Score=193.15 Aligned_cols=270 Identities=17% Similarity=0.228 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 016212 106 IEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVH-TLGNL 184 (393)
Q Consensus 106 l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~ 184 (393)
+...+...+|.... ...|..+++.+ |..+.++|+.++.+.+.+... +++.++ +..+..++.. .....
T Consensus 7 l~~l~~~~~Wg~~~----~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~----~~~~~~---~~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 7 VLALLVVVVWGLNF----VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA----RPKVPL---NLLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHhhhH----HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc----CCCCch---HHHHHHHHHHHHHHHH
Confidence 44556677786443 57798888888 999999999987765543322 122222 2344445543 33455
Q ss_pred Hhhhhccc-cchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC---ccccHHHHHHHHHHHHH
Q 016212 185 FTNMSLGK-VAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE---VSFNWAGFWSAMASNLT 260 (393)
Q Consensus 185 ~~~~al~~-~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~l~ 260 (393)
+++.++++ .|++.+.++.++.|+++.+++++++|||++++++.+++++++|+.+...++ .+.++.|+.++++++++
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~ 154 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFS 154 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHH
Confidence 66778887 799999999999999999999999999999999999999999999876542 22346799999999999
Q ss_pred HHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhc--CCchHHHHHHHHHHHHHHHHHH
Q 016212 261 NQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSA--GLNLKEVYVRSLIAAICYHAYQ 338 (393)
Q Consensus 261 ~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~--~~~~~~l~~~~~~s~v~~~l~~ 338 (393)
|+++.++.||..++. ...+......+....+.+.+.......|+.......+... ......+|..++.+++.+.+|
T Consensus 155 ~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~- 232 (299)
T PRK11453 155 WACGNIFNKKIMSHS-TRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIW- 232 (299)
T ss_pred HHHHHHHHHHHhccc-CccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999999975321 2233344455555555443433333344322110001111 111233455555666666666
Q ss_pred HHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 339 QVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 339 ~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
++.+++.++.+.+....++|++++++|++++||+++..+++|+++++.|++
T Consensus 233 ---~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~ 283 (299)
T PRK11453 233 ---GTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLY 283 (299)
T ss_pred ---HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999875
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.90 E-value=4.1e-21 Score=184.49 Aligned_cols=267 Identities=12% Similarity=0.082 Sum_probs=183.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCC----CC-CHHHHHHHHHHHH
Q 016212 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRP----KV-SSTQLAAILPLAL 177 (393)
Q Consensus 103 ~~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~----~~-~~~~~~~~l~~gl 177 (393)
+..+...+...+|.... ...|.. .+.+ |..+.++|+.++.+.+.++...+.+++ +. +++.+...+..++
T Consensus 8 ~g~~~~l~a~~~wg~~~----~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 8 QGVLLALAAYFIWGIAP----AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV 81 (296)
T ss_pred hHHHHHHHHHHHHHHHH----HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence 44566666666775443 455865 5577 999999999999876655443322111 11 2333333334445
Q ss_pred HHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHHHHHHHH
Q 016212 178 VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMAS 257 (393)
Q Consensus 178 ~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s 257 (393)
..+.++.++++|++++|++.+.++.++.|+++++++++++|||++++++.+++++++|++++..++.+.. .+++++
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~a 157 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGL 157 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHH
Confidence 5677899999999999999999999999999999999999999999999999999999998764433222 467889
Q ss_pred HHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCc-hHHHHHHHHHHHHHHHH
Q 016212 258 NLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLN-LKEVYVRSLIAAICYHA 336 (393)
Q Consensus 258 ~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~-~~~l~~~~~~s~v~~~l 336 (393)
+++|+.|.++.||... + +..+......+....+.+...+. .++.. .. ....... ...++...+.+++++.+
T Consensus 158 a~~~a~~~i~~r~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~--~~~~~~~~~~~~~~~g~~t~i~~~~ 229 (296)
T PRK15430 158 AFSFAFYGLVRKKIAV-E-AQTGMLIETMWLLPVAAIYLFAI---ADSST-SH--MGQNPMSLNLLLIAAGIVTTVPLLC 229 (296)
T ss_pred HHHHHHHHHHHHhcCC-C-CchhHHHHHHHHHHHHHHHHHHH---ccCCc-cc--ccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998632 1 11222333344444443332221 11111 00 0000110 11122222344455555
Q ss_pred HHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 337 YQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 337 ~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
| +..+++.+|.+.+...+++|+++++.|++++||++++.+++|+++++.|+
T Consensus 230 ~----~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~ 280 (296)
T PRK15430 230 F----TAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVAL 280 (296)
T ss_pred H----HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 5 68899999999999999999999999999999999999999999997764
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.90 E-value=1e-20 Score=181.52 Aligned_cols=262 Identities=14% Similarity=0.148 Sum_probs=194.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 016212 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLG 182 (393)
Q Consensus 103 ~~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~ 182 (393)
+....+.+.++.|... ....|+++++++ |..+.++|+.++.+++.+....+ +.+.++++++..+..|++.+..
T Consensus 12 ~~~~~~~la~~~~~~~----~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~ 84 (293)
T PRK10532 12 LPILLLLIAMASIQSG----ASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPW--RLRFAKEQRLPLLFYGVSLGGM 84 (293)
T ss_pred hHHHHHHHHHHHHHhh----HHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHH--hccCCHHHHHHHHHHHHHHHHH
Confidence 3345555555566433 347899999888 99999999999988776554322 2234567777777888888778
Q ss_pred HHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC--C-ccccHHHHHHHHHHHH
Q 016212 183 NLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT--E-VSFNWAGFWSAMASNL 259 (393)
Q Consensus 183 ~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~s~l 259 (393)
+.+.+++++++|++.+.++..+.|+++++++. ||+.. ...+.++++|+.++... + .+.+..|.++++++++
T Consensus 85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~ 158 (293)
T PRK10532 85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGA 158 (293)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHH
Confidence 88899999999999999999999999998873 66554 44566778999876532 2 2345789999999999
Q ss_pred HHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHH
Q 016212 260 TNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQ 339 (393)
Q Consensus 260 ~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~ 339 (393)
+|+.+.++.||..+ +.++... .+...++.+++.|.....++... .+ .......+++.++.+.+.+.+|
T Consensus 159 ~~a~~~v~~r~~~~----~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~----~~-~~~~~~~l~lgv~~t~~~~~l~-- 226 (293)
T PRK10532 159 CWAIYILSGQRAGA----EHGPATV-AIGSLIAALIFVPIGALQAGEAL----WH-WSILPLGLAVAILSTALPYSLE-- 226 (293)
T ss_pred HHHHHHHHHHHHhc----cCCchHH-HHHHHHHHHHHHHHHHHccCccc----CC-HHHHHHHHHHHHHHHHHHHHHH--
Confidence 99999999999752 3455554 45566666777776654332110 00 0001122455556666677676
Q ss_pred HHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 340 VSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 340 ~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
++.+++.++.+.++..+++|++++++|++++||++++.+++|++++++|.
T Consensus 227 --~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~ 276 (293)
T PRK10532 227 --MIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAAS 276 (293)
T ss_pred --HHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999875
No 14
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=7.5e-23 Score=185.25 Aligned_cols=287 Identities=20% Similarity=0.249 Sum_probs=235.6
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHHHHHHHHHH-HHhhcC-----CC--CCCH
Q 016212 99 TTELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKV----YRFPVTVTTCQFGVGTVLVLLL-WTFNLY-----RP--KVSS 166 (393)
Q Consensus 99 ~~~~~~~l~l~~~~~~w~~~s~~~~~~nK~~l~~----f~~P~~lt~~r~~~~~lll~~~-~~~~~~-----~~--~~~~ 166 (393)
+.-..+..+.......+...++++.+.||++++. .+.|.+.++.|.++...++... +...+. .| +++.
T Consensus 20 ~~l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl 99 (347)
T KOG1442|consen 20 PVLEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDL 99 (347)
T ss_pred HHHHHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccH
Confidence 3333445556666677778899999999999995 5789999999999988877644 322111 12 3556
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC---
Q 016212 167 TQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE--- 243 (393)
Q Consensus 167 ~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~--- 243 (393)
+..+..+|+++.+.+++.+.|++++|++++++.+-++++-+|++++.++++|||-+..-..+.++++.|-.+-+..|
T Consensus 100 ~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~ 179 (347)
T KOG1442|consen 100 ATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGST 179 (347)
T ss_pred HHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccccc
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHH
Q 016212 244 VSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEV 323 (393)
Q Consensus 244 ~~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l 323 (393)
....+.|.++++.++++-|+..++.||.....+ -.-..+.+|+++.+.++.+|...+.++.+... ..+.......
T Consensus 180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~--~~iw~lt~ynnv~a~lLflpll~lnge~~~v~---~~~~l~a~~F 254 (347)
T KOG1442|consen 180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVG--DCIWRLTAYNNVNALLLFLPLLILNGEFQAVV---GFPHLPAIKF 254 (347)
T ss_pred CccchhhhHHHHHHHHHHHHHHHhhheeccccc--CeehhhHHHHHHHHHHHHHHHHHHcchHHHHc---CcccchHHHH
Confidence 456799999999999999999999998763211 11258889999999999999887766543221 1112223455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhc
Q 016212 324 YVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSN 390 (393)
Q Consensus 324 ~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g 390 (393)
|..+.++|++++..|+.+.+-++.+||+||.+.++.|-....++++.+.+|.-+..-+.|-.+++.|
T Consensus 255 w~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 255 WILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 6677889999999999999999999999999999999999999999999999998888887777766
No 15
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.87 E-value=7.3e-20 Score=176.31 Aligned_cols=262 Identities=15% Similarity=0.164 Sum_probs=200.1
Q ss_pred HHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchh
Q 016212 121 IFNIYNKQVLK-VYRFPVTVTTCQFGVGTVLVLLLWTFNLYR---PKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVS 196 (393)
Q Consensus 121 ~~~~~nK~~l~-~f~~P~~lt~~r~~~~~lll~~~~~~~~~~---~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs 196 (393)
+.+..+..+-+ +.+.|.+-+++-++.-.++.......|..+ .+.-++++++++.+|++...++.+.+.|++|++++
T Consensus 27 ~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvt 106 (334)
T PF06027_consen 27 GTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVT 106 (334)
T ss_pred hHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHh
Confidence 33444454444 366787777776665444333222222211 11235667778889999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc---------cccHHHHHHHHHHHHHHHHHHHH
Q 016212 197 FTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV---------SFNWAGFWSAMASNLTNQSRNVL 267 (393)
Q Consensus 197 ~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~l~~a~~~vl 267 (393)
.++++.++..+++++++++++|+|+++.+++|++++++|++++...|. +....|.++++.++++||+++++
T Consensus 107 S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~ 186 (334)
T PF06027_consen 107 SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL 186 (334)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998776542 23488999999999999999999
Q ss_pred HHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016212 268 SKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQR 347 (393)
Q Consensus 268 ~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~ 347 (393)
.|+..+ +.+..+......++++++..+.....|..++... .++.. .....+.-+++.+......-..++.
T Consensus 187 ~E~~v~----~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~-----~w~~~-~~~~~v~~~~~lf~~y~l~p~~l~~ 256 (334)
T PF06027_consen 187 EEKLVK----KAPRVEFLGMLGLFGFIISGIQLAILERSGIESI-----HWTSQ-VIGLLVGYALCLFLFYSLVPIVLRM 256 (334)
T ss_pred HHHhcc----cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc-----CCChh-hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999873 4577888999999999999888887776554322 22222 2222223333333333333567899
Q ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 348 VSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 348 ~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
.||+..++......++++++++++||+++++..++|.++++.|+-
T Consensus 257 ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~v 301 (334)
T PF06027_consen 257 SSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFV 301 (334)
T ss_pred CccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhh
Confidence 999999999889999999999999999999999999999999974
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.86 E-value=8.6e-20 Score=174.04 Aligned_cols=258 Identities=13% Similarity=0.130 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhh--cC-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchh
Q 016212 120 IIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFN--LY-RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVS 196 (393)
Q Consensus 120 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~--~~-~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs 196 (393)
...+..+|...++-+ +. .+.+.....+++.+....+ .. .+..+++.+...+..++....++.+.+.|+++.+++
T Consensus 14 a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (281)
T TIGR03340 14 AGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVG 90 (281)
T ss_pred HHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 355677886666522 32 3555555555554433322 11 122334444455555666778899999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc-cccHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016212 197 FTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV-SFNWAGFWSAMASNLTNQSRNVLSKKVMVNK 275 (393)
Q Consensus 197 ~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~-~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~ 275 (393)
....+.++.|+++++++++++|||++++++.+++++++|+.+...++. +.+..|+.++++++++|+.|.++.|+..+
T Consensus 91 ~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~-- 168 (281)
T TIGR03340 91 LVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAAL-- 168 (281)
T ss_pred hhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccccc--
Confidence 999999999999999999999999999999999999999998764432 34567888999999999999999887532
Q ss_pred cCCCChh-hHHHHHHHHHHHHH-HHHHHH---hcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 016212 276 EEALDNI-TLFSIITVMSFILM-IPVTLI---MEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSP 350 (393)
Q Consensus 276 ~~~~~~~-~l~~~~~~~s~l~l-~p~~~~---~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~ 350 (393)
+.++. ....+.. .+.+.. .|.... .++.... ..........+..++.+++++.+| ++.+++.++
T Consensus 169 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~l~~~l~----~~al~~~~a 237 (281)
T TIGR03340 169 --GVPAFYSALGYLG-IGFLAMGWPFLLLYLKRHGRSMF----PYARQILPSATLGGLMIGGAYALV----LWAMTRLPV 237 (281)
T ss_pred --chhcccccHHHHH-HHHHHHHHHHHHHHHHHhccchh----hhHHHHHHHHHHHHHHHHHHHHHH----HHHHhhCCc
Confidence 22221 1111211 111111 222221 1211100 000111122334444455555555 688999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 351 VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 351 ~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
.+.+...++.|++++++|++++||+++..+++|+++++.|+++
T Consensus 238 ~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 238 ATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred eEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999864
No 17
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.85 E-value=5e-20 Score=162.38 Aligned_cols=268 Identities=16% Similarity=0.224 Sum_probs=223.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 016212 111 LMGLWYFFNIIFNIYNKQVLKV--YRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNM 188 (393)
Q Consensus 111 ~~~~w~~~s~~~~~~nK~~l~~--f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~ 188 (393)
.++.|++.++.+++.||++++. |+..+.+.+.|-.+..+.+......+.. +.+..+.+.++|.+++.....+....
T Consensus 10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~--~fR~t~aK~WfpiSfLLv~MIyt~SK 87 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLV--EFRLTKAKKWFPISFLLVVMIYTSSK 87 (309)
T ss_pred HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHh--heehhhhhhhcCHHHHHHHHHHhccc
Confidence 4578889999999999999995 6656888899999888777666555532 23356678889999999999999999
Q ss_pred hccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCcc--------ccHHHHHHHHHHHHH
Q 016212 189 SLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVS--------FNWAGFWSAMASNLT 260 (393)
Q Consensus 189 al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~s~l~ 260 (393)
+++|++++.+++.|.++.+.++..+.+++|.|.+.....+.++.+.......++|.+ .| .|++|...+.+.
T Consensus 88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls 166 (309)
T COG5070 88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS 166 (309)
T ss_pred ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence 999999999999999999999999999999999999999999999999999988863 34 499999999999
Q ss_pred HHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHH
Q 016212 261 NQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQV 340 (393)
Q Consensus 261 ~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~ 340 (393)
.+.+-...|+..+ -.+....+.++|.++.+..+++...++.|+++... ..+ +.. ......+..+|++.+...+.
