Query 016223
Match_columns 393
No_of_seqs 154 out of 792
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 04:55:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016223.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016223hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06429 GT8_like_1 GT8_like_1 100.0 2.8E-50 6.2E-55 387.5 20.8 228 110-384 1-257 (257)
2 PLN02718 Probable galacturonos 100.0 1.2E-48 2.6E-53 405.0 18.0 271 105-392 309-597 (603)
3 PRK15171 lipopolysaccharide 1, 100.0 2.8E-47 6E-52 379.6 20.5 250 107-386 23-289 (334)
4 PLN02523 galacturonosyltransfe 100.0 3.5E-47 7.6E-52 390.1 20.4 265 105-392 244-553 (559)
5 PLN02769 Probable galacturonos 100.0 8.6E-47 1.9E-51 392.7 19.1 261 105-392 326-624 (629)
6 PLN02659 Probable galacturonos 100.0 3.2E-47 6.9E-52 389.4 15.2 264 105-392 203-527 (534)
7 PLN02870 Probable galacturonos 100.0 8.6E-47 1.9E-51 386.1 16.7 264 105-392 202-526 (533)
8 PLN02742 Probable galacturonos 100.0 3.6E-46 7.8E-51 382.3 20.8 262 105-392 223-529 (534)
9 PLN02867 Probable galacturonos 100.0 1E-45 2.2E-50 379.6 17.0 263 105-391 207-528 (535)
10 cd06431 GT8_LARGE_C LARGE cata 100.0 9.8E-45 2.1E-49 353.2 23.0 256 110-393 3-277 (280)
11 PLN02829 Probable galacturonos 100.0 5.4E-45 1.2E-49 377.3 16.9 262 105-392 327-633 (639)
12 PLN02910 polygalacturonate 4-a 100.0 7.9E-45 1.7E-49 375.5 16.6 262 105-392 341-651 (657)
13 cd00505 Glyco_transf_8 Members 100.0 1.5E-42 3.2E-47 330.8 19.4 230 110-364 1-246 (246)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 2.9E-42 6.3E-47 328.1 19.2 230 110-364 1-248 (248)
15 COG1442 RfaJ Lipopolysaccharid 100.0 3.8E-42 8.2E-47 339.5 20.0 247 109-384 2-262 (325)
16 PF01501 Glyco_transf_8: Glyco 100.0 3.9E-38 8.6E-43 294.7 16.8 236 111-365 1-249 (250)
17 cd06432 GT8_HUGT1_C_like The C 100.0 1.4E-36 3E-41 291.3 17.1 229 110-357 1-239 (248)
18 cd06430 GT8_like_2 GT8_like_2 100.0 1.5E-33 3.3E-38 275.8 22.4 237 110-382 1-272 (304)
19 cd02537 GT8_Glycogenin Glycoge 100.0 2E-30 4.2E-35 247.2 17.4 222 112-384 4-238 (240)
20 PLN00176 galactinol synthase 100.0 1.7E-29 3.7E-34 250.4 19.3 258 110-389 25-297 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.9 3.2E-21 7E-26 187.4 17.1 201 113-365 5-241 (278)
22 KOG1879 UDP-glucose:glycoprote 99.0 3.6E-10 7.8E-15 125.1 7.0 234 105-365 1177-1426(1470)
23 COG5597 Alpha-N-acetylglucosam 98.4 1.9E-07 4.2E-12 91.0 2.5 158 209-381 167-353 (368)
24 PF03407 Nucleotid_trans: Nucl 96.7 0.009 2E-07 55.4 9.4 125 204-358 60-202 (212)
25 PF11051 Mannosyl_trans3: Mann 96.0 0.021 4.5E-07 55.7 7.6 108 112-233 4-114 (271)
26 PLN03182 xyloglucan 6-xylosylt 95.9 0.05 1.1E-06 55.8 9.6 86 280-366 243-366 (429)
27 PLN03181 glycosyltransferase; 93.8 0.24 5.3E-06 51.1 8.2 63 280-342 244-327 (453)
28 PF05637 Glyco_transf_34: gala 91.7 0.11 2.3E-06 50.0 2.3 79 277-357 140-231 (239)
29 KOG1928 Alpha-1,4-N-acetylgluc 77.6 1.1 2.4E-05 45.8 1.3 34 195-232 227-260 (409)
30 PF04488 Gly_transf_sug: Glyco 77.2 17 0.00037 29.8 8.1 30 197-230 67-97 (103)
31 KOG1950 Glycosyl transferase, 76.0 2.3 5E-05 43.3 3.1 149 208-365 123-289 (369)
32 PF05704 Caps_synth: Capsular 68.4 15 0.00032 36.1 6.7 38 190-231 106-143 (276)
33 cd06421 CESA_CelA_like CESA_Ce 65.7 1E+02 0.0022 27.7 11.4 105 110-232 3-108 (234)
34 PF00535 Glycos_transf_2: Glyc 62.2 89 0.0019 25.8 10.9 94 121-235 10-105 (169)
35 PRK15384 type III secretion sy 59.7 3.8 8.3E-05 39.7 0.7 22 212-233 218-239 (336)
36 PRK15383 type III secretion sy 58.5 4.3 9.3E-05 39.3 0.8 22 212-233 221-242 (335)
37 PRK15382 non-LEE encoded effec 58.2 4.4 9.5E-05 39.2 0.8 22 212-233 213-234 (326)
38 cd06434 GT2_HAS Hyaluronan syn 53.5 1.7E+02 0.0037 26.4 12.8 108 110-242 2-110 (235)
39 TIGR03472 HpnI hopanoid biosyn 52.2 2.6E+02 0.0057 28.1 14.5 106 108-231 41-149 (373)
40 PHA03097 C-type lectin-like pr 50.2 20 0.00043 32.2 3.7 33 50-82 23-55 (157)
41 cd04186 GT_2_like_c Subfamily 46.2 1.7E+02 0.0037 24.3 10.6 89 121-232 9-98 (166)
42 cd04190 Chitin_synth_C C-termi 45.8 87 0.0019 29.3 7.6 24 209-232 73-97 (244)
43 TIGR03030 CelA cellulose synth 44.5 4E+02 0.0086 29.7 13.5 118 108-243 131-263 (713)
44 PF07801 DUF1647: Protein of u 43.9 1E+02 0.0022 27.5 7.1 62 105-173 57-118 (142)
45 cd06439 CESA_like_1 CESA_like_ 42.5 2.7E+02 0.0059 25.5 12.8 105 107-232 28-133 (251)
46 PF10111 Glyco_tranf_2_2: Glyc 39.1 3.6E+02 0.0078 25.9 11.7 92 123-231 18-111 (281)
47 smart00528 HNS Domain in histo 37.6 20 0.00043 25.7 1.3 22 63-84 7-28 (46)
48 cd04196 GT_2_like_d Subfamily 36.6 2.8E+02 0.0061 24.3 9.1 90 122-232 11-103 (214)
49 PF13896 Glyco_transf_49: Glyc 34.7 2E+02 0.0044 28.7 8.5 118 107-231 24-149 (317)
50 cd02510 pp-GalNAc-T pp-GalNAc- 33.6 2.9E+02 0.0064 26.5 9.3 101 112-232 2-107 (299)
51 KOG3737 Predicted polypeptide 32.1 2.5E+02 0.0054 29.5 8.6 113 112-242 159-274 (603)
52 COG5486 Predicted metal-bindin 31.2 64 0.0014 31.4 4.0 37 30-66 65-102 (283)
53 PRK11204 N-glycosyltransferase 29.5 6E+02 0.013 25.6 12.6 112 108-242 54-168 (420)
54 PRK05454 glucosyltransferase M 29.0 8.6E+02 0.019 27.2 14.9 122 106-243 122-255 (691)
55 PF03314 DUF273: Protein of un 27.5 49 0.0011 31.6 2.5 29 202-230 34-65 (222)
56 PLN02248 cellulose synthase-li 27.4 3.7E+02 0.0081 31.8 9.8 80 77-162 336-422 (1135)
57 PF15149 CATSPERB: Cation chan 26.8 16 0.00034 38.8 -0.9 45 35-79 483-530 (540)
58 TIGR03111 glyc2_xrt_Gpos1 puta 26.4 5.7E+02 0.012 26.4 10.5 105 107-232 48-155 (439)
59 COG2060 KdpA K+-transporting A 25.3 61 0.0013 34.7 3.0 38 22-66 513-550 (560)
60 PRK11498 bcsA cellulose syntha 24.5 1.1E+03 0.024 27.2 12.9 114 108-243 260-374 (852)
61 cd04185 GT_2_like_b Subfamily 24.4 4.8E+02 0.01 22.8 9.9 100 113-232 3-103 (202)
62 cd04184 GT2_RfbC_Mx_like Myxoc 23.0 5E+02 0.011 22.5 10.0 103 109-232 2-107 (202)
63 PF07214 DUF1418: Protein of u 22.8 33 0.00071 28.6 0.4 28 39-66 34-61 (96)
64 PF03071 GNT-I: GNT-I family; 22.6 6.2E+02 0.013 26.8 9.7 107 119-231 103-213 (434)
65 cd04191 Glucan_BSP_ModH Glucan 22.2 6.9E+02 0.015 23.8 11.0 35 209-243 95-130 (254)
66 cd00761 Glyco_tranf_GTA_type G 22.2 4E+02 0.0086 21.0 11.3 86 121-227 9-95 (156)
67 cd06423 CESA_like CESA_like is 21.3 4.5E+02 0.0098 21.3 10.1 90 122-232 10-102 (180)
68 PF00816 Histone_HNS: H-NS his 20.3 26 0.00055 28.4 -0.7 16 64-79 60-75 (93)
69 TIGR00680 kdpA K+-transporting 20.2 95 0.0021 33.6 3.2 35 24-65 517-551 (563)
No 1
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=2.8e-50 Score=387.50 Aligned_cols=228 Identities=18% Similarity=0.306 Sum_probs=183.0
Q ss_pred eEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC--CCCeEEEechh--hhhhhhhcC
Q 016223 110 VHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP--HSNLEFHGQEE--VKKVIRTAS 185 (393)
Q Consensus 110 I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~--~~~i~v~~~~~--v~~~i~~~~ 185 (393)
+|||+|+| ||+ +++|++.|++.||+++.+++|||++++.+ .+.++++.+..+ +.+|+++..+. ++.......
T Consensus 1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s--~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 76 (257)
T cd06429 1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQN--YGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDS 76 (257)
T ss_pred CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccC--HHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccch
Confidence 69999999 999 79999999999999888999999986553 456666666554 45678887642 211111000
Q ss_pred ---------------CCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccc
Q 016223 186 ---------------TGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLN 250 (393)
Q Consensus 186 ---------------~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~ 250 (393)
+.. ...++.+|+|++||++||+++||||||||+||+|||+|||++||+|+++|||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~--~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d------ 148 (257)
T cd06429 77 LMQLESEADTSNLKQRKP--EYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET------ 148 (257)
T ss_pred hhhhhccccccccccCCc--cccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh------
Confidence 111 123456789999999999999999999999999999999999999999999987
Q ss_pred cccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHHH-HHHHHHHHHHHhhcc---CCCCChHHHHHHh
Q 016223 251 SYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYI-LEAFLWWKKVINQRD---RSIGRSPAIALAL 326 (393)
Q Consensus 251 ~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~-~~~i~~~~~~~~~~~---~~~~DQd~ln~~~ 326 (393)
|||||||||||++||++. ++++++|+++..... ...+|||+||++|
T Consensus 149 ------------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~ 198 (257)
T cd06429 149 ------------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVF 198 (257)
T ss_pred ------------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHc
Confidence 599999999999999765 488999998765432 2347899999999
Q ss_pred ccCeeecCCccccccCCC------CCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhhccccC
Q 016223 327 YDRYLKLSSSWLVTDSTS------SVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLWKQHLP 384 (393)
Q Consensus 327 ~g~~~~L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~Yl~ 384 (393)
+|+++.||.+||+++.+. ...++|+||||+|+.|||+..+. ++ ++++||+|++
T Consensus 199 ~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~-~~----~~~~w~~yl~ 257 (257)
T cd06429 199 YGLTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNGNMKPWLRTAI-PS----YKELWEKYLS 257 (257)
T ss_pred cCeeEECChHHcccCCcccccccccccCCcEEEEECCCCCCcCCCCC-Ch----HHHHHHHHhC
Confidence 999999999999986532 34578999999999999998764 33 8999999984
No 2
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-48 Score=404.98 Aligned_cols=271 Identities=20% Similarity=0.356 Sum_probs=203.9
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC--CCeEEEechhhhh---
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH--SNLEFHGQEEVKK--- 179 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~--~~i~v~~~~~v~~--- 179 (393)
.|.+..||++++|+ |+ +++|+|+|++.|+.+++.++|||+++..+ ...++.+..+.+. ..|+|+..+++..
T Consensus 309 ~d~~~~Hia~~sDN-vl-aasVvInSil~Ns~np~~ivFHVvTD~is--~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~ 384 (603)
T PLN02718 309 NDPDLYHYVVFSDN-VL-ACSVVVNSTISSSKEPEKIVFHVVTDSLN--YPAISMWFLLNPPGKATIQILNIDDMNVLPA 384 (603)
T ss_pred cCCcceeEEEEcCC-ce-eEEEEhhhhhhccCCCCcEEEEEEeCCCC--HHHHHHHHHhCCCCCcEEEEEecchhccccc
Confidence 57889999999997 64 99999999999988888999999987654 4567777766553 4678877654321
Q ss_pred hhh---hcCCCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChh
Q 016223 180 VIR---TASTGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPD 256 (393)
Q Consensus 180 ~i~---~~~~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~ 256 (393)
... ...+...-...++.+|+||+||++||+++||||||+|+||+|||++||++||+|+++|||+||......+...+
T Consensus 385 ~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~ 464 (603)
T PLN02718 385 DYNSLLMKQNSHDPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMD 464 (603)
T ss_pred cchhhhhhccccccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhh
Confidence 000 00011110112356889999999999999999999999999999999999999999999999964221221111
Q ss_pred hhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHHH-HHHHHHHHHHHhhccCCCCChHHHH---HHhccCeee
Q 016223 257 VLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYI-LEAFLWWKKVINQRDRSIGRSPAIA---LALYDRYLK 332 (393)
Q Consensus 257 ~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~-~~~i~~~~~~~~~~~~~~~DQd~ln---~~~~g~~~~ 332 (393)
. .++ .+.+|+.. .|+++.||||+|||||||++||++. ++.+.+|++.... ..+.||++|| ++|+|++++
T Consensus 465 ~--~ln--fs~p~i~~-~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~--~~l~dqdaLpp~LlvF~gri~~ 537 (603)
T PLN02718 465 T--FIN--FSDPWVAK-KFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVK--RPLWKAGSLPIGWLTFYNQTVA 537 (603)
T ss_pred h--hhh--ccchhhhc-ccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhccC--ccccCcccccHHHHHhcCceee
Confidence 0 000 12334433 5777899999999999999999655 5889999976432 2456777765 999999999
Q ss_pred cCCccccccCCC------CCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhhccccCcchhhhhc
Q 016223 333 LSSSWLVTDSTS------SVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLWKQHLPPLFYQMVG 392 (393)
Q Consensus 333 L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~Yl~~~~~~~l~ 392 (393)
||++||+.+.+. ...++|.||||+|+.|||.+.+.+. |+++|.+|++.. +.+|.
T Consensus 538 LD~rWNv~gLG~~~~i~~~~i~~aaIIHYnG~~KPWle~~i~~-----yr~~W~k~v~~~-~~~l~ 597 (603)
T PLN02718 538 LDKRWHVLGLGHESGVGASDIEQAAVIHYDGVMKPWLDIGIGK-----YKRYWNIHVPYH-HPYLQ 597 (603)
T ss_pred cChHHhccCccccccccccccCCCEEEEECCCCCccccCChhh-----HHHHHHhhcCCC-ChHHH
Confidence 999999998753 2568999999999999999986543 899999999965 66654
No 3
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=2.8e-47 Score=379.57 Aligned_cols=250 Identities=16% Similarity=0.185 Sum_probs=183.6
Q ss_pred CCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC--CCeEEEech--hhhhhhh
Q 016223 107 DGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH--SNLEFHGQE--EVKKVIR 182 (393)
Q Consensus 107 ~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~--~~i~v~~~~--~v~~~i~ 182 (393)
.+.||||+|+|++|+++++|+|+||++|+++ ..++|||+..+ ++++++++|+++... .+|+++..+ .++. +
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~--is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~-~- 97 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDY--ISDADKQRFSALAKQYNTRINIYLINCERLKS-L- 97 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCC--CCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhC-C-
Confidence 4789999999999999999999999999876 46999999754 456688888876553 456776653 2221 1
Q ss_pred hcCCCccchhhhHHHhHHHHhhhccC-CCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEE-cccccccccccChhhhHH
Q 016223 183 TASTGVKYSVQNFEEIVPFVIASVHQ-SLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAA-DDCSERLNSYVNPDVLDA 260 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~~r~~LP~l~p-~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv-~D~~~~~~~y~~~~~l~~ 260 (393)
....+++ +..|+|++||++|| +++||||||||+||+|||+|||++||++..+||| .|+.... + ...
T Consensus 98 --~~~~~~s---~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~--~-----~~~ 165 (334)
T PRK15171 98 --PSTKNWT---YATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEW--W-----SKR 165 (334)
T ss_pred --cccCcCC---HHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhH--H-----HHH
Confidence 1223333 45678999999998 6999999999999999999999999996666665 5542110 0 000
Q ss_pred HhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHHHH-HHHHHHHHHHhh-ccCCCCChHHHHHHhccCeeecCCccc
Q 016223 261 IQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYIL-EAFLWWKKVINQ-RDRSIGRSPAIALALYDRYLKLSSSWL 338 (393)
Q Consensus 261 iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~-~~i~~~~~~~~~-~~~~~~DQd~ln~~~~g~~~~L~~~WN 338 (393)
.++. . .+ ....+|||||||||||++||++.+ ++++.++..... .....+|||+||.+|+|+++.||.+||
T Consensus 166 ~~~l---~-~~----~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN 237 (334)
T PRK15171 166 AQSL---Q-TP----GLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYN 237 (334)
T ss_pred HHhc---C-Cc----cccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhC
Confidence 0110 0 00 012359999999999999997654 777776653211 122368999999999999999999999
Q ss_pred cccCC---------CCCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhhccccCcc
Q 016223 339 VTDST---------SSVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLWKQHLPPL 386 (393)
Q Consensus 339 ~~~~~---------~~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~Yl~~~ 386 (393)
++... ....++|+||||+|+.|||+..+. ++ ++++||+|+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~~-~~----~~~~f~~~~~~s 289 (334)
T PRK15171 238 TQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWAD-YP----VSQYFLKAKEAS 289 (334)
T ss_pred CccchhHHHHhcccccccCCCEEEEECCCCCCCCCCCC-Cc----hHHHHHHHHhcC
Confidence 87531 123468999999999999998764 44 689999998864
No 4
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=3.5e-47 Score=390.09 Aligned_cols=265 Identities=17% Similarity=0.342 Sum_probs=197.1
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC--CCCeEEEechhhh--h-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP--HSNLEFHGQEEVK--K- 179 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~--~~~i~v~~~~~v~--~- 179 (393)
.|++..|+++++|+ +.+++|+|+|++.|+++|.++.|||++++.+ ...++.+...-+ +..|+|..+++++ .
