Query 016214
Match_columns 393
No_of_seqs 237 out of 1140
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 04:50:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016214.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016214hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1.3E-25 2.9E-30 222.3 31.5 311 52-391 23-356 (358)
2 PF06027 DUF914: Eukaryotic pr 99.9 4.1E-25 8.9E-30 215.3 26.4 307 35-366 7-314 (334)
3 TIGR00817 tpt Tpt phosphate/ph 99.9 1.3E-24 2.8E-29 211.0 26.8 274 58-359 18-295 (302)
4 PTZ00343 triose or hexose phos 99.9 1.9E-23 4.2E-28 206.9 29.6 282 55-358 62-349 (350)
5 KOG2765 Predicted membrane pro 99.9 9.2E-23 2E-27 195.3 22.3 314 34-363 7-396 (416)
6 PF08449 UAA: UAA transporter 99.9 1.1E-21 2.4E-26 190.7 28.1 296 45-362 3-302 (303)
7 KOG2234 Predicted UDP-galactos 99.9 1.2E-20 2.5E-25 181.2 26.8 310 45-370 18-334 (345)
8 PRK11272 putative DMT superfam 99.9 3.8E-20 8.2E-25 179.0 28.8 277 43-359 9-287 (292)
9 PRK11453 O-acetylserine/cystei 99.9 3E-19 6.4E-24 173.3 29.4 277 46-359 8-289 (299)
10 TIGR00950 2A78 Carboxylate/Ami 99.9 2.1E-19 4.5E-24 170.1 25.2 255 56-352 3-259 (260)
11 KOG3912 Predicted integral mem 99.8 5.7E-20 1.2E-24 169.8 17.5 302 48-357 9-334 (372)
12 PRK15430 putative chlorampheni 99.8 3.7E-19 8E-24 172.5 23.9 282 43-362 9-290 (296)
13 PRK10532 threonine and homoser 99.8 2.7E-18 5.9E-23 166.2 27.8 274 45-364 15-288 (293)
14 KOG1441 Glucose-6-phosphate/ph 99.8 2.3E-20 5E-25 180.0 11.0 296 40-364 14-314 (316)
15 PRK11689 aromatic amino acid e 99.8 7.2E-18 1.6E-22 163.4 24.6 273 46-358 8-288 (295)
16 KOG1443 Predicted integral mem 99.8 4.8E-18 1E-22 159.2 21.1 232 112-355 79-313 (349)
17 PF04142 Nuc_sug_transp: Nucle 99.8 2.8E-17 6.1E-22 154.7 19.7 221 114-347 15-243 (244)
18 TIGR03340 phn_DUF6 phosphonate 99.7 7.4E-16 1.6E-20 148.2 25.1 216 118-354 64-280 (281)
19 COG0697 RhaT Permeases of the 99.7 6.2E-14 1.4E-18 133.6 28.4 210 124-358 77-288 (292)
20 TIGR00776 RhaT RhaT L-rhamnose 99.7 1.4E-14 3E-19 140.2 21.9 267 50-358 9-289 (290)
21 TIGR00688 rarD rarD protein. T 99.6 2.7E-14 5.8E-19 135.4 20.6 165 44-229 4-168 (256)
22 KOG1444 Nucleotide-sugar trans 99.6 3.6E-13 7.9E-18 128.0 23.2 288 51-366 21-309 (314)
23 KOG1442 GDP-fucose transporter 99.6 1.8E-15 4E-20 139.8 5.0 227 131-372 116-342 (347)
24 KOG1580 UDP-galactose transpor 99.5 5.5E-13 1.2E-17 121.0 16.7 225 119-356 87-312 (337)
25 PF03151 TPT: Triose-phosphate 99.5 5.1E-13 1.1E-17 116.3 13.6 150 208-357 1-153 (153)
26 KOG1583 UDP-N-acetylglucosamin 99.5 1.5E-13 3.2E-18 127.5 10.2 223 127-356 74-313 (330)
27 KOG1582 UDP-galactose transpor 99.5 1.8E-12 4E-17 119.9 17.3 296 35-360 36-335 (367)
28 COG2962 RarD Predicted permeas 99.4 2E-10 4.4E-15 108.1 22.9 269 56-365 21-291 (293)
29 KOG4510 Permease of the drug/m 99.3 2.5E-13 5.5E-18 125.4 0.5 209 131-357 111-325 (346)
30 KOG1581 UDP-galactose transpor 99.3 3.5E-10 7.5E-15 106.7 20.6 231 118-361 84-317 (327)
31 COG5006 rhtA Threonine/homoser 99.3 6.1E-10 1.3E-14 102.6 21.5 253 59-358 29-283 (292)
32 KOG2766 Predicted membrane pro 99.2 6.2E-12 1.3E-16 115.5 2.4 281 36-355 13-297 (336)
33 KOG4314 Predicted carbohydrate 99.2 9.6E-11 2.1E-15 104.0 9.5 224 117-361 53-280 (290)
34 PF00892 EamA: EamA-like trans 98.9 3.9E-09 8.5E-14 87.7 8.5 121 54-187 3-124 (126)
35 COG5070 VRG4 Nucleotide-sugar 98.9 4.4E-08 9.4E-13 88.8 15.2 280 51-360 11-299 (309)
36 PF13536 EmrE: Multidrug resis 98.9 5.6E-09 1.2E-13 86.7 8.4 71 121-192 38-109 (113)
37 TIGR00803 nst UDP-galactose tr 98.7 6.5E-08 1.4E-12 89.8 10.9 54 302-355 169-222 (222)
38 PF06800 Sugar_transport: Suga 98.6 1.8E-06 3.9E-11 81.9 17.4 113 114-228 42-159 (269)
39 COG2510 Predicted membrane pro 98.6 1.8E-07 3.9E-12 77.9 7.4 133 45-188 6-138 (140)
40 TIGR00950 2A78 Carboxylate/Ami 98.3 1.2E-05 2.7E-10 75.8 14.8 129 43-184 129-259 (260)
41 PRK15051 4-amino-4-deoxy-L-ara 98.3 6.4E-06 1.4E-10 68.3 10.7 62 127-188 47-108 (111)
42 PF03151 TPT: Triose-phosphate 98.3 7.3E-06 1.6E-10 71.0 11.7 140 46-186 4-150 (153)
43 PF05653 Mg_trans_NIPA: Magnes 98.3 2.5E-05 5.4E-10 76.0 15.2 63 128-190 61-123 (300)
44 PLN00411 nodulin MtN21 family 98.2 3.1E-05 6.7E-10 77.2 15.0 144 38-190 185-329 (358)
45 PF00892 EamA: EamA-like trans 98.1 1.2E-05 2.7E-10 66.4 8.7 123 218-357 2-126 (126)
46 PRK13499 rhamnose-proton sympo 98.1 0.00059 1.3E-08 67.3 20.4 110 114-224 70-191 (345)
47 PRK10532 threonine and homoser 98.1 0.00011 2.3E-09 71.2 15.0 131 43-188 149-280 (293)
48 COG2510 Predicted membrane pro 98.0 2.3E-05 5E-10 65.4 8.3 131 209-355 5-137 (140)
49 PRK11689 aromatic amino acid e 98.0 0.00016 3.5E-09 70.1 15.5 66 122-187 220-285 (295)
50 PRK11272 putative DMT superfam 98.0 0.00019 4.1E-09 69.4 15.1 65 124-188 219-284 (292)
51 PRK15430 putative chlorampheni 97.9 0.00035 7.7E-09 67.7 14.8 139 204-357 5-145 (296)
52 TIGR03340 phn_DUF6 phosphonate 97.9 5.1E-05 1.1E-09 73.0 8.7 70 117-186 211-280 (281)
53 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00042 9.2E-09 67.1 14.2 130 43-188 153-287 (290)
54 TIGR00688 rarD rarD protein. T 97.8 0.00047 1E-08 65.2 13.6 139 207-357 2-142 (256)
55 TIGR00817 tpt Tpt phosphate/ph 97.7 0.00041 8.8E-09 67.3 11.8 144 43-188 146-292 (302)
56 PRK11453 O-acetylserine/cystei 97.6 0.0025 5.4E-08 61.8 15.1 67 122-188 219-286 (299)
57 PRK02971 4-amino-4-deoxy-L-ara 97.5 0.00066 1.4E-08 57.7 9.4 61 128-188 59-121 (129)
58 PTZ00343 triose or hexose phos 97.5 0.0025 5.4E-08 63.4 14.3 145 43-187 195-346 (350)
59 PRK10452 multidrug efflux syst 97.5 0.00087 1.9E-08 56.2 9.0 62 127-188 40-102 (120)
60 KOG2922 Uncharacterized conser 97.4 0.00031 6.7E-09 67.5 6.8 64 128-191 75-138 (335)
61 PRK10650 multidrug efflux syst 97.4 0.0019 4.2E-08 53.2 9.8 60 128-187 46-106 (109)
62 COG2076 EmrE Membrane transpor 97.3 0.0022 4.7E-08 52.3 9.2 60 128-187 41-101 (106)
63 PRK09541 emrE multidrug efflux 97.3 0.0026 5.6E-08 52.6 9.6 61 128-188 41-102 (110)
64 PRK11431 multidrug efflux syst 97.2 0.003 6.4E-08 51.7 9.6 60 128-187 40-100 (105)
65 PF13536 EmrE: Multidrug resis 97.2 0.0049 1.1E-07 50.9 11.0 49 313-361 62-110 (113)
66 COG4975 GlcU Putative glucose 97.1 9.3E-05 2E-09 68.5 -0.2 144 68-228 25-173 (288)
67 COG0697 RhaT Permeases of the 97.1 0.019 4.2E-07 54.2 14.9 74 115-188 212-286 (292)
68 PRK10452 multidrug efflux syst 96.9 0.0099 2.2E-07 49.8 10.2 40 320-359 66-105 (120)
69 COG2962 RarD Predicted permeas 96.9 0.026 5.6E-07 53.9 13.7 140 205-358 5-145 (293)
70 PF06800 Sugar_transport: Suga 96.9 0.016 3.4E-07 55.3 11.9 114 46-177 142-255 (269)
71 PF08449 UAA: UAA transporter 96.5 0.032 7E-07 54.2 11.8 140 43-187 155-295 (303)
72 PF00893 Multi_Drug_Res: Small 96.4 0.012 2.7E-07 46.9 6.8 52 128-179 40-92 (93)
73 PRK02971 4-amino-4-deoxy-L-ara 96.3 0.017 3.8E-07 49.0 7.6 35 324-358 87-123 (129)
74 TIGR00803 nst UDP-galactose tr 95.9 0.026 5.5E-07 52.2 7.3 121 58-185 97-220 (222)
75 PF10639 UPF0546: Uncharacteri 95.8 0.022 4.8E-07 47.1 5.8 59 128-186 52-111 (113)
76 PRK09541 emrE multidrug efflux 95.7 0.065 1.4E-06 44.3 7.9 37 322-358 68-104 (110)
77 COG2076 EmrE Membrane transpor 95.6 0.057 1.2E-06 44.1 7.1 37 322-358 68-104 (106)
78 COG5006 rhtA Threonine/homoser 95.6 0.068 1.5E-06 50.1 8.5 72 114-185 206-278 (292)
79 PF06027 DUF914: Eukaryotic pr 95.5 0.13 2.9E-06 50.7 11.0 133 48-190 174-306 (334)
80 PRK11431 multidrug efflux syst 95.5 0.07 1.5E-06 43.7 7.6 37 322-358 67-103 (105)
81 PRK15051 4-amino-4-deoxy-L-ara 95.5 0.065 1.4E-06 44.3 7.5 36 320-355 72-107 (111)
82 PRK10650 multidrug efflux syst 95.2 0.25 5.4E-06 40.7 9.8 35 322-356 73-107 (109)
83 PRK13499 rhamnose-proton sympo 95.1 0.59 1.3E-05 46.3 13.9 76 114-190 257-342 (345)
84 PF05653 Mg_trans_NIPA: Magnes 94.5 0.33 7.1E-06 47.3 10.3 40 320-359 85-124 (300)
85 PF04142 Nuc_sug_transp: Nucle 94.3 0.11 2.4E-06 49.0 6.5 55 308-362 40-94 (244)
86 PF07857 DUF1632: CEO family ( 94.3 0.069 1.5E-06 50.6 5.0 29 337-365 114-142 (254)
87 PF04657 DUF606: Protein of un 93.1 1.2 2.7E-05 38.1 10.3 104 71-186 29-138 (138)
88 COG5070 VRG4 Nucleotide-sugar 93.0 0.89 1.9E-05 42.1 9.6 126 56-188 169-295 (309)
89 KOG2765 Predicted membrane pro 91.9 0.55 1.2E-05 46.5 7.3 140 40-188 245-389 (416)
90 PF04657 DUF606: Protein of un 91.2 6.4 0.00014 33.7 12.5 128 209-353 3-137 (138)
91 KOG1441 Glucose-6-phosphate/ph 90.0 0.63 1.4E-05 45.6 5.8 145 35-187 158-305 (316)
92 KOG2234 Predicted UDP-galactos 88.9 12 0.00027 36.9 13.7 52 307-358 114-165 (345)
93 PF00893 Multi_Drug_Res: Small 88.8 1.1 2.5E-05 35.5 5.6 29 320-348 65-93 (93)
94 KOG1583 UDP-N-acetylglucosamin 88.7 3.3 7.2E-05 39.6 9.3 156 30-188 152-313 (330)
95 KOG4510 Permease of the drug/m 88.4 0.5 1.1E-05 44.8 3.7 72 115-186 251-322 (346)
96 KOG1444 Nucleotide-sugar trans 88.0 5.2 0.00011 38.9 10.4 122 61-188 176-299 (314)
97 PF06379 RhaT: L-rhamnose-prot 87.7 4.3 9.4E-05 40.0 9.7 110 115-224 71-190 (344)
98 COG4975 GlcU Putative glucose 87.2 0.27 5.9E-06 46.0 1.1 75 113-188 206-284 (288)
99 COG3238 Uncharacterized protei 86.1 16 0.00035 31.8 11.4 53 205-263 3-55 (150)
100 KOG1582 UDP-galactose transpor 83.9 26 0.00057 33.6 12.5 113 67-187 216-330 (367)
101 KOG1581 UDP-galactose transpor 77.7 18 0.00039 35.2 9.3 63 306-368 104-166 (327)
102 PF10639 UPF0546: Uncharacteri 74.8 6.6 0.00014 32.5 4.9 37 318-354 75-111 (113)
103 KOG1623 Multitransmembrane pro 73.6 32 0.0007 32.4 9.8 75 150-229 76-150 (243)
104 KOG1580 UDP-galactose transpor 71.6 6.7 0.00015 36.7 4.6 63 124-186 248-310 (337)
105 PRK09804 putative cryptic C4-d 69.0 1.4E+02 0.0029 31.0 13.8 26 344-369 202-227 (455)
106 COG3238 Uncharacterized protei 67.5 85 0.0018 27.4 10.5 107 69-186 31-143 (150)
107 PRK06638 NADH:ubiquinone oxido 64.6 1.1E+02 0.0024 27.8 17.7 35 326-360 133-167 (198)
108 PF06570 DUF1129: Protein of u 63.7 91 0.002 28.4 10.6 29 29-57 64-96 (206)
109 KOG4831 Unnamed protein [Funct 62.4 10 0.00022 30.9 3.5 57 130-186 65-122 (125)
110 PF06379 RhaT: L-rhamnose-prot 62.1 1.4E+02 0.003 29.6 11.9 78 113-190 255-341 (344)
111 KOG2922 Uncharacterized conser 59.5 3.2 7E-05 40.4 0.2 45 318-362 97-141 (335)
112 PF04342 DUF486: Protein of un 58.0 12 0.00026 30.5 3.2 30 324-353 75-104 (108)
113 PF02694 UPF0060: Uncharacteri 54.0 32 0.0007 28.1 5.0 45 147-191 61-105 (107)
114 PRK02237 hypothetical protein; 52.5 1.1E+02 0.0025 25.0 7.9 46 146-191 62-107 (109)
115 COG4657 RnfA Predicted NADH:ub 51.9 1.7E+02 0.0037 25.9 11.8 104 117-233 47-158 (193)
116 PF07857 DUF1632: CEO family ( 48.8 2E+02 0.0044 27.3 10.4 116 117-232 55-208 (254)
117 PF05297 Herpes_LMP1: Herpesvi 47.0 6.4 0.00014 37.7 0.0 49 136-184 42-92 (381)
118 COG3169 Uncharacterized protei 45.1 34 0.00074 27.5 3.8 33 323-355 81-113 (116)
119 COG1742 Uncharacterized conser 42.1 83 0.0018 25.6 5.6 46 146-191 61-106 (109)
120 PF05961 Chordopox_A13L: Chord 41.4 42 0.00092 25.0 3.5 19 341-359 6-25 (68)
121 PF04342 DUF486: Protein of un 39.1 38 0.00083 27.6 3.3 29 157-185 76-104 (108)
122 PF05915 DUF872: Eukaryotic pr 39.1 70 0.0015 26.6 5.0 17 39-55 40-56 (115)
123 KOG4314 Predicted carbohydrate 38.5 11 0.00023 34.5 0.1 42 316-357 84-125 (290)
124 PF04971 Lysis_S: Lysis protei 34.4 46 0.00099 24.9 2.8 25 345-369 42-66 (68)
125 PF15471 TMEM171: Transmembran 34.1 46 0.00099 31.8 3.4 26 339-364 161-186 (319)
126 KOG1442 GDP-fucose transporter 33.4 33 0.00072 33.0 2.5 111 68-184 211-322 (347)
127 PF05884 ZYG-11_interact: Inte 32.9 4.7E+02 0.01 25.5 15.2 36 31-66 93-128 (299)
128 PF11139 DUF2910: Protein of u 31.7 3.9E+02 0.0086 24.2 10.4 72 115-187 113-209 (214)
129 PRK02237 hypothetical protein; 31.4 70 0.0015 26.3 3.7 37 323-359 71-107 (109)
130 PF11023 DUF2614: Protein of u 30.3 43 0.00094 27.6 2.3 54 166-220 5-58 (114)
131 PF12868 DUF3824: Domain of un 28.9 72 0.0016 27.4 3.6 20 348-367 17-36 (137)
132 PF06609 TRI12: Fungal trichot 28.6 7.7E+02 0.017 26.6 24.8 21 167-187 377-397 (599)
133 PRK02935 hypothetical protein; 28.5 38 0.00082 27.6 1.7 54 165-219 5-58 (110)
134 PF15102 TMEM154: TMEM154 prot 27.6 59 0.0013 28.2 2.8 21 345-365 69-89 (146)
135 COG3169 Uncharacterized protei 27.2 1.4E+02 0.0031 24.1 4.6 37 150-186 72-112 (116)
136 PF15108 TMEM37: Voltage-depen 27.2 2.2E+02 0.0048 25.0 6.2 54 201-258 116-169 (184)
137 PF02694 UPF0060: Uncharacteri 26.7 76 0.0016 26.0 3.1 37 323-359 69-105 (107)
138 KOG3912 Predicted integral mem 25.8 65 0.0014 31.2 3.0 37 322-358 123-159 (372)
139 PF04246 RseC_MucC: Positive r 25.3 1E+02 0.0022 25.9 4.0 15 341-355 96-110 (135)
140 PRK12437 prolipoprotein diacyl 25.0 77 0.0017 30.3 3.5 24 336-359 234-257 (269)
141 PRK13108 prolipoprotein diacyl 24.3 1.4E+02 0.003 31.0 5.3 24 337-360 254-277 (460)
142 PF03773 DUF318: Predicted per 24.1 1.8E+02 0.004 28.1 6.0 42 320-361 95-138 (307)
143 PF11044 TMEMspv1-c74-12: Plec 24.0 57 0.0012 22.2 1.6 7 350-356 21-27 (49)
144 KOG3762 Predicted transporter 24.0 5.7E+02 0.012 27.4 9.7 32 339-370 530-561 (618)
145 PF01102 Glycophorin_A: Glycop 22.1 79 0.0017 26.5 2.6 8 352-359 83-90 (122)
146 KOG1443 Predicted integral mem 21.3 8E+02 0.017 24.2 11.8 74 114-187 240-313 (349)
147 PRK01844 hypothetical protein; 20.6 1.8E+02 0.004 22.0 3.9 28 40-67 4-31 (72)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=1.3e-25 Score=222.34 Aligned_cols=311 Identities=14% Similarity=0.151 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 016214 52 GGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAIS 131 (393)
Q Consensus 52 ~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~ 131 (393)
++..+..++.|..++.|.++..+.++|..++..++++..+..+++ ++. ++..++.+...+.+|++.+..+
T Consensus 23 ~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~-~~~---------~~~~~~~~~~l~l~g~~g~~~~ 92 (358)
T PLN00411 23 TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRS-RSL---------PPLSVSILSKIGLLGFLGSMYV 92 (358)
T ss_pred HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHh-ccc---------CcchHHHHHHHHHHHHHHHHHH
Confidence 455666788899999999999999999999888877765542211 111 1112345555555677654566
Q ss_pred HHHHhhhcccchHHHHHHHHhhHHHHHHHHHHH------ccCCCChhHHHHHHHHHHHHHHhhccCCCCC----------
Q 016214 132 LMYSFGYLYLPVSTYSLICATQLAFNALFSFFL------NSLKFDPYIINSLVLLTISSILLAFNNDEST---------- 195 (393)
Q Consensus 132 ~l~~~sl~ylsvs~asll~~~~pift~l~s~i~------~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~---------- 195 (393)
.+++.|++|+|++.++++.+++|+|++++++++ +|||++++++.|++++++|+.++..+++...
T Consensus 93 ~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~ 172 (358)
T PLN00411 93 ITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLN 172 (358)
T ss_pred HHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccc
Confidence 689999999999999999999999999999999 6999999999999999999997654322100
Q ss_pred ----C-CCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHH-HHHhcCcchh
Q 016214 196 ----E-SSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILV-GLFASGEWEG 269 (393)
Q Consensus 196 ----~-~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~-~~~~~~~~~~ 269 (393)
. +..........|++++++|+++||+|.++.++..+| ++.....++|.+.++.+.+.+ ....+++ +
T Consensus 173 ~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~------~~~~~~~t~~~~~~~~~~~~~~~l~~~~~-~- 244 (358)
T PLN00411 173 FRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE------YPAAFTVSFLYTVCVSIVTSMIGLVVEKN-N- 244 (358)
T ss_pred ccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCcHhHHHHHHHHHHHHHHHHHHHHHccC-C-
Confidence 0 000111224679999999999999999988877665 234445666766665554433 3332221 0
Q ss_pred hhhhhhhccchh-HHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHH
Q 016214 270 LSGEMEEFKLGK-VSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLA 348 (393)
Q Consensus 270 l~~~~~~~~~~~-~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~li 348 (393)
.+.....+.... ...+..+ ..++++..++.+ +...++..+++...++|+++.++|++++||++++.+++|++++
T Consensus 245 ~~~~~~~~~~~~~~i~y~~i-~t~lay~lw~~~----v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LI 319 (358)
T PLN00411 245 PSVWIIHFDITLITIVTMAI-ITSVYYVIHSWT----VRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILI 319 (358)
T ss_pred cccceeccchHHHHHHHHHH-HHHHHHHHHHHH----HhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 000000111110 0111222 233334334332 3467777788888888889999999999999999999999999
Q ss_pred HHHHHHHHhhcccccccccccCCCCCCCCCCCCCCccCCCccc
Q 016214 349 IWGFLSYFYHHYLDDFKSKTKDGTAIEAPEASTTPRMHEPEQD 391 (393)
Q Consensus 349 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
+.|+++..+++.+|.|+.++.. ++++.||-.-....|
T Consensus 320 l~Gv~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 356 (358)
T PLN00411 320 TLGFYAVMWGKANEEKDQLLSF------SGKEKTPLLLNGKND 356 (358)
T ss_pred HHHHHHHHhhhhhhhhhcccCc------cccccchhhhhcccc
Confidence 9999998876655543333222 134447765443333
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=4.1e-25 Score=215.26 Aligned_cols=307 Identities=15% Similarity=0.182 Sum_probs=205.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchH
Q 016214 35 QNWKWWIRICFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFL 114 (393)
Q Consensus 35 ~~~~~w~~~~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (393)
++|+.|....+.=++.++ .+++...+.+.-++|-|.|.++++.+.+...+...+..+.+++.++- . ...+
T Consensus 7 ~~~~~~~~~~lgQ~lsl~-~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~---~------~~~~ 76 (334)
T PF06027_consen 7 FTRRFWIVLLLGQVLSLC-ITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKW---L------KVLK 76 (334)
T ss_pred HHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccc---h------hhcc
Confidence 556666655554333332 23444555555555888899899776644444333333222111110 0 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCC
Q 016214 115 TIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDES 194 (393)
Q Consensus 115 ~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~ 194 (393)
+....++.++++-...|++.+.|++||+++.++++.++..+|+++++++++|+|+++.|+.|+++++.|++++...|..+
T Consensus 77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~ 156 (334)
T PF06027_consen 77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS 156 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence 33455666688878889999999999999999999999999999999999999999999999999999999876665411
Q ss_pred CCCCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhh
Q 016214 195 TESSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEM 274 (393)
Q Consensus 195 ~~~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~ 274 (393)
++ ++.+..+.++|++++++|++.||++-++.|+..++ . +..++..+.+++++++..+-..+. |++.+..
