Query 016224
Match_columns 393
No_of_seqs 800 out of 2360
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 10:00:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 7.3E-41 2.5E-45 316.2 36.8 274 105-388 104-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 2.7E-40 9.1E-45 302.1 38.7 274 106-388 29-320 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 3.2E-38 1.1E-42 290.7 40.5 272 105-386 51-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 1.3E-37 4.4E-42 282.1 38.9 277 105-389 9-302 (304)
5 3frx_A Guanine nucleotide-bind 100.0 2.6E-37 9E-42 282.0 37.7 276 106-390 14-318 (319)
6 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-37 4E-42 296.5 35.3 288 90-391 114-416 (435)
7 2hes_X YDR267CP; beta-propelle 100.0 6.4E-37 2.2E-41 280.8 38.5 283 105-390 10-329 (330)
8 4gqb_B Methylosome protein 50; 100.0 3.4E-37 1.2E-41 284.0 32.8 240 106-391 79-333 (344)
9 2pbi_B Guanine nucleotide-bind 100.0 2.6E-36 9E-41 279.5 38.8 272 105-386 60-354 (354)
10 4ery_A WD repeat-containing pr 100.0 2.5E-36 8.4E-41 274.4 37.8 273 106-388 20-311 (312)
11 2ynn_A Coatomer subunit beta'; 100.0 1.9E-36 6.5E-41 274.4 35.3 244 141-392 4-262 (304)
12 3v7d_B Cell division control p 100.0 7.6E-36 2.6E-40 286.0 41.5 289 91-392 104-424 (464)
13 1erj_A Transcriptional repress 100.0 4.3E-36 1.5E-40 282.0 38.8 281 107-390 62-390 (393)
14 4gga_A P55CDC, cell division c 100.0 9.3E-36 3.2E-40 282.2 41.0 289 95-390 89-396 (420)
15 4aow_A Guanine nucleotide-bind 100.0 5.8E-36 2E-40 274.4 38.4 277 107-391 36-339 (340)
16 3iz6_a 40S ribosomal protein R 100.0 2E-37 6.8E-42 289.8 28.5 280 105-391 62-377 (380)
17 4g56_B MGC81050 protein; prote 100.0 6.5E-37 2.2E-41 283.8 31.1 277 106-390 39-344 (357)
18 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1E-35 3.5E-40 283.9 40.1 289 90-392 101-394 (445)
19 4ggc_A P55CDC, cell division c 100.0 4.9E-35 1.7E-39 265.7 40.6 272 112-390 28-316 (318)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-35 5.6E-40 273.1 37.8 279 108-391 14-337 (345)
21 2xzm_R RACK1; ribosome, transl 100.0 1.7E-35 5.9E-40 272.7 37.4 278 105-391 17-342 (343)
22 1nr0_A Actin interacting prote 100.0 3.8E-35 1.3E-39 291.0 36.4 281 105-390 143-568 (611)
23 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-34 6.1E-39 275.3 39.5 275 105-389 155-442 (445)
24 4aez_A CDC20, WD repeat-contai 100.0 2.3E-34 7.8E-39 270.9 39.6 273 111-392 95-383 (401)
25 1sq9_A Antiviral protein SKI8; 100.0 2E-35 6.7E-40 277.0 31.3 282 106-391 13-397 (397)
26 3zwl_B Eukaryotic translation 100.0 2.9E-34 9.8E-39 265.6 37.5 277 105-391 28-348 (369)
27 1got_B GT-beta; complex (GTP-b 100.0 2.4E-34 8.2E-39 264.8 36.4 244 141-391 46-303 (340)
28 3k26_A Polycomb protein EED; W 100.0 1.2E-35 4.1E-40 274.8 27.3 279 107-389 16-366 (366)
29 1r5m_A SIR4-interacting protei 100.0 3.1E-34 1.1E-38 270.5 35.5 272 108-388 107-424 (425)
30 1vyh_C Platelet-activating fac 100.0 1.4E-34 4.8E-39 273.2 33.1 241 143-392 101-372 (410)
31 3dm0_A Maltose-binding peripla 100.0 3.8E-34 1.3E-38 288.1 37.7 276 106-389 379-693 (694)
32 2pbi_B Guanine nucleotide-bind 100.0 6.3E-34 2.2E-38 263.4 35.3 244 141-391 55-317 (354)
33 1nr0_A Actin interacting prote 100.0 3.9E-34 1.3E-38 283.8 35.8 278 103-391 53-357 (611)
34 3ei3_B DNA damage-binding prot 100.0 2.9E-34 1E-38 268.2 32.4 275 106-389 70-382 (383)
35 3odt_A Protein DOA1; ubiquitin 100.0 2.7E-33 9.4E-38 253.4 37.1 274 105-392 14-299 (313)
36 4e54_B DNA damage-binding prot 100.0 1.5E-34 5E-39 275.2 29.8 281 106-392 116-433 (435)
37 2ymu_A WD-40 repeat protein; u 100.0 2.9E-33 9.8E-38 275.3 38.4 266 106-386 300-577 (577)
38 3gre_A Serine/threonine-protei 100.0 6E-34 2.1E-38 270.8 32.3 275 106-386 60-437 (437)
39 1k8k_C P40, ARP2/3 complex 41 100.0 9.7E-34 3.3E-38 262.8 32.9 282 107-391 6-363 (372)
40 2pm7_B Protein transport prote 100.0 5E-34 1.7E-38 257.6 30.0 243 106-388 6-284 (297)
41 3ow8_A WD repeat-containing pr 100.0 1.1E-33 3.8E-38 258.2 32.4 243 141-392 23-282 (321)
42 3iz6_a 40S ribosomal protein R 100.0 2E-34 7E-39 269.3 25.5 254 130-391 47-331 (380)
43 3i2n_A WD repeat-containing pr 100.0 3.5E-33 1.2E-37 257.5 31.3 277 106-392 15-356 (357)
44 4g56_B MGC81050 protein; prote 100.0 3.1E-33 1.1E-37 259.0 30.5 238 105-348 90-349 (357)
45 1r5m_A SIR4-interacting protei 100.0 7.5E-33 2.6E-37 261.0 33.6 277 105-391 41-363 (425)
46 4ery_A WD repeat-containing pr 100.0 3.1E-32 1.1E-36 247.3 36.1 248 139-392 12-271 (312)
47 4gqb_B Methylosome protein 50; 100.0 1.9E-33 6.5E-38 259.0 28.4 247 132-392 17-292 (344)
48 2ymu_A WD-40 repeat protein; u 100.0 3.9E-32 1.3E-36 267.2 39.3 271 105-389 258-539 (577)
49 2pm9_A Protein WEB1, protein t 100.0 2.3E-34 8E-39 271.2 22.0 279 106-390 64-415 (416)
50 3mmy_A MRNA export factor; mRN 100.0 9.6E-33 3.3E-37 255.2 31.9 280 103-387 33-344 (368)
51 4a11_B DNA excision repair pro 100.0 2.4E-32 8.1E-37 256.4 33.9 281 106-392 40-368 (408)
52 1gxr_A ESG1, transducin-like e 100.0 8.1E-32 2.8E-36 246.1 36.2 269 106-387 48-335 (337)
53 3frx_A Guanine nucleotide-bind 100.0 6.7E-32 2.3E-36 246.2 35.5 239 141-391 8-269 (319)
54 3bg1_A Protein SEC13 homolog; 100.0 2.1E-33 7.1E-38 255.8 24.9 242 106-388 10-292 (316)
55 1erj_A Transcriptional repress 100.0 6.1E-32 2.1E-36 253.7 34.7 231 111-342 125-389 (393)
56 3dwl_C Actin-related protein 2 100.0 1.5E-33 5.1E-38 262.6 23.3 278 108-387 10-377 (377)
57 3v7d_B Cell division control p 100.0 3.1E-31 1.1E-35 254.0 37.3 269 106-386 159-460 (464)
58 3vl1_A 26S proteasome regulato 100.0 8.5E-32 2.9E-36 254.3 33.0 274 112-389 100-419 (420)
59 2hes_X YDR267CP; beta-propelle 100.0 1.9E-31 6.4E-36 244.4 34.0 244 141-390 5-281 (330)
60 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-31 1E-35 244.6 34.2 247 139-389 4-283 (345)
61 3vl1_A 26S proteasome regulato 100.0 9E-32 3.1E-36 254.1 30.7 267 112-389 59-365 (420)
62 2pm9_A Protein WEB1, protein t 100.0 1.3E-32 4.3E-37 259.4 24.7 275 108-391 11-339 (416)
63 2xzm_R RACK1; ribosome, transl 100.0 7.4E-31 2.5E-35 241.7 34.6 242 141-391 12-287 (343)
64 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-32 4.5E-37 266.3 22.9 262 124-389 178-517 (524)
65 3dw8_B Serine/threonine-protei 100.0 2.4E-31 8.1E-36 253.2 30.4 277 105-387 24-444 (447)
66 1yfq_A Cell cycle arrest prote 100.0 6.8E-31 2.3E-35 240.9 31.6 266 107-381 9-315 (342)
67 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-30 6.1E-35 265.5 37.6 277 105-390 9-303 (814)
68 3sfz_A APAF-1, apoptotic pepti 100.0 1.3E-30 4.3E-35 278.5 36.9 236 105-341 611-912 (1249)
69 4aow_A Guanine nucleotide-bind 100.0 3.7E-30 1.3E-34 235.7 34.3 241 141-391 29-288 (340)
70 3jrp_A Fusion protein of prote 100.0 9.9E-31 3.4E-35 242.9 30.7 245 105-389 7-287 (379)
71 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-30 5.1E-35 238.2 31.2 254 104-391 6-339 (351)
72 1gxr_A ESG1, transducin-like e 100.0 1.7E-30 5.7E-35 237.4 31.0 273 107-392 7-299 (337)
73 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-30 8.6E-35 245.9 33.4 236 145-390 128-366 (435)
74 2oaj_A Protein SNI1; WD40 repe 100.0 3E-30 1E-34 265.7 34.5 282 107-391 149-666 (902)
75 1pgu_A Actin interacting prote 100.0 9.2E-30 3.1E-34 251.7 36.6 277 105-390 156-573 (615)
76 1pgu_A Actin interacting prote 100.0 1.5E-29 5E-34 250.3 36.1 276 108-392 17-331 (615)
77 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-29 6.2E-34 233.6 33.4 276 106-390 16-337 (355)
78 4h5i_A Guanine nucleotide-exch 100.0 1.2E-30 4.1E-35 242.4 24.7 270 110-389 15-343 (365)
79 3odt_A Protein DOA1; ubiquitin 100.0 7E-29 2.4E-33 224.3 35.8 243 135-392 3-258 (313)
80 3gre_A Serine/threonine-protei 100.0 3.3E-30 1.1E-34 245.0 27.8 250 133-392 47-362 (437)
81 1yfq_A Cell cycle arrest prote 100.0 3E-29 1E-33 230.0 32.3 243 142-392 3-285 (342)
82 3k26_A Polycomb protein EED; W 100.0 4.4E-30 1.5E-34 237.4 25.7 233 108-341 68-365 (366)
83 3ei3_B DNA damage-binding prot 100.0 1.2E-29 4E-34 236.9 28.9 247 134-392 58-342 (383)
84 1sq9_A Antiviral protein SKI8; 100.0 4.6E-29 1.6E-33 233.6 32.2 247 141-392 7-325 (397)
85 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-29 3.9E-34 238.8 27.9 271 112-391 37-344 (402)
86 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-28 4.9E-33 234.8 35.6 271 109-388 4-390 (450)
87 3sfz_A APAF-1, apoptotic pepti 100.0 3.2E-30 1.1E-34 275.3 26.6 275 107-392 838-1161(1249)
88 3dm0_A Maltose-binding peripla 100.0 4.1E-29 1.4E-33 251.4 33.0 244 141-392 373-635 (694)
89 3i2n_A WD repeat-containing pr 100.0 2.5E-29 8.4E-34 231.7 27.8 238 107-344 63-355 (357)
90 1k8k_C P40, ARP2/3 complex 41 100.0 8.3E-29 2.8E-33 229.6 31.0 238 146-389 4-274 (372)
91 3zwl_B Eukaryotic translation 100.0 1.1E-27 3.7E-32 221.3 38.2 246 141-392 23-307 (369)
92 2pm7_B Protein transport prote 100.0 6.5E-29 2.2E-33 224.1 29.2 205 144-389 3-238 (297)
93 4h5i_A Guanine nucleotide-exch 100.0 8.9E-29 3E-33 229.8 30.8 236 108-343 72-344 (365)
94 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-28 3.8E-33 228.3 31.0 246 133-390 3-272 (355)
95 3mkq_A Coatomer beta'-subunit; 100.0 1.7E-28 5.9E-33 250.8 33.1 243 141-391 4-261 (814)
96 2oaj_A Protein SNI1; WD40 repe 100.0 7.3E-28 2.5E-32 247.9 37.1 277 106-391 14-385 (902)
97 3dw8_B Serine/threonine-protei 100.0 1.5E-29 5.3E-34 240.6 22.6 240 148-392 26-376 (447)
98 2xyi_A Probable histone-bindin 100.0 1.3E-28 4.6E-33 233.7 28.7 254 104-390 123-411 (430)
99 3jro_A Fusion protein of prote 100.0 4.4E-29 1.5E-33 253.1 26.4 244 106-389 6-285 (753)
100 4a11_B DNA excision repair pro 100.0 7.3E-29 2.5E-33 232.6 22.8 260 128-392 22-326 (408)
101 1l0q_A Surface layer protein; 100.0 1.8E-26 6.1E-31 215.8 38.1 257 122-392 5-278 (391)
102 4e54_B DNA damage-binding prot 100.0 1.5E-28 5E-33 233.8 23.0 244 141-392 110-390 (435)
103 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-28 3.7E-33 238.8 22.1 233 149-389 132-428 (524)
104 3dwl_C Actin-related protein 2 100.0 4.3E-29 1.5E-33 232.4 18.5 235 146-388 7-280 (377)
105 3mmy_A MRNA export factor; mRN 100.0 2E-27 6.8E-32 219.5 29.6 250 134-392 24-307 (368)
106 2w18_A PALB2, fancn, partner a 100.0 1.1E-27 3.8E-32 214.4 25.4 249 111-388 41-356 (356)
107 4gga_A P55CDC, cell division c 100.0 7.7E-27 2.6E-31 220.8 32.3 235 107-349 145-402 (420)
108 4aez_A CDC20, WD repeat-contai 100.0 4.1E-27 1.4E-31 221.3 29.8 237 144-391 85-338 (401)
109 3bg1_A Protein SEC13 homolog; 100.0 1.7E-28 5.7E-33 223.4 19.0 206 145-389 8-247 (316)
110 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-27 4.9E-32 219.7 24.9 253 119-388 48-332 (343)
111 4gq1_A NUP37; propeller, trans 100.0 2.1E-27 7.3E-32 222.7 23.4 226 121-389 103-389 (393)
112 3bws_A Protein LP49; two-domai 100.0 1.7E-25 5.9E-30 211.9 34.7 267 110-389 123-432 (433)
113 4ggc_A P55CDC, cell division c 100.0 1.9E-25 6.6E-30 202.3 32.4 229 107-343 65-316 (318)
114 3jrp_A Fusion protein of prote 100.0 4.2E-26 1.4E-30 211.6 26.7 213 141-390 2-241 (379)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-25 3.7E-30 214.9 30.0 234 150-387 4-337 (450)
116 2j04_A TAU60, YPL007P, hypothe 99.9 1.4E-26 4.9E-31 220.1 20.0 260 108-389 14-297 (588)
117 2aq5_A Coronin-1A; WD40 repeat 99.9 1.2E-25 4.3E-30 211.2 25.9 239 105-345 77-345 (402)
118 3lrv_A PRE-mRNA-splicing facto 99.9 2.9E-26 1E-30 210.9 20.7 223 158-389 44-292 (343)
119 3f3f_A Nucleoporin SEH1; struc 99.9 3.9E-25 1.3E-29 202.0 27.0 214 144-390 5-250 (351)
120 1l0q_A Surface layer protein; 99.9 2.2E-23 7.4E-28 194.8 36.8 274 110-391 32-344 (391)
121 2xyi_A Probable histone-bindin 99.9 5E-25 1.7E-29 209.0 25.5 215 144-389 122-353 (430)
122 2j04_A TAU60, YPL007P, hypothe 99.9 8.7E-27 3E-31 221.6 11.5 222 106-341 49-296 (588)
123 2w18_A PALB2, fancn, partner a 99.9 1.2E-24 4E-29 194.9 22.5 192 118-340 143-355 (356)
124 3jro_A Fusion protein of prote 99.9 2.6E-24 8.7E-29 218.2 24.5 211 143-390 2-239 (753)
125 4gq1_A NUP37; propeller, trans 99.9 5E-24 1.7E-28 199.8 19.4 196 159-391 98-350 (393)
126 3bws_A Protein LP49; two-domai 99.9 6.3E-22 2.2E-26 187.4 30.9 229 107-342 167-432 (433)
127 1nir_A Nitrite reductase; hemo 99.9 7.7E-22 2.6E-26 192.1 30.8 266 116-391 144-460 (543)
128 1nir_A Nitrite reductase; hemo 99.9 1.8E-21 6.2E-26 189.5 30.5 273 111-392 180-517 (543)
129 3u4y_A Uncharacterized protein 99.9 3.1E-20 1.1E-24 169.2 30.5 264 122-391 13-306 (331)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.1E-20 1.1E-24 175.2 27.1 267 111-391 64-389 (415)
131 1pby_B Quinohemoprotein amine 99.9 3E-20 1E-24 169.3 26.2 256 121-392 3-313 (337)
132 2ojh_A Uncharacterized protein 99.9 5E-20 1.7E-24 164.2 26.4 246 125-380 18-293 (297)
133 1ri6_A Putative isomerase YBHE 99.9 3.5E-19 1.2E-23 162.6 29.4 262 124-391 10-312 (343)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.6E-19 1.2E-23 167.9 30.2 227 129-367 159-409 (415)
135 3vgz_A Uncharacterized protein 99.8 1E-17 3.5E-22 153.6 31.3 257 109-379 40-334 (353)
136 2ecf_A Dipeptidyl peptidase IV 99.8 8.3E-19 2.8E-23 177.5 25.1 270 111-388 38-412 (741)
137 2z3z_A Dipeptidyl aminopeptida 99.8 1.2E-18 4E-23 175.5 25.0 270 110-391 82-437 (706)
138 2z3z_A Dipeptidyl aminopeptida 99.8 2.6E-18 8.8E-23 173.0 23.8 269 112-391 28-393 (706)
139 1k32_A Tricorn protease; prote 99.8 4.8E-18 1.6E-22 178.3 25.6 269 106-389 200-502 (1045)
140 3vgz_A Uncharacterized protein 99.8 9.3E-17 3.2E-21 147.2 30.7 234 149-392 39-306 (353)
141 1xfd_A DIP, dipeptidyl aminope 99.8 2.2E-18 7.6E-23 173.8 20.5 268 111-389 18-393 (723)
142 3scy_A Hypothetical bacterial 99.8 4.4E-16 1.5E-20 143.7 33.4 262 126-392 24-342 (361)
143 1ri6_A Putative isomerase YBHE 99.8 8.2E-17 2.8E-21 146.8 27.0 257 108-367 36-334 (343)
144 3hfq_A Uncharacterized protein 99.8 5.2E-16 1.8E-20 142.3 30.9 261 126-392 13-322 (347)
145 2oit_A Nucleoporin 214KDA; NH2 99.8 1.5E-17 5.1E-22 157.5 21.0 192 111-343 38-279 (434)
146 2oit_A Nucleoporin 214KDA; NH2 99.8 1.6E-17 5.6E-22 157.2 18.9 227 129-390 23-279 (434)
147 3o4h_A Acylamino-acid-releasin 99.8 6.3E-17 2.2E-21 159.2 23.7 258 109-389 21-315 (582)
148 1jmx_B Amine dehydrogenase; ox 99.8 4.5E-16 1.5E-20 142.3 27.5 247 122-392 14-328 (349)
149 2ecf_A Dipeptidyl peptidase IV 99.8 9.2E-17 3.1E-21 162.5 24.4 231 150-388 36-366 (741)
150 1k32_A Tricorn protease; prote 99.8 1.7E-16 6E-21 166.4 27.1 234 145-391 198-463 (1045)
151 3hfq_A Uncharacterized protein 99.8 1.6E-15 5.6E-20 139.0 30.0 232 110-341 40-316 (347)
152 1z68_A Fibroblast activation p 99.7 3.5E-17 1.2E-21 165.0 19.0 268 114-388 20-390 (719)
153 1pby_B Quinohemoprotein amine 99.7 2.8E-16 9.5E-21 142.9 20.3 232 112-352 36-320 (337)
154 2ojh_A Uncharacterized protein 99.7 1.3E-15 4.3E-20 135.5 23.5 216 167-391 17-260 (297)
155 3o4h_A Acylamino-acid-releasin 99.7 9.5E-16 3.3E-20 150.8 21.1 224 150-387 21-274 (582)
156 3u4y_A Uncharacterized protein 99.7 1.4E-14 4.8E-19 131.6 26.6 225 157-392 4-255 (331)
157 2oiz_A Aromatic amine dehydrog 99.7 2.6E-14 9.1E-19 131.9 28.2 252 127-390 29-335 (361)
158 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.3E-14 4.4E-19 134.2 25.9 255 129-390 14-342 (365)
159 3pe7_A Oligogalacturonate lyas 99.7 2.3E-14 8E-19 133.2 25.5 263 115-387 41-380 (388)
160 1xfd_A DIP, dipeptidyl aminope 99.7 1.6E-15 5.5E-20 152.9 17.1 226 152-386 18-341 (723)
161 1q7f_A NHL, brain tumor CG1071 99.6 7.1E-13 2.4E-17 117.9 30.0 231 147-390 26-281 (286)
162 3scy_A Hypothetical bacterial 99.6 3.8E-13 1.3E-17 123.9 27.4 252 108-364 48-360 (361)
163 2gop_A Trilobed protease; beta 99.6 1.2E-12 4.2E-17 119.6 29.2 235 128-388 42-330 (347)
164 1z68_A Fibroblast activation p 99.6 6.4E-14 2.2E-18 141.2 22.2 269 111-391 61-445 (719)
165 4a5s_A Dipeptidyl peptidase 4 99.6 5.3E-14 1.8E-18 142.3 20.2 231 152-391 18-355 (740)
166 3c5m_A Oligogalacturonate lyas 99.6 6.1E-13 2.1E-17 123.7 24.9 266 112-390 38-385 (396)
167 1jmx_B Amine dehydrogenase; ox 99.6 4.7E-13 1.6E-17 122.1 22.9 217 155-392 4-287 (349)
168 3fvz_A Peptidyl-glycine alpha- 99.6 7.6E-12 2.6E-16 113.8 30.1 232 150-389 23-322 (329)
169 3dsm_A Uncharacterized protein 99.6 2E-12 6.8E-17 117.7 26.0 256 125-392 13-304 (328)
170 4a5s_A Dipeptidyl peptidase 4 99.6 2.2E-13 7.6E-18 137.8 20.6 271 111-390 18-401 (740)
171 1jof_A Carboxy-CIS,CIS-muconat 99.5 9.3E-13 3.2E-17 121.7 22.0 230 111-343 41-342 (365)
172 2oiz_A Aromatic amine dehydrog 99.5 1.3E-12 4.5E-17 120.5 22.5 245 114-367 54-359 (361)
173 3azo_A Aminopeptidase; POP fam 99.5 1.3E-12 4.3E-17 130.4 24.1 278 106-391 20-371 (662)
174 1qks_A Cytochrome CD1 nitrite 99.5 4.9E-11 1.7E-15 116.0 33.9 257 123-390 171-478 (567)
175 3q7m_A Lipoprotein YFGL, BAMB; 99.5 3.1E-11 1.1E-15 111.8 30.5 265 118-392 52-340 (376)
176 3pe7_A Oligogalacturonate lyas 99.5 7E-12 2.4E-16 116.3 25.5 248 134-392 15-332 (388)
177 3fvz_A Peptidyl-glycine alpha- 99.5 4.9E-11 1.7E-15 108.5 29.8 207 129-341 69-321 (329)
178 1q7f_A NHL, brain tumor CG1071 99.5 7.1E-11 2.4E-15 104.9 29.6 223 111-343 31-281 (286)
179 3dsm_A Uncharacterized protein 99.5 1.9E-11 6.6E-16 111.1 26.3 230 113-351 47-310 (328)
180 2bkl_A Prolyl endopeptidase; m 99.5 3.3E-12 1.1E-16 128.2 22.1 235 148-391 118-399 (695)
181 3q7m_A Lipoprotein YFGL, BAMB; 99.5 4.4E-11 1.5E-15 110.7 27.8 256 116-386 100-375 (376)
182 2xdw_A Prolyl endopeptidase; a 99.5 6.1E-11 2.1E-15 119.3 30.7 236 149-391 123-416 (710)
183 2mad_H Methylamine dehydrogena 99.5 3.7E-10 1.3E-14 104.3 33.3 252 130-392 48-353 (373)
184 2dg1_A DRP35, lactonase; beta 99.5 1.1E-10 3.9E-15 105.9 29.1 255 111-379 7-300 (333)
185 2z2n_A Virginiamycin B lyase; 99.5 2.9E-09 9.9E-14 94.6 37.3 266 111-392 16-298 (299)
186 3no2_A Uncharacterized protein 99.5 4.7E-11 1.6E-15 105.7 25.3 200 119-329 4-230 (276)
187 3sjl_D Methylamine dehydrogena 99.4 2E-10 6.8E-15 105.3 29.5 257 128-392 58-366 (386)
188 3e5z_A Putative gluconolactona 99.4 9.3E-11 3.2E-15 104.7 26.7 222 111-342 29-286 (296)
189 1qks_A Cytochrome CD1 nitrite 99.4 8E-10 2.7E-14 107.5 32.2 277 111-392 198-541 (567)
190 2gop_A Trilobed protease; beta 99.4 1.5E-10 5.2E-15 105.6 25.8 215 110-341 59-330 (347)
191 3no2_A Uncharacterized protein 99.4 1.3E-10 4.5E-15 102.8 24.2 208 161-376 4-230 (276)
192 3c5m_A Oligogalacturonate lyas 99.4 8.2E-12 2.8E-16 116.0 16.8 244 133-391 14-331 (396)
193 1yr2_A Prolyl oligopeptidase; 99.4 1.5E-10 5E-15 117.1 26.3 237 149-391 161-443 (741)
194 3azo_A Aminopeptidase; POP fam 99.4 2E-11 6.9E-16 121.7 19.6 237 145-391 18-327 (662)
195 2dg1_A DRP35, lactonase; beta 99.4 1.5E-09 5.1E-14 98.4 30.2 219 111-332 46-300 (333)
196 1rwi_B Serine/threonine-protei 99.4 2.2E-10 7.4E-15 100.6 23.8 231 152-391 25-266 (270)
197 3e5z_A Putative gluconolactona 99.3 9.7E-10 3.3E-14 98.0 26.8 234 142-392 19-289 (296)
198 2xdw_A Prolyl endopeptidase; a 99.3 5.4E-10 1.8E-14 112.4 26.5 229 111-344 126-416 (710)
199 3c75_H MADH, methylamine dehyd 99.3 2.4E-09 8.1E-14 99.9 28.3 255 129-392 99-405 (426)
200 1rwi_B Serine/threonine-protei 99.3 6.8E-10 2.3E-14 97.4 22.8 226 112-344 26-266 (270)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 3.9E-09 1.3E-13 94.6 27.7 232 147-389 14-299 (314)
202 1kb0_A Quinohemoprotein alcoho 99.3 5.4E-10 1.9E-14 111.4 23.0 264 118-392 76-510 (677)
203 2z2n_A Virginiamycin B lyase; 99.3 4.1E-08 1.4E-12 87.0 33.1 231 146-388 10-254 (299)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-08 4E-13 91.5 28.9 229 111-343 19-300 (314)
205 2bkl_A Prolyl endopeptidase; m 99.2 4.9E-10 1.7E-14 112.4 21.2 232 109-344 120-399 (695)
206 1yiq_A Quinohemoprotein alcoho 99.2 1.7E-09 5.8E-14 108.0 24.3 264 118-392 69-508 (689)
207 2qc5_A Streptogramin B lactona 99.2 1.2E-07 4E-12 84.1 33.7 262 111-388 21-299 (300)
208 1mda_H Methylamine dehydrogena 99.2 2.1E-09 7.1E-14 98.6 22.3 248 130-392 47-349 (368)
209 1xip_A Nucleoporin NUP159; bet 99.2 7.6E-10 2.6E-14 101.9 18.1 167 152-328 39-230 (388)
210 2mad_H Methylamine dehydrogena 99.2 7.6E-08 2.6E-12 88.8 30.5 228 114-348 70-356 (373)
211 1xip_A Nucleoporin NUP159; bet 99.2 1.8E-09 6.3E-14 99.3 19.1 169 194-375 42-230 (388)
212 3iuj_A Prolyl endopeptidase; h 99.2 1.7E-08 5.7E-13 101.2 27.2 236 148-391 126-407 (693)
213 3sjl_D Methylamine dehydrogena 99.1 1.5E-08 5.3E-13 92.8 23.7 236 115-354 83-375 (386)
214 3g4e_A Regucalcin; six bladed 99.1 1.2E-07 4E-12 84.6 28.9 206 113-323 16-250 (297)
215 1kb0_A Quinohemoprotein alcoho 99.1 3.3E-08 1.1E-12 98.5 26.0 268 116-388 125-566 (677)
216 3g4e_A Regucalcin; six bladed 99.1 6.1E-07 2.1E-11 79.9 31.3 223 145-377 7-261 (297)
217 2hz6_A Endoplasmic reticulum t 99.1 6.9E-11 2.4E-15 109.3 5.1 183 118-311 8-201 (369)
218 2qc5_A Streptogramin B lactona 99.1 6.9E-07 2.4E-11 79.0 31.1 228 148-388 17-259 (300)
219 1yiq_A Quinohemoprotein alcoho 99.1 8.9E-08 3.1E-12 95.6 27.1 258 116-378 118-538 (689)
220 3hrp_A Uncharacterized protein 99.1 2.9E-07 9.9E-12 86.0 29.0 230 151-388 131-409 (409)
221 1yr2_A Prolyl oligopeptidase; 99.0 3.1E-08 1.1E-12 100.1 21.6 230 110-344 163-443 (741)
222 3hxj_A Pyrrolo-quinoline quino 99.0 1.3E-08 4.3E-13 92.0 16.2 255 112-389 62-324 (330)
223 2hz6_A Endoplasmic reticulum t 99.0 1.3E-10 4.4E-15 107.4 2.7 184 161-392 8-195 (369)
224 1kv9_A Type II quinohemoprotei 99.0 1E-07 3.5E-12 94.9 23.6 264 118-392 65-491 (668)
225 2iwa_A Glutamine cyclotransfer 99.0 6.5E-07 2.2E-11 77.8 25.8 206 141-389 10-237 (266)
226 3c75_H MADH, methylamine dehyd 98.9 1.9E-07 6.4E-12 87.1 22.8 233 114-349 122-409 (426)
227 2ghs_A AGR_C_1268P; regucalcin 98.9 1.7E-06 5.9E-11 78.1 28.5 202 113-322 52-279 (326)
228 3hrp_A Uncharacterized protein 98.9 8.1E-07 2.8E-11 83.0 27.0 220 111-340 132-408 (409)
229 2ad6_A Methanol dehydrogenase 98.9 5.6E-07 1.9E-11 87.8 26.1 266 118-392 61-497 (571)
230 2ghs_A AGR_C_1268P; regucalcin 98.9 6.7E-06 2.3E-10 74.2 31.2 214 152-379 50-293 (326)
231 3dr2_A Exported gluconolactona 98.9 5.3E-07 1.8E-11 80.6 23.6 212 111-333 46-298 (305)
232 3iuj_A Prolyl endopeptidase; h 98.9 2.7E-07 9.2E-12 92.4 23.8 228 110-344 129-407 (693)
233 3hxj_A Pyrrolo-quinoline quino 98.9 9E-08 3.1E-12 86.3 18.5 212 118-342 106-324 (330)
234 1w6s_A Methanol dehydrogenase 98.9 1.5E-06 5.2E-11 84.8 27.3 190 118-310 61-350 (599)
235 3nol_A Glutamine cyclotransfer 98.8 1.1E-06 3.8E-11 75.5 21.6 184 141-330 32-243 (262)
236 3mbr_X Glutamine cyclotransfer 98.7 8.2E-06 2.8E-10 69.5 24.2 185 140-330 9-222 (243)
237 1kv9_A Type II quinohemoprotei 98.7 6E-06 2E-10 82.1 26.1 236 116-352 114-498 (668)
238 1flg_A Protein (quinoprotein e 98.7 6.7E-06 2.3E-10 80.3 25.7 189 118-311 67-364 (582)
239 2ad6_A Methanol dehydrogenase 98.7 3E-05 1E-09 75.5 29.5 232 117-352 113-504 (571)
240 4a2l_A BT_4663, two-component 98.7 0.0001 3.4E-09 75.0 34.5 269 112-391 175-482 (795)
241 3nok_A Glutaminyl cyclase; bet 98.7 3.3E-06 1.1E-10 72.6 19.5 182 141-329 44-253 (268)
242 3dr2_A Exported gluconolactona 98.7 1.2E-05 4E-10 71.8 24.2 225 145-387 39-304 (305)
243 1mda_H Methylamine dehydrogena 98.6 7.2E-07 2.5E-11 81.7 15.8 230 114-353 69-357 (368)
244 1w6s_A Methanol dehydrogenase 98.6 2E-05 6.7E-10 77.0 26.6 226 122-351 124-512 (599)
245 3nok_A Glutaminyl cyclase; bet 98.6 9.7E-06 3.3E-10 69.7 21.3 189 183-378 44-255 (268)
246 4a2l_A BT_4663, two-component 98.6 0.00013 4.6E-09 74.0 33.6 269 110-390 215-527 (795)
247 2qe8_A Uncharacterized protein 98.6 8.7E-06 3E-10 74.0 22.5 227 110-338 17-317 (343)
248 2qe8_A Uncharacterized protein 98.6 2.6E-06 8.7E-11 77.6 17.8 232 141-380 10-312 (343)
249 1npe_A Nidogen, entactin; glyc 98.5 0.00025 8.4E-09 61.7 28.7 232 129-366 10-261 (267)
250 3nol_A Glutamine cyclotransfer 98.5 5.9E-05 2E-09 64.8 23.4 188 183-377 32-244 (262)
251 3mbr_X Glutamine cyclotransfer 98.5 9.5E-05 3.2E-09 62.9 24.4 189 183-378 10-224 (243)
252 1flg_A Protein (quinoprotein e 98.5 8.9E-05 3.1E-09 72.3 27.3 256 117-377 115-548 (582)
253 3v9f_A Two-component system se 98.5 0.00095 3.3E-08 67.6 34.3 271 110-391 211-526 (781)
254 3v9f_A Two-component system se 98.4 0.00043 1.5E-08 70.1 30.4 270 110-390 163-479 (781)
255 2ece_A 462AA long hypothetical 98.4 0.00022 7.6E-09 66.1 25.1 204 124-330 101-399 (462)
256 2iwa_A Glutamine cyclotransfer 98.4 0.00019 6.6E-09 62.1 23.1 185 112-303 23-238 (266)
257 1fwx_A Nitrous oxide reductase 98.3 0.00019 6.5E-09 68.9 22.4 217 122-342 18-361 (595)
258 2fp8_A Strictosidine synthase; 98.2 0.00064 2.2E-08 60.9 24.5 223 113-341 22-312 (322)
259 2xzh_A Clathrin heavy chain 1; 98.2 0.00089 3E-08 59.0 23.8 213 172-392 49-293 (365)
260 1npe_A Nidogen, entactin; glyc 98.1 0.0031 1E-07 54.6 27.8 216 164-392 3-241 (267)
261 1fwx_A Nitrous oxide reductase 98.1 0.0006 2E-08 65.4 22.9 223 125-350 108-438 (595)
262 2ece_A 462AA long hypothetical 98.1 0.0032 1.1E-07 58.3 26.7 180 160-344 93-354 (462)
263 2xe4_A Oligopeptidase B; hydro 98.1 0.0013 4.4E-08 66.3 25.9 243 148-391 170-460 (751)
264 1bpo_A Protein (clathrin); cla 98.1 0.0021 7.2E-08 58.9 24.2 213 172-392 48-292 (494)
265 2fp8_A Strictosidine synthase; 98.1 0.0013 4.4E-08 58.8 23.0 228 151-389 19-313 (322)
266 3v65_B Low-density lipoprotein 98.0 0.0077 2.6E-07 55.4 31.5 233 112-350 79-326 (386)
267 1k3i_A Galactose oxidase precu 98.0 0.0005 1.7E-08 68.2 20.1 213 130-343 220-498 (656)
268 2xzh_A Clathrin heavy chain 1; 98.0 0.0075 2.6E-07 53.2 32.4 247 127-388 47-331 (365)
269 3v64_C Agrin; beta propeller, 97.9 0.014 4.9E-07 52.8 33.2 233 112-350 36-283 (349)
270 1k3i_A Galactose oxidase precu 97.9 0.00034 1.2E-08 69.4 16.1 229 155-390 190-498 (656)
271 1bpo_A Protein (clathrin); cla 97.7 0.027 9.2E-07 51.7 34.8 248 126-388 45-330 (494)
272 3ei3_A DNA damage-binding prot 97.7 0.025 8.7E-07 59.4 27.1 256 119-389 706-999 (1158)
273 2xn4_A Kelch-like protein 2; s 97.6 0.013 4.6E-07 51.5 20.8 221 163-390 17-277 (302)
274 2p4o_A Hypothetical protein; p 97.6 0.034 1.2E-06 49.0 28.9 215 112-331 34-277 (306)
275 2p4o_A Hypothetical protein; p 97.5 0.039 1.3E-06 48.7 30.4 219 141-364 23-263 (306)
276 2vpj_A Kelch-like protein 12; 97.5 0.012 4.2E-07 51.7 19.5 211 129-343 31-279 (301)
277 2xn4_A Kelch-like protein 2; s 97.5 0.02 6.9E-07 50.4 20.7 210 129-343 30-277 (302)
278 3m0c_C LDL receptor, low-densi 97.5 0.11 3.7E-06 52.4 31.0 223 122-350 397-640 (791)
279 4asc_A Kelch repeat and BTB do 97.5 0.05 1.7E-06 48.2 23.8 216 124-343 10-278 (315)
280 2vpj_A Kelch-like protein 12; 97.5 0.021 7.3E-07 50.1 20.5 222 162-390 15-279 (301)
281 3sov_A LRP-6, low-density lipo 97.5 0.052 1.8E-06 48.3 28.9 219 127-350 11-246 (318)
282 3amr_A 3-phytase; beta-propell 97.5 0.054 1.8E-06 48.5 25.8 187 161-349 39-271 (355)
283 3amr_A 3-phytase; beta-propell 97.5 0.033 1.1E-06 49.9 21.0 182 204-388 44-262 (355)
284 3ii7_A Kelch-like protein 7; p 97.4 0.034 1.2E-06 49.0 21.5 220 164-390 14-273 (306)
285 3v65_B Low-density lipoprotein 97.4 0.07 2.4E-06 48.9 27.1 211 171-391 95-320 (386)
286 1zgk_A Kelch-like ECH-associat 97.4 0.024 8.4E-07 50.0 20.3 223 161-390 24-288 (308)
287 3p5b_L Low density lipoprotein 97.4 0.075 2.6E-06 49.0 30.7 223 122-350 85-328 (400)
288 3qqz_A Putative uncharacterize 97.4 0.049 1.7E-06 46.7 25.3 192 144-339 20-250 (255)
289 3ii7_A Kelch-like protein 7; p 97.4 0.061 2.1E-06 47.3 23.3 212 128-343 23-273 (306)
290 4asc_A Kelch repeat and BTB do 97.3 0.046 1.6E-06 48.4 21.1 175 164-343 7-222 (315)
291 3tc9_A Hypothetical hydrolase; 97.3 0.11 3.9E-06 48.2 27.5 143 113-258 140-301 (430)
292 3v64_C Agrin; beta propeller, 97.3 0.1 3.5E-06 47.1 28.1 224 154-390 37-276 (349)
293 3ei3_A DNA damage-binding prot 97.3 0.27 9.2E-06 51.8 32.5 265 121-391 288-593 (1158)
294 2uvk_A YJHT; unknown function, 97.2 0.074 2.5E-06 47.9 21.6 229 119-349 19-349 (357)
295 1ijq_A LDL receptor, low-densi 97.2 0.11 3.7E-06 46.1 33.0 216 127-350 8-246 (316)
296 1zgk_A Kelch-like ECH-associat 97.2 0.042 1.4E-06 48.5 19.0 211 129-343 39-288 (308)
297 4hw6_A Hypothetical protein, I 97.2 0.15 5.2E-06 47.4 26.4 143 113-258 142-304 (433)
298 1xi4_A Clathrin heavy chain; a 97.1 0.012 4.2E-07 61.7 16.4 213 172-392 48-292 (1630)
299 1xi4_A Clathrin heavy chain; a 97.1 0.082 2.8E-06 55.8 22.3 212 127-348 46-295 (1630)
300 2woz_A Kelch repeat and BTB do 97.1 0.1 3.6E-06 46.1 20.6 210 130-343 25-288 (318)
301 3qhy_B Beta-lactamase inhibito 97.1 0.068 2.3E-06 46.6 18.8 219 151-388 24-245 (282)
302 3ott_A Two-component system se 97.0 0.34 1.2E-05 48.6 28.8 227 110-343 22-261 (758)
303 3m0c_C LDL receptor, low-densi 97.0 0.36 1.2E-05 48.6 29.2 213 170-390 402-633 (791)
304 1ijq_A LDL receptor, low-densi 96.9 0.19 6.4E-06 44.5 30.3 210 172-391 10-240 (316)
305 2woz_A Kelch repeat and BTB do 96.9 0.18 6.1E-06 44.6 20.8 168 173-343 25-232 (318)
306 2xbg_A YCF48-like protein; pho 96.8 0.24 8.1E-06 44.1 25.5 225 111-340 81-320 (327)
307 2p9w_A MAL S 1 allergenic prot 96.8 0.25 8.4E-06 43.8 22.2 188 113-302 16-265 (334)
308 3p5b_L Low density lipoprotein 96.8 0.32 1.1E-05 44.7 29.9 212 172-391 92-322 (400)
309 3sov_A LRP-6, low-density lipo 96.8 0.26 9E-06 43.7 25.7 197 111-311 36-247 (318)
310 2be1_A Serine/threonine-protei 96.7 0.022 7.6E-07 51.0 13.0 100 163-262 11-134 (339)
311 4hw6_A Hypothetical protein, I 96.7 0.37 1.3E-05 44.8 22.3 231 152-388 140-432 (433)
312 2xe4_A Oligopeptidase B; hydro 96.7 0.051 1.7E-06 54.6 16.5 184 196-385 180-394 (751)
313 3tc9_A Hypothetical hydrolase; 96.6 0.47 1.6E-05 44.1 23.5 229 152-388 138-429 (430)
314 1n7d_A LDL receptor, low-densi 96.5 0.0068 2.3E-07 60.4 8.9 221 123-349 380-621 (699)
315 4a0p_A LRP6, LRP-6, low-densit 96.4 0.86 3E-05 44.6 32.8 217 126-349 12-244 (628)
316 3s94_A LRP-6, low-density lipo 96.2 1 3.4E-05 44.0 25.9 216 127-346 16-247 (619)
317 1n7d_A LDL receptor, low-densi 96.2 0.021 7.1E-07 56.9 10.0 212 171-392 385-617 (699)
318 2be1_A Serine/threonine-protei 95.9 0.019 6.7E-07 51.4 7.7 184 120-307 11-236 (339)
319 2d9n_A Cleavage and polyadenyl 95.9 0.0043 1.5E-07 42.3 2.5 32 29-60 4-36 (77)
320 2xbg_A YCF48-like protein; pho 95.9 0.9 3.1E-05 40.3 30.6 264 111-387 37-320 (327)
321 2rhk_C Cleavage and polyadenyl 95.8 0.0032 1.1E-07 42.3 1.7 29 32-60 13-42 (72)
322 3qhy_B Beta-lactamase inhibito 95.8 0.83 2.8E-05 39.6 19.0 221 111-344 25-248 (282)
323 3kya_A Putative phosphatase; s 95.8 1.3 4.5E-05 41.7 28.2 145 112-258 141-341 (496)
324 4a0p_A LRP6, LRP-6, low-densit 95.4 2.2 7.4E-05 41.7 26.8 192 111-308 38-243 (628)
325 2p9w_A MAL S 1 allergenic prot 95.3 1.4 4.8E-05 39.0 23.0 193 149-342 11-265 (334)
326 3ott_A Two-component system se 94.8 3.6 0.00012 41.1 31.7 215 111-339 64-304 (758)
327 2uvk_A YJHT; unknown function, 94.8 2 7E-05 38.2 18.4 136 172-309 168-349 (357)
328 3s94_A LRP-6, low-density lipo 94.3 4.2 0.00014 39.6 31.3 191 112-306 42-247 (619)
329 3kya_A Putative phosphatase; s 94.1 3.9 0.00013 38.5 24.3 232 152-389 140-475 (496)
330 3d2q_A Muscleblind-like protei 94.1 0.012 4.2E-07 39.2 0.7 25 33-57 40-64 (70)
331 3d2n_A Muscleblind-like protei 93.2 0.019 6.5E-07 39.6 0.4 25 33-57 41-65 (83)
332 2e5s_A Otthump00000018578; ZF- 93.2 0.019 6.5E-07 41.0 0.5 25 33-57 54-78 (98)
333 2rpp_A Muscleblind-like protei 93.1 0.019 6.4E-07 40.1 0.3 24 34-57 50-73 (89)
334 3pbp_A Nucleoporin NUP82; beta 92.9 5.6 0.00019 36.5 18.6 134 161-298 31-208 (452)
335 2zwa_A Leucine carboxyl methyl 92.7 8.3 0.00028 38.1 18.8 188 199-391 396-637 (695)
336 3d2n_A Muscleblind-like protei 92.5 0.037 1.3E-06 38.1 1.1 27 32-58 6-34 (83)
337 3pbp_A Nucleoporin NUP82; beta 92.5 6.4 0.00022 36.1 17.5 141 196-338 27-208 (452)
338 3kci_A Probable E3 ubiquitin-p 92.2 6.5 0.00022 35.6 24.9 233 112-344 55-347 (389)
339 2e5s_A Otthump00000018578; ZF- 92.0 0.044 1.5E-06 39.1 1.0 27 32-58 17-45 (98)
340 2rhk_C Cleavage and polyadenyl 91.4 0.072 2.5E-06 35.6 1.5 27 33-59 42-69 (72)
341 3d2q_A Muscleblind-like protei 91.4 0.046 1.6E-06 36.4 0.5 24 34-57 5-30 (70)
342 3mvd_K Regulator of chromosome 91.2 8.8 0.0003 35.1 26.7 190 193-387 76-320 (423)
343 4d9s_A UVB-resistance protein 90.9 9.3 0.00032 34.8 31.3 270 111-387 17-355 (406)
344 4gq2_M Nucleoporin NUP120; bet 90.9 10 0.00035 39.0 17.5 41 151-191 236-276 (950)
345 2d9n_A Cleavage and polyadenyl 90.6 0.12 4.3E-06 35.0 2.1 26 34-59 37-63 (77)
346 3sre_A PON1, serum paraoxonase 90.1 10 0.00034 34.0 18.0 150 232-388 52-251 (355)
347 3qqz_A Putative uncharacterize 89.9 8.4 0.00029 32.7 23.1 184 199-389 36-253 (255)
348 2zwa_A Leucine carboxyl methyl 89.7 16 0.00053 36.1 17.3 183 160-344 396-637 (695)
349 4d9s_A UVB-resistance protein 89.5 12 0.00042 34.0 25.4 232 149-387 14-303 (406)
350 1a12_A RCC1, regulator of chro 89.4 12 0.00042 34.0 27.2 228 111-342 60-365 (413)
351 2ism_A Putative oxidoreductase 89.4 11 0.00038 33.5 24.2 69 112-182 33-115 (352)
352 2cqe_A KIAA1064 protein; CCCH 89.1 0.13 4.6E-06 36.6 1.3 25 32-56 10-35 (98)
353 2rpp_A Muscleblind-like protei 88.9 0.2 6.7E-06 34.9 2.0 27 33-59 15-43 (89)
354 3f7f_A Nucleoporin NUP120; nuc 87.8 7.9 0.00027 38.1 13.1 114 229-343 161-306 (729)
355 3kci_A Probable E3 ubiquitin-p 86.5 18 0.00062 32.6 19.5 154 231-387 54-239 (389)
356 3mvd_K Regulator of chromosome 84.8 23 0.00079 32.3 35.6 261 120-388 34-373 (423)
357 2ism_A Putative oxidoreductase 80.6 30 0.001 30.6 26.5 92 151-245 31-151 (352)
358 1m9o_A Tristetraproline; Cys3H 79.3 1.1 3.7E-05 30.1 2.3 31 29-59 6-38 (77)
359 1tl2_A L10, protein (tachylect 78.1 9.4 0.00032 31.6 7.9 98 152-253 42-158 (236)
360 4fhn_B Nucleoporin NUP120; pro 75.9 10 0.00034 40.0 9.5 40 152-191 239-278 (1139)
361 2cqe_A KIAA1064 protein; CCCH 72.5 1.3 4.5E-05 31.4 1.3 31 29-59 30-62 (98)
362 3f7f_A Nucleoporin NUP120; nuc 66.1 11 0.00039 37.0 6.7 38 152-191 223-260 (729)
363 3of7_A Regulator of chromosome 65.6 85 0.0029 29.0 26.4 189 151-342 148-405 (473)
364 4gq2_M Nucleoporin NUP120; bet 65.1 47 0.0016 34.1 11.5 33 357-392 237-269 (950)
365 4fhn_B Nucleoporin NUP120; pro 61.9 22 0.00074 37.4 8.5 29 282-310 248-276 (1139)
366 1a12_A RCC1, regulator of chro 59.6 1E+02 0.0034 27.8 34.6 231 151-388 59-364 (413)
367 3u1l_A PRE-mRNA-splicing facto 59.4 2.5 8.5E-05 35.5 0.7 25 33-57 68-93 (240)
368 3a9g_A Putative uncharacterize 58.4 97 0.0033 27.3 27.6 70 112-182 31-115 (354)
369 3of7_A Regulator of chromosome 57.3 1.2E+02 0.0041 28.0 27.3 150 193-342 149-341 (473)
370 3q6k_A 43.2 kDa salivary prote 48.6 1.5E+02 0.0052 26.6 12.5 56 294-349 124-197 (381)
371 2d9m_A Zinc finger CCCH-type d 45.8 6.8 0.00023 25.5 0.9 22 36-57 21-43 (69)
372 1tl2_A L10, protein (tachylect 38.9 1.7E+02 0.0056 24.3 14.1 101 195-298 46-159 (236)
373 3s25_A Hypothetical 7-bladed b 36.6 2E+02 0.0069 24.6 23.6 120 211-341 89-215 (302)
374 2g8s_A Glucose/sorbosone dehyd 35.2 2.3E+02 0.0078 24.8 23.5 30 151-180 18-47 (353)
375 8tfv_A Protein (thanatin); bac 32.3 7.8 0.00027 17.7 -0.3 13 37-49 7-21 (21)
376 3no0_A DNA gyrase subunit A; D 30.2 2.5E+02 0.0085 23.7 18.1 153 229-389 67-246 (276)
377 4hvt_A Ritya.17583.B, post-pro 25.5 4.9E+02 0.017 25.5 17.6 56 331-390 318-382 (711)
378 3a9g_A Putative uncharacterize 24.7 3.5E+02 0.012 23.6 28.9 32 150-183 28-59 (354)
379 1bhu_A SMPI, metalloproteinase 24.5 27 0.00091 22.7 1.1 11 42-52 60-70 (102)
380 4a9v_A PHOX; hydrolase, beta-p 23.6 1.9E+02 0.0064 27.7 7.1 39 130-169 510-549 (592)
381 3sre_A PON1, serum paraoxonase 23.6 3.8E+02 0.013 23.6 28.1 130 127-258 81-252 (355)
382 3zwu_A Alkaline phosphatase PH 23.0 1.8E+02 0.0063 27.8 7.1 38 130-168 510-548 (592)
383 4a8x_B HOOK-like, isoform A; t 21.1 31 0.001 19.5 0.7 11 32-42 16-26 (40)
384 1olz_A Semaphorin 4D; developm 20.6 2.6E+02 0.0088 27.2 7.7 55 122-176 418-477 (663)
385 2g8s_A Glucose/sorbosone dehyd 20.3 4.3E+02 0.015 22.9 24.8 69 111-181 19-107 (353)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.3e-41 Score=316.23 Aligned_cols=274 Identities=22% Similarity=0.363 Sum_probs=241.9
Q ss_pred cceeecceEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|..+|+|+.|+++ .+++|+.|++|+|||+.++ +.+.++.+|...|++++|+|++++|++|+.|++|++||+.++
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~-~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC-CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4467889999999986 4668999999999999998 788899999999999999999999999999999999999999
Q ss_pred eEEEEEecCC-ceEEE--EeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEE
Q 016224 183 QCAGVINLGG-EVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWK 255 (393)
Q Consensus 183 ~~~~~~~~~~-~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd 255 (393)
+++..+..+. .+.++ .+++.+++++ .|+.|++||+.++..+ .+.+|...|.++.++++ +|++++.|+.|++||
T Consensus 183 ~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 9888876553 44443 3577777765 8899999999998876 78899999999999987 999999999999999
Q ss_pred eccCCccccCceeecCceeeEEEEEEcC----------------------CEEEEecCCCcEEEeeCCCcceeeEeccCc
Q 016224 256 FNVTTNCFEPAASLKGHSLAVVSLVVGA----------------------NKLYSGSMDNSIRVWNLETLQCIQTLTEHT 313 (393)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~----------------------~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 313 (393)
+.+. +....+..|...|.+++|++ .+|++|+.|+.|++||+++++++.++.+|.