T Consensus 244 ~dp~l~Hy~ifSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln--~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~ 319 (559)
T PLN02523 244 EDPSLYHYAIFSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMN--LAAMKVMFKMRDLNGAHVEVKAVEDYKFLNS 319 (559)
T ss_pred cCCCcceEEEecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCC--HHHHHHHHhhCCCCCcEEEEEEeehhhhccc
Confidence 57889999999998 8999999999999999999999999986553 223444433333 3456666654311 0
Q ss_pred -------hhhh------cCC-----------Cccch---hhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhC
Q 016223 180 -------VIRT------AST-----------GVKYS---VQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGI 232 (393)
Q Consensus 180 -------~i~~------~~~-----------~~~~~---~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~ 232 (393)
.+.. .+. ..++. ..+..+|+||+||++||+++|||||||||||+|||++||++
T Consensus 320 ~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~i 399 (559)
T PLN02523 320 SYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKI 399 (559)
T ss_pred ccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhC
Confidence 0100 000 00111 12446889999999999999999999999999999999999
Q ss_pred CCCCCeEEEEccccc---ccccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHH-HHHHHHHHHHH
Q 016223 233 DLSNYAIAAADDCSE---RLNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKY-ILEAFLWWKKV 308 (393)
Q Consensus 233 DL~~~~iAAv~D~~~---~~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~-~~~~i~~~~~~ 308 (393)
||+|+++|||+||.. ++..++++. .+.. ...|+.+.||||+|||||||++||++ +++++..|++
T Consensus 400 DL~gkv~aAVeDc~~~~~r~~~~ln~s----------~p~i-~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~- 467 (559)
T PLN02523 400 DMDGKVNGAVETCFGSFHRYAQYLNFS----------HPLI-KEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQN- 467 (559)
T ss_pred cCCCceEEEehhhhhHHHHHHHhhccc----------chhh-hhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHH-
Confidence 999999999999942 223332221 1111 12467789999999999999999955 5588877765
Q ss_pred HhhccCCCCChHHH---HHHhccCeeecCCccccccCCC------CCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhh
Q 016223 309 INQRDRSIGRSPAI---ALALYDRYLKLSSSWLVTDSTS------SVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLW 379 (393)
Q Consensus 309 ~~~~~~~~~DQd~l---n~~~~g~~~~L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W 379 (393)
++. +..+.||++| |++|+|+++.||++||+.+.+. +..++|.||||+|..|||.+.+. ++ ++++|
T Consensus 468 ln~-~~~l~DqdaLpp~LivF~gri~~LD~rWNvlglGy~~~i~~~~i~~paIIHYnG~~KPWle~~i-~~----yr~~W 541 (559)
T PLN02523 468 LNE-NRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVIHFNGNMKPWLDIAM-NQ----FKPLW 541 (559)
T ss_pred hcc-ccccccccccchHHHHhcCceEecCchhhccCCccCCCccccccCCCEEEEECCCCCccccCCC-Cc----chHHH
Confidence 332 3456888887 5899999999999999987642 35688999999999999998764 32 79999
Q ss_pred ccccCcchhhhhc
Q 016223 380 KQHLPPLFYQMVG 392 (393)
Q Consensus 380 ~~Yl~~~~~~~l~ 392 (393)
|+|+..+ +.+|.
T Consensus 542 ~kYl~~~-~~fl~ 553 (559)
T PLN02523 542 TKYVDYD-MEFVQ 553 (559)
T ss_pred HHHHccC-CHHHH
Confidence 9999965 66553
No 5
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=8.6e-47 Score=392.69 Aligned_cols=261 Identities=20% Similarity=0.330 Sum_probs=200.5
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC-----CCeEEEechhhh-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH-----SNLEFHGQEEVK- 178 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~-----~~i~v~~~~~v~- 178 (393)
.|.+.-|.++-+|+ +..++|+|+|++.|+++|+++.|||+++ ..++..++.||.. .-|+|...+++.
T Consensus 326 ~d~~l~Hy~ifSdN--vlAasvvvNStv~na~~p~~~VFHiVTD-----~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~ 398 (629)
T PLN02769 326 SDPSLRHYVIFSKN--VLAASVVINSTVVHSRESGNIVFHVLTD-----AQNYYAMKHWFDRNSYKEAAVQVLNIEDLIL 398 (629)
T ss_pred cCCccceEEEEecc--ceeeeeehhhhhhhccCccceEEEEecC-----hhhHHHHHHHHhcCCCccceEEEeeeeeeee
Confidence 57788999999887 6799999999999999999999999975 3477888888753 224444332211
Q ss_pred ---------h-----hhhhcCCC-----ccc---hhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCC
Q 016223 179 ---------K-----VIRTASTG-----VKY---SVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSN 236 (393)
Q Consensus 179 ---------~-----~i~~~~~~-----~~~---~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~ 236 (393)
. .+...+.+ ... -..+..+|+||+||++||+++|||||||||||+|||++||++||+|
T Consensus 399 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~g 478 (629)
T PLN02769 399 KDLDKFALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGG 478 (629)
T ss_pred cccchHHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCC
Confidence 0 01110100 000 0134568999999999999999999999999999999999999999
Q ss_pred CeEEEEcccccccccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHHH-HHHHHHHHHHHhhcc--
Q 016223 237 YAIAAADDCSERLNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYI-LEAFLWWKKVINQRD-- 313 (393)
Q Consensus 237 ~~iAAv~D~~~~~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~-~~~i~~~~~~~~~~~-- 313 (393)
+++|||+||..+++.+. .|....+|+++.||||+|||||||++||++. ++.+.+|++++...+
T Consensus 479 kviAAVedc~~rl~~~~--------------~yl~~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~ 544 (629)
T PLN02769 479 KVNGAVQFCGVRLGQLK--------------NYLGDTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEE 544 (629)
T ss_pred CeEEEehhhhhhhhhhh--------------hhhcccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccc
Confidence 99999999965433221 1222345677899999999999999999655 588888888765422
Q ss_pred -CCCCChHHHHHHhccCeeecCCccccccCCC------CCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhhccccCcc
Q 016223 314 -RSIGRSPAIALALYDRYLKLSSSWLVTDSTS------SVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLWKQHLPPL 386 (393)
Q Consensus 314 -~~~~DQd~ln~~~~g~~~~L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~Yl~~~ 386 (393)
...++|+++|++|+|++++||.+||+++.+. ..+++|+||||+|+.|||.+.+. ++ ++++||+|++.+
T Consensus 545 ~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i~~~~i~~paIIHYnG~~KPW~e~~i-~~----yr~~W~kYl~~~ 619 (629)
T PLN02769 545 SLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGIDEQAIKKAAVLHYNGNMKPWLELGI-PK----YKKYWKRFLNRD 619 (629)
T ss_pred cccccCcCHHHHHhcCeEEECCHHHccccccccccccccccCCcEEEEECCCCCCccCCCC-Ch----HHHHHHHHhccC
Confidence 2247899999999999999999999987543 36789999999999999998864 33 899999999965
Q ss_pred hhhhhc
Q 016223 387 FYQMVG 392 (393)
Q Consensus 387 ~~~~l~ 392 (393)
+.+|+
T Consensus 620 -~~fl~ 624 (629)
T PLN02769 620 -DRFMD 624 (629)
T ss_pred -ChHHh
Confidence 66664
No 6
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=3.2e-47 Score=389.37 Aligned_cols=264 Identities=15% Similarity=0.282 Sum_probs=200.3
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC-----CCCeEEEechhhh-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP-----HSNLEFHGQEEVK- 178 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~-----~~~i~v~~~~~v~- 178 (393)
.|.+.-|.++-+|+ +..++|+|+|++.|+++|+++.|||+++. .++..++.+|. ..-|+|...++++
T Consensus 203 ~d~~l~Hy~ifSdN--vLAasVVvnStv~~a~~p~~~VFHivTD~-----~ny~aM~~WF~~n~~~~a~v~V~~~e~f~w 275 (534)
T PLN02659 203 VDNSYFHFVLASDN--ILAASVVANSLVQNALRPHKFVLHIITDR-----KTYSPMQAWFSLHPLSPAIIEVKALHHFDW 275 (534)
T ss_pred CCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCc-----cccHHHHHHHhhCCCccceEEEEeehhccc
Confidence 57788999999887 67999999999999999999999999853 36677777764 2335554433221
Q ss_pred ---------hhhh------hcCC--------Cc-----------cchh---hhHHHhHHHHhhhccCCCCeEEEEeCCee
Q 016223 179 ---------KVIR------TAST--------GV-----------KYSV---QNFEEIVPFVIASVHQSLSKFIYMSPSVI 221 (393)
Q Consensus 179 ---------~~i~------~~~~--------~~-----------~~~~---~~~~~~~r~~LP~l~p~~~KvLYLD~DiI 221 (393)
+.+. ..+. .+ ++.. .+..+|+|++||++||+++||||||||||
T Consensus 276 l~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVV 355 (534)
T PLN02659 276 FAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIV 355 (534)
T ss_pred ccccccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEE
Confidence 1010 0000 00 0111 23468999999999999999999999999
Q ss_pred eeCChHHHHhCCCCCCeEEEEccccc--------ccccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHH
Q 016223 222 VKGRVEELIGIDLSNYAIAAADDCSE--------RLNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARK 293 (393)
Q Consensus 222 V~gdL~eL~~~DL~~~~iAAv~D~~~--------~~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~ 293 (393)
|++||+|||++||+|+++|||+||.. ++..|+++. .+.... .|+.+.||||+|||||||++
T Consensus 356 VqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s----------~p~i~~-yFn~~~cYfNsGVlLINLk~ 424 (534)
T PLN02659 356 VQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFS----------HPLIAK-NFDPNECAWAYGMNIFDLEA 424 (534)
T ss_pred EcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhccc----------chhhhh-ccCccccceecceeEeeHHH
Confidence 99999999999999999999999842 222222211 111112 45667899999999999999
Q ss_pred HHHH-HHHHHHHHHHHHhhccCCCCChHHH---HHHhccCeeecCCccccccCCC------CCCCCcEEEEcCCCCCCCC
Q 016223 294 LEKY-ILEAFLWWKKVINQRDRSIGRSPAI---ALALYDRYLKLSSSWLVTDSTS------SVVNKSLAIRYDGPMTACS 363 (393)
Q Consensus 294 wR~~-~~~~i~~~~~~~~~~~~~~~DQd~l---n~~~~g~~~~L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~ 363 (393)
||++ ++++++.|+++....+..+.|||+| |++|+|++++||.+||+.+.+. .+.++|+||||+|+.|||+
T Consensus 425 WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~~~~~i~~paIIHYnG~~KPW~ 504 (534)
T PLN02659 425 WRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSLADAESAGVVHFNGRAKPWL 504 (534)
T ss_pred HHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCcccccccccccCCcEEEEECCCCCccc
Confidence 9965 4589999998754444556899999 6899999999999999987643 2567999999999999999
Q ss_pred CCCCCCCCCCchHHhhccccCcchhhhhc
Q 016223 364 EFGDGANMEPARGDLWKQHLPPLFYQMVG 392 (393)
Q Consensus 364 ~~~~~~~~~~~~~~~W~~Yl~~~~~~~l~ 392 (393)
+.+.++ ++++|.+|++.+ +.+|+
T Consensus 505 ~~~~~~-----yr~~W~kYl~~s-~~fl~ 527 (534)
T PLN02659 505 DIAFPQ-----LRPLWAKYIDSS-DKFIK 527 (534)
T ss_pred cccCCc-----chhHHHHHhccC-CHHHH
Confidence 998643 899999999965 66654
No 7
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=8.6e-47 Score=386.13 Aligned_cols=264 Identities=19% Similarity=0.315 Sum_probs=203.0
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC-----CCCeEEEechhhh-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP-----HSNLEFHGQEEVK- 178 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~-----~~~i~v~~~~~v~- 178 (393)
.|.+.-|.++-+|+ +..++|+|+|++.|+++|+++.|||+++. .++..++.+|. ..-|+|...++++
T Consensus 202 ~dp~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VFHvvTD~-----~n~~aM~~WF~~n~~~~a~v~V~~~e~f~w 274 (533)
T PLN02870 202 SDNSYHHFVLSTDN--ILAASVVVSSTVQSSLKPEKIVFHVITDK-----KTYAGMHSWFALNSVSPAIVEVKGVHQFDW 274 (533)
T ss_pred cCCcceeEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCc-----cccHHHHHHHhhCCCccceEEEEehhhccc
Confidence 57788999999887 67999999999999999999999999853 36677888774 2335554433321
Q ss_pred -------------------hhhhh-cCC-----C---------ccchh---hhHHHhHHHHhhhccCCCCeEEEEeCCee
Q 016223 179 -------------------KVIRT-AST-----G---------VKYSV---QNFEEIVPFVIASVHQSLSKFIYMSPSVI 221 (393)
Q Consensus 179 -------------------~~i~~-~~~-----~---------~~~~~---~~~~~~~r~~LP~l~p~~~KvLYLD~DiI 221 (393)
..+.. ... + .++.. .+..+|+||+||++||+++||||||||||
T Consensus 275 l~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVV 354 (533)
T PLN02870 275 LTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVV 354 (533)
T ss_pred cccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEE
Confidence 00100 000 0 00111 24468999999999999999999999999
Q ss_pred eeCChHHHHhCCCCCCeEEEEccccc--------ccccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHH
Q 016223 222 VKGRVEELIGIDLSNYAIAAADDCSE--------RLNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARK 293 (393)
Q Consensus 222 V~gdL~eL~~~DL~~~~iAAv~D~~~--------~~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~ 293 (393)
|+|||++||++||+|+++|||+||.. ++..|+|+. .++.. .+|+.+.||||+|||||||++
T Consensus 355 VqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs----------~p~i~-~~fd~~~cyfNSGVlLINL~~ 423 (533)
T PLN02870 355 IQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFS----------HPLIA-KNLDPEECAWAYGMNIFDLRA 423 (533)
T ss_pred ecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccc----------cchhh-cccCcccceeeccchhccHHH
Confidence 99999999999999999999999832 334455532 22222 357778999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHhhccCCCCChHHH---HHHhccCeeecCCccccccCCC------CCCCCcEEEEcCCCCCCCC
Q 016223 294 LEKYI-LEAFLWWKKVINQRDRSIGRSPAI---ALALYDRYLKLSSSWLVTDSTS------SVVNKSLAIRYDGPMTACS 363 (393)
Q Consensus 294 wR~~~-~~~i~~~~~~~~~~~~~~~DQd~l---n~~~~g~~~~L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~ 363 (393)
||++. ++++..|+++....+..+.|||+| |++|+|++++||.+||+.+.+. ...++|+||||+|+.|||+
T Consensus 424 WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~~~~~~i~~aaIIHY~G~~KPW~ 503 (533)
T PLN02870 424 WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSKTNIESVKKAAVIHYNGQSKPWL 503 (533)
T ss_pred HHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCCcccccccccCCcEEEEECCCCCCcc
Confidence 99655 588999997754444457899999 6899999999999999987643 2567899999999999999
Q ss_pred CCCCCCCCCCchHHhhccccCcchhhhhc
Q 016223 364 EFGDGANMEPARGDLWKQHLPPLFYQMVG 392 (393)
Q Consensus 364 ~~~~~~~~~~~~~~~W~~Yl~~~~~~~l~ 392 (393)
+.+.++ ++.+|.+|++.. +.+|+
T Consensus 504 ~~~~~~-----yr~~W~kYl~~s-~~fl~ 526 (533)
T PLN02870 504 EIGFEH-----LRPFWTKYVNYS-NDFIR 526 (533)
T ss_pred ccCccc-----hhHHHHHHHccC-chHhh
Confidence 887533 899999999955 66654
No 8
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=3.6e-46 Score=382.25 Aligned_cols=262 Identities=22% Similarity=0.396 Sum_probs=200.6
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC-----CCeEEEechhhh-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH-----SNLEFHGQEEVK- 178 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~-----~~i~v~~~~~v~- 178 (393)
.|.+.-|.++-+|+ +..++|+|+|+..|+++|+++.|||+++ ..++..++.+|.. ..++|+..+++.
T Consensus 223 ~d~~l~Hy~ifSdN--vlAasvvvnStv~nsk~P~~~VFHiVTD-----~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~w 295 (534)
T PLN02742 223 VDNNLYHFCVFSDN--ILATSVVVNSTVSNAKHPDQLVFHLVTD-----EVNYGAMQAWFAMNDFKGVTVEVQKIEEFSW 295 (534)
T ss_pred cCCCcceEEEEecc--chhhhhhhhhhHhhhcCCCcEEEEEeec-----hhhHHHHHHHHhhCCCCccEEEEEEeccccc
Confidence 57788999999887 7899999999999999999999999985 3467788888752 346666654322
Q ss_pred --h-------hhhh------cCCC--------ccch---hhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhC
Q 016223 179 --K-------VIRT------ASTG--------VKYS---VQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGI 232 (393)
Q Consensus 179 --~-------~i~~------~~~~--------~~~~---~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~ 232 (393)
. .+.. .+.+ .++. ..+..+|+||+||++||+++||||||+|+||+|||++||++
T Consensus 296 l~~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~ 375 (534)
T PLN02742 296 LNASYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSI 375 (534)
T ss_pred cccccchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcC
Confidence 0 0000 0000 0010 12346899999999999999999999999999999999999
Q ss_pred CCCCCeEEEEccccc---ccccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHHHH-HHHHHHHHH
Q 016223 233 DLSNYAIAAADDCSE---RLNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYIL-EAFLWWKKV 308 (393)
Q Consensus 233 DL~~~~iAAv~D~~~---~~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~-~~i~~~~~~ 308 (393)
||+|+++|||+||.. ++.+|+++ +++++.. +|+++.||||+|||||||++||++.+ +.+.+|++.
T Consensus 376 DL~~~viaAVedC~~~f~ry~~yLnf----------S~p~i~~-~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~ 444 (534)
T PLN02742 376 DLHGNVNGAVETCLETFHRYHKYLNF----------SHPLISS-HFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQ 444 (534)
T ss_pred CCCCCEEEEeCchhhhhhhhhhhhcc----------cchhhhc-cCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHh
Confidence 999999999999953 34445443 2344433 67788999999999999999996654 777788864
Q ss_pred HhhccCCCCChH---HHHHHhccCeeecCCccccccCCC------CCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhh
Q 016223 309 INQRDRSIGRSP---AIALALYDRYLKLSSSWLVTDSTS------SVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLW 379 (393)
Q Consensus 309 ~~~~~~~~~DQd---~ln~~~~g~~~~L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W 379 (393)
+. +..+.||+ +++++|+|++++||++||+.+++. ...++|.||||+|+.|||.+.+.++ ++++|
T Consensus 445 -n~-~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v~~~~i~~aaILHynG~~KPWl~~~i~~-----yr~~W 517 (534)
T PLN02742 445 -NV-DRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNIDPRLIESAAVLHFNGNMKPWLKLAIER-----YKPLW 517 (534)
T ss_pred -cc-ccccccccccchHHHHHcCcceecChhheecccccccccchhhccCCeEEEECCCCCcccccCCcc-----cchHH
Confidence 32 23344554 555789999999999999988654 3678999999999999999986543 78999
Q ss_pred ccccCcchhhhhc
Q 016223 380 KQHLPPLFYQMVG 392 (393)
Q Consensus 380 ~~Yl~~~~~~~l~ 392 (393)
++|++.+ +.+|.
T Consensus 518 ~kYl~~s-~~fl~ 529 (534)
T PLN02742 518 ERYVNYS-HPYLQ 529 (534)
T ss_pred HHHHccC-CHHHH
Confidence 9999965 66654
No 9
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=1e-45 Score=379.61 Aligned_cols=263 Identities=19% Similarity=0.345 Sum_probs=198.5
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC-----CCCeEEEechhhh-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP-----HSNLEFHGQEEVK- 178 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~-----~~~i~v~~~~~v~- 178 (393)
.|++.-|.++-+|+ +..++|+|+|++.|+++|+++.|||+++. .++..++.+|. ..-|+|...+++.