T Consensus 167 saafVL~mrkri~--ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n-~an--nl~-~d~l~am~ISgl~svgiSy~ 240 (309)
T COG5070 167 SAAFVLIMRKRIK--LTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN-LAN--NLS-VDSLMAMFISGLCSVGISYC 240 (309)
T ss_pred HHHHHHHHHHhhc--ccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch-hhc--CCC-hHHHHHHHHHHHHHhhhhhc
Confidence 9999988887542 13344568889999999999999999999876431 111 111 12244667899999988888
Q ss_pred HHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHh
Q 016212 341 SYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITL 387 (393)
Q Consensus 341 ~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~li 387 (393)
+-|+++.+|.+++|+++.+++....+.|.++|||+.+...+..+.+-
T Consensus 241 saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillG 287 (309)
T COG5070 241 SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLG 287 (309)
T ss_pred cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHH
Confidence 88999999999999999999999999999999999999988877663
No 18
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.3e-20 Score=167.38 Aligned_cols=252 Identities=17% Similarity=0.162 Sum_probs=201.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHH
Q 016212 133 YRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLL 212 (393)
Q Consensus 133 f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~ll 212 (393)
|.+...+.++|..+..+..-+....+. +.+.++..-+.+...++-+.+.++.+|.|++|+|.++..+-|++.|+-++++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir~-~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIRK-KTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeecc-cccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 556788889999988887644333332 2334444556677778888889999999999999999999999999999999
Q ss_pred HHHHhCCCCCHHHHHHHHHHhhhheeeecCCc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHH
Q 016212 213 SAMFLGEFPTLWVVGSLIPIMGGVALASVTEV-------SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLF 285 (393)
Q Consensus 213 s~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~ 285 (393)
+.++.+++++|+++++++.+++||++....|. .....|-++.+++....++....++|+-.. .+-+.-.++
T Consensus 129 GVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~--yq~~g~~MM 206 (337)
T KOG1580|consen 129 GVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRAS--YQRTGTSMM 206 (337)
T ss_pred ehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHh--hccCchhhH
Confidence 99999999999999999999999999876542 223679999999999999999999986432 345667899
Q ss_pred HHHHHHHHHHHHHHHHHhc-CccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHH
Q 016212 286 SIITVMSFILMIPVTLIME-GVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVV 364 (393)
Q Consensus 286 ~~~~~~s~l~l~p~~~~~e-~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~ 364 (393)
.|+++.+.+.+....++.+ .+++.- +.+ . .+.++..+...+++..+.+...|..+...+|++-|++++.++.++
T Consensus 207 ~~~NlwStL~Lg~g~lfTGElweF~y-F~~--R--hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFT 281 (337)
T KOG1580|consen 207 FYTNLWSTLYLGAGLLFTGELWEFFY-FVQ--R--HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFT 281 (337)
T ss_pred HHHHHHHHHHhhhhheehhhHHHHHH-HHH--h--ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHH
Confidence 9999999998877665443 232211 111 1 123444566667777778888899999999999999999999999
Q ss_pred HHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 365 IVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 365 il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
++.|+++|+++++..|++|.++++.++.
T Consensus 282 il~SVllf~npls~rQwlgtvlVF~aL~ 309 (337)
T KOG1580|consen 282 ILISVLLFNNPLSGRQWLGTVLVFSALT 309 (337)
T ss_pred HHHHHHHhcCcCcHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998874
No 19
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=3.3e-18 Score=157.83 Aligned_cols=285 Identities=14% Similarity=0.166 Sum_probs=223.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 016212 102 LSRKIEVLLLMGLWYFFNIIFNIYNKQVLK--------VYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAIL 173 (393)
Q Consensus 102 ~~~~l~l~~~~~~w~~~s~~~~~~nK~~l~--------~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l 173 (393)
..+.+.+.+++..-+...+...++...+.+ .|.+|.++.+.|-.++.++...+..... .+...++.++.+.
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k-~~~~~~apl~~y~ 87 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWK-KELSGVAPLYKYS 87 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccc-ccCCCCCchhHHh
Confidence 344455555554444555556666555544 3678999999999988887754433222 2334466778888
Q ss_pred HHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc---------
Q 016212 174 PLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV--------- 244 (393)
Q Consensus 174 ~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~--------- 244 (393)
..++...++..+.+.|++|++.++..+.|++.-+-+++.+.++.++|++..+++...++.+|+.+....+.
T Consensus 88 ~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~ 167 (327)
T KOG1581|consen 88 LISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGR 167 (327)
T ss_pred HHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCC
Confidence 88999999999999999999999999999999999999999999999999999999999999998765321
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHH
Q 016212 245 SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVY 324 (393)
Q Consensus 245 ~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~ 324 (393)
...+.|+.+...+.+.+++.+..++++.++ .++++.++++++++++++...... +..+.....-.+-.. .....
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~--~k~s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~av~F~~~---hp~~~ 241 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKK--YKVSSLHMMFGVNLFSAILNGTYL-ILQGHLLPAVSFIKE---HPDVA 241 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhcc--CCccHhHHHHHHHHHHHHHHHHhh-hcCCCCchHHHHHHc---ChhHH
Confidence 235889999999999999999999999863 689999999999999988776652 332221111111111 12344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 325 VRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 325 ~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
..+++-+.++...|...|..+++.++++..+.++.++.++++++.+.||++++..|++|..++++|+++
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 456667777777888889999999999999999999999999999999999999999999999999863
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.79 E-value=3.2e-16 Score=148.73 Aligned_cols=256 Identities=18% Similarity=0.215 Sum_probs=177.4
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHH
Q 016212 122 FNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHT 200 (393)
Q Consensus 122 ~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~-~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~i 200 (393)
.....|...++...+....+.|...+..........+.. +.+..+......+..++.......+++.++++++++.+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (292)
T COG0697 22 SFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASL 101 (292)
T ss_pred HHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence 334556555553324666666888887764333332211 1111122234445555567778999999999999999999
Q ss_pred HhhhhHHHHHHHHH-HHhCCCCCHHHHHHHHHHhhhheeeecCCcccc---HHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 016212 201 IKATEPFFSVLLSA-MFLGEFPTLWVVGSLIPIMGGVALASVTEVSFN---WAGFWSAMASNLTNQSRNVLSKKVMVNKE 276 (393)
Q Consensus 201 i~s~~Pift~lls~-l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~---~~G~~~~l~s~l~~a~~~vl~k~~~~~~~ 276 (393)
+.++.|+++.+++. ++++||++++++.+++.++.|+.++..++...+ ..|..+++.++++++++.++.|+..
T Consensus 102 l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~---- 177 (292)
T COG0697 102 IIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS---- 177 (292)
T ss_pred HHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 99999999999997 777999999999999999999999998765443 5899999999999999999999864
Q ss_pred CCCChhhHHH-HHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhH
Q 016212 277 EALDNITLFS-IITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSV 355 (393)
Q Consensus 277 ~~~~~~~l~~-~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv 355 (393)
+.++..... +..........+.. .+... .+... .......+..++.+++++.++ +..+++.++...+.
T Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~---~~~~~~~~~g~~~~~i~~~~~----~~~~~~~~~~~~~~ 246 (292)
T COG0697 178 -RLGPVTLALLLQLLLALLLLLLFF--LSGFG-APILS---RAWLLLLYLGVFSTGLAYLLW----YYALRLLGASLVAL 246 (292)
T ss_pred -CCChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCH---HHHHHHHHHHHHHHHHHHHHH----HHHHHhcCchHHHH
Confidence 234544444 33332222222222 11111 00000 001112233333334444444 68899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 356 GNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 356 ~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
.....++++++.+++++||+++..+++|++++++|+.
T Consensus 247 ~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~ 283 (292)
T COG0697 247 LSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL 283 (292)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988864
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.78 E-value=1.5e-16 Score=149.53 Aligned_cols=244 Identities=14% Similarity=0.085 Sum_probs=160.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcC-C------CCCCHHH-HHHHHHHH
Q 016212 105 KIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-R------PKVSSTQ-LAAILPLA 176 (393)
Q Consensus 105 ~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~-~------~~~~~~~-~~~~l~~g 176 (393)
.+..++...+|... .+..|. ..+.+ |..+.++|+.++.+++.+....+.+ + ++.++++ ...+...|
T Consensus 4 ~~~~i~a~~~wg~~----~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 4 IIVSLLASFLFGYM----YYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG 77 (256)
T ss_pred HHHHHHHHHHHHHH----HHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence 34455556677544 457787 45666 9999999999998776544322111 0 1111222 33456667
Q ss_pred HHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHHHHHHH
Q 016212 177 LVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMA 256 (393)
Q Consensus 177 l~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 256 (393)
++.+.+..++++|+++++++.++++.++.|+++++++++++|||++++++++++++++|+++...++.+.+ .++++
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~ 153 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALV 153 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHH
Confidence 77788899999999999999999999999999999999999999999999999999999997754332222 35788
Q ss_pred HHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHH
Q 016212 257 SNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHA 336 (393)
Q Consensus 257 s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l 336 (393)
++++|+.|.+..||..+ .+..+.... ......+..+... .+++.. ..... ....+..++...+.+++++.+
T Consensus 154 aa~~~a~~~i~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~~l~~~g~~t~i~~~l 224 (256)
T TIGR00688 154 LAFSFTAYGLIRKALKN-----TDLAGFCLE-TLSLMPVAIYYLL-QTDFAT-VQQTN-PFPIWLLLVLAGLITGTPLLA 224 (256)
T ss_pred HHHHHHHHHHHHhhcCC-----CCcchHHHH-HHHHHHHHHHHHH-HhccCc-ccccC-chhHHHHHHHHHHHHHHHHHH
Confidence 99999999999998531 122222111 1111111111111 111110 00000 110111222222334555555
Q ss_pred HHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHh
Q 016212 337 YQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMF 371 (393)
Q Consensus 337 ~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~ 371 (393)
+ ...+++.++.+.+...+++|++++++++++
T Consensus 225 ~----~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 225 F----VIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred H----HHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 5 588999999999999999999999999874
No 22
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.75 E-value=2.7e-17 Score=142.28 Aligned_cols=143 Identities=28% Similarity=0.499 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc---cCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcC--Cc-hHHH
Q 016212 250 GFWSAMASNLTNQSRNVLSKKVMVNK---EEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAG--LN-LKEV 323 (393)
Q Consensus 250 G~~~~l~s~l~~a~~~vl~k~~~~~~---~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~--~~-~~~l 323 (393)
|++++++|+++.++++++.|+.++++ +++.|+.+++.|+++.++++++|.+++.|+++......+... .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999998763 368999999999999999999999999998764433222111 11 2355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 324 YVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 324 ~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
+..++.+|+.++++|++.|.+++++||+++++.+++|+++.+++|+++|||++|..+++|+++++.|..
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~ 149 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVL 149 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHh
Confidence 667788999999999999999999999999999999999999999999999999999999999999975
No 23
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.3e-16 Score=144.72 Aligned_cols=282 Identities=12% Similarity=0.137 Sum_probs=219.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CC-chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 016212 104 RKIEVLLLMGLWYFFNIIFNIYNKQVLKV--YR-FPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHT 180 (393)
Q Consensus 104 ~~l~l~~~~~~w~~~s~~~~~~nK~~l~~--f~-~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~ 180 (393)
++.+..+++...++.-....+...++++. |. +-|.+|++|+++-..+.+... ...+++.....++.+..++++..
T Consensus 40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~--~~~~~k~r~iP~rtY~~la~~t~ 117 (367)
T KOG1582|consen 40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL--QLIQTKRRVIPWRTYVILAFLTV 117 (367)
T ss_pred hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE--EeecccceecchhHhhhhHhhhh
Confidence 45566666666666666777788888884 54 669999999997655443321 11233434455777888899888
Q ss_pred HHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC----ccccHHHHHHHHH
Q 016212 181 LGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE----VSFNWAGFWSAMA 256 (393)
Q Consensus 181 ~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~----~~~~~~G~~~~l~ 256 (393)
+.+.++|-++.|++.+...+.|++..+-+++.+.++.|+|+++..+.+..+...|.++....| .++|..|+.+.-.
T Consensus 118 gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsg 197 (367)
T KOG1582|consen 118 GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISG 197 (367)
T ss_pred hccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999988766 3578899999999
Q ss_pred HHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCc-cchhhhhhhcCCchHHHHHHHHHHHHHHH
Q 016212 257 SNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGV-TFTPAYLQSAGLNLKEVYVRSLIAAICYH 335 (393)
Q Consensus 257 s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~-~~~~~~~~~~~~~~~~l~~~~~~s~v~~~ 335 (393)
+.++.|.-.-++++.|+.. +-+..++.+|...+++++++..+...++. ...+...+ .. ...+-..+.-+.+++
T Consensus 198 ALl~DA~iGNvQEk~m~~~--~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcae-hp---~~tyGy~~~~s~~gy 271 (367)
T KOG1582|consen 198 ALLADAVIGNVQEKAMKMN--PASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAE-HP---VRTYGYAFLFSLAGY 271 (367)
T ss_pred HHHHHHHhhHHHHHHHhhC--CCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHh-Cc---HhHHHHHHHHHHHhH
Confidence 9999999999999888543 33457888899999998887777655432 21121222 11 112223334444555
Q ss_pred HHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 336 AYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 336 l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
+.+......++..++.++..+++.++.+++++|+++|..|+|....-|..+++.|+||
T Consensus 272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~L 329 (367)
T KOG1582|consen 272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYL 329 (367)
T ss_pred hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHh
Confidence 5555667889999999999999999999999999999999999999999999999986
No 24
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.73 E-value=8.1e-17 Score=152.37 Aligned_cols=221 Identities=20% Similarity=0.217 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc--
Q 016212 167 TQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV-- 244 (393)
Q Consensus 167 ~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~-- 244 (393)
+..+..+..+.+....++.+|.|+.+++++..+++.+++-+||..++.++.+||+++.|.+++.+.++|++++..+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 445556666777888999999999999999999999999999999999999999999999999999999999998743
Q ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCC
Q 016212 245 ------SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGL 318 (393)
Q Consensus 245 ------~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~ 318 (393)
+-...|.++++++++.||+|.++.||...++++++|--.++.|..++..+++.|..++.+........+....
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~- 315 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSST- 315 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCc-
Confidence 2237899999999999999999999987665568888889999999999999988877664433222222111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 319 NLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 319 ~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
++...++.+++.-++-.+.+.+..-.++|++..+...+..+++++..+++-|.++|+..++|.+.+++|.
T Consensus 316 ---q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 316 ---QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred ---eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 1111112223333333344467788999999999999999999999999999999999999999998874
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.70 E-value=1.4e-14 Score=138.74 Aligned_cols=259 Identities=17% Similarity=0.172 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-HHHHHHHHHHHHHHHHHHH
Q 016212 106 IEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVS-STQLAAILPLALVHTLGNL 184 (393)
Q Consensus 106 l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~-~~~~~~~l~~gl~~~~~~~ 184 (393)
+...+.+++|.... +..|.+. +.+.++.. ++.++.+++..+....+ .++.+ ++.+..-+..|+..+.+++
T Consensus 4 l~~lia~~~wGs~g----~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~-~~~~~~~~~~~~g~l~G~~w~ig~~ 74 (290)
T TIGR00776 4 LIALIPALFWGSFV----LINVKIG-GGPYSQTL---GTTFGALILSIAIAIFV-LPEFWALSIFLVGLLSGAFWALGQI 74 (290)
T ss_pred HHHHHHHHHHhhhH----HHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHh-CCcccccHHHHHHHHHHHHHHhhhh
Confidence 34455667776554 3456554 45534443 56666665543322211 22222 3444445555666888899
Q ss_pred HhhhhccccchhHHHHHhh-hhHHHHHHHHHHHhCCCCCHHH----HHHHHHHhhhheeeecCCcc-------cc-HHHH
Q 016212 185 FTNMSLGKVAVSFTHTIKA-TEPFFSVLLSAMFLGEFPTLWV----VGSLIPIMGGVALASVTEVS-------FN-WAGF 251 (393)
Q Consensus 185 ~~~~al~~~svs~~~ii~s-~~Pift~lls~l~l~ek~~~~~----~~sl~l~~~Gv~l~~~~~~~-------~~-~~G~ 251 (393)
+++.+.++++++.+..+-. +.++++.+.+.+++|||.+.++ +++++++++|+.+....+.+ .+ ..|+
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi 154 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGI 154 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHH
Confidence 9999999999999988888 8889999999999999999999 99999999999998754221 33 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCChhhH---HHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHH
Q 016212 252 WSAMASNLTNQSRNVLSKKVMVNKEEALDNITL---FSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL 328 (393)
Q Consensus 252 ~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l---~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~ 328 (393)
+++++++++|+.+.+..|+. +.|+.+. +.+....+..+..+.. .+. .+. . ....+..++
T Consensus 155 ~~~l~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~---~~~--~-----~~~~~~~~~ 216 (290)
T TIGR00776 155 LLLLMSTIGYLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA---KPL--K-----KYAILLNIL 216 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHH--hcc---cch--H-----HHHHHHHHH
Confidence 99999999999999999974 3567666 4443333333332222 110 011 0 011111222
Q ss_pred HHHHHHHHHHHHHHHHhc-ccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhh----hhHHHhhhccC
Q 016212 329 IAAICYHAYQQVSYMILQ-RVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINA----FGMITLHSNLH 392 (393)
Q Consensus 329 ~s~v~~~l~~~~~~~~l~-~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~----iG~~lil~g~~ 392 (393)
.|+.+...+...+...+ +.++.++++....+++.+++.+++++||+.++.|+ +|+++++.|+-
T Consensus 217 -~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~ 284 (290)
T TIGR00776 217 -PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN 284 (290)
T ss_pred -HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence 33333222223356777 99999999999999999999999999999999999 99999998863
No 26
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.68 E-value=3.7e-14 Score=127.92 Aligned_cols=244 Identities=17% Similarity=0.197 Sum_probs=183.8
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhh
Q 016212 125 YNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKAT 204 (393)
Q Consensus 125 ~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~ 204 (393)
+.|.++...+ |.-.+++|..++.++++..++-. |.+.++++++..+..|...+..|++.+.+++.+|.+.+..+-.+
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPw--r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~ 106 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALFRPW--RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFT 106 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHhhHH--HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence 6788888777 89999999999999887665432 34567888899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC---ccccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCh
Q 016212 205 EPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE---VSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDN 281 (393)
Q Consensus 205 ~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~ 281 (393)
-|+.+++++ .+|.. ..+.+.+.+.|..+..-.. .+.|..|..+++.+..||++|.+..||.- ...+.