T Consensus 263 ~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 263 VATK----ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp TTTC----CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCC----ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 9876 55667888999999999864 489999999999999999999999999999
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 314 SVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 314 ~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
..|.++.|+ +++|++++.|+.|++||+.+.+.+..+..|.. .|.+++|+|+.+ +|++|+.||+|++|+++
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~~---~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--FVTSLDFHKTAP---YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS--CEEEEEECSSSS---CEEEEETTSEEEEEC--
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC--cEEEEEEcCCCC---EEEEEeCCCcEEEEeCC
Confidence 999999998 67999999999999999998888888776655 499999998776 89999999999999964
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=302.11 Aligned_cols=274 Identities=22% Similarity=0.346 Sum_probs=240.4
Q ss_pred ceeecceEEeeEecC------cEEEecCCCeEEEEECCCCc-EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEE
Q 016224 106 AVIKTDILCRNWVQG------NCMYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~------~~~~g~~dg~i~vwd~~~~~-~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd 178 (393)
..|...|.+++|+++ .+++|+.|++|+||++.++. .....+.+|...|.+++|++++.++++++.|++|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 458889999999863 47789999999999988762 34557899999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCc---eEEEEeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcE
Q 016224 179 CASGQCAGVINLGGE---VGCMISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAI 251 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I 251 (393)
+.+++.+..+..... ...+.+++++++++ .++.|++|++++++.. .+..+...|.+++|+|+ +|++++.|+.|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i 188 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 188 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeE
Confidence 999999888875532 24556788888887 7889999999998876 67788899999999998 99999999999
Q ss_pred EEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEE
Q 016224 252 LAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLL 327 (393)
Q Consensus 252 ~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~ 327 (393)
++||++++ +.+..+.+|...|.+++|+ +.+|++++.|+.|++||+++++++.++.+|...|.+++|+ +.+|+
T Consensus 189 ~iwd~~~~----~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 264 (321)
T 3ow8_A 189 NIFDIATG----KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFV 264 (321)
T ss_dssp EEEETTTT----EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECCCC----cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEE
Confidence 99999876 5567788899999999986 5699999999999999999999999999999999999998 67999
Q ss_pred EEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 328 SCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 328 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+++.|++|+|||+.+.+.+..+..|.. .+.+++|+|++. +|++++.||.|++||++
T Consensus 265 s~s~D~~v~iwd~~~~~~~~~~~~h~~--~v~~v~~s~~g~---~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGTRTCVHTFFDHQD--QVWGVKYNGNGS---KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSS---EEEEEETTCCEEEEECC
T ss_pred EEeCCCcEEEEeCCCCEEEEEEcCCCC--cEEEEEECCCCC---EEEEEeCCCeEEEEeCC
Confidence 999999999999998888777766654 499999988765 89999999999999986
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.2e-38 Score=290.71 Aligned_cols=272 Identities=15% Similarity=0.232 Sum_probs=232.7
Q ss_pred cceeecceEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|..+|.++.|+++ .+++|+.|++|++||+.++ +.+..+..|...|.+++|+|++++|++++.|+.|++|++.+.
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence 3457789999999987 4668999999999999998 788899999999999999999999999999999999999875
Q ss_pred ----eEEEEEecC-CceEEE--EeCCCEEEEEcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEE
Q 016224 183 ----QCAGVINLG-GEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAIL 252 (393)
Q Consensus 183 ----~~~~~~~~~-~~~~~~--~~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~ 252 (393)
+....+..+ ..+.++ .+++.+++++.|+.|++||+.+++.. .+.+|...|.+++|+|+ +|++++.|+.|+
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 344444443 334333 35666666679999999999998877 77889999999999998 999999999999
Q ss_pred EEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEecc--CccceEEEEEc--CCEE
Q 016224 253 AWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTE--HTSVVMSLLCW--DQFL 326 (393)
Q Consensus 253 vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~--~~~l 326 (393)
+||++.. .....+.+|...|.+++++ +++|++++.|++|++||+++++.+..+.. +...|.+++|+ +++|
T Consensus 210 ~wd~~~~----~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 210 LWDVREG----MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp EEETTTC----SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred EEECCCC----eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEE
Confidence 9999876 5567788999999999996 56999999999999999999888877753 33578999998 6799
Q ss_pred EEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 327 LSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 327 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
++|+.|+.|++||+.+...+..+..|.. .|.+++|+|++. +|++|+.|+.|+|||
T Consensus 286 ~~g~~d~~i~vwd~~~~~~~~~~~~h~~--~v~~~~~s~dg~---~l~s~s~D~~i~iWd 340 (340)
T 1got_B 286 LAGYDDFNCNVWDALKADRAGVLAGHDN--RVSCLGVTDDGM---AVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSS---CEEEEETTSCEEEEC
T ss_pred EEECCCCeEEEEEcccCcEeeEeecCCC--cEEEEEEcCCCC---EEEEEcCCccEEecC
Confidence 9999999999999998888777776655 499999988765 899999999999997
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-37 Score=282.10 Aligned_cols=277 Identities=17% Similarity=0.221 Sum_probs=230.2
Q ss_pred cceeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|...|.+++|++++ +++|+.||.|++||+.++ +.+..+..|..+|.+++|+|++++|++|+.|++|++||+.++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 44678899999999874 668999999999999998 888999999999999999999999999999999999999999
Q ss_pred eEEEEEecCC-ceEEE--EeCCCEEEEE-cCCeEEEEECCCCcee--eecCCCCcEEEEEEeCC---EEEEEeCCCcEEE
Q 016224 183 QCAGVINLGG-EVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND---LLFAGTQDGAILA 253 (393)
Q Consensus 183 ~~~~~~~~~~-~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~--~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~v 253 (393)
+.+..+..+. .+.++ .+++.+++++ .|+.|++||++++... .+.+|...|.+++|+|+ +|++++.|+.|++
T Consensus 88 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~i 167 (304)
T 2ynn_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (304)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 9998887654 44444 3677777765 8899999999887543 67899999999999983 8999999999999
Q ss_pred EEeccCCccccCceeecCceeeEEEEEEc----CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEE
Q 016224 254 WKFNVTTNCFEPAASLKGHSLAVVSLVVG----ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLL 327 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~ 327 (393)
||++.... .......|...+..+.+. +.+|++++.|++|++||+++++++.++.+|...|.++.|+ +.+|+
T Consensus 168 wd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 168 WSLGQSTP---NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp EETTCSSC---SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EECCCCCc---cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence 99987632 222233455677777764 4589999999999999999999999999999999999998 56899
Q ss_pred EEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 328 SCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 328 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+++.|++|+|||+.+.+....+..+.. .+.+++++|++. ..++++|+.| .+.+|++.+
T Consensus 245 s~s~Dg~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 245 SGSEDGTLKIWNSSTYKVEKTLNVGLE--RSWCIATHPTGR-KNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSS--SEEEEEECTTCG-GGCEEEEETT-EEEEEECC-
T ss_pred EEcCCCeEEEEECCCCceeeeccCCCc--cEEEEEECCCCC-ceEEEEecCC-ceEEEEecc
Confidence 999999999999998877776655443 488898887643 2257777655 578888765
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.6e-37 Score=282.02 Aligned_cols=276 Identities=21% Similarity=0.285 Sum_probs=230.3
Q ss_pred ceeecceEEeeEecC---cEEEecCCCeEEEEECCCC----cEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEE
Q 016224 106 AVIKTDILCRNWVQG---NCMYGEKCKFLHSWTVGDG----FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~---~~~~g~~dg~i~vwd~~~~----~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd 178 (393)
..|..+|.+++|+++ .+++|+.|++|++|++... ...+..+++|...|.+++|+|++++|++++.|++|++||
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 457889999999864 3678999999999998632 145778999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCC-ceEEEE--eCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--------EEEEEe
Q 016224 179 CASGQCAGVINLGG-EVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--------LLFAGT 246 (393)
Q Consensus 179 ~~~~~~~~~~~~~~-~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--------~l~~~~ 246 (393)
+.+++.+..+..+. .+.++. +++.+++++ .|+.|++||++......+.+|...|.++.+.|. .|++++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~ 173 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe
Confidence 99999998887554 454443 577777765 889999999987777788999999999999874 799999
Q ss_pred CCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--
Q 016224 247 QDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW-- 322 (393)
Q Consensus 247 ~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-- 322 (393)
.|+.|++||++.. +....+.+|...|.+++++ +++|++++.|+.|++||+++++++.++..+ ..|.+++|+
T Consensus 174 ~d~~i~~wd~~~~----~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~ 248 (319)
T 3frx_A 174 NDKMVKAWNLNQF----QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPN 248 (319)
T ss_dssp TTSCEEEEETTTT----EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSS
T ss_pred CCCEEEEEECCcc----hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCC
Confidence 9999999999875 5566788899999999996 569999999999999999999999998754 579999998
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcceEEEEee------cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 323 DQFLLSCSLDKTIKVWFATDSGNLEVTYTH------NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 323 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
+.+|++++ +..+++|++.....+..+..+ .....+.+++|+|++. +|++|+.||.|++||+.+.
T Consensus 249 ~~~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~---~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 249 RYWLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ---TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SSEEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS---EEEEEETTSCEEEEEEEEC
T ss_pred CCEEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC---EEEEeecCceEEEEEEeec
Confidence 45677666 456999999765554444322 1234588999988766 9999999999999999875
No 6
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-37 Score=296.53 Aligned_cols=288 Identities=22% Similarity=0.365 Sum_probs=247.0
Q ss_pred CcccCCCCCCCcccccceeecceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe
Q 016224 90 NNYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS 169 (393)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s 169 (393)
.+|..+............+...|+|+.+....+++|+.||.|++||+.++ +.+..+.+|...|++++| ++++|++|+
T Consensus 114 ~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~--~~~~l~sg~ 190 (435)
T 1p22_A 114 SNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTL-ECKRILTGHTGSVLCLQY--DERVIITGS 190 (435)
T ss_dssp HHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSC-CEEEEECCCSSCEEEEEC--CSSEEEEEE
T ss_pred hhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCC-eEEEEEcCCCCcEEEEEE--CCCEEEEEc
Confidence 57888877777777777788899999998888889999999999999998 888999999999999999 788999999
Q ss_pred CCCcEEEEECCCCeEEEEEecC-CceEEEEeCCCEEEEE-cCCeEEEEECCCCcee----eecCCCCcEEEEEEeCCEEE
Q 016224 170 KDETVRVWDCASGQCAGVINLG-GEVGCMISEGPWIFIG-VTNFVKAWNTQTNTDL----SLSGPVGQVYAMAVGNDLLF 243 (393)
Q Consensus 170 ~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~----~~~~~~~~v~~l~~~~~~l~ 243 (393)
.||+|++||+.+++.+..+..+ ..+.++..++..++++ .|+.|++||+.++... .+.+|...|.++.+++++|+
T Consensus 191 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 270 (435)
T 1p22_A 191 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIV 270 (435)
T ss_dssp TTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEE
Confidence 9999999999999999888755 4566666666666665 8899999999987643 56789999999999888999
Q ss_pred EEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcC
Q 016224 244 AGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWD 323 (393)
Q Consensus 244 ~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 323 (393)
+++.||.|++||+++. +.+..+.+|...|.++.++++++++|+.|+.|++||+++++++.++.+|...|.++.+++
T Consensus 271 s~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 346 (435)
T 1p22_A 271 SASGDRTIKVWNTSTC----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN 346 (435)
T ss_dssp EEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCS
T ss_pred EEeCCCeEEEEECCcC----cEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecC
Confidence 9999999999999887 567778889999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCc---------ceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 324 QFLLSCSLDKTIKVWFATDSG---------NLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 324 ~~l~s~s~dg~i~iwd~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
.+|++|+.||.|++||+.+.. .+..+..|.. .+.++.| ++ .+|++++.||.|++||+.+..
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~--~~---~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG--RVFRLQF--DE---FQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS--CCCCEEE--CS---SCEEECCSSSEEEEEC-----
T ss_pred CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC--CeEEEEe--CC---CEEEEEeCCCEEEEEECCCCC
Confidence 999999999999999997554 4455555544 4777777 33 379999999999999997653
No 7
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-37 Score=280.81 Aligned_cols=283 Identities=22% Similarity=0.281 Sum_probs=218.7
Q ss_pred cceeecceEEeeEecCcEEEecCCCeEEEEECCCC-cEEEEEe-cC-CcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 016224 105 RAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDG-FKLLTQL-EG-HQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~-~~~~~~l-~~-h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~ 181 (393)
...|..+|.++.|+++.+++|+.|++|++||+..+ .+.+..+ .+ |...|.+++|+|++++|++++.|++|+|||+..
T Consensus 10 ~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp EECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred eccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 34577899999999998889999999999999864 3566666 45 999999999999999999999999999999853
Q ss_pred -------CeEEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCCC----cee-eecCCCCcEEEEEEeCC--EEE
Q 016224 182 -------GQCAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTN----TDL-SLSGPVGQVYAMAVGND--LLF 243 (393)
Q Consensus 182 -------~~~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~----~~~-~~~~~~~~v~~l~~~~~--~l~ 243 (393)
.+.+..+..+ ..+.++ .+++++|+++ .|+.|++||+... +.+ .+.+|...|.+++|+|+ +|+
T Consensus 90 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp -----CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred CcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEE
Confidence 3455555543 344443 3578888875 7899999999532 222 67889999999999987 999
Q ss_pred EEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCC----EEEEecCCCcEEEeeCCCc--------ceeeEecc
Q 016224 244 AGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGAN----KLYSGSMDNSIRVWNLETL--------QCIQTLTE 311 (393)
Q Consensus 244 ~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~----~l~sg~~dg~i~iwd~~~~--------~~~~~~~~ 311 (393)
+++.|++|++||..... .+++..+.+|...|.+++|+++ +|++++.|++|++||++++ .+...+..
T Consensus 170 s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 247 (330)
T 2hes_X 170 SSSYDDTVRIWKDYDDD--WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD 247 (330)
T ss_dssp EEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS
T ss_pred EEcCCCeEEEEECCCCC--eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc
Confidence 99999999999987642 1456778899999999999753 7999999999999999765 44555655
Q ss_pred -CccceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcc-eEEEEeecCCc-cEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 312 -HTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGN-LEVTYTHNEEH-GVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 312 -~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
|...|.+++|+ +.+|++++.|+.|+|||..+++. ........+.. .+.+++|+|.. ++++|++++.||+|+||++
T Consensus 248 ~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~-~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 248 VHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELN-GKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp CCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC------CCEEEEETTSEEEEEEC
T ss_pred ccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCC-CceEEEEecCCCcEEEEEe
Confidence 89999999998 56899999999999999876532 11111122333 68999998842 2238999999999999998
Q ss_pred Cce
Q 016224 388 PSV 390 (393)
Q Consensus 388 ~s~ 390 (393)
++.
T Consensus 327 ~~~ 329 (330)
T 2hes_X 327 EKA 329 (330)
T ss_dssp ---
T ss_pred ccC
Confidence 753
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=284.01 Aligned_cols=240 Identities=19% Similarity=0.246 Sum_probs=196.7
Q ss_pred ceeecceEEeeEecCc-EEEecCCCeEEEEECCCCcE---EEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 016224 106 AVIKTDILCRNWVQGN-CMYGEKCKFLHSWTVGDGFK---LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~-~~~g~~dg~i~vwd~~~~~~---~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~ 181 (393)
.+++..|.+++|++++ +++|+.||+|+|||+.++.. ....+.+|...|++|+|+|++++|++|+.|++|++||+++
T Consensus 79 ~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 79 VQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 3456789999999874 66899999999999987721 2234568999999999999999999999999999999999
Q ss_pred CeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEecc
Q 016224 182 GQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNV 258 (393)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~ 258 (393)
++++..+ .+|...|.+++|+++ +|++++.|++|++||+++
T Consensus 159 ~~~~~~~-------------------------------------~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~ 201 (344)
T 4gqb_B 159 QVVLSSY-------------------------------------RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC 201 (344)
T ss_dssp TEEEEEE-------------------------------------CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS
T ss_pred CcEEEEE-------------------------------------cCcCCceEEEEecCCCCCceeeeccccccccccccc
Confidence 8876544 578899999999876 789999999999999988
Q ss_pred CCccccCceee--cCceeeEEEEEEc---CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--C-CEEEEEe
Q 016224 259 TTNCFEPAASL--KGHSLAVVSLVVG---ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--D-QFLLSCS 330 (393)
Q Consensus 259 ~~~~~~~~~~~--~~~~~~v~~l~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~-~~l~s~s 330 (393)
.. ....+ ..+...+.+++++ +++|++|+.|++|++||+++++++.++.+|...|++++|+ + .+|++|+
T Consensus 202 ~~----~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 202 PK----PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp SS----CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE
T ss_pred cc----eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe
Confidence 74 33333 3455668888886 3589999999999999999999999999999999999998 3 4799999
Q ss_pred CCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 331 LDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 331 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
.|++|+|||+.+++. ..+..|. ..|.+++|+|++. .+|++++.|++|++|++++..
T Consensus 278 ~D~~i~vwd~~~~~~-~~~~~H~--~~V~~v~~sp~~~--~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 278 EDCSLAVLDSSLSEL-FRSQAHR--DFVRDATWSPLNH--SLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TTSCEEEECTTCCEE-EEECCCS--SCEEEEEECSSST--TEEEEEETTSCEEEEECCC--
T ss_pred CCCeEEEEECCCCcE-EEEcCCC--CCEEEEEEeCCCC--eEEEEEcCCCeEEEEECCCCC
Confidence 999999999987653 3444444 4599999998754 378899999999999998764
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.6e-36 Score=279.46 Aligned_cols=272 Identities=15% Similarity=0.209 Sum_probs=228.5
Q ss_pred cceeecceEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|..+|+|++|+++ .+++|+.|++|++||..++ +....+..|...|.+++|+|++.+|++++.|+.+++|++...
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~-~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~ 138 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT-NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFD 138 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCC
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC-CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecc
Confidence 4468889999999987 4678999999999999988 777888899999999999999999999999999999998643
Q ss_pred ------eEEEEEe-cCCceEEE--EeCCCEEEE-EcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC----EEEEEeC
Q 016224 183 ------QCAGVIN-LGGEVGCM--ISEGPWIFI-GVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND----LLFAGTQ 247 (393)
Q Consensus 183 ------~~~~~~~-~~~~~~~~--~~~~~~l~~-~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~----~l~~~~~ 247 (393)
.....+. +...+..+ .+++..+++ +.|+.|++||+++++.+ .+.+|...|.++.++++ +|++++.
T Consensus 139 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~ 218 (354)
T 2pbi_B 139 KNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 218 (354)
T ss_dssp TTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEET
T ss_pred ccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeC
Confidence 1223333 33334333 346666655 58999999999999877 78899999999999763 8999999
Q ss_pred CCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccC--ccceEEEEEc-
Q 016224 248 DGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEH--TSVVMSLLCW- 322 (393)
Q Consensus 248 dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~l~~~- 322 (393)
||.|++||++++ +....+..|...|.+++++ +++|++++.|++|++||+++.+.+..+..+ ...+.++.|+
T Consensus 219 Dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 219 DKKAMVWDMRSG----QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp TSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred CCeEEEEECCCC----cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 999999999887 5567788899999999996 569999999999999999998887777643 3467889988
Q ss_pred -CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 323 -DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 323 -~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
+.+|++++.|+.|++||+.++..+..+..|.. .+.+++|+|++. +|++|+.|++|++|+
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~--~v~~l~~spdg~---~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN--RVSTLRVSPDGT---AFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECCCSS--CEEEEEECTTSS---CEEEEETTSEEEEEC
T ss_pred CCCEEEEEECCCcEEEEECCCCceEEEEECCCC--cEEEEEECCCCC---EEEEEcCCCCEEecC
Confidence 78999999999999999988887777766654 599999988766 899999999999996
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.5e-36 Score=274.39 Aligned_cols=273 Identities=20% Similarity=0.385 Sum_probs=229.6
Q ss_pred ceeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe
Q 016224 106 AVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ 183 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~ 183 (393)
..|..+|.+++|++++ +++|+.|+.|++|++.++ +....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc-ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 4577899999999874 668999999999999988 7888999999999999999999999999999999999999999
Q ss_pred EEEEEecCCc-eEEE--EeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEe
Q 016224 184 CAGVINLGGE-VGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKF 256 (393)
Q Consensus 184 ~~~~~~~~~~-~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~ 256 (393)
++..+..+.. +.++ .+++.+++++ .|+.|++||+++++.+ .+..|...|.++.|+++ +|++++.|+.|++||+
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 9988876543 4333 3577777765 7899999999998876 77889999999999987 9999999999999999
Q ss_pred ccCCccccCcee-ecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEE--EEc---CCEEEE
Q 016224 257 NVTTNCFEPAAS-LKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSL--LCW---DQFLLS 328 (393)
Q Consensus 257 ~~~~~~~~~~~~-~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l--~~~---~~~l~s 328 (393)
+... .... ...+...+..++++ +++|++++.|+.|++||+++++++..+.+|......+ .+. +.+|++
T Consensus 179 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 254 (312)
T 4ery_A 179 ASGQ----CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 254 (312)
T ss_dssp TTCC----EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE
T ss_pred CCCc----eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE
Confidence 8763 2333 33456678888876 5699999999999999999999999998887654322 222 679999
Q ss_pred EeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe--CCCeEEEEeCC
Q 016224 329 CSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC--NDNSVRFYDLP 388 (393)
Q Consensus 329 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s--~dg~I~iwd~~ 388 (393)
++.|+.|++||+.+.+.+..+..|.. .+..++|+|+.. +|++++ .|++|++|+..
T Consensus 255 g~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~p~~~---~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 255 GSEDNLVYIWNLQTKEIVQKLQGHTD--VVISTACHPTEN---IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCTTSCEEEEETTTCCEEEEECCCSS--CEEEEEECSSSS---EEEEEECTTTCCEEEEECC
T ss_pred ECCCCEEEEEECCCchhhhhhhccCC--cEEEEeecCcCC---ceEEEEccCCccEEEecCC
Confidence 99999999999998887777766654 589999988766 899887 69999999975
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-36 Score=274.43 Aligned_cols=244 Identities=17% Similarity=0.314 Sum_probs=211.0
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc-eE--EEEeCCCEEEEE-cCCeEEEEE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE-VG--CMISEGPWIFIG-VTNFVKAWN 216 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~~-~~~~i~v~d 216 (393)
+..+++.+|.+.|++++|+|++++|++++.||+|++||+.+++.+..+..+.. +. .+.+++++++++ .|+.|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 45678999999999999999999999999999999999999999988876543 33 345688888776 788999999
Q ss_pred CCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC---CEEEEec
Q 016224 217 TQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGS 290 (393)
Q Consensus 217 ~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~ 290 (393)
+.+++.+ .+.+|...|.+++|+|+ +|++++.|++|++||++... .....+.+|...|.+++|++ .+|++|+
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---ALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT---EEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc---chhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9998877 78899999999999998 99999999999999998763 34566788999999999974 5899999
Q ss_pred CCCcEEEeeCCCcceeeEec-cCccceEEEEEc----CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeee
Q 016224 291 MDNSIRVWNLETLQCIQTLT-EHTSVVMSLLCW----DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMP 365 (393)
Q Consensus 291 ~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 365 (393)
.|++|++||+++.+....+. .|...+..+.+. +.+|++++.|++|++||+++++.+..+..|... +..++|+|
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~--v~~~~~~p 238 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN--VSFAVFHP 238 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCC--EEEEEECC
Confidence 99999999999887766665 456788888886 469999999999999999988888877776554 88999988
Q ss_pred CCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 366 DSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 366 ~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+.+ +|++++.||+|++||+.++++
T Consensus 239 ~~~---~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 239 TLP---IIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp SSS---EEEEEETTSCEEEEETTTCCE
T ss_pred CCC---EEEEEcCCCeEEEEECCCCce
Confidence 766 999999999999999998764
No 12
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.6e-36 Score=286.05 Aligned_cols=289 Identities=26% Similarity=0.396 Sum_probs=239.4
Q ss_pred cccCCCCCCCcccccceeecceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeC
Q 016224 91 NYRAGNSKNSNINNRAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSK 170 (393)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~ 170 (393)
+|..+...+.......+....+.|+.+.++.+++|+.||.|++||+.++ +.+..+.+|...|++++|++++ +|++|+.
T Consensus 104 ~w~~~~~~~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~-~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~ 181 (464)
T 3v7d_B 104 NWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINK-KFLLQLSGHDGGVWALKYAHGG-ILVSGST 181 (464)
T ss_dssp HHHCTTCCCEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECSTT-EEEEEET
T ss_pred hhcCCCcCcceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCC-cEEEEEeCCCcCEEEEEEcCCC-EEEEEeC
Confidence 4554443333333333333346899998888899999999999999998 8999999999999999999988 9999999
Q ss_pred CCcEEEEECCCCeEEEEEecC-CceEEEE----eCCCEEEEE-cCCeEEEEECCCCce----------------------
Q 016224 171 DETVRVWDCASGQCAGVINLG-GEVGCMI----SEGPWIFIG-VTNFVKAWNTQTNTD---------------------- 222 (393)
Q Consensus 171 dg~v~iwd~~~~~~~~~~~~~-~~~~~~~----~~~~~l~~~-~~~~i~v~d~~~~~~---------------------- 222 (393)
||+|++||+++++.+..+..+ ..+.++. +++.+++++ .|+.|++||+.+...
T Consensus 182 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence 999999999999999988754 4454443 255666655 889999999988752
Q ss_pred --eeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEe
Q 016224 223 --LSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVW 298 (393)
Q Consensus 223 --~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iw 298 (393)
..+.+|...|.++..+++++++++.|+.|++||+++. +.+..+.+|...|.+++++ +++|++++.|+.|++|
T Consensus 262 ~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 262 FVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM----KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 337 (464)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred EEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 2567889999999988889999999999999999876 5667788899999999986 5699999999999999
Q ss_pred eCCCcceeeEeccCccceEEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC
Q 016224 299 NLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN 378 (393)
Q Consensus 299 d~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~ 378 (393)
|+++++++.++.+|...|.++.+++++|++++.||.|++||+.+........ + ...+..+++.+++. +|++++
T Consensus 338 d~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~--~~~~~~~~~~~~~~---~l~~~~- 410 (464)
T 3v7d_B 338 DLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH-H--TNLSAITTFYVSDN---ILVSGS- 410 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE-C--TTCCCEEEEEECSS---EEEEEE-
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec-C--CCCccEEEEEeCCC---EEEEec-
Confidence 9999999999999999999999999999999999999999998766543332 2 23455677777665 888888
Q ss_pred CCeEEEEeCCceee
Q 016224 379 DNSVRFYDLPSVII 392 (393)
Q Consensus 379 dg~I~iwd~~s~~l 392 (393)
||.|++||++++++
T Consensus 411 dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 411 ENQFNIYNLRSGKL 424 (464)
T ss_dssp TTEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcE
Confidence 89999999999875
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-36 Score=282.02 Aligned_cols=281 Identities=21% Similarity=0.337 Sum_probs=225.8
Q ss_pred eeecceEEeeEecCc-EEEecCCCeEEEEECCCCcEEEEEecCCcC------------------CEEEEEecCCCCEEEE
Q 016224 107 VIKTDILCRNWVQGN-CMYGEKCKFLHSWTVGDGFKLLTQLEGHQK------------------VVSGITLPSGSDKLYS 167 (393)
Q Consensus 107 ~~~~~i~c~~~~~~~-~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~------------------~I~~i~~s~~~~~l~s 167 (393)
.|...|.|++|++++ .++.+.++.+++|++.++ +.+..+..|.. .|++++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDG-SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTC-CEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCC-CEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 478899999999874 444445889999999998 77777766542 4999999999999999
Q ss_pred EeCCCcEEEEECCCCeEEEEEecCC-ceEEE--EeCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeC-C--
Q 016224 168 GSKDETVRVWDCASGQCAGVINLGG-EVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGN-D-- 240 (393)
Q Consensus 168 ~s~dg~v~iwd~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~-~-- 240 (393)
|+.|++|+|||+.+++.+..+..+. .+.++ .+++.+++++ .|+.|++||+++++......+...+.++++++ +
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK 220 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCC
Confidence 9999999999999999988887554 44444 3577777765 88999999999998775556778899999988 4
Q ss_pred EEEEEeCCCcEEEEEeccCCccccC---ceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCC------------c
Q 016224 241 LLFAGTQDGAILAWKFNVTTNCFEP---AASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLET------------L 303 (393)
Q Consensus 241 ~l~~~~~dg~I~vwd~~~~~~~~~~---~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~------------~ 303 (393)
+|++++.|+.|++||++++...... .....+|...|.+++|+ +.+|++++.|+.|++||+++ +
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~ 300 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 300 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence 9999999999999999876321110 11125788999999996 56999999999999999975 3
Q ss_pred ceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeC---CCCCcEEEEEeC
Q 016224 304 QCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPD---SEGKPVLLCSCN 378 (393)
Q Consensus 304 ~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~l~s~s~ 378 (393)
.+..++.+|...|.+++++ +.+|++++.|+.|++||+.+++.+..+..|.. .+.+++|++. .+++.+|++|+.
T Consensus 301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~--~v~~v~~~~~~~~~p~~~~l~sgs~ 378 (393)
T 1erj_A 301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN--SVISVAVANGSSLGPEYNVFATGSG 378 (393)
T ss_dssp CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECSSCTTCTTCEEEEEEET
T ss_pred cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC--CEEEEEecCCcCcCCCCCEEEEECC
Confidence 4566788999999999998 67999999999999999998888777776654 4889998874 234569999999
Q ss_pred CCeEEEEeCCce
Q 016224 379 DNSVRFYDLPSV 390 (393)
Q Consensus 379 dg~I~iwd~~s~ 390 (393)
||+|+||++...
T Consensus 379 Dg~i~iW~~~~~ 390 (393)
T 1erj_A 379 DCKARIWKYKKI 390 (393)
T ss_dssp TSEEEEEEEEEC
T ss_pred CCcEEECccccc
Confidence 999999998754
No 14
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9.3e-36 Score=282.16 Aligned_cols=289 Identities=20% Similarity=0.310 Sum_probs=237.4
Q ss_pred CCCCCCcccccceee--cceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEe--cCCcCCEEEEEecCCCCEEEEEeC
Q 016224 95 GNSKNSNINNRAVIK--TDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQL--EGHQKVVSGITLPSGSDKLYSGSK 170 (393)
Q Consensus 95 ~~~~~~~~~~~~~~~--~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l--~~h~~~I~~i~~s~~~~~l~s~s~ 170 (393)
.+..|.+........ -...++.|+.+++++.+.|++|+|||+.++ +.+..+ .+|...|++|+|+|++++|++|+.
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~~n~lAvgld~tV~lWd~~tg-~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~ 167 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSG-DILQLLQMEQPGEYISSVAWIKEGNYLAVGTS 167 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTC-CEEEEEECCSTTCCEEEEEECTTSSEEEEEET
T ss_pred cCCCCceEEECCCCcccccceeEEECCCCEEEEEeCCEEEEEECCCC-CEEEEEEecCCCCcEEEEEECCCCCEEEEEEC
Confidence 344444444333222 256789999998888778999999999998 666554 567889999999999999999999
Q ss_pred CCcEEEEECCCCeEEEEEecC-CceEEEEeCCCEEEEE-cCCeEEEEECCCCcee--eecCCCCcEEEEEEeCC--EEEE
Q 016224 171 DETVRVWDCASGQCAGVINLG-GEVGCMISEGPWIFIG-VTNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND--LLFA 244 (393)
Q Consensus 171 dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~--~~~~~~~~v~~l~~~~~--~l~~ 244 (393)
||+|+|||+++++.+..+..+ ..+.++..++.+++++ .++.+++||....... .+.+|...+..+.++++ ++++
T Consensus 168 Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s 247 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS 247 (420)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeee
Confidence 999999999999999988765 4566677788888876 7889999999876544 77899999999999987 9999
Q ss_pred EeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC---CEEEE--ecCCCcEEEeeCCCcceeeEeccCccceEEE
Q 016224 245 GTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYS--GSMDNSIRVWNLETLQCIQTLTEHTSVVMSL 319 (393)
Q Consensus 245 ~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~s--g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l 319 (393)
++.|+.|++|+................|...|.++++.+ +.+++ |+.|++|++||+++++++..+..|. .+.++
T Consensus 248 ~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~ 326 (420)
T 4gga_A 248 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSI 326 (420)
T ss_dssp EETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEE
T ss_pred eeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeee
Confidence 999999999999887655556677888999999999963 45554 5689999999999999999888664 56777
Q ss_pred EEc--CCEEEEEe--CCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 320 LCW--DQFLLSCS--LDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 320 ~~~--~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
.|. ++.+++++ .|+.|+|||+.+++.+..+.+|.. .|.+++|+|++. +|+||+.|++|+|||+.+.
T Consensus 327 ~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~--~V~~l~~spdg~---~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 327 LWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS--RVLSLTMSPDGA---TVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSS---CEEEEETTTEEEEECCSCS
T ss_pred eecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcCCCC---EEEEEecCCeEEEEECCCC
Confidence 776 56666654 799999999999988888877655 599999998766 8999999999999998653
No 15
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.8e-36 Score=274.40 Aligned_cols=277 Identities=18% Similarity=0.215 Sum_probs=228.8
Q ss_pred eeecceEEeeEecC---cEEEecCCCeEEEEECCCC----cEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 016224 107 VIKTDILCRNWVQG---NCMYGEKCKFLHSWTVGDG----FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDC 179 (393)
Q Consensus 107 ~~~~~i~c~~~~~~---~~~~g~~dg~i~vwd~~~~----~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~ 179 (393)
.|...|+|++|+++ .+++|+.|++|+|||+.+. ..+...+.+|...|.+++|+|++++|++++.|+.|++|+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~ 115 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 115 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEee
Confidence 48889999999965 2568999999999998754 2467789999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCceEE---EEeCCCEEEE-EcCCeEEEEECCCCcee--eecCCCCcEEEEEEeCC----EEEEEeCCC
Q 016224 180 ASGQCAGVINLGGEVGC---MISEGPWIFI-GVTNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND----LLFAGTQDG 249 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~---~~~~~~~l~~-~~~~~i~v~d~~~~~~~--~~~~~~~~v~~l~~~~~----~l~~~~~dg 249 (393)
................. ..+.+.++++ +.|+.+++||....... ....|...+..++|+++ ++++++.|+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~ 195 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 195 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC
Confidence 99888777765543322 2245566655 58899999999877655 55678999999999765 789999999
Q ss_pred cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc-CCEE
Q 016224 250 AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW-DQFL 326 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~l 326 (393)
.|++||++.. +....+.+|...|.+++++ +++|++++.|+.|++||+++.+++..+..+ ..+.++.++ +.++
T Consensus 196 ~i~i~d~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~ 270 (340)
T 4aow_A 196 LVKVWNLANC----KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYW 270 (340)
T ss_dssp CEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSE
T ss_pred EEEEEECCCC----ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCce
Confidence 9999999886 5567788899999999986 569999999999999999999999888754 578999998 4578
Q ss_pred EEEeCCCcEEEEEcCCCcceEEEEe-------ecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 327 LSCSLDKTIKVWFATDSGNLEVTYT-------HNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 327 ~s~s~dg~i~iwd~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
++++.|+.|++||++....+..+.. ..+...|.+++|+|++. +|++|+.||.|+|||+.+|+
T Consensus 271 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~---~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 271 LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ---TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS---EEEEEETTSCEEEEEEEC--
T ss_pred eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC---EEEEEeCCCEEEEEeCCCcC
Confidence 8888999999999987655444332 23445699999988766 99999999999999999985
No 16
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2e-37 Score=289.78 Aligned_cols=280 Identities=15% Similarity=0.232 Sum_probs=227.5
Q ss_pred cceeecceEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|..+|+|++|+++ .+++|+.|++|+|||+.++ +.+..+..|...|.+++|+|++++|++|+.|+.|++||+.+.
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~-~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS-QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 3457889999999987 4778999999999999998 888999999999999999999999999999999999998753
Q ss_pred e-------EEEEEecC-CceEE--EEeC-CC-EEEEEcCCeEEEEECCCCceee-e-----cCCCCcEEEEEEeC---CE
Q 016224 183 Q-------CAGVINLG-GEVGC--MISE-GP-WIFIGVTNFVKAWNTQTNTDLS-L-----SGPVGQVYAMAVGN---DL 241 (393)
Q Consensus 183 ~-------~~~~~~~~-~~~~~--~~~~-~~-~l~~~~~~~i~v~d~~~~~~~~-~-----~~~~~~v~~l~~~~---~~ 241 (393)
. ....+..+ ..+.. +.++ +. ++.++.|+.|++||+.+++.+. + .+|...|.++.+++ ++
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 220 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM 220 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE
Confidence 2 11222222 22222 2232 33 4445589999999999988763 3 57889999999965 39
Q ss_pred EEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCcc-----
Q 016224 242 LFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTS----- 314 (393)
Q Consensus 242 l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~----- 314 (393)
|++|+.|+.|++||++... .....+.+|...|.+++|+ +++|++++.|++|++||+++++++..+..+..
T Consensus 221 l~sgs~D~~v~~wd~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 221 FISGSCDTTVRLWDLRITS---RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp EEEEETTSCEEEEETTTTC---CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred EEEEECCCeEEEEECCCCC---cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccc
Confidence 9999999999999998543 5567788999999999996 56999999999999999999999888865432
Q ss_pred --ceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEe--ecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 315 --VVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYT--HNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 315 --~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
.|.+++|+ +++|++|+.||.|++||+...+.+..+.. ..+...|.+++|+|++. +|++|+.|++|++|++.
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~---~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS---ALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS---EEEEECTTSCEEEEECC
T ss_pred cCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC---EEEEeeCCCCEEEEecC
Confidence 47889997 78999999999999999988776655522 22345688999988766 99999999999999998
Q ss_pred cee
Q 016224 389 SVI 391 (393)
Q Consensus 389 s~~ 391 (393)
..+
T Consensus 375 ~~~ 377 (380)
T 3iz6_a 375 GHR 377 (380)
T ss_dssp SSS
T ss_pred CCc
Confidence 753
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.5e-37 Score=283.81 Aligned_cols=277 Identities=18% Similarity=0.197 Sum_probs=213.5
Q ss_pred ceeecceEEeeEecCc--EEEecC------CCeEEEEECCCCc---EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcE
Q 016224 106 AVIKTDILCRNWVQGN--CMYGEK------CKFLHSWTVGDGF---KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETV 174 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~--~~~g~~------dg~i~vwd~~~~~---~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v 174 (393)
..|+..|.|++|++++ +++|+. |+.|++|+..++. .......+|...|++++|+|++. +++++.||+|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 4577899999999985 445665 7889999987652 12334456999999999999975 5678889999
Q ss_pred EEEECCCCeEEEEE-----ecCCceEEE--EeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC---EE
Q 016224 175 RVWDCASGQCAGVI-----NLGGEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND---LL 242 (393)
Q Consensus 175 ~iwd~~~~~~~~~~-----~~~~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~---~l 242 (393)
+|||+.+++..... .+...+.++ .+++++|+++ .|+.|++||+.+++.+ .+..|...|.+++|+++ ++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 99999988654322 233455544 4688888875 8899999999999877 77889999999999876 79
Q ss_pred EEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc---CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEE
Q 016224 243 FAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG---ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSL 319 (393)
Q Consensus 243 ~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l 319 (393)
++++.|+.|++||++++.. ........|...+.+++|+ +.+|++|+.|+.|++||+++++++.++.+|...|+++
T Consensus 198 ~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp EEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred eeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence 9999999999999988643 2223345577789999986 3589999999999999999999999999999999999
Q ss_pred EEc--C-CEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 320 LCW--D-QFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 320 ~~~--~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
+|+ + ++|++++.|++|+|||+++++.+. ...| ...|.+++|+|. ++.+|++++.||+|++|++++.
T Consensus 276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~-~~~H--~~~V~~vafsP~--d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCTVAVLDADFSEVFR-DLSH--RDFVTGVAWSPL--DHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTSCEEEE-ECCC--SSCEEEEEECSS--STTEEEEEETTSCEEEEECC--
T ss_pred EEcCCCCCEEEEEeCCCEEEEEECCCCcEeE-ECCC--CCCEEEEEEeCC--CCCEEEEEcCCCeEEEEECCCC
Confidence 998 3 579999999999999998765543 3344 446999999984 2238999999999999999753
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1e-35 Score=283.87 Aligned_cols=289 Identities=27% Similarity=0.430 Sum_probs=246.8
Q ss_pred CcccCCCCCCCcccccceeec-ceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE
Q 016224 90 NNYRAGNSKNSNINNRAVIKT-DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG 168 (393)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~-~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~ 168 (393)
.+|..+...+. .....|.. .+.|+.+..+.+++|+.||.|++||+.++ +.+..+.+|...|++++|+ +++|++|
T Consensus 101 ~~w~~~~~~~~--~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~ 175 (445)
T 2ovr_B 101 TNWRRGELKSP--KVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTG-KCLRTLVGHTGGVWSSQMR--DNIIISG 175 (445)
T ss_dssp HHHHHSCCCCC--EEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTC-CEEEECCCCSSCEEEEEEE--TTEEEEE
T ss_pred hcccCCCccee--EEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCC-cEEEEEcCCCCCEEEEEec--CCEEEEE
Confidence 35665543222 12233444 46899998888899999999999999998 8899999999999999997 5699999
Q ss_pred eCCCcEEEEECCCCeEEEEEecC-CceEEEEeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCCEEEEE
Q 016224 169 SKDETVRVWDCASGQCAGVINLG-GEVGCMISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAG 245 (393)
Q Consensus 169 s~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~ 245 (393)
+.||+|++||+.+++.+..+..+ ..+.++..++..++++ .|+.|++||+.+++.+ .+..|...|.++.+++++++++
T Consensus 176 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 255 (445)
T 2ovr_B 176 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 255 (445)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEE
T ss_pred eCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEE
Confidence 99999999999999999888755 4566666666666655 8899999999998877 7788999999999988899999
Q ss_pred eCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCE
Q 016224 246 TQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQF 325 (393)
Q Consensus 246 ~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~ 325 (393)
+.||.|++||+++. +....+.+|...|.++.+++.++++++.|+.|++||+++++++.++.+|...+.++.+++++
T Consensus 256 ~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 331 (445)
T 2ovr_B 256 AYDFMVKVWDPETE----TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI 331 (445)
T ss_dssp ETTSCEEEEEGGGT----EEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTE
T ss_pred cCCCEEEEEECCCC----cEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCE
Confidence 99999999999886 56677888999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcceEEEEeec-CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 326 LLSCSLDKTIKVWFATDSGNLEVTYTHN-EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 326 l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
|++++.||.|++||+++++.+..+..+. +...+.++.|. + .+|++++.||.|++||+.++++
T Consensus 332 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~---~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 332 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--K---NFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--S---SEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--C---CEEEEEeCCCeEEEEECCCCce
Confidence 9999999999999999888777766522 34568888874 2 3899999999999999998764
No 19
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=265.70 Aligned_cols=272 Identities=19% Similarity=0.311 Sum_probs=226.7
Q ss_pred eEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEe--cCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 112 ILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQL--EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 112 i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l--~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
..|++|+++++++.+.|++|+|||+.++ ++++.+ .+|...|++++|+|++++|++|+.||+|++||+++++++..+.
T Consensus 28 ~~~l~WS~~~~lAvg~D~tV~iWd~~tg-~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVALDNSVYLWSASSG-DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETTTC-CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEECCCCEEEEEeCCEEEEEECCCC-CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 5789999999888888999999999998 666655 4688899999999999999999999999999999999999887
Q ss_pred cCC-ceEEEEeCCCEEEEE-cCCeEEEEECCCCcee--eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccc
Q 016224 190 LGG-EVGCMISEGPWIFIG-VTNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCF 263 (393)
Q Consensus 190 ~~~-~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~--~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~ 263 (393)
.+. .+.++...+.+++++ .++.+++|+....... .+.+|...+..+.+.++ +|++++.|+.|++||++++....
T Consensus 107 ~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 186 (318)
T 4ggc_A 107 SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW 186 (318)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBS
T ss_pred CccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccc
Confidence 664 455566677787776 7789999998876544 67889999999999887 99999999999999999876555
Q ss_pred cCceeecCceeeEEEEEEcC---CE--EEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEE--eCCCc
Q 016224 264 EPAASLKGHSLAVVSLVVGA---NK--LYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSC--SLDKT 334 (393)
Q Consensus 264 ~~~~~~~~~~~~v~~l~~~~---~~--l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~--s~dg~ 334 (393)
........+...|.++.+.+ +. +++++.++.|++||.+......... +...+..+.+. +..++++ +.|+.
T Consensus 187 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~ 265 (318)
T 4ggc_A 187 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQ 265 (318)
T ss_dssp CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCE
Confidence 55666777888898888853 33 4577889999999999887766554 56677778777 5565554 47999
Q ss_pred EEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 335 IKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 335 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
|+|||+++++.+..+..|.. .|.+++|+|++. +|+|++.||+|+|||+.+.
T Consensus 266 i~iwd~~~~~~~~~l~gH~~--~V~~l~~spdg~---~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 266 LVIWKYPTMAKVAELKGHTS--RVLSLTMSPDGA---TVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEETTTCCEEEEECCCSS--CEEEEEECTTSS---CEEEEETTTEEEEECCSCC
T ss_pred EEEEECCCCcEEEEEcCCCC--CEEEEEEcCCCC---EEEEEecCCeEEEEECCCC
Confidence 99999999988888877655 599999998766 8999999999999999764
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=273.15 Aligned_cols=279 Identities=19% Similarity=0.267 Sum_probs=220.4
Q ss_pred eec-ceEEeeEecCc--EEEecCCCeEEEEECCCCcEEE---EEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 016224 108 IKT-DILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLL---TQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (393)
Q Consensus 108 ~~~-~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~---~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~ 181 (393)
|.. .|.+++|++++ +++|+.|++|+|||+.++ +.. ....+|...|++++|+|++++|++|+.|++|+|||+.+
T Consensus 14 h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 14 HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD-SWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp STTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT-EEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC-cceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 444 89999999874 668999999999999877 322 23378999999999999999999999999999999987
Q ss_pred Ce--EEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCCCce----eeecCCCCcEEEEEEeCC--EEEEEeCCC
Q 016224 182 GQ--CAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTD----LSLSGPVGQVYAMAVGND--LLFAGTQDG 249 (393)
Q Consensus 182 ~~--~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~----~~~~~~~~~v~~l~~~~~--~l~~~~~dg 249 (393)
+. ++..+..+ ..+.++ .+++.+|+++ .|+.|++||+..+.. ..+..|...|.+++|+|+ +|++++.|+
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 64 45566544 345444 3678888775 889999999987643 257789999999999998 999999999
Q ss_pred cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCC---------------cceeeEecc-
Q 016224 250 AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLET---------------LQCIQTLTE- 311 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~---------------~~~~~~~~~- 311 (393)
.|++||++.... .....+.+|...|.+++|+ +++|++++.|++|++||... .+++.++.+
T Consensus 173 ~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T 3fm0_A 173 TVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF 250 (345)
T ss_dssp CEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSS
T ss_pred cEEEEEecCCCE--EEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCC
Confidence 999999987532 3446788999999999996 56999999999999999632 133445554
Q ss_pred CccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcc----eEEEEe---ecCCccEEEEEeeeCCCCCcEEEEEeCCCeE
Q 016224 312 HTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGN----LEVTYT---HNEEHGVLALCGMPDSEGKPVLLCSCNDNSV 382 (393)
Q Consensus 312 ~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~----~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I 382 (393)
|...|.+++|+ +..|++++.|+.|++|+...... ...+.. ..+...|.+++|+|+.+ .+|++++.||+|
T Consensus 251 h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~--~~laS~s~Dg~v 328 (345)
T 3fm0_A 251 HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP--GLLASCSDDGEV 328 (345)
T ss_dssp CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST--TEEEEEETTSCE
T ss_pred CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc--eEEEEcCCCCcE
Confidence 88899999998 67899999999999999865421 111111 13345699999998753 389999999999
Q ss_pred EEEeCCcee
Q 016224 383 RFYDLPSVI 391 (393)
Q Consensus 383 ~iwd~~s~~ 391 (393)
++|++.+.+
T Consensus 329 ~~W~~~~~~ 337 (345)
T 3fm0_A 329 AFWKYQRPE 337 (345)
T ss_dssp EEEEECC--
T ss_pred EEEEecCCC
Confidence 999998765
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-35 Score=272.70 Aligned_cols=278 Identities=15% Similarity=0.180 Sum_probs=220.0
Q ss_pred cceeecceEEeeE-----ec-C--cEEEecCCCeEEEEECCCC------cEEEEEecCCcCCEEEEEecCCCCEEEEEeC
Q 016224 105 RAVIKTDILCRNW-----VQ-G--NCMYGEKCKFLHSWTVGDG------FKLLTQLEGHQKVVSGITLPSGSDKLYSGSK 170 (393)
Q Consensus 105 ~~~~~~~i~c~~~-----~~-~--~~~~g~~dg~i~vwd~~~~------~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~ 170 (393)
...|...|+|+.| ++ + .+++|+.|++|++||+.++ ......+.+|...|.+++|+|++.+|++++.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 3457789999999 43 3 4678999999999998743 1567789999999999999999999999999
Q ss_pred CCcEEEEECCCCeEEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCCCceeeec---CCCCcEEEEEEeCC---
Q 016224 171 DETVRVWDCASGQCAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDLSLS---GPVGQVYAMAVGND--- 240 (393)
Q Consensus 171 dg~v~iwd~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~---~~~~~v~~l~~~~~--- 240 (393)
|++|++||+.+++.+..+..+ ..+.++ .+++.+++++ .|+.|++||+......... .|...|.+++|+|+
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 176 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKS 176 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCS
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccccc
Confidence 999999999999998888754 445444 3678777765 8899999999865544333 78889999999874
Q ss_pred ---------EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCC-cceeeE
Q 016224 241 ---------LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLET-LQCIQT 308 (393)
Q Consensus 241 ---------~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~-~~~~~~ 308 (393)
+|++++.|+.|++||... .....+.+|...|.+++|+ +++|++|+.|+.|++||+.+ ......