T Consensus 207 ~d~~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VfHvvTD~-----~ny~aM~~WF~~n~~~~a~v~V~~~~~f~w 279 (535)
T PLN02867 207 TDPSFHHVVLLTDN--VLAASVVISSTVQNAANPEKLVFHIVTDK-----KTYTPMHAWFAINSIKSAVVEVKGLHQYDW 279 (535)
T ss_pred cCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCc-----cccHHHHHHHhhCCCccceEEEEeehhccc
Confidence 57788999999887 67999999999999999999999999853 36677777764 2345654433221
Q ss_pred ---------hhhhhc-----------------CCCc-----cchh---hhHHHhHHHHhhhccCCCCeEEEEeCCeeeeC
Q 016223 179 ---------KVIRTA-----------------STGV-----KYSV---QNFEEIVPFVIASVHQSLSKFIYMSPSVIVKG 224 (393)
Q Consensus 179 ---------~~i~~~-----------------~~~~-----~~~~---~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~g 224 (393)
+.+... ++.. .... .+..+|+||+||++||+++||||||+||||+|
T Consensus 280 l~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqg 359 (535)
T PLN02867 280 SQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQH 359 (535)
T ss_pred cccccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhhccCeEEEecCCEEEcC
Confidence 000000 0000 0111 24468999999999999999999999999999
Q ss_pred ChHHHHhCCCCCCeEEEEcccc--------cccccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHH
Q 016223 225 RVEELIGIDLSNYAIAAADDCS--------ERLNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEK 296 (393)
Q Consensus 225 dL~eL~~~DL~~~~iAAv~D~~--------~~~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~ 296 (393)
||++||++||+|+++|||.|.. .++.+|+++. .+++ ..+++++.||||+|||||||++||+
T Consensus 360 DLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfs----------np~i-~~~~~p~~cYFNSGVmLINL~~WRe 428 (535)
T PLN02867 360 DLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFS----------HPLI-SSNLDQERCAWLYGMNVFDLKAWRR 428 (535)
T ss_pred chHHHHhCcCCCCeEEEEeccccccccccchhhhhhcccc----------chhh-hccCCCCCcceecceeeeeHHHHHH
Confidence 9999999999999999998742 2234455432 2222 1345678899999999999999996
Q ss_pred HH-HHHHHHHHHHHhhccCCCCChHHHH---HHhccCeeecCCccccccCCC-------CCCCCcEEEEcCCCCCCCCCC
Q 016223 297 YI-LEAFLWWKKVINQRDRSIGRSPAIA---LALYDRYLKLSSSWLVTDSTS-------SVVNKSLAIRYDGPMTACSEF 365 (393)
Q Consensus 297 ~~-~~~i~~~~~~~~~~~~~~~DQd~ln---~~~~g~~~~L~~~WN~~~~~~-------~~~~~p~IIHf~G~~KPW~~~ 365 (393)
+. ++++..|++........+.|||+|| ++|+|++++||.+||+.+.+. +..++|+||||+|+.|||++.
T Consensus 429 ~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~ 508 (535)
T PLN02867 429 TNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPEVPREILESAAVLHFSGPAKPWLEI 508 (535)
T ss_pred hcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccCCCcccccchhhhcCCcEEEEECCCCCccccc
Confidence 55 5889999987544334568898888 499999999999999976532 246799999999999999998
Q ss_pred CCCCCCCCchHHhhccccCcchhhhh
Q 016223 366 GDGANMEPARGDLWKQHLPPLFYQMV 391 (393)
Q Consensus 366 ~~~~~~~~~~~~~W~~Yl~~~~~~~l 391 (393)
+.++ ++++|.+|++-. +.+|
T Consensus 509 ~~~~-----yR~~W~kyl~~~-~~fl 528 (535)
T PLN02867 509 GFPE-----VRSLWYRHVNFS-DKFI 528 (535)
T ss_pred CCCc-----hhHHHHHhcCcc-chHH
Confidence 7643 899999999854 5444
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=9.8e-45 Score=353.19 Aligned_cols=256 Identities=19% Similarity=0.224 Sum_probs=185.2
Q ss_pred eEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC--CCeEEEechhhhhhhhhcCCC
Q 016223 110 VHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH--SNLEFHGQEEVKKVIRTASTG 187 (393)
Q Consensus 110 I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~--~~i~v~~~~~v~~~i~~~~~~ 187 (393)
+-||+|. ++|+++++|+|.||++|+. ..++|||+..+. +++++++|.+.... .+|+++..++..+.+.. .++
T Consensus 3 ~~iv~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~--s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~-~~~ 76 (280)
T cd06431 3 VAIVCAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEI--ARRILATLFQTWMVPAVEVSFYNAEELKSRVSW-IPN 76 (280)
T ss_pred EEEEEcc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCc--CHHHHHHHHHhccccCcEEEEEEhHHhhhhhcc-Ccc
Confidence 5688888 9999999999999999974 459999998654 45678888766543 45666666433333221 133
Q ss_pred ccchhhhHHHhHHHHhhhccC-CCCeEEEEeCCeeeeCChHHHHhC--CCCC-CeEEEEcccccccccccChhhhHHHhh
Q 016223 188 VKYSVQNFEEIVPFVIASVHQ-SLSKFIYMSPSVIVKGRVEELIGI--DLSN-YAIAAADDCSERLNSYVNPDVLDAIQR 263 (393)
Q Consensus 188 ~~~~~~~~~~~~r~~LP~l~p-~~~KvLYLD~DiIV~gdL~eL~~~--DL~~-~~iAAv~D~~~~~~~y~~~~~l~~iq~ 263 (393)
.+++ .+.+|+|++||++|| +++||||||||+||+|||+|||++ |+++ +++|||+|.... |+. +..+
T Consensus 77 ~~~s--~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~---~~~-----~~~~ 146 (280)
T cd06431 77 KHYS--GIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDW---YLG-----NLWK 146 (280)
T ss_pred cchh--hHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhh---hhh-----hhhh
Confidence 3443 344789999999999 799999999999999999999999 7865 477778875321 111 1000
Q ss_pred hcCCCCccCCCCCCCCCcccccccceeHHHHHHHHH-HHHHHHHHHHhh--ccCCCCChHHHHHHhccC---eeecCCcc
Q 016223 264 SASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYIL-EAFLWWKKVINQ--RDRSIGRSPAIALALYDR---YLKLSSSW 337 (393)
Q Consensus 264 ~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~-~~i~~~~~~~~~--~~~~~~DQd~ln~~~~g~---~~~L~~~W 337 (393)
. ..+| .....|||||||||||++||++.+ +++...++++.. ....++|||+||.+|+|+ ++.||.+|
T Consensus 147 ~-~~~~------~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~w 219 (280)
T cd06431 147 N-HRPW------PALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAW 219 (280)
T ss_pred c-cCCC------cccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCcc
Confidence 0 0111 111249999999999999997655 555554443321 123469999999999999 89999999
Q ss_pred ccccCCC-------CCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhhccccCcchhhhhcC
Q 016223 338 LVTDSTS-------SVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLWKQHLPPLFYQMVGR 393 (393)
Q Consensus 338 N~~~~~~-------~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~Yl~~~~~~~l~~ 393 (393)
|++.... ...++|+||||+|+.|||...+..++ ++++|.+|+..+ --.|+|
T Consensus 220 N~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~----~~~~~~~~~~~~-~~~l~~ 277 (280)
T cd06431 220 NVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEF----FRNLYLTFLEYD-GNLLRR 277 (280)
T ss_pred ccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCCCChH----HHHHHHHHHhcC-chhhhh
Confidence 9985311 13468999999999999998776565 999999999876 555543
No 11
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=5.4e-45 Score=377.25 Aligned_cols=262 Identities=22% Similarity=0.420 Sum_probs=196.0
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC-----CCCeEEEechhhh-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP-----HSNLEFHGQEEVK- 178 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~-----~~~i~v~~~~~v~- 178 (393)
.|++.-|.++-+|+ +..++|+|+|++.|+++|+++.|||+++. .++..++.||. ..-|+|..++++.
T Consensus 327 ~dp~l~Hy~ifSdN--VLAasVVVnStv~na~~p~k~VFHivTD~-----~ny~aM~~WF~~n~~~~A~v~V~nie~f~w 399 (639)
T PLN02829 327 EDPQLYHYALFSDN--VLAAAVVVNSTVTNAKHPSKHVFHIVTDR-----LNYAAMRMWFLVNPPGKATIQVQNIEEFTW 399 (639)
T ss_pred cCCccceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCc-----cchHHHHHHHhhCCCccceEEEEehhhccc
Confidence 57788999999887 67999999999999999999999999853 36677887764 2335554433221
Q ss_pred ---------h----------hhhhcC----CCccchh---hhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhC
Q 016223 179 ---------K----------VIRTAS----TGVKYSV---QNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGI 232 (393)
Q Consensus 179 ---------~----------~i~~~~----~~~~~~~---~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~ 232 (393)
+ .+.... +..++.. .+..+|+||+||++||+++|||||||||||+|||++||++
T Consensus 400 ln~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~i 479 (639)
T PLN02829 400 LNSSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSI 479 (639)
T ss_pred ccccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhC
Confidence 0 111100 0011111 2446889999999999999999999999999999999999
Q ss_pred CCCCCeEEEEcccccc---cccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHH-HHHHHHHHHHH
Q 016223 233 DLSNYAIAAADDCSER---LNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKY-ILEAFLWWKKV 308 (393)
Q Consensus 233 DL~~~~iAAv~D~~~~---~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~-~~~~i~~~~~~ 308 (393)
||+|+++|||+||... +..|+++. .+... ..|+...||||+|||||||++||++ ++++++.|++.
T Consensus 480 DL~gkviAAVedc~~~f~r~~~~l~fs----------~p~i~-~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~ 548 (639)
T PLN02829 480 DLKGNVNGAVETCGESFHRFDRYLNFS----------NPLIS-KNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKL 548 (639)
T ss_pred CCCCceEEEeccchhhhhhhhhhhhcc----------chHhh-hccCCcccceecceEEEeHHHHHHhChHHHHHHHHHH
Confidence 9999999999999643 22233221 11111 2456678999999999999999965 45889999975
Q ss_pred HhhccCCCCC---hHHHHHHhccCeeecCCccccccCCCC------CCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhh
Q 016223 309 INQRDRSIGR---SPAIALALYDRYLKLSSSWLVTDSTSS------VVNKSLAIRYDGPMTACSEFGDGANMEPARGDLW 379 (393)
Q Consensus 309 ~~~~~~~~~D---Qd~ln~~~~g~~~~L~~~WN~~~~~~~------~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W 379 (393)
.. +....+ .++++++|+|+++.||++||+.+++.+ .+++|.||||+|..|||.+.+.++ |+++|
T Consensus 549 n~--~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~~~v~~~~i~~aaIIHynG~~KPWle~~i~~-----yr~lW 621 (639)
T PLN02829 549 NH--DRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNPNVNQRDIERAAVIHYNGNMKPWLEIGIPK-----YRNYW 621 (639)
T ss_pred cc--CCccccccCCChHHHHhcCceEecChhheecCCCCCcccchhcccCCeEEEECCCCCccccCCccc-----chHHH
Confidence 32 223344 455566789999999999999987532 578899999999999999987533 89999
Q ss_pred ccccCcchhhhhc
Q 016223 380 KQHLPPLFYQMVG 392 (393)
Q Consensus 380 ~~Yl~~~~~~~l~ 392 (393)
.+|+... +.+|+
T Consensus 622 ~kYl~~~-~~fl~ 633 (639)
T PLN02829 622 SKYVDYD-QVYLR 633 (639)
T ss_pred HHHHhcC-chHHH
Confidence 9999855 66654
No 12
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=7.9e-45 Score=375.53 Aligned_cols=262 Identities=19% Similarity=0.401 Sum_probs=198.7
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC-----CCCeEEEechhhh-
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP-----HSNLEFHGQEEVK- 178 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~-----~~~i~v~~~~~v~- 178 (393)
.|.+.-|.++-+|+ +..++|+|+|++.|+++|+++.|||+++. .++..++.+|. ..-|+|..++++.
T Consensus 341 ~dp~l~Hy~ifSDN--VLAaSVVVnSTv~na~~P~k~VFHiVTD~-----~ny~aM~~WF~~n~~~~A~V~V~nie~f~w 413 (657)
T PLN02910 341 EDPSLYHYAIFSDN--VLATSVVVNSTVLHAKEPQKHVFHIVTDK-----LNFAAMKMWFIINPPAKATIQVENIDDFKW 413 (657)
T ss_pred cCCcceeEEEEecc--eeeEEeehhhhhhcccCccceEEEEecCc-----cccHHHHHHHhhCCCccceEEEeehhhccc
Confidence 57788999999887 67999999999999999999999999853 36677887764 2335554433211
Q ss_pred ---------h----------hhhhcCC--------Cccchh---hhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHH
Q 016223 179 ---------K----------VIRTAST--------GVKYSV---QNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEE 228 (393)
Q Consensus 179 ---------~----------~i~~~~~--------~~~~~~---~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~e 228 (393)
+ .+....+ ..++.. .+..+|+||+||++||+++|||||||||||+|||++
T Consensus 414 ln~~~~pvl~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLse 493 (657)
T PLN02910 414 LNSSYCSVLRQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTP 493 (657)
T ss_pred ccccccHHHHHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHH
Confidence 0 1111000 011111 244689999999999999999999999999999999
Q ss_pred HHhCCCCCCeEEEEcccccc---cccccChhhhHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHHHH-HHHHHH
Q 016223 229 LIGIDLSNYAIAAADDCSER---LNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYI-LEAFLW 304 (393)
Q Consensus 229 L~~~DL~~~~iAAv~D~~~~---~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~-~~~i~~ 304 (393)
||++||+|+++|||+||... +..|+++. .+.+.. .|+.+.||||+|||||||++||++. ++.+..
T Consensus 494 Lw~iDL~g~v~AAVedc~~~f~r~~~ylnfs----------~P~i~~-yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~ 562 (657)
T PLN02910 494 LWSIDMQGMVNGAVETCKESFHRFDKYLNFS----------NPKISE-NFDPNACGWAFGMNMFDLKEWRKRNITGIYHY 562 (657)
T ss_pred HHhCCcCCceEEEecccchhhhhhhhhhccC----------Chhhhh-ccCCCCceeecccEEEeHHHHHHhhHHHHHHH
Confidence 99999999999999999652 33333322 122222 5677899999999999999999655 577777
Q ss_pred HHHHHhhccCCCCChHHHH---HHhccCeeecCCccccccCCC------CCCCCcEEEEcCCCCCCCCCCCCCCCCCCch
Q 016223 305 WKKVINQRDRSIGRSPAIA---LALYDRYLKLSSSWLVTDSTS------SVVNKSLAIRYDGPMTACSEFGDGANMEPAR 375 (393)
Q Consensus 305 ~~~~~~~~~~~~~DQd~ln---~~~~g~~~~L~~~WN~~~~~~------~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~ 375 (393)
|++. +. +..+.||++|| ++|+|++..||++||+.+++. .+.++|.||||+|..|||.+.+.++ |
T Consensus 563 w~el-n~-~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v~~~~i~~AAVLHynG~~KPWl~l~i~~-----Y 635 (657)
T PLN02910 563 WQDL-NE-DRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAIAK-----Y 635 (657)
T ss_pred HHHh-cc-cccccccCCCChHHHHHhCceeecCchheecCCCCCcccccccccCcEEEEeCCCCCcccccCccc-----c
Confidence 8764 33 34466776666 899999999999999998753 2678999999999999999987533 8
Q ss_pred HHhhccccCcchhhhhc
Q 016223 376 GDLWKQHLPPLFYQMVG 392 (393)
Q Consensus 376 ~~~W~~Yl~~~~~~~l~ 392 (393)
+++|.+|+... +.+|+
T Consensus 636 r~~W~kYl~~d-~~fl~ 651 (657)
T PLN02910 636 KPYWSRYVQYD-NPYLQ 651 (657)
T ss_pred hHHHHHHccCC-ChHHH
Confidence 99999999966 66654
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=1.5e-42 Score=330.76 Aligned_cols=230 Identities=17% Similarity=0.158 Sum_probs=168.3
Q ss_pred eEEEEEe-cccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC--CCCeEEEechhhh-hhhhhcC
Q 016223 110 VHIVSWM-QCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP--HSNLEFHGQEEVK-KVIRTAS 185 (393)
Q Consensus 110 I~I~~~~-D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~--~~~i~v~~~~~v~-~~i~~~~ 185 (393)
|||++++ |++|+++++|+|.||++|+++ .++|||++.+. +++++++|+++.. +.+++++..+... .... .
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~i--s~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~--~ 74 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPL--SDTFKAALDNLRKLYNFNYELIPVDILDSVDSE--H 74 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccc--cHHHHHHHHHHHhccCceEEEEeccccCcchhh--h
Confidence 5777555 559999999999999999876 58999998654 5567888887653 4567777653211 1110 0
Q ss_pred CCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhhc
Q 016223 186 TGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRSA 265 (393)
Q Consensus 186 ~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~~ 265 (393)
...++ +...|.|+++|+++|+++||||||||+||++||+|||++|++++.+|||+||......
T Consensus 75 ~~~~~---~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~-------------- 137 (246)
T cd00505 75 LKRPI---KIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREG-------------- 137 (246)
T ss_pred hcCcc---ccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhcc--------------
Confidence 11122 2346789999999999999999999999999999999999999999999998532100
Q ss_pred CCCCccCCCCCCCCCcccccccceeHHHHH-HHHHHHHHHHHHHHhhccCCCCChHHHHHHhccC---eeecCCcccccc
Q 016223 266 SQPWVSGKPYAVNSCMPDLGMLLIDARKLE-KYILEAFLWWKKVINQRDRSIGRSPAIALALYDR---YLKLSSSWLVTD 341 (393)
Q Consensus 266 ~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR-~~~~~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~---~~~L~~~WN~~~ 341 (393)
..+....+.....+|||||||||||++|| ++.++....+..+.. .....+|||+||.+|.++ +..||.+||++.
T Consensus 138 -~~~~~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~-~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~ 215 (246)
T cd00505 138 -KYYRQKRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSL-SSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRL 215 (246)
T ss_pred -chhhcccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhc-ccCccCCcHHHHHHHhcCCCeEEECCCeeeEEe
Confidence 00000112233467999999999999998 555555444332222 223469999999999999 999999999986
Q ss_pred CCC--------CCCCCcEEEEcCCCCCCCCC
Q 016223 342 STS--------SVVNKSLAIRYDGPMTACSE 364 (393)
Q Consensus 342 ~~~--------~~~~~p~IIHf~G~~KPW~~ 364 (393)
... ...++|+||||+|+.|||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 216 TGCYRSLNCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred cCccccccchhhhcCCCEEEEeCCCCCCCCC
Confidence 531 25679999999999999974
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=2.9e-42 Score=328.13 Aligned_cols=230 Identities=20% Similarity=0.198 Sum_probs=177.6
Q ss_pred eEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC--CCCeEEEechhhhhhhhhcC-C
Q 016223 110 VHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP--HSNLEFHGQEEVKKVIRTAS-T 186 (393)
Q Consensus 110 I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~--~~~i~v~~~~~v~~~i~~~~-~ 186 (393)
|||++|+|++|+++++|++.|+++|++. ..++|||++.+ ++++.+++|+++.. +.+|+++..+.- .+.... .