T Consensus 107 GPL~vA~~~----sRr~~--d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g----~~~~g 176 (292)
T COG5006 107 GPLAVALLS----SRRLR--DFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG----RAEHG 176 (292)
T ss_pred cHHHHHHHh----ccchh--hHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc----ccCCC
Confidence 999887654 34433 4444555667776554322 45689999999999999999999999863 23455
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHH
Q 016212 282 ITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKR 361 (393)
Q Consensus 282 ~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~ 361 (393)
.+-..+-+.++.++.+|+-....+..+. ++......+...++-+++-|. .....+++.++-++++...++|
T Consensus 177 ~~g~a~gm~vAaviv~Pig~~~ag~~l~-----~p~ll~laLgvavlSSalPYs----LEmiAL~rlp~~~F~~LlSLeP 247 (292)
T COG5006 177 TAGVAVGMLVAALIVLPIGAAQAGPALF-----SPSLLPLALGVAVLSSALPYS----LEMIALRRLPARTFGTLLSLEP 247 (292)
T ss_pred chHHHHHHHHHHHHHhhhhhhhcchhhc-----ChHHHHHHHHHHHHhcccchH----HHHHHHhhCChhHHHHHHHhhH
Confidence 6667788888888888987644443221 111111111112222223333 3457799999999999999999
Q ss_pred HHHHHHHHHhcCcccchhhhhhHHHhhhc
Q 016212 362 VVVIVSSVMFFRTPVSAINAFGMITLHSN 390 (393)
Q Consensus 362 v~~il~s~i~fge~~s~~~~iG~~lil~g 390 (393)
.++.+.|++++||.+|+.|++|++.++.+
T Consensus 248 a~aAl~G~i~L~e~ls~~qwlaI~~ViaA 276 (292)
T COG5006 248 ALAALSGLIFLGETLTLIQWLAIAAVIAA 276 (292)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999998765
No 27
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.65 E-value=2.2e-14 Score=133.54 Aligned_cols=213 Identities=15% Similarity=0.214 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc-
Q 016212 166 STQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV- 244 (393)
Q Consensus 166 ~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~- 244 (393)
+++..++..-++++.+.+.+.+.++++++.+++++++.+..+++++++++++|+|++.++|.++++.++|+.+...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 3445556666788999999999999999999999999999999999999999999999999999999999999864321
Q ss_pred ----------------cccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccc
Q 016212 245 ----------------SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTF 308 (393)
Q Consensus 245 ----------------~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~ 308 (393)
.....|+++.++++++.++..++.+|.+++++ .+...........|.++.+......|+...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~ 171 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAI 171 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 11268999999999999999999999997643 333333334445555555555444443222
Q ss_pred hh-hhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHh
Q 016212 309 TP-AYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITL 387 (393)
Q Consensus 309 ~~-~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~li 387 (393)
.+ ..++ +++. ..+..++..++.+.+. -.++++.+...-+....+..+++.+.++++||.++|....+|..++
T Consensus 172 ~~~g~f~--G~~~-~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 172 SESGFFH--GYSW-WVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred ccCCchh--hcch-HHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 11 1222 3332 2344455556655554 3678999999999999999999999999999999999999998764
No 28
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.61 E-value=2.7e-16 Score=142.52 Aligned_cols=265 Identities=16% Similarity=0.164 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHHHh
Q 016212 108 VLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPK-VSSTQLAAILPLALVHTLGNLFT 186 (393)
Q Consensus 108 l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~-~~~~~~~~~l~~gl~~~~~~~~~ 186 (393)
+.+..+. |.++..+.+..|.+.+ .|....-.|+++-.++.+++...... +- -++.+-++++..|+....+....
T Consensus 40 l~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~-~v~gp~g~R~~LiLRg~mG~tgvmlm 114 (346)
T KOG4510|consen 40 LLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQ-PVIGPEGKRKWLILRGFMGFTGVMLM 114 (346)
T ss_pred ceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEee-eeecCCCcEEEEEeehhhhhhHHHHH
Confidence 3344445 5666666666665542 47777777766555544433222211 10 01111234556688888888888
Q ss_pred hhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC--------------ccccHHHHH
Q 016212 187 NMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE--------------VSFNWAGFW 252 (393)
Q Consensus 187 ~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~--------------~~~~~~G~~ 252 (393)
++|++|++.+.+.++..++|.||.++++.++||+++....++.+..+.||+++..+. .+.+..|-+
T Consensus 115 yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~ 194 (346)
T KOG4510|consen 115 YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTV 194 (346)
T ss_pred HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchH
Confidence 899999999999999999999999999999999999999999999999999987542 122356888
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHH
Q 016212 253 SAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAI 332 (393)
Q Consensus 253 ~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v 332 (393)
.++.+++.-+.-.++.|++- ++.|.+....|...++.+..+........+++... +-+. ..++..|+
T Consensus 195 aai~s~lf~asvyIilR~iG----k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~c-----gkdr----~l~~~lGv 261 (346)
T KOG4510|consen 195 AAISSVLFGASVYIILRYIG----KNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHC-----GKDR----WLFVNLGV 261 (346)
T ss_pred HHHHhHhhhhhHHHHHHHhh----ccccEEEEehHHHHHHHHHHHHHHhhccceecCcc-----ccce----EEEEEehh
Confidence 88888888888888888753 46677766677777776666555544444433211 1111 11233455
Q ss_pred HHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhc
Q 016212 333 CYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSN 390 (393)
Q Consensus 333 ~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g 390 (393)
+++..|+...+.+++--+-..++..+...+++.+..+++|||.++++++.|+++++++
T Consensus 262 fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS 319 (346)
T KOG4510|consen 262 FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSS 319 (346)
T ss_pred hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehh
Confidence 6666666556777777677778888999999999999999999999999999998865
No 29
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.57 E-value=2.1e-14 Score=130.91 Aligned_cols=256 Identities=14% Similarity=0.158 Sum_probs=189.5
Q ss_pred HHHHhcCCc-hHHHHHHHHHHHHHHHHHHH-HhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhccc-cchhHHHHHhh
Q 016212 127 KQVLKVYRF-PVTVTTCQFGVGTVLVLLLW-TFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGK-VAVSFTHTIKA 203 (393)
Q Consensus 127 K~~l~~f~~-P~~lt~~r~~~~~lll~~~~-~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~-~svs~~~ii~s 203 (393)
..+.+..|. -..+|+.||++-+.-.++.. .....+++.+. +.+...-.++...+.++|+++++ +|.+...++|+
T Consensus 23 E~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kipl---k~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRs 99 (330)
T KOG1583|consen 23 ELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPL---KDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRS 99 (330)
T ss_pred HHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCch---hhhheehheeeeeeeeccceeeecccceEEEEEec
Confidence 344444442 38899999997766544332 11111444444 33444456667778999999998 89999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC---Cc-------------c-cc--HHHHHHHHHHHHHHHHH
Q 016212 204 TEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT---EV-------------S-FN--WAGFWSAMASNLTNQSR 264 (393)
Q Consensus 204 ~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~---~~-------------~-~~--~~G~~~~l~s~l~~a~~ 264 (393)
-.++.++++++++.|+|++.+++.+++.+.+|+.+.... |. + +. ..|+.+...+.+..|.-
T Consensus 100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m 179 (330)
T KOG1583|consen 100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM 179 (330)
T ss_pred CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997642 11 0 11 46888889999999999
Q ss_pred HHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhh--hh-------cCCchHHHHHHHHHHHHHHH
Q 016212 265 NVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYL--QS-------AGLNLKEVYVRSLIAAICYH 335 (393)
Q Consensus 265 ~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~--~~-------~~~~~~~l~~~~~~s~v~~~ 335 (393)
.+++++..++.+ -++-+.++|+...+.. ..++..+.-...+.. .+ .+...+..+..++.+++.-+
T Consensus 180 giyqE~~Y~kyG--Kh~~EalFytH~LsLP----~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy 253 (330)
T KOG1583|consen 180 GIYQETTYQKYG--KHWKEALFYTHFLSLP----LFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQY 253 (330)
T ss_pred HHHHHHHHHHhc--CChHHHHHHHHHhccc----hHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHH
Confidence 999999887654 3677888999888644 444443322221111 11 12223344555667777666
Q ss_pred HHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 336 AYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 336 l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
...-..|.+..+++++|.+++-++++-+..++|++.|.+++++.+++|.++++.|-
T Consensus 254 ~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt 309 (330)
T KOG1583|consen 254 FCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGT 309 (330)
T ss_pred HHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHH
Confidence 66667788899999999999999999999999999999999999999999999884
No 30
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.56 E-value=2.5e-13 Score=124.14 Aligned_cols=276 Identities=14% Similarity=0.133 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHHHHHh-------cCCchHHHHHHHHHHHHHHHHHHHHhhcC--CCC--------CC----HHHHHHH
Q 016212 114 LWYFFNIIFNIYNKQVLK-------VYRFPVTVTTCQFGVGTVLVLLLWTFNLY--RPK--------VS----STQLAAI 172 (393)
Q Consensus 114 ~w~~~s~~~~~~nK~~l~-------~f~~P~~lt~~r~~~~~lll~~~~~~~~~--~~~--------~~----~~~~~~~ 172 (393)
+....+...++..||.-+ .|+.|+.-+..-|..-.+.+..+...+.+ .+. .+ .-.....
T Consensus 10 imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lf 89 (372)
T KOG3912|consen 10 IMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLF 89 (372)
T ss_pred hhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCccee
Confidence 334455566788898876 26667665555443332333333333222 110 01 1122445
Q ss_pred HHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc--------
Q 016212 173 LPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV-------- 244 (393)
Q Consensus 173 l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~-------- 244 (393)
++-+++-..+..+.+.++.+++++.+|+++....+|+.+++..+++.+++.++|+++..+..|++++...|.
T Consensus 90 l~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~ 169 (372)
T KOG3912|consen 90 LPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYT 169 (372)
T ss_pred cChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcc
Confidence 677888888888888999999999999999999999999999999999999999999999999999876542
Q ss_pred --cccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhc----Cccch--hhh-hhh
Q 016212 245 --SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIME----GVTFT--PAY-LQS 315 (393)
Q Consensus 245 --~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e----~~~~~--~~~-~~~ 315 (393)
+.-..|..+.+++-+..|.+.++.+|.+++ .+++|.+...|..+++.+++......+. +..+. +.. +++
T Consensus 170 d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~--~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD 247 (372)
T KOG3912|consen 170 DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKK--SNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED 247 (372)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHhhhhh--ccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh
Confidence 223689999999999999999999998854 5899999999999999655443333221 11110 000 111
Q ss_pred -------cCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhh
Q 016212 316 -------AGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLH 388 (393)
Q Consensus 316 -------~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil 388 (393)
.+. ...+++.+...-++-.++|.+...+.+..|++|-++...++..+.-++++..+.|.++..|+.|.++.+
T Consensus 248 ~~~~~~~~~e-~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi 326 (372)
T KOG3912|consen 248 WGDAFAALQE-SPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILI 326 (372)
T ss_pred HHHHHHHhcC-CchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 111 122333344444444557878888999999999999999999999999999999999999999999998
Q ss_pred hccC
Q 016212 389 SNLH 392 (393)
Q Consensus 389 ~g~~ 392 (393)
.|+.
T Consensus 327 ~Gi~ 330 (372)
T KOG3912|consen 327 MGII 330 (372)
T ss_pred HHHH
Confidence 8863
No 31
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.48 E-value=6.5e-11 Score=109.75 Aligned_cols=266 Identities=16% Similarity=0.146 Sum_probs=180.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH-hhcC----CCCCCHHHHHHHHHHHHH
Q 016212 104 RKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWT-FNLY----RPKVSSTQLAAILPLALV 178 (393)
Q Consensus 104 ~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~-~~~~----~~~~~~~~~~~~l~~gl~ 178 (393)
+.+.....-+.|+ .+.++.|. ++..+ +..+...|..-+..++..... .|.. +...+++.+..+...+++
T Consensus 8 Gil~~l~Ay~lwG----~lp~y~kl-l~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 8 GILLALLAYLLWG----LLPLYFKL-LEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred hhHHHHHHHHHHH----HHHHHHHH-HccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 3343444444554 34456664 44455 678888898887776543322 2211 111234455566677777
Q ss_pred HHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCccccHHHHHHHHHHH
Q 016212 179 HTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASN 258 (393)
Q Consensus 179 ~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 258 (393)
.+.+...+.+|...-.+=.++.=-...|++.++++.+|+|||+++.+++++++..+||..-.....+++|..+.+ +
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a 157 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----A 157 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----H
Confidence 888889999999998888888889999999999999999999999999999999999999888878888875444 5
Q ss_pred HHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHH
Q 016212 259 LTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQ 338 (393)
Q Consensus 259 l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~ 338 (393)
++|+.|..+-|+. ++|+.+=...=.+.-.+..+...+..++..- ...+........+......+++.-.++.
T Consensus 158 ~sf~~Ygl~RK~~------~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~~~~~~~~LLv~aG~vTavpL~lf~ 229 (293)
T COG2962 158 LSFGLYGLLRKKL------KVDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQNANSLWLLLVLAGLVTAVPLLLFA 229 (293)
T ss_pred HHHHHHHHHHHhc------CCchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhcCCchHHHHHHHhhHHHHHHHHHHH
Confidence 7899999887763 4566543333333322323333333343321 0111111111223333445555555542
Q ss_pred HHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 339 QVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 339 ~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
..-++++=.+.++..+++|....++++++|||+++..+.+..+.+-.|+
T Consensus 230 ----~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL 278 (293)
T COG2962 230 ----AAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL 278 (293)
T ss_pred ----HHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 5568888899999999999999999999999999999999988876664
No 32
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.45 E-value=6.3e-11 Score=112.72 Aligned_cols=216 Identities=13% Similarity=0.197 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC-----
Q 016212 169 LAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE----- 243 (393)
Q Consensus 169 ~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~----- 243 (393)
..+...-++++++.|-+.+.++.+++++++++...+..+.|+++..+++++|.++++|.++++.+.|+.++..+.
T Consensus 92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~ 171 (345)
T KOG2234|consen 92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG 171 (345)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 344455567888888899999999999999999999999999999999999999999999999999999986221
Q ss_pred ------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccch-hhhhhhc
Q 016212 244 ------VSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFT-PAYLQSA 316 (393)
Q Consensus 244 ------~~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~-~~~~~~~ 316 (393)
.+..+.|+...+.++.+.++-.++.+|++++.+..+.--+++-| .++.++.+...+..|+.... ...+ .
T Consensus 172 a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~--~~g~~f~~l~~~~~d~~~i~~~gff--~ 247 (345)
T KOG2234|consen 172 AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLY--FFGILFNLLTILLQDGEAINEYGFF--Y 247 (345)
T ss_pred ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH--HHHHHHHHHHHhhccccccccCCcc--c
Confidence 12348899999999999999999999999654322222233333 34444444444344433221 1111 2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 317 GLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 317 ~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
|++ ...|..++..++.+.+.. .+++..+-..-.....+..+++.+.|+.+||.++|....+|+.+++.++++
T Consensus 248 G~s-~~vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~l 319 (345)
T KOG2234|consen 248 GYS-SIVWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFL 319 (345)
T ss_pred ccc-HHHHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHH
Confidence 443 345555666677666553 567777888888888888999999999999999999999999999988763
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.18 E-value=1.8e-11 Score=110.68 Aligned_cols=255 Identities=13% Similarity=0.124 Sum_probs=190.8
Q ss_pred HHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHH
Q 016212 121 IFNIYNKQVLKV-YRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH 199 (393)
Q Consensus 121 ~~~~~nK~~l~~-f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ 199 (393)
...+.+.++-.. .+.|..-+++..+.-+++--++...|. +.-+..+++++.+++.-.-+|++-..|.||++.....