T Consensus 177 ~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~ 251 (343)
T 2xzm_R 177 ANKVQPFAPYFASVGWDGRLKVWNTNF-----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQRE 251 (343)
T ss_dssp CSCCCSSCCEEEEEETTSEEEEEETTT-----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEE
T ss_pred ccccCCCCCEEEEEcCCCEEEEEcCCC-----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccccee
Confidence 699999999999999432 4456778899999999996 56999999999999999954 444444
Q ss_pred eccCccceEEEEEcC-CEEEEEeCCCcEEEEEcCCCcceE--EEEee---------cCCccEEEEEeeeCCCCCcEEEEE
Q 016224 309 LTEHTSVVMSLLCWD-QFLLSCSLDKTIKVWFATDSGNLE--VTYTH---------NEEHGVLALCGMPDSEGKPVLLCS 376 (393)
Q Consensus 309 ~~~~~~~v~~l~~~~-~~l~s~s~dg~i~iwd~~~~~~~~--~~~~~---------~~~~~v~~~~~~~~~~~~~~l~s~ 376 (393)
+. +...|.+++|++ ..+++++.|+.|++||+.+..... .+... .+...+.+++|+|++. +|++|
T Consensus 252 ~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~---~l~sg 327 (343)
T 2xzm_R 252 FD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK---KLFAG 327 (343)
T ss_dssp EE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC---CEEEE
T ss_pred ec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC---eEEEe
Confidence 43 456799999983 234456678899999998765543 22211 2334589999998876 89999
Q ss_pred eCCCeEEEEeCCcee
Q 016224 377 CNDNSVRFYDLPSVI 391 (393)
Q Consensus 377 s~dg~I~iwd~~s~~ 391 (393)
+.||.|++|++++++
T Consensus 328 ~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 328 FTDGVIRTFSFETSA 342 (343)
T ss_dssp ETTSEEEEEEEEEEE
T ss_pred cCCceEEEEEEEccC
Confidence 999999999998874
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-35 Score=291.02 Aligned_cols=281 Identities=17% Similarity=0.204 Sum_probs=222.1
Q ss_pred cceeecceEEeeEecCc---EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 016224 105 RAVIKTDILCRNWVQGN---CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~---~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~ 181 (393)
...|...|.+++|+++. +++|+.|++|++||..++ +.+.++.+|...|++++|+|++++|++++.|++|++||+.+
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~ 221 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 221 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 34577899999999873 678999999999999887 88899999999999999999999999999999999999999
Q ss_pred CeEEEEEe--------cCCceEEE--EeCCCEEEEE-cCCeEEEEECCCCcee---------------------------
Q 016224 182 GQCAGVIN--------LGGEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL--------------------------- 223 (393)
Q Consensus 182 ~~~~~~~~--------~~~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~--------------------------- 223 (393)
++.+..+. +...+..+ .+++++|+++ .|++|++||+.+++..
T Consensus 222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 301 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 301 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE
T ss_pred CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe
Confidence 99888873 33445444 3678887765 8899999999876543
Q ss_pred -----------------eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccC-------c-----------
Q 016224 224 -----------------SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEP-------A----------- 266 (393)
Q Consensus 224 -----------------~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~-------~----------- 266 (393)
.+.+|...|.+++|+|+ +|++++.|+.|++||+.++...... +
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l 381 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 381 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE
T ss_pred CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcE
Confidence 23478899999999998 9999999999999998754211000 0
Q ss_pred --------------------------eeec----------------------------------CceeeEEEEEEc--CC
Q 016224 267 --------------------------ASLK----------------------------------GHSLAVVSLVVG--AN 284 (393)
Q Consensus 267 --------------------------~~~~----------------------------------~~~~~v~~l~~~--~~ 284 (393)
..+. .|...+.+++++ ++
T Consensus 382 ~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~ 461 (611)
T 1nr0_A 382 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ 461 (611)
T ss_dssp EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC
T ss_pred EEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC
Confidence 0000 012335566665 67
Q ss_pred EEEEecCCCcEEEeeCCCcce--eeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEE-EeecCCccEE
Q 016224 285 KLYSGSMDNSIRVWNLETLQC--IQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVT-YTHNEEHGVL 359 (393)
Q Consensus 285 ~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~ 359 (393)
+|++|+.|++|++||+.+++. +.. ..|...|.+++|+ +++|++++.|++|++||+.+...+... ....+...|.
T Consensus 462 ~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~ 540 (611)
T 1nr0_A 462 FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 540 (611)
T ss_dssp EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccccee
Confidence 999999999999999987643 344 6799999999998 679999999999999999763322211 1111345699
Q ss_pred EEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 360 ALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 360 ~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
+++|+|++. +|++++.|++|++|++.++
T Consensus 541 ~v~fspdg~---~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 541 CVSWSPDNV---RLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp EEEECTTSS---EEEEEETTSCEEEEETTCT
T ss_pred EEEECCCCC---EEEEEECCCcEEEEECCCc
Confidence 999998766 9999999999999999865
No 23
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-34 Score=275.25 Aligned_cols=275 Identities=25% Similarity=0.426 Sum_probs=242.8
Q ss_pred cceeecceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeE
Q 016224 105 RAVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC 184 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 184 (393)
...|...|.++.|+++.+++|+.||.|++||+.++ +.+..+.+|...|.+++|+ +++|++++.||+|++||+.+++.
T Consensus 155 ~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~ 231 (445)
T 2ovr_B 155 LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC 231 (445)
T ss_dssp CCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE
T ss_pred EcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcC-cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE
Confidence 34577899999999888999999999999999998 8999999999999999996 56899999999999999999999
Q ss_pred EEEEecC-CceEEEEeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCc
Q 016224 185 AGVINLG-GEVGCMISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTN 261 (393)
Q Consensus 185 ~~~~~~~-~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~ 261 (393)
+..+..+ ..+.++..++.+++++ .|+.|++||+++++.+ .+..|...|.++.+++..+++++.|+.|++||++++
T Consensus 232 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~-- 309 (445)
T 2ovr_B 232 LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-- 309 (445)
T ss_dssp EEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTC--
T ss_pred EEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCC--
Confidence 8888754 4566666677766665 7899999999998877 777899999999997779999999999999999887
Q ss_pred cccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEecc---CccceEEEEEcCCEEEEEeCCCcEEEE
Q 016224 262 CFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTE---HTSVVMSLLCWDQFLLSCSLDKTIKVW 338 (393)
Q Consensus 262 ~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~l~~~~~~l~s~s~dg~i~iw 338 (393)
+....+.+|...+.++.+++++|++++.||.|++||+++++++..+.. |...|.++.+++++|++++.||.|++|
T Consensus 310 --~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 310 --NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 387 (445)
T ss_dssp --CEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred --CEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEE
Confidence 556778889999999999999999999999999999999999999986 888999999999999999999999999
Q ss_pred EcCCCcceEEEEe---ecCCccEEEEEeeeCCCCCcEEEEEeCCCe----EEEEeCCc
Q 016224 339 FATDSGNLEVTYT---HNEEHGVLALCGMPDSEGKPVLLCSCNDNS----VRFYDLPS 389 (393)
Q Consensus 339 d~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~----I~iwd~~s 389 (393)
|+.+++.+..+.. ......+.+++|+|+.. +|++++.||+ |.+||+..
T Consensus 388 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 388 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL---VCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE---EEEEECSSSSSCCEEEEEECCC
T ss_pred ECCCCceeeeeeccccCCCCceEEEEEecCCEE---EEEEcccCCCCccEEEEEECCC
Confidence 9998887766632 23445699999987655 9999999998 99999874
No 24
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-34 Score=270.91 Aligned_cols=273 Identities=20% Similarity=0.285 Sum_probs=228.0
Q ss_pred ceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecC-CcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEG-HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 111 ~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~-h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
.+.++.|+++.+++++.|+.|++||+.++ +....+.. |...|++++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 95 ~~~~~~~s~~~l~~~~~d~~v~lw~~~~~-~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 95 YLNLLDWSNLNVVAVALERNVYVWNADSG-SVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp TCBCEEECTTSEEEEEETTEEEEEETTTC-CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred eEEEEeecCCCEEEEECCCeEEEeeCCCC-cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 56778899999999999999999999998 56555554 89999999999999999999999999999999999988886
Q ss_pred cC-CceEEEEeCCCEEEEE-cCCeEEEEECCCC-cee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccc
Q 016224 190 LG-GEVGCMISEGPWIFIG-VTNFVKAWNTQTN-TDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCF 263 (393)
Q Consensus 190 ~~-~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~-~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~ 263 (393)
.+ ..+.++..++.+++++ .++.|++||++.. ... .+..|...|.+++|+++ +|++++.|+.|++||++..
T Consensus 174 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~---- 249 (401)
T 4aez_A 174 GHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS---- 249 (401)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS----
T ss_pred CCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC----
Confidence 54 4566666677777765 8899999999843 333 78889999999999988 9999999999999999876
Q ss_pred cCceeecCceeeEEEEEEcC---CEEEEec--CCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEE--eCCCc
Q 016224 264 EPAASLKGHSLAVVSLVVGA---NKLYSGS--MDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSC--SLDKT 334 (393)
Q Consensus 264 ~~~~~~~~~~~~v~~l~~~~---~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~--s~dg~ 334 (393)
.+...+..|...|.+++|++ .++++++ .|+.|++||+++++++..+. +...+.++.|+ +.+|+++ +.|+.
T Consensus 250 ~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 250 IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCE
T ss_pred CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCc
Confidence 55667778999999999974 4677765 79999999999999998886 56789999998 6788884 48999
Q ss_pred EEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 335 IKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 335 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
|++||+.+...........+...+..++|+|++. +|++++.||.|++|++.+++.
T Consensus 329 i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~---~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 329 LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR---ILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS---EEEEECTTSEEEEEECCC---
T ss_pred EEEEecCCccceeEEEecCCCCCEEEEEECCCCC---EEEEEeCCCcEEEEECCCCcc
Confidence 9999998765555443334455688999988766 999999999999999998764
No 25
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2e-35 Score=277.02 Aligned_cols=282 Identities=15% Similarity=0.135 Sum_probs=234.9
Q ss_pred ceeecceEEeeEecCcEEEecCCCeEEEEECCCCc-----EEEEEecCCcCCEEEEEecCC----C---CEEEEEeCCCc
Q 016224 106 AVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGF-----KLLTQLEGHQKVVSGITLPSG----S---DKLYSGSKDET 173 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~-----~~~~~l~~h~~~I~~i~~s~~----~---~~l~s~s~dg~ 173 (393)
..|..+|+|++|++..+++|+.||.|++||+.++. +.+..+.+|...|++++|+|+ + ++|++++.||.
T Consensus 13 ~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~ 92 (397)
T 1sq9_A 13 KAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGD 92 (397)
T ss_dssp SCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred hhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence 35778999999999888899999999999999872 267888899999999999999 9 99999999999
Q ss_pred EEEEECCCCeE-----EEEEecC------CceEE--EE----eCCCE-EEEE-cCCeEEEEECCC------Ccee-----
Q 016224 174 VRVWDCASGQC-----AGVINLG------GEVGC--MI----SEGPW-IFIG-VTNFVKAWNTQT------NTDL----- 223 (393)
Q Consensus 174 v~iwd~~~~~~-----~~~~~~~------~~~~~--~~----~~~~~-l~~~-~~~~i~v~d~~~------~~~~----- 223 (393)
|++||+.+++. ...+... ..+.+ +. +++.+ ++++ .++.|++||+.+ ++.+
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 172 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPT 172 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCE
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCc
Confidence 99999998876 6777655 44543 44 56777 7665 889999999988 4432
Q ss_pred -ee-------cCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCCccccCceeecC---c---eeeEEEEEEc--CCEE
Q 016224 224 -SL-------SGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKG---H---SLAVVSLVVG--ANKL 286 (393)
Q Consensus 224 -~~-------~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~---~---~~~v~~l~~~--~~~l 286 (393)
.+ ..|...|.+++|+++ +|++++.|+.|++||++.. +.+..+.. | ...|.+++++ +++|
T Consensus 173 ~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l 248 (397)
T 1sq9_A 173 LELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTL----RPLYNFESQHSMINNSNSIRSVKFSPQGSLL 248 (397)
T ss_dssp EEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTT----EEEEEEECCC---CCCCCEEEEEECSSTTEE
T ss_pred ceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCC----ceeEEEeccccccccCCccceEEECCCCCEE
Confidence 33 457889999999988 9999999999999999876 55666777 8 8899999996 6699
Q ss_pred EEecCC---CcEEEeeCCCcceeeEecc-------------CccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEE
Q 016224 287 YSGSMD---NSIRVWNLETLQCIQTLTE-------------HTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEV 348 (393)
Q Consensus 287 ~sg~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~ 348 (393)
++++.| +.|++||+++++.+..+.. |...|.++.|+ +++|++++.|+.|++||+.+.+.+..
T Consensus 249 ~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 249 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT 328 (397)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEE
Confidence 999999 9999999999999999998 99999999998 67999999999999999998887777
Q ss_pred EE------ee-------------cCCccEEEEEeeeCCC-------CCcEEEEEeCCCeEEEEeCCcee
Q 016224 349 TY------TH-------------NEEHGVLALCGMPDSE-------GKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 349 ~~------~~-------------~~~~~v~~~~~~~~~~-------~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+. .+ .+...+.+++|+|++. +.++|++++.||.|++|++.+++
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 329 LNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred EecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 76 43 0045699999999851 11389999999999999998874
No 26
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-34 Score=265.61 Aligned_cols=277 Identities=13% Similarity=0.190 Sum_probs=238.1
Q ss_pred cceeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|..+|+|++|++++ +++|+.|+.|++||+.++ +.+..+.+|...|++++|+|++++|++++.||.|++||+.++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG-ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 34577899999999874 567999999999999998 888999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCceEEEE--eCCCEEEEE-cC-----CeEEEEECCCCce------------eeecCCCC--cEEEEEEeCC
Q 016224 183 QCAGVINLGGEVGCMI--SEGPWIFIG-VT-----NFVKAWNTQTNTD------------LSLSGPVG--QVYAMAVGND 240 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~~--~~~~~l~~~-~~-----~~i~v~d~~~~~~------------~~~~~~~~--~v~~l~~~~~ 240 (393)
+.+..+.....+..+. +++.+++++ .+ +.|.+||+..... ..+..+.. .+.+++|+++
T Consensus 107 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 107 QCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp CEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred cEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 9999998777766554 578888876 55 8999999876642 23444555 8999999987
Q ss_pred --EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccce
Q 016224 241 --LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVV 316 (393)
Q Consensus 241 --~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v 316 (393)
+|++++.||.|++||++... .....+..|...|.+++++ +++|++++.|+.|++||+++++.+..+. +...+
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~ 262 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPL 262 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTTT---EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCE
T ss_pred CCEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCc
Confidence 99999999999999998742 5567778899999999996 5689999999999999999999998887 77889
Q ss_pred EEEEEc--CCEEEEEeCCC--------------cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCC
Q 016224 317 MSLLCW--DQFLLSCSLDK--------------TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDN 380 (393)
Q Consensus 317 ~~l~~~--~~~l~s~s~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg 380 (393)
..+.++ ++++++++.++ .+++||+.+.+.+..+..|.. .+.+++|+|++. +|++++.||
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~---~l~s~~~dg 337 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG--PLNTVAISPQGT---SYASGGEDG 337 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSS---EEEEEETTS
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC--cEEEEEECCCCC---EEEEEcCCC
Confidence 999998 67999999888 899999998888877776654 499999988765 999999999
Q ss_pred eEEEEeCCcee
Q 016224 381 SVRFYDLPSVI 391 (393)
Q Consensus 381 ~I~iwd~~s~~ 391 (393)
.|++|+++++.
T Consensus 338 ~v~iw~~~~~~ 348 (369)
T 3zwl_B 338 FIRLHHFEKSY 348 (369)
T ss_dssp EEEEEEECHHH
T ss_pred eEEEEECcccc
Confidence 99999998753
No 27
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.4e-34 Score=264.76 Aligned_cols=244 Identities=20% Similarity=0.313 Sum_probs=210.9
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc-eEE--EEeCCCEEEEE-cCCeEEEEE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE-VGC--MISEGPWIFIG-VTNFVKAWN 216 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~-~~~--~~~~~~~l~~~-~~~~i~v~d 216 (393)
+...++.+|...|++++|+|++++|++++.||+|+|||+.+++.+..+..+.. +.+ +.+++.+++++ .|+.|++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 56788999999999999999999999999999999999999998888876544 333 34678888875 889999999
Q ss_pred CCCCc----e-eeecCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEE
Q 016224 217 TQTNT----D-LSLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYS 288 (393)
Q Consensus 217 ~~~~~----~-~~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s 288 (393)
+.+.. . ..+.+|...|.++.|+++ .+++++.|+.|++||+.++ +....+.+|...|.+++++ +.+|++
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG----QQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCC----cEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 98753 1 267789999999999887 8999999999999999886 5567788999999999996 458999
Q ss_pred ecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeC
Q 016224 289 GSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPD 366 (393)
Q Consensus 289 g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 366 (393)
|+.|+.|++||+++++++.++.+|...|.+++|+ +++|++++.|++|++||+++.+.+..+........+.+++|+|+
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 9999999999999999999999999999999998 67999999999999999988766555443333346899999887
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 367 SEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 367 ~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+. +|++|+.||.|++||+.+++
T Consensus 282 g~---~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 282 GR---LLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp SS---EEEEEETTSEEEEEETTTCC
T ss_pred CC---EEEEECCCCeEEEEEcccCc
Confidence 66 99999999999999998764
No 28
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-35 Score=274.76 Aligned_cols=279 Identities=13% Similarity=0.114 Sum_probs=225.7
Q ss_pred eeecceEEeeEec----C--cEEEecCCCeEEEEECCCCcEEEEEecC-----CcCCEEEEEecCC----CCEEEEEeCC
Q 016224 107 VIKTDILCRNWVQ----G--NCMYGEKCKFLHSWTVGDGFKLLTQLEG-----HQKVVSGITLPSG----SDKLYSGSKD 171 (393)
Q Consensus 107 ~~~~~i~c~~~~~----~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~-----h~~~I~~i~~s~~----~~~l~s~s~d 171 (393)
.|..+|+|++|++ + .+++++.++.|++||+.++ +.+..+.. |...|++++|+|+ +++|++++.|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ-GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG-GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC-cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 4778999999996 2 3667888889999999876 44444443 6688999999998 6799999999
Q ss_pred CcEEEEECCCCeEEEEEec-CCceEEEE--e-CCCEEEEE-cCCeEEEEECCCCcee-ee---cCCCCcEEEEEEeCC--
Q 016224 172 ETVRVWDCASGQCAGVINL-GGEVGCMI--S-EGPWIFIG-VTNFVKAWNTQTNTDL-SL---SGPVGQVYAMAVGND-- 240 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~-~~~~~~~~--~-~~~~l~~~-~~~~i~v~d~~~~~~~-~~---~~~~~~v~~l~~~~~-- 240 (393)
|.|++||+.+++.+..+.. ...+.++. + ++.+++++ .|+.|++||+++++.. .+ ..|...|.+++|+++
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 174 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE 174 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC
Confidence 9999999999999988874 45555544 4 67777775 7899999999998877 33 589999999999987
Q ss_pred EEEEEeCCCcEEEEEeccCCcccc------------------------CceeecCceeeEEEEEEcCCEEEEecCCCcEE
Q 016224 241 LLFAGTQDGAILAWKFNVTTNCFE------------------------PAASLKGHSLAVVSLVVGANKLYSGSMDNSIR 296 (393)
Q Consensus 241 ~l~~~~~dg~I~vwd~~~~~~~~~------------------------~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~ 296 (393)
+|++++.||.|++||++....... .......|...|.++++++++|++++.|+.|+
T Consensus 175 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~ 254 (366)
T 3k26_A 175 KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIV 254 (366)
T ss_dssp EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEE
T ss_pred EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEE
Confidence 999999999999999986532100 11222348889999999999999999999999
Q ss_pred EeeCCCcce--------------eeEeccCccceEEEEEc----CCEEEEEeCCCcEEEEEcCCCcce----EEEEeecC
Q 016224 297 VWNLETLQC--------------IQTLTEHTSVVMSLLCW----DQFLLSCSLDKTIKVWFATDSGNL----EVTYTHNE 354 (393)
Q Consensus 297 iwd~~~~~~--------------~~~~~~~~~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~ 354 (393)
+||+++++. +..+..|...|.+++|+ +++|++++.||.|++||+.+++.. ..+..+..
T Consensus 255 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 334 (366)
T 3k26_A 255 CWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC 334 (366)
T ss_dssp EEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTC
T ss_pred EEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccccc
Confidence 999987654 77888898888888776 679999999999999999877543 24444443
Q ss_pred CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 355 EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 355 ~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
...+.+++|+|++. +|++++.||.|++||+.+
T Consensus 335 ~~~v~~~~~s~~~~---~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 335 GAAIRQTSFSRDSS---ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CSCEEEEEECTTSS---EEEEEETTSEEEEEEC--
T ss_pred CCceEEEEeCCCCC---eEEEEeCCCEEEEEEecC
Confidence 56799999998766 999999999999999864
No 29
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-34 Score=270.47 Aligned_cols=272 Identities=16% Similarity=0.253 Sum_probs=232.8
Q ss_pred eecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEE
Q 016224 108 IKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCA 185 (393)
Q Consensus 108 ~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 185 (393)
|...|+|++|++++ +++|+.|+.|++|| .++ +.+..+.+|...|++++|+|++++|++++.|+.|++||+.+++.+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTG-ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTS-CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCC-CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 56799999999773 66799999999999 455 788899999999999999999999999999999999999999998
Q ss_pred EEEecCCc----------------e--EEEEeCCCEEEEEcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEE
Q 016224 186 GVINLGGE----------------V--GCMISEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFA 244 (393)
Q Consensus 186 ~~~~~~~~----------------~--~~~~~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~ 244 (393)
..+..... + ..+.+++.+++++.++.|++||+.+++.. .+..|...|.+++|+++ +|++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE
Confidence 88875543 2 22345666666668999999999998776 67789999999999987 8999
Q ss_pred EeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCC-EEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc-
Q 016224 245 GTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGAN-KLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW- 322 (393)
Q Consensus 245 ~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~- 322 (393)
++.|+.|++||++.. +....+..|...|.++.++++ +|++++.|+.|++||+++++.+..+..|...+.++.|+
T Consensus 265 ~~~d~~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNG----NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp EETTSCEEEECSSSB----SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT
T ss_pred EcCCCEEEEEECCCC----ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC
Confidence 999999999999876 556777889999999999754 99999999999999999999999999999999999998
Q ss_pred -CCEEEEEeCCCcEEEEEcCCCc--------------------ceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCe
Q 016224 323 -DQFLLSCSLDKTIKVWFATDSG--------------------NLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNS 381 (393)
Q Consensus 323 -~~~l~s~s~dg~i~iwd~~~~~--------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~ 381 (393)
+++|++++.|+.|++||+.+.. .+..+..+.....+..++|+|++. +|++++.||.
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~dg~ 417 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN---KISVAYSLQE 417 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS---EEEEEESSSC
T ss_pred CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc---eEEEEecCce
Confidence 6799999999999999998766 444444443322699999988766 9999999999
Q ss_pred EEEEeCC
Q 016224 382 VRFYDLP 388 (393)
Q Consensus 382 I~iwd~~ 388 (393)
|++|+++
T Consensus 418 i~iw~~~ 424 (425)
T 1r5m_A 418 GSVVAIP 424 (425)
T ss_dssp CEEEECC
T ss_pred EEEEeec
Confidence 9999986
No 30
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-34 Score=273.18 Aligned_cols=241 Identities=23% Similarity=0.333 Sum_probs=212.1
Q ss_pred EEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCC-ceEEEE--eCCCEEEEE-cCCeEEEEECC
Q 016224 143 LTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGG-EVGCMI--SEGPWIFIG-VTNFVKAWNTQ 218 (393)
Q Consensus 143 ~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~--~~~~~l~~~-~~~~i~v~d~~ 218 (393)
...+.+|..+|++++|+|++++|++|+.||+|+|||+.+++....+..+. .+.++. +++.+++++ .|+.|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999999999999999999999999999999988887654 454443 577777765 88999999999
Q ss_pred CCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCC
Q 016224 219 TNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDN 293 (393)
Q Consensus 219 ~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg 293 (393)
+.+.+ .+.+|...|.+++|+|+ +|++++.|+.|++||++++ ..+..+.+|...|.++.++ +.+|++++.|+
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~----~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG----YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC----cEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 98876 77889999999999987 9999999999999999887 5567788999999999986 56899999999
Q ss_pred cEEEeeCCCcceeeEeccCccceEEEEEcC----------------------CEEEEEeCCCcEEEEEcCCCcceEEEEe
Q 016224 294 SIRVWNLETLQCIQTLTEHTSVVMSLLCWD----------------------QFLLSCSLDKTIKVWFATDSGNLEVTYT 351 (393)
Q Consensus 294 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~----------------------~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 351 (393)
+|++||++++++...+..|...|.++.|++ .+|++|+.|+.|++||++++..+..+..
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 999999999999999999999999999973 4899999999999999998888777776
Q ss_pred ecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 352 HNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 352 ~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
|.. .+.+++|+|++. +|++++.|+.|++||+.++++
T Consensus 337 h~~--~v~~v~~~~~g~---~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 337 HDN--WVRGVLFHSGGK---FILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CSS--CEEEEEECSSSS---CEEEEETTTEEEEECCTTSCC
T ss_pred CCC--cEEEEEEcCCCC---EEEEEeCCCeEEEEECCCCce
Confidence 654 588999988765 899999999999999987653
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.8e-34 Score=288.12 Aligned_cols=276 Identities=18% Similarity=0.257 Sum_probs=224.6
Q ss_pred ceeecceEEeeEecC---cEEEecCCCeEEEEECCCC----cEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEE
Q 016224 106 AVIKTDILCRNWVQG---NCMYGEKCKFLHSWTVGDG----FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~---~~~~g~~dg~i~vwd~~~~----~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd 178 (393)
..|...|+|++|+++ .+++|+.|++|++|++.+. ......+.+|...|++++|+|++++|+||+.||+|+|||
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 357889999999864 3678999999999998753 145678999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecC-CceEEEE--eCCCEEEE-EcCCeEEEEECCCCceeee----cCCCCcEEEEEEeCC----EEEEEe
Q 016224 179 CASGQCAGVINLG-GEVGCMI--SEGPWIFI-GVTNFVKAWNTQTNTDLSL----SGPVGQVYAMAVGND----LLFAGT 246 (393)
Q Consensus 179 ~~~~~~~~~~~~~-~~~~~~~--~~~~~l~~-~~~~~i~v~d~~~~~~~~~----~~~~~~v~~l~~~~~----~l~~~~ 246 (393)
+.+++.+..+..+ ..+.++. +++.++++ +.|+.|++||........+ .+|...|.+++|+++ .|++++
T Consensus 459 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 459 LAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred CCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe
Confidence 9999998888755 4454443 56766665 5889999999877655433 468889999999986 799999
Q ss_pred CCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcC-
Q 016224 247 QDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWD- 323 (393)
Q Consensus 247 ~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~- 323 (393)
.|+.|++||++.. +....+.+|...|.+++++ +++|++++.|+.|++||+++++.+..+.. ...+.+++|++
T Consensus 539 ~d~~v~vwd~~~~----~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~ 613 (694)
T 3dm0_A 539 WDKTVKVWNLSNC----KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPN 613 (694)
T ss_dssp TTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSS
T ss_pred CCCeEEEEECCCC----cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCC
Confidence 9999999999876 5567788999999999996 56999999999999999999999888864 45799999983
Q ss_pred CEEEEEeCCCcEEEEEcCCCcceEEEEeec-----------------CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 324 QFLLSCSLDKTIKVWFATDSGNLEVTYTHN-----------------EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 324 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
..+++++.|+.|+|||+++...+..+..+. ....+.+++|+|++. +|++|+.||.|+||+
T Consensus 614 ~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~---~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 614 RYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS---TLFSGYTDGVIRVWG 690 (694)
T ss_dssp SSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS---EEEEEETTSEEEEEE
T ss_pred CcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC---EEEEEcCCCeEEEEe
Confidence 344555567789999998877665543211 112367889988766 999999999999999
Q ss_pred CCc
Q 016224 387 LPS 389 (393)
Q Consensus 387 ~~s 389 (393)
+..
T Consensus 691 i~~ 693 (694)
T 3dm0_A 691 IGR 693 (694)
T ss_dssp C--
T ss_pred ccC
Confidence 864
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.3e-34 Score=263.43 Aligned_cols=244 Identities=20% Similarity=0.284 Sum_probs=210.1
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc---eEEEEeCCCEEEEE-cCCeEEEEE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE---VGCMISEGPWIFIG-VTNFVKAWN 216 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~-~~~~i~v~d 216 (393)
+...++++|...|++++|+|++++|+||+.||+|+|||..+++....+..+.. ...+.+++..++++ .|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 56778999999999999999999999999999999999999988887776533 23445788888887 788999999
Q ss_pred CCCCc-------eeeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc----C
Q 016224 217 TQTNT-------DLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG----A 283 (393)
Q Consensus 217 ~~~~~-------~~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~ 283 (393)
+.... ...+..|...|.++.|+++ .|++++.|++|++||++++ +.+..+.+|...|.++++. +
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG----QLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECCCSSC
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC----eEEEEEcCCCCCeEEEEEEeCCCC
Confidence 86542 2356789999999999987 8999999999999999887 5677888999999988874 4
Q ss_pred CEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEE
Q 016224 284 NKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLAL 361 (393)
Q Consensus 284 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 361 (393)
++|++|+.|+.|++||+++++++..+..|...|.+++|+ +.+|++++.|++|++||++....+..+..+.....+.++
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence 699999999999999999999999999999999999997 679999999999999999887666555444444568889
Q ss_pred EeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 362 CGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 362 ~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+|+|++. +|++++.|+.|++||+.+++
T Consensus 291 ~~s~~g~---~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 291 DFSLSGR---LLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp EECTTSS---EEEEEETTSCEEEEETTTCS
T ss_pred EEeCCCC---EEEEEECCCcEEEEECCCCc
Confidence 9988766 99999999999999998764
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.9e-34 Score=283.82 Aligned_cols=278 Identities=19% Similarity=0.229 Sum_probs=224.9
Q ss_pred cccceeecceEEeeEecCc--EEEecCCCeEEEEECCCC-cEEEEEecCCcCCEEEEEecCCCCEEEEEeCC----CcEE
Q 016224 103 NNRAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD----ETVR 175 (393)
Q Consensus 103 ~~~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d----g~v~ 175 (393)
.....|...|+|++|++++ +++|+.|++|+|||+.++ .....++.+|...|.+++|+|++++|++++.+ ++|+
T Consensus 53 ~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~ 132 (611)
T 1nr0_A 53 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF 132 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEE
T ss_pred eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEE
Confidence 3445688899999999874 567999999999998643 24566889999999999999999999999875 4788
Q ss_pred EEECCCCeEEEEEecCC-ceEEE--EeCCC-EEEE-EcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeC
Q 016224 176 VWDCASGQCAGVINLGG-EVGCM--ISEGP-WIFI-GVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQ 247 (393)
Q Consensus 176 iwd~~~~~~~~~~~~~~-~~~~~--~~~~~-~l~~-~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~ 247 (393)
+||. ++....+..+. .+.++ .+++. .+++ +.|+.|++||..+++.. .+.+|...|.+++|+|+ +|++++.
T Consensus 133 ~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 133 LFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp ETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 8874 55555554443 34433 34554 3554 58899999999887766 78899999999999998 9999999
Q ss_pred CCcEEEEEeccCCccccCceee-------cCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEecc---Cccc
Q 016224 248 DGAILAWKFNVTTNCFEPAASL-------KGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTE---HTSV 315 (393)
Q Consensus 248 dg~I~vwd~~~~~~~~~~~~~~-------~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~---~~~~ 315 (393)
|++|++||+.++. ....+ .+|...|.+++|+ +++|++++.|++|++||+++++++.++.. +...
T Consensus 211 D~~i~lwd~~~g~----~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 211 DGTIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp TSCEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred CCcEEEEECCCCc----EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccce
Confidence 9999999988763 23333 2799999999996 56999999999999999999999888864 3445
Q ss_pred eEEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 316 VMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 316 v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+..+.+.++.+++++.|+.|++||...+.....+..|.. .+.+++|+|++. +|++++.|++|++||+.+++
T Consensus 287 ~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~--~v~~l~~spdg~---~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 287 QLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK--AITALSSSADGK---TLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp EEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSS---EEEEEETTSCEEEEETTTCC
T ss_pred eEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC--CEEEEEEeCCCC---EEEEEeCCCcEEEEECCCCc
Confidence 677888899999999999999999987765555555544 599999988765 99999999999999998764
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.9e-34 Score=268.16 Aligned_cols=275 Identities=13% Similarity=0.149 Sum_probs=217.5
Q ss_pred ceeecceEEeeEecCc---EEEecCCCeEEEEECCCCcEEEEEec--CCcCCEEEEEecC-CCCEEEEEeCCCcEEEEEC
Q 016224 106 AVIKTDILCRNWVQGN---CMYGEKCKFLHSWTVGDGFKLLTQLE--GHQKVVSGITLPS-GSDKLYSGSKDETVRVWDC 179 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~---~~~g~~dg~i~vwd~~~~~~~~~~l~--~h~~~I~~i~~s~-~~~~l~s~s~dg~v~iwd~ 179 (393)
..|...|.|++|++++ +++|+.|+.|++||+.++ +....+. +|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ-NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST-TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc-ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 4567799999999875 668999999999999977 4444444 7999999999999 7899999999999999999
Q ss_pred CCCeEEEEEecC----CceEE--EEeCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeCCC
Q 016224 180 ASGQCAGVINLG----GEVGC--MISEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDG 249 (393)
Q Consensus 180 ~~~~~~~~~~~~----~~~~~--~~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~dg 249 (393)
.+ +.+..+... ..+.+ +.+++.+++++ .++.|++||+.......+..|...|.+++|+++ +|++++.|+
T Consensus 149 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 149 SG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp TS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTS
T ss_pred CC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCC
Confidence 86 444444332 22333 44678888876 788999999966555688899999999999987 899999999
Q ss_pred cEEEEEeccCCccccCceeecCceeeEEEEEEcC---CEEEEecCCCcEEEeeCCCcceeeEeccCc-------------
Q 016224 250 AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGSMDNSIRVWNLETLQCIQTLTEHT------------- 313 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~------------- 313 (393)
.|++||++...........+ +|...|.+++|++ ++|++++.|+.|++||+++++.+..+..|.
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKAT 306 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCE
T ss_pred EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEe
Confidence 99999999854322344444 6889999999865 699999999999999999988887776553
Q ss_pred ----cceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 314 ----SVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 314 ----~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
..+..+.++ +++ +++.|+.|+|||+.+++.+..+..+.....+..++|+|++. +|++++ |+.|++||+
T Consensus 307 ~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~---~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 307 WHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGD---VLASGM-GFNILIWNR 380 (383)
T ss_dssp ECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSS---EEEEEE-TTEEEEEEC
T ss_pred ccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCcc---EEEEec-CCcEEEEec
Confidence 223334444 333 77789999999999888877777654444566678888765 899997 999999999
Q ss_pred Cc
Q 016224 388 PS 389 (393)
Q Consensus 388 ~s 389 (393)
++
T Consensus 381 ~~ 382 (383)
T 3ei3_B 381 ED 382 (383)
T ss_dssp C-
T ss_pred CC
Confidence 75
No 35
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=253.39 Aligned_cols=274 Identities=18% Similarity=0.212 Sum_probs=226.7
Q ss_pred cceeecceEEeeEecC-cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC-
Q 016224 105 RAVIKTDILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG- 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~- 182 (393)
...|...|.|++|.++ .+++|+.||.|++||+.++ +....+..|...|.+++|+|++++|++++.||.|++|++...
T Consensus 14 l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 14 LKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQ-WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS 92 (313)
T ss_dssp ECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSS-EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred hhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCC-EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence 3457789999999555 4667999999999999887 888889999999999999999999999999999999998764
Q ss_pred --eEEEEEec-CCceEEEEeCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeC-C--EEEEEeCCCcEEEEE
Q 016224 183 --QCAGVINL-GGEVGCMISEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGN-D--LLFAGTQDGAILAWK 255 (393)
Q Consensus 183 --~~~~~~~~-~~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~-~--~l~~~~~dg~I~vwd 255 (393)
+.+..+.. ...+.++..++.+++++ .++.|++|| .......+..|...+.++.+.+ + .|++++.|+.|++||
T Consensus 93 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 93 GEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ 171 (313)
T ss_dssp TSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe
Confidence 44555543 34566666667777765 888999999 3333347788999999999976 3 999999999999999
Q ss_pred eccCCccccCceeecC-ceeeEEEEEEc-CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcC-CEEEEEeCC
Q 016224 256 FNVTTNCFEPAASLKG-HSLAVVSLVVG-ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWD-QFLLSCSLD 332 (393)
Q Consensus 256 ~~~~~~~~~~~~~~~~-~~~~v~~l~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~l~s~s~d 332 (393)
.. .....+.. |...+.+++++ ...+++++.|+.|++||+++++++..+..|...|.+++|++ ..|++++.|
T Consensus 172 ~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d 245 (313)
T 3odt_A 172 ND------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGED 245 (313)
T ss_dssp TT------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETT
T ss_pred cC------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecC
Confidence 33 33445555 88889999886 33599999999999999999999999999999999999993 379999999
Q ss_pred CcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 333 KTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 333 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+.|++||+.+++....+..+.. .+.+++|+|++. +++++.||.|++||+.++++
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~~--~i~~~~~~~~~~----~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPAI--SIWSVDCMSNGD----IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSSS--CEEEEEECTTSC----EEEEETTSCEEEEESCGGGC
T ss_pred CEEEEEECCCCceeEEEeccCc--eEEEEEEccCCC----EEEEeCCCcEEEEeCCCCce
Confidence 9999999998887777766543 589999988765 66799999999999998754
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-34 Score=275.21 Aligned_cols=281 Identities=14% Similarity=0.145 Sum_probs=212.3
Q ss_pred ceeecceEEeeEecC---cEEEecCCCeEEEEECCCCc-EEEEEecCCcCCEEEEEecC-CCCEEEEEeCCCcEEEEECC
Q 016224 106 AVIKTDILCRNWVQG---NCMYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~---~~~~g~~dg~i~vwd~~~~~-~~~~~l~~h~~~I~~i~~s~-~~~~l~s~s~dg~v~iwd~~ 180 (393)
..|...|+|++|+|. .+++|+.||.|+|||+.++. .....+.+|.+.|++|+|+| ++++|+|++.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 345668999999863 36689999999999998652 34556778999999999998 68999999999999999998
Q ss_pred CCeEEEEEecCCc-----eEEEEeCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeCCCcE
Q 016224 181 SGQCAGVINLGGE-----VGCMISEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDGAI 251 (393)
Q Consensus 181 ~~~~~~~~~~~~~-----~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I 251 (393)
++........... ...+.+++.+|+++ .++.|++||++......+..|...|.+++|+|+ +|++++.|+.|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCccee
Confidence 7655444433221 23455788888887 788999999988777788999999999999986 78899999999
Q ss_pred EEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccc------eEEEEEc-
Q 016224 252 LAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSV------VMSLLCW- 322 (393)
Q Consensus 252 ~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~------v~~l~~~- 322 (393)
++||++..... .......+|...|.+++|+ +++|++++.|+.|+|||+++++....+..|... +....++
T Consensus 276 ~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (435)
T 4e54_B 276 KIWDLRQVRGK-ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHP 354 (435)
T ss_dssp CEEETTTCCSS-SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECS
T ss_pred eEEeccccccc-ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcC
Confidence 99999876432 2233445789999999986 569999999999999999999888777665432 2233343
Q ss_pred -CCEEEEEe------------CCCcEEEEEcCCCcceEEEEeecCCccEEEE-EeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 323 -DQFLLSCS------------LDKTIKVWFATDSGNLEVTYTHNEEHGVLAL-CGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 323 -~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+.++++++ .++.|++||..+++.+..+.... ...+.++ +|+|++. +|++|+ |+.|+||+++
T Consensus 355 ~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~-~~~v~s~~~fspdg~---~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 355 RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE-SSGISSLNEFNPMGD---TLASAM-GYHILIWSQQ 429 (435)
T ss_dssp SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS-CCCCCCEEEECTTSS---CEEEEC-SSEEEECCCC
T ss_pred CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC-CCcEEEEEEECCCCC---EEEEEc-CCcEEEEECC
Confidence 33444443 34679999998887766655332 2345555 5777655 788775 8899999999
Q ss_pred ceee
Q 016224 389 SVII 392 (393)
Q Consensus 389 s~~l 392 (393)
+++.
T Consensus 430 ~gk~ 433 (435)
T 4e54_B 430 EART 433 (435)
T ss_dssp ----
T ss_pred cCee
Confidence 8863
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.9e-33 Score=275.29 Aligned_cols=266 Identities=24% Similarity=0.376 Sum_probs=226.2
Q ss_pred ceeecceEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe
Q 016224 106 AVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ 183 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~ 183 (393)
..|..+|.+++|+++ .+++++.|+.|++||.... .+..+.+|...|.+++|+|++++|++++.|+.|++||. +++
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~ 376 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQ 376 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCC
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC--eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCC
Confidence 346779999999987 3567999999999998654 56778999999999999999999999999999999996 566
Q ss_pred EEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEec
Q 016224 184 CAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 184 ~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~ 257 (393)
.+..+..+ ..+.++ .+++++|+++ .|+.|++||........+..|...|.+++|+|+ +|++++.|+.|++||..
T Consensus 377 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~ 456 (577)
T 2ymu_A 377 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN 456 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 66666644 445444 3577777765 788999999766555588899999999999998 99999999999999964
Q ss_pred cCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCC
Q 016224 258 VTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDK 333 (393)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg 333 (393)
. +....+.+|...|.+++++ +++|++++.|+.|++||. +++++.++.+|...|++++|+ +++|++++.|+
T Consensus 457 ~-----~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg 530 (577)
T 2ymu_A 457 G-----QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 530 (577)
T ss_dssp S-----CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred C-----CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC
Confidence 3 4566778899999999986 569999999999999995 688999999999999999998 67999999999
Q ss_pred cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 334 TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 334 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
.|+|||. +++.+..+..|.. .|.+++|+|++. +|+|++.|++|++||
T Consensus 531 ~v~lwd~-~~~~~~~~~~h~~--~v~~~~fs~dg~---~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 531 TVKLWNR-NGQLLQTLTGHSS--SVWGVAFSPDGQ---TIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECT-TSCEEEEEECCSS--CEEEEEECTTSS---CEEEEETTSCEEEEC
T ss_pred EEEEEeC-CCCEEEEEcCCCC--CEEEEEEcCCCC---EEEEEeCCCEEEEeC
Confidence 9999996 5666777776654 599999988765 899999999999997
No 38
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-34 Score=270.76 Aligned_cols=275 Identities=15% Similarity=0.213 Sum_probs=218.5
Q ss_pred ceeecceEEeeEec-C--cEEEecCCCeEEEEECCC---C--cEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEE
Q 016224 106 AVIKTDILCRNWVQ-G--NCMYGEKCKFLHSWTVGD---G--FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVW 177 (393)
Q Consensus 106 ~~~~~~i~c~~~~~-~--~~~~g~~dg~i~vwd~~~---~--~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iw 177 (393)
..|...|+|++|++ + .+++|+.||.|+|||+.+ + .+....+ .|...|++++|+|++++|++++.||+|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 45778999999998 5 466899999999999875 3 1223333 499999999999999999999999999999
Q ss_pred ECC---CCeEEEEEe-------------cCCceEEEE----eCCCEEEEE-cCCeEEEEECCCCcee-eecC--CCCcEE
Q 016224 178 DCA---SGQCAGVIN-------------LGGEVGCMI----SEGPWIFIG-VTNFVKAWNTQTNTDL-SLSG--PVGQVY 233 (393)
Q Consensus 178 d~~---~~~~~~~~~-------------~~~~~~~~~----~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~--~~~~v~ 233 (393)
|++ +++....+. ....+.++. +++.+++++ .|+.|++||+++++.+ .+.. |...|.
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~ 218 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVS 218 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEE
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceE
Confidence 995 554444332 222233332 356677765 7899999999998877 5665 789999
Q ss_pred EEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeec-CceeeEEEEEEcC------CEEEEecCCCcEEEeeCCCcc
Q 016224 234 AMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK-GHSLAVVSLVVGA------NKLYSGSMDNSIRVWNLETLQ 304 (393)
Q Consensus 234 ~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~------~~l~sg~~dg~i~iwd~~~~~ 304 (393)
+++|+|+ +|++++.||.|++||++.. +++..+. .|...|.++.+.+ .+|++++.|+.|++||+++++
T Consensus 219 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 219 SICIDEECCVLILGTTRGIIDIWDIRFN----VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTT----EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCc----cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 9999987 9999999999999999875 4455554 6788999997653 389999999999999999999
Q ss_pred eeeEecc--------------------------CccceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEeec----
Q 016224 305 CIQTLTE--------------------------HTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYTHN---- 353 (393)
Q Consensus 305 ~~~~~~~--------------------------~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---- 353 (393)
++..+.+ |...|.+++++ +++|++++.|+.|++||+.+++....+..+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 374 (437)
T 3gre_A 295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSD 374 (437)
T ss_dssp EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCC
T ss_pred EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCc
Confidence 8877764 45567888888 5689999999999999999888776666431
Q ss_pred -------------------------------CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 354 -------------------------------EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 354 -------------------------------~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
+...|.++++.++. +..+|++|+.||.|+||+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~-~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 375 VFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVD-ETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESS-SSEEEEEEETTSCEEEEC
T ss_pred eEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccC-CceEEEEEcCCceEEEeC
Confidence 44568999999872 234999999999999995
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.7e-34 Score=262.85 Aligned_cols=282 Identities=12% Similarity=0.134 Sum_probs=225.8
Q ss_pred eeecceEEeeEecCc--EEEecCCCeEEEEECCCCcE--EEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 107 VIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFK--LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 107 ~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~--~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
.|..+|+|++|++++ +++|+.|+.|++||+.++ + .+..+.+|...|++++|+|++++|++++.||.|++||+.++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC-cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 467799999999773 557889999999999887 5 88899999999999999999999999999999999999998
Q ss_pred eEEEEEe---cCCceEEEE--eCCCEEEEE-cCCeEEEEECCCCce----e-eecCCCCcEEEEEEeCC--EEEEEeCCC
Q 016224 183 QCAGVIN---LGGEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTD----L-SLSGPVGQVYAMAVGND--LLFAGTQDG 249 (393)
Q Consensus 183 ~~~~~~~---~~~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~----~-~~~~~~~~v~~l~~~~~--~l~~~~~dg 249 (393)
+....+. +...+.++. +++.+++++ .++.|++||+..+.. . ....|...|.+++|+++ +|++++.|+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 8665543 334454443 577777776 788999999998762 2 33678899999999987 999999999
Q ss_pred cEEEEEeccCC--------------ccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCc
Q 016224 250 AILAWKFNVTT--------------NCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHT 313 (393)
Q Consensus 250 ~I~vwd~~~~~--------------~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 313 (393)
.|++||++... ...+....+..|...|.+++++ +++|++++.|+.|++||+++++++..+..|.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 244 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 244 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC
Confidence 99999975321 0124556677889999999995 5699999999999999999999999999999
Q ss_pred cceEEEEEc--CCEEEEEeCCCcEEEEEcCC--Ccc-----------------------------e---------EEEEe
Q 016224 314 SVVMSLLCW--DQFLLSCSLDKTIKVWFATD--SGN-----------------------------L---------EVTYT 351 (393)
Q Consensus 314 ~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~--~~~-----------------------------~---------~~~~~ 351 (393)
..+.+++|+ +.+|+++ .|+.|++|++.+ +.- . ..+.
T Consensus 245 ~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (372)
T 1k8k_C 245 LPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD- 322 (372)
T ss_dssp CCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS-
T ss_pred CCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc-
Confidence 999999998 4556655 999999999977 310 0 1111
Q ss_pred ecCCccEEEEEeeeCC-CCCcEEEEEeCCCeEEEEeCCcee
Q 016224 352 HNEEHGVLALCGMPDS-EGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 352 ~~~~~~v~~~~~~~~~-~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
..+...|.+++|.+.. .+..+|++++.||.|++|++.+++
T Consensus 323 ~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 323 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 1344569999877543 112499999999999999997653
No 40
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5e-34 Score=257.59 Aligned_cols=243 Identities=18% Similarity=0.201 Sum_probs=198.4
Q ss_pred ceeecceEEeeEecC--cEEEecCCCeEEEEECCCC-cEEEEEecCCcCCEEEEEecC--CCCEEEEEeCCCcEEEEECC
Q 016224 106 AVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPS--GSDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~-~~~~~~l~~h~~~I~~i~~s~--~~~~l~s~s~dg~v~iwd~~ 180 (393)
..|...|.+++|+++ .+++|+.|++|+|||+.++ .+++.++.+|..+|++++|++ ++++|+||+.|++|+|||++
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 357779999999976 4668999999999999743 367789999999999999986 38999999999999999998
Q ss_pred CCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC----EEEEEeCCCcEEEEEe
Q 016224 181 SGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND----LLFAGTQDGAILAWKF 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~----~l~~~~~dg~I~vwd~ 256 (393)
+++... ...+..|...|.+++|+|+ +|++++.|+.|++||+
T Consensus 86 ~~~~~~-----------------------------------~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~ 130 (297)
T 2pm7_B 86 NGRWSQ-----------------------------------IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEF 130 (297)
T ss_dssp SSCBCC-----------------------------------CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEB
T ss_pred CCceEE-----------------------------------EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEe
Confidence 764210 1134568889999999874 8999999999999999
Q ss_pred ccCCccccCceeecCceeeEEEEEEcC---------------CEEEEecCCCcEEEeeCCCcc----eeeEeccCccceE
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVVGA---------------NKLYSGSMDNSIRVWNLETLQ----CIQTLTEHTSVVM 317 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~---------------~~l~sg~~dg~i~iwd~~~~~----~~~~~~~~~~~v~ 317 (393)
+.... .....+.+|...|.+++|++ ++|++|+.|++|++||+++++ ++.++.+|...|.
T Consensus 131 ~~~~~--~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 131 KENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp CSSSC--BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred cCCCc--eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceE
Confidence 87532 12355678999999999975 489999999999999998765 6678899999999
Q ss_pred EEEEcC-----CEEEEEeCCCcEEEEEcCCCcc--eEEEE-eecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 318 SLLCWD-----QFLLSCSLDKTIKVWFATDSGN--LEVTY-THNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 318 ~l~~~~-----~~l~s~s~dg~i~iwd~~~~~~--~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+++|++ .+|++++.|++|+|||+..... ..... .......+.+++|+|++. +|++++.|+.|+||++.