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~--is~~~~~~L~~~~~~~~~~i~~~~i~~~--~~~~~~~~ 75 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDD--ISEENKKKLKELLKKYNSSIEFIKIDND--DFKFFPAT 75 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCC--CCHHHHHHHHHHHHhcCCeEEEEEcCHH--HHhcCCcc
Confidence 6999999999999999999999999886 56899999765 45668889998766 456777765321 111111 1
Q ss_pred CccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhhcC
Q 016223 187 GVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRSAS 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~~~ 266 (393)
..+++ ...|+|+++|+++|+++||||||||+||++||++||++|++++++|||.|+....... . +
T Consensus 76 ~~~~~---~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~-------~--~--- 140 (248)
T cd04194 76 TDHIS---YATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKK-------R--K--- 140 (248)
T ss_pred ccccc---HHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHH-------H--H---
Confidence 22333 3467899999999999999999999999999999999999999999999986431100 0 0
Q ss_pred CCCccCCCCCCCCCcccccccceeHHHHHHHH-HHHHHHHHHHHhhccCCCCChHHHHHHhccCeeecCCccccccCCC-
Q 016223 267 QPWVSGKPYAVNSCMPDLGMLLIDARKLEKYI-LEAFLWWKKVINQRDRSIGRSPAIALALYDRYLKLSSSWLVTDSTS- 344 (393)
Q Consensus 267 ~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~-~~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~~~~L~~~WN~~~~~~- 344 (393)
.........+||||||||||+++||++. .+++++++++.. .....+||++||.+|+|++..||.+||++....
T Consensus 141 ----~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~-~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~ 215 (248)
T cd04194 141 ----RRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYG-GRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYY 215 (248)
T ss_pred ----hhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCC-CceeeCChHHHHHHHhCCeEEcCcccccchhHhH
Confidence 0012233467999999999999999654 578888776643 223469999999999999999999999986522
Q ss_pred -------------CCCCCcEEEEcCCCCCCCCC
Q 016223 345 -------------SVVNKSLAIRYDGPMTACSE 364 (393)
Q Consensus 345 -------------~~~~~p~IIHf~G~~KPW~~ 364 (393)
...++|+||||+|+.|||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 216 LLKKKSKEEQELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred HhhccchhHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence 14678999999999999973
No 15
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.8e-42 Score=339.55 Aligned_cols=247 Identities=19% Similarity=0.201 Sum_probs=184.3
Q ss_pred ceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeE--E--Eechhhhhhhhhc
Q 016223 109 MVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLE--F--HGQEEVKKVIRTA 184 (393)
Q Consensus 109 ~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~--v--~~~~~v~~~i~~~ 184 (393)
.++||+++|+||++++||+|+|+|.|++. -.+.||+++.+. +++++.+|++.....+.. + ...+.++...
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i--~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~~~--- 75 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGL--NEEDKKKLNETAEPFKSFIVLEVIDIEPFLDYP--- 75 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCC--CHHHHHHHHHHHHhhccceeeEEEechhhhccc---
Confidence 58999999999999999999999999985 469999998765 456899999876654432 2 2223333221
Q ss_pred CCCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhh
Q 016223 185 STGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRS 264 (393)
Q Consensus 185 ~~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~ 264 (393)
..+.+++ ++.|+|++||++||+.+|+||||+||||+|||++||.+|++++++|||.|+...... ....+.
T Consensus 76 ~~~~~~s---~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~-------~~~~~~ 145 (325)
T COG1442 76 PFTKRFS---KMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMK-------EGALRL 145 (325)
T ss_pred ccccchH---HHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhh-------hhhhHh
Confidence 0234444 457799999999999999999999999999999999999999999999997532110 001111
Q ss_pred cCCCCccCCCCCCCCCcccccccceeHHHHHHHHH-HHHHHHHHHHhhccCCCCChHHHHHHhccCeeecCCccccccCC
Q 016223 265 ASQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYIL-EAFLWWKKVINQRDRSIGRSPAIALALYDRYLKLSSSWLVTDST 343 (393)
Q Consensus 265 ~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~-~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~~~~L~~~WN~~~~~ 343 (393)
........|||||||++|+++||++.+ +++..+++..+ .....+|||+||.+|+|++..|+.+||++...
T Consensus 146 --------~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~-~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~ 216 (325)
T COG1442 146 --------EKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKE-NDLLYPDQDILNMIFEDRVLELPIRYNAIPYI 216 (325)
T ss_pred --------hhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccc-cccCCccccHHHHHHHhhhhccCcccceeehh
Confidence 001123469999999999999997665 66666554333 23346999999999999999999999999652
Q ss_pred ---------CCCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhhccccC
Q 016223 344 ---------SSVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLWKQHLP 384 (393)
Q Consensus 344 ---------~~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~Yl~ 384 (393)
.....+|.|+||+|+.|||+.++.... ....|.+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~----~~~~w~~i~~ 262 (325)
T COG1442 217 DSQLKDKYIYPFGDDPVILHYAGPTKPWHSDSSNYP----RSHEWHEILA 262 (325)
T ss_pred hhccchhhhccCCCCceEEEecCCCCCCcCcccccc----HHHHHHHHHh
Confidence 235578999999999999999864332 2466655544
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=3.9e-38 Score=294.75 Aligned_cols=236 Identities=18% Similarity=0.237 Sum_probs=159.8
Q ss_pred EEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCC-CeEEEec-h-hh-hhhhhhcCC
Q 016223 111 HIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHS-NLEFHGQ-E-EV-KKVIRTAST 186 (393)
Q Consensus 111 ~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~-~i~v~~~-~-~v-~~~i~~~~~ 186 (393)
||++++|.+|+++++|+++|++.|++++..+.||++..+. +++.+++|++..... .+..+.. . .. .+.......
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDI--SEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPS 78 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS---HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HC
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCC--CHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccc
Confidence 7999999999999999999999999876678899887654 456788898877653 3332222 1 11 110000011
Q ss_pred CccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhhcC
Q 016223 187 GVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRSAS 266 (393)
Q Consensus 187 ~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~~~ 266 (393)
..+ .....|+|++++++|++++|+||||+|+||.+||++||+++++++++||++|+... .. .. .
T Consensus 79 ~~~---~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~--~~---------~~--~ 142 (250)
T PF01501_consen 79 KRH---FSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFD--NF---------PN--K 142 (250)
T ss_dssp CTC---GGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----H--HH---------HT--S
T ss_pred ccc---ccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhh--hh---------hh--c
Confidence 112 23356789999999999999999999999999999999999999999999993110 00 00 0
Q ss_pred CCCccCCCCCCCCCcccccccceeHHHHHHHHH-HHHHHHHHHHhhccCCCCChHHHHHHhccCeeecCCccccccCCC-
Q 016223 267 QPWVSGKPYAVNSCMPDLGMLLIDARKLEKYIL-EAFLWWKKVINQRDRSIGRSPAIALALYDRYLKLSSSWLVTDSTS- 344 (393)
Q Consensus 267 ~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~-~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~~~~L~~~WN~~~~~~- 344 (393)
.............+||||||||+|+++||++.+ +++..+++.... ....+||++||.+|.+++..||.+||++....
T Consensus 143 ~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~ 221 (250)
T PF01501_consen 143 RFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM-KLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYN 221 (250)
T ss_dssp TTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT-T-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHH
T ss_pred ccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc-ccCcCchHHHhhhccceeEEECchhcccccccc
Confidence 001111112234689999999999999996554 777776654322 23469999999999999999999999986533
Q ss_pred -------CCCCCcEEEEcCCCCCCCCCC
Q 016223 345 -------SVVNKSLAIRYDGPMTACSEF 365 (393)
Q Consensus 345 -------~~~~~p~IIHf~G~~KPW~~~ 365 (393)
...++++||||+|..|||...
T Consensus 222 ~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 222 QSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred ccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 256789999999999999875
No 17
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=1.4e-36 Score=291.27 Aligned_cols=229 Identities=13% Similarity=0.108 Sum_probs=159.0
Q ss_pred eEEEE-EecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC--CCeEEEechhhhhhhhhcCC
Q 016223 110 VHIVS-WMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH--SNLEFHGQEEVKKVIRTAST 186 (393)
Q Consensus 110 I~I~~-~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~--~~i~v~~~~~v~~~i~~~~~ 186 (393)
|||++ ++|+.|+++++|++.|+++|+. ..++|||+..+ ++++++++|+++... ..++++..+.. ..+. ..+
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~--is~e~~~~l~~~~~~~~~~i~~i~i~~~-~~~~-~~~ 74 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNF--LSPQFKEFLPEMAKEYGFEYELVTYKWP-RWLH-KQT 74 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCC--CCHHHHHHHHHHHHHhCCceEEEEecCh-hhhh-ccc
Confidence 57774 4578999999999999999984 46999999754 466788888887654 35566654311 1111 011
Q ss_pred CccchhhhHHHhHHHHhhhccC-CCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhhc
Q 016223 187 GVKYSVQNFEEIVPFVIASVHQ-SLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRSA 265 (393)
Q Consensus 187 ~~~~~~~~~~~~~r~~LP~l~p-~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~~ 265 (393)
..... ...|.|++++++|| +++||||||||+||+|||+|||++||+|+++|||+||...... -.. ... .+
T Consensus 75 ~~~~~---~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~-~~~-~~~-~~--- 145 (248)
T cd06432 75 EKQRI---IWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEM-DGF-RFW-KQ--- 145 (248)
T ss_pred ccchh---HHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhc-ccc-hhh-hh---
Confidence 11111 12356777777898 6999999999999999999999999999999999998532100 000 000 00
Q ss_pred CCCCccCCCCCCCCCcccccccceeHHHHHHHHH-HHHHHHHHHHhhcc--CCCCChHHHHHHhccC-eeecCCcccccc
Q 016223 266 SQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYIL-EAFLWWKKVINQRD--RSIGRSPAIALALYDR-YLKLSSSWLVTD 341 (393)
Q Consensus 266 ~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~-~~i~~~~~~~~~~~--~~~~DQd~ln~~~~g~-~~~L~~~WN~~~ 341 (393)
..|.. .+ +...|||||||||||++||++.+ +++...++...... ..++|||+||.++.++ ++.||.+||++.
T Consensus 146 -~~~~~--~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~ 221 (248)
T cd06432 146 -GYWKS--HL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCE 221 (248)
T ss_pred -hhhhh--hc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHH
Confidence 00111 11 23459999999999999997665 66665554432222 2358999999999986 999999999975
Q ss_pred C--CCCCCCCcEEEEcCC
Q 016223 342 S--TSSVVNKSLAIRYDG 357 (393)
Q Consensus 342 ~--~~~~~~~p~IIHf~G 357 (393)
. ..+..+.+.+|||+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~ 239 (248)
T cd06432 222 TWCSDESKKKAKTIDLCN 239 (248)
T ss_pred HHhcccccCccceeeccc
Confidence 4 234577899999975
No 18
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=1.5e-33 Score=275.76 Aligned_cols=237 Identities=14% Similarity=0.168 Sum_probs=157.4
Q ss_pred eEEE-EEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC--CCCe--EEEechhhhhhhhhc
Q 016223 110 VHIV-SWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP--HSNL--EFHGQEEVKKVIRTA 184 (393)
Q Consensus 110 I~I~-~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~--~~~i--~v~~~~~v~~~i~~~ 184 (393)
|||+ +|++++ ++.+.|+|.|++.||. ..++|||++.+. .++...++|+++.. ...+ +++... +
T Consensus 1 ~~~~vv~~g~~-~~~~~~~lkSil~~n~--~~l~Fhi~~d~~-~~~~~~~~l~~~~~~~~~~i~~~i~~I~-~------- 68 (304)
T cd06430 1 MHLAVVACGER-LEETLTMLKSAIVFSQ--KPLRFHIFAEDQ-LKQSFKEKLDDWPELIDRKFNYTLHPIT-F------- 68 (304)
T ss_pred CEEEEEEcCCc-HHHHHHHHHHHHHhCC--CCEEEEEEECCc-cCHHHHHHHHHHHHhccceeeeEEEEEe-c-------
Confidence 4555 455655 8999999999999984 469999998653 34456667887722 1223 444331 1
Q ss_pred CCCc---cchh-hhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhC--CCCCC-eEEEEcccccccccccChhh
Q 016223 185 STGV---KYSV-QNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGI--DLSNY-AIAAADDCSERLNSYVNPDV 257 (393)
Q Consensus 185 ~~~~---~~~~-~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~--DL~~~-~iAAv~D~~~~~~~y~~~~~ 257 (393)
+.. .++. -....|.|+++|++||+++|||||||||||+|||+|||++ |++++ ++|+++|.... +...
T Consensus 69 -P~~~~~~ws~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~-----~~~~ 142 (304)
T cd06430 69 -PSGNAAEWKKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEP-----NIGW 142 (304)
T ss_pred -CccchhhhhhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEeccccc-----chhh
Confidence 111 1111 1124678999999999999999999999999999999999 99986 55556663210 0000
Q ss_pred hHHHhhhcCCCCccCCCCCCCCCcccccccceeHHHHHH-----------HH-HHHHHHHHHHHhhccCCCCChHHHHHH
Q 016223 258 LDAIQRSASQPWVSGKPYAVNSCMPDLGMLLIDARKLEK-----------YI-LEAFLWWKKVINQRDRSIGRSPAIALA 325 (393)
Q Consensus 258 l~~iq~~~~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~-----------~~-~~~i~~~~~~~~~~~~~~~DQd~ln~~ 325 (393)
. ++... .+|. ...|||||||||||++||+ .. .++++.+++++. ....++|||+||++
T Consensus 143 ~---~~~~~------~~~~-~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~DQDiLN~v 211 (304)
T cd06430 143 Y---NRFAR------HPYY-GKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK-LKITWGDQDLINII 211 (304)
T ss_pred h---hhhcc------cCcc-cccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcc-cCCCCCCHHHHHHH
Confidence 0 01011 1221 1236999999999999997 33 355666665443 22347999999999
Q ss_pred hccC---eeecCCccccccCC--------CCCCCCcEEEEcCCCCCCCCCCCCCCCCCCchHHhhccc
Q 016223 326 LYDR---YLKLSSSWLVTDST--------SSVVNKSLAIRYDGPMTACSEFGDGANMEPARGDLWKQH 382 (393)
Q Consensus 326 ~~g~---~~~L~~~WN~~~~~--------~~~~~~p~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~Y 382 (393)
|+++ ++.||.+||++... ....+.++||||+++.| +.. + ...++.++.-.
T Consensus 212 ~~~~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~~~--~~~---~--~~~f~~~~~~~ 272 (304)
T cd06430 212 FHHNPEMLYVFPCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRGVY--HSD---K--QPAFRAVYEAI 272 (304)
T ss_pred HcCCCCeEEEcCccccCCccceeecccccccccccceEEEcCCCCC--CCc---c--chHHHHHHHHH
Confidence 9998 89999999976531 11346899999998877 221 2 23466666543
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.97 E-value=2e-30 Score=247.17 Aligned_cols=222 Identities=13% Similarity=0.067 Sum_probs=152.7
Q ss_pred EEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCCccch
Q 016223 112 IVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTGVKYS 191 (393)
Q Consensus 112 I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~~~~~ 191 (393)
+.+++|++|+.+++|++.||++|+++ ..+++++++. .+++++++|++.. .+++..+.+............+.
T Consensus 4 ~t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~-is~~~~~~L~~~~----~~~~~v~~i~~~~~~~~~~~~~~ 75 (240)
T cd02537 4 VTLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPG-VSEESREALEEVG----WIVREVEPIDPPDSANLLKRPRF 75 (240)
T ss_pred EEEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCC-CCHHHHHHHHHcC----CEEEecCccCCcchhhhccchHH
Confidence 34677999999999999999999764 4567776532 5667888888753 33433322211000000111222
Q ss_pred hhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhhcCCCCcc
Q 016223 192 VQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRSASQPWVS 271 (393)
Q Consensus 192 ~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~~~~~~~~ 271 (393)
. ..|.|++++++. +++||||||+|+||.+||++||++ ++.+||+.|+..
T Consensus 76 ~---~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~~------------------------ 124 (240)
T cd02537 76 K---DTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCGW------------------------ 124 (240)
T ss_pred H---HHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccCc------------------------
Confidence 2 356789999864 799999999999999999999988 677888887520
Q ss_pred CCCCCCCCCcccccccceeHHHHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHhccC--eeecCCccccccCCC-----
Q 016223 272 GKPYAVNSCMPDLGMLLIDARKLEKYILEAFLWWKKVINQRDRSIGRSPAIALALYDR--YLKLSSSWLVTDSTS----- 344 (393)
Q Consensus 272 ~~~~~~~~~YFNsGVLLiNL~~wR~~~~~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~--~~~L~~~WN~~~~~~----- 344 (393)
..|||||||++|+++.. .+.+++.+.+.. ....+||++||.+|+++ ++.|+.+||++....
T Consensus 125 -------~~~fNsGv~l~~~~~~~---~~~~~~~~~~~~--~~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~ 192 (240)
T cd02537 125 -------PDLFNSGVFVLKPSEET---FNDLLDALQDTP--SFDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPE 192 (240)
T ss_pred -------cccccceEEEEcCCHHH---HHHHHHHHhccC--CCCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCch
Confidence 13899999999997642 334444443322 13468999999999999 999999999875421
Q ss_pred --CCCCCcEEEEcCCCCCCCCCCCCCCC----CCCchHHhhccccC
Q 016223 345 --SVVNKSLAIRYDGPMTACSEFGDGAN----MEPARGDLWKQHLP 384 (393)
Q Consensus 345 --~~~~~p~IIHf~G~~KPW~~~~~~~~----~~~~~~~~W~~Yl~ 384 (393)
...++|+||||+|+.|||+..+.... -......-||+.+.
T Consensus 193 ~~~~~~~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~~ 238 (240)
T cd02537 193 ALWFGDEIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIYD 238 (240)
T ss_pred hhcccCCcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHHh
Confidence 23468999999999999987654311 01224567776654
No 20
>PLN00176 galactinol synthase
Probab=99.97 E-value=1.7e-29 Score=250.42 Aligned_cols=258 Identities=12% Similarity=0.042 Sum_probs=160.1
Q ss_pred eEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCCcc
Q 016223 110 VHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTGVK 189 (393)
Q Consensus 110 I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~~~ 189 (393)
.=.++++|++|+.++.|+.+||..+.+. . .+.+++.. +.+.+.++.|++. +..+...+.+... .....
T Consensus 25 yVT~L~~n~~Y~~Ga~vL~~SLr~~~s~-~--~lVvlVt~-dVp~e~r~~L~~~----g~~V~~V~~i~~~----~~~~~ 92 (333)
T PLN00176 25 YVTFLAGNGDYVKGVVGLAKGLRKVKSA-Y--PLVVAVLP-DVPEEHRRILVSQ----GCIVREIEPVYPP----ENQTQ 92 (333)
T ss_pred EEEEEecCcchHHHHHHHHHHHHHhCCC-C--CEEEEECC-CCCHHHHHHHHHc----CCEEEEecccCCc----ccccc
Confidence 3344677999999999999999887433 2 34555442 3455667777643 3344433222100 00011
Q ss_pred chhhhH-HHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccc--cccccChhhhHHHhhh-c
Q 016223 190 YSVQNF-EEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSER--LNSYVNPDVLDAIQRS-A 265 (393)
Q Consensus 190 ~~~~~~-~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~--~~~y~~~~~l~~iq~~-~ 265 (393)
+....+ .+|.++.+.++. +++||||||||+||.++|+|||+++ +..+|||.||... ...+-... ....|.. .
T Consensus 93 ~~~~~~~i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~-~~~c~~~~~ 168 (333)
T PLN00176 93 FAMAYYVINYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYK-IGYCQQCPD 168 (333)
T ss_pred cccchhhhhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEeccccccccccccccc-ccccccchh
Confidence 111111 246688888865 7899999999999999999999884 3368999998432 11100000 0000110 0
Q ss_pred CCCCccCCCCCCCCCcccccccceeHHHHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHhccCeeecCCccccccCCC-
Q 016223 266 SQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYILEAFLWWKKVINQRDRSIGRSPAIALALYDRYLKLSSSWLVTDSTS- 344 (393)
Q Consensus 266 ~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~~~~L~~~WN~~~~~~- 344 (393)
...|....+ .+...||||||||||+++|+.+.+ +++++... ...++|||+||.+|.|+|+.||.+||++....
