Query 016216
Match_columns 393
No_of_seqs 224 out of 1863
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 09:51:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 7.3E-78 2.5E-82 610.3 36.9 329 55-385 4-332 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 7.8E-74 2.7E-78 585.0 38.9 342 33-385 15-359 (520)
3 3rh9_A Succinate-semialdehyde 100.0 2.2E-73 7.5E-78 580.0 40.7 326 56-385 10-336 (506)
4 3ifg_A Succinate-semialdehyde 100.0 1E-73 3.5E-78 580.2 37.8 325 57-385 12-337 (484)
5 2o2p_A Formyltetrahydrofolate 100.0 1.9E-73 6.5E-78 581.8 38.5 326 59-385 38-368 (517)
6 3b4w_A Aldehyde dehydrogenase; 100.0 3.8E-73 1.3E-77 577.5 39.2 328 56-385 7-334 (495)
7 1bxs_A Aldehyde dehydrogenase; 100.0 5.8E-73 2E-77 576.6 39.3 326 59-385 22-349 (501)
8 3ek1_A Aldehyde dehydrogenase; 100.0 2.8E-73 9.4E-78 579.0 36.7 325 57-385 32-357 (504)
9 3i44_A Aldehyde dehydrogenase; 100.0 6.3E-73 2.1E-77 575.8 37.8 336 45-385 12-349 (497)
10 1a4s_A ALDH, betaine aldehyde 100.0 1E-72 3.4E-77 575.5 39.0 325 56-385 18-343 (503)
11 3k2w_A Betaine-aldehyde dehydr 100.0 9.5E-73 3.3E-77 575.2 38.2 328 54-385 9-337 (497)
12 3iwj_A Putative aminoaldehyde 100.0 1.6E-72 5.5E-77 574.3 39.9 329 55-385 5-340 (503)
13 3u4j_A NAD-dependent aldehyde 100.0 1.4E-72 4.8E-77 576.7 39.1 325 57-385 22-350 (528)
14 1o04_A Aldehyde dehydrogenase, 100.0 7.6E-73 2.6E-77 575.6 36.5 326 59-385 21-348 (500)
15 4f3x_A Putative aldehyde dehyd 100.0 1.1E-72 3.6E-77 574.3 36.6 325 56-385 24-349 (498)
16 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.3E-72 7.7E-77 574.4 36.9 324 58-385 27-351 (515)
17 3r31_A BADH, betaine aldehyde 100.0 1.6E-72 5.3E-77 575.1 35.7 322 56-385 13-338 (517)
18 3qan_A 1-pyrroline-5-carboxyla 100.0 7.6E-72 2.6E-76 572.5 40.1 323 57-385 37-367 (538)
19 4e4g_A Methylmalonate-semialde 100.0 4.7E-72 1.6E-76 572.0 36.9 326 55-385 24-351 (521)
20 2ve5_A BADH, betaine aldehyde 100.0 6.9E-72 2.4E-76 568.9 37.2 328 54-384 3-331 (490)
21 1wnd_A Putative betaine aldehy 100.0 7.9E-72 2.7E-76 567.5 36.5 323 58-385 24-347 (495)
22 2imp_A Lactaldehyde dehydrogen 100.0 8.7E-72 3E-76 566.4 36.1 325 57-385 6-332 (479)
23 3jz4_A Succinate-semialdehyde 100.0 1.3E-71 4.4E-76 565.4 37.2 325 57-385 9-334 (481)
24 3prl_A NADP-dependent glyceral 100.0 1.2E-71 3.9E-76 567.6 36.6 322 57-385 11-338 (505)
25 2w8n_A Succinate-semialdehyde 100.0 2.7E-71 9.1E-76 563.3 35.1 322 58-385 13-339 (487)
26 4dng_A Uncharacterized aldehyd 100.0 7E-71 2.4E-75 560.8 35.9 325 57-385 6-333 (485)
27 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.1E-70 3.8E-75 562.4 36.3 322 58-385 38-367 (516)
28 3pqa_A Lactaldehyde dehydrogen 100.0 9.7E-71 3.3E-75 558.3 35.2 316 60-385 2-321 (486)
29 3r64_A NAD dependent benzaldeh 100.0 1.6E-70 5.6E-75 560.2 36.4 327 55-385 10-340 (508)
30 1t90_A MMSDH, probable methylm 100.0 2.1E-70 7.1E-75 556.9 36.7 322 58-385 6-329 (486)
31 3ty7_A Putative aldehyde dehyd 100.0 6.9E-71 2.4E-75 559.9 32.9 323 56-385 6-328 (478)
32 2j6l_A Aldehyde dehydrogenase 100.0 4.2E-70 1.4E-74 556.1 38.4 323 56-385 22-349 (500)
33 1euh_A NADP dependent non phos 100.0 2.5E-70 8.6E-75 555.1 35.0 319 58-385 5-329 (475)
34 1uxt_A Glyceraldehyde-3-phosph 100.0 5.1E-70 1.7E-74 555.3 34.8 321 57-385 18-343 (501)
35 3ju8_A Succinylglutamic semial 100.0 2.2E-69 7.5E-74 549.9 38.1 321 59-385 7-330 (490)
36 3ros_A NAD-dependent aldehyde 100.0 1.5E-69 5E-74 549.4 35.5 307 74-385 5-311 (484)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 1E-68 3.6E-73 550.7 35.1 324 56-385 62-395 (563)
38 4f9i_A Proline dehydrogenase/d 100.0 1.7E-67 5.8E-72 569.7 36.9 324 57-385 531-861 (1026)
39 3etf_A Putative succinate-semi 100.0 3.1E-67 1.1E-71 531.1 35.9 310 71-385 5-314 (462)
40 2y53_A Aldehyde dehydrogenase 100.0 7.2E-67 2.5E-71 536.6 31.0 319 58-385 8-345 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 6.1E-66 2.1E-70 522.8 31.1 308 70-385 3-312 (474)
42 3v4c_A Aldehyde dehydrogenase 100.0 2.3E-64 7.9E-69 517.3 31.7 315 55-384 27-363 (528)
43 3lns_A Benzaldehyde dehydrogen 100.0 2.1E-63 7.2E-68 502.1 35.8 302 73-385 6-311 (457)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 2.3E-62 7.7E-67 500.6 30.8 297 69-369 3-320 (510)
45 3haz_A Proline dehydrogenase; 100.0 3.7E-61 1.3E-65 519.2 34.2 293 89-385 544-840 (1001)
46 3sza_A Aldehyde dehydrogenase, 100.0 7.2E-61 2.5E-65 484.2 33.5 286 92-384 15-304 (469)
47 3k9d_A LMO1179 protein, aldehy 100.0 7.5E-57 2.6E-61 455.0 21.6 288 88-385 5-305 (464)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 1.7E-56 5.8E-61 451.3 18.8 278 75-363 9-305 (463)
49 3my7_A Alcohol dehydrogenase/a 100.0 1.4E-54 4.6E-59 437.2 26.1 264 89-362 1-269 (452)
50 4ghk_A Gamma-glutamyl phosphat 100.0 5.4E-54 1.9E-58 431.7 24.1 269 94-372 25-315 (444)
51 1vlu_A Gamma-glutamyl phosphat 100.0 4E-54 1.4E-58 434.6 17.6 267 96-373 15-306 (468)
52 1o20_A Gamma-glutamyl phosphat 100.0 3.2E-53 1.1E-57 424.1 23.2 265 94-368 13-296 (427)
53 4gic_A HDH, histidinol dehydro 94.8 3.1 0.0001 40.3 23.5 167 185-366 119-298 (423)
54 1kae_A HDH, histidinol dehydro 82.3 38 0.0013 32.8 21.4 167 186-366 114-292 (434)
55 3v4g_A Arginine repressor; vib 73.5 8.7 0.0003 32.7 6.9 38 221-261 115-152 (180)
56 3lap_A Arginine repressor; arg 69.8 31 0.0011 29.0 9.5 37 221-261 110-146 (170)
57 1b93_A Protein (methylglyoxal 68.6 7.1 0.00024 32.3 5.1 114 197-336 12-135 (152)
58 1vmd_A MGS, methylglyoxal synt 66.0 23 0.00079 30.0 7.9 121 190-336 20-151 (178)
59 2xw6_A MGS, methylglyoxal synt 65.2 2.3 8E-05 34.5 1.5 86 209-305 17-111 (134)
60 3fxd_A Protein ICMQ; helix bun 63.7 29 0.00099 23.3 6.3 47 92-144 5-51 (57)
61 1b4a_A Arginine repressor; hel 62.4 56 0.0019 26.7 9.5 36 222-261 90-125 (149)
62 2yvq_A Carbamoyl-phosphate syn 58.8 12 0.0004 30.5 4.7 73 223-306 50-132 (143)
63 3v42_A Folliculin; tumor suppr 56.4 12 0.00041 33.1 4.6 68 213-288 21-88 (226)
64 1b4b_A Arginine repressor; cor 50.8 31 0.0011 24.3 5.3 56 222-294 12-67 (71)
65 2zfz_A Arginine repressor; DNA 50.3 33 0.0011 24.7 5.5 36 222-261 20-55 (79)
66 2p5m_A Arginine repressor; alp 43.5 32 0.0011 25.1 4.5 36 222-261 24-59 (83)
67 1xxa_A ARGR, arginine represso 41.6 30 0.001 24.9 4.1 37 222-261 14-50 (78)
68 2ioj_A Hypothetical protein AF 37.5 32 0.0011 27.4 4.1 50 253-303 53-102 (139)
69 3pzy_A MOG; ssgcid, seattle st 32.6 28 0.00097 28.9 3.0 51 237-288 28-80 (164)
70 1y5e_A Molybdenum cofactor bio 30.0 27 0.00092 29.1 2.5 52 236-287 31-85 (169)
71 3iwt_A 178AA long hypothetical 27.2 90 0.0031 25.8 5.4 52 236-287 40-94 (178)
72 3rfq_A Pterin-4-alpha-carbinol 26.9 32 0.0011 29.3 2.4 53 236-288 49-103 (185)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=7.3e-78 Score=610.25 Aligned_cols=329 Identities=42% Similarity=0.703 Sum_probs=315.1
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
+...++||||+|+++.++++++++||.||++|++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999988899999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
+.++|++++++|+|||+.+++..|+..+++.++||+++.+++.+...+...+...++.++|+|||++|+|||||+...++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999999866799999999999999999888877766677789999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999998766
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
+..++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 55589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||||++.