T Consensus 209 ~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 209 DVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC---CEEEEETTSCEEEEEEC
T ss_pred EEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC---EEEEEcCCCcEEEEEEC
Confidence 999984 5899999999999999976432 11121 123345699999998766 89999999999999976
No 41
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=258.19 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=203.8
Q ss_pred EEEEEecCCcCCEEEEEecCC----CCEEEEEeCCCcEEEEECCCCeEEE--EEecC-CceEEEE--eCCCEEEEE-cCC
Q 016224 141 KLLTQLEGHQKVVSGITLPSG----SDKLYSGSKDETVRVWDCASGQCAG--VINLG-GEVGCMI--SEGPWIFIG-VTN 210 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~----~~~l~s~s~dg~v~iwd~~~~~~~~--~~~~~-~~~~~~~--~~~~~l~~~-~~~ 210 (393)
.+.+.+++|.+.|++++|+++ +.+|+||+.|++|+|||+.+++... .+..+ ..+.++. +++.+++++ .|+
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 445677899999999999874 6799999999999999998876543 34433 3344433 567777765 899
Q ss_pred eEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCE
Q 016224 211 FVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANK 285 (393)
Q Consensus 211 ~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 285 (393)
.|++||+.+++.+ .+..+...+.+++|+|+ +|++++.|+.|++||++.. +....+..|...+.+++++ +++
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~----~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG----KKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC----SEEEEEECSSSCEEEEEECTTSSE
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC----ceeEEecCCCceEEEEEECCCCCE
Confidence 9999999998877 67788889999999998 9999999999999999887 4455667788889999886 569
Q ss_pred EEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEe
Q 016224 286 LYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCG 363 (393)
Q Consensus 286 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 363 (393)
|++++.|+.|++||+++++++.++.+|...|.+++|+ +++|++++.|+.|+|||+++......+..|.. .+.+++|
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~ 256 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS--WVLNVAF 256 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS--CEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC--ceEEEEE
Confidence 9999999999999999999999999999999999998 67999999999999999998877766666554 4999999
Q ss_pred eeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 364 MPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 364 ~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+|++. +|++++.|++|++||+.++++
T Consensus 257 sp~~~---~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 257 CPDDT---HFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp CTTSS---EEEEEETTSCEEEEETTTTEE
T ss_pred CCCCC---EEEEEeCCCcEEEEeCCCCEE
Confidence 88766 999999999999999988754
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2e-34 Score=269.33 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=212.3
Q ss_pred eEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc-e--EEEEeCCCEEEE
Q 016224 130 FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE-V--GCMISEGPWIFI 206 (393)
Q Consensus 130 ~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~ 206 (393)
.+..|+..+. ...+++++|.+.|++++|+|++++|+||+.|++|+|||+.+++....+..+.. + ..+.++++++++
T Consensus 47 ~~~~~~~~~~-~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 47 TAVSFNPTDL-VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp GCCCCCCCCC-EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred ccccccccee-EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEE
Confidence 3445776665 88899999999999999999999999999999999999999999888876543 2 345578888887
Q ss_pred E-cCCeEEEEECCCCc--------eeeecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEeccCCccccCceee-----
Q 016224 207 G-VTNFVKAWNTQTNT--------DLSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPAASL----- 269 (393)
Q Consensus 207 ~-~~~~i~v~d~~~~~--------~~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~~~~~~~----- 269 (393)
+ .|+.+++|++.+.. ...+.+|...|.++.|.|+ .|++++.|++|++||+.++.. +..+
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~----~~~~~~~~~ 201 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR----ISIFGSEFP 201 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE----EEEECCCSS
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE----EEEeecccC
Confidence 6 88999999987532 1256789999999999875 799999999999999988742 2222
Q ss_pred cCceeeEEEEEEc---CCEEEEecCCCcEEEeeCC-CcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCC
Q 016224 270 KGHSLAVVSLVVG---ANKLYSGSMDNSIRVWNLE-TLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDS 343 (393)
Q Consensus 270 ~~~~~~v~~l~~~---~~~l~sg~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~ 343 (393)
.+|...|.+++++ +++|++|+.|++|++||++ ..+.+..+.+|...|.+++|+ +++|++++.|++|++||++++
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 5788999999984 5799999999999999998 567889999999999999998 679999999999999999988
Q ss_pred cceEEEEeecCC-----ccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 344 GNLEVTYTHNEE-----HGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 344 ~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
..+..+..+... ..+.+++|+|++. +|++|+.||.|++||+.+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGR---LLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSS---EEEEECTTSCEEEEETTTCC
T ss_pred cEEEEecccccccccccCceEEEEECCCCC---EEEEEECCCCEEEEECCCCc
Confidence 777665543221 2377899988766 99999999999999987664
No 43
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.5e-33 Score=257.46 Aligned_cols=277 Identities=17% Similarity=0.234 Sum_probs=215.8
Q ss_pred ceeecceEEeeEecCc--EE-EecC---CCeEEEEECCCCcEEEEEecCCcCCEEEEEecCC---CCEEEEEeCCCcEEE
Q 016224 106 AVIKTDILCRNWVQGN--CM-YGEK---CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSG---SDKLYSGSKDETVRV 176 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~--~~-~g~~---dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~---~~~l~s~s~dg~v~i 176 (393)
..|...|.+++|++++ ++ +|+. |+.|++||+.++........+|...|++++|+|+ +++|++++.||.|++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 94 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI 94 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence 3477899999999864 33 4555 9999999999873333334479999999999998 699999999999999
Q ss_pred EECCCCe-EEEEEecC-CceEEE--------EeCCCEEEEE-cCCeEEEEECCCCc-ee-eecCCCC----cEEEEE---
Q 016224 177 WDCASGQ-CAGVINLG-GEVGCM--------ISEGPWIFIG-VTNFVKAWNTQTNT-DL-SLSGPVG----QVYAMA--- 236 (393)
Q Consensus 177 wd~~~~~-~~~~~~~~-~~~~~~--------~~~~~~l~~~-~~~~i~v~d~~~~~-~~-~~~~~~~----~v~~l~--- 236 (393)
||+.+++ .+..+..+ ..+.++ .+++.+++++ .|+.|++||+.++. .. .+..+.. .+.++.
T Consensus 95 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 174 (357)
T 3i2n_A 95 WNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGN 174 (357)
T ss_dssp ECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEEC
T ss_pred EeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEe
Confidence 9999887 77777654 445444 2467777765 78899999999876 33 4544443 899998
Q ss_pred -EeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC-----CEEEEecCCCcEEEeeCCCcceeeE
Q 016224 237 -VGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA-----NKLYSGSMDNSIRVWNLETLQCIQT 308 (393)
Q Consensus 237 -~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~l~sg~~dg~i~iwd~~~~~~~~~ 308 (393)
|+++ +|++++.|+.|++||++... . .....|...|.++++++ ++|++++.|+.|++||+++++.+..
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~----~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMA----L-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTE----E-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCc----e-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc
Confidence 4555 99999999999999998863 2 33355778899999864 6899999999999999998877666
Q ss_pred ec-----cCccceEEEEEcC--C-EEEEEeCCCcEEEEEcCCCcc-------------------eEEEEeecCCccEEEE
Q 016224 309 LT-----EHTSVVMSLLCWD--Q-FLLSCSLDKTIKVWFATDSGN-------------------LEVTYTHNEEHGVLAL 361 (393)
Q Consensus 309 ~~-----~~~~~v~~l~~~~--~-~l~s~s~dg~i~iwd~~~~~~-------------------~~~~~~~~~~~~v~~~ 361 (393)
+. .|...|.++.|++ . +|++++.||.|++||++.... +..+..| ...+.++
T Consensus 250 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~v~~~ 327 (357)
T 3i2n_A 250 FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS--TQPISSL 327 (357)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC--SSCEEEE
T ss_pred eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC--CCCeeEE
Confidence 65 8999999999984 3 799999999999999975432 2333333 4569999
Q ss_pred EeeeCCCCCcEEE-EEeCCCeEEEEeCCceee
Q 016224 362 CGMPDSEGKPVLL-CSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 362 ~~~~~~~~~~~l~-s~s~dg~I~iwd~~s~~l 392 (393)
+|+|++. +|+ +++.||.|++||+.+.++
T Consensus 328 ~~s~~~~---~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 328 DWSPDKR---GLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EECSSST---TEEEEEETTSEEEEEEECC---
T ss_pred EEcCCCC---eEEEEecCCCcEEEEECCCccc
Confidence 9998765 666 899999999999998765
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.1e-33 Score=259.04 Aligned_cols=238 Identities=16% Similarity=0.227 Sum_probs=190.2
Q ss_pred cceeecceEEeeEecC-cEEEecCCCeEEEEECCCCcEEE----EEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 016224 105 RAVIKTDILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLL----TQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDC 179 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~----~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~ 179 (393)
...|...|++++|+++ .+++++.||+|+|||+.++ +.. ....+|...|++|+|+|++++|++++.|++|++||+
T Consensus 90 ~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~-~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEK-ESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp EEECSSCEEEEEEETTTEEEEEETTSCEEEC---------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEEEEECCCEEEEeecccc-ceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 3457778999999987 5667999999999999876 332 345589999999999999999999999999999999
Q ss_pred CCCeEEEEEecCC-ceEEEE--eCC--CEEEEEcCCeEEEEECCCCcee---eecCCCCcEEEEEEeCC---EEEEEeCC
Q 016224 180 ASGQCAGVINLGG-EVGCMI--SEG--PWIFIGVTNFVKAWNTQTNTDL---SLSGPVGQVYAMAVGND---LLFAGTQD 248 (393)
Q Consensus 180 ~~~~~~~~~~~~~-~~~~~~--~~~--~~l~~~~~~~i~v~d~~~~~~~---~~~~~~~~v~~l~~~~~---~l~~~~~d 248 (393)
.+++.+..+..+. .+.++. +++ .++.++.|+.|++||+++++.. ....+...+.+++|+|+ +|++|+.|
T Consensus 169 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d 248 (357)
T 4g56_B 169 SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET 248 (357)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc
Confidence 9999999987654 454443 343 3445568999999999988765 34457788999999986 89999999
Q ss_pred CcEEEEEeccCCccccCceeecCceeeEEEEEEcC---CEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc---
Q 016224 249 GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--- 322 (393)
Q Consensus 249 g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--- 322 (393)
+.|++||+++. +....+..|...|.+++|++ .+|++++.|++|+|||+++++++..+ +|...|++++|+
T Consensus 249 ~~i~~wd~~~~----~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d 323 (357)
T 4g56_B 249 GNVSLVNIKNP----DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLD 323 (357)
T ss_dssp SCEEEEESSCG----GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSS
T ss_pred cceeEEECCCC----cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCC
Confidence 99999999886 56778889999999999963 47999999999999999999887765 799999999997
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcceEE
Q 016224 323 DQFLLSCSLDKTIKVWFATDSGNLEV 348 (393)
Q Consensus 323 ~~~l~s~s~dg~i~iwd~~~~~~~~~ 348 (393)
+.+|++++.|++|++|++.+..+...
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~~~~~~~~ 349 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLPSEGRTEN 349 (357)
T ss_dssp TTEEEEEETTSCEEEEECC-------
T ss_pred CCEEEEEcCCCeEEEEECCCCCcccc
Confidence 46999999999999999976544433
No 45
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-33 Score=261.01 Aligned_cols=277 Identities=19% Similarity=0.322 Sum_probs=226.1
Q ss_pred cceeecceEEeeEecC---cEEEecCCCeEEEEEC----CCCcE-----EEEEecC----------CcCCEEEEEecCCC
Q 016224 105 RAVIKTDILCRNWVQG---NCMYGEKCKFLHSWTV----GDGFK-----LLTQLEG----------HQKVVSGITLPSGS 162 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~---~~~~g~~dg~i~vwd~----~~~~~-----~~~~l~~----------h~~~I~~i~~s~~~ 162 (393)
...|..+|.|++|+++ .+++|+.|+.|++|++ .++.. ....+.. |...|++++|+|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 3445579999999987 3567999999999999 87731 4555554 78899999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEecC-CceEEEE--eCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCc------
Q 016224 163 DKLYSGSKDETVRVWDCASGQCAGVINLG-GEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQ------ 231 (393)
Q Consensus 163 ~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~------ 231 (393)
++|++++.||.|++|| .+++.+..+..+ ..+.++. +++.+++++ .++.|++||+.+++.. .+..+...
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 9999999999999999 567777777644 4454443 577777665 7899999999998876 55555555
Q ss_pred ---------EEEEEEeCC-EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEee
Q 016224 232 ---------VYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWN 299 (393)
Q Consensus 232 ---------v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd 299 (393)
+.++.|+++ .+++++.++.|++||+... +....+..|...|.+++++ +++|++++.|+.|++||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK----TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS----SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC----ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 888999888 9999999999999999886 5567777899999999986 56899999999999999
Q ss_pred CCCcceeeEeccCccceEEEEEcCC-EEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC
Q 016224 300 LETLQCIQTLTEHTSVVMSLLCWDQ-FLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN 378 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~v~~l~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~ 378 (393)
+++++.+..+..|...|.++.|+++ +|++++.|+.|++||+.+.+.+..+..+. ..+.+++|+|++. +|++++.
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~i~~~~~s~~~~---~l~~~~~ 350 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDG--VPIFAGRISQDGQ---KYAVAFM 350 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTT--CCEEEEEECTTSS---EEEEEET
T ss_pred CCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCC--ccEEEEEEcCCCC---EEEEEEC
Confidence 9999999999999999999999843 99999999999999998887776666544 3589999988765 9999999
Q ss_pred CCeEEEEeCCcee
Q 016224 379 DNSVRFYDLPSVI 391 (393)
Q Consensus 379 dg~I~iwd~~s~~ 391 (393)
||.|++||+.+++
T Consensus 351 dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 351 DGQVNVYDLKKLN 363 (425)
T ss_dssp TSCEEEEECHHHH
T ss_pred CCeEEEEECCCCc
Confidence 9999999998654
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-32 Score=247.31 Aligned_cols=248 Identities=22% Similarity=0.373 Sum_probs=209.0
Q ss_pred CcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCC-ceEEE--EeCCCEEEEE-cCCeEEE
Q 016224 139 GFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGG-EVGCM--ISEGPWIFIG-VTNFVKA 214 (393)
Q Consensus 139 ~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~~-~~~~i~v 214 (393)
.+.+..++.+|...|++++|+|++++|++++.||.|++|++.+++....+..+. .+..+ .+++++++++ .|+.|++
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 347788999999999999999999999999999999999999999888887553 34433 3678887765 8889999
Q ss_pred EECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEe
Q 016224 215 WNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSG 289 (393)
Q Consensus 215 ~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg 289 (393)
||+.+++.+ .+..|...|.++.|+++ +|++++.|+.|++||+++. +....+..|...|.++.++ +++|+++
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC----EEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 999998876 77889999999999987 9999999999999999876 5567778899999999986 5699999
Q ss_pred cCCCcEEEeeCCCcceeeEec-cCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeC
Q 016224 290 SMDNSIRVWNLETLQCIQTLT-EHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPD 366 (393)
Q Consensus 290 ~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 366 (393)
+.|+.|++||+++++.+..+. .+...+..++|+ +++|++++.|+.|++||+++++.+..+..+..........+.+.
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 999999999999998887764 456778899998 67999999999999999998887777766655443333444432
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 367 SEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 367 ~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
++.+|++++.||.|++||+.++++
T Consensus 248 --~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 248 --GGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp --SSCEEEECCTTSCEEEEETTTCCE
T ss_pred --CCcEEEEECCCCEEEEEECCCchh
Confidence 445999999999999999998754
No 47
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=258.96 Aligned_cols=247 Identities=17% Similarity=0.229 Sum_probs=192.7
Q ss_pred EEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECC------------CCeEEEEEecCCceEEE--
Q 016224 132 HSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA------------SGQCAGVINLGGEVGCM-- 197 (393)
Q Consensus 132 ~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~------------~~~~~~~~~~~~~~~~~-- 197 (393)
+.|++... ....|...|.+++|+|||++|++++ |+++++||.. .+.+...+.....+.++
T Consensus 17 r~w~~~~~-----~~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (344)
T 4gqb_B 17 REWNLPPN-----APACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW 90 (344)
T ss_dssp ------CC-----SCSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE
T ss_pred cccCCCCC-----CcccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE
Confidence 56776544 1245778899999999999999888 7788888731 11222333334444443
Q ss_pred EeCCCEEEEEcCCeEEEEECCCCcee-----eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeec
Q 016224 198 ISEGPWIFIGVTNFVKAWNTQTNTDL-----SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK 270 (393)
Q Consensus 198 ~~~~~~l~~~~~~~i~v~d~~~~~~~-----~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~ 270 (393)
.+++.+++++.|+.|++||+.+++.. ...+|...|.+++|+++ +|++++.|+.|++||++++ +.+..+.
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~----~~~~~~~ 166 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ----VVLSSYR 166 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEEC
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC----cEEEEEc
Confidence 35666666679999999999988644 34589999999999998 9999999999999999887 6678889
Q ss_pred CceeeEEEEEEcC---CEEEEecCCCcEEEeeCCCcceeeEec--cCccceEEEEEc---CCEEEEEeCCCcEEEEEcCC
Q 016224 271 GHSLAVVSLVVGA---NKLYSGSMDNSIRVWNLETLQCIQTLT--EHTSVVMSLLCW---DQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 271 ~~~~~v~~l~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~ 342 (393)
+|...|.+++|++ .+|++++.|++|++||+++++++..+. .|...+.+++|+ +++|++|+.|++|+|||+++
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 9999999999963 478999999999999999999988875 455678999997 45899999999999999999
Q ss_pred CcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 343 SGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
++.+..+..|.. .|.+++|+|++. ++|++++.|++|+|||+.++++
T Consensus 247 ~~~~~~~~~h~~--~v~~v~fsp~g~--~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 247 TSCVLSSAVHSQ--CVTGLVFSPHSV--PFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp --CCEEEECCSS--CEEEEEECSSSS--CCEEEEETTSCEEEECTTCCEE
T ss_pred CcEEEEEcCCCC--CEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCcE
Confidence 888888877665 499999998753 3899999999999999998875
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.9e-32 Score=267.22 Aligned_cols=271 Identities=23% Similarity=0.348 Sum_probs=227.3
Q ss_pred cceeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|...|.++.|++++ +++++.|+.|++||... +.+..+.+|...|.+++|+|++++|++++.|++|++||+...
T Consensus 258 ~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~ 335 (577)
T 2ymu_A 258 LTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ 335 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred EecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 34467799999999774 66799999999999754 677889999999999999999999999999999999998765
Q ss_pred eEEEEEecCCceEEE--EeCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEec
Q 016224 183 QCAGVINLGGEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 183 ~~~~~~~~~~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~ 257 (393)
.......+...+.++ .+++++++++ .++.|++|+........+..|...|.+++|+|+ +|++++.|+.|++||..
T Consensus 336 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~ 415 (577)
T 2ymu_A 336 HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 415 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 543333334445443 3678888876 778999999766555588899999999999998 89999999999999954
Q ss_pred cCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCC
Q 016224 258 VTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDK 333 (393)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg 333 (393)
. +....+.+|...|.+++++ +.+|++++.|+.|++||. +++.+..+.+|...|.+++|+ +++|++++.|+
T Consensus 416 ~-----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 416 G-----QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp C-----CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTS
T ss_pred C-----CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 3 4567788899999999986 569999999999999996 578889999999999999998 67999999999
Q ss_pred cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 334 TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 334 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
.|++||. +++.+..+..|.. .+.+++|+|++. +|++++.||.|++||+..
T Consensus 490 ~i~iw~~-~~~~~~~~~~h~~--~v~~l~~s~dg~---~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 490 TVKLWNR-NGQLLQTLTGHSS--SVRGVAFSPDGQ---TIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSS--CEEEEEECTTSS---CEEEEETTSEEEEECTTS
T ss_pred EEEEEcC-CCCEEEEEeCCCC--CEEEEEEcCCCC---EEEEEECcCEEEEEeCCC
Confidence 9999996 5666676666654 499999988765 899999999999999753
No 49
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-34 Score=271.25 Aligned_cols=279 Identities=15% Similarity=0.199 Sum_probs=225.7
Q ss_pred ceeecceEEeeEecC--cEEEecCCCeEEEEECCC---CcEEEEEecCCcCCEEEEEecCC-CCEEEEEeCCCcEEEEEC
Q 016224 106 AVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGD---GFKLLTQLEGHQKVVSGITLPSG-SDKLYSGSKDETVRVWDC 179 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~---~~~~~~~l~~h~~~I~~i~~s~~-~~~l~s~s~dg~v~iwd~ 179 (393)
..|...|.|++|+++ .+++|+.|+.|++||+.+ +.+.+..+.+|...|++++|+|+ +++|++++.|+.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 346779999999977 366789999999999987 33688899999999999999998 899999999999999999
Q ss_pred CCCe------EEEEE----ecCCceEEE--EeC-CCEEEEE-cCCeEEEEECCCCcee-eecCC------CCcEEEEEEe
Q 016224 180 ASGQ------CAGVI----NLGGEVGCM--ISE-GPWIFIG-VTNFVKAWNTQTNTDL-SLSGP------VGQVYAMAVG 238 (393)
Q Consensus 180 ~~~~------~~~~~----~~~~~~~~~--~~~-~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~------~~~v~~l~~~ 238 (393)
.+++ ....+ .+...+.++ .++ +.+++++ .++.|++||+++++.. .+..+ ...|.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 9876 33222 122334333 345 5677775 7889999999998876 44444 7889999999
Q ss_pred CC---EEEEEeCCC---cEEEEEeccCCccccCceeec-CceeeEEEEEEc---CCEEEEecCCCcEEEeeCCCcceeeE
Q 016224 239 ND---LLFAGTQDG---AILAWKFNVTTNCFEPAASLK-GHSLAVVSLVVG---ANKLYSGSMDNSIRVWNLETLQCIQT 308 (393)
Q Consensus 239 ~~---~l~~~~~dg---~I~vwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~ 308 (393)
|+ +|++++.|+ .|++||++... .+...+. +|...|.+++|+ +++|++++.|+.|++||+++++++..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 300 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNAN---TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQ 300 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTT---SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCC---CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcccee
Confidence 86 899999999 99999998763 3455666 799999999995 46899999999999999999999999
Q ss_pred eccCccceEEEEEc--C-CEEEEEeCCCcEEEEEcCCCcceEEE--------------Eeec------------------
Q 016224 309 LTEHTSVVMSLLCW--D-QFLLSCSLDKTIKVWFATDSGNLEVT--------------YTHN------------------ 353 (393)
Q Consensus 309 ~~~~~~~v~~l~~~--~-~~l~s~s~dg~i~iwd~~~~~~~~~~--------------~~~~------------------ 353 (393)
+..|...|.+++|+ + .+|++++.|+.|+|||+.+....... ..+.
T Consensus 301 ~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (416)
T 2pm9_A 301 FPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPT 380 (416)
T ss_dssp EECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCS
T ss_pred ecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCc
Confidence 99999999999998 3 69999999999999999865532211 0000
Q ss_pred -CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 354 -EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 354 -~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
....+..++|+|++. +|++++.|+.|+||++.+.
T Consensus 381 ~~~~~~~~~~~s~dg~---~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 381 WYGEPSPAAHWAFGGK---LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp TTCCCSCCCEEETTTE---EECBCTTSSCBCCBCCCCC
T ss_pred cccCCccceEEeeCCe---EEEEeCCCCeEEEEEeccC
Confidence 223455788888765 9999999999999999874
No 50
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.6e-33 Score=255.24 Aligned_cols=280 Identities=15% Similarity=0.231 Sum_probs=228.5
Q ss_pred cccceeecceEEeeEecC-----cEEEecCCCeEEEEECCC-CcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEE
Q 016224 103 NNRAVIKTDILCRNWVQG-----NCMYGEKCKFLHSWTVGD-GFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRV 176 (393)
Q Consensus 103 ~~~~~~~~~i~c~~~~~~-----~~~~g~~dg~i~vwd~~~-~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~i 176 (393)
.....|...|+|++|+++ .+++|+.||.|++||+.+ +......+.+|...|++++|+|++++|++++.||.|++
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKM 112 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEE
Confidence 344567889999999986 356799999999999997 54555889999999999999999999999999999999
Q ss_pred EECCCCeEEEEEecCCceEEEE----eCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCCEEEEEeCCCcE
Q 016224 177 WDCASGQCAGVINLGGEVGCMI----SEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAI 251 (393)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I 251 (393)
||+.+++.+....+...+.++. +++.+++++ .|+.|++||+++++.+........+.++.+.++.+++++.++.+
T Consensus 113 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 192 (368)
T 3mmy_A 113 WDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGL 192 (368)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCE
T ss_pred EEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcE
Confidence 9999999988887777776654 356666654 78999999999988775555556889999999999999999999
Q ss_pred EEEEeccCCccccCceeecCceeeEEEEEEcCCE----EEEecCCCcEEEeeCCCc---ceeeEeccCcc----------
Q 016224 252 LAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANK----LYSGSMDNSIRVWNLETL---QCIQTLTEHTS---------- 314 (393)
Q Consensus 252 ~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----l~sg~~dg~i~iwd~~~~---~~~~~~~~~~~---------- 314 (393)
.+|+++..............+...+.++..+... +++++.|+.|++||++.. +.+..+..|..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
T 3mmy_A 193 IVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQD 272 (368)
T ss_dssp EEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEE
T ss_pred EEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccccccc
Confidence 9999987654333333344456666666665543 999999999999999987 66788888877
Q ss_pred --ceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 315 --VVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 315 --~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
.|.+++|+ +++|++++.||.|++||+.+++.+..+..|. ..+.+++|+|++. +|++++.|+..+.|++
T Consensus 273 ~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~g~---~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 273 IYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD--QPISACCFNHNGN---IFAYASSYDWSKGHEF 344 (368)
T ss_dssp ECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS--SCEEEEEECTTSS---CEEEEECCCSTTCGGG
T ss_pred ccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC--CCceEEEECCCCC---eEEEEecccccccccc
Confidence 79999998 5699999999999999999887776666554 4599999988766 8999999886555554
No 51
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.4e-32 Score=256.37 Aligned_cols=281 Identities=15% Similarity=0.169 Sum_probs=221.6
Q ss_pred ceeecceEEeeEec-C--cEEEecCCCeEEEEECCCCcEEEEEe-------------cCCcCCEEEEEecC-CCCEEEEE
Q 016224 106 AVIKTDILCRNWVQ-G--NCMYGEKCKFLHSWTVGDGFKLLTQL-------------EGHQKVVSGITLPS-GSDKLYSG 168 (393)
Q Consensus 106 ~~~~~~i~c~~~~~-~--~~~~g~~dg~i~vwd~~~~~~~~~~l-------------~~h~~~I~~i~~s~-~~~~l~s~ 168 (393)
..|...|+|++|++ + .+++|+.||.|++||+.++ +....+ .+|...|++++|+| ++++|+++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENS-SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCC-SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCC-cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 34778999999998 4 4668999999999999876 222222 36999999999999 78899999
Q ss_pred eCCCcEEEEECCCCeEEEEEecCCceEEEE--e---CCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC-
Q 016224 169 SKDETVRVWDCASGQCAGVINLGGEVGCMI--S---EGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND- 240 (393)
Q Consensus 169 s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~---~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~- 240 (393)
+.||.|++||+.+++.+..+.....+..+. + ++.+++++ .++.|++||+.+++.. .+..|...|.+++|+|+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence 999999999999999999998777765554 2 34466665 7889999999988766 77789999999999987
Q ss_pred --EEEEEeCCCcEEEEEeccCCccc------------cCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcc
Q 016224 241 --LLFAGTQDGAILAWKFNVTTNCF------------EPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQ 304 (393)
Q Consensus 241 --~l~~~~~dg~I~vwd~~~~~~~~------------~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~ 304 (393)
+|++++.||.|++||++...... ........|...|.+++++ +++|++++.|+.|++||+++++
T Consensus 199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 68999999999999998764211 1122235788899999996 5689999999999999999988
Q ss_pred eeeEeccCcc------ceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe
Q 016224 305 CIQTLTEHTS------VVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC 377 (393)
Q Consensus 305 ~~~~~~~~~~------~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s 377 (393)
....+..+.. ....+... ...+++++.|+.|++||+.+++.+..+..|.. .+.+++|+|++. +|++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~---~l~s~~ 353 (408)
T 4a11_B 279 NTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK--TVDCCVFQSNFQ---ELYSGS 353 (408)
T ss_dssp BCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS--CEEEEEEETTTT---EEEEEE
T ss_pred cceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC--eEEEEEEcCCCC---EEEEEC
Confidence 7655543221 11122222 45777788899999999998888777766654 599999998766 999999
Q ss_pred CCCeEEEEeCCceee
Q 016224 378 NDNSVRFYDLPSVII 392 (393)
Q Consensus 378 ~dg~I~iwd~~s~~l 392 (393)
.||.|++||+.+++.
T Consensus 354 ~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 354 RDCNILAWVPSLYEP 368 (408)
T ss_dssp TTSCEEEEEECC---
T ss_pred CCCeEEEEeCCCCCc
Confidence 999999999998753
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.1e-32 Score=246.12 Aligned_cols=269 Identities=15% Similarity=0.236 Sum_probs=217.9
Q ss_pred ceeecceEEeeEecCc-E-EEecCCCeEEEEECCCCc--EEEEEec--CCcCCEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 016224 106 AVIKTDILCRNWVQGN-C-MYGEKCKFLHSWTVGDGF--KLLTQLE--GHQKVVSGITLPSGSDKLYSGSKDETVRVWDC 179 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~-~-~~g~~dg~i~vwd~~~~~--~~~~~l~--~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~ 179 (393)
..|...|.++.|++++ . ++++ |+.|++||+.++. ..+..+. +|...|.+++|+|++++|++++.|+.|++||+
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 3577899999999874 3 3455 9999999998652 2233333 79999999999999999999999999999999
Q ss_pred CCCe--EEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCc
Q 016224 180 ASGQ--CAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGA 250 (393)
Q Consensus 180 ~~~~--~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~ 250 (393)
.+++ ....+..+ ..+..+ .+++.+++++ .++.|++||+++++.. .+..|...|.+++|+++ +|++++.|+.
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 206 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCc
Confidence 9887 44444443 334443 3577777765 7899999999998877 67789999999999987 9999999999
Q ss_pred EEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEE
Q 016224 251 ILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFL 326 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l 326 (393)
|++||++... ....+ .+...+.+++++ +++|++++.|+.|++||+++++. ..+..|...+.++.|+ +++|
T Consensus 207 i~~~d~~~~~----~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l 280 (337)
T 1gxr_A 207 VRSWDLREGR----QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWF 280 (337)
T ss_dssp EEEEETTTTE----EEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEECCCCc----eEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEE
Confidence 9999998763 33333 366778888885 56999999999999999998775 4677899999999998 6799
Q ss_pred EEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 327 LSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 327 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
++++.|+.|++||+.+++.+.. . .+...+.++.|+|++. +|++++.||.|++|++
T Consensus 281 ~~~~~dg~i~~~~~~~~~~~~~-~--~~~~~v~~~~~s~~~~---~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 281 VSTGKDNLLNAWRTPYGASIFQ-S--KESSSVLSCDISVDDK---YIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEETTSEEEEEETTTCCEEEE-E--ECSSCEEEEEECTTSC---EEEEEETTSCEEEEEE
T ss_pred EEecCCCcEEEEECCCCeEEEE-e--cCCCcEEEEEECCCCC---EEEEecCCCeEEEEEE
Confidence 9999999999999988766533 2 2345699999988765 9999999999999997
No 53
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.7e-32 Score=246.18 Aligned_cols=239 Identities=20% Similarity=0.346 Sum_probs=201.0
Q ss_pred EEEEEecCCcCCEEEEEecCCC-CEEEEEeCCCcEEEEECCC-----CeEEEEEecCC-ceEE--EEeCCCEEEEE-cCC
Q 016224 141 KLLTQLEGHQKVVSGITLPSGS-DKLYSGSKDETVRVWDCAS-----GQCAGVINLGG-EVGC--MISEGPWIFIG-VTN 210 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~-~~l~s~s~dg~v~iwd~~~-----~~~~~~~~~~~-~~~~--~~~~~~~l~~~-~~~ 210 (393)
.+..+|.+|.+.|++++|+|++ ++|+||+.|++|++|++.. +..+..+..+. .+.+ +.+++.+++++ .|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 5667899999999999999965 8999999999999999864 23455665543 3433 34678888765 789
Q ss_pred eEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC----
Q 016224 211 FVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---- 283 (393)
Q Consensus 211 ~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---- 283 (393)
.|++||+.+++.+ .+.+|...|.+++|+++ +|++++.|+.|++||++. .....+.+|...|.++.+.+
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-----~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-----QCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-----CEEEEECCCSSCEEEEEECCC---
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----CeEEEEeccCCcEEEEEEccCCCC
Confidence 9999999999877 78899999999999987 999999999999999864 34567788999999998854
Q ss_pred ----CEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCcc
Q 016224 284 ----NKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHG 357 (393)
Q Consensus 284 ----~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 357 (393)
.+|++++.|+.|++||+++++....+.+|...|.+++|+ +++|++++.|+.|+|||+.+.+.+..+.. ...
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~ 239 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA---QDE 239 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC---CSC
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---CCc
Confidence 379999999999999999999999999999999999998 67999999999999999988776665543 345
Q ss_pred EEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 358 VLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 358 v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+.+++|+|++. +|++++. ..|++|++....
T Consensus 240 v~~~~~sp~~~---~la~~~~-~~i~v~~~~~~~ 269 (319)
T 3frx_A 240 VFSLAFSPNRY---WLAAATA-TGIKVFSLDPQY 269 (319)
T ss_dssp EEEEEECSSSS---EEEEEET-TEEEEEEETTEE
T ss_pred EEEEEEcCCCC---EEEEEcC-CCcEEEEeCcCe
Confidence 99999998765 7777765 469999988764
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.1e-33 Score=255.83 Aligned_cols=242 Identities=20% Similarity=0.242 Sum_probs=194.1
Q ss_pred ceeecceEEeeEecC--cEEEecCCCeEEEEECCCCc-EEEEEecCCcCCEEEEEecC--CCCEEEEEeCCCcEEEEECC
Q 016224 106 AVIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPS--GSDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~-~~~~~l~~h~~~I~~i~~s~--~~~~l~s~s~dg~v~iwd~~ 180 (393)
..|...|.+++|+++ .+++|+.|++|+|||+.++. ..+..+.+|...|++++|++ ++++|+||+.|++|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 457889999999976 46689999999999998762 35778999999999999976 48999999999999999998
Q ss_pred CCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC----EEEEEeCCCcEEEEEe
Q 016224 181 SGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND----LLFAGTQDGAILAWKF 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~----~l~~~~~dg~I~vwd~ 256 (393)
+++.... ..+.+|...|.+++|+|+ +|++++.|+.|++||+
T Consensus 90 ~~~~~~~-----------------------------------~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~ 134 (316)
T 3bg1_A 90 NGTWEKS-----------------------------------HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY 134 (316)
T ss_dssp SSCCCEE-----------------------------------EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE
T ss_pred CCcceEE-----------------------------------EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec
Confidence 7642111 134578889999999985 8999999999999999
Q ss_pred ccCCccccCceeecCceeeEEEEEEcC-------------------CEEEEecCCCcEEEeeCCCc---ceeeEeccCcc
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVVGA-------------------NKLYSGSMDNSIRVWNLETL---QCIQTLTEHTS 314 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~-------------------~~l~sg~~dg~i~iwd~~~~---~~~~~~~~~~~ 314 (393)
+.... ......+.+|...|.+++|++ .+|++|+.|++|++||++.. +++.++.+|..
T Consensus 135 ~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~ 213 (316)
T 3bg1_A 135 TGEGQ-WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD 213 (316)
T ss_dssp CSSSC-EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS
T ss_pred CCCCC-cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC
Confidence 86521 122345567888888888864 47999999999999999754 46788899999
Q ss_pred ceEEEEEcC------CEEEEEeCCCcEEEEEcCCCc----ceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEE
Q 016224 315 VVMSLLCWD------QFLLSCSLDKTIKVWFATDSG----NLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRF 384 (393)
Q Consensus 315 ~v~~l~~~~------~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~i 384 (393)
.|.+++|++ .+|++++.|++|+||++.+.. ....+..+ ...+.+++|+|++. +|++++.|+.|+|
T Consensus 214 ~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~---~las~~~D~~v~l 288 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF--NDVVWHVSWSITAN---ILAVSGGDNKVTL 288 (316)
T ss_dssp CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC--SSCEEEEEECTTTC---CEEEEESSSCEEE
T ss_pred ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC--CCcEEEEEEcCCCC---EEEEEcCCCeEEE
Confidence 999999984 589999999999999987621 12233333 45699999998766 8999999999999
Q ss_pred EeCC
Q 016224 385 YDLP 388 (393)
Q Consensus 385 wd~~ 388 (393)
|++.
T Consensus 289 w~~~ 292 (316)
T 3bg1_A 289 WKES 292 (316)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9975
No 55
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.1e-32 Score=253.69 Aligned_cols=231 Identities=23% Similarity=0.424 Sum_probs=198.3
Q ss_pred ceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 111 DILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
.|.+++|++++ +++|+.|+.|++||+.++ +.+..+.+|...|++++|+|++++|++++.|++|++||+.++++...+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 58999999874 667999999999999998 889999999999999999999999999999999999999999999888
Q ss_pred ecCCceEEEE--e-CCCEEEEE-cCCeEEEEECCCCcee-ee-------cCCCCcEEEEEEeCC--EEEEEeCCCcEEEE
Q 016224 189 NLGGEVGCMI--S-EGPWIFIG-VTNFVKAWNTQTNTDL-SL-------SGPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (393)
Q Consensus 189 ~~~~~~~~~~--~-~~~~l~~~-~~~~i~v~d~~~~~~~-~~-------~~~~~~v~~l~~~~~--~l~~~~~dg~I~vw 254 (393)
.....+..+. + ++.+++++ .|+.|++||++++..+ .+ .+|...|.+++|+++ +|++++.|+.|++|
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 8777665544 3 67777775 7899999999998765 33 578899999999988 99999999999999
Q ss_pred EeccCCcc--------ccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--
Q 016224 255 KFNVTTNC--------FEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW-- 322 (393)
Q Consensus 255 d~~~~~~~--------~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-- 322 (393)
|++..... ......+.+|...|.+++++ +.+|++|+.|+.|++||+++++++..+.+|...|.++++.
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCC
Confidence 99764321 12334567899999999986 5699999999999999999999999999999999999986
Q ss_pred ------CCEEEEEeCCCcEEEEEcCC
Q 016224 323 ------DQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 323 ------~~~l~s~s~dg~i~iwd~~~ 342 (393)
+++|++|+.|++|+||++..
T Consensus 364 ~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 364 SSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCcCCCCCEEEEECCCCcEEECcccc
Confidence 35899999999999999854
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-33 Score=262.62 Aligned_cols=278 Identities=14% Similarity=0.104 Sum_probs=203.7
Q ss_pred eecceEEeeEecCc--EEEecCCCeEEEEECCCCc-EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe-
Q 016224 108 IKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ- 183 (393)
Q Consensus 108 ~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~-~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~- 183 (393)
+..+|+|++|++++ +++|+.|+.|++||+.++. +.+..+.+|...|++++|+|++++|++++.|++|++||+.+++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 45689999999774 5568899999999998763 6777889999999999999999999999999999999999877
Q ss_pred --EEEEE-ecCCceEEEE--eCCCEEEEE-cCCeEEEEECCCCce----eeecC-CCCcEEEEEEeCC--EEEEEeCCCc
Q 016224 184 --CAGVI-NLGGEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTD----LSLSG-PVGQVYAMAVGND--LLFAGTQDGA 250 (393)
Q Consensus 184 --~~~~~-~~~~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~----~~~~~-~~~~v~~l~~~~~--~l~~~~~dg~ 250 (393)
....+ .+...+.++. +++.+++++ .|+.|++||+++++. ..+.. |...|.+++|+|+ +|++++.|+.
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 34333 3444555554 466666655 789999999998873 36666 9999999999998 9999999999
Q ss_pred EEEEEeccCCc--------------cccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcce----eeEec
Q 016224 251 ILAWKFNVTTN--------------CFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQC----IQTLT 310 (393)
Q Consensus 251 I~vwd~~~~~~--------------~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~----~~~~~ 310 (393)
|++||+..... ..++...+ .|...|.+++|+ +++|++++.|+.|++||+++++. +..+.
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence 99999964321 01233444 788999999996 56899999999999999999988 88899
Q ss_pred cCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCc-c--------------------------e---------EEEEe-
Q 016224 311 EHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSG-N--------------------------L---------EVTYT- 351 (393)
Q Consensus 311 ~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~-~--------------------------~---------~~~~~- 351 (393)
.|...|.+++|+ +++|++++.++.+ +|+..... . . ..+..
T Consensus 249 ~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (377)
T 3dwl_C 249 LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNM 327 (377)
T ss_dssp CSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------------
T ss_pred CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccch
Confidence 999999999998 5677777655555 77664221 0 0 00000
Q ss_pred -------------ecCCccEEEEEeeeCCCC-CcEEEEEeCCCeEEEEeC
Q 016224 352 -------------HNEEHGVLALCGMPDSEG-KPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 352 -------------~~~~~~v~~~~~~~~~~~-~~~l~s~s~dg~I~iwd~ 387 (393)
..+...+.++.+.+.... ...|+|++.||.|++||+
T Consensus 328 ~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 328 DLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred hhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 013456888887664321 125999999999999996
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.1e-31 Score=254.01 Aligned_cols=269 Identities=19% Similarity=0.313 Sum_probs=220.2
Q ss_pred ceeecceEEeeEecC-cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEec--CCCCEEEEEeCCCcEEEEECCCC
Q 016224 106 AVIKTDILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLP--SGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s--~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
..|...|.|++|+++ .+++|+.||+|++||+.++ +.+..+.+|...|.+++|+ +++++|++++.|++|++||+.++
T Consensus 159 ~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKG-CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp CCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCC
T ss_pred eCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCC-cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCC
Confidence 457889999999977 5668999999999999998 8899999999999999998 57899999999999999999887
Q ss_pred eEE-----------------------EEEe-cCCceEEEEeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEE
Q 016224 183 QCA-----------------------GVIN-LGGEVGCMISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMA 236 (393)
Q Consensus 183 ~~~-----------------------~~~~-~~~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~ 236 (393)
+.. ..+. +...+.++.+++.+++++ .|+.|++||+.+++.+ .+.+|...|.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 317 (464)
T 3v7d_B 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTI 317 (464)
T ss_dssp CCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred cccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEE
Confidence 532 2232 234456667778877776 7899999999998877 7788999999999
Q ss_pred EeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCcc
Q 016224 237 VGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTS 314 (393)
Q Consensus 237 ~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 314 (393)
|+++ +|++++.||.|++||++++ +.+..+.+|...|.++.+++++|++++.||.|++||+++++....+. +..
T Consensus 318 ~~~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~ 392 (464)
T 3v7d_B 318 YDHERKRCISASMDTTIRIWDLENG----ELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH-HTN 392 (464)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE-CTT
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCC----cEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec-CCC
Confidence 9987 9999999999999999886 56778889999999999999999999999999999999987766654 333
Q ss_pred ce--EEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 315 VV--MSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 315 ~v--~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
.+ .++..++++|++++ |+.|++||+.+++.+.... ..+...+.+++|+ ++.++++++.||.+.+|-
T Consensus 393 ~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~-~~~~~~v~~v~~~----~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 393 LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANI-LKDADQIWSVNFK----GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCT-TTTCSEEEEEEEE----TTEEEEEEEETTEEEEEE
T ss_pred CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhh-ccCCCcEEEEEec----CCEEEEEEEeCCeEEEEE
Confidence 44 44445588999988 9999999999887655422 2335568899885 333667777787766554
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.5e-32 Score=254.28 Aligned_cols=274 Identities=16% Similarity=0.275 Sum_probs=214.6
Q ss_pred eEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 112 ILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 112 i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
+.+..|+++ .+++|+.|+.|++||+.++ +....+.+|...|++++|+|++++|++++.|++|++||+.+++.+..+.
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFN-LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSC-EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCc-ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc
Confidence 344456654 4668999999999999988 8888889999999999999999999999999999999999999888887
Q ss_pred cC-CceEE--EEeCCCEEEEE-cCCeEEEEECCCCcee-eec---CCCCcEEEEEE---------------------eCC
Q 016224 190 LG-GEVGC--MISEGPWIFIG-VTNFVKAWNTQTNTDL-SLS---GPVGQVYAMAV---------------------GND 240 (393)
Q Consensus 190 ~~-~~~~~--~~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~---~~~~~v~~l~~---------------------~~~ 240 (393)
.+ ..+.+ +.+++.+++++ .|+.|++||+++++.. .+. .+...|.++.+ +++
T Consensus 179 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 258 (420)
T 3vl1_A 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY 258 (420)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC
Confidence 54 44444 34678877765 7899999999998876 333 34555666655 555
Q ss_pred --EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCC---EEEEecCCCcEEEeeCCCcce-eeEecc-Cc
Q 016224 241 --LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGAN---KLYSGSMDNSIRVWNLETLQC-IQTLTE-HT 313 (393)
Q Consensus 241 --~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~l~sg~~dg~i~iwd~~~~~~-~~~~~~-~~ 313 (393)
+|++++.||.|++||++... ........|...|.+++|+++ +|++++.||.|++||+++++. +..+.. |.
T Consensus 259 ~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~ 335 (420)
T 3vl1_A 259 GKYVIAGHVSGVITVHNVFSKE---QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG 335 (420)
T ss_dssp TEEEEEEETTSCEEEEETTTCC---EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT
T ss_pred CCEEEEEcCCCeEEEEECCCCc---eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC
Confidence 89999999999999998764 222333468889999999743 899999999999999998754 777776 67
Q ss_pred cceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEE-------EeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEE
Q 016224 314 SVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVT-------YTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFY 385 (393)
Q Consensus 314 ~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iw 385 (393)
..+.++.+. +++|++++.|+.|++|++........+ ........+..++|+|++...-.|++.+.+|.+.+|
T Consensus 336 ~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~ 415 (420)
T 3vl1_A 336 TPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALY 415 (420)
T ss_dssp SCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEE
T ss_pred CCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEE
Confidence 788888776 669999999999999999764322111 112233458899999986644457777789999999
Q ss_pred eCCc
Q 016224 386 DLPS 389 (393)
Q Consensus 386 d~~s 389 (393)
+++.
T Consensus 416 ~~~~ 419 (420)
T 3vl1_A 416 NLSN 419 (420)
T ss_dssp ESCC
T ss_pred eccC
Confidence 9875
No 59
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-31 Score=244.39 Aligned_cols=244 Identities=19% Similarity=0.271 Sum_probs=190.9
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC--eEEEEEe---cCCceEEE--EeCCCEEEEE-cCCeE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG--QCAGVIN---LGGEVGCM--ISEGPWIFIG-VTNFV 212 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~--~~~~~~~---~~~~~~~~--~~~~~~l~~~-~~~~i 212 (393)
+++.++++|...|.+++|+++ +|++|+.|++|++||+.++ +.+..+. +...+.++ .+++.+|+++ .|+.|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 678899999999999999987 9999999999999999875 4555552 33445444 3678888776 78999
Q ss_pred EEEECCCC-------cee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc
Q 016224 213 KAWNTQTN-------TDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG 282 (393)
Q Consensus 213 ~v~d~~~~-------~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 282 (393)
++|++... +.. .+.+|...|.+++|+|+ +|++++.|++|++||++......+.+..+.+|...|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 99998532 222 67889999999999998 999999999999999965433335567788999999999996
Q ss_pred --CCEEEEecCCCcEEEeeCCCc--ceeeEeccCccceEEEEEcC----CEEEEEeCCCcEEEEEcCCCcc-------eE
Q 016224 283 --ANKLYSGSMDNSIRVWNLETL--QCIQTLTEHTSVVMSLLCWD----QFLLSCSLDKTIKVWFATDSGN-------LE 347 (393)
Q Consensus 283 --~~~l~sg~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~----~~l~s~s~dg~i~iwd~~~~~~-------~~ 347 (393)
+++|++++.|++|++||+.++ +++..+.+|...|.++.|++ .+|++++.|++|++||+..... ..
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 569999999999999998766 67889999999999999984 3799999999999999864321 11
Q ss_pred EEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 348 VTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 348 ~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
......+...+.+++|++.. +|++++.||.|++|++.++
T Consensus 243 ~~~~~~h~~~v~~v~~s~~~----~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 243 AILPDVHKRQVYNVAWGFNG----LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EECCSCCSSCEEEEEECTTS----CEEEEETTSCEEEEEEETT
T ss_pred eecccccccceEEEEEcCCC----EEEEEeCCCEEEEEEcCCC
Confidence 11111234569999998432 6999999999999998765
No 60
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-31 Score=244.63 Aligned_cols=247 Identities=21% Similarity=0.323 Sum_probs=199.2
Q ss_pred CcEEEEEecCCcC-CEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEE--E-e-cCCceEEE--EeCCCEEEEE-cCC
Q 016224 139 GFKLLTQLEGHQK-VVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGV--I-N-LGGEVGCM--ISEGPWIFIG-VTN 210 (393)
Q Consensus 139 ~~~~~~~l~~h~~-~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~--~-~-~~~~~~~~--~~~~~~l~~~-~~~ 210 (393)
..+++.++.+|.. .|.+++|+|++++||+|+.|++|+|||+.+++.... + . +...+.++ .+++.+|+++ .|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3478889999988 999999999999999999999999999988864432 2 1 23445444 3678888876 789
Q ss_pred eEEEEECCCCce---eeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--C
Q 016224 211 FVKAWNTQTNTD---LSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--A 283 (393)
Q Consensus 211 ~i~v~d~~~~~~---~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~ 283 (393)
.|++|+...+.. ..+.+|...|.+++|+|+ +|++++.|+.|++||+..... ......+..|...|.+++|+ +
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC-EEEEEEECCCCSCEEEEEECSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC-eEEEEEecCcCCCeEEEEECCCC
Confidence 999999987643 377899999999999988 999999999999999987532 23456678899999999986 5
Q ss_pred CEEEEecCCCcEEEeeCCCcc--eeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcce------------E
Q 016224 284 NKLYSGSMDNSIRVWNLETLQ--CIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNL------------E 347 (393)
Q Consensus 284 ~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~------------~ 347 (393)
++|++++.|++|++||+++++ +..++.+|...|.+++|+ +++|++++.|++|+|||....... .
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 689999999999999998765 457889999999999998 679999999999999997432210 1
Q ss_pred E--EEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 348 V--TYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 348 ~--~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
. .....+...+.+++|+++.. .|++++.|+.|++|++..
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~---~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTG---ALATACGDDAIRVFQEDP 283 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTC---CEEEEETTSCEEEEEECT
T ss_pred eeEEecCCCCCcEEEEEEecCCC---EEEEEeCCCeEEEEEeCC
Confidence 1 11112345699999988766 899999999999999764
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9e-32 Score=254.10 Aligned_cols=267 Identities=12% Similarity=0.112 Sum_probs=211.6
Q ss_pred eEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 112 ILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 112 i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
+++++|+++ .+++|+.|+.|++||+.++ +....+..| ..+....|++++++|++++.||.|++||+.+++....+.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIR-DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSE-ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEeccc-ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 456778765 5778999999999999876 555555555 445555789999999999999999999999998887764
Q ss_pred -cCCceEEEE--eCCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCcc
Q 016224 190 -LGGEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNC 262 (393)
Q Consensus 190 -~~~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~ 262 (393)
+...+.++. +++.+|+++ .|+.|++||+.+++.. .+.+|...|.+++|+|+ +|++++.|+.|++||++++.