T Consensus 157 ~~-~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~----~---~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~-- 225 (334)
T PF06027_consen 157 GS-DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKK----A---PRVEFLGMLGLFGFIISGIQLAIL-ERSGIES-- 225 (334)
T ss_pred cc-cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhccc----C---CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhc--
Confidence 11 11233457999999999999999999988876655 2 456778888899888776644332 3343322
Q ss_pred hhccchhHHHHHHHHHHHHH-HHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHH
Q 016214 275 EEFKLGKVSYLMTLIWTAIG-WQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFL 353 (393)
Q Consensus 275 ~~~~~~~~~~~~~l~~~ai~-~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~ 353 (393)
-.|... . ...+++.+++ +..+.+.- -+....++...|+-.....|.+.++++++||+++++..++|.++++.|++
T Consensus 226 ~~w~~~--~-~~~~v~~~~~lf~~y~l~p-~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~v 301 (334)
T PF06027_consen 226 IHWTSQ--V-IGLLVGYALCLFLFYSLVP-IVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFV 301 (334)
T ss_pred cCCChh--h-HHHHHHHHHHHHHHHHHHH-HHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhh
Confidence 123221 1 1222333332 22222111 12345666666664444567899999999999999999999999999999
Q ss_pred HHHhhcccccccc
Q 016214 354 SYFYHHYLDDFKS 366 (393)
Q Consensus 354 ~~~~~~~~~~~~~ 366 (393)
+|+..+.++.+++
T Consensus 302 vy~~~~~~~~~~~ 314 (334)
T PF06027_consen 302 VYNLAESPEEEAR 314 (334)
T ss_pred eEEccCCcccccc
Confidence 9998776655443
No 3
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.94 E-value=1.3e-24 Score=210.98 Aligned_cols=274 Identities=15% Similarity=0.101 Sum_probs=188.9
Q ss_pred HHHHHHhhhcCCccceeehhhhh-cchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh
Q 016214 58 TLLGRLYYAEGGKSKWMAGLVQP-AGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMYSF 136 (393)
Q Consensus 58 ~ll~r~~~~~g~~~~~~~t~~~~-~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~~~ 136 (393)
.++.|...++ .+.++..+.+++ .+...+.+. +. ...++. ++..++.++..++.|++.+.+..+.|.
T Consensus 18 ~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~~-~~--~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (302)
T TIGR00817 18 NIYNKKLLNV-FPYPYFKTLISLAVGSLYCLLS-WS--SGLPKR---------LKISSALLKLLLPVAIVHTIGHVTSNV 84 (302)
T ss_pred HHHHHHHHhh-CChhHHHHHHHHHHHHHHHHHH-HH--hCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455655543 566777777776 344443322 11 111111 112356777788889988888899999
Q ss_pred hhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHHH
Q 016214 137 GYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGGS 216 (393)
Q Consensus 137 sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~aa 216 (393)
|++|+++++++++.+++|+|+++++++++|||++++++.|+++.++|+++.. ..+ . +.+..|++++++|+
T Consensus 85 ~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~~~--~-------~~~~~G~~~~l~a~ 154 (302)
T TIGR00817 85 SLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS-DTE--L-------SFNWAGFLSAMISN 154 (302)
T ss_pred HHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc-CCc--c-------cccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998743 211 1 12567999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhcc--ch-hHHHHHHHHHHHH
Q 016214 217 AGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFK--LG-KVSYLMTLIWTAI 293 (393)
Q Consensus 217 ~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~--~~-~~~~~~~l~~~ai 293 (393)
++|++|.++.++..++ ++ .+++++..|....+.+.+++.....++.+..+.+...+. .. ...+...+.....
T Consensus 155 ~~~a~~~v~~k~~~~~--~~---~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
T TIGR00817 155 ITFVSRNIFSKKAMTI--KS---LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMG 229 (302)
T ss_pred HHHHHHHHHHHHhhcc--CC---CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHH
Confidence 9999998887765442 01 256788889998888777775554332222221111110 00 0111111122111
Q ss_pred HHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhc
Q 016214 294 GWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 294 ~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
+...++.........+++.+.++...+++++++++|++++||++++.+++|+++++.|++.|.+.|
T Consensus 230 ~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 230 FFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 222233222224668899999999999988999999999999999999999999999999988754
No 4
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.93 E-value=1.9e-23 Score=206.94 Aligned_cols=282 Identities=15% Similarity=0.130 Sum_probs=189.7
Q ss_pred HHHHHHHHHhhhcCCccceeeh-hhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 016214 55 SVATLLGRLYYAEGGKSKWMAG-LVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLM 133 (393)
Q Consensus 55 s~~~ll~r~~~~~g~~~~~~~t-~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l 133 (393)
....+..|...++ .+.|+..+ ++...++.++.+......++.++. +..++.+...++.|++.......
T Consensus 62 ~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~llp~gl~~~~~~~~ 130 (350)
T PTZ00343 62 VLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPRI----------KSLKLFLKNFLPQGLCHLFVHFG 130 (350)
T ss_pred HHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCC----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555766655 45344444 444467665443322211111111 11234556666777775444555
Q ss_pred HHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHH
Q 016214 134 YSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTV 213 (393)
Q Consensus 134 ~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L 213 (393)
.+.|++++++|++++++++.|+|+++++++++|||++++++.+++++++|+++...++. +.+..|+++++
T Consensus 131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~----------~~~~~G~~~~l 200 (350)
T PTZ00343 131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL----------HFTWLAFWCAM 200 (350)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc----------hhHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999998542211 12678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhh----hhccc-hhHHHHHHH
Q 016214 214 GGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEM----EEFKL-GKVSYLMTL 288 (393)
Q Consensus 214 ~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~----~~~~~-~~~~~~~~l 288 (393)
+|++++|+|.++.|+..++........+..++..|..+++.+++++.....+ ........ ..+.. ........+
T Consensus 201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~l~~i 279 (350)
T PTZ00343 201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE-GKKWVPVWTNYTANMTNYTKGIIIFKI 279 (350)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHhhhcccccchHHHHHHH
Confidence 9999999999999887765210000123445555667777777766544322 11111100 01111 001111234
Q ss_pred HHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 289 IWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 289 ~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
+.+++.+..++.........+++++.++.+++++++++++|+++|||++++.+++|+++++.|+++|.+.
T Consensus 280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 4455556666654444567899999999999999999999999999999999999999999999999875
No 5
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.91 E-value=9.2e-23 Score=195.30 Aligned_cols=314 Identities=14% Similarity=0.180 Sum_probs=223.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-ccceeehhhhhcchhHHHHHHHh-------ccccCCC------
Q 016214 34 QQNWKWWIRICFYILFLLGGQSVATLLGRLYYAEGG-KSKWMAGLVQPAGFPILLPLYLI-------SAPENIP------ 99 (393)
Q Consensus 34 ~~~~~~w~~~~~~~~~~~~~~s~~~ll~r~~~~~g~-~~~~~~t~~~~~~~p~ll~~~~~-------~~~~~~~------ 99 (393)
.++|| |.++.+.++++.+.+..+.-+.|..++++. ++|++.||..+..|.++++++.+ ..+|.++
T Consensus 7 ~~~~r-~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~ 85 (416)
T KOG2765|consen 7 TKRWR-WTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIM 85 (416)
T ss_pred hhhhH-HHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhh
Confidence 34455 999999999999999999999999998864 78999999999999999987542 1111000
Q ss_pred C--C--------------------------------C--CC-----CCC--C------C------CCc-hHHHHHHHHHH
Q 016214 100 T--S--------------------------------Y--NS-----NLH--E------R------PPS-FLTIISVYVSL 123 (393)
Q Consensus 100 ~--~--------------------------------~--~~-----~~~--~------~------~~~-~~~~~~~~~~~ 123 (393)
. | . ++ +.+ + + +.. .++..+..+.+
T Consensus 86 ~e~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~f 165 (416)
T KOG2765|consen 86 EEADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFF 165 (416)
T ss_pred hhhhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHH
Confidence 0 0 0 00 000 0 0 001 23578888889
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCc
Q 016214 124 GILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKG 203 (393)
Q Consensus 124 G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~ 203 (393)
+.++...|+.+|.||.|++++..+++.+++-+||..++.+|..||+|+.|.+++.+.+.|++++..++..+. ++....
T Consensus 166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~--~~~~a~ 243 (416)
T KOG2765|consen 166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN--SDLPAS 243 (416)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc--ccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999998765544221 111234
Q ss_pred chHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchh-
Q 016214 204 KYAIGFICTVGGSAGYGLILSLTQLFFERVFKKE-TFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGK- 281 (393)
Q Consensus 204 ~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~-~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~- 281 (393)
+..+|+++++++|+.||.|.++.++-. .++ ...+.-.+..|.+++..+++.+++++-+.+. .+.|....
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~----~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~-----~e~F~lP~~ 314 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKI----GDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG-----EERFELPSS 314 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhc----ccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc-----cCcccCCCC
Confidence 579999999999999999998876433 223 1122223344555555555554443321110 12222111
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 282 ----VSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 282 ----~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
......++++.++=..|..++ ..++++..++..++.+|++.+.++++-|.++++..++|...|++|++..++
T Consensus 315 ~q~~~vv~~~ligtvvSDylW~~a~----~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 315 TQFSLVVFNNLIGTVVSDYLWAKAV----LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred ceeEeeeHhhHHHHHHHHHHHHHHH----HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence 112223455555523333332 368889999999999999999999999999999999999999999999998
Q ss_pred hccccc
Q 016214 358 HHYLDD 363 (393)
Q Consensus 358 ~~~~~~ 363 (393)
....+.
T Consensus 391 ~~~~~~ 396 (416)
T KOG2765|consen 391 SSENSK 396 (416)
T ss_pred cccccc
Confidence 765443
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.90 E-value=1.1e-21 Score=190.69 Aligned_cols=296 Identities=19% Similarity=0.194 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCc--cceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHH
Q 016214 45 FYILFLLGGQSVATLLGRLYYAEGGK--SKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVS 122 (393)
Q Consensus 45 ~~~~~~~~~~s~~~ll~r~~~~~g~~--~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (393)
++...+..+.+...++......+.+. .+++.+..|.+...+...+......+ ++. +. .-+..++.
T Consensus 3 ~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-~~~-------~~-----~~~~~~~~ 69 (303)
T PF08449_consen 3 ICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-PKS-------RK-----IPLKKYAI 69 (303)
T ss_pred eeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-cCC-------Cc-----ChHHHHHH
Confidence 34556667777777777665555444 48888888886666544443321110 111 01 11233444
Q ss_pred HHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCC
Q 016214 123 LGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASK 202 (393)
Q Consensus 123 ~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~ 202 (393)
.+++....+.+.|.|++|+|.+++++++++.|+++++++++++|||++++++.++++.++|+++....+..+++.++...
T Consensus 70 ~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~ 149 (303)
T PF08449_consen 70 LSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSS 149 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccccccc
Confidence 47777788889999999999999999999999999999999999999999999999999999987666541111111111
Q ss_pred cchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHh--cCcchhhhhhhhhccch
Q 016214 203 GKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFA--SGEWEGLSGEMEEFKLG 280 (393)
Q Consensus 203 ~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~--~~~~~~l~~~~~~~~~~ 280 (393)
.....|+++.+++.++.|+....+|+.++++ ..++.++.+|.++++.+..++.... .+|+..- ..+...
T Consensus 150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~-----~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~----~~f~~~ 220 (303)
T PF08449_consen 150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKY-----GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA----IRFISA 220 (303)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH----HHHHHH
Confidence 2234599999999999999999999888774 1356899999999998887776655 5543311 111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcc
Q 016214 281 KVSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHY 360 (393)
Q Consensus 281 ~~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~ 360 (393)
....+..+....++...........+...++++.+++.+++.++++++++++||+++++.+|+|.++++.|...|.+.++
T Consensus 221 ~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 221 HPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 11111112222222111122223346778999999999999999999999999999999999999999999999999876
Q ss_pred cc
Q 016214 361 LD 362 (393)
Q Consensus 361 ~~ 362 (393)
|+
T Consensus 301 k~ 302 (303)
T PF08449_consen 301 KK 302 (303)
T ss_pred cC
Confidence 53
No 7
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.2e-20 Score=181.15 Aligned_cols=310 Identities=14% Similarity=0.129 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccC----CCCCCCCCCCC-CCCchHHHHHH
Q 016214 45 FYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPEN----IPTSYNSNLHE-RPPSFLTIISV 119 (393)
Q Consensus 45 ~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~ 119 (393)
++++.+.+-.++.+++.|+..+.++.++.-.|.+...+...+.++.++..++. ++..+.. ++ .....++..+.
T Consensus 18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l--~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSL--SKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhc--CHHHHhChHHHHHH
Confidence 34445556667788888999998877777778877788888887765433221 1110011 10 01123467888
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCC-
Q 016214 120 YVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESS- 198 (393)
Q Consensus 120 ~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~- 198 (393)
.+|..++ +.+|.+++.++.++|++++++..++....|++|++++++||+++++|.++++++.|++++..+..+..++.
T Consensus 96 ~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~ 174 (345)
T KOG2234|consen 96 SVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS 174 (345)
T ss_pred HHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 8886655 55566999999999999999999999999999999999999999999999999999999764333111111
Q ss_pred ccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhcc
Q 016214 199 DASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFK 278 (393)
Q Consensus 199 ~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~ 278 (393)
..+..+.+.|....+.+|.+.|+.-++ ++|++|+.+ ...+-....+++++.++.+.++...+ ++... ...+-
T Consensus 175 ~~~~~n~~~G~~avl~~c~~SgfAgvY----fEkiLK~s~-~s~wi~NiqL~~~g~~f~~l~~~~~d-~~~i~--~~gff 246 (345)
T KOG2234|consen 175 ESSAQNPFLGLVAVLVACFLSGFAGVY----FEKILKGSN-VSLWIRNIQLYFFGILFNLLTILLQD-GEAIN--EYGFF 246 (345)
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHHH----HHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhhcc-ccccc--cCCcc
Confidence 234567899999999999999887554 555555543 23444455566777777777665543 44433 22332
Q ss_pred chhHHHHHHHHHHHHHHHHH-HHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 279 LGKVSYLMTLIWTAIGWQVF-SIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 279 ~~~~~~~~~l~~~ai~~~~~-~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
.| +-..+|..+..++. ++.+.-++++.++...+...++.+.++.+.++.+|+-++|..-.+|..+++..+..|..
T Consensus 247 ~G----~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~ 322 (345)
T KOG2234|consen 247 YG----YSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL 322 (345)
T ss_pred cc----ccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence 22 22233333333332 12223357899999999999999999999999999999999999999999999999987
Q ss_pred hcccccccccccC
Q 016214 358 HHYLDDFKSKTKD 370 (393)
Q Consensus 358 ~~~~~~~~~~~~~ 370 (393)
.+++| ++++..+
T Consensus 323 ~P~~~-~~~~~~~ 334 (345)
T KOG2234|consen 323 YPARD-AQKNYNP 334 (345)
T ss_pred CCccc-ccccCCC
Confidence 77776 4444443
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.88 E-value=3.8e-20 Score=179.03 Aligned_cols=277 Identities=15% Similarity=0.078 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVS 122 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (393)
.....+.+.+.++.+.+..|...+ +-++.++.++|...+..++++..... + ++. + .++.+.....
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~--~-~~~----------~-~~~~~~~~~~ 73 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLR--G-HPL----------P-TLRQWLNAAL 73 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHh--C-CCC----------C-cHHHHHHHHH
Confidence 344466677777889999998877 67889999999998888877655431 1 111 0 1234444555
Q ss_pred HHHHH-HHHHHHHHhhh-cccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 016214 123 LGILQ-AAISLMYSFGY-LYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDA 200 (393)
Q Consensus 123 ~G~l~-~~~~~l~~~sl-~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~ 200 (393)
.|.+. +..+.+++.+. +++|++.++++.+++|+|+++++++ +|||++++++.|+++.++|+.++..++. .
T Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~--~----- 145 (292)
T PRK11272 74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN--L----- 145 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc--c-----
Confidence 56654 45567788898 9999999999999999999999986 6999999999999999999987642211 1
Q ss_pred CCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccch
Q 016214 201 SKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLG 280 (393)
Q Consensus 201 s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~ 280 (393)
+....|++++++|+++||+|.+..++.. ++ +......|...++...+.+.....++......+.+.|
T Consensus 146 --~~~~~G~l~~l~a~~~~a~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 212 (292)
T PRK11272 146 --SGNPWGAILILIASASWAFGSVWSSRLP----LP----VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGF--- 212 (292)
T ss_pred --ccchHHHHHHHHHHHHHHHHHHHHHhcC----CC----cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHH---
Confidence 1245799999999999999987765422 11 1223445555555544444332322111000011111
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhc
Q 016214 281 KVSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 281 ~~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
....+..++.+++.+..+..+. .+.++...+++..++|+.+.+++++++||+++..+++|+++++.|++.....+
T Consensus 213 ~~i~~l~i~~s~~~~~l~~~~~----~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 213 LALGYLAVFGSIIAISAYMYLL----RNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----hhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 1122344445555555544333 35666777888889999999999999999999999999999999998876543
No 9
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.86 E-value=3e-19 Score=173.34 Aligned_cols=277 Identities=13% Similarity=0.178 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 016214 46 YILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGI 125 (393)
Q Consensus 46 ~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 125 (393)
..++..+.+..+.+..|...+ +.++.++.++|...+...+++.. .+ +|. + ++. ....|+
T Consensus 8 ~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~---~~--~~~----------~--~~~---~~~~g~ 66 (299)
T PRK11453 8 LALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV---AR--PKV----------P--LNL---LLGYGL 66 (299)
T ss_pred HHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh---cC--CCC----------c--hHH---HHHHHH
Confidence 345566777788889998775 47889999999887655443322 11 111 1 121 122244
Q ss_pred HH-HHHHHHHHhhhcc-cchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCc
Q 016214 126 LQ-AAISLMYSFGYLY-LPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKG 203 (393)
Q Consensus 126 l~-~~~~~l~~~sl~y-lsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~ 203 (393)
+. ..+..+++.+++| +|++.++++.+++|+++.+++++++|||+++++++++++.++|+.++..++. ++ ..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~--~~-----~~ 139 (299)
T PRK11453 67 TISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL--NG-----QH 139 (299)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC--CC-----cc
Confidence 32 3444567789988 6999999999999999999999999999999999999999999997642211 11 01
Q ss_pred chHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHH-HHhcCcchhhhhhhhhccchhH
Q 016214 204 KYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVG-LFASGEWEGLSGEMEEFKLGKV 282 (393)
Q Consensus 204 ~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~-~~~~~~~~~l~~~~~~~~~~~~ 282 (393)
.+..|++++++|+++|+.|.++.++..++ ........+..+.+..+.+..... ...+++ .........+....+
T Consensus 140 ~~~~G~~l~l~aal~~a~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 214 (299)
T PRK11453 140 VAMLGFMLTLAAAFSWACGNIFNKKIMSH----STRPAVMSLVVWSALIPIIPFFVASLILDGS-ATMIHSLVTIDMTTI 214 (299)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCccchhHHHHHHHHHHHHHHHHHHHHhcCc-hhhhhhhccCCHHHH
Confidence 24579999999999999999888765443 111233445556665554433322 222221 111000011111111
Q ss_pred --HHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhc
Q 016214 283 --SYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 283 --~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
..++.++.+++.+..+..+. ...++...+.+..++|+++.+++++++||++++.+++|+++++.|+.+..+++
T Consensus 215 ~~l~~l~i~~t~~~~~l~~~~l----~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 215 LSLMYLAFVATIVGYGIWGTLL----GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 12334445555554444332 23444566677788888899999999999999999999999999998877655
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.86 E-value=2.1e-19 Score=170.14 Aligned_cols=255 Identities=15% Similarity=0.156 Sum_probs=175.5
Q ss_pred HHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 016214 56 VATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMYS 135 (393)
Q Consensus 56 ~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~~ 135 (393)
.+.+..|...+++.+.......|..++.+++++.... + +. .++........++..+.++.+++
T Consensus 3 ~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~-~----~~------------~~~~~~~~~~~~~~~~l~~~~~~ 65 (260)
T TIGR00950 3 TTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR-R----PP------------LKRLLRLLLLGALQIGVFYVLYF 65 (260)
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh-c----cC------------HhHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888777777777777776777766554332 1 11 01222222332333477888999
Q ss_pred hhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHH
Q 016214 136 FGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGG 215 (393)
Q Consensus 136 ~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~a 215 (393)
.|++|+|++.++++.+++|+++++++++++|||++++++.++++.++|+.++..++. . +.+..|+++++.|
T Consensus 66 ~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--~-------~~~~~G~~~~l~a 136 (260)
T TIGR00950 66 VAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--L-------SINPAGLLLGLGS 136 (260)
T ss_pred HHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--c-------cccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998642211 1 1257899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhH--HHHHHHHHHHH
Q 016214 216 SAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKV--SYLMTLIWTAI 293 (393)
Q Consensus 216 a~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~l~~~ai 293 (393)
+++|+.+.++.++..++ .. .+...+..+.+.++.+.+++.....++... .....+ ..+..++.+.+
T Consensus 137 ~~~~a~~~~~~k~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 137 GISFALGTVLYKRLVKK----EG-PELLQFTGWVLLLGALLLLPFAWFLGPNPQ-------ALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred HHHHHHHHHHHhHHhhc----CC-chHHHHHHHHHHHHHHHHHHHHHhcCCCCC-------cchHHHHHHHHHHHHHHHH
Confidence 99999998887665543 11 123334435566666665554444332111 111111 11223333344
Q ss_pred HHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHH
Q 016214 294 GWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGF 352 (393)
Q Consensus 294 ~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~ 352 (393)
.+..+..+ ....++...+++..++|+++.+++++++||+++..+++|.++++.|+
T Consensus 205 ~~~~~~~a----~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 205 AYFLWNKG----LTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHH----HhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 44333332 34677777888888999999999999999999999999999999986
No 11
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.84 E-value=5.7e-20 Score=169.84 Aligned_cols=302 Identities=14% Similarity=0.164 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHHHHhhhc------CCccceeehhhhhcchhHHHHHHHhccccCCCCC----CCCCC-CCCCCchHHH
Q 016214 48 LFLLGGQSVATLLGRLYYAE------GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTS----YNSNL-HERPPSFLTI 116 (393)
Q Consensus 48 ~~~~~~~s~~~ll~r~~~~~------g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~ 116 (393)
+++++.++..+++.|.+.+. |.+++++++..++.|.-.++..+++.++|..... ..++. +..+|..++.
