Query 016220
Match_columns 393
No_of_seqs 115 out of 130
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 09:55:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016220.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016220hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wa8a1 a.25.3.1 (A:1-99) ESAT 86.5 1.6 0.00011 32.3 8.1 69 50-120 9-79 (99)
2 d2fcwa1 a.13.1.1 (A:216-320) a 86.1 0.87 6.4E-05 36.6 6.7 64 55-118 8-98 (105)
3 d1noga_ a.25.2.2 (A:) Hypothet 81.2 0.66 4.8E-05 38.6 4.2 66 47-112 13-78 (149)
4 d1wa8b1 a.25.3.1 (B:602-695) E 79.3 5.8 0.00043 29.1 8.8 67 49-117 8-76 (94)
5 d2efla1 a.238.1.4 (A:1-288) Fo 71.1 11 0.00081 30.7 9.3 25 64-88 117-141 (288)
6 d1i4da_ a.238.1.2 (A:) Arfapti 70.0 6.1 0.00045 30.9 7.1 33 48-82 93-125 (200)
7 d1xzpa1 a.24.25.1 (A:118-211,A 69.9 5.2 0.00038 32.3 6.8 65 49-114 19-83 (173)
8 d1vf7a_ f.46.1.1 (A:) Multidru 69.6 6.1 0.00044 31.7 7.2 59 61-123 56-114 (237)
9 d1t72a_ a.7.12.1 (A:) Phosphat 69.6 4.6 0.00033 33.0 6.4 53 64-116 10-70 (215)
10 d2efka1 a.238.1.4 (A:10-288) C 67.4 11 0.00078 30.8 8.4 11 103-113 133-143 (279)
11 d1rtya_ a.25.2.2 (A:) Putative 66.5 2.2 0.00016 35.5 3.8 66 47-112 15-86 (161)
12 d1tbga_ b.69.4.1 (A:) beta1-su 64.1 0.82 6E-05 36.2 0.6 23 65-87 2-24 (340)
13 d1xwma_ a.7.12.1 (A:) Phosphat 64.0 5.9 0.00043 32.1 6.0 31 86-116 33-63 (212)
14 d1f5na1 a.114.1.1 (A:284-583) 63.0 19 0.0014 29.6 9.2 28 63-90 216-243 (300)
15 d1ivsa1 a.2.7.3 (A:797-862) Va 62.2 12 0.00087 26.2 6.6 55 61-118 7-64 (66)
16 d2azea1 e.63.1.1 (A:199-346) T 60.9 5.5 0.0004 33.4 5.3 46 65-111 2-47 (148)
17 d2fupa1 a.47.5.1 (A:1-130) Hyp 58.8 13 0.00092 28.4 6.8 57 63-119 11-67 (130)
18 d1fpoa2 a.23.1.1 (A:77-171) HS 58.8 16 0.0011 27.2 7.2 32 85-117 62-93 (95)
19 d2efka1 a.238.1.4 (A:10-288) C 58.3 18 0.0013 29.3 8.2 29 63-91 107-135 (279)
20 d1seta1 a.2.7.1 (A:1-110) Sery 57.4 26 0.0019 26.2 8.4 55 63-117 40-95 (110)
21 d1ez3a_ a.47.2.1 (A:) Syntaxin 55.2 3.8 0.00027 31.6 3.0 28 50-79 4-31 (124)
22 d2bdea1 c.108.1.23 (A:2-459) C 54.0 36 0.0026 32.4 10.6 29 93-121 374-402 (458)
23 d1ivsa1 a.2.7.3 (A:797-862) Va 52.5 32 0.0024 23.8 7.6 20 83-102 43-62 (66)
24 d1vcsa1 a.47.2.1 (A:8-96) Vesi 52.3 8.2 0.0006 29.1 4.5 22 40-62 26-47 (89)
25 d1v9da_ a.207.1.1 (A:) Diaphan 51.6 3.5 0.00026 36.7 2.6 21 63-83 210-230 (332)
26 d1e52a_ a.2.9.1 (A:) C-termina 51.5 12 0.00085 26.5 4.9 41 62-104 14-54 (56)
27 d1vqov1 a.2.2.1 (V:1-65) Ribos 50.1 3.8 0.00028 29.5 2.1 45 60-106 13-57 (65)
28 d2bdea1 c.108.1.23 (A:2-459) C 49.8 3.3 0.00024 39.9 2.2 27 107-136 381-407 (458)
29 d1yzma1 a.2.19.1 (A:456-501) F 48.7 22 0.0016 24.5 5.8 41 63-112 4-44 (46)
30 d1sumb_ a.7.12.1 (B:) PhoU hom 48.2 20 0.0015 29.2 6.8 26 87-112 36-61 (225)
31 d2f1ka1 a.100.1.12 (A:166-279) 48.0 15 0.0011 28.3 5.5 25 62-86 71-95 (114)
32 d1ez3a_ a.47.2.1 (A:) Syntaxin 47.5 27 0.002 26.4 7.1 13 66-78 11-23 (124)
33 d1gqea_ e.38.1.1 (A:) Polypept 47.4 33 0.0024 31.4 8.8 56 64-121 64-119 (362)
34 d2d4ca1 a.238.1.1 (A:11-247) E 46.7 8.9 0.00065 30.9 4.2 13 70-82 151-163 (237)
35 d2g5ca1 a.100.1.12 (A:201-310) 45.6 9.2 0.00067 29.4 3.9 27 60-86 67-93 (110)
36 d2gycw1 a.2.2.1 (W:1-60) Ribos 45.5 15 0.0011 25.7 4.7 45 60-107 11-55 (60)
37 d1f5na1 a.114.1.1 (A:284-583) 44.8 30 0.0022 28.3 7.4 14 102-115 286-299 (300)
38 d1i4da_ a.238.1.2 (A:) Arfapti 44.8 28 0.002 26.8 6.9 22 67-88 140-161 (200)
39 d1xsva_ a.4.13.3 (A:) Hypothet 44.0 12 0.00086 29.0 4.4 51 68-118 49-104 (106)
40 d1gg2g_ a.137.3.1 (G:) Transdu 43.4 5.8 0.00042 27.9 2.2 18 101-118 1-18 (54)
41 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 42.9 36 0.0026 26.1 7.2 9 66-74 50-58 (196)
42 d1qvra2 c.37.1.20 (A:149-535) 40.5 20 0.0015 32.9 6.1 12 107-118 320-331 (387)
43 d1nlwa_ a.38.1.1 (A:) Mad prot 39.9 19 0.0014 25.7 4.7 7 51-57 42-48 (79)
44 d1vf7a_ f.46.1.1 (A:) Multidru 39.5 9.4 0.00068 30.6 3.2 56 62-121 50-105 (237)
45 d2ap3a1 a.24.27.1 (A:12-196) H 39.2 60 0.0044 23.1 8.0 50 66-115 124-173 (185)
46 d1h2vc3 a.118.1.14 (C:481-790) 37.4 12 0.00087 34.0 3.9 50 63-112 175-229 (310)
47 d1ab4a_ e.11.1.1 (A:) DNA Gyra 37.0 18 0.0013 34.2 5.3 48 64-118 439-486 (493)
48 d1qvra2 c.37.1.20 (A:149-535) 36.4 35 0.0026 31.1 7.1 23 64-86 288-310 (387)
49 d1s35a2 a.7.1.1 (A:1169-1273) 36.4 55 0.004 23.0 6.9 28 91-118 77-104 (105)
50 d1nkpa_ a.38.1.1 (A:) Myc prot 36.3 19 0.0014 26.1 4.3 13 49-61 19-31 (88)
51 d1u00a1 a.8.4.1 (A:504-615) Ch 36.0 45 0.0032 25.2 6.6 38 47-84 36-73 (112)
52 d1joya_ a.30.2.1 (A:) EnvZ his 35.3 25 0.0018 24.2 4.6 31 42-72 7-39 (67)
53 d1rw6a_ a.47.4.1 (A:) CAPPD, a 35.3 60 0.0043 27.7 7.9 43 36-80 7-53 (192)
54 d1lvfa_ a.47.2.1 (A:) Syntaxin 34.6 86 0.0062 23.5 9.0 65 49-117 38-104 (106)
55 d1wrda1 a.7.8.1 (A:215-307) Ta 34.5 27 0.002 25.9 5.0 49 62-110 5-62 (93)
56 d256ba_ a.24.3.1 (A:) Cytochro 34.4 41 0.003 25.6 6.1 13 100-112 66-78 (106)
57 d1urua_ a.238.1.1 (A:) Amphiph 34.2 7.4 0.00054 30.8 1.7 16 67-82 113-128 (217)
58 d1r73a_ a.2.2.1 (A:) Ribosomal 33.8 61 0.0044 22.8 6.6 49 60-111 11-59 (66)
59 d1io1a_ e.32.1.1 (A:) Phase 1 33.7 23 0.0017 28.9 4.8 18 102-119 53-70 (395)
60 d1nkpa_ a.38.1.1 (A:) Myc prot 33.7 22 0.0016 25.8 4.3 13 101-113 74-86 (88)
61 d1u2ma_ f.48.1.1 (A:) Periplas 32.9 16 0.0012 27.8 3.5 7 17-23 5-11 (143)
62 d1gqea_ e.38.1.1 (A:) Polypept 32.9 46 0.0033 30.4 7.2 14 107-120 98-111 (362)
63 d1ek8a_ d.67.3.1 (A:) Ribosome 31.8 55 0.004 27.1 7.0 74 39-117 105-183 (185)
64 d2bzba1 a.30.7.1 (A:1-54) Hypo 31.6 22 0.0016 25.3 3.6 40 81-120 10-49 (54)
65 d1jnra1 a.7.3.1 (A:503-643) Ad 31.5 43 0.0031 26.6 6.0 29 91-121 63-92 (141)
66 d2piha1 a.281.1.1 (A:2-124) Un 31.2 99 0.0072 23.2 8.1 45 33-79 12-60 (123)
67 d2zjrv1 a.2.2.1 (V:1-66) Ribos 31.1 35 0.0025 24.2 4.8 47 60-109 11-57 (66)
68 d1ux5a_ a.207.1.1 (A:) Bni1 {B 30.0 61 0.0045 29.1 7.6 23 63-85 296-318 (411)
69 d1nkpb_ a.38.1.1 (B:) Max prot 29.6 49 0.0036 23.6 5.5 22 96-117 57-78 (83)
70 d2nvpa1 a.102.1.8 (A:2-427) Hy 29.1 9 0.00066 36.7 1.6 83 37-119 123-268 (426)
71 d1dd5a_ d.67.3.1 (A:) Ribosome 28.8 70 0.0051 26.4 7.2 38 39-77 104-141 (184)
72 d1wmib1 a.137.13.1 (B:7-67) Hy 28.8 17 0.0013 25.8 2.7 24 63-86 3-26 (61)
73 d2a0ba_ a.24.10.1 (A:) Aerobic 28.3 87 0.0063 22.7 7.0 25 56-80 40-64 (118)
74 d1ei7a_ a.24.5.1 (A:) Tobacco 28.1 35 0.0025 28.7 5.0 36 42-77 98-135 (158)
75 d1yvia1 a.24.10.2 (A:2-143) Hi 27.7 29 0.0021 27.0 4.2 60 49-117 72-131 (142)
76 d1am9a_ a.38.1.1 (A:) SREBP-1a 27.6 42 0.0031 24.0 4.8 13 49-61 19-31 (80)
77 d2fhea1 a.45.1.1 (A:81-216) Cl 27.2 83 0.006 23.8 6.9 22 57-78 8-29 (136)
78 d1uklc_ a.38.1.1 (C:) SREBP-2 27.2 39 0.0028 23.2 4.4 32 48-81 25-56 (61)
79 d1eh1a_ d.67.3.1 (A:) Ribosome 27.1 85 0.0062 25.9 7.4 37 39-76 106-142 (185)
80 d2d4ca1 a.238.1.1 (A:11-247) E 27.0 1.2E+02 0.0089 23.7 8.2 16 64-79 152-167 (237)
81 d2e50a1 d.305.1.1 (A:1-222) Pr 26.9 1.2E+02 0.0084 25.6 8.4 46 47-96 24-72 (222)
82 d1ek9a_ f.5.1.1 (A:) Integral 26.5 1.7E+02 0.012 24.3 9.5 57 63-119 126-185 (428)
83 d1wqga1 d.67.3.1 (A:2-184) Rib 25.9 92 0.0067 25.6 7.4 69 39-108 104-172 (183)
84 d1ef1c_ a.137.5.1 (C:) Moesin 25.7 18 0.0013 27.9 2.6 41 50-93 18-58 (90)
85 d1nkpb_ a.38.1.1 (B:) Max prot 25.3 46 0.0033 23.7 4.7 9 51-59 42-50 (83)