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-- 214 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-- 214 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc--
Confidence 445555543 577777765 7889999999988766 77889999999999988 89999999999999998763
Q ss_pred ccCceeec---CceeeEEEEEE-----------------------cCCEEEEecCCCcEEEeeCCCcceeeEec-cCccc
Q 016224 263 FEPAASLK---GHSLAVVSLVV-----------------------GANKLYSGSMDNSIRVWNLETLQCIQTLT-EHTSV 315 (393)
Q Consensus 263 ~~~~~~~~---~~~~~v~~l~~-----------------------~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~~ 315 (393)
....+. .+...+.++.+ ++++|++++.||.|++||+++++.+..+. .|...
T Consensus 215 --~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 215 --TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp --EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred --eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 333443 34555665554 35689999999999999999998877775 47889
Q ss_pred eEEEEEc--CC-EEEEEeCCCcEEEEEcCCCcc-eEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 316 VMSLLCW--DQ-FLLSCSLDKTIKVWFATDSGN-LEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 316 v~~l~~~--~~-~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
|.+++|+ +. +|++++.||.|++||+++.+. +..+..+. ...+..+. .+++. +|++++.|+.|++|++.+
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~-~~~~~---~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE-GTPINNVY-FAAGA---LFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST-TSCEEEEE-EETTE---EEEEETTTEEEEEEEECC
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC-CCCceEEE-eCCCC---EEEEecCCccEEEEeccC
Confidence 9999998 44 999999999999999998765 45554433 33566664 44433 899999999999999875
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=259.38 Aligned_cols=275 Identities=13% Similarity=0.212 Sum_probs=223.0
Q ss_pred eecceEEeeEecCc---EEEe----------cCCCeEEEEECCCCc--EEEEEecCCcCCEEEEEecCCCCEEEEEeCCC
Q 016224 108 IKTDILCRNWVQGN---CMYG----------EKCKFLHSWTVGDGF--KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE 172 (393)
Q Consensus 108 ~~~~i~c~~~~~~~---~~~g----------~~dg~i~vwd~~~~~--~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg 172 (393)
+...|.|++|++++ +++| +.|+.|++||+.++. +.+..+ .|...|++++|+|++++|++++.||
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 34578999999873 4457 789999999998762 133333 5899999999999999999999999
Q ss_pred cEEEEECCC----CeEEEEEecC-CceEEE--EeC-CCEEEEE-cCCeEEEEECCCCc------ee----eecCCCCcEE
Q 016224 173 TVRVWDCAS----GQCAGVINLG-GEVGCM--ISE-GPWIFIG-VTNFVKAWNTQTNT------DL----SLSGPVGQVY 233 (393)
Q Consensus 173 ~v~iwd~~~----~~~~~~~~~~-~~~~~~--~~~-~~~l~~~-~~~~i~v~d~~~~~------~~----~~~~~~~~v~ 233 (393)
.|++||+.+ .+.+..+..+ ..+.++ .++ +.+++++ .|+.|++||+.+++ .. ....|...|.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 3466666543 344443 344 6777766 78899999999876 22 2367889999
Q ss_pred EEEEeCC---EEEEEeCCCcEEEEEeccCCccccCceeecCc------eeeEEEEEEcC---CEEEEecCCC---cEEEe
Q 016224 234 AMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPAASLKGH------SLAVVSLVVGA---NKLYSGSMDN---SIRVW 298 (393)
Q Consensus 234 ~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~------~~~v~~l~~~~---~~l~sg~~dg---~i~iw 298 (393)
+++|+++ +|++++.|+.|++||++.. +....+..+ ...+.+++|++ .+|++++.|+ .|++|
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAK----KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTT----EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCC----CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 9999986 8999999999999999886 334444444 78899999974 4899999998 99999
Q ss_pred eCCCc-ceeeEec-cCccceEEEEEc---CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEE
Q 016224 299 NLETL-QCIQTLT-EHTSVVMSLLCW---DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVL 373 (393)
Q Consensus 299 d~~~~-~~~~~~~-~~~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 373 (393)
|++++ +++..+. +|...|.+++|+ +++|++++.|+.|++||+.+.+.+..+..|.. .+.+++|+|+.+ .+|
T Consensus 246 d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~v~~~~~s~~~~--~~l 321 (416)
T 2pm9_A 246 DLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN--WCFKTKFAPEAP--DLF 321 (416)
T ss_dssp ETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS--CCCCEEECTTCT--TEE
T ss_pred eCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC--ceEEEEECCCCC--CEE
Confidence 99986 6788888 899999999996 56999999999999999998888777776654 488899988752 399
Q ss_pred EEEeCCCeEEEEeCCcee
Q 016224 374 LCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 374 ~s~s~dg~I~iwd~~s~~ 391 (393)
++++.|+.|++|++.+++
T Consensus 322 ~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EECCSSSEEEEEESCCCC
T ss_pred EEEecCCcEEEEEccCCC
Confidence 999999999999998764
No 63
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.4e-31 Score=241.69 Aligned_cols=242 Identities=20% Similarity=0.268 Sum_probs=192.7
Q ss_pred EEEEEecCCcCCEEEEEe-----cC-CCCEEEEEeCCCcEEEEECCCC-------eEEEEEecC-CceEEE--EeCCCEE
Q 016224 141 KLLTQLEGHQKVVSGITL-----PS-GSDKLYSGSKDETVRVWDCASG-------QCAGVINLG-GEVGCM--ISEGPWI 204 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~-----s~-~~~~l~s~s~dg~v~iwd~~~~-------~~~~~~~~~-~~~~~~--~~~~~~l 204 (393)
++...+++|...|++++| ++ ++++|+||+.|++|++||+.+. .....+..+ ..+.++ .+++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 567789999999999999 66 8999999999999999998753 344555544 344443 3577887
Q ss_pred EEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEE
Q 016224 205 FIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLV 280 (393)
Q Consensus 205 ~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~ 280 (393)
+++ .|+.|++||+++++.+ .+.+|...|.+++|+|+ +|++++.|+.|++||+..... ........|...|.++.
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK--FSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE--EECCTTTSCSSCEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce--eeeecccCCCceeeeee
Confidence 765 7899999999998876 78899999999999988 999999999999999874311 11122336888899999
Q ss_pred EcC------------CEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcce
Q 016224 281 VGA------------NKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNL 346 (393)
Q Consensus 281 ~~~------------~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~ 346 (393)
+++ .+|++++.|+.|++|| .+.+....+.+|...|.+++|+ +++|++++.|+.|++||+......
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 864 5799999999999999 4567788899999999999998 679999999999999999554433
Q ss_pred EEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 347 EVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 347 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
.....+ ...+.+++|+|+.. +|+ ++.|+.|++|++.+++
T Consensus 249 ~~~~~~--~~~v~~v~~sp~~~---~la-~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 249 QREFDA--GSTINQIAFNPKLQ---WVA-VGTDQGVKIFNLMTQS 287 (343)
T ss_dssp SEEEEC--SSCEEEEEECSSSC---EEE-EEESSCEEEEESSSCC
T ss_pred ceeecC--CCcEEEEEECCCCC---EEE-EECCCCEEEEEeCCCC
Confidence 333323 23589999998755 565 5568889999997653
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=266.25 Aligned_cols=262 Identities=10% Similarity=0.026 Sum_probs=195.8
Q ss_pred EecCCCeEEEEECCCCcE---EEEEecCCcCCEEEEEecCC------CCEEEEEeCCCcEEEEECCCCeEE---------
Q 016224 124 YGEKCKFLHSWTVGDGFK---LLTQLEGHQKVVSGITLPSG------SDKLYSGSKDETVRVWDCASGQCA--------- 185 (393)
Q Consensus 124 ~g~~dg~i~vwd~~~~~~---~~~~l~~h~~~I~~i~~s~~------~~~l~s~s~dg~v~iwd~~~~~~~--------- 185 (393)
+++.|++|+|||+.++.. ...++.+|.+.|.+|+|+|+ +.+||+++.||+|+|||+.+++..
T Consensus 178 S~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~ 257 (524)
T 2j04_B 178 KEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEK 257 (524)
T ss_dssp ----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCS
T ss_pred cCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecC
Confidence 466889999999976621 23456778899999999986 579999999999999999876421
Q ss_pred --EEEecC-CceEEEE-eCCCEEEEE-cCCeEEEEECCCCcee--eecCCCCcEEEE--EEeC---CEEEEEeCCCcEEE
Q 016224 186 --GVINLG-GEVGCMI-SEGPWIFIG-VTNFVKAWNTQTNTDL--SLSGPVGQVYAM--AVGN---DLLFAGTQDGAILA 253 (393)
Q Consensus 186 --~~~~~~-~~~~~~~-~~~~~l~~~-~~~~i~v~d~~~~~~~--~~~~~~~~v~~l--~~~~---~~l~~~~~dg~I~v 253 (393)
..+..+ ..+.++. ..+..|++| .|++|++||++++... .+..|...|.++ .|++ .+|++++.|++|++
T Consensus 258 p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl 337 (524)
T 2j04_B 258 PSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI 337 (524)
T ss_dssp CSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred ceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence 233322 3455544 234456655 8899999999976432 578999999999 4565 38999999999999
Q ss_pred EEeccCCccccCceeecCcee--eEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEE
Q 016224 254 WKFNVTTNCFEPAASLKGHSL--AVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLL 327 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~--~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~ 327 (393)
||+++. +....+.+|.. .|.+++|+ +..|++++.|++|++||++++.++.++.+|...|++++|+ +++|+
T Consensus 338 WD~~~~----~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~ 413 (524)
T 2j04_B 338 FNPKDI----ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVL 413 (524)
T ss_dssp ECGGGH----HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCE
T ss_pred EECCCC----CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEE
Confidence 999876 33334444432 46667776 4589999999999999999999999999999999999999 67899
Q ss_pred EEeCCCcEEEEEcCCCc--------------ceEEE----------------------------EeecCCccEEEEEeee
Q 016224 328 SCSLDKTIKVWFATDSG--------------NLEVT----------------------------YTHNEEHGVLALCGMP 365 (393)
Q Consensus 328 s~s~dg~i~iwd~~~~~--------------~~~~~----------------------------~~~~~~~~v~~~~~~~ 365 (393)
+|+.|++|+|||+.... .+..+ ....+...|.+++|+|
T Consensus 414 Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp 493 (524)
T 2j04_B 414 AGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNE 493 (524)
T ss_dssp EEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECC
T ss_pred EEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCC
Confidence 99999999999863210 00000 0011234588899999
Q ss_pred CCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 366 DSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 366 ~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+.+.+.+|++|+.||.|+||++.-
T Consensus 494 ~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 494 TSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp STTTTTEEEEECTTSEEEEEECSC
T ss_pred CCCccHHHHhhccCceEEEEEccc
Confidence 877667999999999999999863
No 65
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=253.16 Aligned_cols=277 Identities=9% Similarity=0.172 Sum_probs=215.2
Q ss_pred cceeecceEEeeEecCc--EEEecCCCeEEEEECCCCc----------EEEEEecCCc------------CCEEEEEecC
Q 016224 105 RAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGF----------KLLTQLEGHQ------------KVVSGITLPS 160 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~----------~~~~~l~~h~------------~~I~~i~~s~ 160 (393)
..++...|+|++|++++ +++|+.||.|+|||+.++. +....+++|. ..|++++|+|
T Consensus 24 ~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 24 DVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 45667899999999874 5679999999999998762 2688999998 8899999999
Q ss_pred CC--CEEEEEeCCCcEEEEECCCCeEEE---------------------------------------EEe--cCCceE--
Q 016224 161 GS--DKLYSGSKDETVRVWDCASGQCAG---------------------------------------VIN--LGGEVG-- 195 (393)
Q Consensus 161 ~~--~~l~s~s~dg~v~iwd~~~~~~~~---------------------------------------~~~--~~~~~~-- 195 (393)
++ .+|++++.|++|++||+.+++... .+. +...+.
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 799999999999999997654421 121 223333
Q ss_pred EEEeCCCEEEEEcCCeEEEEECCC-Cceee--------ecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEeccCCccc
Q 016224 196 CMISEGPWIFIGVTNFVKAWNTQT-NTDLS--------LSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNCF 263 (393)
Q Consensus 196 ~~~~~~~~l~~~~~~~i~v~d~~~-~~~~~--------~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~ 263 (393)
.+.+++.+++++.|+.|++||+.. +..+. +..|...|.+++|+|+ +|++++.||.|++||++......
T Consensus 184 ~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 184 SINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp EECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 344688999988899999999994 33333 5588999999999985 89999999999999999875333
Q ss_pred cCceeecCcee------------eEEEEEEc--CCEEEEecCCCcEEEeeCCC-cceeeEeccCccce------------
Q 016224 264 EPAASLKGHSL------------AVVSLVVG--ANKLYSGSMDNSIRVWNLET-LQCIQTLTEHTSVV------------ 316 (393)
Q Consensus 264 ~~~~~~~~~~~------------~v~~l~~~--~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~v------------ 316 (393)
.....+..|.. .|.+++|+ +.+|++++. +.|++||+++ ++++..+..|...+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 33567777765 89999997 568999988 9999999997 88999998886432
Q ss_pred ---EEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEee-------------------------------cCCccEEE
Q 016224 317 ---MSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTH-------------------------------NEEHGVLA 360 (393)
Q Consensus 317 ---~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------------------------------~~~~~v~~ 360 (393)
..++|+ +++|++++.|+.|++||+.+++.+. +..+ .....+..
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 237777 6799999999999999998776542 2222 12245788
Q ss_pred EEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 361 LCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 361 ~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
++|+|+.. +|++++.++ +++|.-
T Consensus 422 ~~~~p~~~---~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 422 TAWHPKEN---IIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEECSSSS---EEEEECSSC-EEEEEC
T ss_pred EEECCCCC---EEEEEecce-eeeecc
Confidence 99999876 899888775 777764
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.8e-31 Score=240.92 Aligned_cols=266 Identities=12% Similarity=0.125 Sum_probs=215.7
Q ss_pred eeecceEEeeEecC--cEEEecCCCeEEEEECCCCc--EEEEEecCCcCCEEEEEecCCCC-EEEEEeCCCcEEEEEC-C
Q 016224 107 VIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGF--KLLTQLEGHQKVVSGITLPSGSD-KLYSGSKDETVRVWDC-A 180 (393)
Q Consensus 107 ~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~--~~~~~l~~h~~~I~~i~~s~~~~-~l~s~s~dg~v~iwd~-~ 180 (393)
.|...|+|++|+++ .+++++.|+.|++|++.++. .....+.+|...|++++|+|+++ +|++++.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 57789999999976 46689999999999998763 23455668999999999999999 9999999999999999 8
Q ss_pred CCeEEEEEe--cCCceEEEE--eCCCEEEE-EcCCeEEEEECCC---------CceeeecCCCCcEEEEEEeCCEEEEEe
Q 016224 181 SGQCAGVIN--LGGEVGCMI--SEGPWIFI-GVTNFVKAWNTQT---------NTDLSLSGPVGQVYAMAVGNDLLFAGT 246 (393)
Q Consensus 181 ~~~~~~~~~--~~~~~~~~~--~~~~~l~~-~~~~~i~v~d~~~---------~~~~~~~~~~~~v~~l~~~~~~l~~~~ 246 (393)
+++...... +...+.++. + +.++++ +.|+.|++||+++ ++.+....+...|.+++|+++.+++++
T Consensus 89 ~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 167 (342)
T 1yfq_A 89 SPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGM 167 (342)
T ss_dssp SSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEE
T ss_pred CCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEe
Confidence 877643333 445554443 4 666665 4889999999987 665544458899999999999999999
Q ss_pred CCCcEEEEEecc-CCccccCceeecCceeeEEEEEEcC---CEEEEecCCCcEEEeeCCCc------ceeeEeccCcc--
Q 016224 247 QDGAILAWKFNV-TTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGSMDNSIRVWNLETL------QCIQTLTEHTS-- 314 (393)
Q Consensus 247 ~dg~I~vwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~~dg~i~iwd~~~~------~~~~~~~~~~~-- 314 (393)
.|+.|++||++. ... ........|...+.++++++ ++|++++.||.|++||++.. +.+..+..|..
T Consensus 168 ~d~~i~i~d~~~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDD--NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp STTEEEEEESSCCTTC--CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred CCCeEEEEECCccccc--cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc
Confidence 999999999987 432 22334456778899998864 68999999999999999887 78888888865
Q ss_pred -------ceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCe
Q 016224 315 -------VVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNS 381 (393)
Q Consensus 315 -------~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~ 381 (393)
.|.+++|+ +++|++++.||.|++||+.+++.+..+..+. ...+.+++ |++. +|++++.||.
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~--~~~~---~l~s~s~Dg~ 315 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIA--CSDN---ILCLATSDDT 315 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SSEEEEEE--ECSS---EEEEEEECTH
T ss_pred cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhccc-CCCceEec--CCCC---eEEEEecCCc
Confidence 99999998 6789999999999999999887766655541 34577777 6555 9999999999
No 67
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-30 Score=265.54 Aligned_cols=277 Identities=17% Similarity=0.229 Sum_probs=230.7
Q ss_pred cceeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|...|.|++|++++ +++|+.||.|+|||+.++ +.+..+.+|...|++++|+|++++|++++.||.|++||+.++
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 87 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 45678899999999875 567889999999999998 889999999999999999999999999999999999999999
Q ss_pred eEEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCCCce-e-eecCCCCcEEEEEEeC-C--EEEEEeCCCcEEE
Q 016224 183 QCAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTD-L-SLSGPVGQVYAMAVGN-D--LLFAGTQDGAILA 253 (393)
Q Consensus 183 ~~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~-~-~~~~~~~~v~~l~~~~-~--~l~~~~~dg~I~v 253 (393)
+.+..+..+ ..+.++ .+++.+++++ .|+.|++|++.++.. . .+..|...|.+++|+| + .|++++.||.|++
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~v 167 (814)
T 3mkq_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (814)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 999888754 445443 3678777765 788999999998733 3 6778999999999998 4 8999999999999
Q ss_pred EEeccCCccccCceeecC-ceeeEEEEEE----cCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEE
Q 016224 254 WKFNVTTNCFEPAASLKG-HSLAVVSLVV----GANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFL 326 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~-~~~~v~~l~~----~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l 326 (393)
||+.... ....+.. +...+.++++ ++.+|++++.|+.|++||+++++.+.++..|...|.++.|+ +++|
T Consensus 168 wd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 243 (814)
T 3mkq_A 168 WSLGQST----PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII 243 (814)
T ss_dssp EETTCSS----CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EECCCCc----ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 9998763 3334433 3367777777 45699999999999999999999999999999999999998 5699
Q ss_pred EEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 327 LSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 327 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
++++.||.|++||+.+......+..+. ..+.+++|+|++. .++++.+.|+.+.+|++...
T Consensus 244 ~~~~~dg~v~vwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 244 ISGSEDGTLKIWNSSTYKVEKTLNVGL--ERSWCIATHPTGR--KNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCSS--SSEEEEEECTTCG--GGEEEEEETTEEEEEECSCC
T ss_pred EEEeCCCeEEEEECCCCcEEEEeecCC--CcEEEEEEccCCC--ceEEEEEeCCCEEEEEcCCC
Confidence 999999999999998887766665554 3589999988753 23355555778899987653
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.3e-30 Score=278.47 Aligned_cols=236 Identities=18% Similarity=0.273 Sum_probs=198.8
Q ss_pred cceeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 105 RAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
...|...|+|++|++++ +++|+.||+|++||+.++ +.+..+.+|...|++++|+|++++|++++.|++|++||+.++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG-EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC-CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 34578899999999874 567999999999999998 888999999999999999999999999999999999999999
Q ss_pred eEEEEEecCC-ceEEEE--e--CCCEEEEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEE
Q 016224 183 QCAGVINLGG-EVGCMI--S--EGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILA 253 (393)
Q Consensus 183 ~~~~~~~~~~-~~~~~~--~--~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~v 253 (393)
+.+..+..+. .+.++. + +..+++++ .|+.|++||+.+++.. .+.+|...|.+++|+|+ +|++++.||.|++
T Consensus 690 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~v 769 (1249)
T 3sfz_A 690 KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRL 769 (1249)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEE
T ss_pred ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEE
Confidence 9999887654 444443 3 34466655 7889999999999877 78899999999999998 9999999999999
Q ss_pred EEeccCCcccc--------------------------------------------------Cc-eeecCceeeEEEEEEc
Q 016224 254 WKFNVTTNCFE--------------------------------------------------PA-ASLKGHSLAVVSLVVG 282 (393)
Q Consensus 254 wd~~~~~~~~~--------------------------------------------------~~-~~~~~~~~~v~~l~~~ 282 (393)
||+........ .. ....+|...+.+++++
T Consensus 770 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s 849 (1249)
T 3sfz_A 770 WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS 849 (1249)
T ss_dssp EEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC
T ss_pred EeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc
Confidence 99876521100 00 0112566677777775
Q ss_pred --CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcC
Q 016224 283 --ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFAT 341 (393)
Q Consensus 283 --~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~ 341 (393)
+.++++++.|+.|++||+.+++.+..+.+|...|.++.|+ +++|++++.|+.|++||+.
T Consensus 850 p~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 850 PYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp SSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 5699999999999999999999999999999999999998 6799999999999999864
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.7e-30 Score=235.66 Aligned_cols=241 Identities=22% Similarity=0.320 Sum_probs=198.1
Q ss_pred EEEEEecCCcCCEEEEEecCC-CCEEEEEeCCCcEEEEECCCCe-----EEEEEecC-CceEEE--EeCCCEEEEE-cCC
Q 016224 141 KLLTQLEGHQKVVSGITLPSG-SDKLYSGSKDETVRVWDCASGQ-----CAGVINLG-GEVGCM--ISEGPWIFIG-VTN 210 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~-~~~l~s~s~dg~v~iwd~~~~~-----~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~ 210 (393)
++..+|++|.+.|++|+|+|+ +++|+||+.|++|+|||+.+.+ +...+..+ ..+.++ .+++.+++++ .|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 567789999999999999997 6899999999999999987653 34455443 344443 3678888765 889
Q ss_pred eEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc----C
Q 016224 211 FVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG----A 283 (393)
Q Consensus 211 ~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~ 283 (393)
.|++|+....... ....+...+..+.+.++ +|++++.|+.+++||+.... .......+|...+..+++. .
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC---KYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE---EEEECSSSCSSCEEEEEECSCSSS
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc---eEEEEeccccCcccceEEccCCCC
Confidence 9999999998877 66677788888888876 89999999999999987653 3344556788888888875 2
Q ss_pred CEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEE
Q 016224 284 NKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLAL 361 (393)
Q Consensus 284 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 361 (393)
.++++++.|+.|++||+++++++..+.+|...|.+++|+ +++|++++.|+.|++||+++.+.+..+.. ...+..+
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~ 262 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDIINAL 262 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC---SSCEEEE
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC---CceEEee
Confidence 478999999999999999999999999999999999998 67999999999999999988776655543 3358889
Q ss_pred EeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 362 CGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 362 ~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+|+|+.. +++++.|+.|++||++++.
T Consensus 263 ~~~~~~~----~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 263 CFSPNRY----WLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp EECSSSS----EEEEEETTEEEEEETTTTE
T ss_pred ecCCCCc----eeeccCCCEEEEEECCCCe
Confidence 9887643 6777789999999998764
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-31 Score=242.86 Aligned_cols=245 Identities=19% Similarity=0.209 Sum_probs=201.3
Q ss_pred cceeecceEEeeEecCc--EEEecCCCeEEEEECCCC-cEEEEEecCCcCCEEEEEecCC--CCEEEEEeCCCcEEEEEC
Q 016224 105 RAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPSG--SDKLYSGSKDETVRVWDC 179 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~-~~~~~~l~~h~~~I~~i~~s~~--~~~l~s~s~dg~v~iwd~ 179 (393)
...|..+|+|++|++++ +++|+.||.|++||+..+ .+.+..+.+|...|++++|+++ +++|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 44678899999999764 667889999999999732 2777889999999999999977 899999999999999999
Q ss_pred CCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC----EEEEEeCCCcEEEEE
Q 016224 180 ASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND----LLFAGTQDGAILAWK 255 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~----~l~~~~~dg~I~vwd 255 (393)
.+++.... ..+..|...|.+++|+++ +|++++.|+.|++||
T Consensus 87 ~~~~~~~~-----------------------------------~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 87 ENGRWSQI-----------------------------------AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp ETTEEEEE-----------------------------------EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCCceeEe-----------------------------------eeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence 88763221 134567889999999875 899999999999999
Q ss_pred eccCCccccCceeecCceeeEEEEEEcC---------------CEEEEecCCCcEEEeeCCCcc----eeeEeccCccce
Q 016224 256 FNVTTNCFEPAASLKGHSLAVVSLVVGA---------------NKLYSGSMDNSIRVWNLETLQ----CIQTLTEHTSVV 316 (393)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~---------------~~l~sg~~dg~i~iwd~~~~~----~~~~~~~~~~~v 316 (393)
++.... .....+..|...|.+++|++ .+|++++.|+.|++||+++++ .+..+..|...|
T Consensus 132 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 132 FKENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp CCTTSC--CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred cCCCCc--eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcE
Confidence 987643 33445677889999999864 589999999999999998754 556788899999
Q ss_pred EEEEEc-----CCEEEEEeCCCcEEEEEcCCCcce---EEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 317 MSLLCW-----DQFLLSCSLDKTIKVWFATDSGNL---EVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 317 ~~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
.+++|+ +.+|++++.|+.|++||+.+.... ...........+.+++|+|++. +|++++.||.|++|++.
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC---CEEEEESSSSEEEEEEE
T ss_pred eEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC---EEEEecCCCcEEEEeCC
Confidence 999998 358999999999999999876532 2222223455699999998876 89999999999999987
Q ss_pred c
Q 016224 389 S 389 (393)
Q Consensus 389 s 389 (393)
+
T Consensus 287 ~ 287 (379)
T 3jrp_A 287 L 287 (379)
T ss_dssp E
T ss_pred C
Confidence 3
No 71
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.5e-30 Score=238.15 Aligned_cols=254 Identities=15% Similarity=0.104 Sum_probs=199.2
Q ss_pred ccceeecceEEeeEecCc--EEEecCCCeEEEEECCCCc---EEEEEecCCcCCEEEEEecC--CCCEEEEEeCCCcEEE
Q 016224 104 NRAVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGF---KLLTQLEGHQKVVSGITLPS--GSDKLYSGSKDETVRV 176 (393)
Q Consensus 104 ~~~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~---~~~~~l~~h~~~I~~i~~s~--~~~~l~s~s~dg~v~i 176 (393)
....|...|+|++|++++ +++|+.||.|++||+.++. +.+..+.+|...|++++|+| ++++|++++.||+|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 345688899999999774 6689999999999998652 57788899999999999999 6999999999999999
Q ss_pred EECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCC-CceeeecCCCCcEEEEEEeCC----EEEEEeCCCcE
Q 016224 177 WDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQT-NTDLSLSGPVGQVYAMAVGND----LLFAGTQDGAI 251 (393)
Q Consensus 177 wd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~-~~~~~~~~~~~~v~~l~~~~~----~l~~~~~dg~I 251 (393)
||+.+++..... .. .....+..|...|.+++|+++ +|++++.|+.|
T Consensus 86 wd~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v 136 (351)
T 3f3f_A 86 WEEDPDQEECSG-----------------------------RRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGIL 136 (351)
T ss_dssp EEECTTSCTTSS-----------------------------CSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEE
T ss_pred EecCCCcccccc-----------------------------cCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcE
Confidence 999876421000 00 001245678899999999874 89999999999
Q ss_pred EEEEeccCCccccCc---------eeecCceeeEEEEEEc-----CCEEEEecCCCcEEEeeCCCcce--eeEeccCccc
Q 016224 252 LAWKFNVTTNCFEPA---------ASLKGHSLAVVSLVVG-----ANKLYSGSMDNSIRVWNLETLQC--IQTLTEHTSV 315 (393)
Q Consensus 252 ~vwd~~~~~~~~~~~---------~~~~~~~~~v~~l~~~-----~~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~~ 315 (393)
++||++......... .....|...+.++.++ +++|++++.|+.+.+|+...++. +..+.+|...
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 999998764321111 1112567788888885 56899999999999998887765 7788899999
Q ss_pred eEEEEEc--C----CEEEEEeCCCcEEEEEcCCCc---------------------------------------------
Q 016224 316 VMSLLCW--D----QFLLSCSLDKTIKVWFATDSG--------------------------------------------- 344 (393)
Q Consensus 316 v~~l~~~--~----~~l~s~s~dg~i~iwd~~~~~--------------------------------------------- 344 (393)
|.+++|+ + ++|++++.|+.|++||+++..
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 9999999 3 589999999999999997642
Q ss_pred -ceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 345 -NLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 345 -~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
.+..+. .+...+.+++|+|++. +|++++.||.|++|++.+++
T Consensus 297 ~~~~~~~--~h~~~v~~~~~s~~~~---~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 297 ELLSEHD--DHNGEVWSVSWNLTGT---ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEEEC--TTSSCEEEEEECSSSC---CEEEEETTSCEEEEEECTTS
T ss_pred cEEEEEe--cccccEEEEEEcCCCC---EEEEecCCCcEEEEecCcCc
Confidence 122222 2345699999998765 89999999999999998753
No 72
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-30 Score=237.40 Aligned_cols=273 Identities=18% Similarity=0.285 Sum_probs=219.0
Q ss_pred eeecceEEeeEecCcEE--EecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeE
Q 016224 107 VIKTDILCRNWVQGNCM--YGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC 184 (393)
Q Consensus 107 ~~~~~i~c~~~~~~~~~--~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 184 (393)
.+..++.+++|++++.. ++..++.+.+|......+.+. ..+|...|++++|+|++++|++++ ||.|++||+.+++.
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~ 84 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQIN-TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN 84 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEE-EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccce-eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc
Confidence 35568999999988544 455666677776665534444 447999999999999999999999 99999999987642
Q ss_pred ---EEEEe---cCCceEEE--EeCCCEEEEE-cCCeEEEEECCCCce---eeecCCCCcEEEEEEeCC--EEEEEeCCCc
Q 016224 185 ---AGVIN---LGGEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTD---LSLSGPVGQVYAMAVGND--LLFAGTQDGA 250 (393)
Q Consensus 185 ---~~~~~---~~~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~---~~~~~~~~~v~~l~~~~~--~l~~~~~dg~ 250 (393)
+..+. +...+.++ .+++++++++ .++.|++||+.+++. ..+..|...|.+++|+++ +|++++.|+.
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 164 (337)
T 1gxr_A 85 KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164 (337)
T ss_dssp CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCc
Confidence 33332 33445444 3577777765 788999999998872 267789999999999987 8999999999
Q ss_pred EEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEE
Q 016224 251 ILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFL 326 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l 326 (393)
|++||+++. +....+..|...+.+++++ +++|++++.|+.|++||+++++.+..+. +...+.++.|+ +++|
T Consensus 165 v~~~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 165 IAVWDLHNQ----TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp EEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEE
T ss_pred EEEEeCCCC----ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEE
Confidence 999999876 5567778899999999996 5699999999999999999999888875 67789999997 6799
Q ss_pred EEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 327 LSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 327 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
++++.|+.|++||+.+.+. ..+.. +...+..+.|+|++. +|++++.||.|++||+++++.
T Consensus 240 ~~~~~~~~i~~~~~~~~~~-~~~~~--~~~~v~~~~~~~~~~---~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 240 AVGMESSNVEVLHVNKPDK-YQLHL--HESCVLSLKFAYCGK---WFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEEETTSCEEEEETTSSCE-EEECC--CSSCEEEEEECTTSS---EEEEEETTSEEEEEETTTCCE
T ss_pred EEEcCCCcEEEEECCCCCe-EEEcC--CccceeEEEECCCCC---EEEEecCCCcEEEEECCCCeE
Confidence 9999999999999987654 33333 345699999988765 999999999999999988753
No 73
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.5e-30 Score=245.90 Aligned_cols=236 Identities=25% Similarity=0.399 Sum_probs=206.5
Q ss_pred EecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC-CceEEEEeCCCEEEEE-cCCeEEEEECCCCce
Q 016224 145 QLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG-GEVGCMISEGPWIFIG-VTNFVKAWNTQTNTD 222 (393)
Q Consensus 145 ~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~ 222 (393)
...+|...|+++++ ++++|++|+.||+|++||+.+++.+..+..+ ..+.++..++.+++++ .|+.|++||+.+++.
T Consensus 128 ~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCE
T ss_pred cccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcE
Confidence 34567788999887 7899999999999999999999999888754 5677777788888876 789999999999887
Q ss_pred e-eecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCC
Q 016224 223 L-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLE 301 (393)
Q Consensus 223 ~-~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~ 301 (393)
. .+..|...|.++.|+++.+++++.||.|++||+...... .....+.+|...|.++++++++|++++.|+.|++||++
T Consensus 206 ~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI-TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp EEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCC-EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETT
T ss_pred EEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCc-eeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECC
Confidence 7 778899999999999999999999999999999876421 22356778999999999999999999999999999999
Q ss_pred CcceeeEeccCccceEEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCe
Q 016224 302 TLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNS 381 (393)
Q Consensus 302 ~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~ 381 (393)
+++++.++.+|...|.++.+++++|++|+.|+.|++||++++..+..+..|.. .+.++.+ + +.+|++|+.||.
T Consensus 285 ~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~--~---~~~l~sg~~dg~ 357 (435)
T 1p22_A 285 TCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRF--D---NKRIVSGAYDGK 357 (435)
T ss_dssp TCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEC--C---SSEEEEEETTSC
T ss_pred cCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC--cEEEEEe--c---CCEEEEEeCCCc
Confidence 99999999999999999999999999999999999999998888777766554 4888877 2 338999999999
Q ss_pred EEEEeCCce
Q 016224 382 VRFYDLPSV 390 (393)
Q Consensus 382 I~iwd~~s~ 390 (393)
|++||+.++
T Consensus 358 i~vwd~~~~ 366 (435)
T 1p22_A 358 IKVWDLVAA 366 (435)
T ss_dssp EEEEEHHHH
T ss_pred EEEEECCCC
Confidence 999998654
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-30 Score=265.68 Aligned_cols=282 Identities=10% Similarity=0.083 Sum_probs=206.7
Q ss_pred eeecceEEeeEecC---cEEEecCCCeEEEEECCCCcEEEEEecCC------------------cCCEEEEEecCCCCEE
Q 016224 107 VIKTDILCRNWVQG---NCMYGEKCKFLHSWTVGDGFKLLTQLEGH------------------QKVVSGITLPSGSDKL 165 (393)
Q Consensus 107 ~~~~~i~c~~~~~~---~~~~g~~dg~i~vwd~~~~~~~~~~l~~h------------------~~~I~~i~~s~~~~~l 165 (393)
.|..+|.+++|+++ .+++|+.|+.| +||+.++ +.+..+..| ...|++++|+|++++|
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~l 226 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHI 226 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEE
Confidence 46679999999985 46689999999 9999998 888888766 5789999999999999
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEec-------------------CCceEEEE--e----C-CCE----------------
Q 016224 166 YSGSKDETVRVWDCASGQCAGVINL-------------------GGEVGCMI--S----E-GPW---------------- 203 (393)
Q Consensus 166 ~s~s~dg~v~iwd~~~~~~~~~~~~-------------------~~~~~~~~--~----~-~~~---------------- 203 (393)
++++.||+|++||+.+++++..... ...+..+. + + +.+
T Consensus 227 asgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~ 306 (902)
T 2oaj_A 227 ITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLT 306 (902)
T ss_dssp EEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEE
T ss_pred EEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEE
Confidence 9999999999999988876653110 01111111 0 0 011
Q ss_pred -------------------------------------------------------------EEEEcCCeEEEEECCCCce
Q 016224 204 -------------------------------------------------------------IFIGVTNFVKAWNTQTNTD 222 (393)
Q Consensus 204 -------------------------------------------------------------l~~~~~~~i~v~d~~~~~~ 222 (393)
++.+.++.|++|++.++..
T Consensus 307 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~ 386 (902)
T 2oaj_A 307 MIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIF 386 (902)
T ss_dssp EEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCE
T ss_pred EEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCc
Confidence 2223456677777655532
Q ss_pred e--------eecCCCCcEEEEEE----------------------------------eCC--EEEEEeCCCcEEEEEecc
Q 016224 223 L--------SLSGPVGQVYAMAV----------------------------------GND--LLFAGTQDGAILAWKFNV 258 (393)
Q Consensus 223 ~--------~~~~~~~~v~~l~~----------------------------------~~~--~l~~~~~dg~I~vwd~~~ 258 (393)
. .+..|...|+++++ +|+ +|++|+.|++|++||+..
T Consensus 387 ~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~ 466 (902)
T 2oaj_A 387 TDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASH 466 (902)
T ss_dssp ECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSC
T ss_pred ccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCC
Confidence 2 12223344555444 565 899999999999999987
Q ss_pred CCccccCcee--e-----cCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCc--------------------------
Q 016224 259 TTNCFEPAAS--L-----KGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETL-------------------------- 303 (393)
Q Consensus 259 ~~~~~~~~~~--~-----~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~-------------------------- 303 (393)
+......... + .+|...|.+++|+ +.+||+|+.||+|+|||+.++
T Consensus 467 g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (902)
T 2oaj_A 467 GDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNT 546 (902)
T ss_dssp CTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGS
T ss_pred ccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCC
Confidence 6321101111 1 1788899999987 669999999999999999765
Q ss_pred -------------------ceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEE--ee--cCCccE
Q 016224 304 -------------------QCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTY--TH--NEEHGV 358 (393)
Q Consensus 304 -------------------~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~--~~~~~v 358 (393)
+++.++.+|.+.|++++|+ | +||+|+.|++|+|||+++...+.... .. .+...|
T Consensus 547 ~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V 625 (902)
T 2oaj_A 547 NGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACV 625 (902)
T ss_dssp SCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCE
T ss_pred ccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccce
Confidence 2467888999999999998 6 99999999999999987655432211 11 334569
Q ss_pred EEEEee-----eCCCCCcEEEEEeCCCeEEEEeC---Ccee
Q 016224 359 LALCGM-----PDSEGKPVLLCSCNDNSVRFYDL---PSVI 391 (393)
Q Consensus 359 ~~~~~~-----~~~~~~~~l~s~s~dg~I~iwd~---~s~~ 391 (393)
.+++|+ ||+.++++|++|+.|++|++||+ .+|+
T Consensus 626 ~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 626 TCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp EEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred EEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 999999 87655669999999999999999 5553
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.2e-30 Score=251.74 Aligned_cols=277 Identities=12% Similarity=0.130 Sum_probs=219.5
Q ss_pred cceeecceEEeeEecCc---EEEecCCCeEEEEECCCCcEEEEEecCCcC---CEEEEEecCC-CCEEEEEeCCCcEEEE
Q 016224 105 RAVIKTDILCRNWVQGN---CMYGEKCKFLHSWTVGDGFKLLTQLEGHQK---VVSGITLPSG-SDKLYSGSKDETVRVW 177 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~~~---~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~---~I~~i~~s~~-~~~l~s~s~dg~v~iw 177 (393)
...|...|.++.|++++ +++++.|+.|++||+.++ +.+..+.+|.. .|++++|+|+ +++|++++.||.|++|
T Consensus 156 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw 234 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF 234 (615)
T ss_dssp CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEE
T ss_pred eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 34577799999999874 668999999999999988 89999999999 9999999999 9999999999999999
Q ss_pred ECCCCeEEEEE-----ecCCceEEEEe-CCCEEEEE-cCCeEEEEECCCCcee-eecCC----CCcEEEEEEeC-CEEEE
Q 016224 178 DCASGQCAGVI-----NLGGEVGCMIS-EGPWIFIG-VTNFVKAWNTQTNTDL-SLSGP----VGQVYAMAVGN-DLLFA 244 (393)
Q Consensus 178 d~~~~~~~~~~-----~~~~~~~~~~~-~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~----~~~v~~l~~~~-~~l~~ 244 (393)
|+.+++.+..+ .+...+..+.. ++.+++++ .|+.|++||+.+++.. .+..+ ...+.++.+.. +++++
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 314 (615)
T 1pgu_A 235 DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIIS 314 (615)
T ss_dssp ETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEE
T ss_pred ECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEE
Confidence 99999999988 44555555443 77777765 7889999999988876 44443 46788888853 39999
Q ss_pred EeCCCcEEEEEeccCCccccCceeecCc----------------------------------------------------
Q 016224 245 GTQDGAILAWKFNVTTNCFEPAASLKGH---------------------------------------------------- 272 (393)
Q Consensus 245 ~~~dg~I~vwd~~~~~~~~~~~~~~~~~---------------------------------------------------- 272 (393)
++.|+.|++||+.... +...+.+|
T Consensus 315 ~~~~g~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 390 (615)
T 1pgu_A 315 LSLDGTLNFYELGHDE----VLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSIS 390 (615)
T ss_dssp EETTSCEEEEETTEEE----EEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEE
T ss_pred EECCCCEEEEECCCCc----EEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEe
Confidence 9999999999987532 11112111
Q ss_pred -------------------------------------------------------eeeEEEEEEcCCEEEEecC-CCcEE
Q 016224 273 -------------------------------------------------------SLAVVSLVVGANKLYSGSM-DNSIR 296 (393)
Q Consensus 273 -------------------------------------------------------~~~v~~l~~~~~~l~sg~~-dg~i~ 296 (393)
...+.++++++++|++++. |+.|+
T Consensus 391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQ 470 (615)
T ss_dssp TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEE
Confidence 2233444444566777777 78888
Q ss_pred EeeCCCccee-eEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeee--------
Q 016224 297 VWNLETLQCI-QTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMP-------- 365 (393)
Q Consensus 297 iwd~~~~~~~-~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-------- 365 (393)
+||+.+++.. ..+..|...|.+++|+ +++|++++.|+.|++||+.+++.+..+.. .+...+.+++|+|
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~~ 549 (615)
T 1pgu_A 471 VFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA-FRTSKINAISWKPAEKGANEE 549 (615)
T ss_dssp EEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC-CCSSCEEEEEECCCC------
T ss_pred EEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeec-CCCCceeEEEEcCcccccccc
Confidence 8888776655 6677899999999997 77999999999999999988776655444 1345699999998
Q ss_pred --CCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 366 --DSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 366 --~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
+.. +|++++.||.|++||+.++
T Consensus 550 ~~~~~---~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 550 EIEED---LVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp CCSCC---EEEEEETTSCEEEEESSCT
T ss_pred ccCCC---EEEEEcCCCcEEEEECCCC
Confidence 554 9999999999999999876
No 76
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=1.5e-29 Score=250.27 Aligned_cols=276 Identities=16% Similarity=0.193 Sum_probs=224.5
Q ss_pred eecceEEeeEecCc-EEEecCCCeEEEEECCCCc---EEEEEecCCcCC-EEEEEecC--CCCEEEEEeCCCcEEEEECC
Q 016224 108 IKTDILCRNWVQGN-CMYGEKCKFLHSWTVGDGF---KLLTQLEGHQKV-VSGITLPS--GSDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 108 ~~~~i~c~~~~~~~-~~~g~~dg~i~vwd~~~~~---~~~~~l~~h~~~-I~~i~~s~--~~~~l~s~s~dg~v~iwd~~ 180 (393)
|...|.+++|++++ .++.+.++.|++||+.++. +.+..+.+|... |++++|+| ++++|++++.||+|++||+.
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred ccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC
Confidence 45688999999874 3433338999999998651 467789999999 99999999 99999999999999999997
Q ss_pred CC--------eEEEEEec-CCceEEE--EeCCCEEEEEc-C----CeEEEEECCCCceeeecCCCCcEEEEEEeCC---E
Q 016224 181 SG--------QCAGVINL-GGEVGCM--ISEGPWIFIGV-T----NFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---L 241 (393)
Q Consensus 181 ~~--------~~~~~~~~-~~~~~~~--~~~~~~l~~~~-~----~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~ 241 (393)
++ +....+.. ...+..+ .+++++++++. + +.|.+||. ......+..|...|.+++|+|+ +
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-GNSLGEVSGHSQRINACHLKQSRPMR 175 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-CCEEEECCSCSSCEEEEEECSSSSCE
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-CCcceeeecCCccEEEEEECCCCCcE
Confidence 54 55566653 3444443 36888888764 3 47888882 2333478899999999999998 7
Q ss_pred EEEEeCCCcEEEEEeccCCccccCceeecCcee---eEEEEEEc---CCEEEEecCCCcEEEeeCCCcceeeEe-c---c
Q 016224 242 LFAGTQDGAILAWKFNVTTNCFEPAASLKGHSL---AVVSLVVG---ANKLYSGSMDNSIRVWNLETLQCIQTL-T---E 311 (393)
Q Consensus 242 l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~---~v~~l~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~-~---~ 311 (393)
|++++.|+.|++||+... +....+..|.. .|.+++++ +++|++++.|+.|++||+++++.+..+ . .
T Consensus 176 l~~~~~d~~v~vwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 251 (615)
T 1pgu_A 176 SMTVGDDGSVVFYQGPPF----KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP 251 (615)
T ss_dssp EEEEETTTEEEEEETTTB----EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBC
T ss_pred EEEEeCCCcEEEEeCCCc----ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccc
Confidence 999999999999998776 55677888888 99999986 558999999999999999999999999 6 8
Q ss_pred CccceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEeec--CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 312 HTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYTHN--EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 312 ~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
|...|.++.|+ +++|++++.|+.|++||+.+.+.+..+..+. ....+..+.+. +.. +|++++.||.|++||+.
T Consensus 252 ~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 252 VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNG---RIISLSLDGTLNFYELG 327 (615)
T ss_dssp CCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETT---EEEEEETTSCEEEEETT
T ss_pred cCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCC---eEEEEECCCCEEEEECC
Confidence 99999999995 7799999999999999999887776666542 12346677764 333 89999999999999998
Q ss_pred ceee
Q 016224 389 SVII 392 (393)
Q Consensus 389 s~~l 392 (393)
+++.
T Consensus 328 ~~~~ 331 (615)
T 1pgu_A 328 HDEV 331 (615)
T ss_dssp EEEE
T ss_pred CCcE
Confidence 8654
No 77
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=1.8e-29 Score=233.58 Aligned_cols=276 Identities=12% Similarity=0.128 Sum_probs=209.5
Q ss_pred ceeecceEEeeEecCc-EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEE-EEEeCCCcEEEEECCCCe
Q 016224 106 AVIKTDILCRNWVQGN-CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKL-YSGSKDETVRVWDCASGQ 183 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~-~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l-~s~s~dg~v~iwd~~~~~ 183 (393)
..|...|.|++|++++ .++.+.+..++||++.+. +.+.....+ .+..+++.++++.+ ++++.|++|++||+.+++
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPV-AHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTE-EEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCc-ceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 4577899999999874 444444456889999876 555444322 47778888888877 567788999999999999
Q ss_pred EEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCC-cee-eecCCCCcEEEEEEeCCEEEE--EeCCCcEEEEEeccC
Q 016224 184 CAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTN-TDL-SLSGPVGQVYAMAVGNDLLFA--GTQDGAILAWKFNVT 259 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~-~~~-~~~~~~~~v~~l~~~~~~l~~--~~~dg~I~vwd~~~~ 259 (393)
.+..+.....+..+......++++.++.|++||+.+. +.+ .+.. ....+++++.++++ |+.||.|++||+...
T Consensus 93 ~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 93 DVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp EEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEESSCTTCEEEEECCC-
T ss_pred EEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCCCcCcEEEEEECCCC
Confidence 9999998888888888888888888999999999988 444 2222 44456667786666 589999999999875
Q ss_pred Cc-----------cccC-ceeecCceeeEEEEEEc--CCEEEEecCCCc-EEEeeCCCcceeeEec-c-CccceEEEEEc
Q 016224 260 TN-----------CFEP-AASLKGHSLAVVSLVVG--ANKLYSGSMDNS-IRVWNLETLQCIQTLT-E-HTSVVMSLLCW 322 (393)
Q Consensus 260 ~~-----------~~~~-~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~-i~iwd~~~~~~~~~~~-~-~~~~v~~l~~~ 322 (393)
.. ...+ ...+.+|...|.+++|+ +++|++++.|++ |++||+++++++.++. + |...|.+++|+
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp -----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC
T ss_pred CccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC
Confidence 31 0112 67788999999999996 569999999998 9999999999999998 5 99999999998
Q ss_pred --CCEEEEEeCCCcEEEEEcCCCcceE--EE------------------E-eecCCccEEEEEeeeCCCCCcEEEEEeCC
Q 016224 323 --DQFLLSCSLDKTIKVWFATDSGNLE--VT------------------Y-THNEEHGVLALCGMPDSEGKPVLLCSCND 379 (393)
Q Consensus 323 --~~~l~s~s~dg~i~iwd~~~~~~~~--~~------------------~-~~~~~~~v~~~~~~~~~~~~~~l~s~s~d 379 (393)
+++|++++.|++|+|||+....... .+ . ..........++|++++. +|++++.|
T Consensus 250 ~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~---~l~~~~~d 326 (355)
T 3vu4_A 250 TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS---LVVVWPHT 326 (355)
T ss_dssp TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE---EEEEETTT
T ss_pred CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC---EEEEEeCC
Confidence 6799999999999999997653211 10 0 000111224577877655 89999999
Q ss_pred CeEEEEeCCce
Q 016224 380 NSVRFYDLPSV 390 (393)
Q Consensus 380 g~I~iwd~~s~ 390 (393)
|.+++|++..+
T Consensus 327 g~~~~~~~~~~ 337 (355)
T 3vu4_A 327 RMIETFKVVFD 337 (355)
T ss_dssp TEEEEEEEEEE
T ss_pred CeEEEEEEEcC
Confidence 99999998764
No 78
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=1.2e-30 Score=242.40 Aligned_cols=270 Identities=12% Similarity=0.102 Sum_probs=200.2
Q ss_pred cceEEeeEecCcEE--EecC-------CCeEEEEECCCCc-------E--EEEEecCCcCCEEEEEecCCCCEEEEE---
Q 016224 110 TDILCRNWVQGNCM--YGEK-------CKFLHSWTVGDGF-------K--LLTQLEGHQKVVSGITLPSGSDKLYSG--- 168 (393)
Q Consensus 110 ~~i~c~~~~~~~~~--~g~~-------dg~i~vwd~~~~~-------~--~~~~l~~h~~~I~~i~~s~~~~~l~s~--- 168 (393)
.||+|++|++++.+ +|+. ++.|++|++..+. . ....|.+|...|.+++++ ++.+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 38999999988543 4433 3369999987541 1 123577899999888775 4566665
Q ss_pred --------eCCCcEEEEECCCCeE-E---EEEecC------C--ceEEEEeCCCEEEEE---cCCeEEEEECCCCceeee
Q 016224 169 --------SKDETVRVWDCASGQC-A---GVINLG------G--EVGCMISEGPWIFIG---VTNFVKAWNTQTNTDLSL 225 (393)
Q Consensus 169 --------s~dg~v~iwd~~~~~~-~---~~~~~~------~--~~~~~~~~~~~l~~~---~~~~i~v~d~~~~~~~~~ 225 (393)
+.|+++++|++.+... + ...... . ...++.+++++++++ .|+.|++||+++++.+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 4578899999865432 1 111111 1 134556788887643 578999999999998866
Q ss_pred cCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCC----cEEE
Q 016224 226 SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDN----SIRV 297 (393)
Q Consensus 226 ~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg----~i~i 297 (393)
..|...|.+++|+|+ +|++++ ++.+.+|+..++.. ........|...|.+++|+ +.++++++.|+ .+++
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred eCCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 668889999999998 777776 55667777666532 2223445688888888875 56899988877 6888
Q ss_pred eeCCCcce----eeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEE-eecCCccEEEEEeeeCCCCC
Q 016224 298 WNLETLQC----IQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTY-THNEEHGVLALCGMPDSEGK 370 (393)
Q Consensus 298 wd~~~~~~----~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~ 370 (393)
||+..... ...+..|...|++++|+ +++|++|+.|++|+|||+.+++.+..+. .|. ..|.+++|+|++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~--~~V~~v~fSpdg~-- 325 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS--FAITEVTISPDST-- 325 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS--SCEEEEEECTTSC--
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc--CCEEEEEECCCCC--
Confidence 99876543 45677899999999998 6799999999999999999887766543 344 4599999999876
Q ss_pred cEEEEEeCCCeEEEEeCCc
Q 016224 371 PVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 371 ~~l~s~s~dg~I~iwd~~s 389 (393)
+|+++|.|++|+||++++
T Consensus 326 -~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 326 -YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp -EEEEEETTSEEEEEECCT
T ss_pred -EEEEEeCCCeEEEEEcCC
Confidence 999999999999999975
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7e-29 Score=224.33 Aligned_cols=243 Identities=24% Similarity=0.363 Sum_probs=202.9
Q ss_pred ECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC-CceEE--EEeCCCEEEEE-cCC
Q 016224 135 TVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG-GEVGC--MISEGPWIFIG-VTN 210 (393)
Q Consensus 135 d~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~~~~--~~~~~~~l~~~-~~~ 210 (393)
|..+++++.+++.+|...|++++| +++++|++++.||.|++||+.+++....+..+ ..+.+ +.+++.+++++ .++
T Consensus 3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 445566899999999999999999 99999999999999999999999888777654 34433 44678888775 888
Q ss_pred eEEEEECCCCc----eeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEE---cC
Q 016224 211 FVKAWNTQTNT----DLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVV---GA 283 (393)
Q Consensus 211 ~i~v~d~~~~~----~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~---~~ 283 (393)
.|++|++.... ...+..|...|.++.|++++|++++.|+.|++|| .. .....+..|...+.++.+ ++
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~----~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EG----SLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TT----EEEEEEECCSSCEEEEEEEETTT
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CC----cEEEecccCCCceeEEEEccCCC
Confidence 99999987653 3377889999999999888999999999999999 22 456677788889988877 57
Q ss_pred CEEEEecCCCcEEEeeCCCcceeeEecc-CccceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEE
Q 016224 284 NKLYSGSMDNSIRVWNLETLQCIQTLTE-HTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLAL 361 (393)
Q Consensus 284 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 361 (393)
+++++++.|+.|++|| ..+.+..+.. |...+.++.++ ...+++++.|+.|++||+++.+.+..+..|.. .+.++
T Consensus 156 ~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~ 231 (313)
T 3odt_A 156 NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHES--FVYCI 231 (313)
T ss_dssp TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEE
T ss_pred CEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCc--eEEEE
Confidence 7999999999999999 4566777777 89999999998 44599999999999999998887777766554 59999
Q ss_pred EeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 362 CGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 362 ~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+|+|++ .|++++.||.|++||+.++++
T Consensus 232 ~~~~~~----~l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 232 KLLPNG----DIVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp EECTTS----CEEEEETTSEEEEECTTTCCE
T ss_pred EEecCC----CEEEEecCCEEEEEECCCCce
Confidence 998865 388999999999999988754
No 80
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.3e-30 Score=244.98 Aligned_cols=250 Identities=13% Similarity=0.217 Sum_probs=199.0
Q ss_pred EEECCCCcEEEEEe-cCCcCCEEEEEecC-CCCEEEEEeCCCcEEEEECCC---Ce---EEEEEecCCceEEEE--eCCC
Q 016224 133 SWTVGDGFKLLTQL-EGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCAS---GQ---CAGVINLGGEVGCMI--SEGP 202 (393)
Q Consensus 133 vwd~~~~~~~~~~l-~~h~~~I~~i~~s~-~~~~l~s~s~dg~v~iwd~~~---~~---~~~~~~~~~~~~~~~--~~~~ 202 (393)
.|+. ++ +++..+ .+|.+.|++++|+| ++++|++|+.||+|+|||+.+ +. ....+.+...+.++. +++.