T Consensus 9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l 88 (372)
T KOG3912|consen 9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL 88 (372)
T ss_pred hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce
Confidence 45666779999999987653 4689999999999887666555544444322211 01111 2233444556
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 016214 117 ISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTE 196 (393)
Q Consensus 117 ~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~ 196 (393)
+.....+.+ +++.++ |.|+.++++|.+||++..-.+||.+|+.-+++++++.++|+|+....+|.++++..|-...+
T Consensus 89 fl~Pal~Di--~gsslm-~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 89 FLPPALCDI--AGSSLM-YVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred ecChHHHHH--hhhHHH-HHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 666666676 455544 59999999999999999999999999999999999999999999999999987765431111
Q ss_pred CCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHH-HHH----hcCc-chhh
Q 016214 197 SSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILV-GLF----ASGE-WEGL 270 (393)
Q Consensus 197 ~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~-~~~----~~~~-~~~l 270 (393)
.+....+.-+.|+++.+.|.+.-|.++++.|+..+|. ..++++...|.++++.+.+.. +.. ..++ +..-
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-----nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~ 240 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-----NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCN 240 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-----cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCC
Confidence 1111223468999999999999999999998877763 357889999999998554322 221 1221 1100
Q ss_pred hh-hhhhcc------chhHHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHH
Q 016214 271 SG-EMEEFK------LGKVSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVI 343 (393)
Q Consensus 271 ~~-~~~~~~------~~~~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~ii 343 (393)
++ ..+.|. .......+++.++.++...+|+....+.++.|+.+..++..++.-+.++++....+|.+...|+.
T Consensus 241 ~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqil 320 (372)
T KOG3912|consen 241 PRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQIL 320 (372)
T ss_pred CCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHH
Confidence 00 011111 12234456667777776667776667788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 016214 344 AMVLAIWGFLSYFY 357 (393)
Q Consensus 344 G~~lil~G~~~~~~ 357 (393)
|+++.+.|.++|+=
T Consensus 321 GFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 321 GFLILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999973
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.84 E-value=3.7e-19 Score=172.45 Aligned_cols=282 Identities=11% Similarity=0.025 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVS 122 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (393)
..+..++..+..+...+..|.. .+.++..+.++|..++.+++++.....+++.+.. +....++.......
T Consensus 9 g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 78 (296)
T PRK15430 9 GVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLK--------TLIQTPQKIFMLAV 78 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH--------HHHcCHHHHHHHHH
Confidence 4445555556667778888875 3466788899999999887766554321110000 00001233233333
Q ss_pred HHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCC
Q 016214 123 LGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASK 202 (393)
Q Consensus 123 ~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~ 202 (393)
.++..+.++.++++|++++|++.++++.++.|+|+++++++++|||++++++.++++.++|++++. .++ ++
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~-~~~-~~------- 149 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL-WTF-GS------- 149 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH-HHc-CC-------
Confidence 344457788999999999999999999999999999999999999999999999999999999864 222 11
Q ss_pred cchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhH
Q 016214 203 GKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKV 282 (393)
Q Consensus 203 ~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~ 282 (393)
. .+++++|+++||+|.++.++.. ++. .........|..+++.+.... ........... ..+.. ..
T Consensus 150 --~---~~~~l~aa~~~a~~~i~~r~~~----~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~-~~ 214 (296)
T PRK15430 150 --L---PIIALGLAFSFAFYGLVRKKIA----VEA-QTGMLIETMWLLPVAAIYLFA--IADSSTSHMGQ--NPMSL-NL 214 (296)
T ss_pred --c---cHHHHHHHHHHHHHHHHHHhcC----CCC-chhHHHHHHHHHHHHHHHHHH--HccCCcccccC--CcHHH-HH
Confidence 1 1467889999999987755432 111 112233334444444332111 11111000000 01100 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcccc
Q 016214 283 SYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLD 362 (393)
Q Consensus 283 ~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~ 362 (393)
..+...+.+++.+..++.+ ....++...+....++|+++.++|++++||++++.+++|+++++.|+.+.....-.-
T Consensus 215 ~~~~~g~~t~i~~~~~~~a----~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~ 290 (296)
T PRK15430 215 LLIAAGIVTTVPLLCFTAA----ATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT 290 (296)
T ss_pred HHHHHHHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111112333333333332 346777778888889999999999999999999999999999999998887655443
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.84 E-value=2.7e-18 Score=166.16 Aligned_cols=274 Identities=11% Similarity=0.053 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 016214 45 FYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLG 124 (393)
Q Consensus 45 ~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 124 (393)
...++-.++.+.+..+.|+..++ .+...+..+|...+.+++++.... .+ .+. .+|........|
T Consensus 15 ~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~-~~~------------~~~~~~~~~~~g 78 (293)
T PRK10532 15 LLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR-LRF------------AKEQRLPLLFYG 78 (293)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh-ccC------------CHHHHHHHHHHH
Confidence 33444445555666789988876 677889999999998887654321 11 010 123333344456
Q ss_pred HHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcc
Q 016214 125 ILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGK 204 (393)
Q Consensus 125 ~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~ 204 (393)
++.+..+.++++|++|+|++.++++..++|+++++++. |+..+. .++.+.++|+.++. ..+ .+. ...
T Consensus 79 ~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~-~~~-~~~-----~~~ 145 (293)
T PRK10532 79 VSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLL-PLG-QDV-----SHV 145 (293)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheee-ecC-CCc-----ccC
Confidence 66677788899999999999999999999999998873 565544 45667788888653 222 111 012
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHH
Q 016214 205 YAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSY 284 (393)
Q Consensus 205 ~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 284 (393)
+..|++++++|+++||.|.++.++..++ . ++..+ .+..+++.+++.+.....+. ....+...+ ....
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~----~---~~~~~-~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~---~~~l 212 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAE----H---GPATV-AIGSLIAALIFVPIGALQAG--EALWHWSIL---PLGL 212 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcc----C---CchHH-HHHHHHHHHHHHHHHHHccC--cccCCHHHH---HHHH
Confidence 4679999999999999998887765433 2 22233 34455555554443333221 000000011 0112
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcccccc
Q 016214 285 LMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLDDF 364 (393)
Q Consensus 285 ~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~~~ 364 (393)
++.++.+++.+..++.+. ...++..+++...++|+++.++|++++||++++.+++|+++++.|.+.+.+.+.+|.|
T Consensus 213 ~lgv~~t~~~~~l~~~~~----~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~ 288 (293)
T PRK10532 213 AVAILSTALPYSLEMIAL----TRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK 288 (293)
T ss_pred HHHHHHHHHHHHHHHHHH----HhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 344555555555554433 4567777888899999999999999999999999999999999999999876544433
No 14
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.83 E-value=2.3e-20 Score=180.02 Aligned_cols=296 Identities=17% Similarity=0.183 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhhhc-CCccceeehhhhhc-chhHHHHHHHhccccCCCCCCCCCCCCCCCchHHH
Q 016214 40 WIRICFYILFLLGGQSVATLLG-RLYYAE-GGKSKWMAGLVQPA-GFPILLPLYLISAPENIPTSYNSNLHERPPSFLTI 116 (393)
Q Consensus 40 w~~~~~~~~~~~~~~s~~~ll~-r~~~~~-g~~~~~~~t~~~~~-~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (393)
+.+...-....+...+...++. |...+. |++-++..|..+.+ +....+....+...+.++. . .+..
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~--------~---~~~~ 82 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKI--------S---SKLP 82 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcc--------c---cccc
Confidence 3444444455555555555555 444443 77888888877553 3333222222211111111 0 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 016214 117 ISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTE 196 (393)
Q Consensus 117 ~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~ 196 (393)
+...+++|+..+...++-|.|+.|+|+|++++++++.|+|+.++++++.+|++++..+.+++....|+++-...+.
T Consensus 83 ~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---- 158 (316)
T KOG1441|consen 83 LRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---- 158 (316)
T ss_pred hHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc----
Confidence 4455556888888899999999999999999999999999999999999999999999999999999987432211
Q ss_pred CCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHh--cCcchhhhhhh
Q 016214 197 SSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFA--SGEWEGLSGEM 274 (393)
Q Consensus 197 ~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~--~~~~~~l~~~~ 274 (393)
+.++.|++.++.+.+.++++.++.+..+++ ++++ .+.++...|+++.+.+.++++... +++. ......
T Consensus 159 ------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~--~~~~-~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~~~~~ 228 (316)
T KOG1441|consen 159 ------SFNLFGFISAMISNLAFALRNILSKKLLTS--KGES-LNSMNLLYYTAPISLIFLLIPFLDYVEGNK-FVGFLT 228 (316)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccc-cCchHHHHHhhhHHHHHHhcchHhhhcccc-eeeeec
Confidence 248999999999999999999999888764 3343 578899999999988887743322 2211 100011
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Q 016214 275 EEFKLGKVSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLS 354 (393)
Q Consensus 275 ~~~~~~~~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~ 354 (393)
..|+.+ ++. ++...+....+++...-++..+|+++-++.+.++..++++.++++|+|++++.++.|+++.+.|+..
T Consensus 229 ~~~~~~---~~~-~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 229 APWFVT---FLI-LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL 304 (316)
T ss_pred cccchh---hHH-HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence 122222 222 2222255556677777778899999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccc
Q 016214 355 YFYHHYLDDF 364 (393)
Q Consensus 355 ~~~~~~~~~~ 364 (393)
|.+.|.++.+
T Consensus 305 Y~~~k~~~~~ 314 (316)
T KOG1441|consen 305 YSRAKLKEKK 314 (316)
T ss_pred HHHHhhhhhc
Confidence 9987765443
No 15
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.81 E-value=7.2e-18 Score=163.37 Aligned_cols=273 Identities=12% Similarity=0.085 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 016214 46 YILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGI 125 (393)
Q Consensus 46 ~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 125 (393)
+.++..+.+..+-+..|...+ +.++.++..+|...+.+++++.. ++++.+. ..++.... .++
T Consensus 8 ~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~-----------~~~~~~~~---~~l 69 (295)
T PRK11689 8 IGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ-----------FPKRYLLA---GGL 69 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc---ccccccc-----------ccHHHHHH---HhH
Confidence 355566667777888897554 47888999999888887766432 1111111 11222222 233
Q ss_pred HHHHHHHHHHhhhcc----cchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCc--
Q 016214 126 LQAAISLMYSFGYLY----LPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSD-- 199 (393)
Q Consensus 126 l~~~~~~l~~~sl~y----lsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~-- 199 (393)
..+.+..+++.|+.| ++++.++++.+++|+|+++++++++|||++++++.++++.++|++++..++. +.+..+
T Consensus 70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~-~~~~~~~~ 148 (295)
T PRK11689 70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN-GLSLAELI 148 (295)
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc-cchhhhhh
Confidence 345666677777654 6888899999999999999999999999999999999999999998643221 110000
Q ss_pred cCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccc
Q 016214 200 ASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKL 279 (393)
Q Consensus 200 ~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~ 279 (393)
.+......|++++++|+++||+|.++.++..++ . ++.... . ..+.+.+.+.....++. .. .+..
T Consensus 149 ~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~----~---~~~~~~--~-~~~~~~l~~~~~~~~~~-~~-----~~~~ 212 (295)
T PRK11689 149 NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG----K---NGITLF--F-ILTALALWIKYFLSPQP-AM-----VFSL 212 (295)
T ss_pred hccccChHHHHHHHHHHHHHHHHHHHHhhccCC----C---CchhHH--H-HHHHHHHHHHHHHhcCc-cc-----cCCH
Confidence 001124579999999999999999888765332 2 233322 1 22222222222223221 11 1111
Q ss_pred hhHHHHHHH--HHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 280 GKVSYLMTL--IWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 280 ~~~~~~~~l--~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
..+ ..+.. +.+++++..++.. ....++...+....++|+++.+++++++||+++..+++|+++++.|+.....
T Consensus 213 ~~~-~~l~~~~~~t~~~~~l~~~a----l~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 213 PAI-IKLLLAAAAMGFGYAAWNVG----ILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHH----HHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 111 11111 2233333334333 3456777788888999999999999999999999999999999999888765
Q ss_pred h
Q 016214 358 H 358 (393)
Q Consensus 358 ~ 358 (393)
.
T Consensus 288 ~ 288 (295)
T PRK11689 288 A 288 (295)
T ss_pred h
Confidence 3
No 16
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.80 E-value=4.8e-18 Score=159.15 Aligned_cols=232 Identities=18% Similarity=0.203 Sum_probs=174.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccC
Q 016214 112 SFLTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNN 191 (393)
Q Consensus 112 ~~~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~ 191 (393)
.+++-+....++|+..+.|..+.|+|+.|+|+|.|||.+++.++|+.+|+.+|.-||++|.-...+.+...|+.+....+
T Consensus 79 sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 79 SWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred cHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 45666778888999999999999999999999999999999999999999999999999999999999999988754332
Q ss_pred CCCCCCCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHH-HHHhcCcchhh
Q 016214 192 DESTESSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILV-GLFASGEWEGL 270 (393)
Q Consensus 192 ~~~~~~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~-~~~~~~~~~~l 270 (393)
. +.++.|+.+.++|++..|+.+.+.|...++ ++...++|+.+..+.++...+.+++ .+.++|.....
T Consensus 159 T----------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~--~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~ 226 (349)
T KOG1443|consen 159 T----------QFNIEGFFLVLAASLLSGLRWAFTQMLLRN--QPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT 226 (349)
T ss_pred c----------ceeehhHHHHHHHHHhhhhhHHHHHHHHhc--CccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch
Confidence 2 257899999999999999999999999988 3323468888888888775555444 55666643222
Q ss_pred hhh-hhhccchhHHHHHHHHH-HHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHH
Q 016214 271 SGE-MEEFKLGKVSYLMTLIW-TAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLA 348 (393)
Q Consensus 271 ~~~-~~~~~~~~~~~~~~l~~-~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~li 348 (393)
..+ ...++.+........+. .+.........-.-+...++.++.++.+-.+...+.++|.++.+|+++..++.|..++
T Consensus 227 ~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~ 306 (349)
T KOG1443|consen 227 SSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAIC 306 (349)
T ss_pred hhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHH
Confidence 221 11222222111111111 1111111122223346678888899999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 016214 349 IWGFLSY 355 (393)
Q Consensus 349 l~G~~~~ 355 (393)
+.|+..|
T Consensus 307 ~agi~~~ 313 (349)
T KOG1443|consen 307 LAGILLH 313 (349)
T ss_pred HHHHHHh
Confidence 9999998
No 17
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.77 E-value=2.8e-17 Score=154.73 Aligned_cols=221 Identities=18% Similarity=0.223 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCC
Q 016214 114 LTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDE 193 (393)
Q Consensus 114 ~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~ 193 (393)
++.++..+| +++++..|.+.+.++++++++++++++++..++|++++++++|||+++++|.++++.++|++++..++..
T Consensus 15 ~~~~~~~vP-A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 15 KDTLKLAVP-ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 455666666 6666777888889999999999999999999999999999999999999999999999999987655431
Q ss_pred CCCC-C-cc-----CCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCc
Q 016214 194 STES-S-DA-----SKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGE 266 (393)
Q Consensus 194 ~~~~-~-~~-----s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~ 266 (393)
.++. + .. .......|.++.++++++.|+..++.|+.+|+ .. .+......+.++++.++.++.....+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~----~~-~s~~~~N~qL~~~gi~~~~~~~~~~~- 167 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKR----SN-VSLWIQNMQLYLFGILFNLLALLLSD- 167 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcc----cc-hhHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 1110 0 00 12346899999999999999998888877765 21 34455556666777666655544332
Q ss_pred chhhhhhhhhccchhHHHHHHHHHHHHHHHH-HHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHH
Q 016214 267 WEGLSGEMEEFKLGKVSYLMTLIWTAIGWQV-FSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAM 345 (393)
Q Consensus 267 ~~~l~~~~~~~~~~~~~~~~~l~~~ai~~~~-~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~ 345 (393)
+....+ +.+-.|. -...+..+..+. .++.+..+.++.+++.+++...+...++.++++++|+.+++....+|.
T Consensus 168 ~~~~~~--~g~f~G~----~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~ 241 (244)
T PF04142_consen 168 GSAISE--SGFFHGY----SWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGA 241 (244)
T ss_pred cccccc--CCchhhc----chHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhe
Confidence 332221 1222222 122222333332 234444468899999999999999999999999999999999999987
Q ss_pred HH
Q 016214 346 VL 347 (393)
Q Consensus 346 ~l 347 (393)
.+
T Consensus 242 ~~ 243 (244)
T PF04142_consen 242 AL 243 (244)
T ss_pred ec
Confidence 65
No 18
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.74 E-value=7.4e-16 Score=148.22 Aligned_cols=216 Identities=9% Similarity=0.072 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCC
Q 016214 118 SVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTES 197 (393)
Q Consensus 118 ~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~ 197 (393)
...+..|+.......+++.|+++.|++.++.+.+++|+++++++++++|||++++++.|+.+.+.|+.++...+. ..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~--~~- 140 (281)
T TIGR03340 64 LLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF--AQ- 140 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc--cc-
Confidence 344444555567788999999999999999999999999999999999999999999999999999997643221 11
Q ss_pred CccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHH-HHHHHHHHHhcCcchhhhhhhhh
Q 016214 198 SDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVS-TCIILVGLFASGEWEGLSGEMEE 276 (393)
Q Consensus 198 ~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a-~i~~l~~~~~~~~~~~l~~~~~~ 276 (393)
.+..|+.++++++++|++|.++.++..++. ++. ........+..... ...... ....++ ..... ..
T Consensus 141 ------~~~~g~~~~l~aal~~a~~~i~~k~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~--~~ 207 (281)
T TIGR03340 141 ------HRRKAYAWALAAALGTAIYSLSDKAAALGV-PAF--YSALGYLGIGFLAMGWPFLLL-YLKRHG-RSMFP--YA 207 (281)
T ss_pred ------cchhHHHHHHHHHHHHHHhhhhccccccch-hcc--cccHHHHHHHHHHHHHHHHHH-HHHHhc-cchhh--hH
Confidence 134688899999999999987655432221 000 01111111221111 111111 111111 10000 00
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Q 016214 277 FKLGKVSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLS 354 (393)
Q Consensus 277 ~~~~~~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~ 354 (393)
... ....+...+.+++.+..+..+.. ..++...+....++++++.+++++++||+++..+++|+++++.|+++
T Consensus 208 ~~~-~~~~~~~~~~s~l~~~l~~~al~----~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 208 RQI-LPSATLGGLMIGGAYALVLWAMT----RLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHh----hCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 000 01112333334444444433322 23333344455667778999999999999999999999999999875
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.68 E-value=6.2e-14 Score=133.57 Aligned_cols=210 Identities=16% Similarity=0.197 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHH-HHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCC
Q 016214 124 GILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSF-FLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASK 202 (393)
Q Consensus 124 G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~-i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~ 202 (393)
++..+....+|+.+++|++++.++++.+++|++++++++ ++++||++++++.++++.++|+.++...+. .+. .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~--~~~---~- 150 (292)
T COG0697 77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG--GGG---I- 150 (292)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC--cch---h-
Confidence 344467788999999999999999999999999999997 777999999999999999999998653332 110 0
Q ss_pred cchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHH-HhHHHHHHHHHHHHHhcCcchhhhhhhhhccchh
Q 016214 203 GKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMII-YPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGK 281 (393)
Q Consensus 203 ~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~-y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~ 281 (393)
. ...|+++++++++++|++.+..++.. + . +...... +... +............ .+ .+.. +....
T Consensus 151 ~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~----~---~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-~~~~---~~~~~ 215 (292)
T COG0697 151 L-SLLGLLLALAAALLWALYTALVKRLS-R----L---GPVTLALLLQLL-LALLLLLLFFLSG-FG-APIL---SRAWL 215 (292)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhc-C----C---ChHHHHHHHHHH-HHHHHHHHHHhcc-cc-ccCC---HHHHH
Confidence 1 47899999999999999887776544 2 1 1222222 2222 1111111111111 11 1111 11001
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 282 VSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 282 ~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
...+..++..++.+..+..+ ....+....+.+...+++.+.+++++++||+++..+++|+.+++.|+......
T Consensus 216 ~~~~~g~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 216 LLLYLGVFSTGLAYLLWYYA----LRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 11122233333333332222 22344444444445566667778999999999999999999999999998865
No 20
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.66 E-value=1.4e-14 Score=140.16 Aligned_cols=267 Identities=19% Similarity=0.118 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 016214 50 LLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAA 129 (393)
Q Consensus 50 ~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~ 129 (393)
-.+++-...+..|... |.+..|+. +...|..++.....+.+.+ +. ..++.+...+..|++++.
T Consensus 9 a~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~--~~-----------~~~~~~~~g~l~G~~w~i 71 (290)
T TIGR00776 9 PALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLP--EF-----------WALSIFLVGLLSGAFWAL 71 (290)
T ss_pred HHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCC--cc-----------cccHHHHHHHHHHHHHHh
Confidence 3344445556667655 55556654 4455555554444432211 11 124677788888999999
Q ss_pred HHHHHHhhhcccchHHHHHHHH-hhHHHHHHHHHHHccCCCChhH----HHHHHHHHHHHHHhhccCCCCCCCCccCCcc
Q 016214 130 ISLMYSFGYLYLPVSTYSLICA-TQLAFNALFSFFLNSLKFDPYI----INSLVLLTISSILLAFNNDESTESSDASKGK 204 (393)
Q Consensus 130 ~~~l~~~sl~ylsvs~asll~~-~~pift~l~s~i~~kek~t~~~----~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~ 204 (393)
.|.+|+.+.+|+.++.+..+.+ .+++++.+++.+++|||.++++ +.|+++.++|+++++..++ ++. ++++..+
T Consensus 72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~-~~~-~~~~~~~ 149 (290)
T TIGR00776 72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKD-KSA-GIKSEFN 149 (290)
T ss_pred hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccc-ccc-ccccccc
Confidence 9999999999999999999988 9999999999999999999999 9999999999998654432 111 1000022
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHH---HHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchh
Q 016214 205 YAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDM---IIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGK 281 (393)
Q Consensus 205 ~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~---~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~ 281 (393)
+..|.++++.|+++|++|....+.. + + ++++. +.+.-+++..+..... . .. + .+....
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~--~----~---~~~~~~~~~~~g~~~~~~~~~~~~-~-~~-~-------~~~~~~ 210 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAF--G----V---DGLSVLLPQAIGMVIGGIIFNLGH-I-LA-K-------PLKKYA 210 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc--C----C---CcceehhHHHHHHHHHHHHHHHHH-h-cc-c-------chHHHH
Confidence 4679999999999999998887643 1 1 34444 3322222332222211 0 00 1 111100
Q ss_pred H--HHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHH----HHHHHHHHHHHHH
Q 016214 282 V--SYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKV----IAMVLAIWGFLSY 355 (393)
Q Consensus 282 ~--~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~i----iG~~lil~G~~~~ 355 (393)
. .....+++ .+....+..+. .....+..+.+++..++.++.+.+++++||+.+..++ +|+++++.|..+.
T Consensus 211 ~~~~~~~Gi~~-~ia~~~y~~~~---~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 211 ILLNILPGLMW-GIGNFFYLFSA---QPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL 286 (290)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHc---ccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence 0 01111121 22222233322 3255666778888999888999999999999999999 9999999998876
Q ss_pred Hhh
Q 016214 356 FYH 358 (393)
Q Consensus 356 ~~~ 358 (393)
...
T Consensus 287 ~~~ 289 (290)
T TIGR00776 287 GIG 289 (290)
T ss_pred hcc
Confidence 544
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.64 E-value=2.7e-14 Score=135.41 Aligned_cols=165 Identities=8% Similarity=-0.070 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 016214 44 CFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSL 123 (393)
Q Consensus 44 ~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (393)
..+.++..+..+.+.++.|.. .+.++.++..+|..++.+++++.....++++... . +.+++..++........