T Consensus 322 ~~~~Gpli~~~ 332 (490)
T 2wme_A 322 NTNFGPLVSFP 332 (490)
T ss_dssp TCCBCCCSCHH
T ss_pred cCccCCcCCHH
Confidence 99999999853
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=7.8e-74 Score=585.04 Aligned_cols=342 Identities=37% Similarity=0.616 Sum_probs=316.5
Q ss_pred CcccccccccccccCCCCCCCcCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc--cc
Q 016216 33 ARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF--DE 110 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~ 110 (393)
.-|++.|+.+-++- .+...++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++|| +
T Consensus 15 ~~~~~~~~~~m~~~-------~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~- 86 (520)
T 3ed6_A 15 TENLYFQSNAMELL-------KHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG- 86 (520)
T ss_dssp ----CHHHHHHHHG-------GGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT-
T ss_pred CCCccccccccccc-------cccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc-
Confidence 34677666542211 1223478999999988788999999999999999999999999999999999999 7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceE
Q 016216 111 GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHI 189 (393)
Q Consensus 111 g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~ 189 (393)
.|+.++..+|.++|+++++.|+++.++|+++++.|+|||+.+++. |+..+++.++|++++++++.+...+.. .+...
T Consensus 87 -~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~ 164 (520)
T 3ed6_A 87 -EWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTES 164 (520)
T ss_dssp -TTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEE
T ss_pred -ccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcc
Confidence 999999999999999999999999999999999999999999985 999999999999999988777655543 45678
Q ss_pred EEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHH
Q 016216 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAAL 269 (393)
Q Consensus 190 ~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L 269 (393)
++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.++++.|
T Consensus 165 ~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L 244 (520)
T 3ed6_A 165 KIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVM 244 (520)
T ss_dssp EEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHH
T ss_pred cccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred HcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcC
Q 016216 270 ASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349 (393)
Q Consensus 270 ~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~ 349 (393)
+.||+||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+
T Consensus 245 ~~~p~vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~ 323 (520)
T 3ed6_A 245 SGHKEVDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQN 323 (520)
T ss_dssp HHCTTCSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEH
T ss_pred HhCCCcCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcH
Confidence 999999999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 350 ~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++||+|+++|+++++++++|||+|+++++||++++.
T Consensus 324 ~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~ 359 (520)
T 3ed6_A 324 SIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTE 359 (520)
T ss_dssp HHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHH
Confidence 999999999999999999999999999999999753
No 3
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.2e-73 Score=579.97 Aligned_cols=326 Identities=34% Similarity=0.555 Sum_probs=312.7
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKEN 87 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 445889999999887889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEE-ecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||..+++ .|+..+++.++|++++++++.+...+...+...++.+ +|+|||++|+|||||+...++
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 166 (506)
T 3rh9_A 88 REEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAK 166 (506)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHH
Confidence 99999999999999999998 5999999999999999998877666544456678889 999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 167 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~a 246 (506)
T 3rh9_A 167 KLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDT 246 (506)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 247 a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 325 (506)
T 3rh9_A 247 AE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMND 325 (506)
T ss_dssp TT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTST
T ss_pred hh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 326 ~~~~Gpli~~~ 336 (506)
T 3rh9_A 326 GIDIGPLINKQ 336 (506)
T ss_dssp TCSBCCCSCHH
T ss_pred CCcccccCCHH
Confidence 99999999853
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1e-73 Score=580.23 Aligned_cols=325 Identities=39% Similarity=0.624 Sum_probs=311.0
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|+++++.|+|||+.+++. |+..+++.++||+.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999985 999999999999999888776655533 4567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++|||+++.
T Consensus 328 ~~~Gpli~~~ 337 (484)
T 3ifg_A 328 ATLGPLINEA 337 (484)
T ss_dssp CCBCCCSSHH
T ss_pred CCCCCCcCHH
Confidence 9999999864
No 5
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.9e-73 Score=581.84 Aligned_cols=326 Identities=41% Similarity=0.769 Sum_probs=309.0
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+.|.|+.++.++|.++|+++++.|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999986667899999999999999999999999999999999999855699999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC----CCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
|++++++|+|||+.+++..|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 999999999999999874599999999999999998877665543 2233578899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.++++.|+.|++|+.|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred h-hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCC
Q 016216 295 A-KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (393)
Q Consensus 295 a-~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~ 373 (393)
+ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|
T Consensus 278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 6 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCcccccC
Q 016216 374 SGVEQGPQVLFS 385 (393)
Q Consensus 374 ~~~~~Gpli~~~ 385 (393)
+++++||||++.
T Consensus 357 ~~~~~Gpli~~~ 368 (517)
T 2o2p_A 357 RDTNHGPQNHEA 368 (517)
T ss_dssp TTCCBCCCSSHH
T ss_pred CCCccCCCcCHH
Confidence 999999999864
No 6
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.8e-73 Score=577.54 Aligned_cols=328 Identities=38% Similarity=0.573 Sum_probs=310.8
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
.+.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++.++|.++|+++++.|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987677899999999999999999999999999999999999755799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
.++|++++++|+|||+.+++..|+..+++.++|++++++++.+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999987459999999999999999888776554333446788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8889999999999999999999999999999999
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus 246 ~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 E-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp H-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred h-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 325 ~~~gpli~~~ 334 (495)
T 3b4w_A 325 AQIGPLISEK 334 (495)
T ss_dssp CCBCCCSCHH
T ss_pred CccCCCcCHH
Confidence 9999999864
No 7
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=5.8e-73 Score=576.61 Aligned_cols=326 Identities=54% Similarity=0.970 Sum_probs=309.6
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.| .|+.++.++|.++|+++++.|+++.+
T Consensus 22 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (501)
T 1bxs_A 22 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRL 101 (501)
T ss_dssp SEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999987678899999999999999999999999999999999999743 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 102 ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 181 (501)
T 1bxs_A 102 LLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181 (501)
T ss_dssp HHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHH
Confidence 99999999999999887667999999999999999988877655544455678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh-h
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-K 296 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-~ 296 (393)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++.++ +
T Consensus 182 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~ 261 (501)
T 1bxs_A 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKS 261 (501)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999988889999999999999999999999999999998 6
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 262 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (501)
T 1bxs_A 262 -NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340 (501)
T ss_dssp -TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTC
T ss_pred -cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||+|++.
T Consensus 341 ~~Gpli~~~ 349 (501)
T 1bxs_A 341 SQGPQIDKE 349 (501)
T ss_dssp CBCCCSCHH
T ss_pred ccCCCcCHH
Confidence 999999864
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.8e-73 Score=578.97 Aligned_cols=325 Identities=38% Similarity=0.640 Sum_probs=310.9
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|+++++.|+|||+.+++. |+..+++.++||+.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999885 999999999999999988776655433 3567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 348 ~~~Gpli~~~ 357 (504)
T 3ek1_A 348 VVIGPMIEEK 357 (504)
T ss_dssp CCBCCCSSHH
T ss_pred CccccccCHH
Confidence 9999999864
No 9
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=6.3e-73 Score=575.83 Aligned_cols=336 Identities=34% Similarity=0.517 Sum_probs=306.6
Q ss_pred ccCCCCCCCcC-CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 016216 45 VEEPIIPPVQI-SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSR 123 (393)
Q Consensus 45 ~~~~~~~~~~~-~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~ 123 (393)
++.++..+-.| ...++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++..+|.+
T Consensus 12 ~~~~~~~~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~ 89 (497)
T 3i44_A 12 LEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLG 89 (497)
T ss_dssp ----------CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHH
T ss_pred hhhhhcCCcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHH
Confidence 34455555554 456899999999887888999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEE-EecceeEEEE
Q 016216 124 IMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQI 202 (393)
Q Consensus 124 ~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i 202 (393)
+|+++++.|+++.++|+++++.|+|||+.+++..|+..+++.++++++..+.......+. .+...++. ++|+|||++|
T Consensus 90 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I 168 (497)
T 3i44_A 90 FVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLI 168 (497)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEE
Confidence 999999999999999999999999999999985699999999999998876654332221 13345667 9999999999
Q ss_pred CCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeC
Q 016216 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTG 282 (393)
Q Consensus 203 ~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftG 282 (393)
+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+++|.+.++++.|+.||+||.|+|||
T Consensus 169 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTG 248 (497)
T 3i44_A 169 TPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTG 248 (497)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred ChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHH
Q 016216 283 HCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR 362 (393)
Q Consensus 283 s~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~ 362 (393)
|+.+|+.|++.+++ ++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++
T Consensus 249 S~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (497)
T 3i44_A 249 STRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDI 326 (497)
T ss_dssp CHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHH
Confidence 99999999999987 8999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhcCccCCCCCCCCccCcccccC
Q 016216 363 AMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 363 ~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++++++|||+|+++++|||+++.