86 d1ek9a_ f.5.1.1 (A:) Integral 25.2 1.6E+02 0.012 24.4 9.0 24 63-86 337-360 (428)
87 d2jn6a1 a.4.1.19 (A:1-89) Unch 24.5 11 0.00081 27.4 1.0 21 63-83 64-84 (89)
88 d1fxka_ a.2.5.1 (A:) Prefoldin 24.4 1.3E+02 0.0092 22.2 9.2 24 95-118 81-104 (107)
89 d1fxka_ a.2.5.1 (A:) Prefoldin 24.2 78 0.0057 23.5 6.0 11 97-107 90-100 (107)
90 d2gsqa1 a.45.1.1 (A:76-202) Cl 24.1 1.1E+02 0.0079 21.3 7.2 52 59-116 11-62 (127)
91 d1uklc_ a.38.1.1 (C:) SREBP-2 24.0 55 0.004 22.3 4.7 26 93-118 33-58 (61)
92 d1eq1a_ a.63.1.1 (A:) Apolipop 23.7 1.1E+02 0.0078 25.2 7.3 48 64-111 109-157 (166)
93 d1fxkc_ a.2.5.1 (C:) Prefoldin 22.8 44 0.0032 25.3 4.4 15 63-77 13-27 (133)
94 d1is1a_ d.67.3.1 (A:) Ribosome 22.6 1E+02 0.0074 25.4 7.0 38 39-77 105-142 (185)
95 d1io1a_ e.32.1.1 (A:) Phase 1 22.6 22 0.0016 29.1 2.6 15 63-77 56-70 (395)
96 d1cxzb_ a.2.6.1 (B:) Protein k 22.3 64 0.0046 24.5 5.1 18 101-118 64-81 (86)
97 d1vb5a_ c.124.1.5 (A:) Putativ 22.3 39 0.0028 29.6 4.4 66 53-118 33-100 (274)
98 d1nlwa_ a.38.1.1 (A:) Mad prot 22.3 47 0.0035 23.4 4.2 15 102-116 63-77 (79)
99 d1fxkc_ a.2.5.1 (C:) Prefoldin 22.2 83 0.0061 23.6 6.0 24 93-116 109-132 (133)
100 d2etda1 a.29.9.1 (A:35-183) Hy 22.2 77 0.0056 24.8 5.9 13 71-83 5-17 (149)
101 d1seta1 a.2.7.1 (A:1-110) Sery 22.0 1.3E+02 0.0093 22.1 6.9 20 93-112 78-97 (110)
102 d1ykhb1 a.252.1.1 (B:2-130) RN 21.9 1.1E+02 0.0082 23.9 6.9 29 90-118 95-123 (129)
103 d1mswd_ e.8.1.3 (D:) T7 RNA po 21.7 90 0.0066 31.2 7.6 58 60-117 33-92 (882)
104 d1khba1 c.91.1.1 (A:260-622) C 21.2 35 0.0025 31.9 4.0 37 67-103 323-361 (363)
105 d3b8oa1 d.58.60.1 (A:55-319) L 20.6 46 0.0033 28.8 4.5 30 64-93 146-175 (265)
106 d1r9da_ c.7.1.1 (A:) Glycerol 20.4 77 0.0056 31.8 6.7 37 63-99 172-208 (786)
No 1
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=86.49 E-value=1.6 Score=32.29 Aligned_cols=69 Identities=7% Similarity=-0.024 Sum_probs=49.0
Q ss_pred HHHHHHHhHHHHH--HHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016220 50 FLHLAFQHCYCAI--FLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMNAP 120 (393)
Q Consensus 50 ~~~~~~~~~~~~~--l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElanae 120 (393)
+|+.+.++++..+ |..+|+.|++++..+.... +=.+..--.++.+...+++..|...|++|+..|..+.
T Consensus 9 ~l~~~A~~~~~~~~~l~~~l~~l~~~v~~l~~~W--~G~A~~af~~~~~~w~~~~~~l~~~L~~i~~~L~~aa 79 (99)
T d1wa8a1 9 TLAQEAGNFERISGDLKTQIDQVESTAGSLQGQW--RGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAG 79 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555444 6777788888887777653 3344555677788888999999999999999887653
No 2
>d2fcwa1 a.13.1.1 (A:216-320) alpha-2-Macroglobulin receptor associated protein (RAP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.05 E-value=0.87 Score=36.64 Aligned_cols=64 Identities=13% Similarity=-0.058 Sum_probs=44.5
Q ss_pred HHhHHHHHH-----HHHHHHHHHHHHhhh------------hhhhhhhccc----------hhhHHHHHHHHHHHHHHHH
Q 016220 55 FQHCYCAIF-----LKIWSKNAITFHLCR------------GTYEYEKKFY----------NDHLESLQVMEKNYITMAT 107 (393)
Q Consensus 55 ~~~~~~~~l-----~~Eid~lrqElqr~R------------~a~EyEKK~~----------~e~~Eq~q~MEKnlisMar 107 (393)
.|+|-..++ ..||+.|+.||.|.- .++..||-.+ .+..|-.+.||.++--+++
T Consensus 8 Vq~LW~~A~~~nFt~~EL~SlkeEL~HfE~rl~K~rH~~~el~ls~ek~~~~e~~g~~~~~~~~~e~~~~le~kiKk~~~ 87 (105)
T d2fcwa1 8 VIDLWDLAQSANLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKLRHAESVGDGERVSRSREKHALLEGRTKELGY 87 (105)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhhcchHHHHHHHHHHHHHHHH
Confidence 345555554 678888888876532 2333454332 2345678899999999999
Q ss_pred HHHHHHHHHhc
Q 016220 108 EVEKLRAELMN 118 (393)
Q Consensus 108 EvEKLRaElan 118 (393)
-|+||+.+|.+
T Consensus 88 kV~Kl~~dLe~ 98 (105)
T d2fcwa1 88 TVKKHLQDLSG 98 (105)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999975
No 3
>d1noga_ a.25.2.2 (A:) Hypothetical protein Ta0546 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=81.17 E-value=0.66 Score=38.59 Aligned_cols=66 Identities=12% Similarity=-0.007 Sum_probs=42.9
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHH
Q 016220 47 QYYFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKL 112 (393)
Q Consensus 47 ~~~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKL 112 (393)
|.+.|=++.-+++...++..|..+|++|-.+=+.+-...+.+.-.-|+.+.||+-+..|-.++..|
T Consensus 13 Lns~iGla~~~~~~~~~~~~L~~IQ~~Lf~lga~lA~~~~~~~i~~~~v~~LE~~id~~~~~lp~l 78 (149)
T d1noga_ 13 LNSFIGYALVLSRWDDIRNDLFRIQNDLFVLGEDVSTGGKGRTVTREMIDYLEARVKEMKAEIGKI 78 (149)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHccCchhHHHHHHHHHHHHHHhhHHHhcccccccccHHHHHHHHHHHHHHHhhhccc
Confidence 444454455455555678888889999988877775544444445567778888777776655443
No 4
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=79.26 E-value=5.8 Score=29.07 Aligned_cols=67 Identities=4% Similarity=-0.045 Sum_probs=44.2
Q ss_pred HHHHHHHHhHHHHH--HHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016220 49 YFLHLAFQHCYCAI--FLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELM 117 (393)
Q Consensus 49 ~~~~~~~~~~~~~~--l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaEla 117 (393)
-.|+.+..+|++.. |..+|+.|+.++..++..-+=+ +...-.+..+.-.+++-.|...|.+|..-|.
T Consensus 8 ~~l~~~a~~i~~~~~~i~~~l~~L~~~~~~l~~~W~G~--A~~af~~~~~~W~~~~~~l~~~L~~i~~~l~ 76 (94)
T d1wa8b1 8 AGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGS--GSEAYQGVQQKWDATATELNNALQNLARTIS 76 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCS--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45777888887766 8999999999999998875544 3333334444455555555555555555543
No 5
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.12 E-value=11 Score=30.74 Aligned_cols=25 Identities=16% Similarity=0.185 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccc
Q 016220 64 LKIWSKNAITFHLCRGTYEYEKKFY 88 (393)
Q Consensus 64 ~~Eid~lrqElqr~R~a~EyEKK~~ 88 (393)
..++..+.++++.....++--|+.+
T Consensus 117 ~~~~~k~~k~~~~~~~~l~k~k~~Y 141 (288)
T d2efla1 117 FHDGRKAQQHIETCWKQLESSKRRF 141 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444
No 6
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.03 E-value=6.1 Score=30.85 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=17.3
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhh
Q 016220 48 YYFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYE 82 (393)
Q Consensus 48 ~~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~E 82 (393)
..++...++++++. +..++..+.|+.++|.-++
T Consensus 93 ~~~~~~~~~~~~~~--~kk~~~~~~dyd~~~~k~~ 125 (200)
T d1i4da_ 93 NTLVTKTMEDTLMT--VKQYEAARLEYDAYRTDLE 125 (200)
T ss_dssp HHHHHTHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHH
Confidence 34444455554433 4455566666666665544
No 7
>d1xzpa1 a.24.25.1 (A:118-211,A:372-450) TrmE connector domain {Thermotoga maritima [TaxId: 2336]}
Probab=69.90 E-value=5.2 Score=32.32 Aligned_cols=65 Identities=5% Similarity=-0.061 Sum_probs=38.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016220 49 YFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRA 114 (393)
Q Consensus 49 ~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRa 114 (393)
..++.|++-|. =.|...|+.+|++|..+|+-+|.+-..--|...-...+.++|-.+-.++++|-.