T Consensus 4 ~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 4 IIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALI---E--RLKRIQKRPLILSLLLC 76 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHH---H--HHhCcccchHHHHHHHH
Confidence 345555666677888999973 3478889999999999888766554322111000 0 00001112334444555
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCc
Q 016214 124 GILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKG 203 (393)
Q Consensus 124 G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~ 203 (393)
|++.+.+..+|++|++|+|++.++++.++.|+|+++++++++|||++++++.++++.++|++++.. ++ ++
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~-~~--~~------- 146 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV-LK--GS------- 146 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-Hc--CC-------
Confidence 776788889999999999999999999999999999999999999999999999999999997642 22 11
Q ss_pred chHHhHHHHHHHHHHHHHHHHHHHHH
Q 016214 204 KYAIGFICTVGGSAGYGLILSLTQLF 229 (393)
Q Consensus 204 ~~~~G~ll~L~aa~~~al~~il~~~~ 229 (393)
.. +++++++++||+|.+..++.
T Consensus 147 ~~----~~~l~aa~~~a~~~i~~~~~ 168 (256)
T TIGR00688 147 LP----WEALVLAFSFTAYGLIRKAL 168 (256)
T ss_pred ch----HHHHHHHHHHHHHHHHHhhc
Confidence 01 35788999999998776543
No 22
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=3.6e-13 Score=128.01 Aligned_cols=288 Identities=13% Similarity=0.133 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHhhhc-CCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 016214 51 LGGQSVATLLGRLYYAE-GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAA 129 (393)
Q Consensus 51 ~~~~s~~~ll~r~~~~~-g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~ 129 (393)
.+..+..++.-|+.-.+ ++|.....-..|.....+.+...- + . +- .+.++..+++.+.-+|..+++.+
T Consensus 21 ~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk--~--~-~l------v~~~~l~~~~~kk~~P~~~lf~~ 89 (314)
T KOG1444|consen 21 CLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLK--R--L-GL------VNFRPLDLRTAKKWFPVSLLFVG 89 (314)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH--H--h-ce------eecCCcChHHHHHHccHHHHHHH
Confidence 34444555555766554 566665555566655554332221 1 1 10 11233445666666777777777
Q ss_pred HHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhH
Q 016214 130 ISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGF 209 (393)
Q Consensus 130 ~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ 209 (393)
....-..+++|++++.+++++...|+++++....|++.|+++.-+.++.+..+|....+..+. + .+..|.
T Consensus 90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~-s---------f~~~gY 159 (314)
T KOG1444|consen 90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL-S---------FNLRGY 159 (314)
T ss_pred HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc-e---------ecchhH
Confidence 777777899999999999999999999999999999999999999999999988886443332 1 356699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHHHHHHH
Q 016214 210 ICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSYLMTLI 289 (393)
Q Consensus 210 ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 289 (393)
..++..+++-+.+.+..++.. +..+ .+-+++.+|-++.+....++..++.||++++..+.+.|... ..+..+.
T Consensus 160 ~w~~~n~~~~a~~~v~~kk~v----d~~~-l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~--~~~~~~~ 232 (314)
T KOG1444|consen 160 SWALANCLTTAAFVVYVKKSV----DSAN-LNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDS--SVLVVML 232 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhh----cccc-ccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccch--hHHHHHH
Confidence 999999999998877765433 3332 35567889999999888877778888877443322223221 2233333
Q ss_pred HHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcccccccc
Q 016214 290 WTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLDDFKS 366 (393)
Q Consensus 290 ~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~~~~~ 366 (393)
...+..++.+....-.....|+++.++++..-.-.+.+..++++++++++.+.+|..+.+.|-+.|.|.++++++.+
T Consensus 233 lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 233 LSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred HHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 33333333332222234567788888888333334556667777788999999999999999999999876654433
No 23
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.57 E-value=1.8e-15 Score=139.79 Aligned_cols=227 Identities=18% Similarity=0.186 Sum_probs=174.9
Q ss_pred HHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHH
Q 016214 131 SLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFI 210 (393)
Q Consensus 131 ~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~l 210 (393)
...-|+.++|.++++|.+=++...+|+.+++++++|||-+..-..++.+.++|-.+ +++.. +.++...+.|.+
T Consensus 116 I~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l-GvdqE------~~~~~ls~~Gvi 188 (347)
T KOG1442|consen 116 ISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL-GVDQE------GSTGTLSWIGVI 188 (347)
T ss_pred hhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee-ccccc------cccCccchhhhH
Confidence 33456899999999999999999999999999999999999988888887777654 43322 112345789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHHHHHHHH
Q 016214 211 CTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSYLMTLIW 290 (393)
Q Consensus 211 l~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 290 (393)
++..|+++-|+..+..+ |+..+. -...+.++.|.+..+.+++++.+++.||++.+-.-. ..+...+|..+..
T Consensus 189 fGVlaSl~vAlnaiytk----k~l~~v-~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~---~l~a~~Fw~~mtL 260 (347)
T KOG1442|consen 189 FGVLASLAVALNAIYTK----KVLPPV-GDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFP---HLPAIKFWILMTL 260 (347)
T ss_pred HHHHHHHHHHHHHHhhh----eecccc-cCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcc---cchHHHHHHHHHH
Confidence 99999999988766554 443333 245678899999999999999999999876543211 1122344444444
Q ss_pred HHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcccccccccccC
Q 016214 291 TAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLDDFKSKTKD 370 (393)
Q Consensus 291 ~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~~~~~~~~~ 370 (393)
.++.....+....--++.+|+++.|+-++.+-....++|+..++|..+...|-|-.+++.|...|.+.|..|++|+.+++
T Consensus 261 sglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~ 340 (347)
T KOG1442|consen 261 SGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQR 340 (347)
T ss_pred HHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCC
Confidence 44444444433333488999999999999999999999999999999999999999999999999999998888877766
Q ss_pred CC
Q 016214 371 GT 372 (393)
Q Consensus 371 ~~ 372 (393)
..
T Consensus 341 s~ 342 (347)
T KOG1442|consen 341 SP 342 (347)
T ss_pred Cc
Confidence 43
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.52 E-value=5.5e-13 Score=121.04 Aligned_cols=225 Identities=16% Similarity=0.182 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCC
Q 016214 119 VYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESS 198 (393)
Q Consensus 119 ~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~ 198 (393)
.++.+.+-+-+.....|.+++|.|-.++.+=++..|+=++++++++.+++.+|++..++++..+|+++....+.. ..
T Consensus 87 ~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K---v~ 163 (337)
T KOG1580|consen 87 MYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK---VG 163 (337)
T ss_pred HHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc---cC
Confidence 445545554555667789999999999999999999999999999999999999999999999999987554331 11
Q ss_pred ccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhcc
Q 016214 199 DASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFK 278 (393)
Q Consensus 199 ~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~ 278 (393)
+..++....|-++.++|-..-++--..+++....+ + +.--.|++|+.+++++.+-.+++++||.-++-.-.++..
T Consensus 164 g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q----~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP 238 (337)
T KOG1580|consen 164 GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-Q----RTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHP 238 (337)
T ss_pred CCcccccchHHHHHHHHHHhcccchhHHHHHHHhh-c----cCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhcc
Confidence 22334467899999999888888777777655443 1 234468999999999999999999997543322222211
Q ss_pred chhHHHHHHHHH-HHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHH
Q 016214 279 LGKVSYLMTLIW-TAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYF 356 (393)
Q Consensus 279 ~~~~~~~~~l~~-~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~ 356 (393)
...+-+.+++ .....|.+.+-. +.+-++++.+++.+-+--++++.++++|+++++..||+|.++++.|...=.
T Consensus 239 --~~~~~l~l~ai~s~LGQ~fIF~t---v~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 239 --YVFWDLTLLAIASCLGQWFIFKT---VEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred --HHHHHHHHHHHHHHhhhHHHHHH---HHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 1122222222 122234333222 345677888888888889999999999999999999999999999876643
No 25
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.49 E-value=5.1e-13 Score=116.35 Aligned_cols=150 Identities=27% Similarity=0.294 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhcc--ch-hHHH
Q 016214 208 GFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFK--LG-KVSY 284 (393)
Q Consensus 208 G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~--~~-~~~~ 284 (393)
|+++++.|+++.|++.++.|+.+++..++....++++++.|.++.+.+.+++..++.++.+..+...+... .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999888774212223578999999999999988887766654442222111111 01 2244
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 285 LMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 285 ~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
+..++..++.+..++.....+++.+|+++.++++.++.++..++++++|||+++..+++|++++++|++.|.|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5556667777778888888889999999999999999999999999999999999999999999999999976
No 26
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.48 E-value=1.5e-13 Score=127.46 Aligned_cols=223 Identities=16% Similarity=0.200 Sum_probs=161.2
Q ss_pred HHHHHHHHHhhhcc-cchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCC------Cc
Q 016214 127 QAAISLMYSFGYLY-LPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTES------SD 199 (393)
Q Consensus 127 ~~~~~~l~~~sl~y-lsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~------~~ 199 (393)
+...|.+-|.++++ +|...-.+.++..++-+++.+++++++|.+.+|+.|+++.++|+++-.+.++++.+. .+
T Consensus 74 FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~ 153 (330)
T KOG1583|consen 74 FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSG 153 (330)
T ss_pred eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccC
Confidence 34568888999999 799999999999999999999999999999999999999999999643332211110 11
Q ss_pred ---cCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHH--HhcCcchhhhhhh
Q 016214 200 ---ASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGL--FASGEWEGLSGEM 274 (393)
Q Consensus 200 ---~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~--~~~~~~~~l~~~~ 274 (393)
.+..-+.+|+.+...|.+..|.--+.+|...||+.| ++-|..+|.-+.+...++... +.. +|+.... .
T Consensus 154 ~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK-----h~~EalFytH~LsLP~Flf~~~div~-~~~~~~~-s 226 (330)
T KOG1583|consen 154 SAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGK-----HWKEALFYTHFLSLPLFLFMGDDIVS-HWRLAFK-S 226 (330)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ChHHHHHHHHHhccchHHHhcchHHH-HHHHHhc-C
Confidence 111225789988888988888888888999999754 345788999887765554310 111 1221111 1
Q ss_pred hhcc---ch--hHHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHH
Q 016214 275 EEFK---LG--KVSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAI 349 (393)
Q Consensus 275 ~~~~---~~--~~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil 349 (393)
|.+. .| ....+.-++.+.++-..|.-++.-+...+++++.+++.+++--++.+++++.|.++++++.|+|..++.
T Consensus 227 e~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF 306 (330)
T KOG1583|consen 227 ESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVF 306 (330)
T ss_pred cceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHH
Confidence 1111 01 112334455555554445555555667889999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 016214 350 WGFLSYF 356 (393)
Q Consensus 350 ~G~~~~~ 356 (393)
.|-+.|.
T Consensus 307 ~Gt~~fa 313 (330)
T KOG1583|consen 307 FGTLLFA 313 (330)
T ss_pred HHHHHHH
Confidence 9999885
No 27
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.48 E-value=1.8e-12 Score=119.87 Aligned_cols=296 Identities=15% Similarity=0.140 Sum_probs=208.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCc-cceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCc
Q 016214 35 QNWKWWIRICFYILFLLGGQSVATLLGRLYYAE-GGK-SKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPS 112 (393)
Q Consensus 35 ~~~~~w~~~~~~~~~~~~~~s~~~ll~r~~~~~-g~~-~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (393)
.++.+|.-..+|...+.+++-....+-.+.|+- |++ --|..|++|+.-...+...... -.+.++. ..|
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~-~~~~k~r--------~iP- 105 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ-LIQTKRR--------VIP- 105 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE-eecccce--------ecc-
Confidence 567779999999999999999999999888875 555 3788999885333221111110 0111010 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCC
Q 016214 113 FLTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNND 192 (393)
Q Consensus 113 ~~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~ 192 (393)
+..++.+..+..++..+.+-|+.|++-.+..+.+.+..+=+++.+.++-++|..+....+..+..+|.++..+.|.
T Consensus 106 ----~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs 181 (367)
T KOG1582|consen 106 ----WRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS 181 (367)
T ss_pred ----hhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc
Confidence 2234444555556667888999999999999999999999999999999999999999999999999998766664
Q ss_pred CCCCCCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcch-hhh
Q 016214 193 ESTESSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWE-GLS 271 (393)
Q Consensus 193 ~~~~~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~-~l~ 271 (393)
..+| ..+.+|..+.-+|-++-|+.-=++|+.+++. + ....+|.+|...++.+..++++..+||.- ..+
T Consensus 182 -~~sP-----NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~--~---~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~ 250 (367)
T KOG1582|consen 182 -QTSP-----NFNLIGVMMISGALLADAVIGNVQEKAMKMN--P---ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWT 250 (367)
T ss_pred -ccCC-----CcceeeHHHHHHHHHHHHHhhHHHHHHHhhC--C---CCcceEEEeeecccHHHHHHHHHhcccchhhhH
Confidence 3322 3578999999999888888766667666652 1 23468889988889988888888888732 111
Q ss_pred hhh-hhccchhHHHHHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHH
Q 016214 272 GEM-EEFKLGKVSYLMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIW 350 (393)
Q Consensus 272 ~~~-~~~~~~~~~~~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~ 350 (393)
.-+ +.+ ...++..+...+ .+.. -..+..+++.-+++.+..+.+.+-.+++++++++|..++|....-|.+++..
T Consensus 251 fcaehp~---~tyGy~~~~s~~-gylG-~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~l 325 (367)
T KOG1582|consen 251 FCAEHPV---RTYGYAFLFSLA-GYLG-IVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVL 325 (367)
T ss_pred HHHhCcH---hHHHHHHHHHHH-hHhh-HHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHH
Confidence 100 011 112222222211 1111 1112223555666777778889999999999999999999999999999999
Q ss_pred HHHHHHhhcc
Q 016214 351 GFLSYFYHHY 360 (393)
Q Consensus 351 G~~~~~~~~~ 360 (393)
|+++-.|++.
T Consensus 326 gI~Ln~ysk~ 335 (367)
T KOG1582|consen 326 GIYLNMYSKR 335 (367)
T ss_pred HHHhhcccCC
Confidence 9999999873
No 28
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.37 E-value=2e-10 Score=108.08 Aligned_cols=269 Identities=13% Similarity=0.074 Sum_probs=163.9
Q ss_pred HHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 016214 56 VATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMYS 135 (393)
Q Consensus 56 ~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~~ 135 (393)
..++..|+.. .-+...+.+.|..-.+|+.+......+.. +.- ... ...+|.+......+++.+.+-+.|-
T Consensus 21 ~lp~y~kll~--~~~~~eIlahRviwS~~~~l~ll~~~r~~-~~~------~~~-~~~p~~~~~~~l~a~li~~nW~lfi 90 (293)
T COG2962 21 LLPLYFKLLE--PLPATEILAHRVIWSFPFMLALLFLLRQW-REL------KQL-LKQPKTLLMLALTALLIGLNWWLFI 90 (293)
T ss_pred HHHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHHHHHhhh-HHH------HHH-HhCcHHHHHHHHHHHHHHHHHHHhh
Confidence 3344444433 33456788889888888888776654221 110 000 0123566677777888888888999
Q ss_pred hhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHH
Q 016214 136 FGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGG 215 (393)
Q Consensus 136 ~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~a 215 (393)
++.+.=.+--+++=+..+|.++.+.+.+|+|||+++.|++++.++.+||....+..+ + .. +.++.=
T Consensus 91 WAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g-~---------lp----wval~l 156 (293)
T COG2962 91 WAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG-S---------LP----WVALAL 156 (293)
T ss_pred eecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-C---------Cc----HHHHHH
Confidence 999997777888889999999999999999999999999999999999997655544 1 12 344555
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHHHHHHH--HHHH
Q 016214 216 SAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSYLMTLI--WTAI 293 (393)
Q Consensus 216 a~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~--~~ai 293 (393)
|++|++|..+ ||..+- +..+-..-..+.-.+.++..++..++-..+-. . .......++... .+++
T Consensus 157 a~sf~~Ygl~-----RK~~~v----~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~---~-~~~~~~~LLv~aG~vTav 223 (293)
T COG2962 157 ALSFGLYGLL-----RKKLKV----DALTGLTLETLLLLPVALIYLLFLADSGQFLQ---Q-NANSLWLLLVLAGLVTAV 223 (293)
T ss_pred HHHHHHHHHH-----HHhcCC----chHHhHHHHHHHHhHHHHHHHHHHhcCchhhh---c-CCchHHHHHHHhhHHHHH
Confidence 6789988533 343221 22221111222222233332222222111000 0 011111112111 1222
Q ss_pred HHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhccccccc
Q 016214 294 GWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLDDFK 365 (393)
Q Consensus 294 ~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~~~~ 365 (393)
....+..+. +..+-.+-+++...+|.+.-+.|++++||+++..+.++++.|-.|+++|.+....+.+|
T Consensus 224 pL~lf~~aa----~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~ 291 (293)
T COG2962 224 PLLLFAAAA----KRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK 291 (293)
T ss_pred HHHHHHHHH----hcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222222 12222234566777777888999999999999999999999999999999876544433
No 29
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.32 E-value=2.5e-13 Score=125.36 Aligned_cols=209 Identities=11% Similarity=0.139 Sum_probs=129.1
Q ss_pred HHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCC-CCCCCc--cCC-cchH
Q 016214 131 SLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDE-STESSD--ASK-GKYA 206 (393)
Q Consensus 131 ~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~-~~~~~~--~s~-~~~~ 206 (393)
.++.|+|+.|.|.+-|+++..++|+||.+|+|+++||++|+...++.++.+.|++++.-.+.- +++.++ .+. ..+.
T Consensus 111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~ 190 (346)
T KOG4510|consen 111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI 190 (346)
T ss_pred HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence 445568999999999999999999999999999999999999999999999999986422210 011101 111 1245
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhh-hhccchhHHHH
Q 016214 207 IGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEM-EEFKLGKVSYL 285 (393)
Q Consensus 207 ~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 285 (393)
.|.+.++.+.++-|--.++.+...|++ +.....-|.++++++..++++..-++++ +|+.. +.|..
T Consensus 191 ~gt~aai~s~lf~asvyIilR~iGk~~-------h~~msvsyf~~i~lV~s~I~~~~ig~~~-lP~cgkdr~l~------ 256 (346)
T KOG4510|consen 191 PGTVAAISSVLFGASVYIILRYIGKNA-------HAIMSVSYFSLITLVVSLIGCASIGAVQ-LPHCGKDRWLF------ 256 (346)
T ss_pred CchHHHHHhHhhhhhHHHHHHHhhccc-------cEEEEehHHHHHHHHHHHHHHhhcccee-cCccccceEEE------
Confidence 566666666665554444545444442 1112234677788888888776666554 22321 12211
Q ss_pred HHHHHHHHHHHHHH-HhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 286 MTLIWTAIGWQVFS-IGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 286 ~~l~~~ai~~~~~~-~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
..+..++...|..- .+.. +-..++ .++....-...+.+..+++||+-.|++.|+|+++++...+....
T Consensus 257 ~~lGvfgfigQIllTm~lQ--iErAGp--vaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 257 VNLGVFGFIGQILLTMGLQ--IERAGP--VAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred EEehhhhhHHHHHHHHHhh--hhccCC--eehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 11222233334321 1110 111111 12222333456888899999999999999999999877666554
No 30
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.31 E-value=3.5e-10 Score=106.75 Aligned_cols=231 Identities=16% Similarity=0.126 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCC
Q 016214 118 SVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTES 197 (393)
Q Consensus 118 ~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~ 197 (393)
..+..+++.-....++-+.||+|++-.+.++-++...+-+++...++.++|++..+.....+...|+.+..+.+. ++.+
T Consensus 84 ~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~-s~s~ 162 (327)
T KOG1581|consen 84 YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPN-SDSS 162 (327)
T ss_pred hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecC-CCCc
Confidence 344555776677788999999999999999999999999999999999999999999999999999997655543 2222
Q ss_pred CccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhc
Q 016214 198 SDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEF 277 (393)
Q Consensus 198 ~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~ 277 (393)
++..+.+...|+.+..+.=++-|+-...+..++++ +. ...+.|++++.++.++.....++..|.+.. +-.|
T Consensus 163 ~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~----~k-~s~~~mM~~vNLf~~i~~~~~li~qg~~~~----av~F 233 (327)
T KOG1581|consen 163 SKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK----YK-VSSLHMMFGVNLFSAILNGTYLILQGHLLP----AVSF 233 (327)
T ss_pred cccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc----CC-ccHhHHHHHHHHHHHHHHHHhhhcCCCCch----HHHH
Confidence 22223457999999988888777765555555554 42 567899999999999888877666664321 0111
Q ss_pred c--chhHHHHHH-HHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Q 016214 278 K--LGKVSYLMT-LIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLS 354 (393)
Q Consensus 278 ~--~~~~~~~~~-l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~ 354 (393)
. +.....-+. ...++...|.+...+ +..-++++-..+.+.+..++++++.+.||.++++.|++|..+++.|+..
T Consensus 234 ~~~hp~~~~Di~l~s~~gavGQ~FI~~T---I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 234 IKEHPDVAFDILLYSTCGAVGQLFIFYT---IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHcChhHHHHHHHHHHhhhhhhheehhh---HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 1 111111122 222222344432222 1223456666677888899999999999999999999999999999888
Q ss_pred HHhhccc
Q 016214 355 YFYHHYL 361 (393)
Q Consensus 355 ~~~~~~~ 361 (393)
=.+-+.+
T Consensus 311 ~~~~k~~ 317 (327)
T KOG1581|consen 311 EILLKKK 317 (327)
T ss_pred HHHHHHh
Confidence 7776554
No 31
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.30 E-value=6.1e-10 Score=102.55 Aligned_cols=253 Identities=15% Similarity=0.127 Sum_probs=151.7
Q ss_pred HHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016214 59 LLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMYSFGY 138 (393)
Q Consensus 59 ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~~~sl 138 (393)
-+.|-.|..-|. .-+.++|..++..++++.+- +++ +|- .++........|...+..|.++|.++
T Consensus 29 s~Ak~LFP~vG~-~g~t~lRl~~aaLIll~l~R--Pwr-~r~------------~~~~~~~~~~yGvsLg~MNl~FY~si 92 (292)
T COG5006 29 SFAKSLFPLVGA-AGVTALRLAIAALILLALFR--PWR-RRL------------SKPQRLALLAYGVSLGGMNLLFYLSI 92 (292)
T ss_pred HHHHHHccccCh-hhHHHHHHHHHHHHHHHHhh--HHH-hcc------------ChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554332 23466777777766554332 222 121 12333444445777778899999999
Q ss_pred cccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHHHHH
Q 016214 139 LYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGGSAG 218 (393)
Q Consensus 139 ~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~aa~~ 218 (393)
+.+|.+++..+-++.|+.+++++ .+|..-..|++ +.+.|..++. .++++.+ ..+..|..++++++++
T Consensus 93 ~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vwva--LAvlGi~lL~-p~~~~~~------~lDp~Gv~~Al~AG~~ 159 (292)
T COG5006 93 ERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVWVA--LAVLGIWLLL-PLGQSVW------SLDPVGVALALGAGAC 159 (292)
T ss_pred HhccchhhhhhhhccHHHHHHHh----ccchhhHHHHH--HHHHHHHhhe-eccCCcC------cCCHHHHHHHHHHhHH
Confidence 99999999999999999888765 45555555555 4566666543 2220111 2478999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhH--HHHHHHHHHHHHHH
Q 016214 219 YGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKV--SYLMTLIWTAIGWQ 296 (393)
Q Consensus 219 ~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~l~~~ai~~~ 296 (393)
|+.|++..|+.-+.. +.. .-...-..++.++.++....... . +-|..... ...+.+..+++-
T Consensus 160 Wa~YIv~G~r~g~~~-~g~------~g~a~gm~vAaviv~Pig~~~ag-~------~l~~p~ll~laLgvavlSSalP-- 223 (292)
T COG5006 160 WALYIVLGQRAGRAE-HGT------AGVAVGMLVAALIVLPIGAAQAG-P------ALFSPSLLPLALGVAVLSSALP-- 223 (292)
T ss_pred HHHHHHHcchhcccC-CCc------hHHHHHHHHHHHHHhhhhhhhcc-h------hhcChHHHHHHHHHHHHhcccc--
Confidence 999999998766421 111 11223344555554443222111 1 11221110 111222222222
Q ss_pred HHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 297 VFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 297 ~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
|++-+..+. .....+-+++.++|+.++.+.+++++||.+|..||.|+.+++.+..-..+.