T Consensus 327 ~~~~~vG~p~~~~~~~Gpli~~~ 349 (497)
T 3i44_A 327 AEKTQVGPGHQTGNHIGPVVSKE 349 (497)
T ss_dssp HHHCCBCCTTSCSSCBCCCSCHH
T ss_pred HHhccCCCCCCCCCccCCCcCHH
Confidence 99999999999999999999754
No 10
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1e-72 Score=575.49 Aligned_cols=325 Identities=39% Similarity=0.688 Sum_probs=308.2
Q ss_pred CcccceeCCeeeeCCCCCe-eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 56 SYTKNLINGQFVDAASGKT-FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
...++||||+|+.+.++++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999998766788 99999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
+.++|+++++.|+|||+.+++ .|+..+++.++||+++.+++.+...+...+...++.++|+|||++|+|||||+...++
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 999999999999999999987 4999999999999999988766544433344678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+ ++++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999977 8999999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 97 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 333 ~~~~gpli~~~ 343 (503)
T 1a4s_A 333 ETRMGGLISKP 343 (503)
T ss_dssp TCCBCCCSCHH
T ss_pred CCccCCCcCHH
Confidence 99999999863
No 11
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=9.5e-73 Score=575.22 Aligned_cols=328 Identities=35% Similarity=0.550 Sum_probs=312.8
Q ss_pred cCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 54 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
..+..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34556899999999887789999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
++.++|+++++.|+|||..+++ .|+..+++.++|++.+.+++.+...+. ..+...++.++|+|||++|+|||||+...
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999999998 499999999999999998887665543 24567889999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+++|.+.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+
T Consensus 246 ~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~ 324 (497)
T 3k2w_A 246 TSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324 (497)
T ss_dssp HHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||++++.
T Consensus 325 ~~~~~~gpli~~~ 337 (497)
T 3k2w_A 325 DADSQMGPKCNQR 337 (497)
T ss_dssp STTCSBCCCSCHH
T ss_pred CCCCccccCcCHH
Confidence 9999999999853
No 12
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.6e-72 Score=574.31 Aligned_cols=329 Identities=40% Similarity=0.687 Sum_probs=310.6
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG---PWPKMTPYERSRIMLRAADL 131 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g---~W~~~~~~~R~~~L~~~a~~ 131 (393)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.| .|+.++.++|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344589999999988788999999999999999999999999999999999999743 79999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccc-c---CCCCceEEEEEecceeEEEECCCCc
Q 016216 132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-P---GDGNYHIQTLHEPIGVAGQIVPWNF 207 (393)
Q Consensus 132 l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~---~~~~~~~~~~~~P~Gvv~~i~p~N~ 207 (393)
|+++.++|+++++.|+|||+.+++. |+..+++.++|++.+++++.+... + ...+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 9999999999999999999999975 999999999999999988765431 1 1235678899999999999999999
Q ss_pred cHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHH
Q 016216 208 PLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287 (393)
Q Consensus 208 P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 287 (393)
|+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCc
Q 016216 288 KIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 367 (393)
Q Consensus 288 ~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 367 (393)
+.|++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999987 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCcccccC
Q 016216 368 VGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 368 ~G~p~~~~~~~Gpli~~~ 385 (393)
+|||+++++++|||+++.
T Consensus 323 ~g~p~~~~~~~gpli~~~ 340 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEG 340 (503)
T ss_dssp BSCTTSTTCCBCCCSCHH
T ss_pred CCCCCCCCCcccCccCHH
Confidence 999999999999999853
No 13
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-72 Score=576.73 Aligned_cols=325 Identities=41% Similarity=0.661 Sum_probs=311.5
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAF--DEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
..++||||+|+.+.++++++++||.| |+++++++.++.+|+++++++|++|| . .|+.++.++|.++|+++++.|+
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLIL 99 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 45799999999887889999999999 99999999999999999999999999 6 8999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
++.++|+++++.|+|||..+++ .|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 100 ARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 9999999999999999999995 6999999999999999988877666544 4667889999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 259 ~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 337 (528)
T 3u4j_A 259 IAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337 (528)
T ss_dssp HHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTT
T ss_pred HHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||++++.
T Consensus 338 ~~~~~~Gpli~~~ 350 (528)
T 3u4j_A 338 NERTKIGAMISEA 350 (528)
T ss_dssp STTCSBCCCSCHH
T ss_pred CcCCccCCccCHH
Confidence 9999999999864
No 14
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=7.6e-73 Score=575.61 Aligned_cols=326 Identities=61% Similarity=1.017 Sum_probs=308.9
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.| .|+.++.++|.++|+++++.|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987678899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|+++++.|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987667999999999999999988776655544455678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh-h
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-K 296 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-~ 296 (393)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999977889999999999999999999999999999998 6
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||||++.
T Consensus 340 ~~Gpli~~~ 348 (500)
T 1o04_A 340 EQGPQVDET 348 (500)
T ss_dssp SBCCCSSHH
T ss_pred ccCcccCHH
Confidence 999999864
No 15
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.1e-72 Score=574.27 Aligned_cols=325 Identities=38% Similarity=0.605 Sum_probs=308.7
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++ +++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 100 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE 100 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 34589999999987666 999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||..++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 999999999999999999933699999999999999998877665542 2456788999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 259 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA 259 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998888999999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 260 a~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 260 AK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred Hh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 97 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 339 ~~~~Gpli~~~ 349 (498)
T 4f3x_A 339 ENEIGPLISRR 349 (498)
T ss_dssp GCSSCCCSCHH
T ss_pred cCccccCcCHH
Confidence 99999999753
No 16
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-72 Score=574.42 Aligned_cols=324 Identities=41% Similarity=0.690 Sum_probs=309.3
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3679999999876788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|+++++.|+|||+.+++ .|+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999998 699999999999999998877765553 345567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999999997
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||+|++.
T Consensus 343 ~~gpli~~~ 351 (515)
T 2d4e_A 343 EVGPLIHPE 351 (515)
T ss_dssp SBCCCSCHH
T ss_pred ccCCCcCHH
Confidence 999999863
No 17
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.6e-72 Score=575.08 Aligned_cols=322 Identities=38% Similarity=0.660 Sum_probs=308.5
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999887889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhH----hcCccccCCCCceEEEEEecceeEEEECCCCccHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
.++|+++++.|+|||..++ |+..+++.++|++++.++ +.+...+...+. .++.++|+|||++|+|||||+..
T Consensus 91 ~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999887 899999999999999988 666665544455 88999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+++| +.+.++.|+.||+||.|+||||+.+|+.|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 245 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||
T Consensus 246 ~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 324 (517)
T 3r31_A 246 AAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP 324 (517)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
+|+++++||++++.
T Consensus 325 ~~~~~~~Gpli~~~ 338 (517)
T 3r31_A 325 LDYATHLGPLVSKA 338 (517)
T ss_dssp TSTTCSBCCBSCHH
T ss_pred CCcCCcccCCcCHH
Confidence 99999999999863
No 18
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=7.6e-72 Score=572.54 Aligned_cols=323 Identities=32% Similarity=0.526 Sum_probs=308.8
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 678999999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHh-hhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW-ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||+.+++. |+..+++.++||+++ .+...+...+...+...++.++|+|||++|+|||||+...++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999999 566666666544567789999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..|.+++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhcC------CccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 295 AKSN------LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 295 a~~~------~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
++ + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 6 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCcccccC
Q 016216 369 GDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 369 G~p~~~~~~~Gpli~~~ 385 (393)
|||+|+++++||++++.
T Consensus 351 G~p~~~~~~~Gpli~~~ 367 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEK 367 (538)
T ss_dssp SCTTSTTCSBCCCSCHH
T ss_pred CCCCCCCCCCcCccCHH
Confidence 99999999999999864
No 19
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.7e-72 Score=572.02 Aligned_cols=326 Identities=29% Similarity=0.446 Sum_probs=308.2
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999887789999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (393)
+.++|+++++.|+|||..+++. |+..+++.++||+++.+.+.+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999984 99999999999999887776654432 235568889999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 214 ~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|+ .+.++.|+.|++||.|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999994 5567999999999999999999999999999
Q ss_pred HhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCc-cHHHHHHHHHHHHhcCccCCCC
Q 016216 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 294 ~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|||+
T Consensus 260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 987 89999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||++++.
T Consensus 339 ~~~~~~gpli~~~ 351 (521)
T 4e4g_A 339 DEKADMGPVVTKE 351 (521)
T ss_dssp CTTCSBCCCSCHH
T ss_pred CccCccCCCCCHH
Confidence 9999999999853
No 20
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.9e-72 Score=568.85 Aligned_cols=328 Identities=41% Similarity=0.704 Sum_probs=313.2
Q ss_pred cCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 54 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
++...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 80 (490)
T 2ve5_A 3 RFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILR 80 (490)
T ss_dssp CSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred ccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 44556899999999887889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (393)
++.++|+++++.|+|||..+++..|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...+
T Consensus 81 ~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 160 (490)
T 2ve5_A 81 ERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHHH
Confidence 99999999999999999999985599999999999999998877665554456678899999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 214 ~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
+++++||++||+||+|||+.+|+++..|.+++.++|+|+|+||+++|.+.+.++.|+.||+||.|+||||+.+|+.|++.