T Consensus 47 ~w~~-~g-~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 124 (437)
T 3gre_A 47 MGNL-RG-KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD 124 (437)
T ss_dssp GGGC-CC-CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS
T ss_pred cccc-cc-eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC
Confidence 3874 45 677888 89999999999999 999999999999999999876 32 345555666666654 4677
Q ss_pred EEEEE-cCCeEEEEECC---CCceee-----------ecC--CCCcEEEEEE--eCC--EEEEEeCCCcEEEEEeccCCc
Q 016224 203 WIFIG-VTNFVKAWNTQ---TNTDLS-----------LSG--PVGQVYAMAV--GND--LLFAGTQDGAILAWKFNVTTN 261 (393)
Q Consensus 203 ~l~~~-~~~~i~v~d~~---~~~~~~-----------~~~--~~~~v~~l~~--~~~--~l~~~~~dg~I~vwd~~~~~~ 261 (393)
+++++ .|+.|++||+. .++... +.. +...+.++.+ +++ +|++++.|+.|++||+++.
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-- 202 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL-- 202 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC--
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--
Confidence 77765 88999999995 443321 111 5566777774 344 9999999999999999886
Q ss_pred cccCceeecC--ceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEec-cCccceEEEEEcC------CEEEEEe
Q 016224 262 CFEPAASLKG--HSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLT-EHTSVVMSLLCWD------QFLLSCS 330 (393)
Q Consensus 262 ~~~~~~~~~~--~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~------~~l~s~s 330 (393)
+.+..+.. |...|.+++++ +++|++|+.||.|++||+++++++.++. .|...|.++.+.+ .+|++++
T Consensus 203 --~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 203 --ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp --CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred --eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 55666666 88999999996 5689999999999999999999999986 7888999997763 3899999
Q ss_pred CCCcEEEEEcCCCcceEEEEeec------------------------CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 331 LDKTIKVWFATDSGNLEVTYTHN------------------------EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 331 ~dg~i~iwd~~~~~~~~~~~~~~------------------------~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
.|+.|++||+++++.+..+..+. +...+.+++|+ +. ++|++++.|+.|++||
T Consensus 281 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~---~~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND---KILLTDEATSSIVMFS 356 (437)
T ss_dssp TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT---EEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc---eEEEecCCCCeEEEEE
Confidence 99999999999888777776543 23347777877 33 3899999999999999
Q ss_pred CCceee
Q 016224 387 LPSVII 392 (393)
Q Consensus 387 ~~s~~l 392 (393)
+.+++.
T Consensus 357 ~~~~~~ 362 (437)
T 3gre_A 357 LNELSS 362 (437)
T ss_dssp TTCGGG
T ss_pred CCCccc
Confidence 988753
No 81
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=3e-29 Score=229.99 Aligned_cols=243 Identities=14% Similarity=0.113 Sum_probs=201.8
Q ss_pred EEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe----EEEEEecCCceEEE--EeCCC-EEEEE-cCCeEE
Q 016224 142 LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ----CAGVINLGGEVGCM--ISEGP-WIFIG-VTNFVK 213 (393)
Q Consensus 142 ~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~----~~~~~~~~~~~~~~--~~~~~-~l~~~-~~~~i~ 213 (393)
.+....+|.+.|++++|+|++++|++++.|+.|++||+.+++ ......+...+.++ .+++. +++++ .++.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred ceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 444557899999999999999999999999999999998877 55555555555544 46788 66665 789999
Q ss_pred EEEC-CCCceeeecC--CCCcEEEEEEeCC-EEEEEeCCCcEEEEEecc---------CCccccCceeecCceeeEEEEE
Q 016224 214 AWNT-QTNTDLSLSG--PVGQVYAMAVGND-LLFAGTQDGAILAWKFNV---------TTNCFEPAASLKGHSLAVVSLV 280 (393)
Q Consensus 214 v~d~-~~~~~~~~~~--~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~---------~~~~~~~~~~~~~~~~~v~~l~ 280 (393)
+|++ .+++...+.. |...|.+++|++. +|++++.|+.|++||++. . +++..+. |...+.+++
T Consensus 83 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 83 KVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKN----LNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEE----SCSSSSS-SCCCEEEEE
T ss_pred EEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccC----CeeeEEe-eCCceEEEE
Confidence 9999 9988888888 9999999999964 999999999999999986 4 3344444 888999999
Q ss_pred EcCCEEEEecCCCcEEEeeCCC-cce--eeEeccCccceEEEEEcC---CEEEEEeCCCcEEEEEcCCC------cceEE
Q 016224 281 VGANKLYSGSMDNSIRVWNLET-LQC--IQTLTEHTSVVMSLLCWD---QFLLSCSLDKTIKVWFATDS------GNLEV 348 (393)
Q Consensus 281 ~~~~~l~sg~~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~------~~~~~ 348 (393)
++++.+++++.|+.|++||+++ +.. ......|...+.++.|++ ++|++++.||.|++|++... .....
T Consensus 158 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp ECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred ecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 9998899999999999999998 543 334556888999999974 69999999999999999876 55666
Q ss_pred EEeecC-------CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 349 TYTHNE-------EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 349 ~~~~~~-------~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+..+.. ...+.+++|+|++. +|++++.||.|++||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHK---FLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTC---CEEEEETTSCEEEEETTTTEE
T ss_pred eecccccccccccceeEEEEEEcCCCC---EEEEecCCceEEEEcCccHhH
Confidence 666543 33699999988765 899999999999999998764
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=4.4e-30 Score=237.36 Aligned_cols=233 Identities=16% Similarity=0.203 Sum_probs=193.2
Q ss_pred eecceEEeeEecC------cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecC-CCCEEEEEeCCCcEEEEECC
Q 016224 108 IKTDILCRNWVQG------NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 108 ~~~~i~c~~~~~~------~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~-~~~~l~s~s~dg~v~iwd~~ 180 (393)
|...|++++|+++ .+++|+.||.|++||+.++ +.+..+.+|...|++++|+| ++++|++++.||.|++||+.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM-QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC-CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc-eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 4568999999987 4678999999999999998 88889999999999999999 99999999999999999999
Q ss_pred CCeEEEEEe----cCCceEEEE--eCCCEEEEE-cCCeEEEEECCCCcee-e----------------------------
Q 016224 181 SGQCAGVIN----LGGEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTDL-S---------------------------- 224 (393)
Q Consensus 181 ~~~~~~~~~----~~~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~~-~---------------------------- 224 (393)
+++.+..+. +...+.++. +++.+++++ .|+.|++||+++++.. .
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 999998882 445555544 567777765 7899999999987643 1
Q ss_pred ecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccc----------cCceeecCceeeEEEEEE--c--CCEEEEec
Q 016224 225 LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCF----------EPAASLKGHSLAVVSLVV--G--ANKLYSGS 290 (393)
Q Consensus 225 ~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~----------~~~~~~~~~~~~v~~l~~--~--~~~l~sg~ 290 (393)
...|...|.+++|++++|++++.|+.|++||+....... ..+..+..|...|.++++ + +++|++++
T Consensus 227 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 227 RDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp CSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred ccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 223889999999998899999999999999998764311 224455667666666655 4 77999999
Q ss_pred CCCcEEEeeCCCccee----eEeccC--ccceEEEEEc--CCEEEEEeCCCcEEEEEcC
Q 016224 291 MDNSIRVWNLETLQCI----QTLTEH--TSVVMSLLCW--DQFLLSCSLDKTIKVWFAT 341 (393)
Q Consensus 291 ~dg~i~iwd~~~~~~~----~~~~~~--~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~ 341 (393)
.||.|++||+++++++ ..+..| ...|.+++|+ +++|++++.||.|++||+.
T Consensus 307 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 307 QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 9999999999987643 477777 7899999998 6799999999999999985
No 83
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=1.2e-29 Score=236.89 Aligned_cols=247 Identities=15% Similarity=0.198 Sum_probs=200.1
Q ss_pred EECCCCcEEEEEecCCcCCEEEEEecCCC-CEEEEEeCCCcEEEEECCCCeEEEEEe---cCCceEEEE--e-CCCEEEE
Q 016224 134 WTVGDGFKLLTQLEGHQKVVSGITLPSGS-DKLYSGSKDETVRVWDCASGQCAGVIN---LGGEVGCMI--S-EGPWIFI 206 (393)
Q Consensus 134 wd~~~~~~~~~~l~~h~~~I~~i~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~~~~~~--~-~~~~l~~ 206 (393)
|++... +....+.+|...|++++|+|++ ++|++|+.||.|+|||+.+++....+. +...+.++. + ++.++++
T Consensus 58 ~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 58 RSLKSY-KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp HHHTTC-EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred cccccc-ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 444554 7888999999999999999998 999999999999999999988887776 344555443 4 4566665
Q ss_pred E-cCCeEEEEECCCCceeeecC---CCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEE
Q 016224 207 G-VTNFVKAWNTQTNTDLSLSG---PVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLV 280 (393)
Q Consensus 207 ~-~~~~i~v~d~~~~~~~~~~~---~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~ 280 (393)
+ .|+.|++||+.+.....+.. +...|.+++|+++ +|++++.|+.|++||++. +....+..|...|.+++
T Consensus 137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~h~~~v~~~~ 211 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG-----HEIFKEKLHKAKVTHAE 211 (383)
T ss_dssp EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS-----CEEEEEECSSSCEEEEE
T ss_pred EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC-----CEEEEeccCCCcEEEEE
Confidence 5 88999999999766555544 4488999999998 999999999999999842 45677888999999999
Q ss_pred EcC--C-EEEEecCCCcEEEeeCCC----cceeeEeccCccceEEEEEcC---CEEEEEeCCCcEEEEEcCCCcceEEEE
Q 016224 281 VGA--N-KLYSGSMDNSIRVWNLET----LQCIQTLTEHTSVVMSLLCWD---QFLLSCSLDKTIKVWFATDSGNLEVTY 350 (393)
Q Consensus 281 ~~~--~-~l~sg~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~l~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~ 350 (393)
|++ . +|++++.|+.|++||+++ ++++..+ .|...|.+++|++ ++|++++.|+.|++||+++......+.
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 974 3 899999999999999998 6666666 6999999999975 799999999999999999887766666
Q ss_pred eecC---------------CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 351 THNE---------------EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 351 ~~~~---------------~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
.+.. ...+..++++|++. + +++.|+.|++||+.++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~---~--s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 291 IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ---L--LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT---T--CTTCCCCEEEEETTTCCE
T ss_pred cccccccccccceEEeccCCCCceEEEecCCcc---c--ccCCCCeEEEEecCCCce
Confidence 4431 12345566666544 3 778999999999988764
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=4.6e-29 Score=233.60 Aligned_cols=247 Identities=14% Similarity=0.129 Sum_probs=200.2
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe------EEEEEec-CCceEEE--EeC----C---CEE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ------CAGVINL-GGEVGCM--ISE----G---PWI 204 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~------~~~~~~~-~~~~~~~--~~~----~---~~l 204 (393)
.....+.+|...|++|+|+| ++|++++.||+|++||+.+++ .+..+.. ...+.++ .++ + .+|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 45667889999999999998 799999999999999999887 5555554 3445443 356 6 677
Q ss_pred EEE-cCCeEEEEECCCCc------eeeecCC-----CCcEEEEEEe----CC--E-EEEEeCCCcEEEEEecc------C
Q 016224 205 FIG-VTNFVKAWNTQTNT------DLSLSGP-----VGQVYAMAVG----ND--L-LFAGTQDGAILAWKFNV------T 259 (393)
Q Consensus 205 ~~~-~~~~i~v~d~~~~~------~~~~~~~-----~~~v~~l~~~----~~--~-l~~~~~dg~I~vwd~~~------~ 259 (393)
+++ .++.|++|++.+++ ...+..| ...|.+++|+ ++ + |++++.||.|++||+.. .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 765 78999999999887 4477777 5999999999 76 7 99999999999999997 4
Q ss_pred Ccc-ccCceee-------cCceeeEEEEEEcCC-EEEEecCCCcEEEeeCCCcceeeEecc---C---ccceEEEEEc--
Q 016224 260 TNC-FEPAASL-------KGHSLAVVSLVVGAN-KLYSGSMDNSIRVWNLETLQCIQTLTE---H---TSVVMSLLCW-- 322 (393)
Q Consensus 260 ~~~-~~~~~~~-------~~~~~~v~~l~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~l~~~-- 322 (393)
... +.+...+ ..|...|.+++++++ +|++++.|+.|++||+++++.+..+.. | ...|.+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 221 1111144 457888999998733 999999999999999999999999998 9 9999999997
Q ss_pred CCEEEEEeCC---CcEEEEEcCCCcceEEEEeec-----------CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 323 DQFLLSCSLD---KTIKVWFATDSGNLEVTYTHN-----------EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 323 ~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+++|++++.| +.|++||+++.+.+..+.... +...+.+++|+|++. +|++++.||.|++||+.
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE---TLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS---EEEEEETTSEEEEEETT
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC---EEEEEeCCCeEEEEEcC
Confidence 6799999999 999999999887777666510 344699999988765 99999999999999998
Q ss_pred ceee
Q 016224 389 SVII 392 (393)
Q Consensus 389 s~~l 392 (393)
++++
T Consensus 322 ~~~~ 325 (397)
T 1sq9_A 322 TKER 325 (397)
T ss_dssp TTEE
T ss_pred CCce
Confidence 8764
No 85
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.1e-29 Score=238.79 Aligned_cols=271 Identities=17% Similarity=0.192 Sum_probs=211.0
Q ss_pred eEEeeEecCcEE---EecCCCeEEEEECCCCcE---EEEEecCCcCCEEEEEecC-CCCEEEEEeCCCcEEEEECCCC--
Q 016224 112 ILCRNWVQGNCM---YGEKCKFLHSWTVGDGFK---LLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCASG-- 182 (393)
Q Consensus 112 i~c~~~~~~~~~---~g~~dg~i~vwd~~~~~~---~~~~l~~h~~~I~~i~~s~-~~~~l~s~s~dg~v~iwd~~~~-- 182 (393)
..+++++++... +++.||.|+||++.+..+ .+..+.+|...|++++|+| ++++|++|+.||+|+|||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 345677777544 378899999999865422 3446789999999999999 9999999999999999999987
Q ss_pred -----eEEEEEecC-CceEEEE--eCC-CEEEE-EcCCeEEEEECCCCcee-ee--cCCCCcEEEEEEeCC--EEEEEeC
Q 016224 183 -----QCAGVINLG-GEVGCMI--SEG-PWIFI-GVTNFVKAWNTQTNTDL-SL--SGPVGQVYAMAVGND--LLFAGTQ 247 (393)
Q Consensus 183 -----~~~~~~~~~-~~~~~~~--~~~-~~l~~-~~~~~i~v~d~~~~~~~-~~--~~~~~~v~~l~~~~~--~l~~~~~ 247 (393)
+.+..+..+ ..+.++. +++ .++++ +.|+.|++||+.+++.. .+ ..|...|.+++|+++ +|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 456666644 4454443 455 46665 48899999999998877 55 679999999999987 8999999
Q ss_pred CCcEEEEEeccCCccccCceee-cCceee-EEEEEEc--CCEEEEe---cCCCcEEEeeCCCcce-eeEec-cCccceEE
Q 016224 248 DGAILAWKFNVTTNCFEPAASL-KGHSLA-VVSLVVG--ANKLYSG---SMDNSIRVWNLETLQC-IQTLT-EHTSVVMS 318 (393)
Q Consensus 248 dg~I~vwd~~~~~~~~~~~~~~-~~~~~~-v~~l~~~--~~~l~sg---~~dg~i~iwd~~~~~~-~~~~~-~~~~~v~~ 318 (393)
|+.|++||++.+ +.+..+ ..|... +.++.|+ +.+|++| +.|+.|++||+++++. +.... .|...+.+
T Consensus 197 d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 272 (402)
T 2aq5_A 197 DKRVRVIEPRKG----TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL 272 (402)
T ss_dssp TSEEEEEETTTT----EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred CCcEEEEeCCCC----ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence 999999999886 445555 567654 6777775 5578888 7999999999998664 33333 46778999
Q ss_pred EEEc--CCEEE-EEeCCCcEEEEEcCCCcc-eEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 319 LLCW--DQFLL-SCSLDKTIKVWFATDSGN-LEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 319 l~~~--~~~l~-s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+.|+ +++|+ +++.|+.|++||+.+.+. +..+..+.....+.+++|+|+.. +++ +.++.+++|++.+++
T Consensus 273 ~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~---~~~--s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRG---LEV--NKCEIARFYKLHERK 344 (402)
T ss_dssp EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGG---SCG--GGTEEEEEEEEETTE
T ss_pred EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccc---cce--ecceeEEEEEcCCCc
Confidence 9998 56775 566799999999988775 66666666566799999998765 555 357799999998754
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-28 Score=234.84 Aligned_cols=271 Identities=15% Similarity=0.159 Sum_probs=210.4
Q ss_pred ecceEEeeEecC-cEEEecCCCeEEEEECCCCcE---EEEEecC------------------------------------
Q 016224 109 KTDILCRNWVQG-NCMYGEKCKFLHSWTVGDGFK---LLTQLEG------------------------------------ 148 (393)
Q Consensus 109 ~~~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~---~~~~l~~------------------------------------ 148 (393)
..++.|+.|+++ .+++++.++.|++||+.++ + .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAIIKNCILSFKYQSP-NHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEETTEEEEEEEETT-TEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEeCCeEEEEECCCC-CcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 348899999976 4667778999999999888 4 4545443
Q ss_pred ------------------CcCCEEEEEecCCCCEE-EEEeCCCcEEEEECC--CCeEEEEEe---cCCceEEE--EeCCC
Q 016224 149 ------------------HQKVVSGITLPSGSDKL-YSGSKDETVRVWDCA--SGQCAGVIN---LGGEVGCM--ISEGP 202 (393)
Q Consensus 149 ------------------h~~~I~~i~~s~~~~~l-~s~s~dg~v~iwd~~--~~~~~~~~~---~~~~~~~~--~~~~~ 202 (393)
|...|++++|+|++++| ++++.||.|+|||+. +++.+..+. ....+.++ .+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 34479999999999996 899999999999999 888777764 33444444 36788
Q ss_pred EEEEE-cCCeEEEEECCCCcee-----eecCCCCcEEEEEEeCC-----EEEEEeCCCcEEEEEeccCCccccCcee-ec
Q 016224 203 WIFIG-VTNFVKAWNTQTNTDL-----SLSGPVGQVYAMAVGND-----LLFAGTQDGAILAWKFNVTTNCFEPAAS-LK 270 (393)
Q Consensus 203 ~l~~~-~~~~i~v~d~~~~~~~-----~~~~~~~~v~~l~~~~~-----~l~~~~~dg~I~vwd~~~~~~~~~~~~~-~~ 270 (393)
+|+++ .++.|++|++.++... .+.+|...|.+++|+|+ +|++++.|+.|++||+... ..+.. +.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~ 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC----FIVDKWLF 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT----TCEEEECC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC----ceeeeeec
Confidence 88776 7789999999877654 56778999999999986 8999999999999999876 33444 55
Q ss_pred CceeeEEEEEEc-CCEEEEecCCCcEEEeeCCCcceeeEeccC-------------------------ccceEEEEEc--
Q 016224 271 GHSLAVVSLVVG-ANKLYSGSMDNSIRVWNLETLQCIQTLTEH-------------------------TSVVMSLLCW-- 322 (393)
Q Consensus 271 ~~~~~v~~l~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-------------------------~~~v~~l~~~-- 322 (393)
+|...|.+++|+ +++|++++.|+.|++||+++++++..+..+ ...+.++.+.
T Consensus 239 ~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 239 GHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp CCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred CCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 899999999995 779999999999999999999998888633 3467888888
Q ss_pred CCEEEEEe-CCCcEEEEEc--CCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC-------CCeEEEEeCC
Q 016224 323 DQFLLSCS-LDKTIKVWFA--TDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN-------DNSVRFYDLP 388 (393)
Q Consensus 323 ~~~l~s~s-~dg~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~-------dg~I~iwd~~ 388 (393)
+++|++++ .|+.|+||++ .+...+..+........+.+++|+|+. ++++.+. +..|.+|.+.
T Consensus 319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~----~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDE----FQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTE----EEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCc----EEEEEecccCCCCCCcceEEEEEE
Confidence 67899888 8999999999 555333333332223569999998832 4555433 4557888753
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=3.2e-30 Score=275.31 Aligned_cols=275 Identities=20% Similarity=0.264 Sum_probs=231.5
Q ss_pred eeecceEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeE
Q 016224 107 VIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC 184 (393)
Q Consensus 107 ~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 184 (393)
.|...+.++.|+++ .+++++.|+.|++||+.++ +.+..+.+|...|++++|+|++++|++++.||+|++||+.+...
T Consensus 838 ~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~ 916 (1249)
T 3sfz_A 838 GHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCK 916 (1249)
T ss_dssp SSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHS
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccce
Confidence 56678999999976 4567999999999999998 88999999999999999999999999999999999999653100
Q ss_pred -----------------------------EEE---------EecCCceE--EEEeCCCEEEEE-cCCeEEEEECCCCcee
Q 016224 185 -----------------------------AGV---------INLGGEVG--CMISEGPWIFIG-VTNFVKAWNTQTNTDL 223 (393)
Q Consensus 185 -----------------------------~~~---------~~~~~~~~--~~~~~~~~l~~~-~~~~i~v~d~~~~~~~ 223 (393)
... ......+. ++.+++.+++++ .++.|++|++.+++..
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~ 996 (1249)
T 3sfz_A 917 NSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF 996 (1249)
T ss_dssp CCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE
T ss_pred eeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCcee
Confidence 000 00111222 234678888876 7889999999998876
Q ss_pred -eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC-CEEEEecCCCcEEEee
Q 016224 224 -SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA-NKLYSGSMDNSIRVWN 299 (393)
Q Consensus 224 -~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~sg~~dg~i~iwd 299 (393)
.+.+|...|.+++|+++ +|++++.||.|++||+.++.. .....|...+.++.+.+ ..+++++.|+.|++||
T Consensus 997 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd 1071 (1249)
T 3sfz_A 997 SSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDY-----VFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWN 1071 (1249)
T ss_dssp EECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEE-----ECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEE
T ss_pred eecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCce-----EEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEE
Confidence 67789999999999998 899999999999999987632 23457889999999974 5899999999999999
Q ss_pred CCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe
Q 016224 300 LETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC 377 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s 377 (393)
+.+++.+..+.+|...|.+++|+ +++|++++.|++|++||+.++..+..+..|.. .+.+++|+|++. +|++++
T Consensus 1072 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~--~v~~~~~s~dg~---~lat~~ 1146 (1249)
T 3sfz_A 1072 VITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNG--CVRCSAFSLDGI---LLATGD 1146 (1249)
T ss_dssp TTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSS--CEEEEEECSSSS---EEEEEE
T ss_pred CCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCC--cEEEEEECCCCC---EEEEEe
Confidence 99999999999999999999998 66999999999999999998887766666554 489999998766 999999
Q ss_pred CCCeEEEEeCCceee
Q 016224 378 NDNSVRFYDLPSVII 392 (393)
Q Consensus 378 ~dg~I~iwd~~s~~l 392 (393)
.||.|++||+.++++
T Consensus 1147 ~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1147 DNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp TTSCCCEEESSSSCC
T ss_pred CCCEEEEEECCCCce
Confidence 999999999998753
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=4.1e-29 Score=251.39 Aligned_cols=244 Identities=20% Similarity=0.332 Sum_probs=198.3
Q ss_pred EEEEEecCCcCCEEEEEecCC-CCEEEEEeCCCcEEEEECCCC-----eEEEEEecC-CceEEE--EeCCCEEEEE-cCC
Q 016224 141 KLLTQLEGHQKVVSGITLPSG-SDKLYSGSKDETVRVWDCASG-----QCAGVINLG-GEVGCM--ISEGPWIFIG-VTN 210 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~-~~~l~s~s~dg~v~iwd~~~~-----~~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~ 210 (393)
+....+++|.+.|++|+|+++ +++|+||+.|++|++||+.+. .....+..+ ..+.++ .+++++|+++ .|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 566789999999999999986 479999999999999999763 344555544 344443 4678888876 789
Q ss_pred eEEEEECCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC----
Q 016224 211 FVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---- 283 (393)
Q Consensus 211 ~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---- 283 (393)
.|++||+.++... .+.+|...|.+++|+++ +|++++.|++|++||+..... ........+|...|.++.+++
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSS
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCc
Confidence 9999999998776 78899999999999988 899999999999999764321 112223357888999999974
Q ss_pred CEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEE
Q 016224 284 NKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLAL 361 (393)
Q Consensus 284 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 361 (393)
..|++++.|++|++||+++++++.++.+|...|.+++|+ +++|++++.|+.|+|||+.+++.+..+ .....+.++
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~---~~~~~v~~~ 608 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL---EANSVIHAL 608 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC---BCSSCEEEE
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe---cCCCcEEEE
Confidence 379999999999999999999999999999999999998 679999999999999999887655433 234568999
Q ss_pred EeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 362 CGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 362 ~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+|+|+.. +|+++ .|+.|++||+.++++
T Consensus 609 ~~sp~~~---~l~~~-~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 609 CFSPNRY---WLCAA-TEHGIKIWDLESKSI 635 (694)
T ss_dssp EECSSSS---EEEEE-ETTEEEEEETTTTEE
T ss_pred EEcCCCc---EEEEE-cCCCEEEEECCCCCC
Confidence 9988754 55555 567799999988754
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=2.5e-29 Score=231.65 Aligned_cols=238 Identities=18% Similarity=0.221 Sum_probs=194.9
Q ss_pred eeecceEEeeEecC-----cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEE------ecCCCCEEEEEeCCCcEE
Q 016224 107 VIKTDILCRNWVQG-----NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGIT------LPSGSDKLYSGSKDETVR 175 (393)
Q Consensus 107 ~~~~~i~c~~~~~~-----~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~------~s~~~~~l~s~s~dg~v~ 175 (393)
.|..+|.|+.|+++ .+++|+.|+.|++||+.++...+..+.+|...|.+++ |+|++++|++++.||.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 57789999999975 3668999999999999988437889999999999995 578999999999999999
Q ss_pred EEECCCCe-EEEEEecCC-----ceEEEE------eCCCEEEEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeC---
Q 016224 176 VWDCASGQ-CAGVINLGG-----EVGCMI------SEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGN--- 239 (393)
Q Consensus 176 iwd~~~~~-~~~~~~~~~-----~~~~~~------~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~--- 239 (393)
+||+.+++ .+..+.... .+.++. +++.+++++ .++.|++||+++++......|...|.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~ 222 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDI 222 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSS
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCC
Confidence 99999886 666665422 344443 678888876 67899999999999888888999999999997
Q ss_pred C--EEEEEeCCCcEEEEEeccCCccccC-ceeecCceeeEEEEEEcCC---EEEEecCCCcEEEeeCCCc----------
Q 016224 240 D--LLFAGTQDGAILAWKFNVTTNCFEP-AASLKGHSLAVVSLVVGAN---KLYSGSMDNSIRVWNLETL---------- 303 (393)
Q Consensus 240 ~--~l~~~~~dg~I~vwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~---~l~sg~~dg~i~iwd~~~~---------- 303 (393)
+ +|++++.||.|++||++........ ...+..|...|.+++++++ +|++++.||.|++||++++
T Consensus 223 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g 302 (357)
T 3i2n_A 223 SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEG 302 (357)
T ss_dssp SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTS
T ss_pred CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCC
Confidence 5 9999999999999999886321110 1123389999999999754 7999999999999999753
Q ss_pred ---------ceeeEeccCccceEEEEEc--CCEEE-EEeCCCcEEEEEcCCCc
Q 016224 304 ---------QCIQTLTEHTSVVMSLLCW--DQFLL-SCSLDKTIKVWFATDSG 344 (393)
Q Consensus 304 ---------~~~~~~~~~~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~ 344 (393)
+++..+..|...|.+++|+ +++|+ +++.|+.|+|||+.+..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 303 IEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 4677888999999999998 55676 89999999999997654
No 90
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=8.3e-29 Score=229.57 Aligned_cols=238 Identities=12% Similarity=0.050 Sum_probs=198.7
Q ss_pred ecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe--EEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCC
Q 016224 146 LEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ--CAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQT 219 (393)
Q Consensus 146 l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~--~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~ 219 (393)
+..|..+|++++|+|++++|++++.|+.|++||+.+++ .+..+..+ ..+.++ .+++.+++++ .|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45699999999999999999999999999999999987 77777644 444443 4678888775 788999999988
Q ss_pred Ccee---eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCC
Q 016224 220 NTDL---SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMD 292 (393)
Q Consensus 220 ~~~~---~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~d 292 (393)
++.. .+..|...|.+++|+++ +|++++.|+.|++||++..............|...|.+++++ +++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 8743 45778999999999987 999999999999999998643211223346688999999996 5689999999
Q ss_pred CcEEEeeC------------------CCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEee
Q 016224 293 NSIRVWNL------------------ETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTH 352 (393)
Q Consensus 293 g~i~iwd~------------------~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 352 (393)
+.|++||+ .+++++..+..|...+.++.|+ +++|++++.|+.|++||+++.+.+..+..+
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 99999995 4678899999999999999997 669999999999999999988877777655
Q ss_pred cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 353 NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 353 ~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
.. .+.+++|+|++. +|+++ .|+.|++|++.+
T Consensus 244 ~~--~v~~~~~~~~~~---~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 244 TL--PLLAVTFITESS---LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SC--CEEEEEEEETTE---EEEEE-TTSSCEEEEEET
T ss_pred CC--CeEEEEEecCCC---EEEEE-eCCeEEEEEccC
Confidence 43 589999998765 77766 999999999987
No 91
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-27 Score=221.34 Aligned_cols=246 Identities=15% Similarity=0.203 Sum_probs=205.8
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC-CceEEEE--eCCCEEEEE-cCCeEEEEE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG-GEVGCMI--SEGPWIFIG-VTNFVKAWN 216 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~--~~~~~l~~~-~~~~i~v~d 216 (393)
.....+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+..+ ..+.++. +++.+++++ .|+.|++||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 555678999999999999999999999999999999999999999988754 4454443 567777765 889999999
Q ss_pred CCCCceeeecCCCCcEEEEEEeCC--EEEEEeCC-----CcEEEEEeccCCccc-------cCceeecCcee--eEEEEE
Q 016224 217 TQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQD-----GAILAWKFNVTTNCF-------EPAASLKGHSL--AVVSLV 280 (393)
Q Consensus 217 ~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~d-----g~I~vwd~~~~~~~~-------~~~~~~~~~~~--~v~~l~ 280 (393)
+.+++......+...|.+++|+++ +|++++.+ +.|.+||+....... .....+..|.. .+.+++
T Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 103 VSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp TTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 999998855558999999999998 89999988 999999998764321 12334444544 788888
Q ss_pred Ec--CCEEEEecCCCcEEEeeCCC-cceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCC
Q 016224 281 VG--ANKLYSGSMDNSIRVWNLET-LQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE 355 (393)
Q Consensus 281 ~~--~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 355 (393)
++ +++|++++.|+.|++||+++ .+.+..+..|...|.++.|+ +++|++++.|+.|++||+++.+.+..+. ..
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~ 259 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE---TD 259 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CS
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec---CC
Confidence 86 66999999999999999998 78899999999999999997 6799999999999999998877666555 34
Q ss_pred ccEEEEEeeeCCCCCcEEEEEeCCC--------------eEEEEeCCceee
Q 016224 356 HGVLALCGMPDSEGKPVLLCSCNDN--------------SVRFYDLPSVII 392 (393)
Q Consensus 356 ~~v~~~~~~~~~~~~~~l~s~s~dg--------------~I~iwd~~s~~l 392 (393)
..+..++|+|+.. ++++++.++ .|++||+.+++.
T Consensus 260 ~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 260 CPLNTAVITPLKE---FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp SCEEEEEECSSSS---EEEEEECCC-------------CEEEEEETTTCCE
T ss_pred CCceeEEecCCCc---eEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 4588999988766 899999888 899999987653
No 92
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=6.5e-29 Score=224.06 Aligned_cols=205 Identities=16% Similarity=0.198 Sum_probs=169.2
Q ss_pred EEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC--eEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCc
Q 016224 144 TQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG--QCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNT 221 (393)
Q Consensus 144 ~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~ 221 (393)
..+.+|...|++++|+|++++|++|+.|++|+|||+.+. +.+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~------------------------------------ 46 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLI------------------------------------ 46 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCC------------------------------------
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEE------------------------------------
Confidence 467899999999999999999999999999999998643 222
Q ss_pred eeeecCCCCcEEEEEEeC----CEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc----CCEEEEecCCC
Q 016224 222 DLSLSGPVGQVYAMAVGN----DLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG----ANKLYSGSMDN 293 (393)
Q Consensus 222 ~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~sg~~dg 293 (393)
..+.+|...|.+++|++ ++|++++.|++|++||++.+.. .....+..|...|.+++|+ +.+|++++.|+
T Consensus 47 -~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 47 -DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp -EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred -EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce--EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 24568999999999974 3999999999999999986532 3456677899999999996 45899999999
Q ss_pred cEEEeeCCCcc--eeeEeccCccceEEEEEcC---------------CEEEEEeCCCcEEEEEcCCCcc----eEEEEee
Q 016224 294 SIRVWNLETLQ--CIQTLTEHTSVVMSLLCWD---------------QFLLSCSLDKTIKVWFATDSGN----LEVTYTH 352 (393)
Q Consensus 294 ~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~---------------~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~ 352 (393)
.|++||+++.. ....+.+|...|.+++|++ ++|++|+.|++|+|||+++... ...+..|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998763 2466788999999999984 4899999999999999987653 2233333
Q ss_pred cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 353 NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 353 ~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
...|.+++|+|+...+.+|++++.|++|+|||+.+
T Consensus 204 --~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 204 --SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp --SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred --CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 34699999999853345999999999999999876
No 93
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.9e-29 Score=229.78 Aligned_cols=236 Identities=14% Similarity=0.081 Sum_probs=190.1
Q ss_pred eecceEEeeEecCcEEE-----------ecCCCeEEEEECCCCcEEEE---Ee-----cCCcCCEEEEEecCCCCEEEEE
Q 016224 108 IKTDILCRNWVQGNCMY-----------GEKCKFLHSWTVGDGFKLLT---QL-----EGHQKVVSGITLPSGSDKLYSG 168 (393)
Q Consensus 108 ~~~~i~c~~~~~~~~~~-----------g~~dg~i~vwd~~~~~~~~~---~l-----~~h~~~I~~i~~s~~~~~l~s~ 168 (393)
+...+.|+.+..+.+++ |+.|+.+++|++.+....+. .. ..+...+.+++|+|||++|+++
T Consensus 72 ~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~a 151 (365)
T 4h5i_A 72 NDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIA 151 (365)
T ss_dssp TSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEE
T ss_pred CCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEE
Confidence 34467788887766655 45688899999875422222 22 2345679999999999998755
Q ss_pred e--CCCcEEEEECCCCeEEEEEecCCceEEE--EeCCCEEEEEcCCeEEEEECCCCcee---eecCCCCcEEEEEEeCC-
Q 016224 169 S--KDETVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL---SLSGPVGQVYAMAVGND- 240 (393)
Q Consensus 169 s--~dg~v~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~i~v~d~~~~~~~---~~~~~~~~v~~l~~~~~- 240 (393)
+ .|++|+|||+.+++++..+.+...+..+ .+++++++++.++.+.+|+..++... ....|...|.+++|+|+
T Consensus 152 s~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg 231 (365)
T 4h5i_A 152 SSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADD 231 (365)
T ss_dssp ESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT
T ss_pred ECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC
Confidence 4 7899999999999999999887776544 47899999998888999998888765 34568889999999998
Q ss_pred -EEEEEeCCC----cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEe-ccC
Q 016224 241 -LLFAGTQDG----AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTL-TEH 312 (393)
Q Consensus 241 -~l~~~~~dg----~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~~ 312 (393)
.+++++.|+ .+++|++............+.+|...|.+++|+ +++||+|+.|++|+|||+++++++.++ .+|
T Consensus 232 ~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH 311 (365)
T 4h5i_A 232 TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH 311 (365)
T ss_dssp EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS
T ss_pred CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc
Confidence 888888777 588888876643333445677899999999986 569999999999999999999999885 789
Q ss_pred ccceEEEEEc--CCEEEEEeCCCcEEEEEcCCC
Q 016224 313 TSVVMSLLCW--DQFLLSCSLDKTIKVWFATDS 343 (393)
Q Consensus 313 ~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~ 343 (393)
...|++++|+ +++|+++|.|++|+|||+...
T Consensus 312 ~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 312 SFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999998 679999999999999999643
No 94
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.1e-28 Score=228.30 Aligned_cols=246 Identities=11% Similarity=0.090 Sum_probs=179.8
Q ss_pred EEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCC-ceEEEEeCCCEEE-EE-cC
Q 016224 133 SWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGG-EVGCMISEGPWIF-IG-VT 209 (393)
Q Consensus 133 vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~l~-~~-~~ 209 (393)
||++.+. +.+.++..|...|++++|+|++++|++|+.|+ ++|||+.+++......... ....+..++..++ ++ .+
T Consensus 3 i~s~~~~-~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 3 LGSMITR-NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSST
T ss_pred ccccccc-CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCc
Confidence 4666665 66777889999999999999999999998775 7899999887776655432 2344445666664 33 66
Q ss_pred CeEEEEECCCCceeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEE-
Q 016224 210 NFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYS- 288 (393)
Q Consensus 210 ~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s- 288 (393)
+.|++||..+++.+....+...|.++.++++.++++. ++.|++||+..... .+..+.. ...+.+++ .++++.
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~---~~~~~~~-~~~~~~~s--~~~la~~ 153 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWK---RITDDIR-FGGVCEFS--NGLLVYS 153 (355)
T ss_dssp TEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCC---BSSCCEE-EEEEEEEE--TTEEEEE
T ss_pred cEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEE-cCEEEEEECCCCce---eeEEecc-CCceEEEE--ccEEEEe
Confidence 7999999999988855567889999999999766654 78999999987621 2222222 33444444 477666
Q ss_pred -ecCCCcEEEeeCCCcc----------------eeeEeccCccceEEEEEc--CCEEEEEeCCCc-EEEEEcCCCcceEE
Q 016224 289 -GSMDNSIRVWNLETLQ----------------CIQTLTEHTSVVMSLLCW--DQFLLSCSLDKT-IKVWFATDSGNLEV 348 (393)
Q Consensus 289 -g~~dg~i~iwd~~~~~----------------~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~-i~iwd~~~~~~~~~ 348 (393)
|+.||.|++||+++++ .+..+.+|...|.+++|+ +++|++++.|++ |+|||+++++.+..
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 6899999999999865 278899999999999998 679999999998 99999998888877
Q ss_pred EEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 349 TYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 349 ~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
+....+...+.+++|+|++. +|++++.|++|++||++..
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~---~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGS---KLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EECTTCCSCEEEEEECTTSC---EEEEEETTCEEEEEESSCC
T ss_pred EEcCCCCCcEEEEEECCCCC---EEEEEECCCEEEEEEccCC
Confidence 76322345699999998766 9999999999999999754
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.7e-28 Score=250.84 Aligned_cols=243 Identities=17% Similarity=0.313 Sum_probs=210.0
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC-CceEE--EEeCCCEEEEE-cCCeEEEEE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG-GEVGC--MISEGPWIFIG-VTNFVKAWN 216 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~~~~--~~~~~~~l~~~-~~~~i~v~d 216 (393)
+..+.+.+|.+.|++++|+|++++|++++.||.|+|||+.+++.+..+..+ ..+.+ +.+++++|+++ .++.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 456788999999999999999999999999999999999999999888854 34443 45788888776 788999999
Q ss_pred CCCCcee-eecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC---CEEEEec
Q 016224 217 TQTNTDL-SLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGS 290 (393)
Q Consensus 217 ~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~ 290 (393)
+.+++.. .+..|...|.+++|+|+ +|++++.||.|++||+.... .....+.+|...|.+++|++ +.|++++
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW---ALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS---EEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc---eEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 9998877 77889999999999998 89999999999999998753 44566778999999999975 4899999
Q ss_pred CCCcEEEeeCCCcceeeEeccCc-cceEEEEEc----CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeee
Q 016224 291 MDNSIRVWNLETLQCIQTLTEHT-SVVMSLLCW----DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMP 365 (393)
Q Consensus 291 ~dg~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 365 (393)
.|+.|++||+++++....+..+. ..+.++.|+ +.+|++++.|+.|++||+.++..+..+..|.. .+..++|+|
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~--~v~~~~~~~ 238 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS--NVSFAVFHP 238 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS--CEEEEEECS
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcC
Confidence 99999999999988888887655 788999885 56999999999999999988877776665544 589999988
Q ss_pred CCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 366 DSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 366 ~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
+++ +|++++.||.|++||+.+++
T Consensus 239 ~~~---~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 239 TLP---IIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp SSS---EEEEEETTSCEEEEETTTCS
T ss_pred CCC---EEEEEeCCCeEEEEECCCCc
Confidence 766 99999999999999998765
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.3e-28 Score=247.95 Aligned_cols=277 Identities=10% Similarity=0.113 Sum_probs=214.2
Q ss_pred ceeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe
Q 016224 106 AVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ 183 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~ 183 (393)
..|...|+|++|++++ +++|+.||.|+||+..+. +....+. |...|.+|+|+| +++|++++.|++|+|||+.+++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~-~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV-EVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC-EEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc-EEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 3567799999999874 567999999999999876 6655554 889999999999 8899999999999999999999
Q ss_pred EEEEEecCCceEEEE--eCCCEEEEE-cCCeEEEEECCCCcee------------eecCCCCcEEEEEEeCC---EEEEE
Q 016224 184 CAGVINLGGEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTDL------------SLSGPVGQVYAMAVGND---LLFAG 245 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~~------------~~~~~~~~v~~l~~~~~---~l~~~ 245 (393)
++..+.....+.++. +++.+++++ .|+.|++||+.+++.. .+.+|...|.+++|+|+ .|+++
T Consensus 91 ~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 91 VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 999888777776655 578888876 7899999999988753 23568899999999995 89999
Q ss_pred eCCCcEEEEEeccCCccccCceeecC------------------ceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcce
Q 016224 246 TQDGAILAWKFNVTTNCFEPAASLKG------------------HSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQC 305 (393)
Q Consensus 246 ~~dg~I~vwd~~~~~~~~~~~~~~~~------------------~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~ 305 (393)
+.|+.| +||++... ....+.. |...|.+++|+ +.+|++++.|++|++||++++++
T Consensus 171 ~~dg~v-lWd~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 171 YEYVTL-TYSLVENE----IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp CSSCEE-EEETTTTE----EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred eCCCcE-EEECCCCc----eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 999999 99998763 3333333 45779999996 56999999999999999999887
Q ss_pred eeE--ec---c-------------CccceEEEEEc----C---CEEEEEeCC-----CcEEEEEcCC-------------
Q 016224 306 IQT--LT---E-------------HTSVVMSLLCW----D---QFLLSCSLD-----KTIKVWFATD------------- 342 (393)
Q Consensus 306 ~~~--~~---~-------------~~~~v~~l~~~----~---~~l~s~s~d-----g~i~iwd~~~------------- 342 (393)
+.. +. . |...|.+++|. + .+|++|+.| ..+.+|++..
T Consensus 246 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~ 325 (902)
T 2oaj_A 246 IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMK 325 (902)
T ss_dssp EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHH
T ss_pred EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhh
Confidence 653 31 2 34579999994 2 467777666 3799998521
Q ss_pred -----CcceEEEEeecCCccEEEEEeeeC-C------CCCcEEEEEeCCCeEEEEeCCcee
Q 016224 343 -----SGNLEVTYTHNEEHGVLALCGMPD-S------EGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 343 -----~~~~~~~~~~~~~~~v~~~~~~~~-~------~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
... ...........+..+.+.++ . .+...+++++.||.|++|++.++.
T Consensus 326 ~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~ 385 (902)
T 2oaj_A 326 NYYANPKQ-MKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGI 385 (902)
T ss_dssp HHHHSCSE-EEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCC
T ss_pred hhhcCccc-eEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCC
Confidence 111 22222222345778887662 1 233478889999999999998764
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.5e-29 Score=240.62 Aligned_cols=240 Identities=12% Similarity=0.223 Sum_probs=186.2
Q ss_pred CCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe-----------EEEEEecCC-------------ceEE--EEeCC
Q 016224 148 GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ-----------CAGVINLGG-------------EVGC--MISEG 201 (393)
Q Consensus 148 ~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~-----------~~~~~~~~~-------------~~~~--~~~~~ 201 (393)
.|.+.|++++|+|++++||+|+.||.|+|||+.+++ ....+..+. .+.+ +.+++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 378999999999999999999999999999998876 466666552 3433 33454
Q ss_pred --CEEE-EEcCCeEEEEECCCCcee-----------------------------------------eecCCCCcEEEEEE
Q 016224 202 --PWIF-IGVTNFVKAWNTQTNTDL-----------------------------------------SLSGPVGQVYAMAV 237 (393)
Q Consensus 202 --~~l~-~~~~~~i~v~d~~~~~~~-----------------------------------------~~~~~~~~v~~l~~ 237 (393)
..++ ++.|+.|++|++.++... ...+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 4444 568999999998764431 13679999999999
Q ss_pred eCC--EEEEEeCCCcEEEEEeccCCccccC----ceeecCceeeEEEEEEcC---CEEEEecCCCcEEEeeCCCcce---
Q 016224 238 GND--LLFAGTQDGAILAWKFNVTTNCFEP----AASLKGHSLAVVSLVVGA---NKLYSGSMDNSIRVWNLETLQC--- 305 (393)
Q Consensus 238 ~~~--~l~~~~~dg~I~vwd~~~~~~~~~~----~~~~~~~~~~v~~l~~~~---~~l~sg~~dg~i~iwd~~~~~~--- 305 (393)
+++ +|+++ .|+.|++||++........ ...+.+|...|.+++|++ ++|++++.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 998 88888 8999999999854321110 013567899999999973 6899999999999999999887
Q ss_pred -eeEeccCcc------------ceEEEEEc--CCEEEEEeCCCcEEEEEcCC-CcceEEEEeecCCcc------------
Q 016224 306 -IQTLTEHTS------------VVMSLLCW--DQFLLSCSLDKTIKVWFATD-SGNLEVTYTHNEEHG------------ 357 (393)
Q Consensus 306 -~~~~~~~~~------------~v~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~------------ 357 (393)
+..+..|.. .|.+++|+ +++|++++. +.|+|||++. ...+..+..|.....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 788888876 89999998 679999998 9999999987 666666666543211
Q ss_pred -EEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 358 -VLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 358 -v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+..++|+|++. +|++++.||.|++||+.++++
T Consensus 344 ~~~~~~~s~~~~---~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 344 DKFECCWNGSDS---VVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp CCCCEEECTTSS---EEEEECSTTEEEEEETTTCCE
T ss_pred cceEEEECCCCC---EEEEeccCCEEEEEEcCCCcc
Confidence 33488887765 999999999999999998754
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.3e-28 Score=233.68 Aligned_cols=254 Identities=16% Similarity=0.254 Sum_probs=201.9
Q ss_pred ccceeecceEEeeEecC---cEEEecCCCeEEEEECCCC---------cEEEEEecCCcCCEEEEEecCCCC-EEEEEeC
Q 016224 104 NRAVIKTDILCRNWVQG---NCMYGEKCKFLHSWTVGDG---------FKLLTQLEGHQKVVSGITLPSGSD-KLYSGSK 170 (393)
Q Consensus 104 ~~~~~~~~i~c~~~~~~---~~~~g~~dg~i~vwd~~~~---------~~~~~~l~~h~~~I~~i~~s~~~~-~l~s~s~ 170 (393)
....|...|.+++|+++ .+++++.+|.|++|++.+. .+.+..+.+|...|++|+|+|++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34567889999999986 3557899999999999761 367788899999999999999988 9999999
Q ss_pred CCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeC
Q 016224 171 DETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQ 247 (393)
Q Consensus 171 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~ 247 (393)
||+|++||+.++...... . .....+..|...|.+++|+++ +|++++.