T Consensus 19 ~~~~~A~~~l~-G~ls~~i~~ir~~L~~l~a~iEa~iDf~ee~~~~~~~~~~~l~~i~~~l~~li~ 83 (173)
T d1xzpa1 19 TSLKLSLRNLK-GGLRDFVDSLRRELIEVLAEIRVELDYPDEIETNTGEVVTRLERIKEKLTEELK 83 (173)
T ss_dssp HHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CchhHHHHHHHHHHHHHHHHHHHhcCCcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 34566666653 357889999999999999988876554322222222233444444455555443
No 8
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=69.61 E-value=6.1 Score=31.74 Aligned_cols=59 Identities=8% Similarity=-0.053 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 016220 61 AIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMNAPNVD 123 (393)
Q Consensus 61 ~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElanae~~~ 123 (393)
..++++++.++.+++|.+..+. .....-.++...+.++.....++++++..|.++.-++
T Consensus 56 ~~a~a~~~~a~~~~~r~~~l~~----~~~~~~~~~~~~~~~~~~a~~~l~~a~~~l~~~~i~a 114 (237)
T d1vf7a_ 56 QSAQANLASTQEQAQRYKLLVA----DQAVSKQQYADANAAYLQSKAAVEQARINLRYTKVLS 114 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEC
T ss_pred hhhhhhhhhhhhhhhhhhhhhh----ccccccchhhhhhhhcchhHHHHHHHhhhhccccccc
Confidence 4457788888888888775432 1122335566788888888889999999998765443
No 9
>d1t72a_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Aquifex aeolicus [TaxId: 63363]}
Probab=69.61 E-value=4.6 Score=32.96 Aligned_cols=53 Identities=9% Similarity=-0.009 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhh--------hhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016220 64 LKIWSKNAITFHLC--------RGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAEL 116 (393)
Q Consensus 64 ~~Eid~lrqElqr~--------R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaEl 116 (393)
-.||+.|++|+.+. ..+++.=++.+.++.++...+|+.+..|.+||++.=..+
T Consensus 10 ~~~L~~l~~~l~~M~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~l~~~I~~~~~~~ 70 (215)
T d1t72a_ 10 FKELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCIRM 70 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34455555555443 334443345567778888888888888888888765443
No 10
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.40 E-value=11 Score=30.79 Aligned_cols=11 Identities=27% Similarity=0.096 Sum_probs=4.1
Q ss_pred HHHHHHHHHHH
Q 016220 103 ITMATEVEKLR 113 (393)
Q Consensus 103 isMarEvEKLR 113 (393)
....+|+|+++
T Consensus 133 ~~~~~e~e~~~ 143 (279)
T d2efka1 133 ERDCREAEKAA 143 (279)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 11
>d1rtya_ a.25.2.2 (A:) Putative ATP-binding cobalamin adenosyltransferase YvqK {Bacillus subtilis [TaxId: 1423]}
Probab=66.50 E-value=2.2 Score=35.51 Aligned_cols=66 Identities=20% Similarity=0.171 Sum_probs=38.1
Q ss_pred hhHHHHHHHHhHHH----HHHHHHHHHHHHHHHhhhhhhhh--hhccchhhHHHHHHHHHHHHHHHHHHHHH
Q 016220 47 QYYFLHLAFQHCYC----AIFLKIWSKNAITFHLCRGTYEY--EKKFYNDHLESLQVMEKNYITMATEVEKL 112 (393)
Q Consensus 47 ~~~~~~~~~~~~~~----~~l~~Eid~lrqElqr~R~a~Ey--EKK~~~e~~Eq~q~MEKnlisMarEvEKL 112 (393)
|.+.|=+|..+|+. ..++.+|..+|++|-.+-+.+-. |++...-.-|+.+.||+-+..|-.++++|
T Consensus 15 Lns~iGla~~~~~~~~~~~~~~~~L~~IQ~~Lf~ig~~la~~~~~~~~~i~~~~v~~LE~~ID~~~~~lp~l 86 (161)
T d1rtya_ 15 LNSFIGLALAELSGQPGFEDLTAELLTIQHELFDCGGDLAIVTERKDYKLTEESVSFLETRIDAYTAEAPEL 86 (161)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHHCCCccccccccCHHHHHHHHHHHHHHHhhhccc
Confidence 44455555555443 34677888889998888776643 33322223356667777666666555544
No 12
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=64.12 E-value=0.82 Score=36.20 Aligned_cols=23 Identities=4% Similarity=-0.117 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcc
Q 016220 65 KIWSKNAITFHLCRGTYEYEKKF 87 (393)
Q Consensus 65 ~Eid~lrqElqr~R~a~EyEKK~ 87 (393)
+|||.||||.+.++..|.-+||.
T Consensus 2 ~~~~~l~~~~~~l~~~~~~~~~~ 24 (340)
T d1tbga_ 2 SELDQLRQEAEQLKNQIRDARKA 24 (340)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh
Confidence 57888888888888777666543
No 13
>d1xwma_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Bacillus stearothermophilus [TaxId: 1422]}
Probab=63.98 E-value=5.9 Score=32.07 Aligned_cols=31 Identities=10% Similarity=-0.028 Sum_probs=21.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016220 86 KFYNDHLESLQVMEKNYITMATEVEKLRAEL 116 (393)
Q Consensus 86 K~~~e~~Eq~q~MEKnlisMarEvEKLRaEl 116 (393)
+.+.+..++...+|+.+..|-+||+.+=..|
T Consensus 33 ~~D~~~a~~v~~~d~~id~l~~~I~~~~~~~ 63 (212)
T d1xwma_ 33 TQNANLAMAVIDGDGSIDALEEEVNDFALWL 63 (212)
T ss_dssp HTCHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4466777778888888888888887654443
No 14
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.01 E-value=19 Score=29.63 Aligned_cols=28 Identities=7% Similarity=-0.116 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccchh
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKKFYND 90 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK~~~e 90 (393)
+..+++.|++++.+.+..++-.++...+
T Consensus 216 ~~~~~~~l~~~~~~~~~~~e~~~~~~ee 243 (300)
T d1f5na1 216 AQASAKMLHEMQRKNEQMMEQKERSYQE 243 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444333
No 15
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=62.18 E-value=12 Score=26.21 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh---hhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016220 61 AIFLKIWSKNAITFHLCRGTYE---YEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMN 118 (393)
Q Consensus 61 ~~l~~Eid~lrqElqr~R~a~E---yEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElan 118 (393)
.-|..+|+.|.+|+.++..-+. |-+|+-.+.+|+.+ .+|..+-.|+++|..-|++
T Consensus 7 ~RL~K~l~kl~~~i~~~~~kL~N~~F~~kAP~~Vv~~~k---~kl~~~~~~~~~l~~~l~~ 64 (66)
T d1ivsa1 7 RRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEE---ARLKENLEQAERIREALSQ 64 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTHHHHSCTTHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCChHHHHhCCHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Confidence 4467778888888888877764 66777777777765 4556666778888777754
No 16
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.93 E-value=5.5 Score=33.41 Aligned_cols=46 Identities=7% Similarity=0.014 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHH
Q 016220 65 KIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEK 111 (393)
Q Consensus 65 ~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEK 111 (393)
+|.+.|+.|.++.+.-|+--|..--|+++|.-++ ||||.=.+++|.
T Consensus 2 Qe~~~Le~E~~~~~erI~~K~~~LqeLi~Q~iaf-knLV~RN~~~e~ 47 (148)
T d2azea1 2 QECQNLEVERQRRLERIKQKQSQLQELILQQIAF-KNLVQRNRHAEQ 47 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHH
Confidence 4566677777777776664444344455554444 678777776664
No 17
>d2fupa1 a.47.5.1 (A:1-130) Hypothetical protein PA3352 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=58.79 E-value=13 Score=28.43 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMNA 119 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElana 119 (393)
|++|++.+++=++-+..-.|.=++.+++.||+...-+..+|....++|+-|.++...
T Consensus 11 L~~e~~~~~~L~~LL~~e~~aL~~~d~~~Le~l~~~k~~ll~~l~~~~~~R~~~l~~ 67 (130)
T d2fupa1 11 FAEDIGHANQLLQLVDEEFQALERRELPVLQQLLGAKQPLMQQLERNGRARAEILRE 67 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444333333344444467899999999999999999999999999998754
No 18
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=58.77 E-value=16 Score=27.22 Aligned_cols=32 Identities=9% Similarity=0.278 Sum_probs=16.8
Q ss_pred hccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016220 85 KKFYNDHLESLQVMEKNYITMATEVEKLRAELM 117 (393)
Q Consensus 85 KK~~~e~~Eq~q~MEKnlisMarEvEKLRaEla 117 (393)
++-..+-......| |=|..+..||+++..+|.
T Consensus 62 ~~d~~~A~~~~~kL-kF~~kl~~ei~~~e~~L~ 93 (95)
T d1fpoa2 62 NETWDAAADTCRKL-RFLDKLRSSAEQLEEKLL 93 (95)
T ss_dssp TTCHHHHHHHHHHH-HHHHHHHHHHHHHHTTTT
T ss_pred hccHHHHHHHHHHh-HHHHHHHHHHHHHHHHhc
Confidence 33333333333333 445556677777777665
No 19
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.31 E-value=18 Score=29.29 Aligned_cols=29 Identities=7% Similarity=0.014 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccchhh
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKKFYNDH 91 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK~~~e~ 91 (393)
+..++..+..+++.....++-.|+.+...
T Consensus 107 ~~~~~~~~~k~l~~~~~~~~k~k~~y~~~ 135 (279)
T d2efka1 107 HFQEGRRAQQQLENGFKQLENSKRKFERD 135 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555566665555555555544433
No 20
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=57.41 E-value=26 Score=26.24 Aligned_cols=55 Identities=5% Similarity=-0.055 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016220 63 FLKIWSKNAITFHLCRGTYEY-EKKFYNDHLESLQVMEKNYITMATEVEKLRAELM 117 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~Ey-EKK~~~e~~Eq~q~MEKnlisMarEvEKLRaEla 117 (393)
|+.++|.||+|...+=..|-- -+...-+++++++.+-+.+-.+-.++..+..+|.
T Consensus 40 l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~ 95 (110)
T d1seta1 40 LKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLE 95 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677777666554444421 1111234555666665555555555555555543
No 21
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=55.17 E-value=3.8 Score=31.59 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=14.9
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhhhh
Q 016220 50 FLHLAFQHCYCAIFLKIWSKNAITFHLCRG 79 (393)
Q Consensus 50 ~~~~~~~~~~~~~l~~Eid~lrqElqr~R~ 79 (393)
+++.-|+| +..++.+|+.|+..+.+++.
T Consensus 4 ~m~~Ff~e--V~~Ir~~I~~i~~~v~~i~~ 31 (124)
T d1ez3a_ 4 FMDEFFEQ--VEEIRGFIDKIAENVEEVKR 31 (124)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 34444555 34456666666665555553
No 22
>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}
Probab=54.04 E-value=36 Score=32.37 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016220 93 ESLQVMEKNYITMATEVEKLRAELMNAPN 121 (393)
Q Consensus 93 Eq~q~MEKnlisMarEvEKLRaElanae~ 121 (393)
+.++.++..|-.+-+|+.+|+.|+...=|
T Consensus 374 ~e~~~l~~~~~~~~~~~~~~~~~~~~~fn 402 (458)
T d2bdea1 374 QEIHDLQLQISTVDLQISRLLQEQNSFYN 402 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44556667777888899999998876433
No 23
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=52.52 E-value=32 Score=23.79 Aligned_cols=20 Identities=15% Similarity=0.232 Sum_probs=7.8
Q ss_pred hhhccchhhHHHHHHHHHHH
Q 016220 83 YEKKFYNDHLESLQVMEKNY 102 (393)
Q Consensus 83 yEKK~~~e~~Eq~q~MEKnl 102 (393)
-||..-.+..+++..|++.|
T Consensus 43 ~~k~kl~~~~~~~~~l~~~l 62 (66)
T d1ivsa1 43 AEEARLKENLEQAERIREAL 62 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444433
No 24
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.25 E-value=8.2 Score=29.14 Aligned_cols=22 Identities=5% Similarity=-0.123 Sum_probs=12.5
Q ss_pred cccCCCchhHHHHHHHHhHHHHH
Q 016220 40 ICESSSPQYYFLHLAFQHCYCAI 62 (393)
Q Consensus 40 ~~e~~~~~~~~~~~~~~~~~~~~ 62 (393)
..||. ..-.+|+..+.|+..++
T Consensus 26 geerk-~~l~~ie~~leEA~ell 47 (89)
T d1vcsa1 26 PDEKK-QMVANVEKQLEEARELL 47 (89)
T ss_dssp TTTHH-HHHHHHHHHHHHHHHHH
T ss_pred chHHH-HHHHHHHHhHHHHHHHH
Confidence 34453 35566777777755444
No 25
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.59 E-value=3.5 Score=36.67 Aligned_cols=21 Identities=5% Similarity=-0.105 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhh
Q 016220 63 FLKIWSKNAITFHLCRGTYEY 83 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~Ey 83 (393)
|..+|+.|++++..++..++.