T Consensus 161 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~ 240 (490)
T 2ve5_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMAS 240 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred H-hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 294 A-AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 294 ~-a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
+ ++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 241 a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 319 (490)
T 2ve5_A 241 ASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319 (490)
T ss_dssp HHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred chhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9 76 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCccccc
Q 016216 373 KSGVEQGPQVLF 384 (393)
Q Consensus 373 ~~~~~~Gpli~~ 384 (393)
|+++++||++++
T Consensus 320 d~~~~~gpli~~ 331 (490)
T 2ve5_A 320 DENTNFGPLVSF 331 (490)
T ss_dssp STTCCBCCCSCH
T ss_pred CCCCccCCCCCH
Confidence 999999999975
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=7.9e-72 Score=567.51 Aligned_cols=323 Identities=39% Similarity=0.671 Sum_probs=306.1
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 24 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 24 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997655 8999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|+++++.|+|||..+++..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 99999999999999998754999999999999999888766554432 34467889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.++++.|++|++||.|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999778889999999999999999999999999999997
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 260 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 338 (495)
T 1wnd_A 260 -SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 338 (495)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred -cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++|||+++.
T Consensus 339 ~~Gpli~~~ 347 (495)
T 1wnd_A 339 ELGPLSSLA 347 (495)
T ss_dssp CBCCCSCHH
T ss_pred CccCCCCHH
Confidence 999999863
No 22
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=8.7e-72 Score=566.35 Aligned_cols=325 Identities=35% Similarity=0.567 Sum_probs=308.4
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999876778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|++++++|+|||+.+++ .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999987 5999999999999998887766654432 3456788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|++.++++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCC-C
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK-S 374 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~-~ 374 (393)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++|||+++.
T Consensus 322 ~~~~gpli~~~ 332 (479)
T 2imp_A 322 DIAMGPLINAA 332 (479)
T ss_dssp SCSBCCCSSHH
T ss_pred CCccCCCcCHH
Confidence 99999999863
No 23
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.3e-71 Score=565.36 Aligned_cols=325 Identities=38% Similarity=0.658 Sum_probs=310.2
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|+++++.|+|||..+++. |+..+++.++|++.+..+..+...+. ..+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999985 99999999999999988776655543 24567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 325 ~~~gpli~~~ 334 (481)
T 3jz4_A 325 VTIGPLIDEK 334 (481)
T ss_dssp CCBCCCSCHH
T ss_pred CccccccCHH
Confidence 9999999864
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.2e-71 Score=567.56 Aligned_cols=322 Identities=31% Similarity=0.485 Sum_probs=306.1
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|+++.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887789999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC--C----CceEEEEEecceeEEEECCCCccHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--G----NYHIQTLHEPIGVAGQIVPWNFPLL 210 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~N~P~~ 210 (393)
++|+++++.|+|||..+++. |+..+++.++|++++.+++.+...+.. . +...++.++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999985 999999999999999988776544322 1 4567889999999999999999999
Q ss_pred HHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHH
Q 016216 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290 (393)
Q Consensus 211 ~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 290 (393)
..++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCC
Q 016216 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 291 ~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~ 370 (393)
++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCcccccC
Q 016216 371 PFKSGVEQGPQVLFS 385 (393)
Q Consensus 371 p~~~~~~~Gpli~~~ 385 (393)
|+ +++++||++++.
T Consensus 325 p~-~~~~~gpli~~~ 338 (505)
T 3prl_A 325 PE-DDADITPVIDEK 338 (505)
T ss_dssp TT-TTCSBCCCSCHH
T ss_pred CC-CcCcCCcccCHH
Confidence 99 999999999863
No 25
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.7e-71 Score=563.27 Aligned_cols=322 Identities=36% Similarity=0.581 Sum_probs=306.0
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+. ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999653 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|+++++.|+|||..+++. |+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999985 99999999999999998877665443 235567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVS---GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++ |.+.++++.|++|++||.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8677889999999999999999999999999999
Q ss_pred HhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc-CccCCCC
Q 016216 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPF 372 (393)
Q Consensus 294 ~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~G~p~ 372 (393)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++ +++|||+
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 997 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
++++++|||+++.
T Consensus 327 ~~~~~~gpli~~~ 339 (487)
T 2w8n_A 327 EEGTTQGPLINEK 339 (487)
T ss_dssp STTCCBCCCSSHH
T ss_pred cccCcccCCCCHH
Confidence 9999999999863
No 26
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7e-71 Score=560.77 Aligned_cols=325 Identities=31% Similarity=0.509 Sum_probs=306.5
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC--CCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
++|+++++.|+|||+.+++. |+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999986 999999999999999988776655432 346788999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
++++||++||+||+|||+.+|+++ ..+.+++.++|+|+|+||+++|++.+.++.|+.||+||.|+||||+.+|+.|++.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~ 242 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI 242 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999887899999999999999999999999999999
Q ss_pred HhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCC
Q 016216 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (393)
Q Consensus 294 ~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~ 373 (393)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.|
T Consensus 243 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~ 321 (485)
T 4dng_A 243 AGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321 (485)
T ss_dssp HHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred Hhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 987 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCcccccC
Q 016216 374 SGVEQGPQVLFS 385 (393)
Q Consensus 374 ~~~~~Gpli~~~ 385 (393)
+++++||++++.
T Consensus 322 ~~~~~gpli~~~ 333 (485)
T 4dng_A 322 PKTVVGPLINER 333 (485)
T ss_dssp TTCSBCCCSSHH
T ss_pred CCCccCCCCCHH
Confidence 999999999853
No 27
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.1e-70 Score=562.43 Aligned_cols=322 Identities=31% Similarity=0.508 Sum_probs=304.0
Q ss_pred ccceeCCeeeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+. ++++++++||. ||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 36899999995 36799999999 6999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc--CCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
++|+++++.|+|||+.+++ .|+..+++.++||+++++++.+...+ ...+...++.++|+|||++|+|||||+...++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999998 59999999999999999888775532 22345678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997788999999999999999999999999999998
Q ss_pred hh-----cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccC
Q 016216 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (393)
Q Consensus 295 a~-----~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G 369 (393)
+. .++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 81 2789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCcccccC
Q 016216 370 DPFKSGVEQGPQVLFS 385 (393)
Q Consensus 370 ~p~~~~~~~Gpli~~~ 385 (393)
|| ++++++|||+++.
T Consensus 353 ~p-~~~~~~Gpli~~~ 367 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAE 367 (516)
T ss_dssp CG-GGCCSBCCCSCHH
T ss_pred CC-ccccccCCCCCHH
Confidence 99 9999999999863
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=9.7e-71 Score=558.32 Aligned_cols=316 Identities=31% Similarity=0.512 Sum_probs=295.7
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l 139 (393)
+||||+|+.+ ++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 56 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHH
Q 016216 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA 219 (393)
Q Consensus 140 ~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~A 219 (393)
+++++.|+|||..+++. |+..+++.++|++++++++.+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999984 999999999999999988876665543 5678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 220 LTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 220 LaaGN~VIlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
|++||+||+|||+.+|+++..+++++.++ |+|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999998876
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++|||+++.
T Consensus 312 ~~~gpli~~~ 321 (486)
T 3pqa_A 312 TDVGPLISVE 321 (486)
T ss_dssp CSBCCCSCHH
T ss_pred CCcCCCCCHH
Confidence 9999999853
No 29
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.6e-70 Score=560.16 Aligned_cols=327 Identities=36% Similarity=0.562 Sum_probs=309.3
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEE 87 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 3445799999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC--CCceEEEEEecceeEEEECCCCccHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
+.++|+++++.|+|||..+++. |+..+++.++|++.+.++..+ ..+.. .+...++.++|+|||++|+|||||+...
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 88 HREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp THHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 9999999999999999999986 999999999999998887666 44432 3567889999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
++++++||++||+||+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.+.++.|+.|++||.|+||||+.+|+.|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhc-CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCC
Q 016216 292 ELAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 292 ~~~a~~-~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~ 370 (393)
+.+++. ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 325 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 988742 5799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCcccccC
Q 016216 371 PFKSGVEQGPQVLFS 385 (393)
Q Consensus 371 p~~~~~~~Gpli~~~ 385 (393)
|.++++++||++++.
T Consensus 326 p~~~~~~~gpli~~~ 340 (508)
T 3r64_A 326 PSAEGTLVGPVINDS 340 (508)
T ss_dssp TTSSSCCBCCCSCHH
T ss_pred CccCCCcccCCCCHH
Confidence 999999999999863
No 30
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.1e-70 Score=556.88 Aligned_cols=322 Identities=33% Similarity=0.500 Sum_probs=304.4
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999876778999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc-CCCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|++++++|+|||+.+++ .|+..+++.++|++.+.+.+.+...+ ...+...++.++|+|||++|+|||||+...++++
T Consensus 84 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 84 ELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 999999999999999987 59999999999999877776665433 1234567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|+.|++||.|+||||+.+|+.|++.+++
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~ 241 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999 56789999999999999999999999999999987
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCce-EEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR-TYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| +|||++ ||+|+++|+++++++++|||++++
T Consensus 242 -~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~ 319 (486)
T 1t90_A 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG 319 (486)
T ss_dssp -TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred -cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence 88999999999999999999999999999999999999999999999 999999 999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||+|++.