T Consensus 169 ~~~wp~~~g-~~~~~yFNSGVlvinps~~~~~~l---l~~l~~~~--~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~ 242 (333)
T PLN00176 169 KVTWPAELG-PPPPLYFNAGMFVFEPSLSTYEDL---LETLKITP--PTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLW 242 (333)
T ss_pred hccchhhcc-CCCCCeEEeEEEEEEcCHHHHHHH---HHHHHhcC--CCCCCCHHHHHHHHcCcEEECCchhcCchhhhh
Confidence 112221111 123569999999999999985432 23332222 23579999999999999999999999875311
Q ss_pred -----CCCCCcEEEEcCC-CCCCCCCCCCCCCCC----CchHHhhccccCcchhh
Q 016223 345 -----SVVNKSLAIRYDG-PMTACSEFGDGANME----PARGDLWKQHLPPLFYQ 389 (393)
Q Consensus 345 -----~~~~~p~IIHf~G-~~KPW~~~~~~~~~~----~~~~~~W~~Yl~~~~~~ 389 (393)
...++++||||+| ..|||+..+....++ ..+-+.||..+..++-.
T Consensus 243 ~~~~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~ 297 (333)
T PLN00176 243 RHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDESLD 297 (333)
T ss_pred hChhhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhcccccc
Confidence 1245899999997 689998765433221 23457899998877643
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.87 E-value=3.2e-21 Score=187.45 Aligned_cols=201 Identities=12% Similarity=0.098 Sum_probs=132.5
Q ss_pred EEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHH---HhhCCCCCeEEEechhhhhhhhhcCCCcc
Q 016223 113 VSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKL---KVLFPHSNLEFHGQEEVKKVIRTASTGVK 189 (393)
Q Consensus 113 ~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kL---k~l~~~~~i~v~~~~~v~~~i~~~~~~~~ 189 (393)
-+.+++.|+.++.|+..|+-+..+..+ ..+++++.-... ....+ .......++.+........ ......
T Consensus 5 tl~Tn~~YL~gAlvL~~sLr~~gs~~d---lVvLvt~~~~~~-~~~~~~~~~~~l~~~~~~v~~v~~~~~----~~~~~~ 76 (278)
T cd06914 5 NYATNADYLCNALILFEQLRRLGSKAK---LVLLVPETLLDR-NLDDFVRRDLLLARDKVIVKLIPVIIA----SGGDAY 76 (278)
T ss_pred EEecChhHHHHHHHHHHHHHHhCCCCC---EEEEECCCCChh-hhhhHHHHHHHhhccCcEEEEcCcccC----CCCCcc
Confidence 356799999999999999988766433 344554432221 11111 1112233444433221110 001112
Q ss_pred chhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhhcCCCC
Q 016223 190 YSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRSASQPW 269 (393)
Q Consensus 190 ~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~~~~~~ 269 (393)
+. ..|.|+.+.++ .+++||||||||+||+++|+|||+++... .+||+. ..
T Consensus 77 ~~----~~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~~-~~Aap~-~~----------------------- 126 (278)
T cd06914 77 WA----KSLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNYI-KFAAPR-AY----------------------- 126 (278)
T ss_pred HH----HHHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCccc-ceeeec-Cc-----------------------
Confidence 22 23678899887 57999999999999999999999998433 355543 10
Q ss_pred ccCCCCCCCCCcccccccceeHHHHHHH-HHHHHHHHHHHHhhccCCCCChHHHHHHhccC-------eeecCCc-cccc
Q 016223 270 VSGKPYAVNSCMPDLGMLLIDARKLEKY-ILEAFLWWKKVINQRDRSIGRSPAIALALYDR-------YLKLSSS-WLVT 340 (393)
Q Consensus 270 ~~~~~~~~~~~YFNsGVLLiNL~~wR~~-~~~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~-------~~~L~~~-WN~~ 340 (393)
-||||||||||+++|+.+ +++.+.. +.......+|||+||.+|.|+ +..||.+ ||+.
T Consensus 127 ----------~~FNSGvmvi~ps~~~~~~l~~~~~~----~~~~~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~ll 192 (278)
T cd06914 127 ----------WKFASHLMVIKPSKEAFKELMTEILP----AYLNKKNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLL 192 (278)
T ss_pred ----------ceecceeEEEeCCHHHHHHHHHHHHH----hcccCCCCCChHHHHHHHhCCccccCcceEEcCccccccC
Confidence 179999999999999954 4455543 222222468999999999999 9999996 9987
Q ss_pred cCC-----------C-----------CCCCCcEEEEcCCC--CCCCCCC
Q 016223 341 DST-----------S-----------SVVNKSLAIRYDGP--MTACSEF 365 (393)
Q Consensus 341 ~~~-----------~-----------~~~~~p~IIHf~G~--~KPW~~~ 365 (393)
... . +..++.++|||++. .|||...
T Consensus 193 t~~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~ 241 (278)
T cd06914 193 TGEFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYN 241 (278)
T ss_pred ChhhcccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCc
Confidence 641 1 13367899999975 6999765
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.02 E-value=3.6e-10 Score=125.13 Aligned_cols=234 Identities=14% Similarity=0.187 Sum_probs=147.8
Q ss_pred CCCCceEEE-EEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEE--Eech---hhh
Q 016223 105 QDDGMVHIV-SWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEF--HGQE---EVK 178 (393)
Q Consensus 105 ~~~~~I~I~-~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v--~~~~---~v~ 178 (393)
.+.+.|||| +++-..|=|.|-+++.|++.|++.| +.|.|+-.- .+...++-+-.+...+++++ +..+ .+.
T Consensus 1177 ~~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNy--LSPtFKe~iP~mA~eYnFeyElv~YkWPrWLh 1252 (1470)
T KOG1879|consen 1177 KDKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNY--LSPTFKESIPHMAKEYNFEYELVQYKWPRWLH 1252 (1470)
T ss_pred CccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhh--cChHHHHHHHHHHHHhCceEEEEEecCchhhh
Confidence 445579999 6678899999999999999999986 889888432 23333444444444555544 3332 111
Q ss_pred hhhhhcCCCccchhhhHHHhHHHHhhhccC-CCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccc--cccccCh
Q 016223 179 KVIRTASTGVKYSVQNFEEIVPFVIASVHQ-SLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSER--LNSYVNP 255 (393)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~~~~r~~LP~l~p-~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~--~~~y~~~ 255 (393)
.- .-..+..+. | ==+||-=||| +++||||.|+|-||..||.||.++||+|.+.|=++=|..| +..|
T Consensus 1253 qQ----~EKQRiiWg-y---KILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGy--- 1321 (1470)
T KOG1879|consen 1253 QQ----TEKQRIIWG-Y---KILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGY--- 1321 (1470)
T ss_pred hh----hhhhhhhhh-h---hhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccch---
Confidence 00 000111111 1 1135556667 9999999999999999999999999999999988877543 2212
Q ss_pred hhhHHHhhhcCCC-CccCCCCCCCCCcccccccceeHHHHHHHHH-HHHHHHHHHHhhccCC--CCChHHHHHHhc-cCe
Q 016223 256 DVLDAIQRSASQP-WVSGKPYAVNSCMPDLGMLLIDARKLEKYIL-EAFLWWKKVINQRDRS--IGRSPAIALALY-DRY 330 (393)
Q Consensus 256 ~~l~~iq~~~~~~-~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~-~~i~~~~~~~~~~~~~--~~DQd~ln~~~~-g~~ 330 (393)
.++ +++ |.. .-....|-=+...|+||++.|+--. +++.--.+.+++.-.. -.|||.-|.+.+ =-+
T Consensus 1322 RFW-------K~GYW~~---hL~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpI 1391 (1470)
T KOG1879|consen 1322 RFW-------KQGYWKK---HLRGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPI 1391 (1470)
T ss_pred hHH-------hhhHHHH---HhccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeeccc
Confidence 111 111 111 0011345667888999999997332 3443322333322111 378998887754 358
Q ss_pred eecCCccccccC--CCCCCCCcEEEEcCCCCCCCCCC
Q 016223 331 LKLSSSWLVTDS--TSSVVNKSLAIRYDGPMTACSEF 365 (393)
Q Consensus 331 ~~L~~~WN~~~~--~~~~~~~p~IIHf~G~~KPW~~~ 365 (393)
+.||..|-.+.. +....+.+++|--|. .||.+.
T Consensus 1392 kSLPqeWLWCETWC~d~skkkAktIDLCn--NP~TKE 1426 (1470)
T KOG1879|consen 1392 KSLPQEWLWCETWCDDESKKKAKTIDLCN--NPLTKE 1426 (1470)
T ss_pred ccCCcchhhhhhhcCchhhhhchhhhhhc--Cccccc
Confidence 899999987654 333567788888886 488665
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.35 E-value=1.9e-07 Score=90.99 Aligned_cols=158 Identities=18% Similarity=0.175 Sum_probs=89.2
Q ss_pred CCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEccccccc------ccccCh---hhhHHH-h-------------hhc
Q 016223 209 SLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERL------NSYVNP---DVLDAI-Q-------------RSA 265 (393)
Q Consensus 209 ~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~------~~y~~~---~~l~~i-q-------------~~~ 265 (393)
++|||+|||+|.||..++.+||++. -+-.+|..|..... .+-+.. +.+.+- . +.+
T Consensus 167 EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~~ly~Pylf~a~~d 244 (368)
T COG5597 167 EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRAALYAPYLFWARTD 244 (368)
T ss_pred hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHhhhccccccccccC
Confidence 7899999999999999999999876 44566766653211 110100 001100 0 001
Q ss_pred CCCCccCCCCCCCCCcccccccceeHHHHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHhc--c--CeeecCCcccccc
Q 016223 266 SQPWVSGKPYAVNSCMPDLGMLLIDARKLEKYILEAFLWWKKVINQRDRSIGRSPAIALALY--D--RYLKLSSSWLVTD 341 (393)
Q Consensus 266 ~~~~~~~~~~~~~~~YFNsGVLLiNL~~wR~~~~~~i~~~~~~~~~~~~~~~DQd~ln~~~~--g--~~~~L~~~WN~~~ 341 (393)
...|.++- +.-..+||||.||++..+..-..+..+. +-+.+. +-....|-.+|++.+ | -|..++.+|| |
T Consensus 245 q~~~hstp--P~fk~~FnagLmv~~Psk~hm~riv~~a-lPklyd--da~mmeqsllnlaYn~~g~FPwerld~~yN--G 317 (368)
T COG5597 245 QTFLHSTP--PDFKLKFNAGLMVGLPSKMHMLRIVWFA-LPKLYD--DADMMEQSLLNLAYNYEGFFPWERLDPRYN--G 317 (368)
T ss_pred CcccccCC--CcHhhhhccCceeecchHHHHHHHHHHh-hHHhhh--hhhHHHHHHHHHHHhhhccCchhhcCcccc--c
Confidence 11222221 2224689999999999998633222221 111111 112245778888842 2 3667788888 4
Q ss_pred CCCCCCCCc--EEEEcCCCCCCCCCCCCCCCCCCchHHhhcc
Q 016223 342 STSSVVNKS--LAIRYDGPMTACSEFGDGANMEPARGDLWKQ 381 (393)
Q Consensus 342 ~~~~~~~~p--~IIHf~G~~KPW~~~~~~~~~~~~~~~~W~~ 381 (393)
.-..+-+=| +-+|+ |||...+.+ ..++-+..|||
T Consensus 318 ~wa~~ndlPylka~Hg----K~W~y~g~~--fp~i~~~ew~~ 353 (368)
T COG5597 318 YWADANDLPYLKAWHG----KPWFYTGEQ--FPDIAGLEWPQ 353 (368)
T ss_pred ccccccccchHHHhhc----CcCCCCccc--ChhhhcCcChh
Confidence 322221213 34565 999988754 25677888984
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=96.74 E-value=0.009 Score=55.42 Aligned_cols=125 Identities=11% Similarity=0.049 Sum_probs=73.0
Q ss_pred hhccCCCCeEEEEeCCeeeeCChHHHHhCCCCCCeEEEEcccccccccccChhhhHHHhhhcCCCCccCCCCCCCCCccc
Q 016223 204 ASVHQSLSKFIYMSPSVIVKGRVEELIGIDLSNYAIAAADDCSERLNSYVNPDVLDAIQRSASQPWVSGKPYAVNSCMPD 283 (393)
Q Consensus 204 P~l~p~~~KvLYLD~DiIV~gdL~eL~~~DL~~~~iAAv~D~~~~~~~y~~~~~l~~iq~~~~~~~~~~~~~~~~~~YFN 283 (393)
-+++..---|+|+|+|++..+|..+++ +-.+.-+.+..|+..... .......+|
T Consensus 60 ~~~L~~G~~vl~~D~Dvv~~~dp~~~~--~~~~~Di~~~~d~~~~~~------------------------~~~~~~~~n 113 (212)
T PF03407_consen 60 LDLLELGYDVLFSDADVVWLRDPLPYF--ENPDADILFSSDGWDGTN------------------------SDRNGNLVN 113 (212)
T ss_pred HHHHHcCCceEEecCCEEEecCcHHhh--ccCCCceEEecCCCcccc------------------------hhhcCCccc
Confidence 344433356999999999999999999 224444555556532100 001122469
Q ss_pred ccccceeHHHHHHHHHHHHHHHHHHHhhccCCCCChHHHHHHhccC--------eeecCCccc------ccc-C-CCCC-
Q 016223 284 LGMLLIDARKLEKYILEAFLWWKKVINQRDRSIGRSPAIALALYDR--------YLKLSSSWL------VTD-S-TSSV- 346 (393)
Q Consensus 284 sGVLLiNL~~wR~~~~~~i~~~~~~~~~~~~~~~DQd~ln~~~~g~--------~~~L~~~WN------~~~-~-~~~~- 346 (393)
+|++++.-..--... +..|.+..... ....||.++|.++.+. +..||..-- +.. . ....
T Consensus 114 ~G~~~~r~t~~~~~~---~~~w~~~~~~~-~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~ 189 (212)
T PF03407_consen 114 TGFYYFRPTPRTIAF---LEDWLERMAES-PGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVP 189 (212)
T ss_pred cceEEEecCHHHHHH---HHHHHHHHHhC-CCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhc
Confidence 999999776643333 44455443332 2235999999998774 334544221 111 0 0011
Q ss_pred -CCCcEEEEcCCC
Q 016223 347 -VNKSLAIRYDGP 358 (393)
Q Consensus 347 -~~~p~IIHf~G~ 358 (393)
..+|.|||.++.
T Consensus 190 ~~~~p~~vH~n~~ 202 (212)
T PF03407_consen 190 TKNKPYIVHANCC 202 (212)
T ss_pred cccccceEEEcCC
Confidence 358999999863
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=96.02 E-value=0.021 Score=55.75 Aligned_cols=108 Identities=13% Similarity=0.011 Sum_probs=64.5
Q ss_pred EEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecC-CCCChHHHHHHHhhCCCCCeEEEechhh--hhhhhhcCCCc
Q 016223 112 IVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPK-GSEDMVSFYKLKVLFPHSNLEFHGQEEV--KKVIRTASTGV 188 (393)
Q Consensus 112 I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~-~~~~~~~~~kLk~l~~~~~i~v~~~~~v--~~~i~~~~~~~ 188 (393)
||++.-+.|+..+..+|..+-.. .+.-.| -|+... ...+++..++|.. ..++.++..+.+ .+.........
T Consensus 4 IVi~~g~~~~~~a~~lI~~LR~~-g~~LPI--EI~~~~~~dl~~~~~~~l~~---~q~v~~vd~~~~~~~~~~~~~~~~~ 77 (271)
T PF11051_consen 4 IVITAGDKYLWLALRLIRVLRRL-GNTLPI--EIIYPGDDDLSKEFCEKLLP---DQDVWFVDASCVIDPDYLGKSFSKK 77 (271)
T ss_pred EEEEecCccHHHHHHHHHHHHHh-CCCCCE--EEEeCCccccCHHHHHHHhh---hhhhheecceEEeeccccccccccC
Confidence 78888778898888888888663 333344 444443 3334445555544 445554443211 11111100000
Q ss_pred cchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhCC
Q 016223 189 KYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGID 233 (393)
Q Consensus 189 ~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~D 233 (393)
.|..-.++-++.+.+.||+||+|.|...|.+.||+.+
T Consensus 78 --------~~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 78 --------GFQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred --------CchhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 2233455666667899999999999999999999864
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=95.86 E-value=0.05 Score=55.85 Aligned_cols=86 Identities=16% Similarity=0.187 Sum_probs=55.2
Q ss_pred CcccccccceeHHHHHHHHHHH----------HHHHHHHHh--hccCC---CCChHHHHHHh-c-----cCeeecCCccc
Q 016223 280 CMPDLGMLLIDARKLEKYILEA----------FLWWKKVIN--QRDRS---IGRSPAIALAL-Y-----DRYLKLSSSWL 338 (393)
Q Consensus 280 ~YFNsGVLLiNL~~wR~~~~~~----------i~~~~~~~~--~~~~~---~~DQd~ln~~~-~-----g~~~~L~~~WN 338 (393)
.-.|+||+||-..+|-.++++. -..|-+.+. ..++. .-||.+|-.++ . ++..+|...|-
T Consensus 243 ~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~ 322 (429)
T PLN03182 243 IGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYY 322 (429)
T ss_pred CccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecce
Confidence 3589999999999997665533 111222111 11221 36899887776 2 34567888888
Q ss_pred cccCC-----------------CCCCCCcEEEEcCCCCCCCCCCC
Q 016223 339 VTDST-----------------SSVVNKSLAIRYDGPMTACSEFG 366 (393)
Q Consensus 339 ~~~~~-----------------~~~~~~p~IIHf~G~~KPW~~~~ 366 (393)
++++- ....+-|.|.||+| .|||....
T Consensus 323 l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~ 366 (429)
T PLN03182 323 LHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYG 366 (429)
T ss_pred eccccHHHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCC
Confidence 87761 12345699999999 69997764
No 27
>PLN03181 glycosyltransferase; Provisional
Probab=93.79 E-value=0.24 Score=51.06 Aligned_cols=63 Identities=16% Similarity=0.314 Sum_probs=36.7
Q ss_pred CcccccccceeHHHHHHHHHHH----------HHHHHHHHhh--ccCC---CCChHHHHHHh-c-----cCeeecCCccc
Q 016223 280 CMPDLGMLLIDARKLEKYILEA----------FLWWKKVINQ--RDRS---IGRSPAIALAL-Y-----DRYLKLSSSWL 338 (393)
Q Consensus 280 ~YFNsGVLLiNL~~wR~~~~~~----------i~~~~~~~~~--~~~~---~~DQd~ln~~~-~-----g~~~~L~~~WN 338 (393)
.-||+||+||-..+|-.+.++. ...|-+.+.. .++. .-||-+|-..+ . ++..+|...|-
T Consensus 244 ~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy 323 (453)
T PLN03181 244 TALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYY 323 (453)
T ss_pred cccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeeccee
Confidence 4699999999999997655432 2223332211 1222 24677765443 2 23557777777
Q ss_pred cccC
Q 016223 339 VTDS 342 (393)
Q Consensus 339 ~~~~ 342 (393)
+++.
T Consensus 324 ~~Gy 327 (453)
T PLN03181 324 FEGY 327 (453)
T ss_pred eeee
Confidence 7765
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=91.74 E-value=0.11 Score=49.99 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred CCCCcccccccceeHHHHHHHHHHHHHHHHHHHhhccC---CCCChHHHHHHhcc------CeeecCCcc-ccccCC---
Q 016223 277 VNSCMPDLGMLLIDARKLEKYILEAFLWWKKVINQRDR---SIGRSPAIALALYD------RYLKLSSSW-LVTDST--- 343 (393)
Q Consensus 277 ~~~~YFNsGVLLiNL~~wR~~~~~~i~~~~~~~~~~~~---~~~DQd~ln~~~~g------~~~~L~~~W-N~~~~~--- 343 (393)
.+...+|+||++|-...|-+.+++...... +...+. ...+|.+|-.+++. ++..++.+| |-....