T Consensus 210 l~~~~~~l~~~l~~~~~~l~~ 230 (332)
T d1v9da_ 210 LQKSLDQMKKQIADVERDVQN 230 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 678888888888888877774
No 26
>d1e52a_ a.2.9.1 (A:) C-terminal UvrC-binding domain of UvrB {Escherichia coli [TaxId: 562]}
Probab=51.55 E-value=12 Score=26.48 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHH
Q 016220 62 IFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYIT 104 (393)
Q Consensus 62 ~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlis 104 (393)
-|...|+.|+++.+.+=..+||||-+. .-.|.+.+++-|+.
T Consensus 14 el~k~i~~Le~~M~~aa~~l~FE~AA~--~RD~I~~l~~~l~~ 54 (56)
T d1e52a_ 14 ALQQKIHELEGLMMQHAQNLEFEEAAQ--IRDQLHQLRELFIA 54 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHh
Confidence 356789999999999999999999865 45677777776654
No 27
>d1vqov1 a.2.2.1 (V:1-65) Ribosomal protein L29 (L29p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=50.14 E-value=3.8 Score=29.52 Aligned_cols=45 Identities=7% Similarity=-0.112 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHH
Q 016220 60 CAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMA 106 (393)
Q Consensus 60 ~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMa 106 (393)
+.-|.++|.+|++||..+|..- =.-+-.++..+.+.+-|++--+-
T Consensus 13 ~~eL~~~l~elk~El~~LR~~q--~~~gql~~~~~ik~~Rk~IARi~ 57 (65)
T d1vqov1 13 PAEREAELDDLKTELLNARAVQ--AAGGAPENPGRIKELRKAIARIK 57 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HTTCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHhCCCCchHHHHHHHHHHHHHH
Confidence 3458999999999999998410 01246677788888877765443
No 28
>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}
Probab=49.76 E-value=3.3 Score=39.94 Aligned_cols=27 Identities=4% Similarity=0.059 Sum_probs=13.1
Q ss_pred HHHHHHHHHHhcCCCCcccCCCCCCCCCCC
Q 016220 107 TEVEKLRAELMNAPNVDRRADGSYGGATGN 136 (393)
Q Consensus 107 rEvEKLRaElanae~~~~~~gg~Yg~~~g~ 136 (393)
.++++++.|+...... ....|+..+|+
T Consensus 381 ~~~~~~~~~~~~~~~~---~~~~fn~~~Gs 407 (458)
T d2bdea1 381 LQISTVDLQISRLLQE---QNSFYNPKWER 407 (458)
T ss_dssp HHHHHHHHHHHHHHHH---HHTTSCTTTCC
T ss_pred HHHHHHHHHHHHHHHH---HHHHhcchhhh
Confidence 3344445555433211 24567777764
No 29
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.65 E-value=22 Score=24.53 Aligned_cols=41 Identities=7% Similarity=0.186 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHH
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKL 112 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKL 112 (393)
|.+.|+.|+.=|..||.+.- ++.+..+|.||--+-+|+.+-
T Consensus 4 llqQi~~ik~yI~QAk~a~R---------~dEV~~Le~NLreLq~e~~~q 44 (46)
T d1yzma1 4 LLQQIHNITSFIRQAKAAGR---------MDEVRTLQENLRQLQDEYDQQ 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc---------hHHHHHHHHHHHHHHHHHHhh
Confidence 56789999999999998753 556778899998888887664
No 30
>d1sumb_ a.7.12.1 (B:) PhoU homolog TM1734 {Thermotoga maritima [TaxId: 2336]}
Probab=48.16 E-value=20 Score=29.24 Aligned_cols=26 Identities=12% Similarity=0.013 Sum_probs=16.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHH
Q 016220 87 FYNDHLESLQVMEKNYITMATEVEKL 112 (393)
Q Consensus 87 ~~~e~~Eq~q~MEKnlisMarEvEKL 112 (393)
.+.++.++...+|+.+..|-+||++.
T Consensus 36 ~D~~~a~~V~~~d~~Id~l~~~I~~~ 61 (225)
T d1sumb_ 36 RNESLAREVIADEEVVDQMEVEIQEK 61 (225)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 35566666667777777777666553
No 31
>d2f1ka1 a.100.1.12 (A:166-279) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=47.97 E-value=15 Score=28.26 Aligned_cols=25 Identities=8% Similarity=-0.068 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhc
Q 016220 62 IFLKIWSKNAITFHLCRGTYEYEKK 86 (393)
Q Consensus 62 ~l~~Eid~lrqElqr~R~a~EyEKK 86 (393)
.|.+.|+.+++||+++|.+|+-+..
T Consensus 71 ~i~~~l~~~~~~L~~l~~~l~~~d~ 95 (114)
T d2f1ka1 71 ALLKSLQDYRQHLDQLITLISNQQW 95 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 3678899999999999999976653
No 32
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=47.47 E-value=27 Score=26.37 Aligned_cols=13 Identities=0% Similarity=-0.396 Sum_probs=4.8
Q ss_pred HHHHHHHHHHhhh
Q 016220 66 IWSKNAITFHLCR 78 (393)
Q Consensus 66 Eid~lrqElqr~R 78 (393)
|++.++++|+.++
T Consensus 11 eV~~Ir~~I~~i~ 23 (124)
T d1ez3a_ 11 QVEEIRGFIDKIA 23 (124)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 33
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=47.39 E-value=33 Score=31.38 Aligned_cols=56 Identities=7% Similarity=0.047 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016220 64 LKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMNAPN 121 (393)
Q Consensus 64 ~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElanae~ 121 (393)
...++.|++++.-+...+|.-+....+.+ .+.+++.|..+..++++|..++.-...
T Consensus 64 Ve~~~~l~~~leDl~eL~Ela~ee~deel--~~e~~~~l~~l~~~l~~le~~ll~~~~ 119 (362)
T d1gqea_ 64 VDTLDQMKQGLEDVSGLLELAVEADDEET--FNEAVAELDALEEKLAQLEFRRMFSGE 119 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHH--HHHHHHHHHHHHHHHHHHGGGGGCCST
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHH--HHHHHHHHHHHhhhhhHHHHhhcccCc
Confidence 45566666666666666665443333322 234555566777777877766654433
No 34
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.73 E-value=8.9 Score=30.89 Aligned_cols=13 Identities=8% Similarity=0.051 Sum_probs=5.1
Q ss_pred HHHHHHhhhhhhh
Q 016220 70 NAITFHLCRGTYE 82 (393)
Q Consensus 70 lrqElqr~R~a~E 82 (393)
.|+.+...|..++
T Consensus 151 ~rk~~d~~~~~~~ 163 (237)
T d2d4ca1 151 HLKKLEGRRLDFD 163 (237)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333444443333
No 35
>d2g5ca1 a.100.1.12 (A:201-310) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=45.57 E-value=9.2 Score=29.44 Aligned_cols=27 Identities=7% Similarity=-0.075 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 016220 60 CAIFLKIWSKNAITFHLCRGTYEYEKK 86 (393)
Q Consensus 60 ~~~l~~Eid~lrqElqr~R~a~EyEKK 86 (393)
+..|.+.|+.++++|.++|.+|+-+.+
T Consensus 67 ~~~i~~~l~~~~~~L~~~~~~l~~~D~ 93 (110)
T d2g5ca1 67 KENVMKAIEGFEKSLNHLKELIVREAE 93 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 344688999999999999999976654
No 36
>d2gycw1 a.2.2.1 (W:1-60) Ribosomal protein L29 (L29p) {Escherichia coli [TaxId: 562]}
Probab=45.49 E-value=15 Score=25.74 Aligned_cols=45 Identities=7% Similarity=-0.161 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHH
Q 016220 60 CAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMAT 107 (393)
Q Consensus 60 ~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMar 107 (393)
..-|.++|+.|++||..+|-.-- -+..++..+.+.+-|++--+-.
T Consensus 11 ~~eL~~~l~~l~~el~~lRfq~~---~gql~~~~~i~~~Rk~IARi~T 55 (60)
T d2gycw1 11 VEELNTELLNLLREQFNLRMQAA---SGQLQQSHLLKQVRRDVARVKT 55 (60)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSTT---TCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HCCCCchHHHHHHHHHHHHHHH
Confidence 34589999999999999995443 3457777888887777654433
No 37
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.83 E-value=30 Score=28.33 Aligned_cols=14 Identities=21% Similarity=0.375 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHH
Q 016220 102 YITMATEVEKLRAE 115 (393)
Q Consensus 102 lisMarEvEKLRaE 115 (393)
+-.|-+||++|+.+
T Consensus 286 ~~~l~~ei~~Lk~~ 299 (300)
T d1f5na1 286 SRIMKNEIQDLQTK 299 (300)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 44455555555544
No 38
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.75 E-value=28 Score=26.80 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=10.1
Q ss_pred HHHHHHHHHhhhhhhhhhhccc
Q 016220 67 WSKNAITFHLCRGTYEYEKKFY 88 (393)
Q Consensus 67 id~lrqElqr~R~a~EyEKK~~ 88 (393)
|+..++|++.+|..||.-+...
T Consensus 140 l~~ae~~~~~a~~~fe~~~~~~ 161 (200)
T d1i4da_ 140 LESAQATFQAHRDKYEKLRGDV 161 (200)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555555443333
No 39
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=43.99 E-value=12 Score=29.04 Aligned_cols=51 Identities=12% Similarity=0.124 Sum_probs=29.0
Q ss_pred HHHHHHHHhhhhhh-hhhhccch-hhHHHHHHHHHHHHH---HHHHHHHHHHHHhc
Q 016220 68 SKNAITFHLCRGTY-EYEKKFYN-DHLESLQVMEKNYIT---MATEVEKLRAELMN 118 (393)
Q Consensus 68 d~lrqElqr~R~a~-EyEKK~~~-e~~Eq~q~MEKnlis---MarEvEKLRaElan 118 (393)
..+++=|+|+|..+ +||.|.+. +..++....-+.|.. =+.++|+|...|.+
T Consensus 49 ~aV~~~l~Ra~~~L~~ye~kL~l~~k~~~~~~~~~~l~~~~~~~e~l~~~i~~l~~ 104 (106)
T d1xsva_ 49 QAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLED 104 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 45566677777666 67888776 444443222222222 24567777777654
No 40
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=43.39 E-value=5.8 Score=27.90 Aligned_cols=18 Identities=22% Similarity=0.137 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 016220 101 NYITMATEVEKLRAELMN 118 (393)
Q Consensus 101 nlisMarEvEKLRaElan 118 (393)
||-.|-+|||.||.|+.-
T Consensus 1 ~i~q~rk~VeqLr~e~~~ 18 (54)
T d1gg2g_ 1 SIAQARKLVEQLKMEANI 18 (54)
T ss_dssp CHHHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHhCC
Confidence 466788999999999863
No 41
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.92 E-value=36 Score=26.15 Aligned_cols=9 Identities=0% Similarity=-0.267 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q 016220 66 IWSKNAITF 74 (393)
Q Consensus 66 Eid~lrqEl 74 (393)
+|+.+..++
T Consensus 50 ~i~~~~~~~ 58 (196)
T d1fioa_ 50 SLDNFVAQA 58 (196)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 42
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=40.53 E-value=20 Score=32.87 Aligned_cols=12 Identities=17% Similarity=0.365 Sum_probs=5.6
Q ss_pred HHHHHHHHHHhc
Q 016220 107 TEVEKLRAELMN 118 (393)
Q Consensus 107 rEvEKLRaElan 118 (393)
.++|+||.++.+
T Consensus 320 ~~Le~lr~~le~ 331 (387)
T d1qvra2 320 HRLDEVRREIEL 331 (387)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344445554443
No 43
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.93 E-value=19 Score=25.70 Aligned_cols=7 Identities=43% Similarity=0.244 Sum_probs=3.1
Q ss_pred HHHHHHh
Q 016220 51 LHLAFQH 57 (393)
Q Consensus 51 ~~~~~~~ 57 (393)
|..|++.