T Consensus 32 ~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~ 108 (336)
T KOG2766|consen 32 STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIM 108 (336)
T ss_pred cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHH
Confidence 344555555554 677877777777655544434433332 2224556778888888888888999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC--------ccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 016212 200 TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE--------VSFNWAGFWSAMASNLTNQSRNVLSKKV 271 (393)
Q Consensus 200 ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~s~l~~a~~~vl~k~~ 271 (393)
.+..-..+.+++++++|++.|+.+.++.+++++++|++++...| .+....|.+++++++-+||..|+..+.+
T Consensus 109 lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEfl 188 (336)
T KOG2766|consen 109 LLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFL 188 (336)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHH
Confidence 99999999999999999999999999999999999999987654 2334789999999999999999999977
Q ss_pred hccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Q 016212 272 MVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPV 351 (393)
Q Consensus 272 ~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~ 351 (393)
- ++.|-.+++....+++.++...- +..|...... -.++ ..+...+. .+++.++..-..-.+++..|++
T Consensus 189 v----kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t-----l~w~-~~i~~yl~-f~L~MFllYsl~pil~k~~~aT 256 (336)
T KOG2766|consen 189 V----KNADRVELMGFLGLFGAIISAIQ-FIFERHHVST-----LHWD-SAIFLYLR-FALTMFLLYSLAPILIKTNSAT 256 (336)
T ss_pred H----hcCcHHHHHHHHHHHHHHHHHHH-Hhhhccceee-----Eeeh-HHHHHHHH-HHHHHHHHHHhhHHheecCCce
Confidence 5 46788899999999998877766 3455433221 1121 11211122 3333333322335778999999
Q ss_pred HHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 352 THSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 352 t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
.+.+.-...+.+++++ ..||-+++|.-.+..+.+..|+-
T Consensus 257 ~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~Gli 295 (336)
T KOG2766|consen 257 MFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLI 295 (336)
T ss_pred EEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhE
Confidence 9999888899999988 88999999999999999988863
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.17 E-value=3.4e-10 Score=104.22 Aligned_cols=189 Identities=14% Similarity=0.104 Sum_probs=130.8
Q ss_pred cchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC--------------------Cc-------c
Q 016212 193 VAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT--------------------EV-------S 245 (393)
Q Consensus 193 ~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~--------------------~~-------~ 245 (393)
++++.....|+..++++++.+..+.+||++..++++.++++.|+.....+ +. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 57788899999999999999999999999999999999999998753221 10 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHH-H---HhcCccchhhhhhhcCCchH
Q 016212 246 FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVT-L---IMEGVTFTPAYLQSAGLNLK 321 (393)
Q Consensus 246 ~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~-~---~~e~~~~~~~~~~~~~~~~~ 321 (393)
..+.|....+.+..+.++..++.++..+++ +.. .|...++..+..+.. . ..++.......-...++. .
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~--~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 153 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG--DTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYP-T 153 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCC--CCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCc-h
Confidence 236788888889999999999999876432 111 333333332222221 1 111111110000001222 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 322 EVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 322 ~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
..+..++..++.+.+ ..++++..++.+.++...++++++.++|+++|||+++..+++|+.+++.|+++
T Consensus 154 ~~~~~~~~~a~~~~~----v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 154 AVWIVGLLNVGGGLC----IGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHHhcCce----eeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 223233333433333 46889999999999999999999999999999999999999999999999874
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.09 E-value=8.4e-10 Score=91.16 Aligned_cols=117 Identities=26% Similarity=0.435 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH-HhhcC-CCCCCHHHHHHHHHHHHH-HHHHHHHhhhhccccchhH
Q 016212 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLW-TFNLY-RPKVSSTQLAAILPLALV-HTLGNLFTNMSLGKVAVSF 197 (393)
Q Consensus 121 ~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~-~~~~~-~~~~~~~~~~~~l~~gl~-~~~~~~~~~~al~~~svs~ 197 (393)
...+.+|...++++ |...+++|+..+.+ +.... ..+.. ..+.+++++...+..+++ ..+++.+.+.++++.+++.
T Consensus 5 ~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 82 (126)
T PF00892_consen 5 IYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASI 82 (126)
T ss_pred eHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhH
Confidence 34578899998877 99999999999986 43332 22221 245567777777777877 5888999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheee
Q 016212 198 THTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (393)
Q Consensus 198 ~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~ 239 (393)
.+++..++|+++++++++++||+++++++.+++++++|++++
T Consensus 83 ~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 83 VSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.04 E-value=4.1e-09 Score=85.94 Aligned_cols=120 Identities=23% Similarity=0.197 Sum_probs=102.1
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcC-C--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhH
Q 016212 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-R--PKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSF 197 (393)
Q Consensus 121 ~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~-~--~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~ 197 (393)
...++.|.-+++.+ |.+-+++|..+..+.+........+ . ...+++.+..+..-|+..+.+.++|+.|++.-.+|.
T Consensus 17 L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~ 95 (140)
T COG2510 17 LTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASR 95 (140)
T ss_pred HHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcce
Confidence 45678999998888 9999999999888777655443332 1 124667777777778888889999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 198 THTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 198 ~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
..-+..+.|+++++++++++|||++..++++++++++|++++..
T Consensus 96 VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 96 VVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred EEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999998764
No 37
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.95 E-value=2.8e-09 Score=87.51 Aligned_cols=104 Identities=16% Similarity=0.226 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHhhcC-C---CCCCHHHHHHHHHHHHHHH-HHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHH
Q 016212 141 TCQFGVGTVLVLLLWTFNLY-R---PKVSSTQLAAILPLALVHT-LGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAM 215 (393)
Q Consensus 141 ~~r~~~~~lll~~~~~~~~~-~---~~~~~~~~~~~l~~gl~~~-~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l 215 (393)
.+|+..+.+++......+++ + +..+++.+..++..|++.. .++.++++|+++.| +.+..+.++.|+++++++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46777777766544333222 1 1122344455566677664 78999999999999 68889999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHhhhheeeecCCcc
Q 016212 216 FLGEFPTLWVVGSLIPIMGGVALASVTEVS 245 (393)
Q Consensus 216 ~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~~ 245 (393)
++|||++++++.+++++++|+++...+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999998877654
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.89 E-value=1.1e-08 Score=89.56 Aligned_cols=211 Identities=18% Similarity=0.181 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc--ccc
Q 016212 170 AAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV--SFN 247 (393)
Q Consensus 170 ~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~--~~~ 247 (393)
++..|.+++..+.++.|..|++.++.+.++.+.++.-.|+.+++++.+|+|+...++++.++.+.|+++....|. ..+
T Consensus 54 ~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e 133 (290)
T KOG4314|consen 54 IRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADE 133 (290)
T ss_pred eeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhh
Confidence 445677788888999999999999999999999999999999999999999999999999999999999987653 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHH----HHHH-HHhcCccchhhhhhhcCCchHH
Q 016212 248 WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILM----IPVT-LIMEGVTFTPAYLQSAGLNLKE 322 (393)
Q Consensus 248 ~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l----~p~~-~~~e~~~~~~~~~~~~~~~~~~ 322 (393)
+.|+.+++.++...++|.++.|+...+. +.. +...+++..++.=+ .|.. +.+.+.+ .+++.....
T Consensus 134 ~iGi~~AV~SA~~aAlYKV~FK~~iGnA--n~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE----~~qsFA~~P-- 203 (290)
T KOG4314|consen 134 IIGIACAVGSAFMAALYKVLFKMFIGNA--NFG--DAAHFMSCLGFFNLCFISFPALILAFTGVE----HLQSFAAAP-- 203 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccC--cch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchH----HHHHHhhCC--
Confidence 9999999999999999999999987432 222 22233333333211 2221 1122211 122111110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 323 VYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 323 l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
|-.+...+.....+|...-..+..+.|...|+...+..+.-.....++-+-..+.....|..+++.|-
T Consensus 204 -WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 204 -WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred -chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 11122233334445544445677888999999888888888888877777678888888888887764
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.85 E-value=5.7e-07 Score=84.10 Aligned_cols=213 Identities=15% Similarity=0.185 Sum_probs=152.4
Q ss_pred CCCCCH--HHHHHHHHHHHHHHHHHHHhhhhccccchhHHH-HHhhhhHHHHHHHHHHHhCCCCCHHHH----HHHHHHh
Q 016212 161 RPKVSS--TQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH-TIKATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIM 233 (393)
Q Consensus 161 ~~~~~~--~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~-ii~s~~Pift~lls~l~l~ek~~~~~~----~sl~l~~ 233 (393)
+|..+. +.+...+..|++.++++...+.|++++.+|.+- +-...+.+.+.+.++++++|..+...+ +++++++
T Consensus 35 ~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~lii 114 (269)
T PF06800_consen 35 QPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLII 114 (269)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHH
Confidence 455553 677777888999999999999999999998874 445788889999999999998765554 5899999
Q ss_pred hhheeeecCCcc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcC
Q 016212 234 GGVALASVTEVS--------FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEG 305 (393)
Q Consensus 234 ~Gv~l~~~~~~~--------~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~ 305 (393)
+|+.+.+..|.+ ....|+...+++.+.|..|.++.|-. +.|+.+...=+++ +.++...+......
T Consensus 115 iGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~------~~~~~~~~lPqai-Gm~i~a~i~~~~~~ 187 (269)
T PF06800_consen 115 IGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF------HVSGWSAFLPQAI-GMLIGAFIFNLFSK 187 (269)
T ss_pred HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc------CCChhHhHHHHHH-HHHHHHHHHhhccc
Confidence 999998876532 12569999999999999999998752 5677655543322 22222222222121
Q ss_pred ccchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchh----hh
Q 016212 306 VTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAI----NA 381 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~----~~ 381 (393)
.. ..+ ...+ .-+.+|+.+-..|.+.+...++.+..+.-...-+..+++.+.|++++||+=+.. .+
T Consensus 188 ~~----~~~------k~~~-~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~ 256 (269)
T PF06800_consen 188 KP----FFE------KKSW-KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL 256 (269)
T ss_pred cc----ccc------cchH-HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence 11 111 0111 124566666667777778888888888888888899999999999999987765 45
Q ss_pred hhHHHhhhcc
Q 016212 382 FGMITLHSNL 391 (393)
Q Consensus 382 iG~~lil~g~ 391 (393)
+|.++++.|-
T Consensus 257 ~G~~Liv~G~ 266 (269)
T PF06800_consen 257 IGLILIVIGA 266 (269)
T ss_pred HHHHHHHHhh
Confidence 6777776653
No 40
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.81 E-value=1.9e-08 Score=83.00 Aligned_cols=122 Identities=17% Similarity=0.215 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHHHHHHHHHH
Q 016212 259 LTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQ 338 (393)
Q Consensus 259 l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~ 338 (393)
++|+.+.++.|+.. ++.|+.....+....+.+ +++.....+..+.. ..+ ........+..++..++.+.
T Consensus 1 ~~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~--- 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKPFK--NLS-PRQWLWLLFLGLLGTALAYL--- 69 (126)
T ss_pred ceeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccccc--CCC-hhhhhhhhHhhccceehHHH---
Confidence 46888999999987 358999999999999887 66666555543210 111 11111111222222233333
Q ss_pred HHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 339 QVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 339 ~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
..+..+++.++...++...+.|+++.+++++++||+++..+++|+++++.|+.
T Consensus 70 -~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~ 122 (126)
T PF00892_consen 70 -LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVV 122 (126)
T ss_pred -HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 44688999999999999999999999999999999999999999999999975
No 41
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.70 E-value=1.9e-07 Score=76.27 Aligned_cols=132 Identities=14% Similarity=0.161 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHH
Q 016212 250 GFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (393)
Q Consensus 250 G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (393)
..++++++++.+++..++.|.-+ +++||..-...-++....++....+....++... ... .. .+..+.+..+.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~-~~~-~k-~~lflilSGla 76 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGG-EIG-PK-SWLFLILSGLA 76 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceeccc-ccC-cc-eehhhhHHHHH
Confidence 46889999999999999999876 4678876666667776666665555444443211 111 11 11122233344
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 330 s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
++.++.+| |+.++.-.+....-..-..+++++++|++++||.+|..+++|+++++.|.-
T Consensus 77 ~glswl~Y----f~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gai 135 (140)
T COG2510 77 GGLSWLLY----FRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAI 135 (140)
T ss_pred HHHHHHHH----HHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCee
Confidence 45555555 777765544444444456789999999999999999999999999999864
No 42
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.61 E-value=2.3e-06 Score=80.28 Aligned_cols=130 Identities=23% Similarity=0.168 Sum_probs=95.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH-HHH
Q 016212 104 RKIEVLLLMGLWYFFNIIFNIYNKQVLKVYR-FPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALV-HTL 181 (393)
Q Consensus 104 ~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~-~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~-~~~ 181 (393)
..+...+..+.|. ..++..|...++.+ .+.....+++.++.+++.+........+..+.+.+...+..+++ ..+
T Consensus 129 G~~~~l~a~~~~a----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 129 GLLLGLGSGISFA----LGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred HHHHHHHHHHHHH----HHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence 3344444445554 34567888877655 23455557788887776655433322223345555556666766 467
Q ss_pred HHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhe
Q 016212 182 GNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVA 237 (393)
Q Consensus 182 ~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~ 237 (393)
+..++++++++.+++.++++..++|++++++++++++|+++..++.+.++++.|+.
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 89999999999999999999999999999999999999999999999999999873
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.58 E-value=1.9e-06 Score=82.77 Aligned_cols=138 Identities=12% Similarity=0.132 Sum_probs=102.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHH
Q 016212 245 SFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVY 324 (393)
Q Consensus 245 ~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~ 324 (393)
+....|.++.++++++|+...++.|.. +++++.++..+...++.+++++......+.+......+ + ....
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~--~--~~~~- 73 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQ--T--PQKI- 73 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHc--C--HHHH-
Confidence 345689999999999999999999763 35899999999999998877776543322110000011 1 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 325 VRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 325 ~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
...+..++....++...++.++.+++...++..+..|+++.++++++++|+++..+++|+++.+.|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~ 141 (296)
T PRK15430 74 FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVL 141 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 11223333444455566899999999999999999999999999999999999999999999999974
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.53 E-value=2.9e-06 Score=79.72 Aligned_cols=137 Identities=12% Similarity=0.132 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHH
Q 016212 249 AGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL 328 (393)
Q Consensus 249 ~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~ 328 (393)
.|.++.++++++|+...+..|. . .++++.++.++-..++.+++.+...............+.... ........
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~----~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 74 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-L----KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQK--RPLILSLL 74 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-h----ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCccc--chHHHHHH
Confidence 3889999999999999999997 3 258999999999999888776655443221100001111111 11122233
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 329 IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 329 ~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
..++....++...+..++.+++.+.++..+..|+++.++++++++|+++..+++|+++.+.|+.
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~ 138 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVI 138 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 4444444455556788999999999999999999999999999999999999999999999863
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.37 E-value=7.8e-06 Score=77.95 Aligned_cols=129 Identities=11% Similarity=0.053 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHHH
Q 016212 251 FWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA 330 (393)
Q Consensus 251 ~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~s 330 (393)
+++.++++++++.+++..||..++ .++ .+.+....+.+.+.|......... .+...+. ..+...+..
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~----~~~--~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~---~~~~~~~~~ 69 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK----EPD--FLWWALLAHSVLLTPYGLWYLAQV----GWSRLPA---TFWLLLAIS 69 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc----hhH--HHHHHHHHHHHHHHHHHHHhcccC----CCCCcch---hhHHHHHHH
Confidence 578899999999999999986532 122 345555666677777664321110 0111111 112223344
Q ss_pred HHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 331 AICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 331 ~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
++....+....+...+..++...+...+..|+++.+++++++||+++..+++|+++++.|+.
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ 131 (281)
T TIGR03340 70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLL 131 (281)
T ss_pred HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 55555555566788899999999999999999999999999999999999999999999874
No 46
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.31 E-value=2.2e-05 Score=75.35 Aligned_cols=117 Identities=16% Similarity=0.148 Sum_probs=84.9
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHhhhhccccchhHHHH
Q 016212 122 FNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVH-TLGNLFTNMSLGKVAVSFTHT 200 (393)
Q Consensus 122 ~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~al~~~svs~~~i 200 (393)
..+..|...++.+ |...+ .+..++.+++.+...........+...+...+.++++. .+.+.++++++++++++.+++
T Consensus 163 ~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~ 240 (293)
T PRK10532 163 YILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT 240 (293)
T ss_pred HHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence 4456677665555 65554 44455554444333222111223444444455677764 567889999999999999999
Q ss_pred HhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeee
Q 016212 201 IKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (393)
Q Consensus 201 i~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~ 240 (393)
+..++|++.+++++++++|+++..++++.+++++|++...
T Consensus 241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998764
No 47
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.28 E-value=1.4e-05 Score=65.25 Aligned_cols=64 Identities=14% Similarity=0.118 Sum_probs=59.2
Q ss_pred HHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 178 VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 178 ~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
.++...++...+++++|++.+..+-++.++++++++++++|||++++++++++++++|+++...
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4566789999999999999999999999999999999999999999999999999999987653
No 48
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.21 E-value=3.4e-05 Score=76.09 Aligned_cols=134 Identities=13% Similarity=0.195 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHH
Q 016212 249 AGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL 328 (393)
Q Consensus 249 ~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~ 328 (393)
.-+...++.-++|+...++.|..++ ..+++..+.+|=..++.++++|+....+.....+. .... .+..+.