T Consensus 140 ~d~~gLNtGsFliRns~ws~~fLd~w~~~~--~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~~~~~ 217 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSRDFLDAWADPL--YRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPEDECN 217 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344579999999999999766654422211 111111 24689988766653 344555444 221111
Q ss_pred CCCCCCcEEEEcCC
Q 016223 344 SSVVNKSLAIRYDG 357 (393)
Q Consensus 344 ~~~~~~p~IIHf~G 357 (393)
....+...|+||+|
T Consensus 218 ~~~~~GDfvvhfaG 231 (239)
T PF05637_consen 218 YQYKEGDFVVHFAG 231 (239)
T ss_dssp --------------
T ss_pred cccccccccccccc
Confidence 12445678999998
No 29
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=77.55 E-value=1.1 Score=45.81 Aligned_cols=34 Identities=15% Similarity=0.328 Sum_probs=23.8
Q ss_pred HHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHhC
Q 016223 195 FEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIGI 232 (393)
Q Consensus 195 ~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~~ 232 (393)
+..+.|+.+--=+-. ||||.|+||++++++|=++
T Consensus 227 lSdl~RLA~LyKYGG----vYLDTDvIvLksl~~l~N~ 260 (409)
T KOG1928|consen 227 LSDLSRLALLYKYGG----VYLDTDVIVLKSLSNLRNV 260 (409)
T ss_pred HHHHHHHHHHHHhCC----EEeeccEEEeccccccccc
Confidence 445667654431112 8999999999999998753
No 30
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=77.16 E-value=17 Score=29.79 Aligned_cols=30 Identities=13% Similarity=0.352 Sum_probs=22.9
Q ss_pred HhHHHHhhhccCCCCeEEEEeCCeeeeCCh-HHHH
Q 016223 197 EIVPFVIASVHQSLSKFIYMSPSVIVKGRV-EELI 230 (393)
Q Consensus 197 ~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL-~eL~ 230 (393)
-++|+.+--..-. ||+|.|++|..++ +++.
T Consensus 67 D~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 67 DLLRYLVLYKYGG----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred HHHHHHHHHHcCc----EEEeCccccCcchhhhhh
Confidence 4677777654434 9999999999999 6654
No 31
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=76.04 E-value=2.3 Score=43.33 Aligned_cols=149 Identities=12% Similarity=0.037 Sum_probs=76.0
Q ss_pred CCCCeEEEEeCCeeeeCChHHHHhCCCC-CC--eEEEEcccccccccccChhhhHHHhhhcCCCCc-cCCCCC--CCCCc
Q 016223 208 QSLSKFIYMSPSVIVKGRVEELIGIDLS-NY--AIAAADDCSERLNSYVNPDVLDAIQRSASQPWV-SGKPYA--VNSCM 281 (393)
Q Consensus 208 p~~~KvLYLD~DiIV~gdL~eL~~~DL~-~~--~iAAv~D~~~~~~~y~~~~~l~~iq~~~~~~~~-~~~~~~--~~~~Y 281 (393)
.+.++.+|+|.|+.+..++..++++-.+ ++ .-....+..... +..+.-..+.......|. ....+. ...+.
T Consensus 123 ~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~ 199 (369)
T KOG1950|consen 123 IEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKL---VKIDADDCILKNDDLLFSNWPDLFATNILPLI 199 (369)
T ss_pred eccCceEEEecchhhccCccccccccchhcccccceeeecccccc---eEEeccchhcCChhhhhhhchhhccCCCccce
Confidence 3678999999999999999998876554 21 111122211110 111110001110000111 111111 12356
Q ss_pred ccccccceeHHHHHHHHHHHHHHHHHHHhh-ccCCCCChHHHHHHhccCeeecCCccccccCCCC-----------CCCC
Q 016223 282 PDLGMLLIDARKLEKYILEAFLWWKKVINQ-RDRSIGRSPAIALALYDRYLKLSSSWLVTDSTSS-----------VVNK 349 (393)
Q Consensus 282 FNsGVLLiNL~~wR~~~~~~i~~~~~~~~~-~~~~~~DQd~ln~~~~g~~~~L~~~WN~~~~~~~-----------~~~~ 349 (393)
||+|.|++-...-.- +. +++.... .....++|+.++..|.......++..|+.-.... ....
T Consensus 200 ~n~~~~v~~ps~~~~---~~---~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~~ 273 (369)
T KOG1950|consen 200 FNSGLLVFEPSLCNY---KD---LMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSVL 273 (369)
T ss_pred eccCccccCCCccch---hh---HHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhccccc
Confidence 999999885544321 11 2221111 1123589999999987666577777775533110 1112
Q ss_pred cEEEEcCCCCCCCCCC
Q 016223 350 SLAIRYDGPMTACSEF 365 (393)
Q Consensus 350 p~IIHf~G~~KPW~~~ 365 (393)
-..+||+|..|||...
T Consensus 274 ~~~~~y~~~~~p~~~~ 289 (369)
T KOG1950|consen 274 RYALHYLGANKPELCY 289 (369)
T ss_pred chhhhccccCCCCccc
Confidence 2356999987887543
No 32
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=68.40 E-value=15 Score=36.14 Aligned_cols=38 Identities=13% Similarity=0.270 Sum_probs=28.5
Q ss_pred chhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHh
Q 016223 190 YSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIG 231 (393)
Q Consensus 190 ~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~ 231 (393)
.+.+.+.-++|+.|-...-. +||||+++|.++|.+.+.
T Consensus 106 i~~a~~SDilR~~LL~~yGG----vWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 106 ISPAHFSDILRLALLYKYGG----VWIDATVYLTKPLDDEIF 143 (276)
T ss_pred CchhHHHHHHHHHHHHHcCc----EEeCCceEECCchhHHHh
Confidence 34455566788877764433 999999999999997765
No 33
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=65.65 E-value=1e+02 Score=27.72 Aligned_cols=105 Identities=9% Similarity=0.021 Sum_probs=53.9
Q ss_pred eEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCCcc
Q 016223 110 VHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTGVK 189 (393)
Q Consensus 110 I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~~~ 189 (393)
|-|++.+=+.-...+.-+|.|++.-.-.++++.+.|+ +.+.++...+.++++..+..+.++.... .....
T Consensus 3 vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivv--dd~s~d~t~~~~~~~~~~~~~~~~~~~~--------~~~~~ 72 (234)
T cd06421 3 VDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVL--DDGRRPELRALAAELGVEYGYRYLTRPD--------NRHAK 72 (234)
T ss_pred eEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEE--cCCCchhHHHHHHHhhcccCceEEEeCC--------CCCCc
Confidence 6677666544345677899999875433222344333 3333444566666655444444433210 00100
Q ss_pred chhhhHHHhHHHHhhhccCCCCeEEEEeCCeeee-CChHHHHhC
Q 016223 190 YSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVK-GRVEELIGI 232 (393)
Q Consensus 190 ~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~-gdL~eL~~~ 232 (393)
......-++. . ..+=+++||+|.++. +-|+.|...
T Consensus 73 --~~~~n~~~~~--a----~~d~i~~lD~D~~~~~~~l~~l~~~ 108 (234)
T cd06421 73 --AGNLNNALAH--T----TGDFVAILDADHVPTPDFLRRTLGY 108 (234)
T ss_pred --HHHHHHHHHh--C----CCCEEEEEccccCcCccHHHHHHHH
Confidence 0111011111 1 468999999999996 445555554
No 34
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=62.16 E-value=89 Score=25.79 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=52.4
Q ss_pred hhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCC-CCCeEEEechhhhhhhhhcCCCccchhhhHHHhH
Q 016223 121 LRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFP-HSNLEFHGQEEVKKVIRTASTGVKYSVQNFEEIV 199 (393)
Q Consensus 121 l~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~-~~~i~v~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 199 (393)
...+.-++.|+++.+. ....+.|+ ++++ .+...+.++++.. ..+++++..++= .... .....-+
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~eiivv-dd~s-~d~~~~~~~~~~~~~~~i~~i~~~~n----------~g~~-~~~n~~~ 74 (169)
T PF00535_consen 10 AEYLERTLESLLKQTD--PDFEIIVV-DDGS-TDETEEILEEYAESDPNIRYIRNPEN----------LGFS-AARNRGI 74 (169)
T ss_dssp TTTHHHHHHHHHHHSG--CEEEEEEE-ECS--SSSHHHHHHHHHCCSTTEEEEEHCCC----------SHHH-HHHHHHH
T ss_pred HHHHHHHHHHHhhccC--CCEEEEEe-cccc-cccccccccccccccccccccccccc----------cccc-ccccccc
Confidence 6778889999998833 23445443 3333 3345666776654 556777654210 0000 0111111
Q ss_pred HHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhCCCC
Q 016223 200 PFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGIDLS 235 (393)
Q Consensus 200 r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~DL~ 235 (393)
... .-+-++.||+|.++..+ |++|.+.=.+
T Consensus 75 ~~a------~~~~i~~ld~D~~~~~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 75 KHA------KGEYILFLDDDDIISPDWLEELVEALEK 105 (169)
T ss_dssp HH--------SSEEEEEETTEEE-TTHHHHHHHHHHH
T ss_pred ccc------ceeEEEEeCCCceEcHHHHHHHHHHHHh
Confidence 211 24589999999999877 8888875433
No 35
>PRK15384 type III secretion system protein; Provisional
Probab=59.68 E-value=3.8 Score=39.66 Aligned_cols=22 Identities=18% Similarity=0.374 Sum_probs=19.3
Q ss_pred eEEEEeCCeeeeCChHHHHhCC
Q 016223 212 KFIYMSPSVIVKGRVEELIGID 233 (393)
Q Consensus 212 KvLYLD~DiIV~gdL~eL~~~D 233 (393)
-|||||+|||+.|.|--|+.-|
T Consensus 218 GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 218 GCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred ceEEeeccceeecccccEEcCC
Confidence 5899999999999999888544
No 36
>PRK15383 type III secretion system protein; Provisional
Probab=58.55 E-value=4.3 Score=39.32 Aligned_cols=22 Identities=18% Similarity=0.380 Sum_probs=19.3
Q ss_pred eEEEEeCCeeeeCChHHHHhCC
Q 016223 212 KFIYMSPSVIVKGRVEELIGID 233 (393)
Q Consensus 212 KvLYLD~DiIV~gdL~eL~~~D 233 (393)
-+||||+|||+.|.|--|+.-|
T Consensus 221 GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 221 GCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred ceEEeecceeeecccccEEcCC
Confidence 5999999999999999888544
No 37
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=58.21 E-value=4.4 Score=39.25 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=19.3
Q ss_pred eEEEEeCCeeeeCChHHHHhCC
Q 016223 212 KFIYMSPSVIVKGRVEELIGID 233 (393)
Q Consensus 212 KvLYLD~DiIV~gdL~eL~~~D 233 (393)
-+||||+|||+.|.|--|+.-|
T Consensus 213 GCIYLD~DMilT~KLG~ly~PD 234 (326)
T PRK15382 213 GCIYLDADMIITDKLGVLYAPD 234 (326)
T ss_pred ceEEeecceeeecccccEEcCC
Confidence 5999999999999999888544
No 38
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=53.53 E-value=1.7e+02 Score=26.37 Aligned_cols=108 Identities=11% Similarity=0.121 Sum_probs=58.0
Q ss_pred eEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCCcc
Q 016223 110 VHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTGVK 189 (393)
Q Consensus 110 I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~~~ 189 (393)
|.|++.+=++-...+.-+|.|++..+ + ..+.|+. +++. +...+.+++..+...+.++..+. .+..
T Consensus 2 isVvIp~~ne~~~~l~~~l~sl~~q~--~--~eiivvd-d~s~-d~~~~~l~~~~~~~~~~v~~~~~---------~g~~ 66 (235)
T cd06434 2 VTVIIPVYDEDPDVFRECLRSILRQK--P--LEIIVVT-DGDD-EPYLSILSQTVKYGGIFVITVPH---------PGKR 66 (235)
T ss_pred eEEEEeecCCChHHHHHHHHHHHhCC--C--CEEEEEe-CCCC-hHHHHHHHhhccCCcEEEEecCC---------CChH
Confidence 56676665554578888999999865 2 4454443 3332 23444554444434444443210 1110
Q ss_pred chhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhCCCCCCeEEEE
Q 016223 190 YSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGIDLSNYAIAAA 242 (393)
Q Consensus 190 ~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~DL~~~~iAAv 242 (393)
.. . + .-+... ..+=++.||+|+++..+ |++|.+. +.+.-+++|
T Consensus 67 ~a---~-n---~g~~~a--~~d~v~~lD~D~~~~~~~l~~l~~~-~~~~~v~~v 110 (235)
T cd06434 67 RA---L-A---EGIRHV--TTDIVVLLDSDTVWPPNALPEMLKP-FEDPKVGGV 110 (235)
T ss_pred HH---H-H---HHHHHh--CCCEEEEECCCceeChhHHHHHHHh-ccCCCEeEE
Confidence 01 0 1 011111 46899999999999866 7777765 323334444
No 39
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=52.24 E-value=2.6e+02 Score=28.11 Aligned_cols=106 Identities=10% Similarity=0.172 Sum_probs=55.5
Q ss_pred CceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCCh--HHHHHHHhhCCCCCeEEEechhhhhhhhhcC
Q 016223 108 GMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDM--VSFYKLKVLFPHSNLEFHGQEEVKKVIRTAS 185 (393)
Q Consensus 108 ~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~--~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~ 185 (393)
..|.|++++=+. -..+.-+|.|++... .|. +.+.++ .+.+.+. +-.+++.+.+|+.+++++...+ ...
T Consensus 41 p~VSViiP~~ne-e~~l~~~L~Sl~~q~-Yp~-~EIivv-dd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~-~~G----- 110 (373)
T TIGR03472 41 PPVSVLKPLHGD-EPELYENLASFCRQD-YPG-FQMLFG-VQDPDDPALAVVRRLRADFPDADIDLVIDAR-RHG----- 110 (373)
T ss_pred CCeEEEEECCCC-ChhHHHHHHHHHhcC-CCC-eEEEEE-eCCCCCcHHHHHHHHHHhCCCCceEEEECCC-CCC-----
Confidence 448888877433 356788999998764 443 555443 3333331 2234455556666676653211 000
Q ss_pred CCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHh
Q 016223 186 TGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIG 231 (393)
Q Consensus 186 ~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~ 231 (393)
...+. . +... .+.. ...|=++.+|+|+++..| |+++-.
T Consensus 111 ~~~K~--~---~l~~-~~~~--a~ge~i~~~DaD~~~~p~~L~~lv~ 149 (373)
T TIGR03472 111 PNRKV--S---NLIN-MLPH--ARHDILVIADSDISVGPDYLRQVVA 149 (373)
T ss_pred CChHH--H---HHHH-HHHh--ccCCEEEEECCCCCcChhHHHHHHH
Confidence 00010 0 1111 1222 146889999999999755 445443
No 40
>PHA03097 C-type lectin-like protein; Provisional
Probab=50.24 E-value=20 Score=32.23 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=26.7
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCCceecCC
Q 016223 50 LGLIVFLGLLQFLPATHFRHPSDPFRIWVPFNS 82 (393)
Q Consensus 50 ~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~ 82 (393)
|++++.+..++-.|+++.++...|+..|+.++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~CP~gW~~~~~ 55 (157)
T PHA03097 23 IALIALVIILSCKLSPGDRSGLNCRSGWVGYNN 55 (157)
T ss_pred HHHHHHHHHHhhcCCCCCCcCCCCCCCceeeCC
Confidence 344445556788999999999999999999875
No 41
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=46.22 E-value=1.7e+02 Score=24.26 Aligned_cols=89 Identities=18% Similarity=0.184 Sum_probs=48.1
Q ss_pred hhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCCccchhhhHHHhHH
Q 016223 121 LRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTGVKYSVQNFEEIVP 200 (393)
Q Consensus 121 l~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~~~~~~~~~~~~~r 200 (393)
...+.-++.|+..... ....+.|+. +++. +...+.+++..+ +++++....-. + ...+ . +
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivd-d~s~-~~~~~~~~~~~~--~~~~~~~~~~~---------g-~~~a-~-n--- 67 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVD-NAST-DGSVELLRELFP--EVRLIRNGENL---------G-FGAG-N-N--- 67 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEE-CCCC-chHHHHHHHhCC--CeEEEecCCCc---------C-hHHH-h-h---
Confidence 5678889999988654 234454443 3333 234555665543 45554321100 0 0000 0 0
Q ss_pred HHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhC
Q 016223 201 FVIASVHQSLSKFIYMSPSVIVKGR-VEELIGI 232 (393)
Q Consensus 201 ~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~ 232 (393)
..+... +.+-++++|+|.+...+ ++.+.+.
T Consensus 68 ~~~~~~--~~~~i~~~D~D~~~~~~~l~~~~~~ 98 (166)
T cd04186 68 QGIREA--KGDYVLLLNPDTVVEPGALLELLDA 98 (166)
T ss_pred HHHhhC--CCCEEEEECCCcEECccHHHHHHHH
Confidence 111111 46899999999998755 7777764
No 42
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=45.76 E-value=87 Score=29.34 Aligned_cols=24 Identities=4% Similarity=0.040 Sum_probs=19.6
Q ss_pred CCCeEEEEeCCeeeeCC-hHHHHhC
Q 016223 209 SLSKFIYMSPSVIVKGR-VEELIGI 232 (393)
Q Consensus 209 ~~~KvLYLD~DiIV~gd-L~eL~~~ 232 (393)
..+=++.+|+|+++..| |++|...
T Consensus 73 ~~e~i~~~DaD~~~~~~~l~~l~~~ 97 (244)
T cd04190 73 DPEFILLVDADTKFDPDSIVQLYKA 97 (244)
T ss_pred CCCEEEEECCCCcCCHhHHHHHHHH
Confidence 56889999999999876 6777753
No 43
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=44.52 E-value=4e+02 Score=29.72 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=59.7
Q ss_pred CceEEEEEecccchhhhHHHHHHHHHhCCCC-CceEEEEEecCCCCChH-------------HHHHHHhhCCCCCeEEEe
Q 016223 108 GMVHIVSWMQCLDLRLLAVLVNSTLSGSRYP-DLLHFHLFVPKGSEDMV-------------SFYKLKVLFPHSNLEFHG 173 (393)
Q Consensus 108 ~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~-~~i~fhii~~~~~~~~~-------------~~~kLk~l~~~~~i~v~~ 173 (393)
..|.|++.+=+.-..-+..++.|++.- +.| +++.++|+.+ ++.+.. ....++++..+.++.++.
T Consensus 131 P~VsViIP~yNE~~~iv~~tl~s~~~~-dYP~~~~eIiVvDD-gStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~ 208 (713)
T TIGR03030 131 PTVDVFIPTYNEDLEIVATTVLAAKNM-DYPADKFRVWILDD-GGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYIT 208 (713)
T ss_pred CeeEEEEcCCCCCHHHHHHHHHHHHhC-CCCccceEEEEEEC-cCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEE
Confidence 469998887544343445677887654 444 4677776643 322211 123444444444555543
Q ss_pred chhhhhhhhhcCCCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhCCCCCCeEEEEc
Q 016223 174 QEEVKKVIRTASTGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGIDLSNYAIAAAD 243 (393)
Q Consensus 174 ~~~v~~~i~~~~~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~DL~~~~iAAv~ 243 (393)
.++ + ...+ + .....-++. -+.+=++.+|||.++..| |+++...=.++.-+|+|.