T Consensus 42 L~~A~~y 48 (79)
T d1nlwa_ 42 LTKAKLH 48 (79)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 44
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=39.51 E-value=9.4 Score=30.56 Aligned_cols=56 Identities=9% Similarity=0.049 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 016220 62 IFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMNAPN 121 (393)
Q Consensus 62 ~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElanae~ 121 (393)
-|+..++.++.++..+++.++-.+.+. .+....++.|..+..+++.++++|..++.
T Consensus 50 ~~~~~l~~a~a~~~~a~~~~~r~~~l~----~~~~~~~~~~~~~~~~~~~a~~~l~~a~~ 105 (237)
T d1vf7a_ 50 TYEADYQSAQANLASTQEQAQRYKLLV----ADQAVSKQQYADANAAYLQSKAAVEQARI 105 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----HTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhhhhhhhhhhhhhhhhhh----hccccccchhhhhhhhcchhHHHHHHHhh
Confidence 356677777777777777666554433 33334455666666777777777766543
No 45
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=39.17 E-value=60 Score=23.05 Aligned_cols=50 Identities=12% Similarity=0.056 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016220 66 IWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAE 115 (393)
Q Consensus 66 Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaE 115 (393)
++..+..++..+...+...+....++-++...+++.+--|-.+++.|...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 173 (185)
T d2ap3a1 124 AYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNYKKLKEVSDKYTKV 173 (185)
T ss_dssp HHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444333333333334444555555555554444444433
No 46
>d1h2vc3 a.118.1.14 (C:481-790) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.39 E-value=12 Score=34.05 Aligned_cols=50 Identities=8% Similarity=0.002 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccch-----hhHHHHHHHHHHHHHHHHHHHHH
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKKFYN-----DHLESLQVMEKNYITMATEVEKL 112 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK~~~-----e~~Eq~q~MEKnlisMarEvEKL 112 (393)
++.||+.++..+.+.+..-..+..... ..-|+++.||+.|-.+-.|.++|
T Consensus 175 ~~~ele~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~Le~a~~eqk~L 229 (310)
T d1h2vc3 175 IQKELEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNL 229 (310)
T ss_dssp HHHHHHHC-----------------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 577777777766654322111111110 11234556666666666665544
No 47
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=37.00 E-value=18 Score=34.20 Aligned_cols=48 Identities=13% Similarity=-0.028 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016220 64 LKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMN 118 (393)
Q Consensus 64 ~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElan 118 (393)
+.|++.|++|++.+...++.=+| .|...+.+- -.|..|+++|..+..+
T Consensus 439 ~le~~kL~~E~~~l~~ei~eL~~----iL~s~~~l~---~~i~~EL~~lk~kfg~ 486 (493)
T d1ab4a_ 439 GLEHEKLLDEYKELLDQIAELLR----ILGSADRLM---EVIREELELVREQFGD 486 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----HHHCHHHHH---HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HhCCHHHHH---HHHHHHHHHHHHHhCC
Confidence 56777777777655544322111 111111111 1345788999888875
No 48
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=36.38 E-value=35 Score=31.12 Aligned_cols=23 Identities=17% Similarity=0.096 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhc
Q 016220 64 LKIWSKNAITFHLCRGTYEYEKK 86 (393)
Q Consensus 64 ~~Eid~lrqElqr~R~a~EyEKK 86 (393)
..||+.|++++..++...+-||+
T Consensus 288 e~el~~lee~~~~L~~~w~~ek~ 310 (387)
T d1qvra2 288 EAEIAKLTEEIAKLRAEWERERE 310 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444443
No 49
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.35 E-value=55 Score=22.99 Aligned_cols=28 Identities=14% Similarity=0.122 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016220 91 HLESLQVMEKNYITMATEVEKLRAELMN 118 (393)
Q Consensus 91 ~~Eq~q~MEKnlisMarEvEKLRaElan 118 (393)
..+.++.|++....+-.-+++-|..|.+
T Consensus 77 I~~~~~~l~~rw~~l~~~~~~r~~~L~d 104 (105)
T d1s35a2 77 IKEKVQLIEDRHRKNNEKAQEASVLLRD 104 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3445556666666666666666666643
No 50
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.26 E-value=19 Score=26.14 Aligned_cols=13 Identities=15% Similarity=-0.123 Sum_probs=6.0
Q ss_pred HHHHHHHHhHHHH
Q 016220 49 YFLHLAFQHCYCA 61 (393)
Q Consensus 49 ~~~~~~~~~~~~~ 61 (393)
..|..+|.+|+++
T Consensus 19 ~~in~~f~~Lr~l 31 (88)
T d1nkpa_ 19 NELKRSFFALRDQ 31 (88)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 3444455554433
No 51
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}
Probab=35.96 E-value=45 Score=25.16 Aligned_cols=38 Identities=8% Similarity=-0.234 Sum_probs=31.8
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 016220 47 QYYFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYE 84 (393)
Q Consensus 47 ~~~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyE 84 (393)
+.+.|+.++++.+..+-..|+..|.+.++.+|.+++-+
T Consensus 36 ~i~~~e~~L~e~~~~L~~~e~~~i~~~i~~l~~~l~~~ 73 (112)
T d1u00a1 36 VLESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGD 73 (112)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHhHhhCCHHHHHHHHHHHHHHHHHHHCC
Confidence 66778888888887767899999999999999998743
No 52
>d1joya_ a.30.2.1 (A:) EnvZ histidine kinase {Escherichia coli [TaxId: 562]}
Probab=35.33 E-value=25 Score=24.17 Aligned_cols=31 Identities=0% Similarity=-0.155 Sum_probs=20.8
Q ss_pred cCCCchhHHHHHHHHhHHHHH--HHHHHHHHHH
Q 016220 42 ESSSPQYYFLHLAFQHCYCAI--FLKIWSKNAI 72 (393)
Q Consensus 42 e~~~~~~~~~~~~~~~~~~~~--l~~Eid~lrq 72 (393)
|....+..+|..+.-|||-.. ++..+|.|..
T Consensus 7 ~~~~~~~~f~~~vsHeLRTPLt~i~~~~e~l~~ 39 (67)
T d1joya_ 7 QLADDRTLLMAGVSHDLRTPLTRIRLATEMMSE 39 (67)
T ss_dssp SSSSSHHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhh
Confidence 333446677788888888776 5677776654
No 53
>d1rw6a_ a.47.4.1 (A:) CAPPD, an extracellular domain of amyloid beta A4 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.25 E-value=60 Score=27.74 Aligned_cols=43 Identities=7% Similarity=0.005 Sum_probs=23.6
Q ss_pred ccc-ccccCCCchhHHHHHHHHhHH--H-HHHHHHHHHHHHHHHhhhhh
Q 016220 36 GHP-WICESSSPQYYFLHLAFQHCY--C-AIFLKIWSKNAITFHLCRGT 80 (393)
Q Consensus 36 ~h~-l~~e~~~~~~~~~~~~~~~~~--~-~~l~~Eid~lrqElqr~R~a 80 (393)
.|+ ++||.+. +.+.+..+.|-. + ..++.||+.+..-.+-++.+
T Consensus 7 ~~~~~~~Eh~~--f~~Ak~rLee~hr~k~~~VmkeW~eaE~~~~~l~k~ 53 (192)
T d1rw6a_ 7 ETPGDENEHAH--FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKA 53 (192)
T ss_dssp HTTSCSSSSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred CCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 445 8888864 333333333321 1 22567777777666666666
No 54
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.63 E-value=86 Score=23.49 Aligned_cols=65 Identities=5% Similarity=-0.081 Sum_probs=32.0
Q ss_pred HHHHHHHHhHHHHH--HHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016220 49 YFLHLAFQHCYCAI--FLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELM 117 (393)
Q Consensus 49 ~~~~~~~~~~~~~~--l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaEla 117 (393)
-++..+.+||+..+ |+..|+.|.+-+.-..+--+.= +...+-+.+++ +-+-.+-.+|..++.+|.
T Consensus 38 ~e~~~~~~eL~~~l~siewdL~dLe~av~~ve~np~kf-~l~~~ei~~Rr---~fi~~~~~~I~~~~~~l~ 104 (106)
T d1lvfa_ 38 EEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKF-NLDATELSIRK---AFITSTRQIVRDMKDQMS 104 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSGGGG-TCCHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCHHhc-CCCHHHHHHHH---HHHHHHHHHHHHHHHHHh
Confidence 46667778877665 5666666665555332111000 11222233332 233445556666666664
No 55
>d1wrda1 a.7.8.1 (A:215-307) Target of Myb protein 1, TOM1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.48 E-value=27 Score=25.93 Aligned_cols=49 Identities=2% Similarity=0.042 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhh---------hhccchhhHHHHHHHHHHHHHHHHHHH
Q 016220 62 IFLKIWSKNAITFHLCRGTYEY---------EKKFYNDHLESLQVMEKNYITMATEVE 110 (393)
Q Consensus 62 ~l~~Eid~lrqElqr~R~a~Ey---------EKK~~~e~~Eq~q~MEKnlisMarEvE 110 (393)
.|+.|||.++.=+.-+...+.. +...-.|++++-+.|...++.++.+++
T Consensus 5 kl~~eLe~v~~n~~lL~eML~~~~p~~~~~~d~eli~eL~~~C~~~q~~i~~li~~~~ 62 (93)
T d1wrda1 5 KLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIA 62 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3455555555544444444432 233445678888999999999888763
No 56
>d256ba_ a.24.3.1 (A:) Cytochrome b562 {Escherichia coli [TaxId: 562]}
Probab=34.43 E-value=41 Score=25.58 Aligned_cols=13 Identities=15% Similarity=0.133 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHH
Q 016220 100 KNYITMATEVEKL 112 (393)
Q Consensus 100 KnlisMarEvEKL 112 (393)
..|+.|...|++|
T Consensus 66 d~L~~~ld~i~~l 78 (106)
T d256ba_ 66 DILVGQIDDALKL 78 (106)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4466666666555
No 57
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=34.22 E-value=7.4 Score=30.78 Aligned_cols=16 Identities=13% Similarity=0.333 Sum_probs=7.6
Q ss_pred HHHHHHHHHhhhhhhh
Q 016220 67 WSKNAITFHLCRGTYE 82 (393)
Q Consensus 67 id~lrqElqr~R~a~E 82 (393)
++..++++.+++..++
T Consensus 113 r~~~~~dyd~~~~~l~ 128 (217)
T d1urua_ 113 RNRKLIDYDGQRHSFQ 128 (217)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444544444443
No 58
>d1r73a_ a.2.2.1 (A:) Ribosomal protein L29 (L29p) {Thermotoga maritima [TaxId: 2336]}
Probab=33.82 E-value=61 Score=22.79 Aligned_cols=49 Identities=4% Similarity=-0.037 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHH
Q 016220 60 CAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEK 111 (393)
Q Consensus 60 ~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEK 111 (393)
..-|.++|+.|++||..+|-.. .-+..++-.+++.+-|++--+-..+-.