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~---~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~------~~~~-~~~~l~ 82 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATS---KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPP------LSVS-ILSKIG 82 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH---CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCc------chHH-HHHHHH
Confidence 3456677888999999999999884 57899999999999999888888765543211010 0011 112223
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHh------cCcccchhhhhhHHHhhhccC
Q 016212 329 IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMF------FRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 329 ~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~------fge~~s~~~~iG~~lil~g~~ 392 (393)
..|+.+..++...+..++.+++...++..+..|+++.++++++ ++|+++..+++|+++.++|+.
T Consensus 83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ 152 (358)
T PLN00411 83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGAL 152 (358)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHH
Confidence 3444334455566888999999999999999999999999999 699999999999999998863
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.20 E-value=3.2e-05 Score=74.24 Aligned_cols=78 Identities=17% Similarity=0.143 Sum_probs=68.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 164 VSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 164 ~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
.+.+.+...+..++...+.++++++++++.+++.++.+..++|++.+++++++++|+++..++++.++++.|+.+...
T Consensus 210 ~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 210 FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 445556556666666667899999999999999999999999999999999999999999999999999999987654
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.17 E-value=4.5e-05 Score=73.11 Aligned_cols=118 Identities=14% Similarity=0.073 Sum_probs=88.8
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcC-C-CCCCHHHHHHHHHHHHH-HHHHHHHhhhhccccchhHHH
Q 016212 123 NIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLY-R-PKVSSTQLAAILPLALV-HTLGNLFTNMSLGKVAVSFTH 199 (393)
Q Consensus 123 ~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~-~-~~~~~~~~~~~l~~gl~-~~~~~~~~~~al~~~svs~~~ 199 (393)
.+.+|..-. +++...+.+++.++..++.+....... . ...+.+.+..++..+++ ..+++.++++++++++++...
T Consensus 166 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s 243 (292)
T PRK11272 166 SVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT 243 (292)
T ss_pred HHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 345565432 235566778888887766544322211 1 11245566666677776 456789999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC
Q 016212 200 TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (393)
Q Consensus 200 ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~ 242 (393)
++..++|++.+++++++++|+++..++++.++++.|+.+....
T Consensus 244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876543
No 51
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.03 E-value=0.0027 Score=61.93 Aligned_cols=226 Identities=9% Similarity=0.031 Sum_probs=137.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHH-HHhhhhHHHHHHHHHHHhCCCC-------CHHHHHHHHHHhhh
Q 016212 164 VSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH-TIKATEPFFSVLLSAMFLGEFP-------TLWVVGSLIPIMGG 235 (393)
Q Consensus 164 ~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~-ii~s~~Pift~lls~l~l~ek~-------~~~~~~sl~l~~~G 235 (393)
.+.+.+...+..|++.+.+++.+..+++++.+|... +-..++-++..++..++++|-. ......+++++++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 345666777788899999999999999999999985 4578899999999999998643 23457899999999
Q ss_pred heeeec----CCc---------cccHHHHHHHHHHHHHHHHHHHHHHHhhccc----cCCCChhhHHHHH---HHHHHHH
Q 016212 236 VALASV----TEV---------SFNWAGFWSAMASNLTNQSRNVLSKKVMVNK----EEALDNITLFSII---TVMSFIL 295 (393)
Q Consensus 236 v~l~~~----~~~---------~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~----~~~~~~~~l~~~~---~~~s~l~ 295 (393)
+++... .|. .....|++.++++.+.+++++.....-+.-. +.+.|+.....-+ ...+.++
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~ 227 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAI 227 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Confidence 999876 332 1236899999999999999994433321100 1244543222211 1233332
Q ss_pred HHHHHHHh---cCccch-hhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhcccchh----HHhHHHHHHHHHHHH
Q 016212 296 MIPVTLIM---EGVTFT-PAYLQSAGL-NLKEVYVRSLIAAICYHAYQQVSYMILQRVSPV----THSVGNCVKRVVVIV 366 (393)
Q Consensus 296 l~p~~~~~---e~~~~~-~~~~~~~~~-~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~----t~sv~~~lk~v~~il 366 (393)
.-..+... ...... ..+...... .... ++...+.|+.+...+...++..++.+.. .+.+..-...+++.+
T Consensus 228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n-~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl 306 (345)
T PRK13499 228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITN-VLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL 306 (345)
T ss_pred HHHHHHHHHHhhCCCcccchhccccchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence 22221111 111100 000110000 0112 2233456666666555555555555332 233444666788888
Q ss_pred HHHHhcCcccc------hhhhhhHHHhhhcc
Q 016212 367 SSVMFFRTPVS------AINAFGMITLHSNL 391 (393)
Q Consensus 367 ~s~i~fge~~s------~~~~iG~~lil~g~ 391 (393)
-|+ ++||.=+ ...++|.++++.|.
T Consensus 307 wGi-~lkE~K~a~~k~~~~l~~G~vliI~g~ 336 (345)
T PRK13499 307 WGL-VLKEWKGASRRPVRVLSLGCVVIILAA 336 (345)
T ss_pred hhh-hhhhccCCCccchhHHHHHHHHHHHHH
Confidence 888 4999766 56688888887764
No 52
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.00 E-value=7.4e-05 Score=71.87 Aligned_cols=63 Identities=25% Similarity=0.329 Sum_probs=58.9
Q ss_pred HHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeee
Q 016212 178 VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (393)
Q Consensus 178 ~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~ 240 (393)
.+.++..+...|+.+.|.+..+-+.+..-++.++++..++|||++++.+.|.++++.|+.++.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 456788999999999999999999999999999999999999999999999999999998765
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.93 E-value=0.00033 Score=67.34 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCch--HHHHHHHHHHHHHHHHHH-HHhhcC------CCCCCHHHHHHHHHHH
Q 016212 106 IEVLLLMGLWYFFNIIFNIYNKQVLKVYRFP--VTVTTCQFGVGTVLVLLL-WTFNLY------RPKVSSTQLAAILPLA 176 (393)
Q Consensus 106 l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P--~~lt~~r~~~~~lll~~~-~~~~~~------~~~~~~~~~~~~l~~g 176 (393)
+...+..+.|.. ..++.|...++.+.+ ......+.+.+.+..... ...... ....+.+.+..++.++
T Consensus 146 ~l~l~aal~~a~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 146 MLTLAAAFSWAC----GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHH----HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 334444445543 345666665544433 334445555544332221 111111 0123456667777777
Q ss_pred HHH-HHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 177 LVH-TLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 177 l~~-~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
++. .+++.+++.++++.++..+..+..++|++..+++++++||+++..++++.+++++|+.+...
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 664 56789999999999999999999999999999999999999999999999999999987654
No 54
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.89 E-value=0.00079 Score=57.69 Aligned_cols=124 Identities=19% Similarity=0.186 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHhc------CCchHHHHHHHHHHHHHHHHHHHHhhcC-C-------C---CC--CHHHHHHHHHHHH
Q 016212 117 FFNIIFNIYNKQVLKV------YRFPVTVTTCQFGVGTVLVLLLWTFNLY-R-------P---KV--SSTQLAAILPLAL 177 (393)
Q Consensus 117 ~~s~~~~~~nK~~l~~------f~~P~~lt~~r~~~~~lll~~~~~~~~~-~-------~---~~--~~~~~~~~l~~gl 177 (393)
+......++.|..+++ -..|+.+.......+.+++.+.+..... + . +. +.+....++..|+
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL 89 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence 3444556677777776 2246777777666666666554433211 1 0 00 2234455566677
Q ss_pred HHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeee
Q 016212 178 VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (393)
Q Consensus 178 ~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~ 240 (393)
+..+.++..+..++++++-+.+++....-+.+.++++++++|+++..++.|+++.++|+.+..
T Consensus 90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 777889999999999999999999999999999999999999999999999999999998764
No 55
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.85 E-value=0.00028 Score=59.20 Aligned_cols=116 Identities=15% Similarity=0.118 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHH
Q 016212 249 AGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSL 328 (393)
Q Consensus 249 ~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~ 328 (393)
.|+++.+.+.++.+..+++.|+-+++.+ +.+... . . ...+. . ..+ ....++..++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~---~-~-~~~~~----~-~~~--------------p~~~i~lgl~ 56 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAW---D-F-IAALL----A-FGL--------------ALRAVLLGLA 56 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-Cccchh---H-H-HHHHH----H-Hhc--------------cHHHHHHHHH
Confidence 4789999999999999999998774321 121111 0 0 00000 0 000 0113455666
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHH--hcCcccchhhhhhHHHhhhccCC
Q 016212 329 IAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVM--FFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 329 ~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i--~fge~~s~~~~iG~~lil~g~~~ 393 (393)
..++++.+|+ ..+++.+...+.-.-....+.+.+.++. +|||++|+.+++|++++++|+++
T Consensus 57 ~~~la~~~w~----~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~l 119 (129)
T PRK02971 57 GYALSMLCWL----KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWL 119 (129)
T ss_pred HHHHHHHHHH----HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 7777777774 6678887777766666666677777774 89999999999999999999863
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.83 E-value=0.00014 Score=70.05 Aligned_cols=120 Identities=17% Similarity=0.087 Sum_probs=84.2
Q ss_pred HHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCC-----------CHHHHHH-HHHHHH-HHHHHHHH
Q 016212 121 IFNIYNKQVLK--VYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKV-----------SSTQLAA-ILPLAL-VHTLGNLF 185 (393)
Q Consensus 121 ~~~~~nK~~l~--~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~-----------~~~~~~~-~l~~gl-~~~~~~~~ 185 (393)
...++.|...+ +.+ |..++..++..+.+.+.+........+.. ....... .+..++ .+...+.+
T Consensus 159 ~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T TIGR00817 159 SRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV 237 (302)
T ss_pred HHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHH
Confidence 44567777776 444 78889999988887766553321100000 0001111 112222 23333466
Q ss_pred hhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 186 TNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 186 ~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
++.+++++++..+++....+|+++++++++++||+++..+++|.+++++|+.+...
T Consensus 238 ~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 238 AFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999987654
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.70 E-value=0.001 Score=65.46 Aligned_cols=136 Identities=13% Similarity=0.101 Sum_probs=94.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC-hhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHH
Q 016212 247 NWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALD-NITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYV 325 (393)
Q Consensus 247 ~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~-~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~ 325 (393)
++.-..+++.-=.+....+++.|..++ ..+ |+.+..+...++.+++...+.. .... .+. .. .....+.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~-~~~-~~----~~~~~~~ 115 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLYWAT-GFRK-IPR-IK----SLKLFLK 115 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHHHh-CCCC-CCC-CC----CHHHHHH
Confidence 344445555555555667888898883 467 9999999999887766554422 1110 000 00 0111223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 326 RSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 326 ~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
.++..|+++...+...+..++.+++..+++.-...|++++++++++++|+++..+++|++++++|+.+
T Consensus 116 ~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l 183 (350)
T PTZ00343 116 NFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVAL 183 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHh
Confidence 34455555544444556788999999999999999999999999999999999999999999999863
No 58
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.59 E-value=0.0013 Score=61.75 Aligned_cols=134 Identities=13% Similarity=0.145 Sum_probs=98.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHH
Q 016212 247 NWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVR 326 (393)
Q Consensus 247 ~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~ 326 (393)
...|+++++.+-+.|+.--.+.|-. +++++.++..+-.+.+.++++........+.......+ +...+. .
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-----~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~----~p~~~~-~ 74 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-----EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLK----QPKTLL-M 74 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-----ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh----CcHHHH-H
Confidence 3579999999999999999999865 47889999999999998887776655544321111111 111222 2
Q ss_pred HHHHHHHHHHHHHHH-HHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 327 SLIAAICYHAYQQVS-YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 327 ~~~s~v~~~l~~~~~-~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
...+++ -...|... .+....-..+..|..-+++|.+.+++|.++++|+++..|++..+++..|+
T Consensus 75 ~~l~a~-li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV 139 (293)
T COG2962 75 LALTAL-LIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGV 139 (293)
T ss_pred HHHHHH-HHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 222222 11223322 36677788899999999999999999999999999999999999999886
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.58 E-value=0.00073 Score=64.79 Aligned_cols=112 Identities=21% Similarity=0.183 Sum_probs=82.5
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHH----HHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhcc-ccchh
Q 016212 122 FNIYNKQVLKVYRFPVTVTTCQFG----VGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLG-KVAVS 196 (393)
Q Consensus 122 ~~~~nK~~l~~f~~P~~lt~~r~~----~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~-~~svs 196 (393)
....+|.. +.+ |+..++.|.. .+.++...+ . +.+|. ..+.....+..|++....+.++..+.+ +++++
T Consensus 167 ~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~-~--~~~~~-~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~ 239 (290)
T TIGR00776 167 YVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH-I--LAKPL-KKYAILLNILPGLMWGIGNFFYLFSAQPKVGVA 239 (290)
T ss_pred HHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH-h--cccch-HHHHHHHHHHHHHHHHHHHHHHHHHcccccchh
Confidence 34566754 244 7666555555 333333332 1 11222 233334445588888888999999999 99999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhCCCCCHHHH----HHHHHHhhhheeee
Q 016212 197 FTHTIKATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIMGGVALAS 240 (393)
Q Consensus 197 ~~~ii~s~~Pift~lls~l~l~ek~~~~~~----~sl~l~~~Gv~l~~ 240 (393)
.+.++...+|+...+.+++++||+.+++++ ++.+++++|+.+..
T Consensus 240 ~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 240 TSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 99999999998764
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.52 E-value=0.004 Score=58.65 Aligned_cols=119 Identities=25% Similarity=0.311 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhcCCchHHHHH-HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH-HHHHHhhhhccccchhHH
Q 016212 121 IFNIYNKQVLKVYRFPVTVTT-CQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHT-LGNLFTNMSLGKVAVSFT 198 (393)
Q Consensus 121 ~~~~~nK~~l~~f~~P~~lt~-~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~-~~~~~~~~al~~~svs~~ 198 (393)
...+.+|... +.+ +..... .++. ....+.............+.+.+......+++.. .++.+.+.+++..+++..
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 244 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLL-LALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV 244 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHH-HHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 3456677665 333 444444 5554 2222222222211112334566777777788766 589999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC
Q 016212 199 HTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (393)
Q Consensus 199 ~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~ 242 (393)
+.+..++|++..++++++++|+++..++.+.++++.|+.+....
T Consensus 245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999876543
No 61
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.47 E-value=0.00053 Score=57.49 Aligned_cols=71 Identities=20% Similarity=0.092 Sum_probs=61.5
Q ss_pred HHHHH-HHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHH--HhCCCCCHHHHHHHHHHhhhheeeecCC
Q 016212 173 LPLAL-VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAM--FLGEFPTLWVVGSLIPIMGGVALASVTE 243 (393)
Q Consensus 173 l~~gl-~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l--~l~ek~~~~~~~sl~l~~~Gv~l~~~~~ 243 (393)
+..|+ .+++..++.++++++.|++.+.-+-+..+.++.+.++. ++||++++.++++++++++|+.++..++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 34444 46778899999999999999999999999889888885 8999999999999999999999887543
No 62
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.44 E-value=0.0026 Score=58.41 Aligned_cols=116 Identities=17% Similarity=0.195 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHhhhhccccchhHHH
Q 016212 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVH-TLGNLFTNMSLGKVAVSFTH 199 (393)
Q Consensus 121 ~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~al~~~svs~~~ 199 (393)
.+.+..|.+-...+ --.-...-+.+++++.+++-....-..-++......-+.++++. ++-+.+.+.+++.+|...+.
T Consensus 162 ~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~ 240 (292)
T COG5006 162 LYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG 240 (292)
T ss_pred HHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence 44445555543222 22334455666666665543322112223445555555566664 45689999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhe
Q 016212 200 TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVA 237 (393)
Q Consensus 200 ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~ 237 (393)
++.+++|.+-++.++++++|.++..+|+++..++.+++
T Consensus 241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999888776
No 63
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.32 E-value=0.00082 Score=55.47 Aligned_cols=70 Identities=17% Similarity=0.374 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC
Q 016212 173 LPLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (393)
Q Consensus 173 l~~gl~~~~~~~~~~~al~~~svs~~~ii-~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~ 242 (393)
+...+++++..++...+++++|++.+..+ ....-+.+++.++++++|++++.+++++.++++|+......
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 44455677788889999999999999777 57999999999999999999999999999999999877543
No 64
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.32 E-value=0.0033 Score=51.27 Aligned_cols=50 Identities=10% Similarity=0.156 Sum_probs=44.1
Q ss_pred HHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 342 ~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
+..++..++ ..+....+.|+++.++|+++|+|+++..+++|+++++.|+-
T Consensus 53 ~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~ 102 (113)
T PF13536_consen 53 FYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVI 102 (113)
T ss_pred HHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 566777775 66688889999999999999999999999999999999873
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.17 E-value=0.0021 Score=52.46 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=44.6
Q ss_pred HHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 342 ~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
-..+++.+...+...-.+..+++.+.|+++|||++|..+++|++++++|+.