T Consensus 209 r~~--n------~~~K-A-gnLN~al~~------a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vq 263 (713)
T TIGR03030 209 RPR--N------VHAK-A-GNINNALKH------TDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQ 263 (713)
T ss_pred CCC--C------CCCC-h-HHHHHHHHh------cCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEe
Confidence 210 0 0000 0 011111121 145899999999999876 456554322343466663
No 44
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=43.88 E-value=1e+02 Score=27.49 Aligned_cols=62 Identities=18% Similarity=-0.001 Sum_probs=42.8
Q ss_pred CCCCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEe
Q 016223 105 QDDGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHG 173 (393)
Q Consensus 105 ~~~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~ 173 (393)
.....|-+|.++++++.....-+|.||-..-++. . +-|+ +.+.++...++|++.++ +++|..
T Consensus 57 ~n~~~vvfVSa~S~~h~~~~~~~i~si~~~~P~~-k--~ilY--~LgL~~~~i~~L~~~~~--n~evr~ 118 (142)
T PF07801_consen 57 KNSSDVVFVSATSDNHFNESMKSISSIRKFYPNH-K--IILY--DLGLSEEQIKKLKKNFC--NVEVRK 118 (142)
T ss_pred ccCCccEEEEEecchHHHHHHHHHHHHHHHCCCC-c--EEEE--eCCCCHHHHHHHHhcCC--ceEEEE
Confidence 3455677889999999999999999998887653 2 3333 44556667778877544 455543
No 45
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=42.48 E-value=2.7e+02 Score=25.46 Aligned_cols=105 Identities=10% Similarity=0.030 Sum_probs=57.0
Q ss_pred CCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCC
Q 016223 107 DGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTAST 186 (393)
Q Consensus 107 ~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~ 186 (393)
...|-|++.+=+. ...+.-+|.|++.....+..+.+.|+ ++.+. +...+.++++... ++.++..+. . .
T Consensus 28 ~~~isVvip~~n~-~~~l~~~l~si~~q~~~~~~~eiivv-dd~s~-d~t~~~~~~~~~~-~v~~i~~~~---~-----~ 95 (251)
T cd06439 28 LPTVTIIIPAYNE-EAVIEAKLENLLALDYPRDRLEIIVV-SDGST-DGTAEIAREYADK-GVKLLRFPE---R-----R 95 (251)
T ss_pred CCEEEEEEecCCc-HHHHHHHHHHHHhCcCCCCcEEEEEE-ECCCC-ccHHHHHHHHhhC-cEEEEEcCC---C-----C
Confidence 3457788776433 47788899999876433222444333 33333 3355556554433 555553321 0 0
Q ss_pred CccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhC
Q 016223 187 GVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGI 232 (393)
Q Consensus 187 ~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~ 232 (393)
+. ..+ . ...+... .-+=++++|+|.++..+ |++|++.
T Consensus 96 g~--~~a-~----n~gi~~a--~~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 96 GK--AAA-L----NRALALA--TGEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred Ch--HHH-H----HHHHHHc--CCCEEEEEccccCcCHHHHHHHHHH
Confidence 10 000 1 1112211 24789999999999755 7888876
No 46
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=39.09 E-value=3.6e+02 Score=25.91 Aligned_cols=92 Identities=15% Similarity=0.095 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeE-EEechhhhhhhhhcCCCccchhhhHHHhHHH
Q 016223 123 LLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLE-FHGQEEVKKVIRTASTGVKYSVQNFEEIVPF 201 (393)
Q Consensus 123 ~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~-v~~~~~v~~~i~~~~~~~~~~~~~~~~~~r~ 201 (393)
-+--.+.|+-..... .++.+ |+.+.+.+....+.|+++....... ++..+ . ....+..+..+|
T Consensus 18 ~l~~~l~~l~~~~~~-~~~ei--Ivvd~~s~~~~~~~l~~~~~~~~~~~~i~~~-~--------~~~~f~~a~arN---- 81 (281)
T PF10111_consen 18 RLRNCLESLSQFQSD-PDFEI--IVVDDGSSDEFDEELKKLCEKNGFIRYIRHE-D--------NGEPFSRAKARN---- 81 (281)
T ss_pred HHHHHHHHHHhcCCC-CCEEE--EEEECCCchhHHHHHHHHHhccCceEEEEcC-C--------CCCCcCHHHHHH----
Confidence 344446666554333 34444 4434443433346777776655544 22211 0 111223333333
Q ss_pred HhhhccCCCCeEEEEeCCeeee-CChHHHHh
Q 016223 202 VIASVHQSLSKFIYMSPSVIVK-GRVEELIG 231 (393)
Q Consensus 202 ~LP~l~p~~~KvLYLD~DiIV~-gdL~eL~~ 231 (393)
.....- .-+-+++||+|+++- +-|+++.+
T Consensus 82 ~g~~~A-~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 82 IGAKYA-RGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HHHHHc-CCCEEEEEcCCeeeCHHHHHHHHH
Confidence 222111 468999999999996 55667776
No 47
>smart00528 HNS Domain in histone-like proteins of HNS family.
Probab=37.58 E-value=20 Score=25.75 Aligned_cols=22 Identities=14% Similarity=0.326 Sum_probs=16.1
Q ss_pred cCCCCCCCCCCCCCceecCCCC
Q 016223 63 PATHFRHPSDPFRIWVPFNSNT 84 (393)
Q Consensus 63 ~a~~~r~~~~~~~~~~~~~~~~ 84 (393)
-+++||||.++..+|-=--+.+
T Consensus 7 ~~~KYr~p~~~g~tWsGrGr~P 28 (46)
T smart00528 7 RPAKYRYPDNNGETWSGRGRTP 28 (46)
T ss_pred CCCccCCCCCCCCcccCCCCCC
Confidence 3578999999999995444433
No 48
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=36.64 E-value=2.8e+02 Score=24.28 Aligned_cols=90 Identities=14% Similarity=0.083 Sum_probs=47.7
Q ss_pred hhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCC--CeEEEechhhhhhhhhcCCCccchhhhHHHhH
Q 016223 122 RLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHS--NLEFHGQEEVKKVIRTASTGVKYSVQNFEEIV 199 (393)
Q Consensus 122 ~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~--~i~v~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 199 (393)
..+.-+|.|++..+. + .+.+.|+. +++.+ ...+.++++.... .+.++..+. ..+ .... . +..
T Consensus 11 ~~l~~~l~sl~~q~~-~-~~eiiVvd-dgS~d-~t~~~~~~~~~~~~~~~~~~~~~~---------~~G-~~~~-~-n~g 74 (214)
T cd04196 11 KYLREQLDSILAQTY-K-NDELIISD-DGSTD-GTVEIIKEYIDKDPFIIILIRNGK---------NLG-VARN-F-ESL 74 (214)
T ss_pred HHHHHHHHHHHhCcC-C-CeEEEEEe-CCCCC-CcHHHHHHHHhcCCceEEEEeCCC---------Ccc-HHHH-H-HHH
Confidence 678889999988653 2 35555443 33322 3455566554332 233332210 001 0101 0 111
Q ss_pred HHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhC
Q 016223 200 PFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGI 232 (393)
Q Consensus 200 r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~ 232 (393)
+... +.+=+++||+|.+...+ |+.+.+.
T Consensus 75 -~~~~----~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 75 -LQAA----DGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred -HHhC----CCCEEEEECCCcccChhHHHHHHHH
Confidence 1112 56889999999777644 9999987
No 49
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=34.68 E-value=2e+02 Score=28.67 Aligned_cols=118 Identities=9% Similarity=0.077 Sum_probs=60.0
Q ss_pred CCceEEEEEecccchhhhHHHHHHHHHhCCC--CCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEech-hhhhhh--
Q 016223 107 DGMVHIVSWMQCLDLRLLAVLVNSTLSGSRY--PDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQE-EVKKVI-- 181 (393)
Q Consensus 107 ~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~--~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~-~v~~~i-- 181 (393)
++.|.|++=++......+.-.|..++..+.. ..++.||++.......... ..... .......+-... ...+..
T Consensus 24 ~GPiSvAvf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~H~v~~~~~~~~~~-~~~~~-~~~~~~~C~~~~~~~~~~~~~ 101 (317)
T PF13896_consen 24 DGPISVAVFVPGPDAKQALDAISYLLRCCCPRVRKNVTFHLVFPNSHFPTSC-DSIEA-NLSSPFSCSDFVRLLSELTSR 101 (317)
T ss_pred CCCEEEEEEecchhHHHHHHHHHHHHHhcCHHhHhhEEEEEEeecccCcccc-ccccc-ccCCCCCcCchhhhHHHHhhh
Confidence 5678888777766666666677777544321 1468999998654322110 11111 001111111000 011110
Q ss_pred ---hhcCCCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCChHHHHh
Q 016223 182 ---RTASTGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRVEELIG 231 (393)
Q Consensus 182 ---~~~~~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL~eL~~ 231 (393)
........|+.-..+|.+|.... -+=++-+|.|++...++.+-+.
T Consensus 102 ~~~~~~~~~~~YPiN~LRNvAr~~a~-----T~~v~~~DvD~~ps~~l~~~l~ 149 (317)
T PF13896_consen 102 ENNYDPAPNALYPINLLRNVARSGAR-----TDYVFLLDVDFLPSPGLYEKLL 149 (317)
T ss_pred hhhcccccCCCCChHHHHHHHHHhcC-----cceEEEecceeeeCcchHHHHH
Confidence 00112223443334555554433 4789999999999999887553
No 50
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=33.60 E-value=2.9e+02 Score=26.45 Aligned_cols=101 Identities=13% Similarity=0.089 Sum_probs=50.9
Q ss_pred EEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhC---CCCCeEEEechhhhhhhhhcCCCc
Q 016223 112 IVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLF---PHSNLEFHGQEEVKKVIRTASTGV 188 (393)
Q Consensus 112 I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~---~~~~i~v~~~~~v~~~i~~~~~~~ 188 (393)
|++.+=+.-...+.-+|.|++.++.......+ |++++.+.+ .....+.+.. ...+++++..+. ..
T Consensus 2 IIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EI-IvVDd~S~d-~t~~~~~~~~~~~~~~~v~vi~~~~----------n~ 69 (299)
T cd02510 2 VIIIFHNEALSTLLRTVHSVINRTPPELLKEI-ILVDDFSDK-PELKLLLEEYYKKYLPKVKVLRLKK----------RE 69 (299)
T ss_pred EEEEEecCcHHHHHHHHHHHHhcCchhcCCEE-EEEECCCCc-hHHHHHHHHHHhhcCCcEEEEEcCC----------CC
Confidence 45555444347888899999987653222233 233444433 3434443311 112455553211 00
Q ss_pred cchhhhHHHh-HHHHhhhccCCCCeEEEEeCCeeee-CChHHHHhC
Q 016223 189 KYSVQNFEEI-VPFVIASVHQSLSKFIYMSPSVIVK-GRVEELIGI 232 (393)
Q Consensus 189 ~~~~~~~~~~-~r~~LP~l~p~~~KvLYLD~DiIV~-gdL~eL~~~ 232 (393)
.+..+ .+. ++. . .-+=+++||+|+++. +-|++|.+.
T Consensus 70 G~~~a--~N~g~~~--A----~gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 70 GLIRA--RIAGARA--A----TGDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred CHHHH--HHHHHHH--c----cCCEEEEEeCCcccCccHHHHHHHH
Confidence 11111 111 111 1 357899999999995 567777763
No 51
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=32.13 E-value=2.5e+02 Score=29.51 Aligned_cols=113 Identities=13% Similarity=0.045 Sum_probs=59.7
Q ss_pred EEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCC--CeEEEechhhhhhhhhcCCCcc
Q 016223 112 IVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHS--NLEFHGQEEVKKVIRTASTGVK 189 (393)
Q Consensus 112 I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~--~i~v~~~~~v~~~i~~~~~~~~ 189 (393)
|++..-+.=.-.|.-++.|++..++. +-++=-|+++|.+..+--+++|.+..... -+.|+..++-...|.. .+.+.
T Consensus 159 VviVFHNEGws~LmRTVHSVi~RsP~-~~l~eivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~REGLI~a-RSiGA 236 (603)
T KOG3737|consen 159 VVIVFHNEGWSTLMRTVHSVIKRSPR-KYLAEIVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERREGLIQA-RSIGA 236 (603)
T ss_pred EEEEEecCccHHHHHHHHHHHhcCcH-HhhheEEEeccCCccHHHHHHHHHHHHHhcCEEEEEecchhhhhhhh-hccch
Confidence 33333333355888899999998774 44555666777665444466666543322 2344433322223322 11110
Q ss_pred chhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhCCCCCCeEEEE
Q 016223 190 YSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGIDLSNYAIAAA 242 (393)
Q Consensus 190 ~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~DL~~~~iAAv 242 (393)
. .. .-+-+||||+-.=|+.+ +.+|..---.+..+..|
T Consensus 237 ----~------~a------tGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTV 274 (603)
T KOG3737|consen 237 ----Q------KA------TGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTV 274 (603)
T ss_pred ----h------hc------cccEEEEEecceeeecccccccccccccCceEEEE
Confidence 0 00 23678999999888766 34444322234444444
No 52
>COG5486 Predicted metal-binding integral membrane protein [Function unknown]
Probab=31.17 E-value=64 Score=31.41 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=30.7
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHhhh-ccccCCC
Q 016223 30 THGPVLEQAPTPKPIFQFIALGLIVFLGLL-QFLPATH 66 (393)
Q Consensus 30 ~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~-~~~~a~~ 66 (393)
.....+.|+|++|-.....+++++=.++++ .++|++.
T Consensus 65 ~~~~~~~~~p~~ws~v~aa~~~~mW~vMmvamMlPsaa 102 (283)
T COG5486 65 FFAACLSPAPRGWSIVPAAALLLMWTVMMVAMMLPSAA 102 (283)
T ss_pred chhHhhcCCCCccchhHHHHHHHHHHHHHHHHhCcccc
Confidence 556678899999999998888888777777 6899875
No 53
>PRK11204 N-glycosyltransferase; Provisional
Probab=29.46 E-value=6e+02 Score=25.62 Aligned_cols=112 Identities=15% Similarity=0.067 Sum_probs=58.4
Q ss_pred CceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC-CCeEEEechhhhhhhhhcCC
Q 016223 108 GMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH-SNLEFHGQEEVKKVIRTAST 186 (393)
Q Consensus 108 ~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~-~~i~v~~~~~v~~~i~~~~~ 186 (393)
..|.|++.+=+. -..+.-++.|++..+ .| ++.+.|+ ++++.+ ...+.++++..+ .+++++..++ ..
T Consensus 54 p~vsViIp~yne-~~~i~~~l~sl~~q~-yp-~~eiiVv-dD~s~d-~t~~~l~~~~~~~~~v~~i~~~~--------n~ 120 (420)
T PRK11204 54 PGVSILVPCYNE-GENVEETISHLLALR-YP-NYEVIAI-NDGSSD-NTGEILDRLAAQIPRLRVIHLAE--------NQ 120 (420)
T ss_pred CCEEEEEecCCC-HHHHHHHHHHHHhCC-CC-CeEEEEE-ECCCCc-cHHHHHHHHHHhCCcEEEEEcCC--------CC
Confidence 468888877444 356788899988653 34 3555444 333332 344555544322 2455554211 00
Q ss_pred CccchhhhHHHh-HHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhCCCCCCeEEEE
Q 016223 187 GVKYSVQNFEEI-VPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGIDLSNYAIAAA 242 (393)
Q Consensus 187 ~~~~~~~~~~~~-~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~DL~~~~iAAv 242 (393)
+. ... .+. ++. . ..+=++.+|+|.++..| |+++.+.=.++.-+|+|
T Consensus 121 Gk--a~a--ln~g~~~--a----~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v 168 (420)
T PRK11204 121 GK--ANA--LNTGAAA--A----RSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAV 168 (420)
T ss_pred CH--HHH--HHHHHHH--c----CCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEE
Confidence 10 000 111 111 1 46899999999999766 66666532223334444
No 54
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=28.98 E-value=8.6e+02 Score=27.24 Aligned_cols=122 Identities=8% Similarity=0.125 Sum_probs=62.0
Q ss_pred CCCceEEEEEecccch----hhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHH------HHHHHhhCC-CCCeEEEec
Q 016223 106 DDGMVHIVSWMQCLDL----RLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVS------FYKLKVLFP-HSNLEFHGQ 174 (393)
Q Consensus 106 ~~~~I~I~~~~D~~yl----~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~------~~kLk~l~~-~~~i~v~~~ 174 (393)
....+.|++.+=+... ..+.+++.|+...+. ++++.|+++. |.+.++.. ..+|.+-.+ ..++.+...
T Consensus 122 ~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~-~~~~e~~vLd-D~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R 199 (691)
T PRK05454 122 PEARTAILMPIYNEDPARVFAGLRAMYESLAATGH-GAHFDFFILS-DTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR 199 (691)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCC-CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 3467888877744443 356677778876543 3567886664 33322211 223443333 223333221
Q ss_pred hhhhhhhhhcCCCccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhCCCCCCeEEEEc
Q 016223 175 EEVKKVIRTASTGVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGIDLSNYAIAAAD 243 (393)
Q Consensus 175 ~~v~~~i~~~~~~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~DL~~~~iAAv~ 243 (393)
. .+ .....+ ....+++..- ..+|=++-||+|.++.+| |.+|...=..+--+|+|.
T Consensus 200 ~--~n---~~~KaG-----Nl~~~~~~~~----~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 200 R--RN---VGRKAG-----NIADFCRRWG----GAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred C--cC---CCccHH-----HHHHHHHhcC----CCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 1 10 000001 1112222211 256899999999999988 667765311233477776
No 55
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=27.49 E-value=49 Score=31.57 Aligned_cols=29 Identities=24% Similarity=0.472 Sum_probs=21.9
Q ss_pred HhhhccCCCCeEEEEeCCeeeeC---ChHHHH
Q 016223 202 VIASVHQSLSKFIYMSPSVIVKG---RVEELI 230 (393)
Q Consensus 202 ~LP~l~p~~~KvLYLD~DiIV~g---dL~eL~ 230 (393)
.+..++|+.+=||+||+||-|.. .|+|..