T Consensus 11 ~~eL~~~l~~l~~el~~LRfq~---~~gql~~~~~i~~~Rk~IARi~Tvl~e 59 (66)
T d1r73a_ 11 DEELKNLLEEKKRQLMELRFQL---AMGQLKNTSLIKLTKRDIARIKTILRE 59 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---HHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3458999999999999999543 346677888888888887666555443
No 59
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=33.70 E-value=23 Score=28.94 Aligned_cols=18 Identities=11% Similarity=0.146 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 016220 102 YITMATEVEKLRAELMNA 119 (393)
Q Consensus 102 lisMarEvEKLRaElana 119 (393)
.-.+..||++|+.||-+-
T Consensus 53 r~ai~~E~~~l~~ei~~i 70 (395)
T d1io1a_ 53 LDSIQAEITQRLNEIDRV 70 (395)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344567888888887653
No 60
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.66 E-value=22 Score=25.77 Aligned_cols=13 Identities=15% Similarity=0.232 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHH
Q 016220 101 NYITMATEVEKLR 113 (393)
Q Consensus 101 nlisMarEvEKLR 113 (393)
.+..|..+|+.|+
T Consensus 74 ~~~~L~~~l~~L~ 86 (88)
T d1nkpa_ 74 RREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 3334445555543
No 61
>d1u2ma_ f.48.1.1 (A:) Periplasmic chaperon skp (HlpA) {Escherichia coli [TaxId: 562]}
Probab=32.93 E-value=16 Score=27.81 Aligned_cols=7 Identities=0% Similarity=0.078 Sum_probs=4.5
Q ss_pred eeeccch
Q 016220 17 FTCTLDF 23 (393)
Q Consensus 17 ~~~~~d~ 23 (393)
+|+.||+
T Consensus 5 KIa~Vd~ 11 (143)
T d1u2ma_ 5 KIAIVNM 11 (143)
T ss_dssp TEEEECH
T ss_pred eeEeeeH
Confidence 5666776
No 62
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=32.92 E-value=46 Score=30.40 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=8.4
Q ss_pred HHHHHHHHHHhcCC
Q 016220 107 TEVEKLRAELMNAP 120 (393)
Q Consensus 107 rEvEKLRaElanae 120 (393)
.|+++|..+|...+
T Consensus 98 ~~l~~l~~~l~~le 111 (362)
T d1gqea_ 98 AELDALEEKLAQLE 111 (362)
T ss_dssp HHHHHHHHHHHHHG
T ss_pred HHHHHHhhhhhHHH
Confidence 35566776666554
No 63
>d1ek8a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Escherichia coli [TaxId: 562]}
Probab=31.83 E-value=55 Score=27.10 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=34.6
Q ss_pred ccccCCCchhHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccch----hhHHHHHHHHHHHHHHHHHHH-HHH
Q 016220 39 WICESSSPQYYFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYEKKFYN----DHLESLQVMEKNYITMATEVE-KLR 113 (393)
Q Consensus 39 l~~e~~~~~~~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyEKK~~~----e~~Eq~q~MEKnlisMarEvE-KLR 113 (393)
|+.||-.+|.-.++..+.++ |.++|..+....++|+.+. -+|..-- ...+++|.+=+++|.-+.++- +-.
T Consensus 105 lT~E~R~elvK~~k~~~E~~-kv~iR~iRr~~~~~ik~~~----k~~~iseD~~k~~~~~iq~ltd~~~~~id~~~~~Ke 179 (185)
T d1ek8a_ 105 LTEERRKDLTKIVRGEAEQA-RVAVRNVRRDANDKVKALL----KDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKE 179 (185)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhc----ccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77787544444444433333 3455555555555555432 1111111 123456666666665444432 223
Q ss_pred HHHh
Q 016220 114 AELM 117 (393)
Q Consensus 114 aEla 117 (393)
.||.
T Consensus 180 keil 183 (185)
T d1ek8a_ 180 AELM 183 (185)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 4554
No 64
>d2bzba1 a.30.7.1 (A:1-54) Hypothetical protein BAS1536 {Bacillus anthracis [TaxId: 1392]}
Probab=31.55 E-value=22 Score=25.26 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=24.3
Q ss_pred hhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 016220 81 YEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELMNAP 120 (393)
Q Consensus 81 ~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaElanae 120 (393)
||--|+.-++++++---=....+++.+||.||=--+.+-.
T Consensus 10 IE~KK~ELi~LV~~yGf~H~KVl~~SqelDkLIN~~m~~k 49 (54)
T d2bzba1 10 IENKKKELIQLVARHGLDHDKVLLFSRDLDKLINKFMNVK 49 (54)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3333333344444333334457899999999988877653
No 65
>d1jnra1 a.7.3.1 (A:503-643) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.52 E-value=43 Score=26.63 Aligned_cols=29 Identities=17% Similarity=0.127 Sum_probs=18.1
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCC
Q 016220 91 HLESLQVME-KNYITMATEVEKLRAELMNAPN 121 (393)
Q Consensus 91 ~~Eq~q~ME-KnlisMarEvEKLRaElanae~ 121 (393)
+-|-++++| +||+..|+=| +++=|+-.|.
T Consensus 63 ~~~l~~a~El~nml~~A~~i--~~sAL~R~ES 92 (141)
T d1jnra1 63 LHELMRAWELVHRVWTAEAH--VRHMLFRKET 92 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHhhcccc
Confidence 335567888 8888888655 4455554443
No 66
>d2piha1 a.281.1.1 (A:2-124) Uncharacterized protein YmcA {Bacillus subtilis [TaxId: 1423]}
Probab=31.23 E-value=99 Score=23.20 Aligned_cols=45 Identities=9% Similarity=-0.110 Sum_probs=23.8
Q ss_pred hhccccccccCCCchhHHHHHHHHhHHH----HHHHHHHHHHHHHHHhhhh
Q 016220 33 LHFGHPWICESSSPQYYFLHLAFQHCYC----AIFLKIWSKNAITFHLCRG 79 (393)
Q Consensus 33 ~h~~h~l~~e~~~~~~~~~~~~~~~~~~----~~l~~Eid~lrqElqr~R~ 79 (393)
+|.+=..|++. ..+..++.|.+.|+. ..|..|+..+++|++.+..
T Consensus 12 A~eL~~~I~~s--~ey~~~~~a~~~v~~d~ea~~li~~f~~~q~~~q~~q~ 60 (123)
T d2piha1 12 ARNLAKMISET--EEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKH 60 (123)
T ss_dssp HHHHHHHHTTB--HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC--HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444456665 345555555544432 1245666666667766543
No 67
>d2zjrv1 a.2.2.1 (V:1-66) Ribosomal protein L29 (L29p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=31.09 E-value=35 Score=24.17 Aligned_cols=47 Identities=9% Similarity=-0.072 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHH
Q 016220 60 CAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEV 109 (393)
Q Consensus 60 ~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEv 109 (393)
..-|.++|+.|+.||..+|-.- .-+-.++-.+.+.+-|++--+-..+
T Consensus 11 ~~eL~~~l~~lk~elf~LRfq~---~tgql~n~~~ik~~Rk~IARi~Tvl 57 (66)
T d2zjrv1 11 ATDFAKEIDARKKELMELRFQA---AAGQLAQPHRVRQLRREVAQLNTVK 57 (66)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHCCCcchHHHHHHHHHHHHHHHHH
Confidence 3458899999999999999433 2356778888888888766555444
No 68
>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.98 E-value=61 Score=29.05 Aligned_cols=23 Identities=4% Similarity=-0.045 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEK 85 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEK 85 (393)
|..+|..|+..+..++..++.-+
T Consensus 296 l~~~~~~L~~~l~~i~~~~~~~~ 318 (411)
T d1ux5a_ 296 LVNDCKDFSQSIVNVERSVEIGN 318 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 57777777777777777665433
No 69
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.62 E-value=49 Score=23.56 Aligned_cols=22 Identities=5% Similarity=0.099 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 016220 96 QVMEKNYITMATEVEKLRAELM 117 (393)
Q Consensus 96 q~MEKnlisMarEvEKLRaEla 117 (393)
+.++..+..+-+|.+.|+.+|.
T Consensus 57 ~~l~~~~~~l~~~~~~L~~~l~ 78 (83)
T d1nkpb_ 57 HTHQQDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555566666654
No 70
>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]}
Probab=29.10 E-value=9 Score=36.73 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=52.6
Q ss_pred ccccccCCCc---hhHHHHHHHHhH------------HHHHHHHHHHHHHHHHHhh-hhhhhhhhccc------------
Q 016220 37 HPWICESSSP---QYYFLHLAFQHC------------YCAIFLKIWSKNAITFHLC-RGTYEYEKKFY------------ 88 (393)
Q Consensus 37 h~l~~e~~~~---~~~~~~~~~~~~------------~~~~l~~Eid~lrqElqr~-R~a~EyEKK~~------------ 88 (393)
++|+-||.=+ |.++|+++.+=. -+..++.-|+.++.|-.|- ++.+-+++...
T Consensus 123 ~p~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~~~~Av~~il~~~~~eq~~~~~s~Y~F~R~~~~~tdTl~~~G~G 202 (426)
T d2nvpa1 123 SPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFNDDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLG 202 (426)
T ss_dssp CTTEEECCCCHHHHHHHHHHHHHHHHHHCCCSSCCHHHHHHHHHHHHHHHHGGGHHHHCCCCCBCCSCSSSCCCSSSSSC
T ss_pred CCceeEeehhhhhhHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHhccCCCCCCCCcceecCCCCCcCccCCCcC
Confidence 4588888644 456666654321 1223566677777666553 55566655322
Q ss_pred --------------------------------hhhHHHHHHHHHHH---HHHHHHHHHHHHHHhcC
Q 016220 89 --------------------------------NDHLESLQVMEKNY---ITMATEVEKLRAELMNA 119 (393)
Q Consensus 89 --------------------------------~e~~Eq~q~MEKnl---isMarEvEKLRaElana 119 (393)
+--|+++..|-+.+ -.+|+|+++|+.||..+
T Consensus 203 ~pv~~tGli~S~FRPSDDac~y~ylIPsNmfa~v~L~~l~ei~~~~~~~~~la~~~~~la~eI~~g 268 (426)
T d2nvpa1 203 TPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLREEIDNA 268 (426)
T ss_dssp SCCCCSSSCCCSBCTTSCBCSSSCBHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCceecCcCCCccccccCCCChHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 23567777776655 57899999999999754
No 71
>d1dd5a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermotoga maritima [TaxId: 2336]}
Probab=28.83 E-value=70 Score=26.39 Aligned_cols=38 Identities=5% Similarity=-0.235 Sum_probs=19.6
Q ss_pred ccccCCCchhHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 016220 39 WICESSSPQYYFLHLAFQHCYCAIFLKIWSKNAITFHLC 77 (393)
Q Consensus 39 l~~e~~~~~~~~~~~~~~~~~~~~l~~Eid~lrqElqr~ 77 (393)
++.||-.+|.-.++..+.++| ..+|.-.....++|+..
T Consensus 104 lT~E~R~elvK~~k~~~E~aK-v~iR~iR~~~~~~lk~~ 141 (184)
T d1dd5a_ 104 PTTEQREKWVKKAKEIVEEGK-IAIRNIRREILKKIKED 141 (184)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 777875555555555554433 34554444444444443
No 72
>d1wmib1 a.137.13.1 (B:7-67) Hypothetical protein PHS014 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.77 E-value=17 Score=25.80 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhc
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKK 86 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK 86 (393)
+..||+.|+-||||+-+.+--|.+
T Consensus 3 vlkelerlkveiqrleamlmpeer 26 (61)
T d1wmib1 3 VLKELERLKVEIQRLEAMLMPEER 26 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhCchhc
Confidence 357899999999999988765544
No 73
>d2a0ba_ a.24.10.1 (A:) Aerobic respiration control sensor protein, ArcB {Escherichia coli [TaxId: 562]}
Probab=28.27 E-value=87 Score=22.68 Aligned_cols=25 Identities=8% Similarity=-0.152 Sum_probs=14.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhhhh
Q 016220 56 QHCYCAIFLKIWSKNAITFHLCRGT 80 (393)
Q Consensus 56 ~~~~~~~l~~Eid~lrqElqr~R~a 80 (393)
++|++++-...++.+++..++++..