T Consensus 224 -YsLEmiAL~-rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 224 -YSLEMIALR-RLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred -hHHHHHHHh-hCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence 333332222 233344567778899999999999999999999999999999987755543
No 32
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.19 E-value=6.2e-12 Score=115.54 Aligned_cols=281 Identities=11% Similarity=0.159 Sum_probs=171.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHH
Q 016214 36 NWKWWIRICFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLT 115 (393)
Q Consensus 36 ~~~~w~~~~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (393)
++|-|+-..+.=++-++. ++....+...-.+|-|-|-.+|+.+..-..+..-+...+++ + ..+-
T Consensus 13 tkk~li~~~LGQiLSL~~-t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~------------~~~~ 76 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLI-TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---K------------YIKA 76 (336)
T ss_pred chhhhheeeHHHHHHHHH-HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---H------------HHHH
Confidence 566565444433332222 23334444444456788888886654322222222222111 1 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCC
Q 016214 116 IISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDEST 195 (393)
Q Consensus 116 ~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~ 195 (393)
.+.-++.+++.=.-.|++--.+++|++....+++..-..+.+.+++|+|+|-|..+.|+.|+++++.|++++...|-..+
T Consensus 77 ~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag 156 (336)
T KOG2766|consen 77 KWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG 156 (336)
T ss_pred HHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc
Confidence 23346666665444566667899999999999999999999999999999999999999999999999997655543222
Q ss_pred CCCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCc-chhhhhhh
Q 016214 196 ESSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGE-WEGLSGEM 274 (393)
Q Consensus 196 ~~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~-~~~l~~~~ 274 (393)
+.+ ...+...|+++.+.++-+||.--+..|...||. +..+++.+.+++|+++..+=.+.+.. ...++
T Consensus 157 d~a--ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-------d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~--- 224 (336)
T KOG2766|consen 157 DRA--GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-------DRVELMGFLGLFGAIISAIQFIFERHHVSTLH--- 224 (336)
T ss_pred ccc--CCCCCccCcEEEEecceeeeeccccHHHHHhcC-------cHHHHHHHHHHHHHHHHHHHHhhhccceeeEe---
Confidence 211 223578999999999999999888878777662 45577778899988887765333321 11221
Q ss_pred hhccchhHHHHHHHHHHHHH-HHHHHHhhhhheeeecchhhhhhhccchhHHHHHH--HHHhCcchhhHHHHHHHHHHHH
Q 016214 275 EEFKLGKVSYLMTLIWTAIG-WQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLA--VIIFHEKMSGLKVIAMVLAIWG 351 (393)
Q Consensus 275 ~~~~~~~~~~~~~l~~~ai~-~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~s--vi~f~E~lt~~~iiG~~lil~G 351 (393)
|.. .... ...+++. +..+.+.-. +.+..++.+-|+- +..+=..+ +-.||-+++|...+++..+..|
T Consensus 225 --w~~-~i~~---yl~f~L~MFllYsl~pi-l~k~~~aT~~nls----lLTsDmwsl~i~~FgYhv~wLY~laF~~i~~G 293 (336)
T KOG2766|consen 225 --WDS-AIFL---YLRFALTMFLLYSLAPI-LIKTNSATMFNLS----LLTSDMWSLLIRTFGYHVDWLYFLAFATIATG 293 (336)
T ss_pred --ehH-HHHH---HHHHHHHHHHHHHhhHH-heecCCceEEEhh----HhHHHHHHHHHHHHhcchhhhhHHHHHHHHHh
Confidence 210 1111 1123333 333333221 2344444333321 11111222 2577888999999999999999
Q ss_pred HHHH
Q 016214 352 FLSY 355 (393)
Q Consensus 352 ~~~~ 355 (393)
+++|
T Consensus 294 liiY 297 (336)
T KOG2766|consen 294 LIIY 297 (336)
T ss_pred hEEe
Confidence 9998
No 33
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.19 E-value=9.6e-11 Score=104.01 Aligned_cols=224 Identities=16% Similarity=0.204 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCC
Q 016214 117 ISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTE 196 (393)
Q Consensus 117 ~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~ 196 (393)
+....+..+++.+.|++|-.+++.++++.++.+....-.|+.+++++.+++|+...++++.++++.|+++++..|. ..
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN--~~ 130 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN--EH 130 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc--hh
Confidence 4445566777888999999999999999999999999999999999999999999999999999999998654432 11
Q ss_pred CCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHH-H--HHhcCcchhhhhh
Q 016214 197 SSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILV-G--LFASGEWEGLSGE 273 (393)
Q Consensus 197 ~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~-~--~~~~~~~~~l~~~ 273 (393)
...++|..++.+|+...|+| +.++|..+.+-++-+.-..+-..+++..++... . +.+++-
T Consensus 131 ------a~e~iGi~~AV~SA~~aAlY----KV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V------- 193 (290)
T KOG4314|consen 131 ------ADEIIGIACAVGSAFMAALY----KVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV------- 193 (290)
T ss_pred ------hhhhhhHHHHHHHHHHHHHH----HHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch-------
Confidence 23799999999999999999 555666554443333222222223333322211 1 222221
Q ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHhh-hhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHH
Q 016214 274 MEEFKLGKVSYLMTLIWTAIGWQVFSIGA-TGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGF 352 (393)
Q Consensus 274 ~~~~~~~~~~~~~~l~~~ai~~~~~~~~~-~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~ 352 (393)
|.|+.-...-|-.+++.+..|.++++.+ .|+ ..+.++.-++...+..|.-...+.++=+-.++...+.|..++..|+
T Consensus 194 -E~~qsFA~~PWG~l~G~A~L~lAFN~~iN~Gi-aL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 194 -EHLQSFAAAPWGCLCGAAGLSLAFNFLINFGI-ALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred -HHHHHHhhCCchhhhhHHHHHHHHhhheeehh-hhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 1221110111233555555566655332 222 2455556666667778888888886666668899999999999999
Q ss_pred HHHHhhccc
Q 016214 353 LSYFYHHYL 361 (393)
Q Consensus 353 ~~~~~~~~~ 361 (393)
++...-..+
T Consensus 272 iLiiiP~d~ 280 (290)
T KOG4314|consen 272 ILIIIPEDK 280 (290)
T ss_pred Hheecccch
Confidence 988764433
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.93 E-value=3.9e-09 Score=87.71 Aligned_cols=121 Identities=17% Similarity=0.139 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHH-HHHHHH
Q 016214 54 QSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGIL-QAAISL 132 (393)
Q Consensus 54 ~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l-~~~~~~ 132 (393)
++.+.++.|...++ .+...+..++...+.+ +++...+...+. .. ....+........|++ .+....
T Consensus 3 ~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 3 WAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP-FK----------NLSPRQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred eeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc-cc----------CCChhhhhhhhHhhccceehHHH
Confidence 34566777777666 6778888888888887 555444422221 01 0111233333444555 477888
Q ss_pred HHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 133 MYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 133 l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
+++.++++++++..+++.+++|++++++++++++|+++++++.|+++.++|++++
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875
No 35
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.92 E-value=4.4e-08 Score=88.82 Aligned_cols=280 Identities=14% Similarity=0.160 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHh----hh-cCCccceeehhhhhcchhHHHHHHHhcc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 016214 51 LGGQSVATLLGRLY----YA-EGGKSKWMAGLVQPAGFPILLPLYLISA-PENIPTSYNSNLHERPPSFLTIISVYVSLG 124 (393)
Q Consensus 51 ~~~~s~~~ll~r~~----~~-~g~~~~~~~t~~~~~~~p~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 124 (393)
.+.+|.+.|++-+. .+ .|+|..++.-.+|...+..-+..+.+.+ .+.|.. ..|+.+...+.
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t-----------~aK~WfpiSfL-- 77 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLT-----------KAKKWFPISFL-- 77 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehh-----------hhhhhcCHHHH--
Confidence 34556666666333 22 3778777766677655555443332211 111111 12344444333
Q ss_pred HHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcc
Q 016214 125 ILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGK 204 (393)
Q Consensus 125 ~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~ 204 (393)
+....+.-.-+++|++++.+++.+++..+.++.....+++.|.+.....+-++.++..+.-.++|. +... ...+.
T Consensus 78 --Lv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~-q~~~--~~~~~ 152 (309)
T COG5070 78 --LVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ-QASA--FKAQI 152 (309)
T ss_pred --HHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh-hHHH--HHhcc
Confidence 233344456799999999999999999999999999999999999999999888888776433332 1110 00011
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhH--
Q 016214 205 YAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKV-- 282 (393)
Q Consensus 205 ~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~-- 282 (393)
--.|.+.+..-|+..+.|...++ |++|-..+. -.+-++|..+.+..+++..-+..+||..-. -+..+.....
T Consensus 153 lN~GY~Wm~~NclssaafVL~mr----kri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n-~annl~~d~l~a 226 (309)
T COG5070 153 LNPGYLWMFTNCLSSAAFVLIMR----KRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGN-LANNLSVDSLMA 226 (309)
T ss_pred cCCceEEEehhhHhHHHHHHHHH----Hhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcch-hhcCCChHHHHH
Confidence 23577788888888888765554 333333332 346678999988877766555556665210 1123332221
Q ss_pred HHHHHHHHHHHHHH-HHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcc
Q 016214 283 SYLMTLIWTAIGWQ-VFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHY 360 (393)
Q Consensus 283 ~~~~~l~~~ai~~~-~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~ 360 (393)
...-.+...++++. .|+ +..+|+.+-+.++.+--....+.|.++|+|+.+..++..+++-...-++|.+.+.
T Consensus 227 m~ISgl~svgiSy~saWc------vrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks 299 (309)
T COG5070 227 MFISGLCSVGISYCSAWC------VRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS 299 (309)
T ss_pred HHHHHHHHhhhhhcccee------EeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111222211 121 3456666667777765555667889999999999999998887776677776543
No 36
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.90 E-value=5.6e-09 Score=86.72 Aligned_cols=71 Identities=23% Similarity=0.423 Sum_probs=62.0
Q ss_pred HHHHHHH-HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCC
Q 016214 121 VSLGILQ-AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNND 192 (393)
Q Consensus 121 ~~~G~l~-~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~ 192 (393)
...|++. ..+..+|++|++|.| +..+++.+++|+|+++++++++|||++++++.+++++++|++++..++.
T Consensus 38 ~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 38 ILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 3335554 377889999999999 5888999999999999999999999999999999999999999876654
No 37
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.75 E-value=6.5e-08 Score=89.79 Aligned_cols=54 Identities=15% Similarity=0.281 Sum_probs=47.9
Q ss_pred hhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHH
Q 016214 302 ATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSY 355 (393)
Q Consensus 302 ~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~ 355 (393)
+..+.++.++...+++.+++..++.++++++|||+++..+++|..+++.|+.+|
T Consensus 169 v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 169 IGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred eeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 444577888899999999999999999999999999999999999999987654
No 38
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.65 E-value=1.8e-06 Score=81.89 Aligned_cols=113 Identities=19% Similarity=0.148 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHH-HHhhHHHHHHHHHHHccCCCChhHHH----HHHHHHHHHHHhh
Q 016214 114 LTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLI-CATQLAFNALFSFFLNSLKFDPYIIN----SLVLLTISSILLA 188 (393)
Q Consensus 114 ~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll-~~~~pift~l~s~i~~kek~t~~~~~----sl~l~~~Gv~ll~ 188 (393)
.+.+...+..|++++..+...+.|+++..+|.+-=+ ...|.+.+.++++++++|--+...+. ++++.++|+++-+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 367888999999999999999999999888766433 47899999999999999988866654 7788999998866
Q ss_pred ccCCCCCCCCccCCcchHHhHHHHHHHHHHHHHHHHHHHH
Q 016214 189 FNNDESTESSDASKGKYAIGFICTVGGSAGYGLILSLTQL 228 (393)
Q Consensus 189 ~~~~~~~~~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~ 228 (393)
..+. .++ ...++++...|.+..+++.+.|..|.++.+.
T Consensus 122 ~~~~-~~~-~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 122 YQDK-KSD-KSSSKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred cccc-ccc-ccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 5554 221 1112344677999999999999999877553
No 39
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.58 E-value=1.8e-07 Score=77.85 Aligned_cols=133 Identities=14% Similarity=0.111 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 016214 45 FYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLG 124 (393)
Q Consensus 45 ~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 124 (393)
++.++.....+..+++.|.--+ |-|+.+-.+.|......++....+...+. ... .+ ..+|.+...+..|
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~-~~~------~~---~~~k~~lflilSG 74 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNW-QAG------GE---IGPKSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCce-ecc------cc---cCcceehhhhHHH
Confidence 4556666778888999997654 33444433444444444444444432111 110 00 1234555666668
Q ss_pred HHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 125 ILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 125 ~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
+..+..-++||.+++-=++|-..-+..++|+++++++++|++||+|..+++|+++.++|+++++
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 8778888899999999999988889999999999999999999999999999999999998754
No 40
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.35 E-value=1.2e-05 Score=75.79 Aligned_cols=129 Identities=14% Similarity=0.110 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCC-ccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYAEGG-KSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYV 121 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~~g~-~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (393)
.....++-.++.+.+.++.|...++.+ +...+..++...+.+++++..+... + .. . . ..+.+....
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~--~~--------~-~-~~~~~~~~~ 195 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG-P--NP--------Q-A-LSLQWGALL 195 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC-C--CC--------C-c-chHHHHHHH
Confidence 445555666677777888887665432 2223333455667666665554311 1 10 0 1 122332233
Q ss_pred HHHHH-HHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHH
Q 016214 122 SLGIL-QAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISS 184 (393)
Q Consensus 122 ~~G~l-~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv 184 (393)
..|++ ......+|+.++++++++.++++.++.|++++++++++++|++++.++.|+++.+.|+
T Consensus 196 ~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 196 YLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 33444 2456779999999999999999999999999999999999999999999999999886
No 41
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.32 E-value=6.4e-06 Score=68.27 Aligned_cols=62 Identities=10% Similarity=0.097 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 127 QAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 127 ~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
++...+++..+++..|+|.+..+-++.+++++++++++++||+|++++.|+.+.++|+++++
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 46677899999999999999999999999999999999999999999999999999999865
No 42
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.32 E-value=7.3e-06 Score=71.05 Aligned_cols=140 Identities=18% Similarity=0.132 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc------CCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCC-CCCchHHHHH
Q 016214 46 YILFLLGGQSVATLLGRLYYAE------GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHE-RPPSFLTIIS 118 (393)
Q Consensus 46 ~~~~~~~~~s~~~ll~r~~~~~------g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 118 (393)
..+.-.+.++...++.|..+++ ..++..+..+.+..++++++|+.++......... ...... ......+.+.
T Consensus 4 ~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (153)
T PF03151_consen 4 LALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSF-FSEIFGEELSSDPNFIF 82 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH-HHHhhhhhhcchHHHHH
Confidence 3445556677777787776665 4577778888888999998888766432210100 000000 0001335566
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHH
Q 016214 119 VYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 119 ~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
..+..|++....|+..+..++++++-+.+++....-+.+.++++++++|++|..++.|++++++|+.+
T Consensus 83 ~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 83 LLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 66667888888899999999999999999999999999999999999999999999999999999875
No 43
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.27 E-value=2.5e-05 Score=76.00 Aligned_cols=63 Identities=21% Similarity=0.246 Sum_probs=57.1
Q ss_pred HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhcc
Q 016214 128 AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFN 190 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~ 190 (393)
+....+.+.|+.+.|++..+-+...+.+++++++..++|||++++.+.|+.++++|.+++...
T Consensus 61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 455677889999999999999999999999999999999999999999999999999975433
No 44
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.22 E-value=3.1e-05 Score=77.20 Aligned_cols=144 Identities=10% Similarity=-0.016 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhh-cchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHH
Q 016214 38 KWWIRICFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQP-AGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTI 116 (393)
Q Consensus 38 ~~w~~~~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~-~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (393)
..|.+.....+.-.++++.+.++.|-.-.+-.+.....++... .+.+...+.... .....+. .. .......
T Consensus 185 ~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~-~~~~~~~--~~-----~~~~~~~ 256 (358)
T PLN00411 185 SDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVV-EKNNPSV--WI-----IHFDITL 256 (358)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHH-ccCCccc--ce-----eccchHH
Confidence 3466666666777777788888887543321122222333223 344443333332 1110000 00 0011122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhcc
Q 016214 117 ISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFN 190 (393)
Q Consensus 117 ~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~ 190 (393)
+. .+..|+..+...++|++++++.+++.+++...++|+|++++++++++|++++.+++|.++.+.|+.++...
T Consensus 257 ~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 257 IT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 11 11123333455678999999999999999999999999999999999999999999999999999986543
No 45
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.14 E-value=1.2e-05 Score=66.42 Aligned_cols=123 Identities=15% Similarity=0.276 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHH--HHHHHHHHHHHH
Q 016214 218 GYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVS--YLMTLIWTAIGW 295 (393)
Q Consensus 218 ~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~l~~~ai~~ 295 (393)
+||.+.++.++..++ .++..+.+|....+.+ +++.....+..+ ...++..... ....++..++.+
T Consensus 2 ~~a~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 68 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK-------ISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAY 68 (126)
T ss_pred eeeeHHHHHHHHhcc-------CCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHH
Confidence 466666666655544 2567788888888776 444333333211 0111111111 112222223333
Q ss_pred HHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 296 QVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 296 ~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
..+..+ .++.+....+.+..++++++.++++++++|++++.+++|+++++.|+++..|
T Consensus 69 ~~~~~a----~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~~ 126 (126)
T PF00892_consen 69 LLYFYA----LKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIST 126 (126)
T ss_pred HHHHHH----HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 333333 2355666677777788889999999999999999999999999999988654
No 46
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.08 E-value=0.00059 Score=67.31 Aligned_cols=110 Identities=13% Similarity=0.058 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHH-HHHHhhHHHHHHHHHHHccCCC---C----hhHHHHHHHHHHHHH
Q 016214 114 LTIISVYVSLGILQAAISLMYSFGYLYLPVSTYS-LICATQLAFNALFSFFLNSLKF---D----PYIINSLVLLTISSI 185 (393)
Q Consensus 114 ~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~as-ll~~~~pift~l~s~i~~kek~---t----~~~~~sl~l~~~Gv~ 185 (393)
.+.+...+..|++++..|..+..+++|+.+|... +-..+|.+++.++..++++|-- + ..-..|++++++|++
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 4677888888999999999999999999888774 4467889999999999988643 2 345678889999999
Q ss_pred Hhhc----cCCCCCCCCccCCcchHHhHHHHHHHHHHHHHHHH
Q 016214 186 LLAF----NNDESTESSDASKGKYAIGFICTVGGSAGYGLILS 224 (393)
Q Consensus 186 ll~~----~~~~~~~~~~~s~~~~~~G~ll~L~aa~~~al~~i 224 (393)
+.+. .+. ..+.++.++.+.-.|+++++.+++.|+.|..
T Consensus 150 l~s~Ag~~k~~-~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 150 IVGRAGQLKER-KMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHhhhhccc-ccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 8765 322 1110001234568999999999999999873
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.07 E-value=0.00011 Score=71.20 Aligned_cols=131 Identities=14% Similarity=0.048 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVS 122 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (393)
.....+...++++.+.++.|.+.++ .++ ...++.+..+..++++..... .. .. ......+...+.
T Consensus 149 G~ll~l~aa~~~a~~~v~~r~~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~-~~--~~----------~~~~~~~~~~l~ 213 (293)
T PRK10532 149 GAALALGAGACWAIYILSGQRAGAE-HGP-ATVAIGSLIAALIFVPIGALQ-AG--EA----------LWHWSILPLGLA 213 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-CCc-hHHHHHHHHHHHHHHHHHHHc-cC--cc----------cCCHHHHHHHHH
Confidence 3344444556666777777765332 232 223454455554444433321 10 00 011122222223
Q ss_pred HHHHH-HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 123 LGILQ-AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 123 ~G~l~-~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
.|+.. .....+|+.++++++++.++++..++|+++.++++++++|++++.+++|.++.+.|++...
T Consensus 214 lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 214 VAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 45542 4556699999999999999999999999999999999999999999999999999998753
No 48
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.05 E-value=2.3e-05 Score=65.44 Aligned_cols=131 Identities=15% Similarity=0.228 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHH-HHH
Q 016214 209 FICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSY-LMT 287 (393)
Q Consensus 209 ~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ 287 (393)
.+.+++|++++++--++.+...|.+ |+..-++--..+..+++...++..|+++.... .....+.| .+.
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v-------dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~----~~~k~~lflilS 73 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV-------DPDFATTIRTIVILIFLLIVLLVTGNWQAGGE----IGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-------CccHHHHHHHHHHHHHHHHHHHhcCceecccc----cCcceehhhhHH
Confidence 4688899999998777766665542 33222333344555555555667776653211 11111111 122
Q ss_pred HHHHHHHHHHHHHhhh-hheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHH
Q 016214 288 LIWTAIGWQVFSIGAT-GLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSY 355 (393)
Q Consensus 288 l~~~ai~~~~~~~~~~-gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~ 355 (393)
-+..+++|..+..... |-...+-+ ++...+.+++++++++++|++|..+++|+++|++|.+..
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvP-----ldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVP-----LDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEE-----cccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 2445556777653321 11111111 233456679999999999999999999999999997653
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.04 E-value=0.00016 Score=70.07 Aligned_cols=66 Identities=12% Similarity=0.039 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 122 SLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 122 ~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
..|+..+....+|+.+++++|++.++++.+..|++..++++++++|+++..+++|+++.+.|+.+.
T Consensus 220 ~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 220 LAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 345445667889999999999999999999999999999999999999999999999999999874
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.99 E-value=0.00019 Score=69.41 Aligned_cols=65 Identities=9% Similarity=0.076 Sum_probs=58.9
Q ss_pred HHH-HHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 124 GIL-QAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 124 G~l-~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
|++ ......+|+.++++.+++.++++..+.|++++++++++++|++++.+++|.++.+.|+.+..
T Consensus 219 ~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 219 AVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 444 34567799999999999999999999999999999999999999999999999999998754
No 51
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.88 E-value=0.00035 Score=67.68 Aligned_cols=139 Identities=14% Similarity=0.221 Sum_probs=88.3
Q ss_pred chHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHH
Q 016214 204 KYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVS 283 (393)
Q Consensus 204 ~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 283 (393)
+...|.++.+.+++.||...+..+.. .. .++.++.+|-..++.+.+++.....++.+.... .++.....
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-------~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~---~~~~~~~~ 73 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-------VPADEILTHRVIWSFFFMVVLMSICRQWSYLKT---LIQTPQKI 73 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-------CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH---HHcCHHHH
Confidence 36789999999999999987666432 11 357788888888887665554433332221111 11111111
Q ss_pred HH--HHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 284 YL--MTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 284 ~~--~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
.. ...+..++.+..+..+ ..+++...++++....|..+.++++++++|+++..+++|+++.+.|+.....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a----~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 74 FMLAVSAVLIGGNWLLFIWA----VNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 11 1112222223333222 2356666677777777778999999999999999999999999999987653
No 52
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.87 E-value=5.1e-05 Score=72.95 Aligned_cols=70 Identities=10% Similarity=0.206 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHH
Q 016214 117 ISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 117 ~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
+......++..+....+|+.++++.|++..+...+++|++..++++++++|++++.+++|..+.++|+.+
T Consensus 211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 3333333444566778999999999999999999999999999999999999999999999999999875
No 53
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.83 E-value=0.00042 Score=67.08 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVS 122 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (393)
.....++.-++.+.+.+..|.. +.+ ++-.+..|..|..+-...++... + +. +|...+.......