T Consensus 203 dg~i~vwd~~~~~~~~~~--------------------------~----~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 252 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRV--------------------------I----DAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 252 (430)
T ss_dssp TSCEEEEETTSCCBGGGE--------------------------E----ECSEEECCCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCeEEEEeCCCCCCCCce--------------------------e----ccceeecCCCCCEeeeEEeCCCCCEEEEEeC
Confidence 999999999874321000 0 001244578899999999883 8999999
Q ss_pred CCcEEEEEeccCCccccCceeecCceeeEEEEEEcC--C-EEEEecCCCcEEEeeCCC-cceeeEeccCccceEEEEEc-
Q 016224 248 DGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA--N-KLYSGSMDNSIRVWNLET-LQCIQTLTEHTSVVMSLLCW- 322 (393)
Q Consensus 248 dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~-~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~- 322 (393)
|+.|++||++.... ......+..|...|.+++|++ . +|++|+.||.|++||+++ .+++..+..|...|.++.|+
T Consensus 253 dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 253 DQKLMIWDTRNNNT-SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp TSEEEEEETTCSCS-SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred CCeEEEEECCCCCC-CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence 99999999997632 145566778999999999974 3 799999999999999998 56789999999999999998
Q ss_pred -C-CEEEEEeCCCcEEEEEcCCCcc-----------eEEEEe-ecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 323 -D-QFLLSCSLDKTIKVWFATDSGN-----------LEVTYT-HNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 323 -~-~~l~s~s~dg~i~iwd~~~~~~-----------~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+ .+|++++.|+.|+|||+..... ...+.. ..+...+..++|+|+.+ .+|++++.||.|+||++.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP--WIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSST--TEEEEEETTSEEEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCC--CEEEEEECCCCEEEeEcc
Confidence 3 4799999999999999976321 012222 22334599999988644 389999999999999987
Q ss_pred ce
Q 016224 389 SV 390 (393)
Q Consensus 389 s~ 390 (393)
..
T Consensus 410 ~~ 411 (430)
T 2xyi_A 410 EN 411 (430)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-29 Score=253.12 Aligned_cols=244 Identities=19% Similarity=0.209 Sum_probs=200.4
Q ss_pred ceeecceEEeeEecCc--EEEecCCCeEEEEECCCC-cEEEEEecCCcCCEEEEEecCC--CCEEEEEeCCCcEEEEECC
Q 016224 106 AVIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPSG--SDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~-~~~~~~l~~h~~~I~~i~~s~~--~~~l~s~s~dg~v~iwd~~ 180 (393)
..|..+|+|++|++++ +++|+.||.|+|||+.++ .+.+..+.+|...|++++|+++ +++|++|+.||+|++||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 4577899999999764 678999999999998732 3778899999999999999987 9999999999999999998
Q ss_pred CCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC----EEEEEeCCCcEEEEEe
Q 016224 181 SGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND----LLFAGTQDGAILAWKF 256 (393)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~----~l~~~~~dg~I~vwd~ 256 (393)
+++.... ..+..|...|.+++|+|+ .+++++.||.|++||+
T Consensus 86 ~~~~~~~-----------------------------------~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 86 NGRWSQI-----------------------------------AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp TTEEEEE-----------------------------------EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CCccccc-----------------------------------ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 8753221 134578899999999874 8999999999999999
Q ss_pred ccCCccccCceeecCceeeEEEEEEcC---------------CEEEEecCCCcEEEeeCCCc----ceeeEeccCccceE
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVVGA---------------NKLYSGSMDNSIRVWNLETL----QCIQTLTEHTSVVM 317 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~---------------~~l~sg~~dg~i~iwd~~~~----~~~~~~~~~~~~v~ 317 (393)
+.... .....+..|...|.++.+++ .+|++|+.||.|++||++++ .++..+.+|...|.
T Consensus 131 ~~~~~--~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 131 KENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp CSSSC--CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred ecCCC--cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEE
Confidence 87643 33456678899999999864 58999999999999999876 56778889999999
Q ss_pred EEEEc-----CCEEEEEeCCCcEEEEEcCCCcce---EEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 318 SLLCW-----DQFLLSCSLDKTIKVWFATDSGNL---EVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 318 ~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+++|+ +.+|++++.||.|++||+.+.... ...........+.+++|+|++. +|++++.||.|++|++.+
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~---~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC---CEEEECSSSCEECCBCCS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC---EEEEEcCCCEEEEEecCC
Confidence 99998 458999999999999999876421 1111222345688899988765 899999999999999984
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=7.3e-29 Score=232.57 Aligned_cols=260 Identities=15% Similarity=0.191 Sum_probs=201.3
Q ss_pred CCeEEEEECCCCcEEEEEecCCcCCEEEEEecC-CCCEEEEEeCCCcEEEEECCCCeEEEEEe--------------cCC
Q 016224 128 CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCASGQCAGVIN--------------LGG 192 (393)
Q Consensus 128 dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--------------~~~ 192 (393)
+..+++|+.+.+ +....+.+|.+.|++++|+| ++++|++++.||.|++||+.+++....+. +..
T Consensus 22 ~~~~~v~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 22 ESTRRVLGLELN-KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHTEEEC-TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred cCcceeeccccC-cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 445677887766 56678889999999999999 99999999999999999999876555443 444
Q ss_pred ceEEEE--e-CCCEEEE-EcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC-----EEEEEeCCCcEEEEEeccCCccc
Q 016224 193 EVGCMI--S-EGPWIFI-GVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-----LLFAGTQDGAILAWKFNVTTNCF 263 (393)
Q Consensus 193 ~~~~~~--~-~~~~l~~-~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~-----~l~~~~~dg~I~vwd~~~~~~~~ 263 (393)
.+.++. + ++.++++ +.++.|++||+.+++......+...+.++.+.+. ++++++.|+.|++||++..
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---- 176 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG---- 176 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS----
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc----
Confidence 555544 3 4555555 5799999999999998876678889999999763 8999999999999999876
Q ss_pred cCceeecCceeeEEEEEEcC--C-EEEEecCCCcEEEeeCCCcc-eeeEe---------------ccCccceEEEEEc--
Q 016224 264 EPAASLKGHSLAVVSLVVGA--N-KLYSGSMDNSIRVWNLETLQ-CIQTL---------------TEHTSVVMSLLCW-- 322 (393)
Q Consensus 264 ~~~~~~~~~~~~v~~l~~~~--~-~l~sg~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~v~~l~~~-- 322 (393)
+....+..|...|.++++++ . +|++++.|+.|++||++++. ++..+ ..|...|.+++|+
T Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 177 SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 55677888999999999974 3 69999999999999998765 44444 5788999999998
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 323 DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 323 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+++|++++.|+.|++||+.+++.......+........+.+.........+++++.|+.|++||+.++++
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc
Confidence 6799999999999999998876654433322111111122222222233577778899999999988754
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1.8e-26 Score=215.75 Aligned_cols=257 Identities=12% Similarity=0.100 Sum_probs=205.1
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEE-EEEeCCCcEEEEECCCCeEEEEEecCCceEEEE--
Q 016224 122 CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKL-YSGSKDETVRVWDCASGQCAGVINLGGEVGCMI-- 198 (393)
Q Consensus 122 ~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-- 198 (393)
+++++.|+.|++||+.++ +.+..+..|. .+.+++|+|++++| ++++.|++|++||+.+++.+..+..+..+..+.
T Consensus 5 ~vs~~~d~~v~v~d~~~~-~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 82 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSN-KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS 82 (391)
T ss_dssp EEEETTTTEEEEEETTTT-EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EEEcCCCCEEEEEECCCC-eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEEC
Confidence 457889999999999998 8888888775 48999999999987 677789999999999999999998877665543
Q ss_pred eCCCEEEE-E-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EE-EEEeCCCcEEEEEeccCCccccCceeecCce
Q 016224 199 SEGPWIFI-G-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LL-FAGTQDGAILAWKFNVTTNCFEPAASLKGHS 273 (393)
Q Consensus 199 ~~~~~l~~-~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l-~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~ 273 (393)
++++.+++ + .++.|++||+.+++......+...+.+++|+++ .| ++++.++.|++||+.++ +....+..+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~~- 157 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK----AVINTVSVG- 157 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----EEEEEEECC-
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC----cEEEEEecC-
Confidence 57887754 4 458999999999988855556678999999988 44 78888999999999876 334444433
Q ss_pred eeEEEEEEc--CCEE-EEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEe---CCCcEEEEEcCCCcc
Q 016224 274 LAVVSLVVG--ANKL-YSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCS---LDKTIKVWFATDSGN 345 (393)
Q Consensus 274 ~~v~~l~~~--~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s---~dg~i~iwd~~~~~~ 345 (393)
..+..++++ +++| ++++.++.|++||+++++.+..+. +...+.+++++ +++|++++ .++.|++||+.+++.
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 345677775 5565 678889999999999998888776 45578888888 66888777 689999999988776
Q ss_pred eEEEEeecCCccEEEEEeeeCCCCCcEE-EEEeCCCeEEEEeCCceee
Q 016224 346 LEVTYTHNEEHGVLALCGMPDSEGKPVL-LCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 346 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~s~s~dg~I~iwd~~s~~l 392 (393)
+..+..+. .+..++|+|++. +| ++++.|+.|++||+.++++
T Consensus 237 ~~~~~~~~---~~~~~~~s~dg~---~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 237 TARIPVGP---DPAGIAVTPDGK---KVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEEECCS---SEEEEEECTTSS---EEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEecCC---CccEEEEccCCC---EEEEEcCCCCEEEEEECCCCcE
Confidence 65555432 477888888754 55 6778899999999998764
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.5e-28 Score=233.78 Aligned_cols=244 Identities=13% Similarity=0.191 Sum_probs=185.4
Q ss_pred EEEEEecCCcCCEEEEEecC-CCCEEEEEeCCCcEEEEECCCCeEEEEEe---cCCceEEEE--e-CCCEEEEE-cCCeE
Q 016224 141 KLLTQLEGHQKVVSGITLPS-GSDKLYSGSKDETVRVWDCASGQCAGVIN---LGGEVGCMI--S-EGPWIFIG-VTNFV 212 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~~~~~~--~-~~~~l~~~-~~~~i 212 (393)
+......+|...|++|+|+| ++++||+|+.||+|+|||+.+++....+. +...+.++. + ++.+|+++ .|++|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 33445667999999999999 56799999999999999998876555443 334555543 2 56777765 88999
Q ss_pred EEEECCCCceeeec---CCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC---C
Q 016224 213 KAWNTQTNTDLSLS---GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---N 284 (393)
Q Consensus 213 ~v~d~~~~~~~~~~---~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~ 284 (393)
++||++++....+. .+...+.+++|+++ +|++|+.||.|++||++. +.+..+.+|...|.+++|++ .
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-----~~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-----KELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-----CBCCCSBCCSSCEEEEEECTTCSS
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-----ceeEEEecccceEEeeeecCCCce
Confidence 99999887655333 33446788999987 999999999999999865 33566788999999999973 3
Q ss_pred EEEEecCCCcEEEeeCCCcceeeEe---ccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCC----
Q 016224 285 KLYSGSMDNSIRVWNLETLQCIQTL---TEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE---- 355 (393)
Q Consensus 285 ~l~sg~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---- 355 (393)
+|++++.|+.|++||+++.+....+ .+|...|.+++|+ +.+|++++.|+.|+|||+.+......+..+...
T Consensus 265 ~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSS
T ss_pred EEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccc
Confidence 7899999999999999987655443 5799999999998 679999999999999999988777666554321
Q ss_pred ccEEEEEeeeCCCCCcEEEEEe------------CCCeEEEEeCCceee
Q 016224 356 HGVLALCGMPDSEGKPVLLCSC------------NDNSVRFYDLPSVII 392 (393)
Q Consensus 356 ~~v~~~~~~~~~~~~~~l~s~s------------~dg~I~iwd~~s~~l 392 (393)
.......|+|... +++++. .++.|++||+.++++
T Consensus 345 ~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 345 LTPIKAAWHPRYN---LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp SCCCBCEECSSSS---CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred ceeEEEEEcCCCC---EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 1233344544432 344432 446899999998764
No 103
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-28 Score=238.83 Aligned_cols=233 Identities=10% Similarity=0.072 Sum_probs=180.0
Q ss_pred CcCCEEEEEecCCC---------CEEEE-------------------EeCCCcEEEEECCCCeEE----EEEec-CCceE
Q 016224 149 HQKVVSGITLPSGS---------DKLYS-------------------GSKDETVRVWDCASGQCA----GVINL-GGEVG 195 (393)
Q Consensus 149 h~~~I~~i~~s~~~---------~~l~s-------------------~s~dg~v~iwd~~~~~~~----~~~~~-~~~~~ 195 (393)
+.+.|.+|+|+|++ ++||+ ++.|++|+|||+.+++.. ..+.. ...+.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56677777777665 45554 567899999999877642 23333 34444
Q ss_pred EEE--eC------CCEEEE-EcCCeEEEEECCCCce------------eeecCCCCcEEEEEEeCC-EEEEEeCCCcEEE
Q 016224 196 CMI--SE------GPWIFI-GVTNFVKAWNTQTNTD------------LSLSGPVGQVYAMAVGND-LLFAGTQDGAILA 253 (393)
Q Consensus 196 ~~~--~~------~~~l~~-~~~~~i~v~d~~~~~~------------~~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~v 253 (393)
.+. ++ +.+|++ +.|++|++||+..+.. ..+.+|...|.+++|+++ .|++|+.||+|++
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~l 291 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAE 291 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEE
Confidence 433 33 457775 4889999999987642 256788999999999876 9999999999999
Q ss_pred EEeccCCccccCceeecCceeeEEEE--EEc--C-CEEEEecCCCcEEEeeCCCcceeeEeccCcc--ceEEEEEc--CC
Q 016224 254 WKFNVTTNCFEPAASLKGHSLAVVSL--VVG--A-NKLYSGSMDNSIRVWNLETLQCIQTLTEHTS--VVMSLLCW--DQ 324 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~v~~l--~~~--~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~l~~~--~~ 324 (393)
||++++. .+...+.+|...|.++ .+. + .+|++++.|++|+|||+++++++.++.+|.. .|.+++|+ ++
T Consensus 292 WD~~~~~---~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~ 368 (524)
T 2j04_B 292 FDLTDPE---VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY 368 (524)
T ss_dssp EETTBCS---SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT
T ss_pred EECCCCC---CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC
Confidence 9998753 3455678899999999 344 4 6899999999999999999998888877754 47888998 56
Q ss_pred EEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 325 FLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 325 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
.|++++.|++|++||+++...+..+..|.. .|.+++|+|+++ +|++|+.||+|++||+..
T Consensus 369 ~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~--~V~sva~Sp~g~---~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 369 SYIYSDGASSLRAVPSRAAFAVHPLVSRET--TITAIGVSRLHP---MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEEECSSSEEEEEETTCTTCCEEEEECSS--CEEEEECCSSCC---BCEEEETTTEEECCBSCS
T ss_pred eEEEeCCCCcEEEEECcccccceeeecCCC--ceEEEEeCCCCC---eEEEEECCCEEEEEechH
Confidence 899999999999999998887777776554 599999998766 899999999999999754
No 104
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=4.3e-29 Score=232.38 Aligned_cols=235 Identities=12% Similarity=0.065 Sum_probs=182.7
Q ss_pred ecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC--eEEEEEecC-CceEEE--EeCCCEEEEE-cCCeEEEEECCC
Q 016224 146 LEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG--QCAGVINLG-GEVGCM--ISEGPWIFIG-VTNFVKAWNTQT 219 (393)
Q Consensus 146 l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~--~~~~~~~~~-~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~ 219 (393)
++.|..+|++++|+|++++|++++.|+.|+|||+.++ +.+..+..+ ..+.++ .+++++|+++ .|+.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3446789999999999999999999999999999988 666666544 344444 3567777665 789999999998
Q ss_pred Cc----eeeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecC-ceeeEEEEEEc--CCEEEEec
Q 016224 220 NT----DLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKG-HSLAVVSLVVG--ANKLYSGS 290 (393)
Q Consensus 220 ~~----~~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~--~~~l~sg~ 290 (393)
+. ...+..|...|.+++|+++ +|++++.|+.|++||++.... ......+.. |...|.+++++ +++|++++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND-WWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc-ceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 87 4477889999999999987 899999999999999987642 124566666 99999999996 55899999
Q ss_pred CCCcEEEeeCC------------------CcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcc----e
Q 016224 291 MDNSIRVWNLE------------------TLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGN----L 346 (393)
Q Consensus 291 ~dg~i~iwd~~------------------~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~----~ 346 (393)
.|+.|++||++ .++++..+ .|...|.+++|+ +++|++++.|+.|++||+.+.+. +
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 99999999985 45677777 899999999998 67999999999999999998876 4
Q ss_pred EEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 347 EVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 347 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
..+..|. ..+.+++|+|++. +|++++.|+.+ +|+..
T Consensus 245 ~~~~~~~--~~v~~~~~s~~~~---~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 245 ITVKLSQ--LPLRSLLWANESA---IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CCEECSS--SCEEEEEEEETTE---EEEEESSSSEE-EECCC
T ss_pred EeecCCC--CceEEEEEcCCCC---EEEEEcCCcEE-EEEeC
Confidence 4555544 3599999999865 88888776665 66654
No 105
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=219.48 Aligned_cols=250 Identities=14% Similarity=0.179 Sum_probs=195.0
Q ss_pred EECCCCcEEEEEecCCcCCEEEEEecCC---CCEEEEEeCCCcEEEEECCC-CeEE-EEEec-CCceEEEE--eCCCEEE
Q 016224 134 WTVGDGFKLLTQLEGHQKVVSGITLPSG---SDKLYSGSKDETVRVWDCAS-GQCA-GVINL-GGEVGCMI--SEGPWIF 205 (393)
Q Consensus 134 wd~~~~~~~~~~l~~h~~~I~~i~~s~~---~~~l~s~s~dg~v~iwd~~~-~~~~-~~~~~-~~~~~~~~--~~~~~l~ 205 (393)
|+.... +.+..+.+|.+.|++|+|+|+ +++|++|+.||.|+|||+.+ ++.+ ..+.. ...+.++. +++.+|+
T Consensus 24 ~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPM-KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTT-CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCc-ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 344443 778889999999999999999 59999999999999999987 5544 44543 44554443 5777777
Q ss_pred EE-cCCeEEEEECCCCceeeecCCCCcEEEEEE--eCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEE
Q 016224 206 IG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAV--GND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLV 280 (393)
Q Consensus 206 ~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~--~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~ 280 (393)
++ .|+.|++||+.+++...+..|...|.+++| +++ +|++++.|+.|++||++.. +....+..+ ..+.++.
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~-~~~~~~~ 177 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS----NPMMVLQLP-ERCYCAD 177 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS----SCSEEEECS-SCEEEEE
T ss_pred EEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC----cEEEEEecC-CCceEEE
Confidence 65 789999999999998888899999999999 676 7999999999999999886 445555554 3677888
Q ss_pred EcCCEEEEecCCCcEEEeeCCCcceeeEe----ccCccceEEEEEcCC----EEEEEeCCCcEEEEEcCCC---cceEEE
Q 016224 281 VGANKLYSGSMDNSIRVWNLETLQCIQTL----TEHTSVVMSLLCWDQ----FLLSCSLDKTIKVWFATDS---GNLEVT 349 (393)
Q Consensus 281 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~l~~~~~----~l~s~s~dg~i~iwd~~~~---~~~~~~ 349 (393)
+.+..+++++.++.+++||++........ ..+...+.++..... .+++++.|+.|++||+... .....+
T Consensus 178 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 178 VIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp EETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE
T ss_pred ecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee
Confidence 88889999999999999999875443222 123334444444443 3999999999999999876 344555
Q ss_pred EeecCC----------ccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 350 YTHNEE----------HGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 350 ~~~~~~----------~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
..+... ..+.+++|+|++. +|++++.||.|++||+.++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~---~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHG---TLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTC---CEEEEETTSCEEEEETTTTEE
T ss_pred eeeecccccccccccccceEEEEEecCCC---EEEEEccCCeEEEEECCCCcE
Confidence 544331 1589999988765 899999999999999998764
No 106
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.1e-27 Score=214.45 Aligned_cols=249 Identities=12% Similarity=0.060 Sum_probs=178.6
Q ss_pred ceEEeeEec-C---cEEEecCCCeEEEEECCCC--cEEEEEecCCcCCEEEEEecC------------------------
Q 016224 111 DILCRNWVQ-G---NCMYGEKCKFLHSWTVGDG--FKLLTQLEGHQKVVSGITLPS------------------------ 160 (393)
Q Consensus 111 ~i~c~~~~~-~---~~~~g~~dg~i~vwd~~~~--~~~~~~l~~h~~~I~~i~~s~------------------------ 160 (393)
++.++.|-. + -++.......|++|+..++ ++++++++.|+.+|..|.+.|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 556666742 2 2666777889999999876 378889999887666666655
Q ss_pred -C----CCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEE---cCCeEEEEECCC-Ccee-eecCCCC
Q 016224 161 -G----SDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIG---VTNFVKAWNTQT-NTDL-SLSGPVG 230 (393)
Q Consensus 161 -~----~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~i~v~d~~~-~~~~-~~~~~~~ 230 (393)
+ ++++++++.+ +++|++ ++++++.++ .++.|++|++.. ++.+ .+..|..
T Consensus 121 pd~~~~~~~l~s~g~~--~~v~~l-------------------~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~ 179 (356)
T 2w18_A 121 SDDESEKQVLLKSGNI--KAVLGL-------------------TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPP 179 (356)
T ss_dssp -----CCEEEEEEEEE--EEEEEE-------------------TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCC
T ss_pred CCccccccEEEeCCCe--EEEEec-------------------CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCC
Confidence 4 4444444422 444443 344455554 488999999954 6554 6667777
Q ss_pred cEEEEEEeC-----CEEEEEeCCCcEEEEEeccCCccccCceeecCce---eeEEEEEE--cCCEE------------EE
Q 016224 231 QVYAMAVGN-----DLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHS---LAVVSLVV--GANKL------------YS 288 (393)
Q Consensus 231 ~v~~l~~~~-----~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~---~~v~~l~~--~~~~l------------~s 288 (393)
.+..++|++ ++|++++.|++|++||+.++ +.+..+.+|. ..+.+++| ++.++ ++
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG----k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG----QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC----CEEEEEECCC---CCCEEEEEEETTEEEEEEC----------
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECCCC----cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 777777776 39999999999999999987 5556665543 24444444 44444 67
Q ss_pred ecCCCcEEEeeCCCcceeeEe-----ccCccceEEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEe
Q 016224 289 GSMDNSIRVWNLETLQCIQTL-----TEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCG 363 (393)
Q Consensus 289 g~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 363 (393)
|+.|++|++||..+++.+..+ .+|...+.+..+++.++++++.|++|+|||+.+++.+..+..|... .+..++|
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~-vvs~vaf 334 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ-HWSFVKW 334 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--C-CCCEEEE
T ss_pred cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC-eEEEEEE
Confidence 889999999999999988766 4677667777777889999999999999999999888887665543 2335789
Q ss_pred eeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 364 MPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 364 ~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+|++. +|++|+.|++|+|||+.
T Consensus 335 SPDG~---~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 335 SGTDS---HLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CSSSS---EEEEECTTSCEEEEEEC
T ss_pred CCCCC---EEEEEECCCcEEEecCC
Confidence 88766 99999999999999963
No 107
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=7.7e-27 Score=220.83 Aligned_cols=235 Identities=22% Similarity=0.313 Sum_probs=187.0
Q ss_pred eeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC-e
Q 016224 107 VIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-Q 183 (393)
Q Consensus 107 ~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~-~ 183 (393)
.|...|+|++|++++ +++|+.|+.|+|||+.++ +.+..+.+|...|.+++++ +.+|++|+.|+.+++||.... .
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~-~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC-cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce
Confidence 455689999999873 567999999999999998 8999999999999998875 679999999999999998864 4
Q ss_pred EEEEEecCCc-eEE--EEeCCCEEEEE-cCCeEEEEECCCCce-----eeecCCCCcEEEEEEeCC---EEEE--EeCCC
Q 016224 184 CAGVINLGGE-VGC--MISEGPWIFIG-VTNFVKAWNTQTNTD-----LSLSGPVGQVYAMAVGND---LLFA--GTQDG 249 (393)
Q Consensus 184 ~~~~~~~~~~-~~~--~~~~~~~l~~~-~~~~i~v~d~~~~~~-----~~~~~~~~~v~~l~~~~~---~l~~--~~~dg 249 (393)
.+..+..+.. +.. +.+++.+++++ .|+.+++|+..+++. .....|...|.+++|+|. ++++ |+.|+
T Consensus 222 ~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 222 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence 4555554433 322 23577777765 889999999987653 256788999999999886 5555 45799
Q ss_pred cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEe--cCCCcEEEeeCCCcceeeEeccCccceEEEEEc--C
Q 016224 250 AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSG--SMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--D 323 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg--~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~ 323 (393)
.|++||+.++ .....+..| ..+.++.+. ++.++++ +.|+.|+|||+.+++++.++.+|...|++++|+ +
T Consensus 302 ~I~iwd~~t~----~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg 376 (420)
T 4gga_A 302 HIRIWNVCSG----ACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 376 (420)
T ss_dssp EEEEEETTTT----EEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEeCCcc----ccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 9999999887 444455444 456666664 5566654 479999999999999999999999999999998 6
Q ss_pred CEEEEEeCCCcEEEEEcCCCcceEEE
Q 016224 324 QFLLSCSLDKTIKVWFATDSGNLEVT 349 (393)
Q Consensus 324 ~~l~s~s~dg~i~iwd~~~~~~~~~~ 349 (393)
++|+||+.|++|+|||+.+.......
T Consensus 377 ~~l~S~s~D~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFELDPARRR 402 (420)
T ss_dssp SCEEEEETTTEEEEECCSCSSCC---
T ss_pred CEEEEEecCCeEEEEECCCCCccchh
Confidence 79999999999999999766554443
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=4.1e-27 Score=221.33 Aligned_cols=237 Identities=20% Similarity=0.344 Sum_probs=195.7
Q ss_pred EEecCCcCC--EEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEec--CCceEEEE--eCCCEEEEE-cCCeEEEEE
Q 016224 144 TQLEGHQKV--VSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL--GGEVGCMI--SEGPWIFIG-VTNFVKAWN 216 (393)
Q Consensus 144 ~~l~~h~~~--I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~--~~~~~~~~--~~~~~l~~~-~~~~i~v~d 216 (393)
....+|... +.+++|++ ..+++++.|+.|++||+.+++....+.. ...+.++. +++.+|+++ .++.|++||
T Consensus 85 ~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp EECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 344556554 45566664 5688899999999999999998888776 34454443 578888876 789999999
Q ss_pred CCCCcee-eecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCC
Q 016224 217 TQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDN 293 (393)
Q Consensus 217 ~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg 293 (393)
+.+++.+ .+..|...|.+++|++++|++++.||.|++||++... .....+..|...|.+++++ +++|++++.|+
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIAN---HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS---CEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCc---ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 9998877 7779999999999999999999999999999998543 4566778899999999996 56999999999
Q ss_pred cEEEeeCCCcceeeEeccCccceEEEEEcC---CEEEEEe--CCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCC
Q 016224 294 SIRVWNLETLQCIQTLTEHTSVVMSLLCWD---QFLLSCS--LDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSE 368 (393)
Q Consensus 294 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~---~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 368 (393)
.|++||+++++++..+..|...|.+++|++ .++++++ .|+.|++||+.+++.+..+. ....+.+++|+|++.
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~---~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD---AGSQVTSLIWSPHSK 316 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE---CSSCEEEEEECSSSS
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe---CCCcEEEEEECCCCC
Confidence 999999999999999999999999999983 5777765 79999999999887666553 234599999988766
Q ss_pred CCcEEEEE--eCCCeEEEEeCCcee
Q 016224 369 GKPVLLCS--CNDNSVRFYDLPSVI 391 (393)
Q Consensus 369 ~~~~l~s~--s~dg~I~iwd~~s~~ 391 (393)
+|+++ +.||.|++||+++++
T Consensus 317 ---~l~~~~g~~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 317 ---EIMSTHGFPDNNLSIWSYSSSG 338 (401)
T ss_dssp ---EEEEEECTTTCEEEEEEEETTE
T ss_pred ---eEEEEeecCCCcEEEEecCCcc
Confidence 78884 489999999998753
No 109
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.7e-28 Score=223.36 Aligned_cols=206 Identities=19% Similarity=0.238 Sum_probs=161.8
Q ss_pred EecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceee
Q 016224 145 QLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLS 224 (393)
Q Consensus 145 ~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~ 224 (393)
.+.+|...|++++|+|++++|++|+.|++|+|||+.+++.... ..
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~-----------------------------------~~ 52 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILI-----------------------------------AD 52 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEE-----------------------------------EE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEE-----------------------------------EE
Confidence 5578999999999999999999999999999999987643211 13
Q ss_pred ecCCCCcEEEEEEeC----CEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC----CEEEEecCCCcEE
Q 016224 225 LSGPVGQVYAMAVGN----DLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA----NKLYSGSMDNSIR 296 (393)
Q Consensus 225 ~~~~~~~v~~l~~~~----~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~l~sg~~dg~i~ 296 (393)
+.+|...|.+++|++ ++|++++.|++|++||++.+.. .....+.+|...|.+++|++ .+|++++.|++|+
T Consensus 53 l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~--~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW--EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC--CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc--eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 568999999999964 3999999999999999986531 34456778999999999964 4899999999999
Q ss_pred EeeCCCcc---eeeEeccCccceEEEEEcC-------------------CEEEEEeCCCcEEEEEcCCCcc---eEEEEe
Q 016224 297 VWNLETLQ---CIQTLTEHTSVVMSLLCWD-------------------QFLLSCSLDKTIKVWFATDSGN---LEVTYT 351 (393)
Q Consensus 297 iwd~~~~~---~~~~~~~~~~~v~~l~~~~-------------------~~l~s~s~dg~i~iwd~~~~~~---~~~~~~ 351 (393)
+||+++.. ....+.+|...+.++.|++ ++|++++.|++|++||++.... ...+..
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~ 210 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA 210 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC
T ss_pred EEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc
Confidence 99998753 2456678999999999874 4799999999999999975532 222333
Q ss_pred ecCCccEEEEEeeeCCC-CCcEEEEEeCCCeEEEEeCCc
Q 016224 352 HNEEHGVLALCGMPDSE-GKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 352 ~~~~~~v~~~~~~~~~~-~~~~l~s~s~dg~I~iwd~~s 389 (393)
| ...|.+++|+|+.. +..+|++++.|++|++|++.+
T Consensus 211 h--~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 211 H--SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp C--SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred C--CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 3 34699999999751 234899999999999999876
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=219.66 Aligned_cols=253 Identities=10% Similarity=0.058 Sum_probs=189.7
Q ss_pred cCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECC---------CCeEEEEEe
Q 016224 119 QGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA---------SGQCAGVIN 189 (393)
Q Consensus 119 ~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~---------~~~~~~~~~ 189 (393)
...+++|+.||.|++||+.++ +.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+.
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~-~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDS-KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSS-SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCcEEEEECCCC-cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 335678999999999999988 6666665 567888889888 9999999999999665 555555555
Q ss_pred cC--CceEEEE--e--CCCEEEE-EcCCeEEEEECCCCceeee--cCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEecc
Q 016224 190 LG--GEVGCMI--S--EGPWIFI-GVTNFVKAWNTQTNTDLSL--SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNV 258 (393)
Q Consensus 190 ~~--~~~~~~~--~--~~~~l~~-~~~~~i~v~d~~~~~~~~~--~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~ 258 (393)
.. ..+.++. + ++.++++ +.|+.|++||+++++.... ..+...|.+++|+|+ +|++|+.||.|++||+++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 33 3455544 4 6777775 4889999999999988633 345668999999998 999999999999999998
Q ss_pred CCccccCc-eeecC-ceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEecc---CccceE--EEEEc--CCEEE
Q 016224 259 TTNCFEPA-ASLKG-HSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTE---HTSVVM--SLLCW--DQFLL 327 (393)
Q Consensus 259 ~~~~~~~~-~~~~~-~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~---~~~~v~--~l~~~--~~~l~ 327 (393)
.. .. ..+.. |...|.+++|+ +.+|++++ |+.|++||+++++.+..+.. |...+. +++|+ +++|+
T Consensus 202 ~~----~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 202 PD----QASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp TT----SCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred CC----CCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 74 33 55666 99999999996 45899998 55999999999887666554 434443 58887 78999
Q ss_pred EEeC-CCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 328 SCSL-DKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 328 s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+++. |+.|+||++.+....... ..+..+.|.+...+...|++++.||.+.++-..
T Consensus 277 ~~s~~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKKTKNWTK------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEETTTTEEEEEEECTTTCSEEE------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred EecCCCCcEEEEEEcccccceEe------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 9998 999999999765543332 246677777744455589999999999887543
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=2.1e-27 Score=222.71 Aligned_cols=226 Identities=12% Similarity=0.110 Sum_probs=158.3
Q ss_pred cEEEecCCCeEEEEECCCCcE----EEEEecCCcCCEEEEEecC--------CCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 121 NCMYGEKCKFLHSWTVGDGFK----LLTQLEGHQKVVSGITLPS--------GSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 121 ~~~~g~~dg~i~vwd~~~~~~----~~~~l~~h~~~I~~i~~s~--------~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
.+++|+.|++|+|||+.++.. .+..+.+|.+.|.+|+|+| |+++|||++.|++|+|||+.++..+..
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~- 181 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA- 181 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE-
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee-
Confidence 356799999999999987722 2334689999999999987 789999999999999999987765433
Q ss_pred ecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEeccCCccccC
Q 016224 189 NLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEP 265 (393)
Q Consensus 189 ~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~~~ 265 (393)
+..|...|.+++|+|+ +|++++.|++|++||++++......
T Consensus 182 ------------------------------------~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 182 ------------------------------------GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp ------------------------------------EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred ------------------------------------ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc
Confidence 3456778889999986 7889999999999998775432111
Q ss_pred c---------------------eeecCceeeEEEEEE---cCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEE
Q 016224 266 A---------------------ASLKGHSLAVVSLVV---GANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLC 321 (393)
Q Consensus 266 ~---------------------~~~~~~~~~v~~l~~---~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 321 (393)
. ....+|...+.++.+ ++.+|++++.|+++++||+.+++....+..|...+..+.+
T Consensus 226 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~ 305 (393)
T 4gq1_A 226 SQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNL 305 (393)
T ss_dssp -----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CC
T ss_pred cccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEE
Confidence 1 112356667777776 4679999999999999999988877777666554433322
Q ss_pred ------------------c----CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCC
Q 016224 322 ------------------W----DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCND 379 (393)
Q Consensus 322 ------------------~----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~d 379 (393)
. +.++++|+.|++|+|||+.++........+.. .|.+++|+|++. +|++++.|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~--~V~svafspdG~---~LA~as~~ 380 (393)
T 4gq1_A 306 LPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM--PIVDFCWHQDGS---HLAIATEG 380 (393)
T ss_dssp SCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS--CEEEEEECTTSS---EEEEEESS
T ss_pred ccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC--cEEEEEEcCCCC---EEEEEeCC
Confidence 2 22677888999999999998887777666554 599999998876 99999876
Q ss_pred CeEEEEeCCc
Q 016224 380 NSVRFYDLPS 389 (393)
Q Consensus 380 g~I~iwd~~s 389 (393)
| +.+|.+..
T Consensus 381 G-v~lvrL~g 389 (393)
T 4gq1_A 381 S-VLLTRLMG 389 (393)
T ss_dssp E-EEEEEEGG
T ss_pred C-eEEEEEeC
Confidence 6 66666543
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.7e-25 Score=211.93 Aligned_cols=267 Identities=13% Similarity=0.142 Sum_probs=209.6
Q ss_pred cceEEeeEecCcE--EEecCCCeEEEEECCCCcEEEE-----EecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 016224 110 TDILCRNWVQGNC--MYGEKCKFLHSWTVGDGFKLLT-----QLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG 182 (393)
Q Consensus 110 ~~i~c~~~~~~~~--~~g~~dg~i~vwd~~~~~~~~~-----~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~ 182 (393)
..+.++.|++++. ++++.++.|++||+.++ +.+. .+.+|...|.+++|+++++++++++.|+.|++||++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG-QTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTC-CEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCC-eEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 3566899987643 34677889999999988 6666 45589999999999999999999999999999999999
Q ss_pred eEEEEEecCC-ceE--EEEeCCCEEE-EE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EEEEEe--------C
Q 016224 183 QCAGVINLGG-EVG--CMISEGPWIF-IG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGT--------Q 247 (393)
Q Consensus 183 ~~~~~~~~~~-~~~--~~~~~~~~l~-~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~--------~ 247 (393)
+.+..+..+. .+. .+.+++..++ ++ .++.|++||+.+++..........+.+++|+++ .|++++ .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccC
Confidence 9888887443 333 3446777775 45 578999999999988766566677999999987 777776 5
Q ss_pred CCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CC-EEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--
Q 016224 248 DGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--AN-KLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW-- 322 (393)
Q Consensus 248 dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-- 322 (393)
|+.|++||+.++. .... ..|...+..++++ ++ ++++++.|+.|++||+++++.+..+. +...+.+++++
T Consensus 282 dg~i~~~d~~~~~----~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~d 355 (433)
T 3bws_A 282 GGRLGIYSMDKEK----LIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPD 355 (433)
T ss_dssp CEEEEEEETTTTE----EEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTT
T ss_pred CCeEEEEECCCCc----EEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCC
Confidence 8899999998763 2222 2455677778886 44 45777899999999999999888876 66778899998
Q ss_pred CCEEEEEeC---------------CCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC-CCeEEEEe
Q 016224 323 DQFLLSCSL---------------DKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN-DNSVRFYD 386 (393)
Q Consensus 323 ~~~l~s~s~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~-dg~I~iwd 386 (393)
+++|++++. ||.|++||+.+++.+..+.. ...+..++|+|++. +|++++. |+.|++|+
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~---~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPDNR---YLVISDFLDHQIRVYR 429 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSC---EEEEEETTTTEEEEEE
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCCCC---EEEEEECCCCeEEEEE
Confidence 567887776 57999999988776665544 33588999988755 7777764 99999999
Q ss_pred CCc
Q 016224 387 LPS 389 (393)
Q Consensus 387 ~~s 389 (393)
+..
T Consensus 430 ~~~ 432 (433)
T 3bws_A 430 RDG 432 (433)
T ss_dssp ETT
T ss_pred ecC
Confidence 875
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.9e-25 Score=202.29 Aligned_cols=229 Identities=22% Similarity=0.297 Sum_probs=181.5
Q ss_pred eeecceEEeeEecC--cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe-
Q 016224 107 VIKTDILCRNWVQG--NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ- 183 (393)
Q Consensus 107 ~~~~~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~- 183 (393)
.|...|+|++|+++ .+++|+.|++|++||+.++ +.+..+.+|...+.++.+. +.+|++++.++.+++|+.....
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~-~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc-eeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCce
Confidence 46668999999986 3668999999999999999 8999999999999876654 6799999999999999988764
Q ss_pred EEEEEecCC-ceEEE--EeCCCEEEEE-cCCeEEEEECCCCcee-----eecCCCCcEEEEEEeCC-----EEEEEeCCC
Q 016224 184 CAGVINLGG-EVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDL-----SLSGPVGQVYAMAVGND-----LLFAGTQDG 249 (393)
Q Consensus 184 ~~~~~~~~~-~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~-----~~~~~~~~v~~l~~~~~-----~l~~~~~dg 249 (393)
.+..+..+. .+... ..++.+++++ .|+.|++||+.+++.. ....+...|.++.+.+. .+++++.++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 221 (318)
T 4ggc_A 142 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR 221 (318)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTC
T ss_pred eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCC
Confidence 444444433 33333 3577777765 8899999999887532 55678889999999876 345677899
Q ss_pred cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEE--ecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--C
Q 016224 250 AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYS--GSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--D 323 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s--g~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~ 323 (393)
.|++||...... .....+...+..+.+. ++.+++ ++.|+.|++||+++++++.++.+|...|++++|+ +
T Consensus 222 ~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg 296 (318)
T 4ggc_A 222 HIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 296 (318)
T ss_dssp EEEEEETTTCCE-----EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEecccccc-----cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 999999887532 2223345556666664 555554 4589999999999999999999999999999998 6
Q ss_pred CEEEEEeCCCcEEEEEcCCC
Q 016224 324 QFLLSCSLDKTIKVWFATDS 343 (393)
Q Consensus 324 ~~l~s~s~dg~i~iwd~~~~ 343 (393)
++|++|+.|++|+|||+.+.
T Consensus 297 ~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEETTTEEEEECCSCC
T ss_pred CEEEEEecCCeEEEEECCCC
Confidence 79999999999999999754
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-26 Score=211.59 Aligned_cols=213 Identities=17% Similarity=0.194 Sum_probs=170.7
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCC
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTN 220 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~ 220 (393)
+++..+.+|...|++++|+|++++|++++.||.|+|||+........
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~--------------------------------- 48 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI--------------------------------- 48 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE---------------------------------
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceee---------------------------------
Confidence 45667889999999999999999999999999999999874332111
Q ss_pred ceeeecCCCCcEEEEEEeC----CEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc----CCEEEEecCC
Q 016224 221 TDLSLSGPVGQVYAMAVGN----DLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG----ANKLYSGSMD 292 (393)
Q Consensus 221 ~~~~~~~~~~~v~~l~~~~----~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~sg~~d 292 (393)
..+..|...|.+++|++ ++|++++.||.|++||+..+.. .....+..|...|.+++|+ +++|++++.|
T Consensus 49 --~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 49 --DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp --EEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred --eEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce--eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 13467889999999973 4999999999999999988631 3566777899999999996 5589999999
Q ss_pred CcEEEeeCCCcc--eeeEeccCccceEEEEEcC---------------CEEEEEeCCCcEEEEEcCCCcceEEEE--eec
Q 016224 293 NSIRVWNLETLQ--CIQTLTEHTSVVMSLLCWD---------------QFLLSCSLDKTIKVWFATDSGNLEVTY--THN 353 (393)
Q Consensus 293 g~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~---------------~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~ 353 (393)
+.|++||+++.. ....+..|...|.++.|++ .+|++++.|+.|++||+++........ ...
T Consensus 125 ~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 125 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 999999998873 4456678999999999974 689999999999999998765432221 122
Q ss_pred CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 354 EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 354 ~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
+...+.+++|+|+...+.+|++++.||.|++||+.++
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 3456999999988322349999999999999999875
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.1e-25 Score=214.87 Aligned_cols=234 Identities=12% Similarity=0.123 Sum_probs=187.7
Q ss_pred cCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe---EEEEEecCC----------------------------------
Q 016224 150 QKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ---CAGVINLGG---------------------------------- 192 (393)
Q Consensus 150 ~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~---~~~~~~~~~---------------------------------- 192 (393)
..++.+++|+++|++|+++ .++.|++||+.+++ .+..+....
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578899999999966665 57899999999998 665554321
Q ss_pred ---------------------ceEEE--EeCCCEE-EEE-cCCeEEEEECC--CCcee-eec--CCCCcEEEEEEeCC--
Q 016224 193 ---------------------EVGCM--ISEGPWI-FIG-VTNFVKAWNTQ--TNTDL-SLS--GPVGQVYAMAVGND-- 240 (393)
Q Consensus 193 ---------------------~~~~~--~~~~~~l-~~~-~~~~i~v~d~~--~~~~~-~~~--~~~~~v~~l~~~~~-- 240 (393)
.+.++ .+++++| +++ .|+.|++|++. +++.+ .+. .+...|.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 23333 3578885 666 78999999999 76665 333 67789999999998
Q ss_pred EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCC-----EEEEecCCCcEEEeeCCCcceeeE-eccCcc
Q 016224 241 LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGAN-----KLYSGSMDNSIRVWNLETLQCIQT-LTEHTS 314 (393)
Q Consensus 241 ~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~l~sg~~dg~i~iwd~~~~~~~~~-~~~~~~ 314 (393)
+|++++.+|.|++|++............+.+|...|.+++|+++ +|++++.|+.|++||+++++.+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998764321134466778899999988644 899999999999999999998887 568999
Q ss_pred ceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEee-----------------------cCCccEEEEEeeeCCCCC
Q 016224 315 VVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYTH-----------------------NEEHGVLALCGMPDSEGK 370 (393)
Q Consensus 315 ~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~~ 370 (393)
.|.+++|+ +++|++++.|+.|++||+.+++.+..+..+ .....+..+.|+|+..
T Consensus 243 ~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-- 320 (450)
T 2vdu_B 243 FVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP-- 320 (450)
T ss_dssp CEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS--
T ss_pred ceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC--
Confidence 99999996 889999999999999999988877666532 2234588899988655
Q ss_pred cEEEEEe-CCCeEEEEeC
Q 016224 371 PVLLCSC-NDNSVRFYDL 387 (393)
Q Consensus 371 ~~l~s~s-~dg~I~iwd~ 387 (393)
+|++++ .|+.|++|++
T Consensus 321 -~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 321 -FVAFFVEATKCIIILEM 337 (450)
T ss_dssp -EEEEEETTCSEEEEEEE
T ss_pred -EEEEEECCCCeEEEEEe
Confidence 888888 8999999999
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-26 Score=220.10 Aligned_cols=260 Identities=9% Similarity=-0.007 Sum_probs=193.2
Q ss_pred eecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEE
Q 016224 108 IKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCA 185 (393)
Q Consensus 108 ~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 185 (393)
...-|.+++|++|+ +++++.|++|+ |...+ ..+++|...|.+++|+|+| .++++.+|+.+..+ .
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~----~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~-~ 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA----KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG-L 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCC----SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC-S
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccc----ceecCCCccEEEEEECCCC-------CcceEEEEeCCCce-E
Confidence 34578999999985 45789999999 75554 3458999999999999998 56666666644322 2
Q ss_pred EEEecCCceEE--EEeCCCEEEEE-cCCeEEEEECCCCcee-eecCCCC-----cEEEEEEeCC--EEEEEeCCCcEEEE
Q 016224 186 GVINLGGEVGC--MISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSGPVG-----QVYAMAVGND--LLFAGTQDGAILAW 254 (393)
Q Consensus 186 ~~~~~~~~~~~--~~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~~~~-----~v~~l~~~~~--~l~~~~~dg~I~vw 254 (393)
..+.....+.+ +.++|..|+++ .++.|++|+.+. .+ .+. |.. .|.+++|+|+ +|++|+.||+|++|
T Consensus 80 ~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp STTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 22222333433 34688877765 889999999655 33 344 554 5999999999 99999999999999
Q ss_pred EeccCCcc---ccCceee----cCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcce---eeEe-ccCccceEEEEEcC
Q 016224 255 KFNVTTNC---FEPAASL----KGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQC---IQTL-TEHTSVVMSLLCWD 323 (393)
Q Consensus 255 d~~~~~~~---~~~~~~~----~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~---~~~~-~~~~~~v~~l~~~~ 323 (393)
|+..+... +-.+..+ .+|...|.+++|+++-+++++.|++|++||+.+++. .+++ .+|...|.+++|++
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg 236 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVD 236 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEET
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEEC
Confidence 99876320 0123444 678889999999866699999999999999988774 3567 47889999999998
Q ss_pred CEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 324 QFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 324 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+.|++++ +++|++||+.+........+|. ..+..+.+ |+++++..|+++++||+ ++|...+
T Consensus 237 ~~LASa~-~~tIkLWd~~~~~~~~~~~gh~--~~V~~va~-~~s~d~~~La~a~edG~-klw~~d~ 297 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDLKNYSISSLKTGSL--ENFHIIPL-NHEKESTILLMSNKTSY-KVLLEDE 297 (588)
T ss_dssp TEEEEEC-SSEEEEEETTTTEEEEEECSCC--SCCCEEEE-TTCSSCEEEEECSSCEE-EEEESSS
T ss_pred CEEEEEe-CCeEEEEECCCCeEEEEEcCCC--ceEEEEEe-eeCCCCCEEEEEcCCCC-EEEeecc
Confidence 8999987 6999999997655433333444 45777877 22334448999999999 9999753
No 117
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=1.2e-25 Score=211.17 Aligned_cols=239 Identities=16% Similarity=0.194 Sum_probs=185.8
Q ss_pred cceeecceEEeeEec-C--cEEEecCCCeEEEEECCCCc------EEEEEecCCcCCEEEEEecCCC-CEEEEEeCCCcE
Q 016224 105 RAVIKTDILCRNWVQ-G--NCMYGEKCKFLHSWTVGDGF------KLLTQLEGHQKVVSGITLPSGS-DKLYSGSKDETV 174 (393)
Q Consensus 105 ~~~~~~~i~c~~~~~-~--~~~~g~~dg~i~vwd~~~~~------~~~~~l~~h~~~I~~i~~s~~~-~~l~s~s~dg~v 174 (393)
...|...|++++|++ + .+++|+.||.|++||+.++. +.+..+.+|...|++++|+|++ ++|++++.|++|
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i 156 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVI 156 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCE
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEE
Confidence 345788999999987 4 46689999999999998762 4577889999999999999998 699999999999
Q ss_pred EEEECCCCeEEEEE--e-cCCceEEEE--eCCCEEEEE-cCCeEEEEECCCCcee-ee-cCCCCc-EEEEEEeCC--EEE
Q 016224 175 RVWDCASGQCAGVI--N-LGGEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTDL-SL-SGPVGQ-VYAMAVGND--LLF 243 (393)
Q Consensus 175 ~iwd~~~~~~~~~~--~-~~~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~~-~~-~~~~~~-v~~l~~~~~--~l~ 243 (393)
++||+.+++.+..+ . +...+.++. +++.+++++ .|+.|++||+++++.+ .+ ..|... +..+.|+++ +|+
T Consensus 157 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 236 (402)
T 2aq5_A 157 LVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILT 236 (402)
T ss_dssp EEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEE
T ss_pred EEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEE
Confidence 99999999999888 3 334454443 467766665 8899999999998877 44 577665 899999988 777
Q ss_pred EE---eCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEE-EecCCCcEEEeeCCCcce-eeEecc--Ccc
Q 016224 244 AG---TQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLY-SGSMDNSIRVWNLETLQC-IQTLTE--HTS 314 (393)
Q Consensus 244 ~~---~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~~~~-~~~~~~--~~~ 314 (393)
++ +.|+.|++||++..... .......|...+.+++++ +++|+ +++.|+.|++||+.+++. +..+.. |..
T Consensus 237 ~g~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~ 314 (402)
T 2aq5_A 237 TGFSRMSERQVALWDTKHLEEP--LSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKE 314 (402)
T ss_dssp EEECTTCCEEEEEEETTBCSSC--SEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSS
T ss_pred EeccCCCCceEEEEcCccccCC--ceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCC
Confidence 77 69999999999876421 112223466678888876 45665 666899999999998874 555544 458
Q ss_pred ceEEEEEcCCEEEEEeCCCcEEEEEcCCCcc
Q 016224 315 VVMSLLCWDQFLLSCSLDKTIKVWFATDSGN 345 (393)
Q Consensus 315 ~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~ 345 (393)
.+.+++|+++..+.++.++.+++|++.+...