T Consensus 320 ~~~gpli~~~ 329 (486)
T 1t90_A 320 VFLGPVIRED 329 (486)
T ss_dssp CCBCCCSCHH
T ss_pred CccCCCCCHH
Confidence 9999999864
No 31
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6.9e-71 Score=559.89 Aligned_cols=323 Identities=34% Similarity=0.547 Sum_probs=306.0
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 356899999999988889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
.++|+++++.|+|||..+++..|+..+++.++|+++..+++.+... ....++.++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999999556999999999999999888765432 234788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 319 ~~~gpli~~~ 328 (478)
T 3ty7_A 319 TQVGPIISKK 328 (478)
T ss_dssp CCBCCCSCHH
T ss_pred CccCCCcCHH
Confidence 9999999753
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=4.2e-70 Score=556.13 Aligned_cols=323 Identities=30% Similarity=0.516 Sum_probs=303.5
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++.||||+|+. ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 3468899999994 678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||+.+++ .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999986 5999999999999998887766654432 344567889999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 290 (393)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+++| +.++++.|..|++||.|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999988876 46999999999999 78899999999999999999999999999
Q ss_pred HHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCC
Q 016216 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 291 ~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~ 370 (393)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999997 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCcccccC
Q 016216 371 PFKSGVEQGPQVLFS 385 (393)
Q Consensus 371 p~~~~~~~Gpli~~~ 385 (393)
|.++++++|||+++.
T Consensus 335 p~~~~~~~gpli~~~ 349 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQ 349 (500)
T ss_dssp TTSTTCCBCCCSCHH
T ss_pred cccCCCccccCCCHH
Confidence 999999999999863
No 33
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.5e-70 Score=555.09 Aligned_cols=319 Identities=30% Similarity=0.523 Sum_probs=300.8
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.+ +++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 80 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKE 80 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999997533 999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CC----ceE-EEEEecceeEEEECCCCccHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GN----YHI-QTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
+|+++++.|+|||+.+++ .|+..+++.++|++++.+++.+...+.. .+ ... ++.++|+|||++|+|||||+..
T Consensus 81 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (475)
T 1euh_A 81 KIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159 (475)
T ss_dssp HHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence 999999999999999987 5999999999999999887766543322 23 355 8899999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
+| ++++|||+++.
T Consensus 317 ~~-~~~~gpli~~~ 329 (475)
T 1euh_A 317 ED-DADITPLIDTK 329 (475)
T ss_dssp GG-TCSBCCCSCHH
T ss_pred cc-cCccCCCCCHH
Confidence 99 99999999863
No 34
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=5.1e-70 Score=555.32 Aligned_cols=321 Identities=28% Similarity=0.421 Sum_probs=302.6
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+. ++++++||.||+++++++.++.+|+++++++|++||+. .|+.++.++|.++|+++++.|+++.
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 34689999999753 78999999999999999999999999999999999862 4999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC---CC--CceEEEEEecceeEEEECCCCccHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG---DG--NYHIQTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
++|+++++.|+|||..+++ .|+..+++.++||+++++++.+...+. .. +...++.++|+|||++|+|||||+..
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999998 599999999999999998876665443 22 34678999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+ ++++.|+.|++||.|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
+|+++++|||+++.
T Consensus 330 ~~~~~~~Gpli~~~ 343 (501)
T 1uxt_A 330 RDPTVDVGPLISPS 343 (501)
T ss_dssp TSTTCSBCCCSCHH
T ss_pred cccCCcccCCCCHH
Confidence 99999999999863
No 35
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-69 Score=549.89 Aligned_cols=321 Identities=31% Similarity=0.434 Sum_probs=303.4
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+ ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999975 457899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|+++++.|+|||+.+++ .|+..+++.++|++...+++.+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999998 59999999999999998887766544223445667799999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.++.|+.|++||.|+||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67889999999999999999999999999999887 8
Q ss_pred CccE-EEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCcc-HHHHHHHHHHHHhcCccCC-CCCCC
Q 016216 299 LKPV-TLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGD-PFKSG 375 (393)
Q Consensus 299 ~~pv-~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~G~-p~~~~ 375 (393)
++|+ ++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++ ||+|+++|+++++++++|| |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 321 ~~~Gpli~~~ 330 (490)
T 3ju8_A 321 PFMGAVISLS 330 (490)
T ss_dssp CSBCCCSCHH
T ss_pred CccccccCHH
Confidence 9999999853
No 36
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.5e-69 Score=549.43 Aligned_cols=307 Identities=29% Similarity=0.427 Sum_probs=295.7
Q ss_pred eeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhh
Q 016216 74 TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQ 153 (393)
Q Consensus 74 ~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 153 (393)
+++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCC
Q 016216 154 SLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233 (393)
Q Consensus 154 a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~ 233 (393)
++ .|+..+++.++|+++.++++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 59999999999999999988777655445667899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
+|+++..|.+++.++|+|+|++|+++|.+.+.++ |+.|++||.|+||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998888888 9999999999999999999999999998 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++++|||+++.
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~ 311 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEK 311 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999853
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1e-68 Score=550.67 Aligned_cols=324 Identities=25% Similarity=0.328 Sum_probs=301.6
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
...++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 35689999999974 34778999998 899999999999999999999999999 99999999999999999999999
Q ss_pred c-HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 135 N-MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 135 ~-~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
+ +++|+.++++|+|||+.+++.+++..+++.++|++.+++++.+..... ..+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 999999999999999999986459999999999999998887654322 22344566777889999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
.++++||| +||+||+|||+.+|+++..+++++.++|+|+|+||+++|++.++++.|+.|++|++|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCcc------EEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcC
Q 016216 293 LAAKSNLKP------VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366 (393)
Q Consensus 293 ~~a~~~~~p------v~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~ 366 (393)
.+++ ++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9997 7774 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCccCcccccC
Q 016216 367 IVGDP-FKSGVEQGPQVLFS 385 (393)
Q Consensus 367 ~~G~p-~~~~~~~Gpli~~~ 385 (393)
++||| +|+++++||+|++.
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~ 395 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAK 395 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHH
T ss_pred cCCCcccCcCCccCCCcCHH
Confidence 99999 99999999999853
No 38
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.7e-67 Score=569.69 Aligned_cols=324 Identities=33% Similarity=0.508 Sum_probs=307.9
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 478999999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+.+++.|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..++..++|+|||++|+|||||+...++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999985 99999999999999998887654432 3466788899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..++++++++|+|+|+||+++|.+.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred hh-----cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccC
Q 016216 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (393)
Q Consensus 295 a~-----~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G 369 (393)
+. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 83 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCcccccC
Q 016216 370 DPFKSGVEQGPQVLFS 385 (393)
Q Consensus 370 ~p~~~~~~~Gpli~~~ 385 (393)
||.|+++++||+|++.
T Consensus 846 ~p~d~~t~~Gpvi~~~ 861 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDK 861 (1026)
T ss_dssp CTTSTTCSBCCCSSHH
T ss_pred CcccccCccccccCHH
Confidence 9999999999999864
No 39
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=3.1e-67 Score=531.11 Aligned_cols=310 Identities=28% Similarity=0.435 Sum_probs=294.4
Q ss_pred CCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC
Q 016216 71 SGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 150 (393)
Q Consensus 71 ~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 150 (393)
+..+++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457799999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEec
Q 016216 151 YVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230 (393)
Q Consensus 151 ~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKp 230 (393)
..+++. |+..+++.++|++++.+++.+.......+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999984 9999999999999999887766532233556888999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCC
Q 016216 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310 (393)
Q Consensus 231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 310 (393)
|+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.|++|+.|+||||+.+|+.|++.+++ ++||+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 56778899999999999999999999999999998 8899999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 311 ~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|||.++++++||+++..
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~ 314 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFD 314 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999863
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=7.2e-67 Score=536.59 Aligned_cols=319 Identities=25% Similarity=0.332 Sum_probs=290.5
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+.+.+ .+++++||.||+++++++.++ +|+++|+++|++| |+ .|+.++.++|.++|+++++.|+++.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 47899999997544 589999999999999999987 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCc-------cccCC--CCceEEEEEecc-eeEEEECCCC
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-------TVPGD--GNYHIQTLHEPI-GVAGQIVPWN 206 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-Gvv~~i~p~N 206 (393)
++|++++++|+|||+.++.. |+..+++.++||+.+.+++.+. ..+.. .....+..++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999874 9999999999999988776432 11221 222457889997 9999999999
Q ss_pred ccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcC-CCcCEEEEeCCh
Q 016216 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASH-MDVDKLSFTGHC 284 (393)
Q Consensus 207 ~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~-~~v~~V~ftGs~ 284 (393)
||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|+||+++|.+.+ +..+ +.+|.|+||||+
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS~ 238 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGSA 238 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESCH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECCH
Confidence 9999999999999999999999999999999999999999999 899999999996544 3333 579999999999
Q ss_pred HHHHHHHHHHh-hcCCccEEEecCCCCeEEEcCCC-----CHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHH
Q 016216 285 DTGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358 (393)
Q Consensus 285 ~~g~~i~~~~a-~~~~~pv~lelgG~~~~iV~~dA-----Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 358 (393)
.+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998864 23889999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhcCccCCCCCCCCccCcccccC
Q 016216 359 AKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 359 L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+++++++++|||+|+++++|||+++.
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~ 345 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSRE 345 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHH
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHH
Confidence 999999999999999999999999863
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=6.1e-66 Score=522.83 Aligned_cols=308 Identities=27% Similarity=0.381 Sum_probs=287.4
Q ss_pred CCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCC
Q 016216 70 ASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGK 149 (393)
Q Consensus 70 ~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 149 (393)
...++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++|+++|+++++.|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc--CCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEE
Q 016216 150 PYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227 (393)
Q Consensus 150 ~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VI 227 (393)
+... . .|+...++.+++|+....++...... ...+...+..++|+|||++|+|||||+...++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8644 3 49999999999999888776544322 223455677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecC
Q 016216 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG 307 (393)
Q Consensus 228 lKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelg 307 (393)
+|||+.+|+++..+.+++.++|+|+|++++++| +.+.+..|..| ++.|.||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 56788889876 8999999999999999999998 8899999999
Q ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 308 GKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 308 G~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||.++++++||++++.