T Consensus 153 Gi~~~l~sg~~y~~~~~~~~~~---~~~-~~~~~~~~~~g~~~~~~~~~~~~-~--~~---------~~~~~~~~~~~~~ 216 (290)
T TIGR00776 153 GILLLLMSTIGYLVYVVVAKAF---GVD-GLSVLLPQAIGMVIGGIIFNLGH-I--LA---------KPLKKYAILLNIL 216 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc---CCC-cceehhHHHHHHHHHHHHHHHHH-h--cc---------cchHHHHHHHHHH
Confidence 5555555567777888888854 223 34344445543333222222111 1 10 0112233334444
Q ss_pred HHHHHHHHHHHHHhhhc-ccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHH----HHHHHHHHHHHHhh
Q 016214 123 LGILQAAISLMYSFGYL-YLPVSTYSLICATQLAFNALFSFFLNSLKFDPYII----NSLVLLTISSILLA 188 (393)
Q Consensus 123 ~G~l~~~~~~l~~~sl~-ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~----~sl~l~~~Gv~ll~ 188 (393)
.|++++..+.+|+.|.+ +.+++.++++.+..|+...+++++++||+.+++++ +|.++.+.|+.+++
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 78888888999999999 99999999999999999999999999999999999 99999999998864
No 54
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.79 E-value=0.00047 Score=65.20 Aligned_cols=139 Identities=17% Similarity=0.257 Sum_probs=84.5
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHHHH
Q 016214 207 IGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSYLM 286 (393)
Q Consensus 207 ~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 286 (393)
.|.+++++|++.|+...+..+. ... .++.++.+|-++++.+.+++.....++.+......+..+........
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-------~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-------LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSL 73 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-------CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHH
Confidence 3889999999999998777654 212 36788889999888766555443333222110000101111111111
Q ss_pred HHHH--HHHHHHHHHHhhhhheeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 287 TLIW--TAIGWQVFSIGATGLIFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 287 ~l~~--~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
.+.+ .++.+..+..+ ..+++...++++....|..+.++++++++|+++..+++|.++.++|+.....
T Consensus 74 ~~~g~~~~~~~~~~~~a----~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 74 LLCGLLIGFNWWLFIWA----VNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHHHHH----HHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111 11112222222 2345555667777777778999999999999999999999999999886543
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.69 E-value=0.00041 Score=67.32 Aligned_cols=144 Identities=8% Similarity=-0.046 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-CCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCC-CCCchHHHHHHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYAE-GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHE-RPPSFLTIISVY 120 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~~-g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 120 (393)
..+..++-.++.+...++.|...++ +.++.-+.++.+..+...++|..+.......... +.. .. ............
T Consensus 146 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 146 GFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPH-GFM-QAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHH-HHH-HhhcccCchHHHHHH
Confidence 3333444455556666677654432 3344445555555777777766553211000000 000 00 000001112112
Q ss_pred HHHHH-HHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 121 VSLGI-LQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 121 ~~~G~-l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
+..++ .....|.+++.++++++++++++.....|++++++++++++|++|..++.|.++.+.|+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 22222 223344677789999999999999999999999999999999999999999999999998753
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.55 E-value=0.0025 Score=61.80 Aligned_cols=67 Identities=6% Similarity=-0.108 Sum_probs=59.0
Q ss_pred HHHHHH-HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 122 SLGILQ-AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 122 ~~G~l~-~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
.+|++. +....+|+.++++++++.++.+..+.|++..++++++++|+++..+++|.++.++|+.+..
T Consensus 219 ~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 219 YLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence 334442 4567799999999999999999999999999999999999999999999999999998743
No 57
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.53 E-value=0.00066 Score=57.72 Aligned_cols=61 Identities=16% Similarity=0.135 Sum_probs=55.2
Q ss_pred HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHH--HccCCCChhHHHHHHHHHHHHHHhh
Q 016214 128 AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFF--LNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i--~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
+....+|+.+++..|+|.+.-+.+..++++.+.++. +++|++|+.++.|+++.++|+.++.
T Consensus 59 ~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 59 ALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 566779999999999999999888888888888885 8999999999999999999999864
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.48 E-value=0.0025 Score=63.40 Aligned_cols=145 Identities=10% Similarity=0.006 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCC---ccce---eehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCc-hHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYAEGG---KSKW---MAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPS-FLT 115 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~~g~---~~~~---~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 115 (393)
..+..++-.++.+...++.|...++.. ++.. +..+....+..+++|...+.................... ...
T Consensus 195 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 274 (350)
T PTZ00343 195 AFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGI 274 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHH
Confidence 445555556666777777776554321 1111 112223467777666554321100000000000000000 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 116 IISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 116 ~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
.+...+..|+.....|.+-+.+++.+++.++++.....|+++.++++++++|++|..+++|.++.+.|+.+.
T Consensus 275 ~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 275 IIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 222223334433444444456999999999999999999999999999999999999999999999999874
No 59
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.46 E-value=0.00087 Score=56.17 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=55.1
Q ss_pred HHHHHHHHHhhhcccchHHHHHH-HHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 127 QAAISLMYSFGYLYLPVSTYSLI-CATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 127 ~~~~~~l~~~sl~ylsvs~asll-~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
++...+++..+++++|.+.+-.+ .....+.+++.++++++|++|+.++.++.+.++|++++-
T Consensus 40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 35667788899999999988665 578999999999999999999999999999999998763
No 60
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.44 E-value=0.00031 Score=67.54 Aligned_cols=64 Identities=17% Similarity=0.195 Sum_probs=58.1
Q ss_pred HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccC
Q 016214 128 AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNN 191 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~ 191 (393)
+.....-+.|+.|-|++.-+-+.+++.++.++++..++|||+++.-.+|++++++|..++..+.
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 5556777899999999999999999999999999999999999999999999999999765444
No 61
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.36 E-value=0.0019 Score=53.16 Aligned_cols=60 Identities=17% Similarity=0.057 Sum_probs=52.7
Q ss_pred HHHHHHHHhhhcccchHHH-HHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 128 AAISLMYSFGYLYLPVSTY-SLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~a-sll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
+...++...+++.+|++++ .+-.....+.+++.++++++|++++.++.++.+.+.|++.+
T Consensus 46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4556778899999999987 55666888899999999999999999999999999999864
No 62
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.30 E-value=0.0022 Score=52.27 Aligned_cols=60 Identities=15% Similarity=0.137 Sum_probs=52.6
Q ss_pred HHHHHHHHhhhcccchHHH-HHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 128 AAISLMYSFGYLYLPVSTY-SLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~a-sll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
.....+...+++++|++++ ++-.....+-+++.++++++|+++..+++++.+.+.|++.+
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 3455677899999999986 66677788889999999999999999999999999999865
No 63
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.27 E-value=0.0026 Score=52.56 Aligned_cols=61 Identities=15% Similarity=0.229 Sum_probs=53.5
Q ss_pred HHHHHHHHhhhcccchHHHHHH-HHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 128 AAISLMYSFGYLYLPVSTYSLI-CATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~asll-~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
+....++..+++.+|.+++-.+ .....+.+++.++++++|++|+.++.++.+.++|++++-
T Consensus 41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4556677899999999998665 567889999999999999999999999999999999763
No 64
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.24 E-value=0.003 Score=51.75 Aligned_cols=60 Identities=20% Similarity=0.146 Sum_probs=52.6
Q ss_pred HHHHHHHHhhhcccchHHH-HHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 128 AAISLMYSFGYLYLPVSTY-SLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~a-sll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
+...++...+++.+|++++ ++-.....+.+++.++++++|++|+.++.++.+.++|++.+
T Consensus 40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 4556777899999999887 55566888899999999999999999999999999999975
No 65
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.23 E-value=0.0049 Score=50.89 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=41.0
Q ss_pred hhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhccc
Q 016214 313 FSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYL 361 (393)
Q Consensus 313 ~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~ 361 (393)
....+..+.+.++.++++++|+|+++..+++|.++++.|++...+.+..
T Consensus 62 ~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 62 LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 3345555666779999999999999999999999999999999886543
No 66
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.14 E-value=9.3e-05 Score=68.51 Aligned_cols=144 Identities=22% Similarity=0.175 Sum_probs=102.3
Q ss_pred CCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHH
Q 016214 68 GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMYSFGYLYLPVSTYS 147 (393)
Q Consensus 68 g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~as 147 (393)
||+++. ++.-.+.|..+..+..+++.. |..+.+.+...+..|++++..+...+-|.+|..+|.+-
T Consensus 25 GG~p~q-Q~lGtT~GALifaiiv~~~~~--------------p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkam 89 (288)
T COG4975 25 GGKPYQ-QTLGTTLGALIFAIIVFLFVS--------------PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAM 89 (288)
T ss_pred CCChhH-hhhhccHHHHHHHHHHheeec--------------CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccc
Confidence 444333 777777777776666665321 11245788899999999998898889999998888774
Q ss_pred H-HHHhhHHHHHHHHHHHccCCCChhHH----HHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHHHHHHHHH
Q 016214 148 L-ICATQLAFNALFSFFLNSLKFDPYII----NSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGGSAGYGLI 222 (393)
Q Consensus 148 l-l~~~~pift~l~s~i~~kek~t~~~~----~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~aa~~~al~ 222 (393)
= -..+|.+=+.+++++.++|--+..++ +++++.++|+.+-+..+. .+. ..++.++.-.|+...+.|.+.|-.|
T Consensus 90 PiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~-~nk-~~~~~~n~kkgi~~L~iSt~GYv~y 167 (288)
T COG4975 90 PISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR-NNK-EEENPSNLKKGIVILLISTLGYVGY 167 (288)
T ss_pred cccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc-ccc-cccChHhhhhheeeeeeeccceeee
Confidence 3 34678888999999999999887765 466777788876444443 111 1112234678999999999999999
Q ss_pred HHHHHH
Q 016214 223 LSLTQL 228 (393)
Q Consensus 223 ~il~~~ 228 (393)
.++.|.
T Consensus 168 vvl~~~ 173 (288)
T COG4975 168 VVLFQL 173 (288)
T ss_pred Eeeecc
Confidence 777654
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.06 E-value=0.019 Score=54.21 Aligned_cols=74 Identities=18% Similarity=0.292 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 115 TIISVYVSLGILQA-AISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 115 ~~~~~~~~~G~l~~-~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
+.+......|++.. ....+|+.+++..+++..+.+..+.|++..++++++++|+++..++.|+.+.+.|+.+..
T Consensus 212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 34445555566644 467799999999999999999999999999999999999999999999999999998753
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.95 E-value=0.0099 Score=49.83 Aligned_cols=40 Identities=20% Similarity=0.451 Sum_probs=34.1
Q ss_pred cchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhc
Q 016214 320 LGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 320 l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
+....+.+.++++|+|++|+.+++|+.+++.|++..+...
T Consensus 66 iG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 66 IGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 3445677899999999999999999999999998876543
No 69
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.90 E-value=0.026 Score=53.93 Aligned_cols=140 Identities=20% Similarity=0.207 Sum_probs=81.8
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHH
Q 016214 205 YAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSY 284 (393)
Q Consensus 205 ~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 284 (393)
.-.|+++++.|.+.||+.-.+.+.+ +. .+..++..+-.+++.++.++.+...+.++.+.+ ..+......
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~-------~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~---~~~~p~~~~ 73 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EP-------LPATEILAHRVIWSFPFMLALLFLLRQWRELKQ---LLKQPKTLL 73 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-cc-------CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---HHhCcHHHH
Confidence 3469999999999999865444432 22 245577777777766666655555555554432 222222222
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeecchhhhhhhccchh-HHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 285 LMTLIWTAIGWQVFSIGATGLIFDVSSLFSNVISTLGLP-FVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 285 ~~~l~~~ai~~~~~~~~~~gl~~~~ssl~~~vi~~l~~p-v~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
...+....++.+ |++.+.. +.....+-++ ++....| +.+++|.++|+|+++..|+++.++..+|+..-.+.
T Consensus 74 ~~~l~a~li~~n-W~lfiWA-vn~g~~leaS-LGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 74 MLALTALLIGLN-WWLFIWA-VNNGHVLEAS-LGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHHH-HHHhhee-cCCCchhHHH-hHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 222223223322 2222111 1111212223 2334445 57789999999999999999999999999876653
No 70
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.85 E-value=0.016 Score=55.33 Aligned_cols=114 Identities=14% Similarity=0.065 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 016214 46 YILFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGI 125 (393)
Q Consensus 46 ~~~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 125 (393)
.++.--+++..++.+-|+...+ .|-..+-|..|..+-...+.+..++..+ .|....-...|+
T Consensus 142 ~Ll~stigy~~Y~~~~~~~~~~----~~~~~lPqaiGm~i~a~i~~~~~~~~~~--------------~k~~~~nil~G~ 203 (269)
T PF06800_consen 142 ALLISTIGYWIYSVIPKAFHVS----GWSAFLPQAIGMLIGAFIFNLFSKKPFF--------------EKKSWKNILTGL 203 (269)
T ss_pred HHHHHHHHHHHHHHHHHhcCCC----hhHhHHHHHHHHHHHHHHHhhccccccc--------------ccchHHhhHHHH
Confidence 3344456666666777763333 3434455666655543333221111000 112233445599
Q ss_pred HHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHH
Q 016214 126 LQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSL 177 (393)
Q Consensus 126 l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl 177 (393)
+++..|++|..|.+..-++++-.+.++.++...+.+.+++||+=+++++...
T Consensus 204 ~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~ 255 (269)
T PF06800_consen 204 IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT 255 (269)
T ss_pred HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence 9999999999999999999999999999999999999999999998876533
No 71
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.49 E-value=0.032 Score=54.20 Aligned_cols=140 Identities=13% Similarity=0.131 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-cCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHH
Q 016214 43 ICFYILFLLGGQSVATLLGRLYYA-EGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYV 121 (393)
Q Consensus 43 ~~~~~~~~~~~~s~~~ll~r~~~~-~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (393)
+...+++-++..+......+..++ .+-+...+..+.+..+.|+.++..........+. ...+....|.....+....
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~--~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRS--AIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhH--HHHHHHHhHHHHHHHHHHH
Confidence 555555556666677777755554 4556667777888899998877665411100000 0000001111112222222
Q ss_pred HHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 122 SLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 122 ~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
..+. ..+...+.-.+..++-+.+++..+.-+++.+++++++++++++.+|.|+++.+.|..+-
T Consensus 233 ~~~~---~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 233 LTGA---LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHH---HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 2232 33334445678888889999999999999999999999999999999999999999873
No 72
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.40 E-value=0.012 Score=46.92 Aligned_cols=52 Identities=13% Similarity=0.057 Sum_probs=31.5
Q ss_pred HHHHHHHHhhhcccchHHH-HHHHHhhHHHHHHHHHHHccCCCChhHHHHHHH
Q 016214 128 AAISLMYSFGYLYLPVSTY-SLICATQLAFNALFSFFLNSLKFDPYIINSLVL 179 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~a-sll~~~~pift~l~s~i~~kek~t~~~~~sl~l 179 (393)
+...+++..+++.+|.+++ .+......+.+.+.++++++|++|+.++.++.+
T Consensus 40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 5666789999999999988 555679999999999999999999999999876
No 73
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.30 E-value=0.017 Score=49.04 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=28.9
Q ss_pred HHHHHHH--HHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 324 FVPVLAV--IIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 324 v~~i~sv--i~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
.+.+.++ ++|||++|+.+++|.++|++|++....+
T Consensus 87 ~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 87 LVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 4555555 4899999999999999999999997643
No 74
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.89 E-value=0.026 Score=52.22 Aligned_cols=121 Identities=16% Similarity=0.070 Sum_probs=76.2
Q ss_pred HHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhcc---ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 016214 58 TLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISA---PENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMY 134 (393)
Q Consensus 58 ~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~ 134 (393)
.-+...|.+.+.++.....+.|....|++.+...+.. ....... .. ..........+.. ++..+....+-
T Consensus 97 ~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~----~~~~a~~~~~v 169 (222)
T TIGR00803 97 SGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLIS-NF--GFFIGYPTAVWIV----GLLNVGGGLCI 169 (222)
T ss_pred HhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhh-cc--CcccCCchHHHHH----HHHHHhcCcee
Confidence 3344555555555444456777777777665542211 0000000 00 0000111122222 22234455677
Q ss_pred HhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHH
Q 016214 135 SFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSI 185 (393)
Q Consensus 135 ~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ 185 (393)
++-++|.+..+-++.....++++.++++++++++++..++.|+.+.+.|+.
T Consensus 170 ~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 170 GGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF 220 (222)
T ss_pred eehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence 889999999999999999999999999999999999999999999888764
No 75
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.84 E-value=0.022 Score=47.11 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=52.7
Q ss_pred HHHHHHHHhhhcccchHHHHHHH-HhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHH
Q 016214 128 AAISLMYSFGYLYLPVSTYSLIC-ATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~asll~-~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
-.....|++.+...|.|.+.-+. ++..+||++.++++.+|..+++.++|+.+.+.|+++
T Consensus 52 q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 52 QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34467888999999999998885 889999999999999999999999999999999875
No 76
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=95.65 E-value=0.065 Score=44.26 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 322 LPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 322 ~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
...+.+.++++|+|++++.+++|+.+++.|++..+..
T Consensus 68 ~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 68 IVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3457788999999999999999999999999998654
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.57 E-value=0.057 Score=44.07 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 322 LPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 322 ~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
...+.+.++++|+|+++..+++|..++++|++.-+..
T Consensus 68 ~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 68 IVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4567889999999999999999999999999987764
No 78
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.56 E-value=0.068 Score=50.14 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHH
Q 016214 114 LTIISVYVSLGILQ-AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSI 185 (393)
Q Consensus 114 ~~~~~~~~~~G~l~-~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ 185 (393)
+.++......|++. +.-..+-..++..+|..++.++.+.-|.+.++.++++++|++|..||.++...+.+.+
T Consensus 206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 45666767677765 3333366789999999999999999999999999999999999999999988777665
No 79
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.52 E-value=0.13 Score=50.70 Aligned_cols=133 Identities=14% Similarity=0.082 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 016214 48 LFLLGGQSVATLLGRLYYAEGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQ 127 (393)
Q Consensus 48 ~~~~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~ 127 (393)
+.-.+.++.+.++.+....+ .++..+......+|+++..+...+..++ .. + .-+++.+.....+..++..
T Consensus 174 l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~--~i------~-~~~w~~~~~~~~v~~~~~l 243 (334)
T PF06027_consen 174 LLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERS--GI------E-SIHWTSQVIGLLVGYALCL 243 (334)
T ss_pred HHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehh--hh------h-ccCCChhhHHHHHHHHHHH
Confidence 33444455555666554433 4555666777778888877665543211 11 0 1112234444444334333
Q ss_pred HHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhcc
Q 016214 128 AAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFN 190 (393)
Q Consensus 128 ~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~ 190 (393)
.....+....++++++....+=..+..++..+++++++++++++..++|.++.++|.++....
T Consensus 244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 344445677888999998888888899999999999999999999999999999999975433
No 80
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.51 E-value=0.07 Score=43.67 Aligned_cols=37 Identities=11% Similarity=0.252 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 322 LPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 322 ~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
...+.+.++++|+|++++.+++|+.+++.|++..+..
T Consensus 67 ~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 67 AVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 4557788999999999999999999999999887543
No 81
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.50 E-value=0.065 Score=44.28 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=31.5
Q ss_pred cchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHH
Q 016214 320 LGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSY 355 (393)
Q Consensus 320 l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~ 355 (393)
+....+.+.|+++|||++++.|++|..+++.|++..
T Consensus 72 l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 72 LNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 444568889999999999999999999999998764
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.16 E-value=0.25 Score=40.71 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHH
Q 016214 322 LPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYF 356 (393)
Q Consensus 322 ~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~ 356 (393)
...+.+.++++|+|++++.+++|+.+++.|++..+
T Consensus 73 ~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 73 IAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 45577889999999999999999999999998754
No 83
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.05 E-value=0.59 Score=46.35 Aligned_cols=76 Identities=9% Similarity=0.104 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHH---HH-HhhHHHHHHHHHHHccCCCC------hhHHHHHHHHHHH
Q 016214 114 LTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSL---IC-ATQLAFNALFSFFLNSLKFD------PYIINSLVLLTIS 183 (393)
Q Consensus 114 ~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asl---l~-~~~pift~l~s~i~~kek~t------~~~~~sl~l~~~G 183 (393)
.+........|++++..+.+|..|-...+++.+.+ ++ ++..++..+.+. ++||+=+ +..+.++++.++|
T Consensus 257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g 335 (345)
T PRK13499 257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA 335 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence 45566777889999999999999998886665555 67 777777778787 5998877 6668888888999
Q ss_pred HHHhhcc
Q 016214 184 SILLAFN 190 (393)
Q Consensus 184 v~ll~~~ 190 (393)
.++++.+
T Consensus 336 ~~lig~~ 342 (345)
T PRK13499 336 ANIVGLG 342 (345)
T ss_pred HHHHhhc
Confidence 8887644
No 84
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.45 E-value=0.33 Score=47.33 Aligned_cols=40 Identities=28% Similarity=0.369 Sum_probs=33.7
Q ss_pred cchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhc
Q 016214 320 LGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 320 l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
+..+...+++..+++|+++...++|+++++.|........
T Consensus 85 ~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 85 LSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred hhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 4456688899999999999999999999999988766443
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=94.29 E-value=0.11 Score=49.05 Aligned_cols=55 Identities=15% Similarity=0.223 Sum_probs=47.8
Q ss_pred eecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcccc
Q 016214 308 DVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLD 362 (393)
Q Consensus 308 ~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~ 362 (393)
+.++.+-.++...++++++++++++++.+++..||++.++...|+.+..++...+
T Consensus 40 ~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 40 YLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred hCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 5566666777788899999999999999999999999999999999988766554
No 86
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.27 E-value=0.069 Score=50.63 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=23.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhccccccc
Q 016214 337 MSGLKVIAMVLAIWGFLSYFYHHYLDDFK 365 (393)
Q Consensus 337 lt~~~iiG~~lil~G~~~~~~~~~~~~~~ 365 (393)
-++.+.+|.+++++|..+|..-|..+.++
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik~~~~~~ 142 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIKSEEKEP 142 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeecCCCCCc
Confidence 34789999999999999998877666433
No 87
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=93.09 E-value=1.2 Score=38.15 Aligned_cols=104 Identities=23% Similarity=0.213 Sum_probs=65.6
Q ss_pred cceeehhhhh-cchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHH
Q 016214 71 SKWMAGLVQP-AGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLI 149 (393)
Q Consensus 71 ~~~~~t~~~~-~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll 149 (393)
+++.+++..+ .|+..+....++.+.+ +. . .. +..++..... |++.+....+...+...+.++..+.+
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~--~~---~---~~-~~~p~w~~lG---G~lG~~~V~~~~~~vp~lG~~~~~~l 96 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRP--SL---A---SL-SSVPWWAYLG---GLLGVFFVLSNIILVPRLGAALTTIL 96 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccc--cc---c---hh-ccCChHHhcc---HHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 3555666555 7777777666654322 11 0 00 1111233333 44434555566677888877766544
Q ss_pred -HHhhHHHHHHHHHH----HccCCCChhHHHHHHHHHHHHHH
Q 016214 150 -CATQLAFNALFSFF----LNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 150 -~~~~pift~l~s~i----~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
..-|.+...++..+ .-|++++++|+.|+.+.++|+.+
T Consensus 97 ~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 97 IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 45677778888886 56899999999999999999863
No 88
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.01 E-value=0.89 Score=42.07 Aligned_cols=126 Identities=17% Similarity=0.044 Sum_probs=81.4
Q ss_pred HHHHHHHHhhhc-CCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 016214 56 VATLLGRLYYAE-GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMY 134 (393)
Q Consensus 56 ~~~ll~r~~~~~-g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~ 134 (393)
..++.+|.--+. .........|-+..+.|+++..-++...+.+.. . ......+.+...+..|+...+..++.