T Consensus 55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~ 105 (111)
T PRK15051 55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIV 105 (111)
T ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 466778877776666669999999999999999999999999999999974
No 66
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.10 E-value=0.0021 Score=52.34 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 175 LALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 175 ~gl~~~~~~~~~~~al~~~svs~~~ii-~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
.-+.+.+...+...+++++|++.+..+ ....-+.+++.+++++||++++.+++++.++++|+++...
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 344566677778889999999999877 5688899999999999999999999999999999998754
No 67
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.04 E-value=0.0033 Score=50.68 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeee
Q 016212 174 PLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (393)
Q Consensus 174 ~~gl~~~~~~~~~~~al~~~svs~~~ii-~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~ 240 (393)
..-+.+....++-..+++++|++.+..+ ...--+.+++.+++++||++++.+++++.++++|++...
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3345567778888899999999998665 668889999999999999999999999999999998764
No 68
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.03 E-value=0.004 Score=59.17 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=62.4
Q ss_pred HHH-HHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC
Q 016212 175 LAL-VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (393)
Q Consensus 175 ~gl-~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~ 242 (393)
.|+ .+.++...++.|+.+.|.+..+-+.++.-+..++++..+++||++..-.++.+++++|..+.+..
T Consensus 69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 354 46788999999999999999999999999999999999999999999999999999999987754
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.02 E-value=0.0023 Score=51.26 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 174 PLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 174 ~~gl~~~~~~~~~~~al~~~svs~~~ii-~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
..-+.+.....+-..|++++|++.+..+ ...--+.+++.+++++||+.+..+++++.++++|++....
T Consensus 35 l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 35 LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 3344556677888889999999998555 7788899999999999999999999999999999986643
No 70
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.02 E-value=0.0031 Score=51.19 Aligned_cols=67 Identities=6% Similarity=-0.023 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheee
Q 016212 173 LPLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (393)
Q Consensus 173 l~~gl~~~~~~~~~~~al~~~svs~~~ii-~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~ 239 (393)
+..-+.+.....+-..+++++|++.+..+ ...--+.+++.+++++||++++.++.++.++++|++..
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 33345566677888889999999998655 66888999999999999999999999999999999864
No 71
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.0003 Score=64.16 Aligned_cols=212 Identities=15% Similarity=0.140 Sum_probs=142.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHH-HHhhhhHHHHHHHHHHHhCCCCCHHHH----HHHHHHhhh
Q 016212 161 RPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH-TIKATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIMGG 235 (393)
Q Consensus 161 ~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~-ii~s~~Pift~lls~l~l~ek~~~~~~----~sl~l~~~G 235 (393)
+|..+.+.+..-+.-|++...+....+.|.+++.+|-+- +-..++.+-+.+++.+.++|..+..+. .+++++++|
T Consensus 51 ~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG 130 (288)
T COG4975 51 SPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIG 130 (288)
T ss_pred cCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHh
Confidence 566777777777778888999999999999999988874 346677888899999999998776653 688999999
Q ss_pred heeeecCCcc--------ccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCcc
Q 016212 236 VALASVTEVS--------FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVT 307 (393)
Q Consensus 236 v~l~~~~~~~--------~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~ 307 (393)
+.+.+..|.+ .--.|+...+.+.+.|..|-++.+.+.. +..|.+--++.-+..+.+ ..-....
T Consensus 131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v---~g~saiLPqAiGMv~~al----i~~~~~~-- 201 (288)
T COG4975 131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDV---DGLSAILPQAIGMVIGAL----ILGFFKM-- 201 (288)
T ss_pred heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccccc---cchhhhhHHHHHHHHHHH----HHhhccc--
Confidence 9999876531 1246888888999999999998886421 233333333332222222 1111111
Q ss_pred chhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhh----hh
Q 016212 308 FTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINA----FG 383 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~----iG 383 (393)
.... ....+.. +..|+.+-..|+..+...++++-.|.=...-+--+++++-|+++++|+=|..++ +|
T Consensus 202 -~~~~-------~K~t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iG 272 (288)
T COG4975 202 -EKRF-------NKYTWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIG 272 (288)
T ss_pred -ccch-------HHHHHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhh
Confidence 0100 0112222 345566666676666666776655444445566788899999999999888765 56
Q ss_pred HHHhhhc
Q 016212 384 MITLHSN 390 (393)
Q Consensus 384 ~~lil~g 390 (393)
+++++.|
T Consensus 273 iilivvg 279 (288)
T COG4975 273 IILIVVG 279 (288)
T ss_pred HHHHHHH
Confidence 6665554
No 72
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.88 E-value=0.022 Score=53.64 Aligned_cols=69 Identities=28% Similarity=0.207 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHH----HHHHHHhhhhee
Q 016212 170 AAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVV----GSLIPIMGGVAL 238 (393)
Q Consensus 170 ~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~----~sl~l~~~Gv~l 238 (393)
..-+..|++++.+++++..|.+.+.++..-.+..+..+...+.+.+++||+-+++++ ++++++++|.++
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 444677999999999999999999999999999999999999999999999887754 566666666543
No 73
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.54 E-value=0.072 Score=51.96 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=86.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH-hhc-C--CCCCCHHHHHHHHHH
Q 016212 100 TELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWT-FNL-Y--RPKVSSTQLAAILPL 175 (393)
Q Consensus 100 ~~~~~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~-~~~-~--~~~~~~~~~~~~l~~ 175 (393)
++..+-+..+....+|.+.+ ++.|+...+.+....+... -..+.++..+... +.. . .-..+.+....++..
T Consensus 165 ~~i~GDll~l~~a~lya~~n----V~~E~~v~~~~~~~~lg~~-Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~ 239 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSN----VLEEKLVKKAPRVEFLGML-GLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY 239 (334)
T ss_pred ccchhHHHHHHHHHHHHHHH----HHHHHhcccCCHHHHHHHH-HHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH
Confidence 34455555555566665444 5667777766633332222 2233333322211 111 1 112234433333333
Q ss_pred HHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCC
Q 016212 176 ALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTE 243 (393)
Q Consensus 176 gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~ 243 (393)
++.....+.+....++..++.+..+-..++.++.++++.+++|+++++.-++|.+++++|.++....+
T Consensus 240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 44333444455667888888888888889999999999999999999999999999999999987654
No 74
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.49 E-value=0.061 Score=51.99 Aligned_cols=141 Identities=16% Similarity=0.216 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCc--cchhhhhhhcCC-chHHHHHHH
Q 016212 251 FWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGV--TFTPAYLQSAGL-NLKEVYVRS 327 (393)
Q Consensus 251 ~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~--~~~~~~~~~~~~-~~~~l~~~~ 327 (393)
++..+...+-++......|...++++.+..+.+....+-+.-.+++....+.-+.. +-....++..-+ ...... -+
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l-k~ 95 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETL-KV 95 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHH-HH
Confidence 34445555566666666665544334456677777777777777766655433321 100001110000 111222 23
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 328 LIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 328 ~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
..-++.|.+.|...|..+...+|.|+.+...+|...+.++++++++++++..||...++...|+-
T Consensus 96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~ 160 (345)
T KOG2234|consen 96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVA 160 (345)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 34456688888788899999999999999999999999999999999999999999999988863
No 75
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.49 E-value=0.038 Score=44.81 Aligned_cols=60 Identities=8% Similarity=0.176 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHhcccc-hhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 328 LIAAICYHAYQQVSYMILQRVS-PVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 328 ~~s~v~~~l~~~~~~~~l~~~s-~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
+.-++++++.. ..+++.+ .+.|++..-+-.+.+.+.|+++|||++|+.+++|+++++.|+
T Consensus 43 ~~~~~sf~~Ls----~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GV 103 (109)
T PRK10650 43 AAVLAAFSALS----QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGM 103 (109)
T ss_pred HHHHHHHHHHH----HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 33445555443 3445544 347888888899999999999999999999999999999987
No 76
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.46 E-value=0.055 Score=52.09 Aligned_cols=130 Identities=19% Similarity=0.294 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHh--h-cCCCC-----CCHHHHHHHHHHHHHHHHH
Q 016212 112 MGLWYFFNIIFNIYNKQVLKVYR-FPVTVTTCQFGVGTVLVLLLWTF--N-LYRPK-----VSSTQLAAILPLALVHTLG 182 (393)
Q Consensus 112 ~~~w~~~s~~~~~~nK~~l~~f~-~P~~lt~~r~~~~~lll~~~~~~--~-~~~~~-----~~~~~~~~~l~~gl~~~~~ 182 (393)
+.+..+.......+.|..+++.+ .++...+.....+.++....... . ..+.. ..++....++..++....+
T Consensus 159 l~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g 238 (303)
T PF08449_consen 159 LLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALG 238 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33444445556678888887654 35677777666666655433322 1 11111 1123445566667777777
Q ss_pred HHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 183 NLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 183 ~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
..+.+.-.+..++-..+++..+--+++.+++.+++++++++.+|.|+++++.|..+...
T Consensus 239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 77777778889999999999999999999999999999999999999999999987654
No 77
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.35 E-value=0.028 Score=44.23 Aligned_cols=56 Identities=20% Similarity=0.163 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 016212 177 LVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPI 232 (393)
Q Consensus 177 l~~~~~~~~~~~al~~~svs~~~ii-~s~~Pift~lls~l~l~ek~~~~~~~sl~l~ 232 (393)
..+....++...+++++|++.+..+ .....+.+++.+.+++||+.+..+++++.++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3567788999999999999999655 6799999999999999999999999998864
No 78
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.30 E-value=0.032 Score=46.04 Aligned_cols=62 Identities=15% Similarity=0.304 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcccch-hHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 327 SLIAAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 327 ~~~s~v~~~l~~~~~~~~l~~~s~-~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
+..-+++++++. ..+++..- +.|++..-+-.+.+.+.|+++|||++|+.+++|+++++.|+-
T Consensus 37 i~~~~~sf~~ls----~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi 99 (120)
T PRK10452 37 LVMISLSYIFLS----FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIV 99 (120)
T ss_pred HHHHHHHHHHHH----HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 344455555543 44555443 456776677889999999999999999999999999999963
No 79
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.24 E-value=0.17 Score=42.98 Aligned_cols=117 Identities=19% Similarity=0.184 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--HHHHHHHHHHHHHHHHHHHHhhhhccccchhHH
Q 016212 121 IFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVS--STQLAAILPLALVHTLGNLFTNMSLGKVAVSFT 198 (393)
Q Consensus 121 ~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~--~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~ 198 (393)
....+|-.+-+....|+.-+++-+..+.+.+..++.....+ +.+ ++..++...-|++......+..+....+.++.+
T Consensus 15 ~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~ 93 (138)
T PF04657_consen 15 LQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP-SLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAALT 93 (138)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHHH
Confidence 34456666666666799999999999998877665544321 111 122234445778888888999999999999888
Q ss_pred HHH-hhhhHHHHHHHHHH----HhCCCCCHHHHHHHHHHhhhhee
Q 016212 199 HTI-KATEPFFSVLLSAM----FLGEFPTLWVVGSLIPIMGGVAL 238 (393)
Q Consensus 199 ~ii-~s~~Pift~lls~l----~l~ek~~~~~~~sl~l~~~Gv~l 238 (393)
..+ ..-+-+..++++.+ .-++++++.++++++++++|+.+
T Consensus 94 ~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 94 TILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 665 45566666777775 34578999999999999999864
No 80
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.19 E-value=0.045 Score=44.52 Aligned_cols=61 Identities=13% Similarity=0.190 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHhcccch-hHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 328 LIAAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 328 ~~s~v~~~l~~~~~~~~l~~~s~-~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
+.-+.+++++. ..+++.+- +.|++..-+-.+.+.+.|+++|||++|+.+++|+++++.|+-
T Consensus 38 ~~~~~sf~~l~----~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi 99 (110)
T PRK09541 38 ICYCASFWLLA----QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVL 99 (110)
T ss_pred HHHHHHHHHHH----HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 33444444442 44555443 467777778889999999999999999999999999999963
No 81
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.09 E-value=0.018 Score=53.78 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 327 SLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 327 ~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
...-++.|...|...|..++.++|.++.+....|.+++.++++++++++++..||+++.+.+.|+-
T Consensus 20 ~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 20 LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVV 85 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHh
Confidence 345677788899999999999999999999999999999999999999999999999999998864
No 82
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.01 E-value=0.2 Score=42.47 Aligned_cols=130 Identities=14% Similarity=0.186 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCC-ChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHHHH
Q 016212 251 FWSAMASNLTNQSRNVLSKKVMVNKEEAL-DNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLI 329 (393)
Q Consensus 251 ~~~~l~s~l~~a~~~vl~k~~~~~~~~~~-~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~ 329 (393)
.++++.+.++-+++..+..++-+ +. |++.-.......+++.+....++.++.+.. ...... ...|+
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~----~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~--~~~~~p---~w~~l---- 69 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGK----ALGSPLVASFISFGVGFILLLIILLITGRPSLA--SLSSVP---WWAYL---- 69 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HhCccHHHHHHHHHHHHHHHHHHHHHhcccccc--hhccCC---hHHhc----
Confidence 56778888888888888777642 33 488888888888888887777766654221 111111 11222
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHH-HHHHHHH-hcC---cccchhhhhhHHHhhhccCC
Q 016212 330 AAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVV-VIVSSVM-FFR---TPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 330 s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~-~il~s~i-~fg---e~~s~~~~iG~~lil~g~~~ 393 (393)
.|+.+..+.......+.+.++....+....-.++ ++++..+ +|| +++++.+++|+++++.|+.|
T Consensus 70 GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 70 GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4444444444556778999998777755554444 4555554 343 67999999999999999865
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.94 E-value=0.081 Score=42.62 Aligned_cols=59 Identities=5% Similarity=0.125 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHhcccc-hhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 329 IAAICYHAYQQVSYMILQRVS-PVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 329 ~s~v~~~l~~~~~~~~l~~~s-~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
.-++++++.. ..+++.+ .+.|++..-+-.+.+.+.|+++|||++|+.+++|+.+++.|+
T Consensus 38 ~~~~sf~~Ls----~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GV 97 (105)
T PRK11431 38 AMIVSMALLA----WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGI 97 (105)
T ss_pred HHHHHHHHHH----HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3344544443 3344444 457888888999999999999999999999999999999986
No 84
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.85 E-value=0.14 Score=46.77 Aligned_cols=67 Identities=13% Similarity=0.033 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhee
Q 016212 172 ILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVAL 238 (393)
Q Consensus 172 ~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l 238 (393)
.....+..+.+..+..+.+++.+.....+...+.++++.+++.++++|+++...+.+..+++.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3444566777888899999999999999999999999999999999999999999999999999865
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.77 E-value=0.086 Score=42.30 Aligned_cols=60 Identities=13% Similarity=0.249 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccc-hhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 328 LIAAICYHAYQQVSYMILQRVS-PVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 328 ~~s~v~~~l~~~~~~~~l~~~s-~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
+.-++++.+.. ..++++. .+.|++..-+-.+.+.+.|+++|||++|..+++|+.++++|+
T Consensus 38 v~~~~sf~~Ls----~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGv 98 (106)
T COG2076 38 VGYGLSFYLLS----LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGV 98 (106)
T ss_pred HHHHHHHHHHH----HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHH
Confidence 34445554442 3345443 357888899999999999999999999999999999999986
No 86
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.45 E-value=0.053 Score=44.16 Aligned_cols=69 Identities=22% Similarity=0.292 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccchhHHHHH-hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheee
Q 016212 170 AAILPLALVHTLGNLFTNMSLGKVAVSFTHTI-KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (393)
Q Consensus 170 ~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii-~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~ 239 (393)
+..+|.. ++-.+.+.+++.++..+.|.+.-+ .+++=+||++.++++.+|..+++.++++.+++.|+.+.
T Consensus 43 ~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 3344443 344566778889999999999777 59999999999988888888999999999999999875
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.20 E-value=0.17 Score=49.59 Aligned_cols=132 Identities=8% Similarity=0.009 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHH--HHHHHHHH-HhcCccchhhhhhhcC-CchHHH
Q 016212 248 WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSF--ILMIPVTL-IMEGVTFTPAYLQSAG-LNLKEV 323 (393)
Q Consensus 248 ~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~--l~l~p~~~-~~e~~~~~~~~~~~~~-~~~~~l 323 (393)
..|+++++++.+|++...+-.||. +-.+.+.+ |. ..+. -++.|... ....+. ..+... .+ ...