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 312 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEK 312 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999863
No 42
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.3e-64 Score=517.34 Aligned_cols=315 Identities=25% Similarity=0.319 Sum_probs=286.3
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIA-NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
....++||||+|+.+.+ ++||.||++++ +++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34468999999997532 99999999998 9999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHh--cCccc----cC---CCCceEEEEEecceeEEEECC
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI--HGLTV----PG---DGNYHIQTLHEPIGVAGQIVP 204 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~Gvv~~i~p 204 (393)
++.++|+++++.|+|||+.+++ .|+..+++.++||++..++. .+... +. ..+...++.++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 9999999999999999999987 49999999999999998872 22221 11 122346889999999999999
Q ss_pred CCccHHHHH--HHHHHHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEE
Q 016216 205 WNFPLLLFT--WKVAPALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278 (393)
Q Consensus 205 ~N~P~~~~~--~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V 278 (393)
||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|+||+++|.+.++++.|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 99999999999999999999999999999875 468999999999999888899999999999999
Q ss_pred EEeCChHHHHHHHHHHhhcCC--ccEEEecCCCCeEEEcCCC---CHHHHHHHHHHHHHhccCCCccCCceEEEcCc-cH
Q 016216 279 SFTGHCDTGKIVQELAAKSNL--KPVTLELGGKSPFIIFDDA---DVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VY 352 (393)
Q Consensus 279 ~ftGs~~~g~~i~~~~a~~~~--~pv~lelgG~~~~iV~~dA---Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 352 (393)
+||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||++ +|
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999997 88 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 353 d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|+|+++|++++++++.| +.+||++++
T Consensus 338 d~f~~~l~~~~~~~~~~------~~~gp~~~~ 363 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAPQ------TMLTDGIAK 363 (528)
T ss_dssp HHHHHHHHHHHHTCCCE------ECSCHHHHH
T ss_pred HHHHHHHHHHHHhcccC------CCCCHHHHH
Confidence 99999999999998754 568888763
No 43
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.1e-63 Score=502.06 Aligned_cols=302 Identities=28% Similarity=0.371 Sum_probs=267.4
Q ss_pred CeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh
Q 016216 73 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152 (393)
Q Consensus 73 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 152 (393)
..+++.||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4588999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHHHHHhhhHhcCcc-ccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEE
Q 016216 153 QSLKSEVPMVVRLLHYYAGWADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL 228 (393)
Q Consensus 153 ~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIl 228 (393)
+++..|+..+++.++|+++..+++.... .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9885699999999999999888765432 221 124567889999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCC
Q 016216 229 KSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308 (393)
Q Consensus 229 Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG 308 (393)
|||+.+|+++..+++++.++ +|+|+||+++| +.+.++.|+. ++||.|+||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 6788899998 799999999999999999999987 89999999999
Q ss_pred CCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 309 ~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++ |.++ ++||++++.
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~ 311 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTER 311 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999988 7776 899998753
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.3e-62 Score=500.60 Aligned_cols=297 Identities=20% Similarity=0.295 Sum_probs=272.8
Q ss_pred CCCCCeeeeecCCCCceE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc
Q 016216 69 AASGKTFPVYDPRTAEVI-ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN 147 (393)
Q Consensus 69 ~~~~~~~~~~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 147 (393)
+.++++++++||.||+++ ++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 346788999999999999 79999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcchHHHHHHHHHHHHhhhH--hcCccc----cC--CCC-ceEEEEEecceeEEEECCCCccHHHH--HHHH
Q 016216 148 GKPYVQSLKSEVPMVVRLLHYYAGWADK--IHGLTV----PG--DGN-YHIQTLHEPIGVAGQIVPWNFPLLLF--TWKV 216 (393)
Q Consensus 148 Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~Gvv~~i~p~N~P~~~~--~~~l 216 (393)
|||+.++. .|+..+++.++||++.+++ ..+... +. ..+ ...++.++|+|||++|+|||||+... .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998886 4999999999999998876 333322 11 111 13578999999999999999999985 4999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977889999999999999999999999999999
Q ss_pred HHhhcCC--ccEEEecCCCCeEEEcCCCCHH--HHHHHHHHHHHhccCCCccCCceEEEcCc-cHHHHHHHHHHHHhcCc
Q 016216 293 LAAKSNL--KPVTLELGGKSPFIIFDDADVD--QAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRI 367 (393)
Q Consensus 293 ~~a~~~~--~pv~lelgG~~~~iV~~dADld--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~ 367 (393)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|+|||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9987 65 9999999999999999999999 99999999999999999999999999999 99999999999999988
Q ss_pred cC
Q 016216 368 VG 369 (393)
Q Consensus 368 ~G 369 (393)
+|
T Consensus 319 ~g 320 (510)
T 1ez0_A 319 PS 320 (510)
T ss_dssp CB
T ss_pred CC
Confidence 65
No 45
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=3.7e-61 Score=519.21 Aligned_cols=293 Identities=31% Similarity=0.466 Sum_probs=279.5
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHH
Q 016216 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY 168 (393)
Q Consensus 89 v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~ 168 (393)
++.++.+|+++|+++|++||. .|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 789999999999999999999 999999999999999999999999999999999999999999974 99999999999
Q ss_pred HHHhhhHhcCcc--ccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 016216 169 YAGWADKIHGLT--VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246 (393)
Q Consensus 169 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~ 246 (393)
|+...++..+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998877653 344456778899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc--CCccEEEecCCCCeEEEcCCCCHHHHH
Q 016216 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS--NLKPVTLELGGKSPFIIFDDADVDQAV 324 (393)
Q Consensus 247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~--~~~pv~lelgG~~~~iV~~dADld~a~ 324 (393)
++|+|+|+||+++|.+.+ ++.|+.||+|+.|+||||+++|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 325 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||.++++++||+|++.
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~ 840 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVE 840 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHH
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999864
No 46
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=7.2e-61 Score=484.24 Aligned_cols=286 Identities=27% Similarity=0.338 Sum_probs=261.4
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHH
Q 016216 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171 (393)
Q Consensus 92 ~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 171 (393)
.+.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++..|+..+++.+++++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999 999999999999999999999999999999999999999999876799999999998887
Q ss_pred hhhHhcCccc----cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 016216 172 WADKIHGLTV----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE 247 (393)
Q Consensus 172 ~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~ 247 (393)
...++..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 7655433211 111234678899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHH
Q 016216 248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA 327 (393)
Q Consensus 248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i 327 (393)
+ +|+|++|+++|.+ +.+..|+.| +||.|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 455677777 89999999999999999999997 899999999999999999999999999999
Q ss_pred HHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 328 HFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 328 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
++++|.|+||.|++++|+|||+++||+|+++|+++++++ +|+|.++++++||++++
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~ 304 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISA 304 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCH
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCH
Confidence 999999999999999999999999999999999999998 69999999999999986
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=7.5e-57 Score=455.03 Aligned_cols=288 Identities=17% Similarity=0.217 Sum_probs=249.7
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHH
Q 016216 88 NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH 167 (393)
Q Consensus 88 ~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~ 167 (393)
.++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+||+..+++..+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3456678999999999999999 99999999999999999999999999999999999999988765444444444444
Q ss_pred HHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHH----
Q 016216 168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK---- 243 (393)
Q Consensus 168 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~---- 243 (393)
++....+ ..+ ..+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332211 111 1222345567889999999999999999999999999999999999999999999999998655
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecC-CCCeEEEcCCCCHHH
Q 016216 244 LFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG-GKSPFIIFDDADVDQ 322 (393)
Q Consensus 244 ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelg-G~~~~iV~~dADld~ 322 (393)
++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+.+ .+.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999988889999999999999999999974 455555 88999 7888 999999999999999
Q ss_pred HHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHH-------hcCccCCCC-CCCCccCcccccC
Q 016216 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA-------MRRIVGDPF-KSGVEQGPQVLFS 385 (393)
Q Consensus 323 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~-------~~~~~G~p~-~~~~~~Gpli~~~ 385 (393)
|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +++++|+|. ++++++||+++.+
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~ 305 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGK 305 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTC
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHH
Confidence 99999999999999999999999999999999999999985 467889998 7789999999654
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-56 Score=451.35 Aligned_cols=278 Identities=18% Similarity=0.160 Sum_probs=229.5
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc-------
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN------- 147 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------- 147 (393)
--++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+
T Consensus 9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~ 86 (463)
T 2h5g_A 9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRL 86 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTS
T ss_pred CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccC
Confidence 34789999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCChh----hhhhcchHHHHHHHHHHHHhhhHhcCccccCC---CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHh
Q 016216 148 GKPYV----QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220 (393)
Q Consensus 148 Gk~~~----~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~AL 220 (393)
|||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+||| |.... +++++||
T Consensus 87 Gk~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL 163 (463)
T 2h5g_A 87 AAPLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI 163 (463)
T ss_dssp CHHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred CCchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence 79987 355 5999999999999998877776654321 3445788999999999999887 77777 8999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 221 TCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 221 aaGN~VIlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||+||+|||+.+|+++..|++++.++ | |+|+||+++| +.++++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa- 240 (463)
T 2h5g_A 164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK- 240 (463)
T ss_dssp HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence 9999999999999999999999999999 9 9999999999 6778999999999999999999999999999876
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHH-HHHHHHHHHH
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD-EFVEKAKARA 363 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d-~f~~~L~~~~ 363 (393)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++|| .+++++.+.+
T Consensus 241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~ 305 (463)
T 2h5g_A 241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML 305 (463)
T ss_dssp --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence 799999999999999999999999999999999999 999999999999999997 4566665554
No 49
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.4e-54 Score=437.19 Aligned_cols=264 Identities=22% Similarity=0.279 Sum_probs=229.8
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHH-H
Q 016216 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLL-H 167 (393)
Q Consensus 89 v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l-~ 167 (393)
++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.++++.++|+++++.|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 9999999999999999999999999999999999999999988755666667666 3
Q ss_pred HHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016216 168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH- 246 (393)
Q Consensus 168 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~- 246 (393)
++.. .+..+ ..+.+.+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3332 11111 1222334456889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHH
Q 016216 247 ---EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323 (393)
Q Consensus 247 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a 323 (393)
++|+|+|+||+++|.+.+.++.|+.||+|+.|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998644 4444 78999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHH
Q 016216 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR 362 (393)
Q Consensus 324 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~ 362 (393)
++.+++++|+|+||.|++++++|||+++||+|+++|+++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999874
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=5.4e-54 Score=431.68 Aligned_cols=269 Identities=20% Similarity=0.187 Sum_probs=233.4
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhhh-------cchHHH
Q 016216 94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSLK-------SEVPMV 162 (393)
Q Consensus 94 ~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~Ev~~~ 162 (393)
.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|+++++.|+||+.. +++. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 99999999999999999999999999999999999999853 4432 378899
Q ss_pred HHHHHHHHHhhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHH
Q 016216 163 VRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239 (393)
Q Consensus 163 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~ 239 (393)
++.+++++.+.+.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887542 333332 23556788999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE
Q 016216 240 YVAKLF----HEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314 (393)
Q Consensus 240 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV 314 (393)
.+.+++ .++|+|+|+||+++|.+. +.++.|..|++||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998554 5788888999999999999999999998764 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc---CCCC
Q 016216 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPF 372 (393)
Q Consensus 315 ~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---G~p~ 372 (393)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++ |||.