T Consensus 169 afVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n---~----annl~~d~l~am~ISgl~svgiSy~s 241 (309)
T COG5070 169 AFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN---L----ANNLSVDSLMAMFISGLCSVGISYCS 241 (309)
T ss_pred HHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch---h----hcCCChHHHHHHHHHHHHHhhhhhcc
Confidence 334444443332 233455566677788888776655532221111 0 11111223334444577666778888
Q ss_pred HhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 135 SFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 135 ~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
.|.++-++..+++++.++.-.-.++-+.+++.+..++.++.++++.++.+++-+
T Consensus 242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa 295 (309)
T COG5070 242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA 295 (309)
T ss_pred ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999888888888888888888888888877777666543
No 89
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=91.92 E-value=0.55 Score=46.54 Aligned_cols=140 Identities=12% Similarity=0.096 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc---ceeehhhhhcchhHHHHHHHhcc-ccCCCCCCCCCCCCCCCchHH
Q 016214 40 WIRICFYILFLLGGQSVATLLGRLYYAEGGKS---KWMAGLVQPAGFPILLPLYLISA-PENIPTSYNSNLHERPPSFLT 115 (393)
Q Consensus 40 w~~~~~~~~~~~~~~s~~~ll~r~~~~~g~~~---~~~~t~~~~~~~p~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 115 (393)
=.++.+..++-...++.+..+.|.--++.|.+ +.+--++..+.+.+++|++++.. .+..+ .+.|. ..+
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-------F~lP~-~~q 316 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-------FELPS-STQ 316 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-------ccCCC-Cce
Confidence 46777777777788888888887655554433 44455666677777777665421 11111 11111 111
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 116 IISVYVSLGIL-QAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 116 ~~~~~~~~G~l-~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
. ...+..|++ ....-++|.+|.-.+++-+.++-.+.+....++...++.++++|+..++|.+..++|-+++.
T Consensus 317 ~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 317 F-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred e-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 1 111112322 25677899999999999999999999999999999999999999999999999999988754
No 90
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=91.18 E-value=6.4 Score=33.72 Aligned_cols=128 Identities=11% Similarity=0.105 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHhcCcchhhhhhhhhccchhHHHHH-H
Q 016214 209 FICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFASGEWEGLSGEMEEFKLGKVSYLM-T 287 (393)
Q Consensus 209 ~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ 287 (393)
.++++.+++.-+++..+..++.++. .+++.-.+.....+++.+.+..+..++. . .+.+....+++++ .
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~------gs~~~as~i~~~~G~i~~~i~~~~~~~~-~----~~~~~~~p~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKAL------GSPLVASFISFGVGFILLLIILLITGRP-S----LASLSSVPWWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh------CccHHHHHHHHHHHHHHHHHHHHHhccc-c----cchhccCChHHhccH
Confidence 5677888888888877777766663 1355555555566777666655555432 1 1222222222222 1
Q ss_pred HHHHHHH-HHHHHHhhhhheeeecchhhhhhhccchh-HHHHHHHH-Hh---CcchhhHHHHHHHHHHHHHH
Q 016214 288 LIWTAIG-WQVFSIGATGLIFDVSSLFSNVISTLGLP-FVPVLAVI-IF---HEKMSGLKVIAMVLAIWGFL 353 (393)
Q Consensus 288 l~~~ai~-~~~~~~~~~gl~~~~ssl~~~vi~~l~~p-v~~i~svi-~f---~E~lt~~~iiG~~lil~G~~ 353 (393)
+++.... ...+.+. ..+......+...... .+.+++.+ .| ..++++.+++|.+++++|+.
T Consensus 72 ~lG~~~V~~~~~~vp------~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 72 LLGVFFVLSNIILVP------RLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHHHHHHhh------hhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 2221111 1111221 1222222222222222 23344443 22 37799999999999999975
No 91
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=89.97 E-value=0.63 Score=45.60 Aligned_cols=145 Identities=12% Similarity=0.083 Sum_probs=88.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CC--ccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCC
Q 016214 35 QNWKWWIRICFYILFLLGGQSVATLLGRLYYAE-GG--KSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPP 111 (393)
Q Consensus 35 ~~~~~w~~~~~~~~~~~~~~s~~~ll~r~~~~~-g~--~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~ 111 (393)
...+|| +.++...-.++.+...++.+....+ |. |+.-..-+.--....++++|+.......... . ....+
T Consensus 158 ~~fn~~--G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~--~---~~~~~ 230 (316)
T KOG1441|consen 158 LSFNLF--GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFV--G---FLTAP 230 (316)
T ss_pred ccccHH--HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccccee--e---eeccc
Confidence 345544 4455566666777778888666542 32 2222222222233444442333211110110 0 00111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 112 SFLTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 112 ~~~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
.........+ ..++..+.|+.-++.+..+++=++++.....-+++...++++++++.|+.+..|+.++++|+.+-
T Consensus 231 ~~~~~~~~~~-~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 231 WFVTFLILLL-NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY 305 (316)
T ss_pred cchhhHHHHH-HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence 1112222222 23544566888889999999999999999999999999999999999999999999999999974
No 92
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=88.86 E-value=12 Score=36.90 Aligned_cols=52 Identities=21% Similarity=0.258 Sum_probs=45.9
Q ss_pred eeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 307 FDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 307 ~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
.+.++.+..+...+++..++++.+++++++++..||.+.++...|+....++
T Consensus 114 ~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 114 SNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred hcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 3566677778888889999999999999999999999999999999998843
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=88.82 E-value=1.1 Score=35.54 Aligned_cols=29 Identities=31% Similarity=0.386 Sum_probs=16.5
Q ss_pred cchhHHHHHHHHHhCcchhhHHHHHHHHH
Q 016214 320 LGLPFVPVLAVIIFHEKMSGLKVIAMVLA 348 (393)
Q Consensus 320 l~~pv~~i~svi~f~E~lt~~~iiG~~li 348 (393)
+....+.+.++++|||++|+.|++|+.+|
T Consensus 65 ~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 65 LGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33456778899999999999999998875
No 94
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=88.69 E-value=3.3 Score=39.62 Aligned_cols=156 Identities=17% Similarity=0.164 Sum_probs=86.3
Q ss_pred CCcCccchhHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCccceeehhhhhcchhHHHHHHH--hcccc-CCCCCCCCC
Q 016214 30 TSPSQQNWKWWIRICFYILFLLGGQSVATLLG-RLYYAEGGKSKWMAGLVQPAGFPILLPLYL--ISAPE-NIPTSYNSN 105 (393)
Q Consensus 30 ~~~~~~~~~~w~~~~~~~~~~~~~~s~~~ll~-r~~~~~g~~~~~~~t~~~~~~~p~ll~~~~--~~~~~-~~~~~~~~~ 105 (393)
.....+...||..+...+.+.++..+.+.+.. +.|...|-..+....+......|..++..- ....+ ..+.++-..
T Consensus 152 ~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~ 231 (330)
T KOG1583|consen 152 SGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLI 231 (330)
T ss_pred cCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceec
Confidence 33345778999999888877777777777766 445455766677788888777776432210 00000 011100000
Q ss_pred CCCCCCchHHHHHHHHHHHHH--HHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHH
Q 016214 106 LHERPPSFLTIISVYVSLGIL--QAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTIS 183 (393)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~G~l--~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~G 183 (393)
.....+ .+.. ..+...-++ ++..-..|.++-. +++=+.++....-=.+..+++.+.++..+|++.|+|..+.++|
T Consensus 232 p~~g~~-vP~~-~~yLl~n~L~Qy~CikgVy~L~te-~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~G 308 (330)
T KOG1583|consen 232 PLLGFK-VPSM-WVYLLFNVLTQYFCIKGVYILTTE-TSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFG 308 (330)
T ss_pred cccCcc-ccHH-HHHHHHHHHHHHHHHHhhhhhhce-ecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHH
Confidence 000000 1111 122211111 0111112222211 1222234555666788999999999999999999999999999
Q ss_pred HHHhh
Q 016214 184 SILLA 188 (393)
Q Consensus 184 v~ll~ 188 (393)
..+.+
T Consensus 309 t~~fa 313 (330)
T KOG1583|consen 309 TLLFA 313 (330)
T ss_pred HHHHH
Confidence 99754
No 95
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=88.42 E-value=0.5 Score=44.82 Aligned_cols=72 Identities=11% Similarity=0.171 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHH
Q 016214 115 TIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 115 ~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
|...+.+.+|++....+.+...|++-=-++--++...++.+|..++-.+|+++.+|++.|.|++..+...+.
T Consensus 251 kdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~ 322 (346)
T KOG4510|consen 251 KDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW 322 (346)
T ss_pred cceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence 344444555777777888899999998888888999999999999999999999999999998765554443
No 96
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.01 E-value=5.2 Score=38.93 Aligned_cols=122 Identities=12% Similarity=0.029 Sum_probs=81.1
Q ss_pred HHHhhhc-CCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016214 61 GRLYYAE-GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPS-FLTIISVYVSLGILQAAISLMYSFGY 138 (393)
Q Consensus 61 ~r~~~~~-g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~l~~~~~~l~~~sl 138 (393)
.|..-+. +-|+.-+..+-.+...|.+....+++-... .. +.+ .++. ....+......|++..+-+++..+..
T Consensus 176 ~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l--~~~---~~~~~~~~~~~~~~lScv~gf~isy~s~~ct 249 (314)
T KOG1444|consen 176 VKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-AL--SLN---FDNWSDSSVLVVMLLSCVMGFGISYTSFLCT 249 (314)
T ss_pred HHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HH--Hhh---cccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3443333 336677777777788888776665542211 11 010 1000 01122222333444446678888999
Q ss_pred cccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhh
Q 016214 139 LYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLA 188 (393)
Q Consensus 139 ~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~ 188 (393)
+++|+.+.++.......-+.+...++.++++++...+|+.+.++|.++-.
T Consensus 250 ~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 250 RVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred hhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 99999999999988888899999999999999999999999999998743
No 97
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=87.65 E-value=4.3 Score=39.98 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHhhHHHHHHHHHHHccC-------CCChhHHHHHHHHHHHHHH
Q 016214 115 TIISVYVSLGILQAAISLMYSFGYLYLPVSTY-SLICATQLAFNALFSFFLNSL-------KFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 115 ~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~a-sll~~~~pift~l~s~i~~ke-------k~t~~~~~sl~l~~~Gv~l 186 (393)
+.+...+..|++++...+.|-.+++|+-+|.- ++...+..++-.++--++.++ +-....++|++++.+|+++
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 35556677799999999999999999877764 344455566666665555432 2345788999999999998
Q ss_pred hhccCC--CCCCCCccCCcchHHhHHHHHHHHHHHHHHHH
Q 016214 187 LAFNND--ESTESSDASKGKYAIGFICTVGGSAGYGLILS 224 (393)
Q Consensus 187 l~~~~~--~~~~~~~~s~~~~~~G~ll~L~aa~~~al~~i 224 (393)
.+.... +.+...+.++.+.-.|.++++.|++..|.+-.
T Consensus 151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~ 190 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNF 190 (344)
T ss_pred HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 753321 01111112233457899999999888777643
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=87.16 E-value=0.27 Score=46.03 Aligned_cols=75 Identities=13% Similarity=0.106 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHH----HHHHHHHHHHHhh
Q 016214 113 FLTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIIN----SLVLLTISSILLA 188 (393)
Q Consensus 113 ~~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~----sl~l~~~Gv~ll~ 188 (393)
.|..+.-..+ |+.++..|+.+..|-+..-++++--++++..+...+-+.+|+|||=|++++. |+++.++|+++++
T Consensus 206 ~K~t~~nii~-G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 206 NKYTWLNIIP-GLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred HHHHHHHHhh-HHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 3445555555 9999999999999999888888878888999999999999999999999865 4456666666543
No 99
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.11 E-value=16 Score=31.84 Aligned_cols=53 Identities=15% Similarity=0.105 Sum_probs=32.4
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHHHHHHh
Q 016214 205 YAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIILVGLFA 263 (393)
Q Consensus 205 ~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l~~~~~ 263 (393)
..+..+.++.|+++-.++-.++.++.+.. .+++--.+....++++.+++..+.
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~------~spl~As~isf~vGt~~L~~l~l~ 55 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYL------GSPLLASLISFLVGTVLLLILLLI 55 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHc------CChHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888777766666655542 235444444556677666554443
No 100
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=83.94 E-value=26 Score=33.62 Aligned_cols=113 Identities=14% Similarity=0.106 Sum_probs=70.6
Q ss_pred cCCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHH--HHHHHHHHHhhhcccchH
Q 016214 67 EGGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGIL--QAAISLMYSFGYLYLPVS 144 (393)
Q Consensus 67 ~g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l--~~~~~~l~~~sl~ylsvs 144 (393)
++..+-.|..+.-..|+|+++.+..++-.-.+.- .++..-|. |.....+...+. ++....+--. +.-.+.
T Consensus 216 ~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~----~fcaehp~--~tyGy~~~~s~~gylG~~~VLalI--~~fGA~ 287 (367)
T KOG1582|consen 216 NPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAW----TFCAEHPV--RTYGYAFLFSLAGYLGIVFVLALI--KLFGAL 287 (367)
T ss_pred CCCCcceEEEeeecccHHHHHHHHHhcccchhhh----HHHHhCcH--hHHHHHHHHHHHhHhhHHHHHHHH--HHhchh
Confidence 4566678888888899999998887542211110 00111121 232222222221 1222222211 223566
Q ss_pred HHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 145 TYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 145 ~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
++.++...-=..|.+++++++.+.+|-...-|.++...|+.+=
T Consensus 288 ~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln 330 (367)
T KOG1582|consen 288 IAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLN 330 (367)
T ss_pred HHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhh
Confidence 6777778888999999999999999999999999999999873
No 101
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=77.72 E-value=18 Score=35.18 Aligned_cols=63 Identities=13% Similarity=0.117 Sum_probs=51.4
Q ss_pred eeeecchhhhhhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcccccccccc
Q 016214 306 IFDVSSLFSNVISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLDDFKSKT 368 (393)
Q Consensus 306 ~~~~ssl~~~vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~~~~~~~ 368 (393)
.+++|.-+..+.-+++..-+.+++.++.+.+.++.+-+-..+|-.|+.++.+.+..++..+..
T Consensus 104 LKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g 166 (327)
T KOG1581|consen 104 LKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSG 166 (327)
T ss_pred HHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccC
Confidence 356776666777788888889999999999999999999999999999999987666444433
No 102
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=74.85 E-value=6.6 Score=32.54 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=29.6
Q ss_pred hccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH
Q 016214 318 STLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLS 354 (393)
Q Consensus 318 ~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~ 354 (393)
.++.-.++.+.++++.+|..+...++|+++++.|+.+
T Consensus 75 Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 75 NSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred hHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3444566888888888888888999999999999754
No 103
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=73.61 E-value=32 Score=32.39 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=43.9
Q ss_pred HHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHHHHHHHHHHHHHHHH
Q 016214 150 CATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGGSAGYGLILSLTQLF 229 (393)
Q Consensus 150 ~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~ 229 (393)
...+.+++.++-+.--||| +......+.+..+|+.++..... .+++ .+....+|.+|+...-..||-=+..++++
T Consensus 76 ~~ie~~Yi~~f~~ya~~k~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~---~~~~~~lG~vc~~~nI~~~~sPL~~m~~V 150 (243)
T KOG1623|consen 76 LVIETVYISIFLYYAPKKK-TVKIVLALVLGVIGLIILLTLLL-FHDP---ERRVSVLGIVCAVFNISMFAAPLSVIRKV 150 (243)
T ss_pred HHHHHHHHHHHheecCchh-eeEeeehHHHHHHHHHHHHHHHh-cCCc---ceeeeeeehhhhhhhHHhhhccHHhhhhh
Confidence 3445555666666556666 55556666666666664322211 1111 12346899999999988888655554433
No 104
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=71.57 E-value=6.7 Score=36.73 Aligned_cols=63 Identities=16% Similarity=-0.001 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHH
Q 016214 124 GILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 124 G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
++..++.+++-+.-..+-.+=+-+++..+.-+||.+.++++++..++.++|+|-++.+.|..+
T Consensus 248 ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 248 AIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 333334556666666666555566777888899999999999999999999999999988775
No 105
>PRK09804 putative cryptic C4-dicarboxylate transporter DcuD; Provisional
Probab=68.97 E-value=1.4e+02 Score=30.99 Aligned_cols=26 Identities=12% Similarity=0.213 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhhccccccccccc
Q 016214 344 AMVLAIWGFLSYFYHHYLDDFKSKTK 369 (393)
Q Consensus 344 G~~lil~G~~~~~~~~~~~~~~~~~~ 369 (393)
-..+++.++.-|.|+||-|+|..++.
T Consensus 202 i~~i~~iai~h~fwqr~~Dkk~~~~~ 227 (455)
T PRK09804 202 SCVIISVAISHFFVQRAFDKKDKNIN 227 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccc
Confidence 44566777888999999988775433
No 106
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.52 E-value=85 Score=27.38 Aligned_cols=107 Identities=22% Similarity=0.169 Sum_probs=61.0
Q ss_pred Cccceeehhhhh-cchhHHHHHHHhccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhccc-chHHH
Q 016214 69 GKSKWMAGLVQP-AGFPILLPLYLISAPENIPTSYNSNLHERPPSFLTIISVYVSLGILQAAISLMYSFGYLYL-PVSTY 146 (393)
Q Consensus 69 ~~~~~~~t~~~~-~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~l~~~sl~yl-svs~a 146 (393)
.+++..+++..+ .|...+.....+ ..+.+.. .. ..+.| +.....-.+|..+...+. ....-+ .+.+.
T Consensus 31 ~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~--a~--~~~~p---wW~~~GG~lGa~~vt~s~---~l~p~lGa~~t~ 99 (150)
T COG3238 31 LGSPLLASLISFLVGTVLLLILLLI-KQGHPGL--AA--VASAP---WWAWIGGLLGAIFVTSSI---LLAPRLGAATTI 99 (150)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHH-hcCCCch--hh--ccCCc---hHHHHccchhhhhhhhhH---HhccchhHHHHH
Confidence 346666776666 667766665555 2221111 00 11112 233343344554433332 233333 34445
Q ss_pred HHHHHhhHHHHHHHHHHHc----cCCCChhHHHHHHHHHHHHHH
Q 016214 147 SLICATQLAFNALFSFFLN----SLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 147 sll~~~~pift~l~s~i~~----kek~t~~~~~sl~l~~~Gv~l 186 (393)
.++...|.+..+++..+=+ ++++++.++.|+++..+|+.+
T Consensus 100 ~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~ 143 (150)
T COG3238 100 ALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILL 143 (150)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 6667778888777776544 599999999999999999554
No 107
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=64.63 E-value=1.1e+02 Score=27.76 Aligned_cols=35 Identities=6% Similarity=0.188 Sum_probs=23.2
Q ss_pred HHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcc
Q 016214 326 PVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHY 360 (393)
Q Consensus 326 ~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~ 360 (393)
-.+|..+|.+-+-+..++|.++.++=+......++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~ 167 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARR 167 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 45678888888888888888777544444444443
No 108
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=63.71 E-value=91 Score=28.40 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=14.6
Q ss_pred CCCcCccchhH----HHHHHHHHHHHHHHHHHH
Q 016214 29 STSPSQQNWKW----WIRICFYILFLLGGQSVA 57 (393)
Q Consensus 29 ~~~~~~~~~~~----w~~~~~~~~~~~~~~s~~ 57 (393)
.+.|+.+++.+ |.+..-+.++.+...+..
T Consensus 64 ~~~~k~~~~~~~~~~~~~~ld~~L~~~~if~~~ 96 (206)
T PF06570_consen 64 KPLPKPKKKNKNSNPWLMALDNSLLFFGIFSLL 96 (206)
T ss_pred ccccCCcccccccchHHHHHHHHHHHHHHHHHH
Confidence 34444444443 776666665555443433
No 109
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=62.40 E-value=10 Score=30.91 Aligned_cols=57 Identities=19% Similarity=0.185 Sum_probs=47.5
Q ss_pred HHHHHHhhhcccchHHHHHH-HHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHH
Q 016214 130 ISLMYSFGYLYLPVSTYSLI-CATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 130 ~~~l~~~sl~ylsvs~asll-~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
...+|++-++..|.+.+.=+ .++..+||++++..+--|..-++-+.|..+..+|+.+
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 35688899999888877543 5568899999999998888899999999999999875
No 110
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=62.08 E-value=1.4e+02 Score=29.64 Aligned_cols=78 Identities=18% Similarity=0.308 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcccc----hHHHHHHHHhhHHHHHHHHHHHc-----cCCCChhHHHHHHHHHHH
Q 016214 113 FLTIISVYVSLGILQAAISLMYSFGYLYLP----VSTYSLICATQLAFNALFSFFLN-----SLKFDPYIINSLVLLTIS 183 (393)
Q Consensus 113 ~~~~~~~~~~~G~l~~~~~~l~~~sl~yls----vs~asll~~~~pift~l~s~i~~-----kek~t~~~~~sl~l~~~G 183 (393)
..+-....++.|.++.....+|-+|=..++ .+...+..++..+|.-+.+.++. .+|.-+.-+.|+.+++++
T Consensus 255 ~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~lkEWKg~s~kt~~vl~~G~~vlI~s 334 (344)
T PF06379_consen 255 LLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLILKEWKGASKKTIRVLVLGIAVLILS 334 (344)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHH
Confidence 345567777789999888899988888776 34455555555555555555443 234445556677777777
Q ss_pred HHHhhcc
Q 016214 184 SILLAFN 190 (393)
Q Consensus 184 v~ll~~~ 190 (393)
+.+++.+
T Consensus 335 ~~ivG~G 341 (344)
T PF06379_consen 335 VVIVGYG 341 (344)
T ss_pred HHHHhcc
Confidence 7766543
No 111
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=59.47 E-value=3.2 Score=40.45 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=37.0
Q ss_pred hccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhcccc
Q 016214 318 STLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHHYLD 362 (393)
Q Consensus 318 ~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~~~~ 362 (393)
+.+..+.+++++..+++|++++...+|++++++|-........++
T Consensus 97 GAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 97 GALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 445667889999999999999999999999999977766544433
No 112
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=58.03 E-value=12 Score=30.49 Aligned_cols=30 Identities=10% Similarity=0.067 Sum_probs=25.6
Q ss_pred HHHHHHHHHhCcchhhHHHHHHHHHHHHHH
Q 016214 324 FVPVLAVIIFHEKMSGLKVIAMVLAIWGFL 353 (393)
Q Consensus 324 v~~i~svi~f~E~lt~~~iiG~~lil~G~~ 353 (393)
+-..+++++++|++++..+.|.++++.+++
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 455678899999999999999999987754
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=54.02 E-value=32 Score=28.09 Aligned_cols=45 Identities=7% Similarity=0.186 Sum_probs=36.2
Q ss_pred HHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccC
Q 016214 147 SLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNN 191 (393)
Q Consensus 147 sll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~ 191 (393)
..--....+...+..+.+-+++++++-++|..++.+|+.++.+.+
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 333445556678889999999999999999999999999865443
No 114
>PRK02237 hypothetical protein; Provisional
Probab=52.53 E-value=1.1e+02 Score=25.05 Aligned_cols=46 Identities=9% Similarity=0.181 Sum_probs=36.6
Q ss_pred HHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccC
Q 016214 146 YSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNN 191 (393)
Q Consensus 146 asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~ 191 (393)
+..--....+...+..+..-++|++++-++|..++.+|+.++.+.+
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3444445556677899999999999999999999999999765443
No 115
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=51.95 E-value=1.7e+02 Score=25.90 Aligned_cols=104 Identities=14% Similarity=0.246 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHH-HHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHH-------HHHHHHHhh
Q 016214 117 ISVYVSLGILQAAISL-MYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVL-------LTISSILLA 188 (393)
Q Consensus 117 ~~~~~~~G~l~~~~~~-l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l-------~~~Gv~ll~ 188 (393)
+.+.....+.+..+++ +--.++.|+---.+.+.. .+.+=....+..|..++.++.+|+.+ +..|++++-
T Consensus 47 FV~t~as~~~~~v~~~iL~pl~l~yLRtiafIlVI---Av~VQf~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln 123 (193)
T COG4657 47 FVMTLASICAWLVDTFILIPLGLEYLRTIAFILVI---AVVVQFTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLN 123 (193)
T ss_pred HHHHHHHHHHHHHHhHhhhccChHHHHHHHHHHHH---HHHHHHHHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHH
Confidence 3333333444444433 334455554322222222 22344456778899999999999976 566777754
Q ss_pred ccCCCCCCCCccCCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016214 189 FNNDESTESSDASKGKYAIGFICTVGGSAGYGLILSLTQLFFERV 233 (393)
Q Consensus 189 ~~~~~~~~~~~~s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~ 233 (393)
.+.+ .+..--.+.+++|++.|++-+++..-.++|.