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~------k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~----f~~~~~~~~-~~~ 72 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV------KKWSWETM-WS-VGGIFSWLILPWLIAALLLPD----FWAYYSSFS-GST 72 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc------CCCchhHH-HH-HHHHHHHHHHHHHHHHHHhhh----HHHHHHhcC-HHH
Confidence 579999999999999999999883 12344444 32 2221 11222111 111111 112111 12 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccch-hHHhHHHHHHHHHHHHHHHHhcCccc---c----hhhhhhHHHhhhccC
Q 016212 324 YVRSLIAAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVMFFRTPV---S----AINAFGMITLHSNLH 392 (393)
Q Consensus 324 ~~~~~~s~v~~~l~~~~~~~~l~~~s~-~t~sv~~~lk~v~~il~s~i~fge~~---s----~~~~iG~~lil~g~~ 392 (393)
+...+.+|+.+-..|...+..+++.+- .+..+..-+..+.+.+++.++|||-- + ..-.+|.++++.|+.
T Consensus 73 ~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 73 LLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 344566777777677666666666553 34555666788999999999999743 2 346778888888864
No 88
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=94.73 E-value=0.37 Score=39.26 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=35.4
Q ss_pred HhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 353 HSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 353 ~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
.=++|.+.-+++.+.++++.+|..+...++|+++++.|+.+
T Consensus 71 vPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 71 VPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred ehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 33456788999999999888888999999999999999874
No 89
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.24 E-value=1.4 Score=37.80 Aligned_cols=120 Identities=16% Similarity=0.143 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--HHHHHHHHHHHHHHHHHHHHhhhhccccchhH
Q 016212 120 IIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVLLLWTFNLYRPKVS--STQLAAILPLALVHTLGNLFTNMSLGKVAVSF 197 (393)
Q Consensus 120 ~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~~~~~~~~~~~~~~--~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~ 197 (393)
....-.|-.+-...+.|..-.++-+.++++.+......+..++... ++..++.+.-|++.+.....+......+.+..
T Consensus 18 ~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~ 97 (150)
T COG3238 18 PLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAAT 97 (150)
T ss_pred hhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHH
Confidence 3445577777777778999999999999888766554443333333 33345555666666666666667777777776
Q ss_pred HHHH-hhhhHHHHHHHHHHHh----CCCCCHHHHHHHHHHhhhheee
Q 016212 198 THTI-KATEPFFSVLLSAMFL----GEFPTLWVVGSLIPIMGGVALA 239 (393)
Q Consensus 198 ~~ii-~s~~Pift~lls~l~l----~ek~~~~~~~sl~l~~~Gv~l~ 239 (393)
+.++ .+-+-+..+++..+=. +++++..++++++++++|+.+.
T Consensus 98 t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 98 TIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 6544 4555555555555432 2678999999999999996554
No 90
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=93.83 E-value=0.33 Score=38.13 Aligned_cols=55 Identities=18% Similarity=0.216 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHhcccch-hHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHh
Q 016212 329 IAAICYHAYQQVSYMILQRVSP-VTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITL 387 (393)
Q Consensus 329 ~s~v~~~l~~~~~~~~l~~~s~-~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~li 387 (393)
.-+++++++. ..+++... +.|.+..-+-.+.+.+.|+++|||++|+.+++|++++
T Consensus 38 ~~~~s~~~l~----~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLS----LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHH----HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHH----HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3344444443 45566443 3557777788899999999999999999999999875
No 91
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=93.28 E-value=0.56 Score=45.17 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=68.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccccC-CCChh-hHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHH
Q 016212 247 NWAGFWSAMASNLTNQSRNVLSKKVMVNKEE-ALDNI-TLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVY 324 (393)
Q Consensus 247 ~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~-~~~~~-~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~ 324 (393)
...|..+++.++++.+....++||-..+.++ +.+.- ... .++.++.| +
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~-------------------------~~l~~~~W-----~ 54 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGR-------------------------SYLRRPLW-----W 54 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhh-------------------------HHHhhHHH-----H
Confidence 4689999999999999999999997654322 11110 000 01111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 325 VRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 325 ~~~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
.+++..++ +...| +..+...+....+-.+.+..++..+++-+++||+++...+.|+++++.|..
T Consensus 55 ~G~~~~~~-g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~ 118 (300)
T PF05653_consen 55 IGLLLMVL-GEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSV 118 (300)
T ss_pred HHHHHHhc-chHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhe
Confidence 11111111 11122 233333344444445567789999999999999999999999999999874
No 92
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=91.43 E-value=0.15 Score=47.55 Aligned_cols=74 Identities=15% Similarity=0.323 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhe
Q 016212 164 VSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVA 237 (393)
Q Consensus 164 ~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~ 237 (393)
..++++...+-+|++..++.++-..++|.=-++-.++.+.+..+|..+...+|+++.++++.|++.+.++...+
T Consensus 248 ~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v 321 (346)
T KOG4510|consen 248 HCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTV 321 (346)
T ss_pred ccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHH
Confidence 44666666778899988999999999999999999999999999999999999999999999987765554443
No 93
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=89.06 E-value=0.92 Score=42.51 Aligned_cols=53 Identities=21% Similarity=0.194 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCcc
Q 016212 250 GFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVT 307 (393)
Q Consensus 250 G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~ 307 (393)
|++.++.|.++++...+=.||. +.-|++-.+.+++....+.-....++.+.+.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-----~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~ 53 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-----DTGDGFFFQWVMCSGIFLVGLVVNLILGFPP 53 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-----cCCCcHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 6788999999999998888875 3558888888877766555555444444433
No 94
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.93 E-value=9 Score=32.87 Aligned_cols=134 Identities=9% Similarity=0.072 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHHHH
Q 016212 248 WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRS 327 (393)
Q Consensus 248 ~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~~~ 327 (393)
+...++++.+.++-..+.....++-+.- -+|+--.......+++.+....++.++..... ......+ ..|
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~---~spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~~~pw--W~~--- 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYL---GSPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVASAPW--WAW--- 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHc---CChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hccCCch--HHH---
Confidence 4567788888888888888777764221 14666666666777777776666544432111 1111111 112
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHhHHHH-HHHHHHHHHHHHhc-C---cccchhhhhhHHHhhhccC
Q 016212 328 LIAAICYHAYQQVSYMILQRVSPVTHSVGNC-VKRVVVIVSSVMFF-R---TPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 328 ~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~-lk~v~~il~s~i~f-g---e~~s~~~~iG~~lil~g~~ 392 (393)
..|+.+..|-........+.++.+...... -+.+.+.++.-+=+ | .+++...++|++++++|+.
T Consensus 74 -~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil 142 (150)
T COG3238 74 -IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGIL 142 (150)
T ss_pred -HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHH
Confidence 223333334444467778888876655433 34444455554433 3 5689999999999999853
No 95
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=88.71 E-value=5.4 Score=38.08 Aligned_cols=126 Identities=22% Similarity=0.286 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH-HHHHhhcC-----CC-----CCCHHHHHHHHHHHH
Q 016212 109 LLLMGLWYFFNIIFNIYNKQVLKVYRFPVTVTTCQFGVGTVLVL-LLWTFNLY-----RP-----KVSSTQLAAILPLAL 177 (393)
Q Consensus 109 ~~~~~~w~~~s~~~~~~nK~~l~~f~~P~~lt~~r~~~~~lll~-~~~~~~~~-----~~-----~~~~~~~~~~l~~gl 177 (393)
++++..+.++-...+...+.++.+++ ++.+|+.++.=+.. +.+..... .+ +..++.++.++..+.
T Consensus 174 ~~Ll~~~L~fDgfTn~tQd~lf~~~k----~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 174 ILLLFGYLLFDGFTNATQDSLFKKYK----VSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred HHHHHHHHHHHhhHHhHHHHHhccCC----ccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 34444554444455566677777665 55555555443221 11111111 11 234677788899999
Q ss_pred HHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhee
Q 016212 178 VHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVAL 238 (393)
Q Consensus 178 ~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l 238 (393)
+.+.+..+-++-++.-..=..++|.-+-=+++.+++.+.++.+.++.+|.++...++|..+
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 9999987777777665555566888888999999999999999999999999988888764
No 96
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=86.94 E-value=0.9 Score=40.55 Aligned_cols=51 Identities=10% Similarity=0.164 Sum_probs=48.0
Q ss_pred HHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 342 ~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
...+++++|...+...+++..++-+++++++||.+....++..++.++|+-
T Consensus 71 l~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiV 121 (290)
T KOG4314|consen 71 LLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIV 121 (290)
T ss_pred HHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEE
Confidence 577899999999999999999999999999999999999999999999973
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=83.03 E-value=0.91 Score=41.97 Aligned_cols=99 Identities=23% Similarity=0.235 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCC
Q 016212 140 TTCQFGVGTVLVLLLWTFNLYRPKVSSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGE 219 (393)
Q Consensus 140 t~~r~~~~~lll~~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~e 219 (393)
..+-++++.++..+..-... ..+...++-..-+..|+..+.++++...|-+.+.+++.-.+..+.-+...+.+.+++||
T Consensus 181 aiLPqAiGMv~~ali~~~~~-~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~e 259 (288)
T COG4975 181 AILPQAIGMVIGALILGFFK-MEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGE 259 (288)
T ss_pred hhhHHHHHHHHHHHHHhhcc-cccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEec
Confidence 33445566655543332222 12233444455567789999999999999999999888888999999999999999999
Q ss_pred CCCHHHH----HHHHHHhhhheee
Q 016212 220 FPTLWVV----GSLIPIMGGVALA 239 (393)
Q Consensus 220 k~~~~~~----~sl~l~~~Gv~l~ 239 (393)
|-+.+.+ .+++++++|+.+.
T Consensus 260 kKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 260 KKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred cCchhhhhhhhhhHHHHHHHhhhh
Confidence 9998875 4555555555543
No 98
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=81.98 E-value=3.9 Score=40.15 Aligned_cols=66 Identities=9% Similarity=0.046 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 327 SLIAAICYHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 327 ~~~s~v~~~l~~~~~~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
.+.-|..+++.|+..-..++.++.....++...--.+++.+|.++-+|++|+.+++|..+.++|+-
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GVi 227 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVI 227 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEE
Confidence 344556666666666677788888888888888889999999999999999999999999999973
No 99
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=81.45 E-value=4.8 Score=39.03 Aligned_cols=132 Identities=14% Similarity=0.072 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHHHHHHHH-HHHHhhcC--C---C--CCCHHHHHHHHHH
Q 016212 108 VLLLMGLWYFFNIIFNIYNKQVLKV----YRFPVTVTTCQFGVGTVLVL-LLWTFNLY--R---P--KVSSTQLAAILPL 175 (393)
Q Consensus 108 l~~~~~~w~~~s~~~~~~nK~~l~~----f~~P~~lt~~r~~~~~lll~-~~~~~~~~--~---~--~~~~~~~~~~l~~ 175 (393)
....+.++......-+++.|.++.+ .+ +..+...+--++.+.+. +.+..... . . ..+.. ....+..
T Consensus 164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (316)
T KOG1441|consen 164 GFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLN 241 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHH
Confidence 3444556666667778888888852 33 56666666556666655 54332111 1 0 11122 2233344
Q ss_pred HHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 176 ALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 176 gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
+++..+.|...+..+..+++=++++.....=+++.+.++++++++.++....|..+.++|+.+...
T Consensus 242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 455666678888888898888888888888888888999999999999999999999999987653
No 100
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=79.95 E-value=31 Score=31.65 Aligned_cols=73 Identities=12% Similarity=0.011 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhe
Q 016212 165 SSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVA 237 (393)
Q Consensus 165 ~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~ 237 (393)
+.+...+.+.-|+...+-.+++-+.++-++...++++.++.-...++.+.++++|..++.++.++++++...+
T Consensus 220 ~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~ 292 (309)
T COG5070 220 SVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGA 292 (309)
T ss_pred ChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHH
Confidence 3444556666677777778899999999999999999999999999999999999999999998887665443
No 101
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=73.20 E-value=29 Score=33.48 Aligned_cols=71 Identities=17% Similarity=0.032 Sum_probs=55.8
Q ss_pred HHHHHHHHHHH-HHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeee
Q 016212 170 AAILPLALVHT-LGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (393)
Q Consensus 170 ~~~l~~gl~~~-~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~ 240 (393)
...+.++.+.+ +-.+++.+..+..|+-++++.....-..+.+...++.+++.++....|+.+.+.|-++..
T Consensus 228 ~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 228 LVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 34445555544 457999999999999999999877777777777788888899999999998888877654
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=70.99 E-value=7.6 Score=35.79 Aligned_cols=72 Identities=14% Similarity=0.194 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccchhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhhee
Q 016212 167 TQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVAL 238 (393)
Q Consensus 167 ~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l 238 (393)
..++.+..+++...++..+-+.-..+-..=.-+++..+--+|+.+.+.++++..++.++|++-++.+.|...
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 345667777888888877766655554444455667778899999999999999999999999999988765
No 103
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=70.38 E-value=58 Score=31.86 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHH-HHHHHHHHHHHHHH-HhcCccchhhhhhhcCCchHHHHH
Q 016212 248 WAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSI-ITVMSFILMIPVTL-IMEGVTFTPAYLQSAGLNLKEVYV 325 (393)
Q Consensus 248 ~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~-~~~~s~l~l~p~~~-~~e~~~~~~~~~~~~~~~~~~l~~ 325 (393)
..|+++..++..+.+.+.+=.||. ++ ...+.+.. ..+++ -+.+|... ...-++......+.+.......++
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-----k~-WsWEs~Wlv~gi~s-wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l 78 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-----KG-WSWESYWLVQGIFS-WLIVPWLWALLAIPDFFSIYSATPASTLFWTFL 78 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-----CC-ccHHHHHHHHHHHH-HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHH
Confidence 579999999999999999999885 22 34443333 33343 33444432 233333322222222211111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccc-hhHHhHHHHHHHHHHHHHHHHhcC-------cccchhhhhhHHHhhhccC
Q 016212 326 RSLIAAICYHAYQQVSYMILQRVS-PVTHSVGNCVKRVVVIVSSVMFFR-------TPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 326 ~~~~s~v~~~l~~~~~~~~l~~~s-~~t~sv~~~lk~v~~il~s~i~fg-------e~~s~~~~iG~~lil~g~~ 392 (393)
..++=|+....|.+ .+++++ ++..++.-=+..++..++--++.| ++-....++|.++++.|+.
T Consensus 79 ~G~lWGIGgltfGl----~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIa 149 (344)
T PF06379_consen 79 FGVLWGIGGLTFGL----AMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIA 149 (344)
T ss_pred HHHHHhcchhhHhH----HHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHH
Confidence 12222333333332 233332 223344333344444444334432 2334567889998888874
No 104
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=70.04 E-value=1.1e+02 Score=29.86 Aligned_cols=106 Identities=18% Similarity=0.223 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhccccchhHHH-HHhhhhHHHHHHHHHHHhC-------CCCCHHHHHHHHHHhhhh
Q 016212 165 SSTQLAAILPLALVHTLGNLFTNMSLGKVAVSFTH-TIKATEPFFSVLLSAMFLG-------EFPTLWVVGSLIPIMGGV 236 (393)
Q Consensus 165 ~~~~~~~~l~~gl~~~~~~~~~~~al~~~svs~~~-ii~s~~Pift~lls~l~l~-------ek~~~~~~~sl~l~~~Gv 236 (393)
+.+.+......|++.+++.+.+-.+.+|+.+|..+ +...+.-.+-.++-.++.+ ++-.....+++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 34566667788999999999999999999888874 3355555556666555543 233457789999999999
Q ss_pred eeeecC----C-------cccc-HHHHHHHHHHHHHHHHHHHHHHH
Q 016212 237 ALASVT----E-------VSFN-WAGFWSAMASNLTNQSRNVLSKK 270 (393)
Q Consensus 237 ~l~~~~----~-------~~~~-~~G~~~~l~s~l~~a~~~vl~k~ 270 (393)
++.... | .++| ..|.+.++++.+..++.+.-...