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~ 315 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD 315 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH
Confidence 9999999999999999999999 9999999999999999999999999999998 8874
No 51
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4e-54 Score=434.58 Aligned_cols=267 Identities=16% Similarity=0.177 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhhcchHH-HHHHHHHHH
Q 016216 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLKSEVPM-VVRLLHYYA 170 (393)
Q Consensus 96 ~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~Ev~~-~~~~l~~~a 170 (393)
.+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||. .++...|+.. +++.++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 47899999999999 9999999999999999999999999999999999999998 7775458888 889999999
Q ss_pred HhhhHhc------CccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHH
Q 016216 171 GWADKIH------GLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241 (393)
Q Consensus 171 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l 241 (393)
+..+++. +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887775 343231 12445688999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 242 AKLFH----E----AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 242 ~~ll~----~----aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
++++. + +|+|+|++|+++ ++.++++.|..|++||.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667889999999999999999999999998865 599999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc---CCCCC
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPFK 373 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---G~p~~ 373 (393)
|++|||+|.|++.+++++|.|+| .|++++|+|||+++ |+|+++|+++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~ 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH
Confidence 99999999999999999999999 99999999999999 9999999999999998 98853
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3.2e-53 Score=424.09 Aligned_cols=265 Identities=18% Similarity=0.224 Sum_probs=239.7
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------cchHHH
Q 016216 94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLK-------SEVPMV 162 (393)
Q Consensus 94 ~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~Ev~~~ 162 (393)
-+++++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+||+. .++.. .|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 3679999999999999 9999999999999999999999999999999999999985 44431 489999
Q ss_pred HHHHHHHHHhhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHH
Q 016216 163 VRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239 (393)
Q Consensus 163 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~ 239 (393)
++.+++|+++.++ .+...+. ..+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999998765 3443331 22445688999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE
Q 016216 240 YVAKLFH----EAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314 (393)
Q Consensus 240 ~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV 314 (393)
.+++++. ++|+|+|++|+++|. +.+.++.|..|++||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 679999999999984 466788999999999999999999999999876 4899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 315 ~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 296 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV 296 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999 9999999999999999999999999999876
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=94.85 E-value=3.1 Score=40.31 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=97.9
Q ss_pred CCceEEEEEecceeEEEECCCC---ccHHHHHHHHHHHhhcCCE-EEE-ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 016216 185 GNYHIQTLHEPIGVAGQIVPWN---FPLLLFTWKVAPALTCGNT-IVL-KSAEQTPLTALYVAKLFHEAGLPPGVLNVVS 259 (393)
Q Consensus 185 ~~~~~~~~~~P~Gvv~~i~p~N---~P~~~~~~~l~~ALaaGN~-VIl-Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 259 (393)
.|......+.|+--|++..|.- ||-..+ -.++||-.+|+. +|+ -|++.. ...-.+.-+.+.+|..+ ++.
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVL-MNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHH-HHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHH-HhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EEE
Confidence 4556677899999999999953 554444 457899999986 333 343321 12223334455667653 444
Q ss_pred CCchhHHHHHHc----CCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE--cCCCCHHHHHHHHHHHHHh
Q 016216 260 GYGPTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII--FDDADVDQAVELAHFALFY 333 (393)
Q Consensus 260 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV--~~dADld~a~~~i~~~~~~ 333 (393)
-.|.+.-.+|.- -+.||+|+=.|..=+..+=++.. +..-+=+. .|.+=++| ++++|.+..+..++.-+=+
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~---g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF---GQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB---TTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc---CCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 335555556654 57899999999876654222221 21222122 34444333 4458999998887766544
Q ss_pred ccCCCccCCceEEEcCc--cHHHHHHHHHHHHhcC
Q 016216 334 NQGQCCCAGSRTYVHER--VYDEFVEKAKARAMRR 366 (393)
Q Consensus 334 ~~GQ~C~a~~~v~V~~~--i~d~f~~~L~~~~~~~ 366 (393)
.. ..+.++|..+ ..+++.+++.+.++.+
T Consensus 269 d~-----~a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 269 DE-----DAQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp CT-----TCEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred CC-----CCeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 43 2456677665 3555555555555543
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=82.31 E-value=38 Score=32.84 Aligned_cols=167 Identities=16% Similarity=0.115 Sum_probs=97.0
Q ss_pred CceEEEEEecceeEEEECCC---CccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 016216 186 NYHIQTLHEPIGVAGQIVPW---NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262 (393)
Q Consensus 186 ~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~ 262 (393)
|......+.|+.-|++..|. -||-.. +-..+||-.+|+.=|+--+|-. ..-.+.-..+.+|..+ ++.-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHH-HHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHH-HHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 55566789999999999996 355444 4457899999987554322211 1223334456677654 333235
Q ss_pred hhHHHHHHc----CCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEec-CCCCeEEE--cCCCCHHHHHHHHHHHHHhcc
Q 016216 263 PTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL-GGKSPFII--FDDADVDQAVELAHFALFYNQ 335 (393)
Q Consensus 263 ~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lel-gG~~~~iV--~~dADld~a~~~i~~~~~~~~ 335 (393)
.+.-.+|.- -|.||+|+=.|..=+...=+. ... ....|-..+ .|.+=++| +++||.+..+..++.-+=+..
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~-Vs~-~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQ-VSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HHH-CTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHH-hHh-hcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 555555543 478999999987655432211 111 011222222 34444443 456999999888776654433
Q ss_pred CCCccCCceEEEcCc--cHHHHHHHHHHHHhcC
Q 016216 336 GQCCCAGSRTYVHER--VYDEFVEKAKARAMRR 366 (393)
Q Consensus 336 GQ~C~a~~~v~V~~~--i~d~f~~~L~~~~~~~ 366 (393)
..+.++|..+ ..+++.+++.+.++.+
T Consensus 265 -----~a~aiLvT~s~~la~~V~~ev~~ql~~l 292 (434)
T 1kae_A 265 -----DSQVILLTPAADMARRVAEAVERQLAEL 292 (434)
T ss_dssp -----TCEEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred -----CCcEEEEECCHHHHHHHHHHHHHHHHhC
Confidence 2456677655 4566666666655544
No 55
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=73.49 E-value=8.7 Score=32.74 Aligned_cols=38 Identities=24% Similarity=0.437 Sum_probs=33.0
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 016216 221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (393)
Q Consensus 221 aaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (393)
..||-+|+|..|-. +..++.++...++|++++-.|.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 46999999988766 788899999888999999999984
No 56
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=69.83 E-value=31 Score=29.00 Aligned_cols=37 Identities=32% Similarity=0.539 Sum_probs=30.8
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 016216 221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (393)
Q Consensus 221 aaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (393)
..||-+|+|..|-. +..++.++...++| +++-.|.|+
T Consensus 110 ~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 110 DSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 46999999988766 78889999988877 588888884
No 57
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=68.56 E-value=7.1 Score=32.34 Aligned_cols=114 Identities=14% Similarity=0.078 Sum_probs=76.0
Q ss_pred eeEEEECCCC-ccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHHHcCC
Q 016216 197 GVAGQIVPWN-FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE-AGLPPGVLNVVSG-YGPTAGAALASHM 273 (393)
Q Consensus 197 Gvv~~i~p~N-~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~g-~~~~~~~~L~~~~ 273 (393)
|.|+++..-+ -+-...+.+-...++.|..++--. -|+ +.|.+ .|+|-..++=++. .++++++.+.+ .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG----NLISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 6666655544 355555666666777899887632 244 44555 7999766654432 34567766665 6
Q ss_pred CcCEEEEeCC-------hHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccC
Q 016216 274 DVDKLSFTGH-------CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336 (393)
Q Consensus 274 ~v~~V~ftGs-------~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~G 336 (393)
.|+.|+||-+ ...+..|++.+.. +.+|+.-.+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 9999999876 5678889999988 668887543 456677777777764
No 58
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=66.02 E-value=23 Score=30.00 Aligned_cols=121 Identities=17% Similarity=0.025 Sum_probs=79.9
Q ss_pred EEEEecc-eeEEEECCCCc-cHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhH
Q 016216 190 QTLHEPI-GVAGQIVPWNF-PLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE-AGLPPGVLNVVSG-YGPTA 265 (393)
Q Consensus 190 ~~~~~P~-Gvv~~i~p~N~-P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~g-~~~~~ 265 (393)
....-|. |.|+++..-+. +-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++=++. .++++
T Consensus 20 ~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI 90 (178)
T 1vmd_A 20 YKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQI 90 (178)
T ss_dssp EEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHH
T ss_pred eeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchH
Confidence 3334444 76766665443 555556666677778998875 33444 44455 7999665543332 34567
Q ss_pred HHHHHcCCCcCEEEEeCC-------hHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccC
Q 016216 266 GAALASHMDVDKLSFTGH-------CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336 (393)
Q Consensus 266 ~~~L~~~~~v~~V~ftGs-------~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~G 336 (393)
++.+.+ ..|+.|+||-+ ...+..|++.+.. ..+|+.-.+ ..++.++.+.+++..