T Consensus 124 ~~~~----------~~f~qsv~~gf~a~lGfslvmvlfA~iRER~ 158 (193)
T COG4657 124 INEG----------HNFLQSVVYGFGAALGFSLVMVLFAAIRERL 158 (193)
T ss_pred hhhh----------hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHH
Confidence 3332 1256677888999999999988887777763
No 116
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=48.76 E-value=2e+02 Score=27.28 Aligned_cols=116 Identities=19% Similarity=0.117 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHh-hHHHHHHHHHH-Hc---cCCC--ChhHHHHHHHHHHHHHHhhc
Q 016214 117 ISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICAT-QLAFNALFSFF-LN---SLKF--DPYIINSLVLLTISSILLAF 189 (393)
Q Consensus 117 ~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~-~pift~l~s~i-~~---kek~--t~~~~~sl~l~~~Gv~ll~~ 189 (393)
..+..+-|.+++..|.+---.++.+-.+....+-++ +.+..-..+.+ ++ +|.+ .+...+|++++++|.++...
T Consensus 55 ~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 55 YPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred eeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 345566678888888877778888877777776665 33333333332 22 2333 45667788888888886532
Q ss_pred -cCCC-----CCC--------------C----CccC-------CcchHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016214 190 -NNDE-----STE--------------S----SDAS-------KGKYAIGFICTVGGSAGYGLILSLTQLFFER 232 (393)
Q Consensus 190 -~~~~-----~~~--------------~----~~~s-------~~~~~~G~ll~L~aa~~~al~~il~~~~~~k 232 (393)
.+.. ..+ . ++.+ .++.+.|.++++.+++.||..++=.+...++
T Consensus 135 ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 135 IKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ecCCCCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 1110 000 0 0001 1257899999999999999876666655544
No 117
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=46.97 E-value=6.4 Score=37.71 Aligned_cols=49 Identities=8% Similarity=0.126 Sum_probs=0.0
Q ss_pred hhhcccchHHHHHHHHhhHHHHHHH--HHHHccCCCChhHHHHHHHHHHHH
Q 016214 136 FGYLYLPVSTYSLICATQLAFNALF--SFFLNSLKFDPYIINSLVLLTISS 184 (393)
Q Consensus 136 ~sl~ylsvs~asll~~~~pift~l~--s~i~~kek~t~~~~~sl~l~~~Gv 184 (393)
.-++-.+-+..+++.+...+.+.|+ -++|.|+-+-+.-.++++++++-.
T Consensus 42 iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~l 92 (381)
T PF05297_consen 42 IIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVL 92 (381)
T ss_dssp ---------------------------------------------------
T ss_pred HHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHH
Confidence 3344455555677777776654333 333334445566666666555433
No 118
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.12 E-value=34 Score=27.54 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=27.5
Q ss_pred hHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHH
Q 016214 323 PFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSY 355 (393)
Q Consensus 323 pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~ 355 (393)
.+-..++++.++|++.+..+.|.++++.|++..
T Consensus 81 ~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 81 AIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 345568999999999999999999998886653
No 119
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=42.10 E-value=83 Score=25.65 Aligned_cols=46 Identities=11% Similarity=0.188 Sum_probs=36.9
Q ss_pred HHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHhhccC
Q 016214 146 YSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILLAFNN 191 (393)
Q Consensus 146 asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll~~~~ 191 (393)
+..--....+...+..+..-+.+++++-+.|-.++++|+.++.+.+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 3444455667788889999999999999999999999988765443
No 120
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=41.37 E-value=42 Score=24.97 Aligned_cols=19 Identities=32% Similarity=0.693 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHH-Hhhc
Q 016214 341 KVIAMVLAIWGFLSY-FYHH 359 (393)
Q Consensus 341 ~iiG~~lil~G~~~~-~~~~ 359 (393)
-++++.+++.|+++| .|.+
T Consensus 6 iLi~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 356777778887777 4443
No 121
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=39.14 E-value=38 Score=27.62 Aligned_cols=29 Identities=14% Similarity=0.022 Sum_probs=24.2
Q ss_pred HHHHHHHHccCCCChhHHHHHHHHHHHHH
Q 016214 157 NALFSFFLNSLKFDPYIINSLVLLTISSI 185 (393)
Q Consensus 157 t~l~s~i~~kek~t~~~~~sl~l~~~Gv~ 185 (393)
-++|+.+++||++++....|-+....++.
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 46789999999999999999887765554
No 122
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=39.09 E-value=70 Score=26.56 Aligned_cols=17 Identities=24% Similarity=0.501 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 016214 39 WWIRICFYILFLLGGQS 55 (393)
Q Consensus 39 ~w~~~~~~~~~~~~~~s 55 (393)
-|-.+++..+++++|..
T Consensus 40 pwK~I~la~~Lli~G~~ 56 (115)
T PF05915_consen 40 PWKSIALAVFLLIFGTV 56 (115)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 38888887777777744
No 123
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=38.49 E-value=11 Score=34.49 Aligned_cols=42 Identities=33% Similarity=0.589 Sum_probs=34.4
Q ss_pred hhhccchhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHh
Q 016214 316 VISTLGLPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFY 357 (393)
Q Consensus 316 vi~~l~~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~ 357 (393)
-+..+--..+-++++++++|.+...+++..++.+.|++...|
T Consensus 84 ai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 84 AIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred HHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 334455567889999999999999999999999999876554
No 124
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=34.43 E-value=46 Score=24.91 Aligned_cols=25 Identities=12% Similarity=0.437 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhhccccccccccc
Q 016214 345 MVLAIWGFLSYFYHHYLDDFKSKTK 369 (393)
Q Consensus 345 ~~lil~G~~~~~~~~~~~~~~~~~~ 369 (393)
+++.+++++.-.|.|.++++++..+
T Consensus 42 i~~~~lt~ltN~YFK~k~drr~~a~ 66 (68)
T PF04971_consen 42 IFFGLLTYLTNLYFKIKEDRRKAAR 66 (68)
T ss_pred HHHHHHHHHhHhhhhhhHhhhHhhc
Confidence 4445666667778887777665543
No 125
>PF15471 TMEM171: Transmembrane protein family 171
Probab=34.08 E-value=46 Score=31.76 Aligned_cols=26 Identities=12% Similarity=0.284 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccccc
Q 016214 339 GLKVIAMVLAIWGFLSYFYHHYLDDF 364 (393)
Q Consensus 339 ~~~iiG~~lil~G~~~~~~~~~~~~~ 364 (393)
..|++|-++++.|+..+...+-|++.
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKKr~ 186 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKKRN 186 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeeecc
Confidence 36899999999999999887655443
No 126
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=33.42 E-value=33 Score=33.00 Aligned_cols=111 Identities=13% Similarity=0.064 Sum_probs=61.4
Q ss_pred CCccceeehhhhhcchhHHHHHHHhccccCCCCCCCCCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH
Q 016214 68 GGKSKWMAGLVQPAGFPILLPLYLISAPENIPTSYNSNLHERPPS-FLTIISVYVSLGILQAAISLMYSFGYLYLPVSTY 146 (393)
Q Consensus 68 g~~~~~~~t~~~~~~~p~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~a 146 (393)
-++..|..|+-+..-..++++|..+..-+.++. ...+.. ..+.+......|++...-++.-.+=++.+|+=+.
T Consensus 211 v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v------~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplTh 284 (347)
T KOG1442|consen 211 VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAV------VGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTH 284 (347)
T ss_pred ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHH------cCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEeccccee
Confidence 467899999998877777777765432211111 001111 2344555555566544445555556666777666
Q ss_pred HHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHH
Q 016214 147 SLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISS 184 (393)
Q Consensus 147 sll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv 184 (393)
-+-.....+--.++++.++.|.-+...|-|.++..+|.
T Consensus 285 nISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs 322 (347)
T KOG1442|consen 285 NISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGS 322 (347)
T ss_pred eecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehh
Confidence 55555555555666666666665555555444444333
No 127
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=32.92 E-value=4.7e+02 Score=25.46 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=25.8
Q ss_pred CcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016214 31 SPSQQNWKWWIRICFYILFLLGGQSVATLLGRLYYA 66 (393)
Q Consensus 31 ~~~~~~~~~w~~~~~~~~~~~~~~s~~~ll~r~~~~ 66 (393)
.|...+-+.-........+++++.+.+.+++.+...
T Consensus 93 ~P~~~~~~~i~~tF~~ssIlLl~~Siss~iG~YiLa 128 (299)
T PF05884_consen 93 PPEKLSTSSIVETFSWSSILLLGFSISSFIGGYILA 128 (299)
T ss_pred CCcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366666666666777777888888888888876653
No 128
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=31.66 E-value=3.9e+02 Score=24.17 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccch------------HHHHHHHHhhHHHHHHHHHHHccCCC-------------
Q 016214 115 TIISVYVSLGILQAAISLMYSFGYLYLPV------------STYSLICATQLAFNALFSFFLNSLKF------------- 169 (393)
Q Consensus 115 ~~~~~~~~~G~l~~~~~~l~~~sl~ylsv------------s~asll~~~~pift~l~s~i~~kek~------------- 169 (393)
+.+...+..|+....+...|..+...+.. ..|.+ ..+.|+...+..+.+.++|.
T Consensus 113 ~~~~lg~~~~~~~~~~~~~~laa~~~I~~~~~~~~~~~~~l~~y~~-i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~ 191 (214)
T PF11139_consen 113 GAFWLGFVLGLANPKTMLPYLAAIAIIAASGLSPGTQVVALVVYCL-IASLPALLPLLAYLVAPERAEPWLERLRSWLRR 191 (214)
T ss_pred hHHHHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 45566665565544444566555443221 12222 35566667777777777665
Q ss_pred ChhHHHHHHHHHHHHHHh
Q 016214 170 DPYIINSLVLLTISSILL 187 (393)
Q Consensus 170 t~~~~~sl~l~~~Gv~ll 187 (393)
+.+.+++.++..+|+.++
T Consensus 192 ~~~~i~~~i~~i~G~~l~ 209 (214)
T PF11139_consen 192 HSRQILAVILLIVGALLL 209 (214)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 233445555556665553
No 129
>PRK02237 hypothetical protein; Provisional
Probab=31.44 E-value=70 Score=26.26 Aligned_cols=37 Identities=8% Similarity=0.045 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhc
Q 016214 323 PFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 323 pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
..+.+..+.+-+.+.+..-++|..++++|..+..++.
T Consensus 71 ~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 71 AGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3456778888899999999999999999998887764
No 130
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=30.27 E-value=43 Score=27.59 Aligned_cols=54 Identities=17% Similarity=0.087 Sum_probs=30.3
Q ss_pred cCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHHHHHHH
Q 016214 166 SLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGGSAGYG 220 (393)
Q Consensus 166 kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~aa~~~a 220 (393)
+-|+++.+-.++.+.++|.++...+-.-..... .-.-..++|++..++|.+.|.
T Consensus 5 ~~KiN~~R~~al~lif~g~~vmy~gi~f~~~~~-im~ifmllG~L~~l~S~~VYf 58 (114)
T PF11023_consen 5 SSKINKIRTFALSLIFIGMIVMYIGIFFKASPI-IMVIFMLLGLLAILASTAVYF 58 (114)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcccHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 457888899999999999987543322011000 000123566666666665553
No 131
>PF12868 DUF3824: Domain of unknwon function (DUF3824); InterPro: IPR024436 This repeating domain is proline-rich but its function is unknown.
Probab=28.87 E-value=72 Score=27.36 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=10.7
Q ss_pred HHHHHHHHHhhccccccccc
Q 016214 348 AIWGFLSYFYHHYLDDFKSK 367 (393)
Q Consensus 348 il~G~~~~~~~~~~~~~~~~ 367 (393)
+-+|.+...|.+++++||++
T Consensus 17 AG~G~AA~~~~krk~kK~~e 36 (137)
T PF12868_consen 17 AGAGYAAHKYKKRKEKKKEE 36 (137)
T ss_pred HHHHHHHHHHHHHHhhhhhh
Confidence 34555555666555555443
No 132
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=28.60 E-value=7.7e+02 Score=26.57 Aligned_cols=21 Identities=19% Similarity=0.026 Sum_probs=13.6
Q ss_pred CCCChhHHHHHHHHHHHHHHh
Q 016214 167 LKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 167 ek~t~~~~~sl~l~~~Gv~ll 187 (393)
++..+..+.+.++.++++.++
T Consensus 377 r~~Kw~li~~~~~~ta~~Gam 397 (599)
T PF06609_consen 377 RHIKWQLIFGSVLMTAFCGAM 397 (599)
T ss_pred cchhHHHHHHHHHHHHHHHHH
Confidence 566666667777777665544
No 133
>PRK02935 hypothetical protein; Provisional
Probab=28.49 E-value=38 Score=27.59 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=31.1
Q ss_pred ccCCCChhHHHHHHHHHHHHHHhhccCCCCCCCCccCCcchHHhHHHHHHHHHHH
Q 016214 165 NSLKFDPYIINSLVLLTISSILLAFNNDESTESSDASKGKYAIGFICTVGGSAGY 219 (393)
Q Consensus 165 ~kek~t~~~~~sl~l~~~Gv~ll~~~~~~~~~~~~~s~~~~~~G~ll~L~aa~~~ 219 (393)
..-|+++.+-.++.+.++|.++...+-.-.+... .-.-..++|+++.++|.+.|
T Consensus 5 ~ssKINkiRt~aL~lvfiG~~vMy~Giff~~~~~-~m~ifm~~G~l~~l~S~vvY 58 (110)
T PRK02935 5 YSNKINKIRTFALSLVFIGFIVMYLGIFFRESII-IMTIFMLLGFLAVIASTVVY 58 (110)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHHHHHH
Confidence 4567888899999999999987543322001000 00011356666666666655
No 134
>PF15102 TMEM154: TMEM154 protein family
Probab=27.62 E-value=59 Score=28.15 Aligned_cols=21 Identities=10% Similarity=-0.014 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHhhccccccc
Q 016214 345 MVLAIWGFLSYFYHHYLDDFK 365 (393)
Q Consensus 345 ~~lil~G~~~~~~~~~~~~~~ 365 (393)
.++++..++++.+.|+++.|+
T Consensus 69 vlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 69 VLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHheeEEeecccCC
Confidence 344455555655555444443
No 135
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.21 E-value=1.4e+02 Score=24.10 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=28.3
Q ss_pred HHhhHHH----HHHHHHHHccCCCChhHHHHHHHHHHHHHH
Q 016214 150 CATQLAF----NALFSFFLNSLKFDPYIINSLVLLTISSIL 186 (393)
Q Consensus 150 ~~~~pif----t~l~s~i~~kek~t~~~~~sl~l~~~Gv~l 186 (393)
+.+|=+. -..|+++.+||.+++..+.+-.+...|+.+
T Consensus 72 K~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 72 KTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 4455444 346899999999999999998877777665
No 136
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=27.15 E-value=2.2e+02 Score=25.03 Aligned_cols=54 Identities=9% Similarity=0.108 Sum_probs=32.5
Q ss_pred CCcchHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHhHHHHHHHHH
Q 016214 201 SKGKYAIGFICTVGGSAGYGLILSLTQLFFERVFKKETFTVVLDMIIYPSLVSTCIIL 258 (393)
Q Consensus 201 s~~~~~~G~ll~L~aa~~~al~~il~~~~~~k~~~~~~~~~~l~~~~y~~l~a~i~~l 258 (393)
+++++..|-.+.|.|-+..+.-..-.-.+++.. . ...-+++++|.-+.++.++.
T Consensus 116 SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~---v-tl~GFTL~fWCeFtAsFLfF 169 (184)
T PF15108_consen 116 SRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQ---V-TLIGFTLMFWCEFTASFLFF 169 (184)
T ss_pred hhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcc---h-hhhhhHHHHHHHHHHHHHHH
Confidence 567899999999998777654322222223321 1 13456778888777765543
No 137
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=26.73 E-value=76 Score=25.98 Aligned_cols=37 Identities=5% Similarity=0.023 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhhc
Q 016214 323 PFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 323 pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
..+.+-++.+-+++.+..-++|..+++.|..+..+.+
T Consensus 69 ~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 69 VASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 3466678888899999999999999999999887764
No 138
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=25.83 E-value=65 Score=31.22 Aligned_cols=37 Identities=11% Similarity=0.309 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHhh
Q 016214 322 LPFVPVLAVIIFHEKMSGLKVIAMVLAIWGFLSYFYH 358 (393)
Q Consensus 322 ~pv~~i~svi~f~E~lt~~~iiG~~lil~G~~~~~~~ 358 (393)
++++.+++..+++.+++..||.|+..+.+|++..-+.
T Consensus 123 iIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 123 IIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred hhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 4678899999999999999999999999999887654
No 139
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=25.29 E-value=1e+02 Score=25.89 Aligned_cols=15 Identities=13% Similarity=0.166 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHH
Q 016214 341 KVIAMVLAIWGFLSY 355 (393)
Q Consensus 341 ~iiG~~lil~G~~~~ 355 (393)
.+.+++..+.|++.+
T Consensus 96 e~~~~l~~l~~l~~~ 110 (135)
T PF04246_consen 96 ELWAILGGLLGLALG 110 (135)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444433
No 140
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=25.03 E-value=77 Score=30.27 Aligned_cols=24 Identities=25% Similarity=0.378 Sum_probs=20.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhc
Q 016214 336 KMSGLKVIAMVLAIWGFLSYFYHH 359 (393)
Q Consensus 336 ~lt~~~iiG~~lil~G~~~~~~~~ 359 (393)
.+|..|+++..+++.|+....+.+
T Consensus 234 ~ls~~Q~~sl~~i~~g~~~~~~~~ 257 (269)
T PRK12437 234 WLRIAQVISIPLIIIGIILIIYRR 257 (269)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHH
Confidence 379999999999999998876654
No 141
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=24.30 E-value=1.4e+02 Score=31.01 Aligned_cols=24 Identities=4% Similarity=-0.118 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcc
Q 016214 337 MSGLKVIAMVLAIWGFLSYFYHHY 360 (393)
Q Consensus 337 lt~~~iiG~~lil~G~~~~~~~~~ 360 (393)
++..|++++.+++.|+++..+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999988877654
No 142
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=24.10 E-value=1.8e+02 Score=28.14 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=29.5
Q ss_pred cchhHHHHHHHHHhCcchhhHHHHHHHHH--HHHHHHHHhhccc
Q 016214 320 LGLPFVPVLAVIIFHEKMSGLKVIAMVLA--IWGFLSYFYHHYL 361 (393)
Q Consensus 320 l~~pv~~i~svi~f~E~lt~~~iiG~~li--l~G~~~~~~~~~~ 361 (393)
...|.+.+..+..|+-+++..++++.+++ +.|.+...+.+.+
T Consensus 95 ~~n~~~~~~~~~~lg~~~~~~r~~~~~~~~~~~g~l~~~~~~~~ 138 (307)
T PF03773_consen 95 LLNPIVLLLTWAALGWKFTLIRIVLGLILAILVGLLFSRLFKRR 138 (307)
T ss_pred HhhHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 33467777788899999998888877665 5566665555444
No 143
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=23.98 E-value=57 Score=22.22 Aligned_cols=7 Identities=29% Similarity=0.387 Sum_probs=3.3
Q ss_pred HHHHHHH
Q 016214 350 WGFLSYF 356 (393)
Q Consensus 350 ~G~~~~~ 356 (393)
.|+.+|.
T Consensus 21 iGl~IyQ 27 (49)
T PF11044_consen 21 IGLSIYQ 27 (49)
T ss_pred HHHHHHH
Confidence 3444554
No 144
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=23.95 E-value=5.7e+02 Score=27.41 Aligned_cols=32 Identities=16% Similarity=0.015 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccccccccccC
Q 016214 339 GLKVIAMVLAIWGFLSYFYHHYLDDFKSKTKD 370 (393)
Q Consensus 339 ~~~iiG~~lil~G~~~~~~~~~~~~~~~~~~~ 370 (393)
..-.++++++++.++.++....++.++|++..
T Consensus 530 ~~~giAcl~~l~~~~~iq~~l~~~~~i~~~~~ 561 (618)
T KOG3762|consen 530 RIFGIACLVTLALFISIQLLLKRRGFIKEQGL 561 (618)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccccccCccCC
Confidence 34556677777777777765555554444433
No 145
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=22.14 E-value=79 Score=26.55 Aligned_cols=8 Identities=25% Similarity=0.604 Sum_probs=3.7
Q ss_pred HHHHHhhc
Q 016214 352 FLSYFYHH 359 (393)
Q Consensus 352 ~~~~~~~~ 359 (393)
++.|..++
T Consensus 83 li~y~irR 90 (122)
T PF01102_consen 83 LISYCIRR 90 (122)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44555443
No 146
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=21.30 E-value=8e+02 Score=24.23 Aligned_cols=74 Identities=12% Similarity=0.047 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHhhHHHHHHHHHHHccCCCChhHHHHHHHHHHHHHHh
Q 016214 114 LTIISVYVSLGILQAAISLMYSFGYLYLPVSTYSLICATQLAFNALFSFFLNSLKFDPYIINSLVLLTISSILL 187 (393)
Q Consensus 114 ~~~~~~~~~~G~l~~~~~~l~~~sl~ylsvs~asll~~~~pift~l~s~i~~kek~t~~~~~sl~l~~~Gv~ll 187 (393)
.+.+......|++.......-+.=+..+|+=+-++..-..-+-+.+++.++++++++-..|.|+.++..|+.+-
T Consensus 240 ~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 240 LRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 34444555556654444444555666788777788788888999999999999999999999999999999863
No 147
>PRK01844 hypothetical protein; Provisional
Probab=20.55 E-value=1.8e+02 Score=22.00 Aligned_cols=28 Identities=21% Similarity=0.542 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016214 40 WIRICFYILFLLGGQSVATLLGRLYYAE 67 (393)
Q Consensus 40 w~~~~~~~~~~~~~~s~~~ll~r~~~~~ 67 (393)
|+.+.+.++.+++|..++-.+.|.++.+
T Consensus 4 ~~~I~l~I~~li~G~~~Gff~ark~~~k 31 (72)
T PRK01844 4 WLGILVGVVALVAGVALGFFIARKYMMN 31 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555566678888888888888877665
Done!