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a 194 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA 194 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence 987632 1 1223 47999999999999988876653
No 105
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=64.89 E-value=5.1 Score=32.00 Aligned_cols=30 Identities=10% Similarity=0.213 Sum_probs=26.7
Q ss_pred HHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 364 VIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 364 ~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
-+.++++++||++++.+..|.+++++++|+
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 356788999999999999999999999874
No 106
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=56.73 E-value=8.9 Score=36.22 Aligned_cols=52 Identities=13% Similarity=0.147 Sum_probs=47.0
Q ss_pred HHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 342 YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 342 ~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
-.+++.++...|-+.-.+..++++++++++++++-+..-..++.+++.|-++
T Consensus 120 nlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l 171 (347)
T KOG1442|consen 120 NLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL 171 (347)
T ss_pred ceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence 4778888888898999999999999999999999999999999999988653
No 107
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=55.77 E-value=1.1e+02 Score=29.15 Aligned_cols=49 Identities=16% Similarity=0.181 Sum_probs=40.5
Q ss_pred HHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhcc
Q 016212 343 MILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNL 391 (393)
Q Consensus 343 ~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~ 391 (393)
..+..+++..+.+.--.-.+++-+++.-+++..++..||+|+..+..|+
T Consensus 105 vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGl 153 (372)
T KOG3912|consen 105 VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGL 153 (372)
T ss_pred HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhh
Confidence 4445666666666666668899999999999999999999999999886
No 108
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.05 E-value=13 Score=29.31 Aligned_cols=30 Identities=10% Similarity=0.285 Sum_probs=26.7
Q ss_pred HHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 364 VIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 364 ~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
-+.+|++.++|++.+.++.|..++++|+|+
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 356799999999999999999999999874
No 109
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=49.74 E-value=1.4e+02 Score=24.08 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheee
Q 016212 205 EPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (393)
Q Consensus 205 ~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~ 239 (393)
+....+.++.+++||++++....+-+.+++++.++
T Consensus 72 tL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 72 TLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 33445667888999999999999999988887654
No 110
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=48.02 E-value=25 Score=28.23 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=47.7
Q ss_pred HHHHHHHhhhhccccchhHHH-HHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheee
Q 016212 179 HTLGNLFTNMSLGKVAVSFTH-TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALA 239 (393)
Q Consensus 179 ~~~~~~~~~~al~~~svs~~~-ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~ 239 (393)
.-++..+|+.-++..|.+.+. +-.+++-.|+++.+..+.-|....+.+++..+++.|+.+.
T Consensus 62 NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 62 NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 344566777788888888774 4567788899999998866777888889999999998764
No 111
>PRK02237 hypothetical protein; Provisional
Probab=42.41 E-value=40 Score=27.16 Aligned_cols=41 Identities=5% Similarity=-0.169 Sum_probs=36.8
Q ss_pred HHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 352 THSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 352 t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
.++..+-+..+.+++-++.+-|+++|...++|.++++.|..
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~ 101 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMA 101 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHH
Confidence 57777888899999999999999999999999999999863
No 112
>PRK10447 HflBKC-binding inner membrane protein; Provisional
Probab=42.20 E-value=2.7e+02 Score=25.44 Aligned_cols=69 Identities=10% Similarity=0.032 Sum_probs=33.7
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHH------hhhheeeecCCccccHHHHHHHHHHHHHHHHHHHH
Q 016212 195 VSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPI------MGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVL 267 (393)
Q Consensus 195 vs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~------~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~vl 267 (393)
-...+.+..+.-+|..+-.+-+ ..|-+...+.+.+.. +.+++-...+ .+....+...++.+.++.+.++
T Consensus 104 ~iV~~A~~~Ta~iF~~ls~~a~-~tk~Dfs~lg~~L~~~l~~li~~~l~~~F~~---s~~~~~~~s~~g~llfsgyily 178 (219)
T PRK10447 104 DVIALALGGTALVFFCCSAYVL-TTRKDMSFLGGMLMAGIVVVLIGMVANIFLQ---LPALHLAISAVFILISSGAILF 178 (219)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666667777776666664 334444444333221 1111101111 1234455556666777777776
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.48 E-value=41 Score=27.02 Aligned_cols=41 Identities=7% Similarity=-0.106 Sum_probs=37.0
Q ss_pred HHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 352 THSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 352 t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
.++..+-+..+.+++-++.+-|++++...++|..+++.|..
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~ 99 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVA 99 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHH
Confidence 57777888899999999999999999999999999998863
No 114
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=38.55 E-value=2e+02 Score=27.49 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=40.6
Q ss_pred chhHHHHHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecCCc
Q 016212 194 AVSFTHTIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVTEV 244 (393)
Q Consensus 194 svs~~~ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~~~ 244 (393)
.+..+.++...-=..|.+++++++.+.+|..-.-+.++++.|+.+=..++.
T Consensus 285 GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 285 GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 444555555555667889999999999999999999999999998766553
No 115
>PRK02237 hypothetical protein; Provisional
Probab=37.72 E-value=46 Score=26.83 Aligned_cols=42 Identities=17% Similarity=0.010 Sum_probs=34.1
Q ss_pred HHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeec
Q 016212 200 TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASV 241 (393)
Q Consensus 200 ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~ 241 (393)
.-.....+...+-.+.+.|+|+++..+++..++++|+.++..
T Consensus 64 AYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 64 AYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 334455566677888899999999999999999999987654
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=37.67 E-value=48 Score=26.66 Aligned_cols=43 Identities=19% Similarity=0.094 Sum_probs=35.1
Q ss_pred HHhhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC
Q 016212 200 TIKATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (393)
Q Consensus 200 ii~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~ 242 (393)
.-.....+...+-.+.+.|+|+++..+++..++++|+.++...
T Consensus 62 AYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 62 AYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3345556667778888899999999999999999999887653
No 117
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=37.44 E-value=33 Score=33.22 Aligned_cols=113 Identities=16% Similarity=0.188 Sum_probs=66.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHHHHHHHHHHHhcCccchhhhhhhcCCchHHHHH
Q 016212 246 FNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYV 325 (393)
Q Consensus 246 ~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~l~l~p~~~~~e~~~~~~~~~~~~~~~~~~l~~ 325 (393)
.+..|.++++.+++..+...++.||-..+.+. ..+. ..|+. ..++...- +|.
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~r----------------a~~gg---~~yl~~~~-----Ww~ 69 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLR----------------AGEGG---YGYLKEPL-----WWA 69 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhh----hccc----------------ccCCC---cchhhhHH-----HHH
Confidence 45789999999999999999998886643210 0000 01111 00111111 111
Q ss_pred HHHHHHHHHHHHHHHH--HHHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 326 RSLIAAICYHAYQQVS--YMILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 326 ~~~~s~v~~~l~~~~~--~~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
+ +.+-..+-..|.++ |.-...+.|+- ++..+...+++..+++|+++....+|++++++|-+
T Consensus 70 G-~ltm~vGei~NFaAYaFAPasLVtPLG-----Alsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst 132 (335)
T KOG2922|consen 70 G-MLTMIVGEIANFAAYAFAPASLVTPLG-----ALSVIISAILASFFLKEKLNLLGILGCVLCVVGST 132 (335)
T ss_pred H-HHHHHHHhHhhHHHHhhchHhhhccch-----hHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccE
Confidence 1 11111122222222 34444555543 46778889999999999999999999999998854
No 118
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=35.99 E-value=1.3e+02 Score=24.97 Aligned_cols=43 Identities=9% Similarity=0.222 Sum_probs=32.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHH
Q 016212 103 SRKIEVLLLMGLWYFFNIIFNIYNKQVLKVYR-FPVTVTTCQFG 145 (393)
Q Consensus 103 ~~~l~l~~~~~~w~~~s~~~~~~nK~~l~~f~-~P~~lt~~r~~ 145 (393)
++.+.++++.+...+.+++..++-|.....++ ||++++-+...
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~ 96 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTF 96 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhccc
Confidence 44677888888888888888888888887764 77777766443
No 119
>PRK10666 ammonium transporter; Provisional
Probab=35.50 E-value=4.9e+02 Score=26.44 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=41.3
Q ss_pred HHhCCCCCHHHH-HHHHHHhhhheeeecCCccccHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCChhhHHHHHHHHHH
Q 016212 215 MFLGEFPTLWVV-GSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSF 293 (393)
Q Consensus 215 l~l~ek~~~~~~-~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~vl~k~~~~~~~~~~~~~~l~~~~~~~s~ 293 (393)
.+.+.|++.... .+++. +.|++....+.-..+..++...++.+..-....+.|+.+ +.++.+|....-....+.+.
T Consensus 272 ~~~~gk~~~~~~~nG~La--GLVaITa~a~~v~p~~A~iiG~vag~v~~~~~~~l~~~~-~iDD~~~a~~vHgv~Gi~G~ 348 (428)
T PRK10666 272 WALRGKPSLLGACSGAIA--GLVGVTPACGYVGVGGALIIGVVAGLAGLWGVTMLKRWL-RVDDPCDVFGVHGVCGIVGC 348 (428)
T ss_pred HHHhCCCCHHHHHHHHhh--hhhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCcCccHhhhHhHHHHH
Confidence 344567775554 33332 222232222322235556666665555444333344422 23456777777777777776
Q ss_pred HHHHHH
Q 016212 294 ILMIPV 299 (393)
Q Consensus 294 l~l~p~ 299 (393)
+....+
T Consensus 349 l~~glf 354 (428)
T PRK10666 349 ILTGIF 354 (428)
T ss_pred HHHHHh
Confidence 655443
No 120
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=35.07 E-value=75 Score=25.57 Aligned_cols=38 Identities=8% Similarity=0.058 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccCC
Q 016212 356 GNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLHL 393 (393)
Q Consensus 356 ~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~~ 393 (393)
.|.+.-.++.+.|..+-.|......++|+.+++.|++|
T Consensus 85 ~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 85 TNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred cchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 34456677777787665566777889999999999875
No 121
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=31.88 E-value=1.6e+02 Score=22.44 Aligned_cols=40 Identities=10% Similarity=0.465 Sum_probs=22.3
Q ss_pred chhhhhhHHHH-HHHHHHHHHHHHH-HHHHHHHHh--cCCchHH
Q 016212 99 TTELSRKIEVL-LLMGLWYFFNIIF-NIYNKQVLK--VYRFPVT 138 (393)
Q Consensus 99 ~~~~~~~l~l~-~~~~~w~~~s~~~-~~~nK~~l~--~f~~P~~ 138 (393)
+..+++.++++ .+.++|.+.+.+. .++...+-+ -+++|+-
T Consensus 4 ~~yWr~n~rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlg 47 (81)
T PF13937_consen 4 RAYWRKNLRLIAILLAIWFVVSFGVGILFADELNQITFGGFPLG 47 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChH
Confidence 34455544443 4456898888887 555555422 1355633
No 122
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=31.37 E-value=90 Score=25.01 Aligned_cols=41 Identities=15% Similarity=-0.055 Sum_probs=33.6
Q ss_pred hhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHhhhheeeecC
Q 016212 202 KATEPFFSVLLSAMFLGEFPTLWVVGSLIPIMGGVALASVT 242 (393)
Q Consensus 202 ~s~~Pift~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~~~ 242 (393)
.....+...+-.++..|.+++++.+.+..++++|+.++...
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 44555666777888889999999999999999999887654
No 123
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=29.90 E-value=18 Score=33.96 Aligned_cols=50 Identities=18% Similarity=0.173 Sum_probs=44.4
Q ss_pred HHhcccchhHHhHHHHHHHHHHHHHHHHhcCcccchhhhhhHHHhhhccC
Q 016212 343 MILQRVSPVTHSVGNCVKRVVVIVSSVMFFRTPVSAINAFGMITLHSNLH 392 (393)
Q Consensus 343 ~~l~~~s~~t~sv~~~lk~v~~il~s~i~fge~~s~~~~iG~~lil~g~~ 392 (393)
..-+.++-+..+...+-..+...+++|++++.+-.+.++.|.++.++|+.
T Consensus 97 ~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvv 146 (336)
T KOG2766|consen 97 KAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVV 146 (336)
T ss_pred eehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceE
Confidence 44567777788888889999999999999999999999999999999974
No 124
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=29.28 E-value=2.7e+02 Score=25.77 Aligned_cols=18 Identities=6% Similarity=0.080 Sum_probs=10.1
Q ss_pred ChhhHHHHHHHHHHHHHH
Q 016212 280 DNITLFSIITVMSFILMI 297 (393)
Q Consensus 280 ~~~~l~~~~~~~s~l~l~ 297 (393)
.+.-.+.|..+.+.+++.
T Consensus 192 ~~~~~~vya~lgAllf~~ 209 (237)
T KOG2322|consen 192 GPILVMVYAALGALLFCG 209 (237)
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 345556666666555543
No 125
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=24.58 E-value=7.1e+02 Score=24.82 Aligned_cols=94 Identities=10% Similarity=0.114 Sum_probs=42.6
Q ss_pred HHHhhhhHHHHHHHHHHHhCCCCCHHHH-HHHHHHhhhheeeecCCccccHHHHHHHHHH-HHHHHHHHHHHHHhhcccc
Q 016212 199 HTIKATEPFFSVLLSAMFLGEFPTLWVV-GSLIPIMGGVALASVTEVSFNWAGFWSAMAS-NLTNQSRNVLSKKVMVNKE 276 (393)
Q Consensus 199 ~ii~s~~Pift~lls~l~l~ek~~~~~~-~sl~l~~~Gv~l~~~~~~~~~~~G~~~~l~s-~l~~a~~~vl~k~~~~~~~ 276 (393)
+.+..+.-.++.++--.+.++|++.... .+.+.+.+++ ....+.-..+..++..+++ .+++-....+.||. +.+
T Consensus 227 T~la~a~g~l~~~~~~~~~~gk~~~~~~~nG~laGlVai--ta~~~~v~p~~A~~iG~iag~i~~~~~~~l~~~~--~iD 302 (399)
T PF00909_consen 227 TLLAAAAGGLTWLLISYLLSGKWSMVGICNGALAGLVAI--TAGAGYVTPWGALLIGAIAGLISYFGVSWLLKRL--KID 302 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHH--TTTTTTS-HHHHHHHHHHHHHHHHHHHHHHHHHH--TS-
T ss_pred hhhhHHHHHHHHHHhhhccccccchhhhhhhhhhhhhhe--ecccCCCcHHHHHHhhhhHhhhhhhheeccccee--Eec
Confidence 4444444444444444445566666553 3443333333 2222222234455555555 44454444444543 223
Q ss_pred CCCChhhHHHHHHHHHHHHH
Q 016212 277 EALDNITLFSIITVMSFILM 296 (393)
Q Consensus 277 ~~~~~~~l~~~~~~~s~l~l 296 (393)
+..|...+-....+.+.+..
T Consensus 303 D~~~~~~vHg~~Gi~G~i~~ 322 (399)
T PF00909_consen 303 DPVGAFAVHGVGGIWGTILT 322 (399)
T ss_dssp HTTGHHHHCHHHHHHHHHHH
T ss_pred cccceEeeeeccHHHHHHHH
Confidence 45566666666666665544
No 126
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.34 E-value=29 Score=32.87 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhccccchhHHHHHhhhh
Q 016212 178 VHTLGNLFTNMSLGKVAVSFTHTIKATE 205 (393)
Q Consensus 178 ~~~~~~~~~~~al~~~svs~~~ii~s~~ 205 (393)
+.++..++|.+-++...+++.+++..+.
T Consensus 117 lLaL~vW~Ym~lLr~~GAs~WtiLaFcL 144 (381)
T PF05297_consen 117 LLALGVWFYMWLLRELGASFWTILAFCL 144 (381)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3344445555444555555555544433
No 127
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.88 E-value=4.1e+02 Score=21.10 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=27.4
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHhhhheeee
Q 016212 208 FSVLLSAMFLGEFPTLWVVGSLIPIMGGVALAS 240 (393)
Q Consensus 208 ft~lls~l~l~ek~~~~~~~sl~l~~~Gv~l~~ 240 (393)
.-+.++.+.++|.+++..+.+-+.+.+|+.++.
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 345678889999999999999999988887653
No 128
>COG3162 Predicted membrane protein [Function unknown]
Probab=21.33 E-value=4.2e+02 Score=21.04 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=39.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CC----chHHHHHHHHHHHHHHHHHHHH
Q 016212 100 TELSRKIEVLLLMGLWYFFNIIFNIYNKQVLKV--YR----FPVTVTTCQFGVGTVLVLLLWT 156 (393)
Q Consensus 100 ~~~~~~l~l~~~~~~w~~~s~~~~~~nK~~l~~--f~----~P~~lt~~r~~~~~lll~~~~~ 156 (393)
+..+-...+.+..+.||+..+.+.-++|..+.. ++ .-+.+...+++++.++..++..
T Consensus 21 kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~~~~~Vt~Gip~gvg~fv~tfVlt~IYv~ 83 (102)
T COG3162 21 KRRRFAVPLTLIFLVVYFGFILLIAFAPGWLATPLFGASVTRGIPFGVGVFVMTFVLTGIYVR 83 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcccCCceehhHhHHHHHHHHHHHHHHHHhh
Confidence 333334556667789999999999899966663 33 2366788888888888766543
No 129
>TIGR03647 Na_symport_sm probable solute:sodium symporter small subunit. Members of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments.
Probab=20.22 E-value=3.9e+02 Score=20.14 Aligned_cols=31 Identities=19% Similarity=0.554 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc---CCchHH
Q 016212 108 VLLLMGLWYFFNIIFNIYNKQVLKV---YRFPVT 138 (393)
Q Consensus 108 l~~~~~~w~~~s~~~~~~nK~~l~~---f~~P~~ 138 (393)
+....++|.+.+.+..++-...++. +++|+-
T Consensus 10 i~~lL~iWf~vsfg~~~lf~~~Ln~~~~~GfPlg 43 (77)
T TIGR03647 10 IAVLLAIWFVVSFGAGILFADELNSFTFFGFPLG 43 (77)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHcCCeeCCCChH
Confidence 4444668888887766533334443 356643
Done!