T Consensus 34 vva~~L~~~~~vlflDaDigVvNp~~~iEefi 65 (222)
T PF03314_consen 34 VVAKILPEYDWVLFLDADIGVVNPNRRIEEFI 65 (222)
T ss_pred HHHHHhccCCEEEEEcCCceeecCcccHHHhc
Confidence 35556667899999999999864 466655
No 56
>PLN02248 cellulose synthase-like protein
Probab=27.37 E-value=3.7e+02 Score=31.78 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=46.5
Q ss_pred ceecCCCCCCcc-c---cCCCCCCCCCcccCCCCCCceEEEEEecccchhhhHHHHHHHHHh--CCCC-CceEEEEEecC
Q 016223 77 WVPFNSNTSFSK-T---RDSGDRNSGSISSISQDDGMVHIVSWMQCLDLRLLAVLVNSTLSG--SRYP-DLLHFHLFVPK 149 (393)
Q Consensus 77 ~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~I~I~~~~D~~yl~~laV~I~Sil~N--~~~~-~~i~fhii~~~ 149 (393)
|-|+++.+.-++ + +.-|..|+.+.+ +-..|+|++|+=+-+..+-.+++|.+|+- .+.| +++..|+ .|
T Consensus 336 w~Pv~R~t~~~rL~~r~e~~~~~~p~g~s----~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYv--SD 409 (1135)
T PLN02248 336 LCPINRATDLAVLKEKFETPSPSNPTGRS----DLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYL--SD 409 (1135)
T ss_pred ccccccccCHHHHHHHhccccccCCCCcc----cCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEE--ec
Confidence 467777664222 1 223345655432 35789999999777777777777766654 2333 4565654 34
Q ss_pred CCCChHHHHHHHh
Q 016223 150 GSEDMVSFYKLKV 162 (393)
Q Consensus 150 ~~~~~~~~~kLk~ 162 (393)
++-+...++.|.+
T Consensus 410 DGgS~LTf~AL~E 422 (1135)
T PLN02248 410 DGGALLTFEAMAE 422 (1135)
T ss_pred CCchHHHHHHHHH
Confidence 4434556666654
No 57
>PF15149 CATSPERB: Cation channel sperm-associated protein subunit beta protein family
Probab=26.82 E-value=16 Score=38.83 Aligned_cols=45 Identities=33% Similarity=0.587 Sum_probs=36.4
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhhc---cccCCCCCCCCCCCCCcee
Q 016223 35 LEQAPTPKPIFQFIALGLIVFLGLLQ---FLPATHFRHPSDPFRIWVP 79 (393)
Q Consensus 35 ~~~~p~~~~~~~~~a~~~~~~~~~~~---~~~a~~~r~~~~~~~~~~~ 79 (393)
+|.+|-|-||-.++|.+.-|++|+|= |+=--|.+||-+.+++|+-
T Consensus 483 VDe~PLpfPg~~LIa~~tAvvlGglif~~f~~ql~~ih~~~~~~~~~~ 530 (540)
T PF15149_consen 483 VDEVPLPFPGHTLIAVATAVVLGGLIFMAFMFQLRNIHPWDAFKKWIR 530 (540)
T ss_pred eccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHh
Confidence 57899999999999999888888873 4444578899888887753
No 58
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=26.38 E-value=5.7e+02 Score=26.44 Aligned_cols=105 Identities=10% Similarity=-0.021 Sum_probs=54.5
Q ss_pred CCceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC-CCeEEEechhhhhhhhhcC
Q 016223 107 DGMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH-SNLEFHGQEEVKKVIRTAS 185 (393)
Q Consensus 107 ~~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~-~~i~v~~~~~v~~~i~~~~ 185 (393)
...|.|++.+=+.- ..+.-+|.|++..+-.++.+.+.|+ ++++ .+...+.+++.... .++.++..+. +
T Consensus 48 ~P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVV-Dd~S-tD~T~~il~~~~~~~~~v~v~~~~~--~------ 116 (439)
T TIGR03111 48 LPDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILA-NNQS-TDDSFQVFCRAQNEFPGLSLRYMNS--D------ 116 (439)
T ss_pred CCCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEE-ECCC-ChhHHHHHHHHHHhCCCeEEEEeCC--C------
Confidence 34588888875543 7888999999875433334445444 3333 33344444433211 2344432210 0
Q ss_pred CCccchhhhHHHh-HHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhC
Q 016223 186 TGVKYSVQNFEEI-VPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGI 232 (393)
Q Consensus 186 ~~~~~~~~~~~~~-~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~ 232 (393)
.+. +.+ .++ +.. . .-+=++.+|+|.++..| |+++...
T Consensus 117 -~Gk-a~A--lN~gl~~--s----~g~~v~~~DaD~~~~~d~L~~l~~~ 155 (439)
T TIGR03111 117 -QGK-AKA--LNAAIYN--S----IGKYIIHIDSDGKLHKDAIKNMVTR 155 (439)
T ss_pred -CCH-HHH--HHHHHHH--c----cCCEEEEECCCCCcChHHHHHHHHH
Confidence 010 100 111 111 1 24569999999999754 6666643
No 59
>COG2060 KdpA K+-transporting ATPase, A chain [Inorganic ion transport and metabolism]
Probab=25.26 E-value=61 Score=34.71 Aligned_cols=38 Identities=37% Similarity=0.617 Sum_probs=29.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhhccccCCC
Q 016223 22 SDNPNTDGTHGPVLEQAPTPKPIFQFIALGLIVFLGLLQFLPATH 66 (393)
Q Consensus 22 ~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~~~~a~~ 66 (393)
...+.+.|++.-| -|.+.-+-++.|+++|+|+|+||-.
T Consensus 513 k~~p~~~gTl~Td-------~~lF~gllig~ilivG~LtF~PaLa 550 (560)
T COG2060 513 KTVPATSGTLPTD-------GPLFVGLLIGVILIVGALTFLPALA 550 (560)
T ss_pred cccCCCCCcccCC-------CchhHHHHHHHHHHHHHHHhhHHHH
Confidence 3345556666555 5789999999999999999999843
No 60
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=24.55 E-value=1.1e+03 Score=27.21 Aligned_cols=114 Identities=12% Similarity=0.120 Sum_probs=55.7
Q ss_pred CceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCC
Q 016223 108 GMVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTG 187 (393)
Q Consensus 108 ~~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~ 187 (393)
..|.|++.+=++-...+.-+|.|++.-.-..++++++|+. |++.+ +. +++....++.++...+ + ..
T Consensus 260 P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVD-DgS~D-~t----~~la~~~~v~yI~R~~--n------~~ 325 (852)
T PRK11498 260 PTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILD-DGGRE-EF----RQFAQEVGVKYIARPT--H------EH 325 (852)
T ss_pred CcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEe-CCCCh-HH----HHHHHHCCcEEEEeCC--C------Cc
Confidence 4699998885443334455778877543222456666653 33322 22 2222234555543210 0 00
Q ss_pred ccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCCh-HHHHhCCCCCCeEEEEc
Q 016223 188 VKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGRV-EELIGIDLSNYAIAAAD 243 (393)
Q Consensus 188 ~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gdL-~eL~~~DL~~~~iAAv~ 243 (393)
++ + ......++. . +.|=++.+|||.++..|. +++...=+++.-+|+|.
T Consensus 326 gK-A-GnLN~aL~~--a----~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQ 374 (852)
T PRK11498 326 AK-A-GNINNALKY--A----KGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQ 374 (852)
T ss_pred ch-H-HHHHHHHHh--C----CCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEE
Confidence 00 0 011111222 1 457899999999997665 33332212233366664
No 61
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=24.44 E-value=4.8e+02 Score=22.81 Aligned_cols=100 Identities=19% Similarity=0.080 Sum_probs=50.5
Q ss_pred EEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCCccchh
Q 016223 113 VSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTGVKYSV 192 (393)
Q Consensus 113 ~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~~~~~~ 192 (393)
+.|-++. ..+.-+|.|++..+.. ...+ |++++++. +.....+++.....+++++...+ + .+ ...
T Consensus 3 I~~~n~~--~~l~~~l~sl~~q~~~--~~ei-iivD~~s~-d~t~~~~~~~~~~~~i~~~~~~~--n-------~g-~~~ 66 (202)
T cd04185 3 VVTYNRL--DLLKECLDALLAQTRP--PDHI-IVIDNAST-DGTAEWLTSLGDLDNIVYLRLPE--N-------LG-GAG 66 (202)
T ss_pred EEeeCCH--HHHHHHHHHHHhccCC--CceE-EEEECCCC-cchHHHHHHhcCCCceEEEECcc--c-------cc-hhh
Confidence 3444442 5688899999876432 2333 33334433 33556666665544455543210 0 01 000
Q ss_pred hhHHHhHHHHhhhccCCCCeEEEEeCCeeeeC-ChHHHHhC
Q 016223 193 QNFEEIVPFVIASVHQSLSKFIYMSPSVIVKG-RVEELIGI 232 (393)
Q Consensus 193 ~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~g-dL~eL~~~ 232 (393)
....-+...+. ...+=++.||+|.++.. -|++|.+.
T Consensus 67 -~~n~~~~~a~~---~~~d~v~~ld~D~~~~~~~l~~l~~~ 103 (202)
T cd04185 67 -GFYEGVRRAYE---LGYDWIWLMDDDAIPDPDALEKLLAY 103 (202)
T ss_pred -HHHHHHHHHhc---cCCCEEEEeCCCCCcChHHHHHHHHH
Confidence 01011112221 25689999999999974 45566554
No 62
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=22.97 E-value=5e+02 Score=22.52 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=51.6
Q ss_pred ceEEEEEecccchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHH-HHhhCC-CCCeEEEechhhhhhhhhcCC
Q 016223 109 MVHIVSWMQCLDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYK-LKVLFP-HSNLEFHGQEEVKKVIRTAST 186 (393)
Q Consensus 109 ~I~I~~~~D~~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~k-Lk~l~~-~~~i~v~~~~~v~~~i~~~~~ 186 (393)
.+-|++.+-+.-+..+.-++.|++..+.. .+.+.| +.+++.+ ...+. ++.... ...++++..+.
T Consensus 2 ~vsiii~~~n~~~~~l~~~l~sl~~q~~~--~~eiiv-vd~gs~d-~~~~~~~~~~~~~~~~~~~~~~~~---------- 67 (202)
T cd04184 2 LISIVMPVYNTPEKYLREAIESVRAQTYP--NWELCI-ADDASTD-PEVKRVLKKYAAQDPRIKVVFREE---------- 67 (202)
T ss_pred eEEEEEecccCcHHHHHHHHHHHHhCcCC--CeEEEE-EeCCCCC-hHHHHHHHHHHhcCCCEEEEEccc----------
Confidence 36677777655568899999999876532 233333 3333333 22233 332221 23455543210
Q ss_pred CccchhhhHHHhHHHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhC
Q 016223 187 GVKYSVQNFEEIVPFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGI 232 (393)
Q Consensus 187 ~~~~~~~~~~~~~r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~ 232 (393)
...+... ...-++ .+ ..+=++.||+|.++..+ |+++.+.
T Consensus 68 ~~g~~~a-~n~g~~--~a----~~d~i~~ld~D~~~~~~~l~~~~~~ 107 (202)
T cd04184 68 NGGISAA-TNSALE--LA----TGEFVALLDHDDELAPHALYEVVKA 107 (202)
T ss_pred CCCHHHH-HHHHHH--hh----cCCEEEEECCCCcCChHHHHHHHHH
Confidence 0111111 000011 11 34788999999999654 6666553
No 63
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=22.85 E-value=33 Score=28.57 Aligned_cols=28 Identities=29% Similarity=0.441 Sum_probs=23.5
Q ss_pred CCCCchhHHHHHHHHHHHhhhccccCCC
Q 016223 39 PTPKPIFQFIALGLIVFLGLLQFLPATH 66 (393)
Q Consensus 39 p~~~~~~~~~a~~~~~~~~~~~~~~a~~ 66 (393)
+-|+|+.+-.|..+++|+|.+=++||.-
T Consensus 34 ~LP~~l~~~~aai~MIf~Gi~lMlPAav 61 (96)
T PF07214_consen 34 SLPAPLSTPTAAIAMIFVGIGLMLPAAV 61 (96)
T ss_pred cCcccccCchHHHHHHHHHHHHHHHHHH
Confidence 3578888888999999999998999864
No 64
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=22.57 E-value=6.2e+02 Score=26.76 Aligned_cols=107 Identities=12% Similarity=0.106 Sum_probs=49.6
Q ss_pred cchhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCCCeEEEechhhhhhhhhcCCCccchhhhH--H
Q 016223 119 LDLRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHSNLEFHGQEEVKKVIRTASTGVKYSVQNF--E 196 (393)
Q Consensus 119 ~yl~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~~i~v~~~~~v~~~i~~~~~~~~~~~~~~--~ 196 (393)
|=..++--+|.||+.+....+. |.|++..++......+.++..- ..++.+...+.. .+.+. +..+-....| .
T Consensus 103 NRp~yl~r~L~sLl~~rp~~~~--fpIiVSQDg~~~~~~~vi~~y~--~~v~~i~~~~~~-~i~~~-~~~~~~~~y~~IA 176 (434)
T PF03071_consen 103 NRPDYLRRTLDSLLKYRPSAEK--FPIIVSQDGDDEEVAEVIKSYG--DQVTYIQHPDFS-PITIP-PKEKKFKGYYKIA 176 (434)
T ss_dssp S-TT-HHHHHHHHHHH-S-TTT--S-EEEEE-TT-HHHHHHHHGGG--GGSEEEE-S--S-------TT-GGGHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCCCC--ccEEEEecCCcHHHHHHHHHhh--hhheeeecCCcC-CceeC-cccccccchHHHH
Confidence 3356677899999998644343 4555543333334455555431 123332211111 12111 1111111112 2
Q ss_pred HhHHHHhhhccC--CCCeEEEEeCCeeeeCChHHHHh
Q 016223 197 EIVPFVIASVHQ--SLSKFIYMSPSVIVKGRVEELIG 231 (393)
Q Consensus 197 ~~~r~~LP~l~p--~~~KvLYLD~DiIV~gdL~eL~~ 231 (393)
..++.-|-.+|. .+++||-|.-|+.|--|.=+.|+
T Consensus 177 ~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 177 RHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp HHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 334555777773 57999999999999988765554
No 65
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=22.21 E-value=6.9e+02 Score=23.84 Aligned_cols=35 Identities=9% Similarity=0.149 Sum_probs=25.9
Q ss_pred CCCeEEEEeCCeeeeCC-hHHHHhCCCCCCeEEEEc
Q 016223 209 SLSKFIYMSPSVIVKGR-VEELIGIDLSNYAIAAAD 243 (393)
Q Consensus 209 ~~~KvLYLD~DiIV~gd-L~eL~~~DL~~~~iAAv~ 243 (393)
..+=++-+|||+++..| |.++...=..+.-+|+|.
T Consensus 95 ~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq 130 (254)
T cd04191 95 RYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQ 130 (254)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEe
Confidence 46889999999999855 777776433344578886
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=22.17 E-value=4e+02 Score=21.02 Aligned_cols=86 Identities=7% Similarity=-0.071 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCC-CCeEEEechhhhhhhhhcCCCccchhhhHHHhH
Q 016223 121 LRLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPH-SNLEFHGQEEVKKVIRTASTGVKYSVQNFEEIV 199 (393)
Q Consensus 121 l~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~-~~i~v~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 199 (393)
...+..++.|+..... ....++|+.... ++...+.+++.... ..+..+.... ..+ .. ... +
T Consensus 9 ~~~l~~~l~s~~~~~~--~~~~i~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------~~g-~~-~~~-~-- 70 (156)
T cd00761 9 EPYLERCLESLLAQTY--PNFEVIVVDDGS--TDGTLEILEEYAKKDPRVIRVINEE---------NQG-LA-AAR-N-- 70 (156)
T ss_pred HHHHHHHHHHHHhCCc--cceEEEEEeCCC--CccHHHHHHHHHhcCCCeEEEEecC---------CCC-hH-HHH-H--
Confidence 5778889999988764 235566554333 23344555554322 1122211100 000 00 011 1
Q ss_pred HHHhhhccCCCCeEEEEeCCeeeeCChH
Q 016223 200 PFVIASVHQSLSKFIYMSPSVIVKGRVE 227 (393)
Q Consensus 200 r~~LP~l~p~~~KvLYLD~DiIV~gdL~ 227 (393)
..+... +.+.++++|+|.++..+.-
T Consensus 71 -~~~~~~--~~d~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 71 -AGLKAA--RGEYILFLDADDLLLPDWL 95 (156)
T ss_pred -HHHHHh--cCCEEEEECCCCccCccHH
Confidence 111211 4689999999999976643
No 67
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=21.30 E-value=4.5e+02 Score=21.32 Aligned_cols=90 Identities=13% Similarity=0.087 Sum_probs=45.8
Q ss_pred hhhHHHHHHHHHhCCCCCceEEEEEecCCCCChHHHHHHHhhCCCC--CeEEEechhhhhhhhhcCCCccchhhhHHHhH
Q 016223 122 RLLAVLVNSTLSGSRYPDLLHFHLFVPKGSEDMVSFYKLKVLFPHS--NLEFHGQEEVKKVIRTASTGVKYSVQNFEEIV 199 (393)
Q Consensus 122 ~~laV~I~Sil~N~~~~~~i~fhii~~~~~~~~~~~~kLk~l~~~~--~i~v~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 199 (393)
..+.-+|.|++..+.. ...+.|+. +.+ ++...+.+++..... .+.++.... ..+. . ......+
T Consensus 10 ~~l~~~l~sl~~q~~~--~~~iivvd-d~s-~d~t~~~~~~~~~~~~~~~~~~~~~~---------~~g~-~-~~~n~~~ 74 (180)
T cd06423 10 AVIERTIESLLALDYP--KLEVIVVD-DGS-TDDTLEILEELAALYIRRVLVVRDKE---------NGGK-A-GALNAGL 74 (180)
T ss_pred HHHHHHHHHHHhCCCC--ceEEEEEe-CCC-ccchHHHHHHHhccccceEEEEEecc---------cCCc-h-HHHHHHH
Confidence 7888899999986542 34555543 333 233455555544322 122221110 0010 0 0111111
Q ss_pred HHHhhhccCCCCeEEEEeCCeeeeCC-hHHHHhC
Q 016223 200 PFVIASVHQSLSKFIYMSPSVIVKGR-VEELIGI 232 (393)
Q Consensus 200 r~~LP~l~p~~~KvLYLD~DiIV~gd-L~eL~~~ 232 (393)
+. . ..+=++.+|+|.++..+ |++++..
T Consensus 75 ~~----~--~~~~i~~~D~D~~~~~~~l~~~~~~ 102 (180)
T cd06423 75 RH----A--KGDIVVVLDADTILEPDALKRLVVP 102 (180)
T ss_pred Hh----c--CCCEEEEECCCCCcChHHHHHHHHH
Confidence 11 1 46789999999999755 6777343
No 68
>PF00816 Histone_HNS: H-NS histone family Partial NMR structure.; InterPro: IPR001801 The histone-like nucleoid-structuring (H-NS) protein belongs to a family of bacterial proteins that play a role in the formation of nucleoid structure and affect gene expression under certain conditions [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2LEV_A 1HNS_A 1LR1_B 1HNR_A 1NI8_A 1OV9_A 2JR1_A 3NR7_A 2L93_A 2L92_A.
Probab=20.26 E-value=26 Score=28.40 Aligned_cols=16 Identities=25% Similarity=0.746 Sum_probs=13.3
Q ss_pred CCCCCCCCCCCCCcee
Q 016223 64 ATHFRHPSDPFRIWVP 79 (393)
Q Consensus 64 a~~~r~~~~~~~~~~~ 79 (393)
++.||||.+|..+|--
T Consensus 60 ~~KYr~p~~~g~tWsG 75 (93)
T PF00816_consen 60 PPKYRNPENPGETWSG 75 (93)
T ss_dssp SESEEECSSSSEEECS
T ss_pred CCeEeecCCCCCEeec
Confidence 4579999999999954
No 69
>TIGR00680 kdpA K+-transporting ATPase, KdpA. Kdp is a high affinity ATP-driven K+ transport system in Escherichia coli. It is composed of three membrane-bound subunits, KdpA, KdpB and KdpC and one small peptide, KdpF. KdpA is the K+-transporting subunit of this complex. During assembly of the complex, KdpA and KdpC bind to each other. This interaction is thought to stabilize the complex [PubMed:9858692]. Data indicates that KdpC might connect the KdpA, the K+-transporting subunit, to KdpB, the ATP-hydrolyzing (energy providing) subunit PubMed:9858692].
Probab=20.24 E-value=95 Score=33.61 Aligned_cols=35 Identities=37% Similarity=0.688 Sum_probs=28.4
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhhccccCC
Q 016223 24 NPNTDGTHGPVLEQAPTPKPIFQFIALGLIVFLGLLQFLPAT 65 (393)
Q Consensus 24 ~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~~~~a~ 65 (393)
-|.+.|++.-| -|.|-.+-++.|++++.|.|+||-
T Consensus 517 vp~s~GTl~T~-------~plF~~ll~~vilivgaLtFfPaL 551 (563)
T TIGR00680 517 VPETSGTLPTH-------TPLFVGLTIGAVLIVGALTFLPAL 551 (563)
T ss_pred CCCCCCcccCC-------ChHHHHHHHHHHHHHHHHHHhHHH
Confidence 35666766555 688999999999999999999973
Done!