T Consensus 91 ~d~I~~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 91 GAMIAE-GKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHT-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHHHC-CCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 766665 79999999876 3467889999988 658887543 456777888888764
No 59
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=65.15 E-value=2.3 Score=34.51 Aligned_cols=86 Identities=15% Similarity=0.085 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHHHHHcCCCcCEEEEeCC---
Q 016216 209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE-AGLPPGVLNVVS-GYGPTAGAALASHMDVDKLSFTGH--- 283 (393)
Q Consensus 209 ~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~-g~~~~~~~~L~~~~~v~~V~ftGs--- 283 (393)
-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++=++ +.++++++.+.+ ..|+.|+||=+
T Consensus 17 ~~v~~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~ 86 (134)
T 2xw6_A 17 EMVAFCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLT 86 (134)
T ss_dssp HHHHHHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTT
T ss_pred HHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCccc
Confidence 33334444455666776664 33444 44445 799977666555 545677777665 69999999977
Q ss_pred ----hHHHHHHHHHHhhcCCccEEEe
Q 016216 284 ----CDTGKIVQELAAKSNLKPVTLE 305 (393)
Q Consensus 284 ----~~~g~~i~~~~a~~~~~pv~le 305 (393)
...+..|++.+.. +.+|+.-.
T Consensus 87 ~~~h~~D~~~IrR~A~~-~~IP~~T~ 111 (134)
T 2xw6_A 87 AQPHEPDVQALLRVCDV-HGVPLATN 111 (134)
T ss_dssp CCTTSCCSHHHHHHHHH-HTCCEECS
T ss_pred CCCccchHHHHHHHHHH-cCCCeEcC
Confidence 3456889998887 55787654
No 60
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=63.69 E-value=29 Score=23.32 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH
Q 016216 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALET 144 (393)
Q Consensus 92 ~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 144 (393)
.+.++.+..+++.-+|...|+|... .+|+-++..|++-++.++.-+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 3667777888888888888999875 5677888888888888877653
No 61
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=62.38 E-value=56 Score=26.72 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=30.6
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 016216 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (393)
Q Consensus 222 aGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (393)
.||-+|+|..|-. +..++.++...++|+ ++-.|.|+
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999998766 788999999988876 88888884
No 62
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=58.80 E-value=12 Score=30.50 Aligned_cols=73 Identities=11% Similarity=0.112 Sum_probs=50.7
Q ss_pred CCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC-c----hhHHHHHHcCCCcCEEEEeCCh-----HHHHHHHH
Q 016216 223 GNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY-G----PTAGAALASHMDVDKLSFTGHC-----DTGKIVQE 292 (393)
Q Consensus 223 GN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~-~----~~~~~~L~~~~~v~~V~ftGs~-----~~g~~i~~ 292 (393)
|-.++- |.-| ++.|.+.|+|-..|+-++.. + +.+.+.+.+ ..|+.|++|-+. ..+..|++
T Consensus 50 Gf~i~A-----T~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR 119 (143)
T 2yvq_A 50 GFKLFA-----TEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRR 119 (143)
T ss_dssp TCEEEE-----EHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHH
T ss_pred CCEEEE-----CchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHH
Confidence 777664 2233 44567889997777666543 3 567776665 689999998665 37888999
Q ss_pred HHhhcCCccEEEec
Q 016216 293 LAAKSNLKPVTLEL 306 (393)
Q Consensus 293 ~~a~~~~~pv~lel 306 (393)
.+.. +.+|++-.+
T Consensus 120 ~Av~-~~IP~~T~~ 132 (143)
T 2yvq_A 120 TAVD-SGIPLLTNF 132 (143)
T ss_dssp HHHH-TTCCEECSH
T ss_pred HHHH-hCCCeEcCH
Confidence 9888 668887553
No 63
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=56.42 E-value=12 Score=33.13 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=44.9
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK 288 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 288 (393)
+..++-.+.+||-||++.+. +.....+..+|... +|.|++++++.. .+- ...-..+.+.++.+...-.
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~iP~ 88 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQIPP 88 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCCCH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcccCc
Confidence 45677788899999999875 33556667777777 999999998642 111 1122345666666554443
No 64
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=50.76 E-value=31 Score=24.33 Aligned_cols=56 Identities=20% Similarity=0.237 Sum_probs=39.7
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 222 aGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
.+|-+|+|..|-. +..++.++.+.++|+ ++-.+.|++ + .++..-+.+.+..+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDD-T------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCC-E------------EEEEECCHHHHHHHHHHH
Confidence 6999999988766 788899999988876 888888742 1 233444555555555544
No 65
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=50.32 E-value=33 Score=24.71 Aligned_cols=36 Identities=33% Similarity=0.561 Sum_probs=30.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 016216 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (393)
Q Consensus 222 aGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (393)
++|-+|+|..|-. +..++.++.+.++|+ ++-.+.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988766 788899999988876 88888874
No 66
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=43.46 E-value=32 Score=25.07 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=30.2
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 016216 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (393)
Q Consensus 222 aGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (393)
.||-+|+|..|-. +..++.++.+.++|+ ++-.+.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999988766 788999999887776 88888874
No 67
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=41.60 E-value=30 Score=24.92 Aligned_cols=37 Identities=22% Similarity=0.455 Sum_probs=31.2
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 016216 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (393)
Q Consensus 222 aGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (393)
.+|-+|+|..|-. +..++.++.+.+.+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999988666 788888888877888899999884
No 68
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=37.52 E-value=32 Score=27.42 Aligned_cols=50 Identities=20% Similarity=0.124 Sum_probs=33.9
Q ss_pred CcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEE
Q 016216 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVT 303 (393)
Q Consensus 253 g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~ 303 (393)
|.+.+++|+..+.-....+..++.+|++||+......+.+.+.+ ...|++
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~-~~ipvl 102 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE-RGVPVI 102 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH-HTCCEE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH-CCCeEE
Confidence 56787778665544333332578999999998888888877765 334443
No 69
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=32.56 E-value=28 Score=28.87 Aligned_cols=51 Identities=20% Similarity=0.259 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCcCEEEEeCChHHHH
Q 016216 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH--MDVDKLSFTGHCDTGK 288 (393)
Q Consensus 237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~--~~v~~V~ftGs~~~g~ 288 (393)
....|.+++.+.|+..-...+++.+ ..+.+.|.+. .+.|.|+.||++..+.
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 4567888889988876666777766 6666665442 3689999999886654
No 70
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=30.02 E-value=27 Score=29.06 Aligned_cols=52 Identities=19% Similarity=0.200 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc---CCCcCEEEEeCChHHH
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS---HMDVDKLSFTGHCDTG 287 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~---~~~v~~V~ftGs~~~g 287 (393)
..+..+.+.+.+.|+..-...++..+...+.+.|.. ..+.|.|+.||++..+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 456678888888888654455665544445555433 2368999999988654
No 71
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=27.25 E-value=90 Score=25.83 Aligned_cols=52 Identities=19% Similarity=0.061 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH---cCCCcCEEEEeCChHHH
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA---SHMDVDKLSFTGHCDTG 287 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~---~~~~v~~V~ftGs~~~g 287 (393)
.....|.+.|.+.|+.--...++..+...+...+. .....|.|+.||++..+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 45678899999999865445555544344444443 34678999999998654
No 72
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.89 E-value=32 Score=29.27 Aligned_cols=53 Identities=21% Similarity=0.149 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCcCEEEEeCChHHHH
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH--MDVDKLSFTGHCDTGK 288 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~--~~v~~V~ftGs~~~g~ 288 (393)
.....+.+++.+.|+..-...+++.+...+.+.|... .+.|.|+.||++..+.
T Consensus 49 sn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 49 HSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp SHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 3567788889998876555566665444555555442 4689999999887654
Done!