T Consensus 40 ~~l~~a~~~~d~~~~~~~aH~LKgs 64 (118)
T d2a0ba_ 40 SVLESNLTAQDKKGIVEEGHKIKGA 64 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3444455555666666666666654
No 74
>d1ei7a_ a.24.5.1 (A:) Tobacco mosaic virus coat protein {Tobacco mosaic virus, vulgare strain [TaxId: 12242]}
Probab=28.14 E-value=35 Score=28.67 Aligned_cols=36 Identities=8% Similarity=-0.123 Sum_probs=31.2
Q ss_pred cCCCchhHHHHHHHHhHHHHH--HHHHHHHHHHHHHhh
Q 016220 42 ESSSPQYYFLHLAFQHCYCAI--FLKIWSKNAITFHLC 77 (393)
Q Consensus 42 e~~~~~~~~~~~~~~~~~~~~--l~~Eid~lrqElqr~ 77 (393)
+-+.+-+.|+..|+|-+-.+. ++.+|+.|-.||.++
T Consensus 98 n~~nPtTaE~lnATqRvDDATvAir~~I~nL~~~L~~G 135 (158)
T d1ei7a_ 98 NQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRG 135 (158)
T ss_dssp CTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCchHHHHhhhhcchhHHHHHHHHHHHHHHHHhcc
Confidence 445688999999999987765 699999999999997
No 75
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=27.71 E-value=29 Score=26.98 Aligned_cols=60 Identities=8% Similarity=-0.108 Sum_probs=28.9
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016220 49 YFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAELM 117 (393)
Q Consensus 49 ~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaEla 117 (393)
.+|....--||-.+.--....|.+..+.+..++ ..+++| .++.-+-.+-.|++.|+.+|.
T Consensus 72 ~~~~~~aH~LKGss~~lGa~~l~~~~~~lE~~~------~~~~~~---~~~~~~~~L~~e~~~l~~~L~ 131 (142)
T d1yvia1 72 DKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFC------QDKSRD---GCLMALAVVRNDFYDLRNKFQ 131 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HTTCHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHhhccHHHHHHHHHHHHHHH------HcCCHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 355555555555554444444444433333333 222222 233445555666666666664
No 76
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.65 E-value=42 Score=23.95 Aligned_cols=13 Identities=0% Similarity=-0.345 Sum_probs=6.1
Q ss_pred HHHHHHHHhHHHH
Q 016220 49 YFLHLAFQHCYCA 61 (393)
Q Consensus 49 ~~~~~~~~~~~~~ 61 (393)
..|...|.+|+.+
T Consensus 19 ~~in~~~~~L~~l 31 (80)
T d1am9a_ 19 SSINDKIIELKDL 31 (80)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 3444555554443
No 77
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica [TaxId: 6192]}
Probab=27.19 E-value=83 Score=23.78 Aligned_cols=22 Identities=0% Similarity=-0.212 Sum_probs=15.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh
Q 016220 57 HCYCAIFLKIWSKNAITFHLCR 78 (393)
Q Consensus 57 ~~~~~~l~~Eid~lrqElqr~R 78 (393)
++++.++...+++|++++.++-
T Consensus 8 ~~~vD~i~~~~~Dl~~~~~~~~ 29 (136)
T d2fhea1 8 RARVSMIEGAAVDLRQGISRIS 29 (136)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667788888888886653
No 78
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.17 E-value=39 Score=23.17 Aligned_cols=32 Identities=9% Similarity=-0.131 Sum_probs=18.7
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhh
Q 016220 48 YYFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTY 81 (393)
Q Consensus 48 ~~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~ 81 (393)
..-|..|++.++ .|+.+++.|.+|+..+|...
T Consensus 25 a~iL~~Ai~YI~--~Lq~~~~~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 25 SGVLRKAIDYIK--YLQQVNHKLRQENMVLKLAN 56 (61)
T ss_dssp TTHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 334566666543 36666666666666666543
No 79
>d1eh1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermus thermophilus [TaxId: 274]}
Probab=27.07 E-value=85 Score=25.87 Aligned_cols=37 Identities=5% Similarity=-0.144 Sum_probs=18.6
Q ss_pred ccccCCCchhHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Q 016220 39 WICESSSPQYYFLHLAFQHCYCAIFLKIWSKNAITFHL 76 (393)
Q Consensus 39 l~~e~~~~~~~~~~~~~~~~~~~~l~~Eid~lrqElqr 76 (393)
++.||-.+|.-.++..+.++| ..||..+.....+|+.
T Consensus 106 lT~E~R~elvK~~k~~~E~ak-v~iR~iR~~~~~~ikk 142 (185)
T d1eh1a_ 106 LTEERRKDLVRAVRQYAEEGR-VAIRNIRREALDKLKK 142 (185)
T ss_dssp CCTTHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 778875444444444444433 3445555555555554
No 80
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.97 E-value=1.2e+02 Score=23.67 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHhhhh
Q 016220 64 LKIWSKNAITFHLCRG 79 (393)
Q Consensus 64 ~~Eid~lrqElqr~R~ 79 (393)
+..+|..+..+.++|.
T Consensus 152 rk~~d~~~~~~~~~~~ 167 (237)
T d2d4ca1 152 LKKLEGRRLDFDYKKK 167 (237)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4455555555555554
No 81
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.85 E-value=1.2e+02 Score=25.56 Aligned_cols=46 Identities=9% Similarity=-0.130 Sum_probs=25.8
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc---chhhHHHHH
Q 016220 47 QYYFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYEKKF---YNDHLESLQ 96 (393)
Q Consensus 47 ~~~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyEKK~---~~e~~Eq~q 96 (393)
+.-+++.++++|+. |+.|++.|..|.++..-.+| +|. +.-++++++
T Consensus 24 ~~~~~~~~i~~L~~--iQ~e~~~l~~e~~~e~~~le--~k~~~~~~ply~~R~ 72 (222)
T d2e50a1 24 SEKEQQEAIEHIDE--VQNEIDRLNEQASEEILKVE--QKYNKLRQPFFQKRS 72 (222)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH--HHHHHHhhhHHHHHH
Confidence 44556666666654 56677777777665444433 332 234555553
No 82
>d1ek9a_ f.5.1.1 (A:) Integral outer membrane protein TolC, efflux pump component {Escherichia coli [TaxId: 562]}
Probab=26.52 E-value=1.7e+02 Score=24.29 Aligned_cols=57 Identities=7% Similarity=-0.035 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccchhhHH---HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKKFYNDHLE---SLQVMEKNYITMATEVEKLRAELMNA 119 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK~~~e~~E---q~q~MEKnlisMarEvEKLRaElana 119 (393)
+++.++.+++.+...+..++.-.-...|.++ ++..++.+++..-++++..+.+|...
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~G~~~~~d~~~a~~~~~~~~~~l~~a~~~~~~~~~~L~~l 185 (428)
T d1ek9a_ 126 TQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANELTARNNLDNAVEQLRQI 185 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHhhhhcchhhhhhhhhhhhHHHHhhhhhhhHHHHHHHHHHHH
Confidence 3555555555555555555544444444443 23456777777777788777777643
No 83
>d1wqga1 d.67.3.1 (A:2-184) Ribosome recycling factor, RRF {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.95 E-value=92 Score=25.58 Aligned_cols=69 Identities=14% Similarity=-0.011 Sum_probs=30.3
Q ss_pred ccccCCCchhHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHH
Q 016220 39 WICESSSPQYYFLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATE 108 (393)
Q Consensus 39 l~~e~~~~~~~~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarE 108 (393)
|+.||-.+|.-.++..+.+ -|..+|........+|+.+...=+.-+-......+++|.|=+.+|.-+.|
T Consensus 104 lT~E~R~elvK~ak~~~E~-aKv~iRniR~~~~~~lk~~~k~~~iseD~~~~~~~~iq~ltd~~~~~id~ 172 (183)
T d1wqga1 104 LTEERRRELVKQAKHKGEE-AKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDE 172 (183)
T ss_dssp CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778744333333333333 23445555555555555544221111111112234555555555544433
No 84
>d1ef1c_ a.137.5.1 (C:) Moesin tail domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.65 E-value=18 Score=27.89 Aligned_cols=41 Identities=15% Similarity=-0.086 Sum_probs=27.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHH
Q 016220 50 FLHLAFQHCYCAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLE 93 (393)
Q Consensus 50 ~~~~~~~~~~~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~E 93 (393)
+-++++.--|...|+..|..|++||.-+|- -+|++..+.+.
T Consensus 18 E~eR~~~~ek~k~lq~qL~~L~~EL~~~kd---~~K~T~~D~iH 58 (90)
T d1ef1c_ 18 EEERTTEAEKNERVQKHLKALTSELANARD---ESKKTANDMIH 58 (90)
T ss_dssp GGGCCCHHHHCHHHHHHHHHHHHHHHTTBC---TTCCCHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhc---ccccChHHHHH
Confidence 333444444567788899999999988873 46666655544
No 85
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.33 E-value=46 Score=23.73 Aligned_cols=9 Identities=22% Similarity=-0.027 Sum_probs=4.7
Q ss_pred HHHHHHhHH
Q 016220 51 LHLAFQHCY 59 (393)
Q Consensus 51 ~~~~~~~~~ 59 (393)
|+.|++.++
T Consensus 42 L~~A~~yI~ 50 (83)
T d1nkpb_ 42 LDKATEYIQ 50 (83)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555543
No 86
>d1ek9a_ f.5.1.1 (A:) Integral outer membrane protein TolC, efflux pump component {Escherichia coli [TaxId: 562]}
Probab=25.20 E-value=1.6e+02 Score=24.36 Aligned_cols=24 Identities=0% Similarity=-0.093 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhc
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKK 86 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK 86 (393)
++..|+..++.+..++..++..++
T Consensus 337 ~~~~i~~~~~~~~~a~~~~~~~~~ 360 (428)
T d1ek9a_ 337 SISSINAYKQAVVSAQSSLDAMEA 360 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555544444
No 87
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=24.51 E-value=11 Score=27.38 Aligned_cols=21 Identities=10% Similarity=-0.202 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhh
Q 016220 63 FLKIWSKNAITFHLCRGTYEY 83 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~Ey 83 (393)
+..||..|++|..+||.+..|
T Consensus 64 ~~~ei~~L~~En~~Lk~~~~~ 84 (89)
T d2jn6a1 64 EAEQIRQLKKENALQRARTRH 84 (89)
T ss_dssp THHHHHHHHHCGGGGGGTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999998887766
No 88
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.40 E-value=1.3e+02 Score=22.18 Aligned_cols=24 Identities=4% Similarity=0.245 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q 016220 95 LQVMEKNYITMATEVEKLRAELMN 118 (393)
Q Consensus 95 ~q~MEKnlisMarEvEKLRaElan 118 (393)
++.+|+++-.+-.|+++|+.+|..
T Consensus 81 i~~l~~q~~~l~~~l~~~~~~l~~ 104 (107)
T d1fxka_ 81 EKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666666666654
No 89
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.19 E-value=78 Score=23.45 Aligned_cols=11 Identities=18% Similarity=0.114 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q 016220 97 VMEKNYITMAT 107 (393)
Q Consensus 97 ~MEKnlisMar 107 (393)
.+++.|..+..
T Consensus 90 ~l~~~l~~~~~ 100 (107)
T d1fxka_ 90 RVMKKLQEMQV 100 (107)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 90
>d2gsqa1 a.45.1.1 (A:76-202) Class sigma GST {Squid (Ommastrephes sloani pacificus) [TaxId: 6634]}
Probab=24.12 E-value=1.1e+02 Score=21.32 Aligned_cols=52 Identities=15% Similarity=-0.072 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016220 59 YCAIFLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVMEKNYITMATEVEKLRAEL 116 (393)
Q Consensus 59 ~~~~l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~MEKnlisMarEvEKLRaEl 116 (393)
++-++...++++..++....-..+.+++. ..+.+++.+-.+...++++-.++
T Consensus 11 ~id~~~~~~~d~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~ 62 (127)
T d2gsqa1 11 RVDEITETLQDIFNDVVKIKFAPEAAKEA------VQQNYEKSCKRLAPFLEGLLVSN 62 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHH------HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcchhhhH------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455667778888887776655444332 23445556655556666655544
No 91
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.98 E-value=55 Score=22.32 Aligned_cols=26 Identities=8% Similarity=0.086 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016220 93 ESLQVMEKNYITMATEVEKLRAELMN 118 (393)
Q Consensus 93 Eq~q~MEKnlisMarEvEKLRaElan 118 (393)
+..+.|++-.-.|..|+++||.++..
T Consensus 33 ~YI~~Lq~~~~~L~~e~~~L~~~~~~ 58 (61)
T d1uklc_ 33 DYIKYLQQVNHKLRQENMVLKLANQK 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677777778899999998864
No 92
>d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]}
Probab=23.73 E-value=1.1e+02 Score=25.23 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhh-ccchhhHHHHHHHHHHHHHHHHHHHH
Q 016220 64 LKIWSKNAITFHLCRGTYEYEK-KFYNDHLESLQVMEKNYITMATEVEK 111 (393)
Q Consensus 64 ~~Eid~lrqElqr~R~a~EyEK-K~~~e~~Eq~q~MEKnlisMarEvEK 111 (393)
..++..|-+|++.+=..+--+. .+|-++.++-+..-.+++.-+.||.+
T Consensus 109 ~~~~~~~vqe~~~~ake~~~~l~E~n~kl~~~~K~~~~e~~kq~~evq~ 157 (166)
T d1eq1a_ 109 QAAVQTTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDFVKHAEEVQK 157 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCSSCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555554422221111 13444445555555555554444443
No 93
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=22.75 E-value=44 Score=25.29 Aligned_cols=15 Identities=0% Similarity=-0.150 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHhh
Q 016220 63 FLKIWSKNAITFHLC 77 (393)
Q Consensus 63 l~~Eid~lrqElqr~ 77 (393)
|+.+|+.|++++.++
T Consensus 13 l~~~l~~l~~~i~~l 27 (133)
T d1fxkc_ 13 YQSQVELIQQQMEAV 27 (133)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 94
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio parahaemolyticus [TaxId: 670]}
Probab=22.60 E-value=1e+02 Score=25.36 Aligned_cols=38 Identities=5% Similarity=-0.142 Sum_probs=17.6
Q ss_pred ccccCCCchhHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 016220 39 WICESSSPQYYFLHLAFQHCYCAIFLKIWSKNAITFHLC 77 (393)
Q Consensus 39 l~~e~~~~~~~~~~~~~~~~~~~~l~~Eid~lrqElqr~ 77 (393)
|+.||-.+|.-.++.-+.++ |..+|.......++|..+
T Consensus 105 lT~E~R~elvK~~k~~~E~a-kv~iRniRr~~~~~ikk~ 142 (185)
T d1is1a_ 105 LTEERRKDLVKIVRGEAEGG-RVAVRNIRRDANNDLKAL 142 (185)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence 77777443333333333332 234554444444445443
No 95
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=22.56 E-value=22 Score=29.14 Aligned_cols=15 Identities=0% Similarity=-0.155 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHhh
Q 016220 63 FLKIWSKNAITFHLC 77 (393)
Q Consensus 63 l~~Eid~lrqElqr~ 77 (393)
|..||+.|++||.|.
T Consensus 56 i~~E~~~l~~ei~~i 70 (395)
T d1io1a_ 56 IQAEITQRLNEIDRV 70 (395)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666666666664
No 96
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.34 E-value=64 Score=24.52 Aligned_cols=18 Identities=11% Similarity=0.110 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 016220 101 NYITMATEVEKLRAELMN 118 (393)
Q Consensus 101 nlisMarEvEKLRaElan 118 (393)
=|-...+-|+.|+.||..
T Consensus 64 eL~~sN~kL~~L~~eL~e 81 (86)
T d1cxzb_ 64 LLRGSSRRLDLLHQQLQE 81 (86)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555566666666653
No 97
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=22.31 E-value=39 Score=29.61 Aligned_cols=66 Identities=5% Similarity=-0.025 Sum_probs=37.6
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHhhhhhhh-hhhc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016220 53 LAFQHCYCAIFLKIWSKNAITFHLCRGTYE-YEKK-FYNDHLESLQVMEKNYITMATEVEKLRAELMN 118 (393)
Q Consensus 53 ~~~~~~~~~~l~~Eid~lrqElqr~R~a~E-yEKK-~~~e~~Eq~q~MEKnlisMarEvEKLRaElan 118 (393)
++.+++....+.++++.++++|.++|-+-- ...- ......+..+.++...+.+.+|++..+.+|+.
T Consensus 33 ~~a~~~~~~~~~~~l~~~~~~l~~~RPta~~L~n~~~~~~~~~~~~~~~~~a~~~~~~~~~a~~~i~~ 100 (274)
T d1vb5a_ 33 TLAEELDESLLEDAIMELREEVVKVNPSMASLYNLARFIPVTNRRDILKSRALEFLRRMEEAKRELAS 100 (274)
T ss_dssp HHHHHSCTTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHSCCCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHHHHHHhCccHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333443344456778888888888886311 1100 01123344556667777777777777776654
No 98
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.30 E-value=47 Score=23.42 Aligned_cols=15 Identities=20% Similarity=0.286 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHH
Q 016220 102 YITMATEVEKLRAEL 116 (393)
Q Consensus 102 lisMarEvEKLRaEl 116 (393)
+..+.+|++.|+.+|
T Consensus 63 ~~~L~~~~~~L~~~l 77 (79)
T d1nlwa_ 63 IDQLQREQRHLKRQL 77 (79)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 334444444444444
No 99
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=22.23 E-value=83 Score=23.62 Aligned_cols=24 Identities=21% Similarity=0.407 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016220 93 ESLQVMEKNYITMATEVEKLRAEL 116 (393)
Q Consensus 93 Eq~q~MEKnlisMarEvEKLRaEl 116 (393)
++++.++..+..|..++++|.+-+
T Consensus 109 ~~~~~~~~~i~~l~~~~~~l~~a~ 132 (133)
T d1fxkc_ 109 ENLRAITDIMMKLSPQAEELLAAV 132 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444555666666667777666543
No 100
>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga maritima [TaxId: 2336]}
Probab=22.15 E-value=77 Score=24.80 Aligned_cols=13 Identities=0% Similarity=-0.204 Sum_probs=5.0
Q ss_pred HHHHHhhhhhhhh
Q 016220 71 AITFHLCRGTYEY 83 (393)
Q Consensus 71 rqElqr~R~a~Ey 83 (393)
+++++.+.+.||-
T Consensus 5 ~~~v~~a~s~Idv 17 (149)
T d2etda1 5 EQEVQEKYSQIQN 17 (149)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 101
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=21.99 E-value=1.3e+02 Score=22.09 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016220 93 ESLQVMEKNYITMATEVEKL 112 (393)
Q Consensus 93 Eq~q~MEKnlisMarEvEKL 112 (393)
++++.+|+.+-.+-.|+..|
T Consensus 78 ~~i~~le~~~~~~~~~l~~~ 97 (110)
T d1seta1 78 EEAKRLEEALREKEARLEAL 97 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444333333
No 102
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.92 E-value=1.1e+02 Score=23.94 Aligned_cols=29 Identities=21% Similarity=0.123 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016220 90 DHLESLQVMEKNYITMATEVEKLRAELMN 118 (393)
Q Consensus 90 e~~Eq~q~MEKnlisMarEvEKLRaElan 118 (393)
++-|+++.+|+-|+...+|.|+|-..|.+
T Consensus 95 ~Le~E~~~~~~el~~~v~e~e~ll~~i~~ 123 (129)
T d1ykhb1 95 MLQKKLVEVEDEKIEAIKKKEKLMRHVDS 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555677777777777777777766653
No 103
>d1mswd_ e.8.1.3 (D:) T7 RNA polymerase {Bacteriophage T7 [TaxId: 10760]}
Probab=21.72 E-value=90 Score=31.17 Aligned_cols=58 Identities=9% Similarity=-0.089 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhh-hhhccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHh
Q 016220 60 CAIFLKIWSKNAITFHLCRGTYE-YEKKFYNDHLESLQVMEK-NYITMATEVEKLRAELM 117 (393)
Q Consensus 60 ~~~l~~Eid~lrqElqr~R~a~E-yEKK~~~e~~Eq~q~MEK-nlisMarEvEKLRaEla 117 (393)
..-++.|.|.+.+.+.|.|..+| .++++.+...-..|.+=. -|--|+.+|++...++.
T Consensus 33 ~rQ~~LE~ea~~~g~~R~r~~~e~~~~rg~~s~~~~g~~li~~~l~~l~~~I~~~~~~~~ 92 (882)
T d1mswd_ 33 REQLALEHESYEMGEARFRKMFERQLKAGEVADNAAAKPLITTLLPKMIARINDWFEEVK 92 (882)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCGGGSTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666777777766655 455556655555555433 34446667766555554
No 104
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.18 E-value=35 Score=31.89 Aligned_cols=37 Identities=0% Similarity=-0.153 Sum_probs=20.8
Q ss_pred HHHHHHHHHhhhhhh-h-hhhccchhhHHHHHHHHHHHH
Q 016220 67 WSKNAITFHLCRGTY-E-YEKKFYNDHLESLQVMEKNYI 103 (393)
Q Consensus 67 id~lrqElqr~R~a~-E-yEKK~~~e~~Eq~q~MEKnli 103 (393)
+|..++|+...+.-| | +..++-.|+.+|+.++|+.|-
T Consensus 323 ~~~w~~E~~~i~~~f~~~~g~~LP~el~~eL~~Lk~RL~ 361 (363)
T d1khba1 323 KEFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRIS 361 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Confidence 344555555555555 2 456666666666666665553
No 105
>d3b8oa1 d.58.60.1 (A:55-319) Lipopolysaccharide biosynthesis protein WzzE {Escherichia coli [TaxId: 562]}
Probab=20.62 E-value=46 Score=28.81 Aligned_cols=30 Identities=3% Similarity=-0.239 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccchhhHH
Q 016220 64 LKIWSKNAITFHLCRGTYEYEKKFYNDHLE 93 (393)
Q Consensus 64 ~~Eid~lrqElqr~R~a~EyEKK~~~e~~E 93 (393)
...+..|+++++..+....-+++.++++|+
T Consensus 146 ~~~~~~l~~~~~~~~~~ak~~~~~~I~~L~ 175 (265)
T d3b8oa1 146 AARTIQMKAQVKRQEEVAKAIYDRRMNSIE 175 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555555555555555555555544
No 106
>d1r9da_ c.7.1.1 (A:) Glycerol dehydratase DhaB1 {Clostridium butyricum [TaxId: 1492]}
Probab=20.38 E-value=77 Score=31.79 Aligned_cols=37 Identities=3% Similarity=-0.248 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHH
Q 016220 63 FLKIWSKNAITFHLCRGTYEYEKKFYNDHLESLQVME 99 (393)
Q Consensus 63 l~~Eid~lrqElqr~R~a~EyEKK~~~e~~Eq~q~ME 99 (393)
|+..|+.|.+|++....+++.+--..+++.|-.++|-
T Consensus 172 l~~G~~gii~~~~~~l~~~~~~~~~~~~k~~fy~a~~ 208 (786)
T d1r9da_ 172 LRVGFNGIINEAKEQLEKNRSIDPDFIKKEKFLNSVI 208 (786)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHH
Confidence 6889999999998888777765333334444444444
Done!