T Consensus 315 ~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 315 SQRGMGYMPKRGLEVNKCEIARFYKLHERKC 345 (402)
T ss_dssp CCSEEEECCGGGSCGGGTEEEEEEEEETTEE
T ss_pred cccceEEecccccceecceeEEEEEcCCCcE
Confidence 9999999954323335677999999986543
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.9e-26 Score=210.89 Aligned_cols=223 Identities=13% Similarity=0.031 Sum_probs=166.3
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECC---------CCcee--eec
Q 016224 158 LPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQ---------TNTDL--SLS 226 (393)
Q Consensus 158 ~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~---------~~~~~--~~~ 226 (393)
+.+++.+|++|+.||+|++||+.+++.+..+... .+..+.....++.++.|+.|++|+.. +++.+ ...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~-~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTITTP-NPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEE-CCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEecC-CceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 4467889999999999999999999888777621 11111111224455578888888655 44433 233
Q ss_pred CCCCcEEEEEEeC--C--EEEEEeCCCcEEEEEeccCCccccCceee-cCceeeEEEEEEc--CCEEEEecCCCcEEEee
Q 016224 227 GPVGQVYAMAVGN--D--LLFAGTQDGAILAWKFNVTTNCFEPAASL-KGHSLAVVSLVVG--ANKLYSGSMDNSIRVWN 299 (393)
Q Consensus 227 ~~~~~v~~l~~~~--~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd 299 (393)
.|...|.+++++| + +|++++.||.|++||++++. ..... ..|...+.+++++ +.+|++|+.|+.|++||
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~----~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS----QYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC----EEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc----EEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 6678899999998 5 89999999999999998763 23333 3345568888886 56999999999999999
Q ss_pred CCCccee-eEecc-CccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEe---ecCCccEEEEEeeeCCCCCcE
Q 016224 300 LETLQCI-QTLTE-HTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYT---HNEEHGVLALCGMPDSEGKPV 372 (393)
Q Consensus 300 ~~~~~~~-~~~~~-~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~ 372 (393)
+++++.+ ..+.. |...|.+++|+ +.+|++++ |+.|++||+++.+.+..+.. +.......+++|+|++. +
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~ 274 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK---N 274 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS---E
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC---E
Confidence 9999988 88888 99999999998 66999999 55999999998766543332 11111114588887665 9
Q ss_pred EEEEeC-CCeEEEEeCCc
Q 016224 373 LLCSCN-DNSVRFYDLPS 389 (393)
Q Consensus 373 l~s~s~-dg~I~iwd~~s 389 (393)
|++++. |+.|++|++..
T Consensus 275 l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEEEETTTTEEEEEEECT
T ss_pred EEEecCCCCcEEEEEEcc
Confidence 999888 99999998854
No 119
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=3.9e-25 Score=202.04 Aligned_cols=214 Identities=13% Similarity=0.159 Sum_probs=170.0
Q ss_pred EEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCcee
Q 016224 144 TQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDL 223 (393)
Q Consensus 144 ~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~ 223 (393)
..+.+|.+.|++++|+|++++|++++.||.|++||+.++...... ..
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---------------------------------~~ 51 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWEL---------------------------------SD 51 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEE---------------------------------EE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCccee---------------------------------cc
Confidence 356899999999999999999999999999999999875322111 11
Q ss_pred eecCCCCcEEEEEEeC---C-EEEEEeCCCcEEEEEeccCCccc-----cCceeecCceeeEEEEEEc----CCEEEEec
Q 016224 224 SLSGPVGQVYAMAVGN---D-LLFAGTQDGAILAWKFNVTTNCF-----EPAASLKGHSLAVVSLVVG----ANKLYSGS 290 (393)
Q Consensus 224 ~~~~~~~~v~~l~~~~---~-~l~~~~~dg~I~vwd~~~~~~~~-----~~~~~~~~~~~~v~~l~~~----~~~l~sg~ 290 (393)
.+..|...|.+++|++ . +|++++.||.|++||++...... +....+..|...|.+++|+ +++|++++
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 131 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG 131 (351)
T ss_dssp EEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec
Confidence 4467899999999987 2 99999999999999998764321 3456677899999999996 55899999
Q ss_pred CCCcEEEeeCCCcceeeEec-------------cCccceEEEEEc-----CCEEEEEeCCCcEEEEEcCCCcceEEEEee
Q 016224 291 MDNSIRVWNLETLQCIQTLT-------------EHTSVVMSLLCW-----DQFLLSCSLDKTIKVWFATDSGNLEVTYTH 352 (393)
Q Consensus 291 ~dg~i~iwd~~~~~~~~~~~-------------~~~~~v~~l~~~-----~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 352 (393)
.|+.|++||+++++.+..+. .|...+.++.|+ +.+|++++.|+.+.+|+.............
T Consensus 132 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (351)
T 3f3f_A 132 NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP 211 (351)
T ss_dssp TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC
T ss_pred CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC
Confidence 99999999999887665543 577889999996 569999999999988877655442233333
Q ss_pred cCCccEEEEEeeeCCCC-CcEEEEEeCCCeEEEEeCCce
Q 016224 353 NEEHGVLALCGMPDSEG-KPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 353 ~~~~~v~~~~~~~~~~~-~~~l~s~s~dg~I~iwd~~s~ 390 (393)
.+...+.+++|+|+... ..+|++++.||.|++||+.++
T Consensus 212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 34456999999987521 148999999999999999764
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=2.2e-23 Score=194.78 Aligned_cols=274 Identities=11% Similarity=0.069 Sum_probs=204.7
Q ss_pred cceEEeeEecCc--E-EEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE-eCCCcEEEEECCCCeEE
Q 016224 110 TDILCRNWVQGN--C-MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG-SKDETVRVWDCASGQCA 185 (393)
Q Consensus 110 ~~i~c~~~~~~~--~-~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd~~~~~~~ 185 (393)
..+.+++|++++ + ++++.|+.|++||+.++ +.+..+..|. .|.+++|+|++++|+.+ +.|+.|++||+.+++.+
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN-NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCC-eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEE
Confidence 357999999875 3 45778999999999998 8888887665 99999999999988655 46799999999999999
Q ss_pred EEEecCCceEEEE--eCCCEE-EEE-cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EE-EEEeCCCcEEEEEecc
Q 016224 186 GVINLGGEVGCMI--SEGPWI-FIG-VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LL-FAGTQDGAILAWKFNV 258 (393)
Q Consensus 186 ~~~~~~~~~~~~~--~~~~~l-~~~-~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l-~~~~~dg~I~vwd~~~ 258 (393)
..+..+..+..+. ++++.+ +++ .++.|++||+.+++..........+..++|+++ .| ++++.++.|++||+++
T Consensus 110 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 110 GTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp EEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 8888776665443 577766 455 578999999999888754444567799999988 44 6778899999999987
Q ss_pred CCccccCceeecCceeeEEEEEEc--CCEEEEec---CCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEE-EEEe
Q 016224 259 TTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGS---MDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFL-LSCS 330 (393)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~s 330 (393)
.. ....+. +...+.+++++ +++|++++ .++.|++||+++++.+..+..|. .+.++.++ +++| ++++
T Consensus 190 ~~----~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 190 NS----VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALS 263 (391)
T ss_dssp TE----EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEET
T ss_pred Ce----EEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcC
Confidence 63 333333 44567777776 56787777 68999999999999998888765 46788888 5566 6778
Q ss_pred CCCcEEEEEcCCCcceEEEEeecCCcc----EE---------EEEeeeCCCC-------CcEEEEEeCCCeEEEEeCCce
Q 016224 331 LDKTIKVWFATDSGNLEVTYTHNEEHG----VL---------ALCGMPDSEG-------KPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 331 ~dg~i~iwd~~~~~~~~~~~~~~~~~~----v~---------~~~~~~~~~~-------~~~l~s~s~dg~I~iwd~~s~ 390 (393)
.|+.|++||+.+++.+..+..+..... +. ...|..+... ...|...+.|..+++|++.++
T Consensus 264 ~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g 343 (391)
T 1l0q_A 264 FXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDG 343 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSS
T ss_pred CCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCC
Confidence 899999999998877666654332210 00 0112222111 124666677899999999776
Q ss_pred e
Q 016224 391 I 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 344 ~ 344 (391)
T 1l0q_A 344 S 344 (391)
T ss_dssp C
T ss_pred c
Confidence 4
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=5e-25 Score=209.04 Aligned_cols=215 Identities=20% Similarity=0.276 Sum_probs=170.8
Q ss_pred EEecCCcCCEEEEEecCC-CCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCce
Q 016224 144 TQLEGHQKVVSGITLPSG-SDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTD 222 (393)
Q Consensus 144 ~~l~~h~~~I~~i~~s~~-~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~ 222 (393)
.....|.+.|++++|+|+ +.+|++++.||.|++||+.+...... . +......
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~--------------------~-------~~~~~~~ 174 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE--------------------P-------SGECQPD 174 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC--------------------T-------TCCCCCS
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC--------------------c-------cccCCCc
Confidence 455679999999999997 78999999999999999976311000 0 0001112
Q ss_pred eeecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEeccCCcc---ccCceeecCceeeEEEEEEc---CCEEEEecCCC
Q 016224 223 LSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNC---FEPAASLKGHSLAVVSLVVG---ANKLYSGSMDN 293 (393)
Q Consensus 223 ~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~---~~~~~~~~~~~~~v~~l~~~---~~~l~sg~~dg 293 (393)
..+..|...|.+++|+++ +|++++.||.|++||+...... ......+..|...|.+++|+ +.+|++++.|+
T Consensus 175 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 254 (430)
T 2xyi_A 175 LRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ 254 (430)
T ss_dssp EEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC
Confidence 255688899999999986 8999999999999999874321 22345677899999999996 45899999999
Q ss_pred cEEEeeCCCc---ceeeEeccCccceEEEEEc--CC-EEEEEeCCCcEEEEEcCCC-cceEEEEeecCCccEEEEEeeeC
Q 016224 294 SIRVWNLETL---QCIQTLTEHTSVVMSLLCW--DQ-FLLSCSLDKTIKVWFATDS-GNLEVTYTHNEEHGVLALCGMPD 366 (393)
Q Consensus 294 ~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~--~~-~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~ 366 (393)
.|++||++++ +.+..+..|...|.+++|+ +. +|++++.||.|++||+++. ..+..+..|. ..+.++.|+|+
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~--~~v~~i~~sp~ 332 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK--DEIFQVQWSPH 332 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS--SCEEEEEECSS
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC--CCEEEEEECCC
Confidence 9999999987 6788888999999999998 33 7999999999999999874 4455555554 45999999987
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCc
Q 016224 367 SEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 367 ~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+. .+|++++.|+.|+|||+..
T Consensus 333 ~~--~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 333 NE--TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CT--TEEEEEETTSCCEEEEGGG
T ss_pred CC--CEEEEEeCCCcEEEEeCCC
Confidence 53 3899999999999999976
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.7e-27 Score=221.56 Aligned_cols=222 Identities=11% Similarity=0.037 Sum_probs=174.2
Q ss_pred ceeecceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEE
Q 016224 106 AVIKTDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCA 185 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 185 (393)
..|...|.+++|+|++ .++.+.+|+.+.. .+..+ .|...|.+++|+|+|++||+++.||+|+|||.+. ++
T Consensus 49 ~gh~~~v~~V~FsPdg-----~~~~~~~~~~~~~--~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l 118 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLE-----FENKLDFELAQQN--GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--ML 118 (588)
T ss_dssp SSBGGGTEEEEEECCC-----CCCTTTTSCCCSS--CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EE
T ss_pred cCCCccEEEEEECCCC-----CcceEEEEeCCCc--eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--ee
Confidence 3588899999999987 4556555554322 12222 5689999999999999999999999999999644 55
Q ss_pred EEEecCC------ceEE--EEeCCCEEEEE-cCCeEEEEECCCCce--------eee----cCCCCcEEEEEEeCCEEEE
Q 016224 186 GVINLGG------EVGC--MISEGPWIFIG-VTNFVKAWNTQTNTD--------LSL----SGPVGQVYAMAVGNDLLFA 244 (393)
Q Consensus 186 ~~~~~~~------~~~~--~~~~~~~l~~~-~~~~i~v~d~~~~~~--------~~~----~~~~~~v~~l~~~~~~l~~ 244 (393)
..+. +. .+.+ +.+++++|+++ .|++|++||+.++.. ..+ .+|...|.+++|+|+-+++
T Consensus 119 ~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaa 197 (588)
T 2j04_A 119 TNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVA 197 (588)
T ss_dssp EECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEE
T ss_pred eecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEE
Confidence 5555 33 2444 44799999886 789999999999853 243 6788899999999998889
Q ss_pred EeCCCcEEEEEeccCCccccCceee-cCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEE--
Q 016224 245 GTQDGAILAWKFNVTTNCFEPAASL-KGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLC-- 321 (393)
Q Consensus 245 ~~~dg~I~vwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~-- 321 (393)
++.|++|++||+...... +....+ .+|...|.+++|.++.|++++ +++|++||+.+++......+|...+..+.+
T Consensus 198 ss~D~tVrlWd~~~~~~~-~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~ 275 (588)
T 2j04_A 198 ALSNNSVFSMTVSASSHQ-PVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNH 275 (588)
T ss_dssp EETTCCEEEECCCSSSSC-CCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETT
T ss_pred EeCCCeEEEEECCCCccc-cceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeee
Confidence 999999999999876421 122345 478889999999878899887 699999999988774444489999999999
Q ss_pred c--CCEEEEEeCCCcEEEEEcC
Q 016224 322 W--DQFLLSCSLDKTIKVWFAT 341 (393)
Q Consensus 322 ~--~~~l~s~s~dg~i~iwd~~ 341 (393)
+ +..|++++.||+ ++|...
T Consensus 276 s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 276 EKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSSCEEEEECSSCEE-EEEESS
T ss_pred CCCCCEEEEEcCCCC-EEEeec
Confidence 6 457999999999 999874
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=1.2e-24 Score=194.91 Aligned_cols=192 Identities=13% Similarity=0.074 Sum_probs=137.6
Q ss_pred ecCcEEEec---CCCeEEEEECC-CCcEEEEEecCCcCCEEEEEecC---CCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 016224 118 VQGNCMYGE---KCKFLHSWTVG-DGFKLLTQLEGHQKVVSGITLPS---GSDKLYSGSKDETVRVWDCASGQCAGVINL 190 (393)
Q Consensus 118 ~~~~~~~g~---~dg~i~vwd~~-~~~~~~~~l~~h~~~I~~i~~s~---~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~ 190 (393)
..+.++..+ .|+.|++|++. ++ +.+..+.+|...++.++|++ ++++|++++.|++|+|||+.++++++++..
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG-~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDG-GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTS-CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCcEEEecccCCCCcEEEEEECCCC-ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 344455443 49999999994 46 78888888999999999988 779999999999999999999999988863
Q ss_pred CCc----e--EEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCcccc
Q 016224 191 GGE----V--GCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFE 264 (393)
Q Consensus 191 ~~~----~--~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~ 264 (393)
+.. + ..+.+++.+++++.... .+| .+++|+.|++|++||..++..
T Consensus 222 ~~~~v~~v~~vafSpdG~~lvs~s~~~-~~w-------------------------~laSGs~D~tIklWd~~tgk~--- 272 (356)
T 2w18_A 222 DDSYQASVCHKAYSEMGLLFIVLSHPC-AKE-------------------------SESLRSPVFQLIVINPKTTLS--- 272 (356)
T ss_dssp CC---CCCEEEEEEETTEEEEEEC--------------------------------------CCEEEEEEETTTTEE---
T ss_pred CCcceeeeEEEEECCCCCEEEEeccCC-Ccc-------------------------eeeccCCCcEEEEEECCCCEE---
Confidence 321 1 11223333332221100 000 357889999999999987632
Q ss_pred Cceee-----cCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccceE-EEEEc--CCEEEEEeCCCcEE
Q 016224 265 PAASL-----KGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVM-SLLCW--DQFLLSCSLDKTIK 336 (393)
Q Consensus 265 ~~~~~-----~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~l~~~--~~~l~s~s~dg~i~ 336 (393)
+..+ .+|...+.+..+++.++++++.|++|+|||+.+++++.++.+|...+. +++|+ +++|++|+.|++|+
T Consensus 273 -l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIk 351 (356)
T 2w18_A 273 -VGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIF 351 (356)
T ss_dssp -EEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEE
T ss_pred -EEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEE
Confidence 2222 466666666777788999999999999999999999999999987655 58888 67999999999999
Q ss_pred EEEc
Q 016224 337 VWFA 340 (393)
Q Consensus 337 iwd~ 340 (393)
|||+
T Consensus 352 lWd~ 355 (356)
T 2w18_A 352 VYHY 355 (356)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9986
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.6e-24 Score=218.18 Aligned_cols=211 Identities=17% Similarity=0.193 Sum_probs=167.0
Q ss_pred EEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCce
Q 016224 143 LTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTD 222 (393)
Q Consensus 143 ~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~ 222 (393)
+..+.+|.+.|++++|+|++++|++|+.||+|+|||+.++.....
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~----------------------------------- 46 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI----------------------------------- 46 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEE-----------------------------------
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccc-----------------------------------
Confidence 356789999999999999999999999999999999874432111
Q ss_pred eeecCCCCcEEEEEEeC----CEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc----CCEEEEecCCCc
Q 016224 223 LSLSGPVGQVYAMAVGN----DLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG----ANKLYSGSMDNS 294 (393)
Q Consensus 223 ~~~~~~~~~v~~l~~~~----~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~sg~~dg~ 294 (393)
..+.+|...|.+++|++ ++|++++.||.|++||+..+.. .....+..|...|.+++++ ++++++++.||.
T Consensus 47 ~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~ 124 (753)
T 3jro_A 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 124 (753)
T ss_dssp EEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred eeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc--cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc
Confidence 13467899999999974 3999999999999999988631 3566778899999999996 568999999999
Q ss_pred EEEeeCCCc--ceeeEeccCccceEEEEEcC---------------CEEEEEeCCCcEEEEEcCCCcceEEEE--eecCC
Q 016224 295 IRVWNLETL--QCIQTLTEHTSVVMSLLCWD---------------QFLLSCSLDKTIKVWFATDSGNLEVTY--THNEE 355 (393)
Q Consensus 295 i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~---------------~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~~ 355 (393)
|++||++++ .....+..|...|.++.|++ .+|++++.||.|++||+++........ ...+.
T Consensus 125 I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~ 204 (753)
T 3jro_A 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (753)
T ss_dssp EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC
Confidence 999999887 34556778999999999974 589999999999999998765432211 12234
Q ss_pred ccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 356 HGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 356 ~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
..+.+++|+|+...+.+|++++.||.|++||+.++
T Consensus 205 ~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 205 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 56999999988322449999999999999999875
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=5e-24 Score=199.78 Aligned_cols=196 Identities=14% Similarity=0.115 Sum_probs=134.5
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEe
Q 016224 159 PSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVG 238 (393)
Q Consensus 159 s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~ 238 (393)
++++.+|++++.|++|+|||+++++....... ..+.+|...|.+++|+
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~--------------------------------~~~~gH~~~v~~v~~~ 145 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVL--------------------------------GGKSGHHNFVNDIDIA 145 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEE--------------------------------CTTTSCSSCEEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeee--------------------------------cccCCCCCceEEEEEc
Confidence 34455777888888888888777655432210 1357899999999998
Q ss_pred C--------C--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcC---CEEEEecCCCcEEEeeCCCcce
Q 016224 239 N--------D--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGSMDNSIRVWNLETLQC 305 (393)
Q Consensus 239 ~--------~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~~dg~i~iwd~~~~~~ 305 (393)
| + +|++++.|++|++||++.. .....+..|...+.+++|++ ++|++++.|++|++||+++++.
T Consensus 146 p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~----~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 146 DVYSADNRLAEQVIASVGDDCTLIIWRLTDE----GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp EEECTTCSEEEEEEEEEETTSEEEEEEEETT----EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred cccccccCCCCCEEEEEECCCeEEEEECCCC----ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 6 3 8999999999999999876 44556667888999999975 3799999999999999988765
Q ss_pred eeEe-------------------------ccCccceEEEEEc---CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCC--
Q 016224 306 IQTL-------------------------TEHTSVVMSLLCW---DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE-- 355 (393)
Q Consensus 306 ~~~~-------------------------~~~~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-- 355 (393)
.... .+|...+.++.|+ ++.|++++.|+++++||+........+..+...
T Consensus 222 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~ 301 (393)
T 4gq1_A 222 AEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLG 301 (393)
T ss_dssp ---------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------
T ss_pred cccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccc
Confidence 4322 3566778888886 679999999999999999876554444332221
Q ss_pred --------------ccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 356 --------------HGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 356 --------------~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
.......+.+. .++.++++|+.||.|++||+.+++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sgs~Dg~V~lwd~~~~~ 350 (393)
T 4gq1_A 302 PKNLLPNVQGISLFPSLLGACPHPR-YMDYFATAHSQHGLIQLINTYEKD 350 (393)
T ss_dssp --CCSCSEEEECSSCCSSCCEECSS-CTTEEEEEETTTTEEEEEETTCTT
T ss_pred cEEEccccccccccCcceeEEEccC-CCCEEEEEECCCCEEEEEECCCCc
Confidence 11112233332 244577888999999999998764
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=6.3e-22 Score=187.37 Aligned_cols=229 Identities=12% Similarity=0.089 Sum_probs=185.2
Q ss_pred eeecceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE-eCCCcEEEEECCCCe
Q 016224 107 VIKTDILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG-SKDETVRVWDCASGQ 183 (393)
Q Consensus 107 ~~~~~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd~~~~~ 183 (393)
.|...+.+++|++++ +++++.|+.|++||+.++ +.+..+..|...+.+++|+|++++|+++ +.|+.|++||+.+++
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL-AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC-CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc-eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc
Confidence 456689999998764 446888999999999988 7888888999999999999999988655 479999999999999
Q ss_pred EEEEEecCCceEEEE--eCCCEEEEEc---------CCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeCCC
Q 016224 184 CAGVINLGGEVGCMI--SEGPWIFIGV---------TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDG 249 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~--~~~~~l~~~~---------~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~dg 249 (393)
.+..+.....+..+. ++++.++++. ++.|++||+.+++......+...+..++|+++ ++++++.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 246 EIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp EEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTT
T ss_pred EEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCC
Confidence 988887766655443 5777777653 67999999999988866677778999999987 567778999
Q ss_pred cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecC---------------CCcEEEeeCCCcceeeEeccC
Q 016224 250 AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSM---------------DNSIRVWNLETLQCIQTLTEH 312 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~---------------dg~i~iwd~~~~~~~~~~~~~ 312 (393)
.|++||+.+. +....+. +...+.+++++ ++++++++. ||.|++||+.+++.+..+..
T Consensus 326 ~v~v~d~~~~----~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~- 399 (433)
T 3bws_A 326 KIEVYDLKEK----KVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA- 399 (433)
T ss_dssp EEEEEETTTT----EEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-
T ss_pred EEEEEECCCC----cEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-
Confidence 9999999865 3333333 55667788886 557777765 57999999999999988876
Q ss_pred ccceEEEEEc--CCEEEEEeC-CCcEEEEEcCC
Q 016224 313 TSVVMSLLCW--DQFLLSCSL-DKTIKVWFATD 342 (393)
Q Consensus 313 ~~~v~~l~~~--~~~l~s~s~-dg~i~iwd~~~ 342 (393)
...+.+++|+ +++|++++. |+.|++|++..
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 4578899997 668887765 99999999853
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=7.7e-22 Score=192.12 Aligned_cols=266 Identities=13% Similarity=0.084 Sum_probs=198.0
Q ss_pred eEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEEC--CCCeEEEEEecC
Q 016224 116 NWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDC--ASGQCAGVINLG 191 (393)
Q Consensus 116 ~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~--~~~~~~~~~~~~ 191 (393)
.+++++ +++++.|++|.+||..++ +++.++..+.. +..++|+|++++|++++.|++|.+||+ .+++++.++...
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~-~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSK-KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTC-CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCc-eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC
Confidence 355554 346888999999999998 88888884433 899999999999999999999999999 899999988876
Q ss_pred CceEE--EEe----CCCEEEEE--cCCeEEEEECCCCceee-ecC----------C-CCcEEEEEEeCC---EEEEEeCC
Q 016224 192 GEVGC--MIS----EGPWIFIG--VTNFVKAWNTQTNTDLS-LSG----------P-VGQVYAMAVGND---LLFAGTQD 248 (393)
Q Consensus 192 ~~~~~--~~~----~~~~l~~~--~~~~i~v~d~~~~~~~~-~~~----------~-~~~v~~l~~~~~---~l~~~~~d 248 (393)
..... +.+ ++++++++ .+++|.+||..+.+.+. +.. | ...+..+.++++ ++++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 55544 335 78988876 47899999999988762 222 1 237899999986 77888899
Q ss_pred CcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEE-EecCCCcEEEeeCCCcceeeEecc----CccceEEEEE
Q 016224 249 GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLY-SGSMDNSIRVWNLETLQCIQTLTE----HTSVVMSLLC 321 (393)
Q Consensus 249 g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~l~~ 321 (393)
+.|.+||+...... . ...+ .+...+..+.|+ +++|+ ++..+++|.+||+.+++++.++.. |......+..
T Consensus 302 g~i~vvd~~~~~~l-~-~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~ 378 (543)
T 1nir_A 302 GKVLLVNYKDIDNL-T-VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH 378 (543)
T ss_dssp TEEEEEECTTSSSC-E-EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEE
T ss_pred CeEEEEEecCCCcc-e-eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCC
Confidence 99999999875321 1 1122 233344555665 66655 555689999999999999988874 5544444432
Q ss_pred c--CCEEEEEe-CCCcEEEEEcCC-------CcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe-------CCCeEEE
Q 016224 322 W--DQFLLSCS-LDKTIKVWFATD-------SGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC-------NDNSVRF 384 (393)
Q Consensus 322 ~--~~~l~s~s-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s-------~dg~I~i 384 (393)
. +..++++. .|++|.+||+.+ .+.+..+..+.. .+..+.++|+++ +|++++ .+++|.+
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~--~~~~v~~~pdg~---~l~v~~~~~~~~~~~~~v~v 453 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG--GSLFIKTHPKSS---HLYVDTTFNPDARISQSVAV 453 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS--CCCCEECCTTCC---EEEECCTTCSSHHHHTCEEE
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC--CceEEEcCCCCC---cEEEecCCCCCcccCceEEE
Confidence 2 34566665 589999999987 566666665543 367788888766 888887 2789999
Q ss_pred EeCCcee
Q 016224 385 YDLPSVI 391 (393)
Q Consensus 385 wd~~s~~ 391 (393)
||+.+++
T Consensus 454 ~d~~~~~ 460 (543)
T 1nir_A 454 FDLKNLD 460 (543)
T ss_dssp EETTCTT
T ss_pred EECCCCC
Confidence 9999875
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.8e-21 Score=189.48 Aligned_cols=273 Identities=9% Similarity=0.049 Sum_probs=203.3
Q ss_pred ceEEeeEecCc--EEEecCCCeEEEEEC--CCCcEEEEEecCCcCCEEEEEecC----CCCEEEEEeC-CCcEEEEECCC
Q 016224 111 DILCRNWVQGN--CMYGEKCKFLHSWTV--GDGFKLLTQLEGHQKVVSGITLPS----GSDKLYSGSK-DETVRVWDCAS 181 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~dg~i~vwd~--~~~~~~~~~l~~h~~~I~~i~~s~----~~~~l~s~s~-dg~v~iwd~~~ 181 (393)
.+.++.|++++ +++++.|+.|++||+ .++ +.+.++. +...+..++|+| ++++|++++. +++|.|||..+
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~-~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEP-TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCC-cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 36788899874 557888999999999 777 7888888 456789999999 9999999884 89999999999
Q ss_pred CeEEEEEecCC------------ceEEE--EeCCCEEEEE--cCCeEEEEECCCCceee--ecCCCCcEEEEEEeCC--E
Q 016224 182 GQCAGVINLGG------------EVGCM--ISEGPWIFIG--VTNFVKAWNTQTNTDLS--LSGPVGQVYAMAVGND--L 241 (393)
Q Consensus 182 ~~~~~~~~~~~------------~~~~~--~~~~~~l~~~--~~~~i~v~d~~~~~~~~--~~~~~~~v~~l~~~~~--~ 241 (393)
++++..+.... .+..+ .+++..++++ .++.|.+||..+.+.+. ...+...+..+.|+|+ +
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCE
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCE
Confidence 99998887521 23333 2445555544 67899999998865432 3345667888999998 4
Q ss_pred EE-EEeCCCcEEEEEeccCCccccCceeecC----ceeeEEEEE-Ec-CCEEEEec-CCCcEEEeeCCC-------ccee
Q 016224 242 LF-AGTQDGAILAWKFNVTTNCFEPAASLKG----HSLAVVSLV-VG-ANKLYSGS-MDNSIRVWNLET-------LQCI 306 (393)
Q Consensus 242 l~-~~~~dg~I~vwd~~~~~~~~~~~~~~~~----~~~~v~~l~-~~-~~~l~sg~-~dg~i~iwd~~~-------~~~~ 306 (393)
|+ ++..+++|.+||+.++. +...+.. |......+. .+ +..++++. .|++|.+||+.+ ++++
T Consensus 338 l~va~~~~~~v~v~D~~tg~----l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v 413 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDRR----LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKV 413 (543)
T ss_dssp EEEEEGGGTEEEEEETTTTE----EEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred EEEEecCCCeEEEEECCCCe----EEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEE
Confidence 54 45568999999998873 3333332 543333332 23 33566665 689999999998 8999
Q ss_pred eEeccCccceEEEEEc--CCEEEEEe-------CCCcEEEEEcCCCcce-EEEEe------ecCCccEEEEEeeeCCCCC
Q 016224 307 QTLTEHTSVVMSLLCW--DQFLLSCS-------LDKTIKVWFATDSGNL-EVTYT------HNEEHGVLALCGMPDSEGK 370 (393)
Q Consensus 307 ~~~~~~~~~v~~l~~~--~~~l~s~s-------~dg~i~iwd~~~~~~~-~~~~~------~~~~~~v~~~~~~~~~~~~ 370 (393)
+++..|...+..+.++ +++|++++ .+++|.+||+.+.+.. ..+.. ......+..+.|+|++.
T Consensus 414 ~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~-- 491 (543)
T 1nir_A 414 AELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD-- 491 (543)
T ss_dssp EEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS--
T ss_pred EEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC--
Confidence 9999998888888887 67899887 2779999999988876 33311 12245688999988866
Q ss_pred cEEEEEe-----CCCeEEEEeCCceee
Q 016224 371 PVLLCSC-----NDNSVRFYDLPSVII 392 (393)
Q Consensus 371 ~~l~s~s-----~dg~I~iwd~~s~~l 392 (393)
.|+.+. .|+.|.|||..++++
T Consensus 492 -~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 492 -EVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp -EEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred -EEEEEeecCCCCCCeEEEEECCCceE
Confidence 666552 479999999999876
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=3.1e-20 Score=169.23 Aligned_cols=264 Identities=8% Similarity=0.061 Sum_probs=183.9
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeC-CCcEEEEECCCCeE-EEEEecCCce---EE
Q 016224 122 CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSK-DETVRVWDCASGQC-AGVINLGGEV---GC 196 (393)
Q Consensus 122 ~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~-dg~v~iwd~~~~~~-~~~~~~~~~~---~~ 196 (393)
+++...++.|.+||..++ +.+..+..+...+ .++|+|++++|++++. ++.|.+||+.+++. ...+...... ..
T Consensus 13 ~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTL-EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVD 90 (331)
T ss_dssp EEEEGGGTEEEEEETTTC-CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEE
T ss_pred EEEecCCCeEEEEeCccc-ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceE
Confidence 446788999999999988 7777777777777 9999999997777666 89999999999887 6666554332 34
Q ss_pred EEeCCCEEEEEcCC----eEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeCCCc-EEEEEeccCCccccCcee
Q 016224 197 MISEGPWIFIGVTN----FVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDGA-ILAWKFNVTTNCFEPAAS 268 (393)
Q Consensus 197 ~~~~~~~l~~~~~~----~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~dg~-I~vwd~~~~~~~~~~~~~ 268 (393)
+.+++++++++.++ .|.+||+.+++.+...........++|+|+ ++++...++. |.+|++............
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 55788888876444 899999999988755555667799999998 4555566688 999998754321111011
Q ss_pred ecCceeeEEEEEEc--CCEE-EEecCCCcEEEeeCCCcce---eeEeccCccceEEEEEc--CCEEEEE-eCCCcEEEEE
Q 016224 269 LKGHSLAVVSLVVG--ANKL-YSGSMDNSIRVWNLETLQC---IQTLTEHTSVVMSLLCW--DQFLLSC-SLDKTIKVWF 339 (393)
Q Consensus 269 ~~~~~~~v~~l~~~--~~~l-~sg~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~l~~~--~~~l~s~-s~dg~i~iwd 339 (393)
..........++++ ++++ +++..++.|++||+.+++. +..+..+ ..+..++++ +++|+++ ..++.|.+||
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFN 249 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEE
Confidence 11223345666665 5554 5555789999999999888 7777644 456678887 6666555 4578899999
Q ss_pred cCCCcc--eEEEEee----cC-CccEEEEEeeeCCCCCcEEE-EEeCCCeEEEEeCCcee
Q 016224 340 ATDSGN--LEVTYTH----NE-EHGVLALCGMPDSEGKPVLL-CSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 340 ~~~~~~--~~~~~~~----~~-~~~v~~~~~~~~~~~~~~l~-s~s~dg~I~iwd~~s~~ 391 (393)
+.+++. +..+... .. ......++|+|++. +|+ ++..++.|.+||+.+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~---~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 250 QLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTET---KLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSS---EEEEEETTTTEEEEEETTSCE
T ss_pred CCCCceeeecccccccccCCCCcccccceEECCCCC---EEEEecCCCCcEEEEEecCCc
Confidence 987654 2222221 11 11123467877654 565 45557799999998754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=3.1e-20 Score=175.18 Aligned_cols=267 Identities=10% Similarity=-0.007 Sum_probs=193.0
Q ss_pred ceEEeeEecCc---EEEec----CCC----eEEEEEC--CCCcEEE--EEecCCcCCEEEEEecC--------------C
Q 016224 111 DILCRNWVQGN---CMYGE----KCK----FLHSWTV--GDGFKLL--TQLEGHQKVVSGITLPS--------------G 161 (393)
Q Consensus 111 ~i~c~~~~~~~---~~~g~----~dg----~i~vwd~--~~~~~~~--~~l~~h~~~I~~i~~s~--------------~ 161 (393)
.+....|...+ +++|+ .+| .|++||+ .++ +.+ ..+.+|...+..+++++ .
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG-TVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTT-CEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCC-CEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 45556665432 33443 567 8999999 888 555 56889998888887764 1
Q ss_pred CCEEEEEeCC------CcEEEEECCCCeEEEEEecCCceEE--EEeCCCEEEEE-cCC---eEEEEECCCCceeeecCCC
Q 016224 162 SDKLYSGSKD------ETVRVWDCASGQCAGVINLGGEVGC--MISEGPWIFIG-VTN---FVKAWNTQTNTDLSLSGPV 229 (393)
Q Consensus 162 ~~~l~s~s~d------g~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~-~~~---~i~v~d~~~~~~~~~~~~~ 229 (393)
+..|+.++.+ +.|++||+..+.......+...+.. +.++++.|+.+ .++ .|++||+.+++...+..+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCS
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCC
Confidence 5667666654 7999999986544333344444443 44688877765 443 9999999999988888888
Q ss_pred CcEEEEEEeCC--EEE-EEeCCCc--EEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecC-CC--cEEEee
Q 016224 230 GQVYAMAVGND--LLF-AGTQDGA--ILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSM-DN--SIRVWN 299 (393)
Q Consensus 230 ~~v~~l~~~~~--~l~-~~~~dg~--I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~-dg--~i~iwd 299 (393)
..+.+++|+|+ .|+ +++.++. |++||+.++. ...+..|...+.+++|+ +++|++++. ++ .|.+||
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-----IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-----EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 99999999998 555 6666665 9999988753 24556677788888886 567777775 44 688889
Q ss_pred CCCcceeeEeccCccceEEEEEc--CCEEEEEeCC---CcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEE
Q 016224 300 LETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLD---KTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLL 374 (393)
Q Consensus 300 ~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 374 (393)
+.+++. ..+..+...+.++.|+ +++|++++.+ ..|++||+.+++. ..+..+ ..+..++|+|++. +|+
T Consensus 298 ~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~---~~~~~~~~spdg~---~l~ 369 (415)
T 2hqs_A 298 INGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSST---FLDETPSLAPNGT---MVI 369 (415)
T ss_dssp TTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCS---SSCEEEEECTTSS---EEE
T ss_pred CCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCC---CCcCCeEEcCCCC---EEE
Confidence 988764 4556677788889998 6788887764 5899999987654 333332 2588899988765 888
Q ss_pred EEeCCC---eEEEEeCCcee
Q 016224 375 CSCNDN---SVRFYDLPSVI 391 (393)
Q Consensus 375 s~s~dg---~I~iwd~~s~~ 391 (393)
+++.++ .|++||+....
T Consensus 370 ~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEEETTEEEEEEEETTSCC
T ss_pred EEEcCCCccEEEEEECCCCc
Confidence 888776 89999987653
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=3e-20 Score=169.27 Aligned_cols=256 Identities=11% Similarity=0.034 Sum_probs=182.1
Q ss_pred cEEEecCCCeEEEEECCCCcEEEEEecCCc-C-CEEEEEecCCCCEEE-EEeCCCcEEEEECCCCeEEEEEecCC-----
Q 016224 121 NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQ-K-VVSGITLPSGSDKLY-SGSKDETVRVWDCASGQCAGVINLGG----- 192 (393)
Q Consensus 121 ~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~-~-~I~~i~~s~~~~~l~-s~s~dg~v~iwd~~~~~~~~~~~~~~----- 192 (393)
.+++++.++.|++||+.++ +.+..+.... . .+..++|+|++++|+ ++..++.|.+||+.+++.+..+....
T Consensus 3 ~~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKM-AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEETTTEEEEEETTTT-EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred EEEEcCCCCeEEEEECCCC-cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 3567889999999999998 7777776332 2 478899999998765 55567899999999999888777532
Q ss_pred ---ceEEEEeCCCEEEEE-------------cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEE
Q 016224 193 ---EVGCMISEGPWIFIG-------------VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAW 254 (393)
Q Consensus 193 ---~~~~~~~~~~~l~~~-------------~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vw 254 (393)
....+.++++.++++ .++.|.+||+.+++..........+..++|+|+ +|+++ ++.|.+|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 224455688888776 368999999998887644444556788899988 56666 6899999
Q ss_pred EeccCCccccCceeecCce--eeEEEEEEcCCEEEEecC-CC-----------------------cEEEeeCCCccee-e
Q 016224 255 KFNVTTNCFEPAASLKGHS--LAVVSLVVGANKLYSGSM-DN-----------------------SIRVWNLETLQCI-Q 307 (393)
Q Consensus 255 d~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~~l~sg~~-dg-----------------------~i~iwd~~~~~~~-~ 307 (393)
|+.++. ....+..+. ..+ .+..++..++..+. ++ .|.+||+.+++.. .
T Consensus 160 d~~~~~----~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 160 DPEAGT----LVEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp ETTTTE----EEEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred ECCCCc----EeeeeeccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 998763 222222211 111 33444544433332 22 4789999998764 2
Q ss_pred EeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEE
Q 016224 308 TLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFY 385 (393)
Q Consensus 308 ~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iw 385 (393)
.+..+...+..+.++ +++++++ ++.|.+||+.+++.+..+... ..+..++|+|++. +|++++.++.|++|
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~---~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP---HSYYSVNVSTDGS---TVWLGGALGDLAAY 306 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS---SCCCEEEECTTSC---EEEEESBSSEEEEE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC---CceeeEEECCCCC---EEEEEcCCCcEEEE
Confidence 234455667788888 5678777 799999999877665554432 3466788887655 78888899999999
Q ss_pred eCCceee
Q 016224 386 DLPSVII 392 (393)
Q Consensus 386 d~~s~~l 392 (393)
|+.++++
T Consensus 307 d~~~~~~ 313 (337)
T 1pby_B 307 DAETLEK 313 (337)
T ss_dssp ETTTCCE
T ss_pred ECcCCcE
Confidence 9998764
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=5e-20 Score=164.18 Aligned_cols=246 Identities=9% Similarity=0.013 Sum_probs=178.7
Q ss_pred ecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC-CeEEEEEecC--Cce--EEEEe
Q 016224 125 GEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS-GQCAGVINLG--GEV--GCMIS 199 (393)
Q Consensus 125 g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~~~--~~~--~~~~~ 199 (393)
++.++.|++||+.++ +.. .+..|...|.+++|+|++++|++++ ++.|.+||+.+ ++........ ..+ ..+.+
T Consensus 18 ~~~~~~i~~~d~~~~-~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTR-KMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CCCCEEEEEEETTTT-EEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCcceeEEEEeCCCC-cee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 567899999999987 544 4556899999999999999999987 78999999999 7766555443 222 45567
Q ss_pred CCCEEEEEc-----CCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EE-EEEeCCCcEEEEEeccCCccccCceeecC
Q 016224 200 EGPWIFIGV-----TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LL-FAGTQDGAILAWKFNVTTNCFEPAASLKG 271 (393)
Q Consensus 200 ~~~~l~~~~-----~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l-~~~~~dg~I~vwd~~~~~~~~~~~~~~~~ 271 (393)
++++++++. ...|..++..++....+..+. .+..++|+|+ .| +++..++.+.+|++.... .....+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~---~~~~~~~~ 170 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS---GVETRLTH 170 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTT---CCEEECCC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCC---CcceEccc
Confidence 888888764 236666666666654444443 4889999988 44 478889999999986543 22344556
Q ss_pred ceeeEEEEEEc--CCEEEEec-CCCcEEEeeCC-CcceeeEeccCccceEEEEEc--CCEEEEEeCC-----------Cc
Q 016224 272 HSLAVVSLVVG--ANKLYSGS-MDNSIRVWNLE-TLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLD-----------KT 334 (393)
Q Consensus 272 ~~~~v~~l~~~--~~~l~sg~-~dg~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~d-----------g~ 334 (393)
+...+.++.|+ +++|+.++ .++.+++|++. .+..+..+..|...+..+.|+ +++|++++.+ +.
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 67778888886 55666555 58999999986 566678888888889999998 6788877765 56
Q ss_pred EEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCC
Q 016224 335 IKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDN 380 (393)
Q Consensus 335 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg 380 (393)
|.+||+.+++.........+...+..+.|+|++. +|++++.|.
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~---~l~~~~~~~ 293 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD---EFAYVRYFP 293 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS---EEEEEEECC
T ss_pred EEEEecCCCCceeeeccCCCCcccccceECCCCC---EEEEEEecc
Confidence 9999998766544333223334577788887765 777766553
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=3.5e-19 Score=162.58 Aligned_cols=262 Identities=15% Similarity=0.216 Sum_probs=171.0
Q ss_pred EecCCCeEEEEECC-CC-cEEEEEecCCcCCEEEEEecCCCCEEEEEeCC-CcEEEEECC--CCe--EEEEEecCCce--
Q 016224 124 YGEKCKFLHSWTVG-DG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-ETVRVWDCA--SGQ--CAGVINLGGEV-- 194 (393)
Q Consensus 124 ~g~~dg~i~vwd~~-~~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d-g~v~iwd~~--~~~--~~~~~~~~~~~-- 194 (393)
+++.++.|++|++. ++ .+.+..+ .|...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+.....+
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTH 88 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSE
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcE
Confidence 34779999999985 33 2334444 477889999999999999999887 999999997 554 34444433333
Q ss_pred EEEEeCCCEEEEE--cCCeEEEEECC---CCceeeecCCCCcEEEEEEeCC--EEEEEe-CCCcEEEEEecc-CCccccC
Q 016224 195 GCMISEGPWIFIG--VTNFVKAWNTQ---TNTDLSLSGPVGQVYAMAVGND--LLFAGT-QDGAILAWKFNV-TTNCFEP 265 (393)
Q Consensus 195 ~~~~~~~~~l~~~--~~~~i~v~d~~---~~~~~~~~~~~~~v~~l~~~~~--~l~~~~-~dg~I~vwd~~~-~~~~~~~ 265 (393)
..+.+++++++++ .++.|.+|++. ..+..........+.+++|+++ .+++++ .++.|.+||+.. +.. ..
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~ 166 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL--VA 166 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--ee
Confidence 3445788877655 36789999994 3334444444556889999988 666666 899999999986 321 11
Q ss_pred ce--eec-CceeeEEEEEEc--CCEEE-EecCCCcEEEeeCCC--cce--eeEec---cC---ccceEEEEEc--CCEEE
Q 016224 266 AA--SLK-GHSLAVVSLVVG--ANKLY-SGSMDNSIRVWNLET--LQC--IQTLT---EH---TSVVMSLLCW--DQFLL 327 (393)
Q Consensus 266 ~~--~~~-~~~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~--~~~--~~~~~---~~---~~~v~~l~~~--~~~l~ 327 (393)
.. ... .....+..++++ +++++ ++..++.|.+||+.. ++. ...+. .. ...+..++|+ +++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 11 111 123356667775 55554 555899999999953 432 22222 11 2345678888 55666
Q ss_pred -EEeCCCcEEEEEcCC-CcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe-CCCeEEEEeC--Ccee
Q 016224 328 -SCSLDKTIKVWFATD-SGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC-NDNSVRFYDL--PSVI 391 (393)
Q Consensus 328 -s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s-~dg~I~iwd~--~s~~ 391 (393)
+...++.|.+||+.. ......+........+..++|+|++. +|++++ .++.|.+|++ .+++
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~---~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGK---YLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSS---EEEEECTTTCEEEEEEEETTTTE
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCC---EEEEecCCCCeEEEEEEcCCCce
Confidence 555799999999973 12222222222222367788887654 777776 6899999954 4543
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=3.6e-19 Score=167.86 Aligned_cols=227 Identities=10% Similarity=-0.046 Sum_probs=171.8
Q ss_pred CeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCC---cEEEEECCCCeEEEEEecCCceEE--EEeCCCE
Q 016224 129 KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE---TVRVWDCASGQCAGVINLGGEVGC--MISEGPW 203 (393)
Q Consensus 129 g~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg---~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~ 203 (393)
+.|++||+..+ ..+.+.+|...|.+++|+|++++|++++.|+ .|++||+.+++..........+.. +.++++.
T Consensus 159 ~~i~i~d~~g~--~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~ 236 (415)
T 2hqs_A 159 YELRVSDYDGY--NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSK 236 (415)
T ss_dssp EEEEEEETTSC--SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSE
T ss_pred ceEEEEcCCCC--CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCE
Confidence 79999999754 4567778999999999999999999999885 999999999988765555544433 4468887
Q ss_pred EE-EE-cCC--eEEEEECCCCceeeecCCCCcEEEEEEeCC--EEEEEeC-CC--cEEEEEeccCCccccCceeecCcee
Q 016224 204 IF-IG-VTN--FVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQ-DG--AILAWKFNVTTNCFEPAASLKGHSL 274 (393)
Q Consensus 204 l~-~~-~~~--~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~-dg--~I~vwd~~~~~~~~~~~~~~~~~~~ 274 (393)
|+ ++ .++ .|++||+.+++...+..+...+.+++|+|+ .|++++. ++ .|++||+.++. ...+..+..
T Consensus 237 la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-----~~~l~~~~~ 311 (415)
T 2hqs_A 237 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-----PQRITWEGS 311 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-----CEECCCSSS
T ss_pred EEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-----EEEEecCCC
Confidence 77 44 333 699999999988888888899999999998 6776665 45 57777776653 233344556
Q ss_pred eEEEEEEc--CCEEEEecCC---CcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCC---cEEEEEcCCCc
Q 016224 275 AVVSLVVG--ANKLYSGSMD---NSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDK---TIKVWFATDSG 344 (393)
Q Consensus 275 ~v~~l~~~--~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg---~i~iwd~~~~~ 344 (393)
.+..++|+ +++|++++.+ ..|++||+.+++. ..+..+. .+.++.|+ +++|++++.++ .|++||+. ++
T Consensus 312 ~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~ 388 (415)
T 2hqs_A 312 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GR 388 (415)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SC
T ss_pred cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CC
Confidence 67777775 6678777654 5899999998876 4555554 78899998 67888888777 79999986 44
Q ss_pred ceEEEEeecCCccEEEEEeeeCC
Q 016224 345 NLEVTYTHNEEHGVLALCGMPDS 367 (393)
Q Consensus 345 ~~~~~~~~~~~~~v~~~~~~~~~ 367 (393)
....+..+. ..+..++|+|..
T Consensus 389 ~~~~l~~~~--~~v~~~~~~~~~ 409 (415)
T 2hqs_A 389 FKARLPATD--GQVKFPAWSPYL 409 (415)
T ss_dssp CEEECCCSS--SEEEEEEECCCC
T ss_pred cEEEeeCCC--CCCcCCcccccc
Confidence 455554443 459999998864
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=1e-17 Score=153.62 Aligned_cols=257 Identities=11% Similarity=0.072 Sum_probs=183.9
Q ss_pred ecceEEeeEecCc--EEEecC-------CCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE-eCCCcEEEEE
Q 016224 109 KTDILCRNWVQGN--CMYGEK-------CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG-SKDETVRVWD 178 (393)
Q Consensus 109 ~~~i~c~~~~~~~--~~~g~~-------dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd 178 (393)
...+..+.|++++ +++++. ++.|.+||..++ +.+..+.. ...+..++|+|++++++.+ ..++.|.+||
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL-EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC-CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3466788998873 444442 678999999988 67777663 3457789999999966554 5579999999
Q ss_pred CCCCeEEEEEecCCc----------e--EEEEeCCCEEEEEc---CCeEEEEECCCCceeeecC-CCCcEEEEEEeCC--
Q 016224 179 CASGQCAGVINLGGE----------V--GCMISEGPWIFIGV---TNFVKAWNTQTNTDLSLSG-PVGQVYAMAVGND-- 240 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~----------~--~~~~~~~~~l~~~~---~~~i~v~d~~~~~~~~~~~-~~~~v~~l~~~~~-- 240 (393)
..+++.+..+..+.. . ..+.++++.++++. ++.|.+||..+++...... +...+..+.|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 999999888876431 2 34456888777653 6789999999998874433 5666888999987
Q ss_pred EEEEEeCCCcEEEEEeccCCccccCceeec----CceeeEEEEEEc--CCEEEEec-CCCcEEEeeCCCcceeeEeccCc
Q 016224 241 LLFAGTQDGAILAWKFNVTTNCFEPAASLK----GHSLAVVSLVVG--ANKLYSGS-MDNSIRVWNLETLQCIQTLTEHT 313 (393)
Q Consensus 241 ~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~----~~~~~v~~l~~~--~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~ 313 (393)
.|++++.++.|.+||+.+... ...+. ++...+..++++ ++++++++ .++.|.+||+.+++.+..+....
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKI----LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEE----EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred EEEEEcCCCeEEEEECCCCeE----EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 888889999999999987632 22222 234455556664 66665555 55999999999999988887554
Q ss_pred cceEEEEEc--CCEEEEE-eCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCC
Q 016224 314 SVVMSLLCW--DQFLLSC-SLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCND 379 (393)
Q Consensus 314 ~~v~~l~~~--~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~d 379 (393)
. ..+.++ +++++++ ..++.|.+||+.+++.+..+.. ......++|+|++. +|+.+..+
T Consensus 274 ~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~---~l~v~~~~ 334 (353)
T 3vgz_A 274 S--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGK---TLYVSVKQ 334 (353)
T ss_dssp C--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSC---EEEEEEEC
T ss_pred C--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCC---EEEEEEcc
Confidence 3 346665 6655544 4789999999988776655443 23477888887754 56555544
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=8.3e-19 Score=177.50 Aligned_cols=270 Identities=9% Similarity=0.025 Sum_probs=188.2
Q ss_pred ceEEeeEecCc--EEEecC-CC-----eEEEEECCCCcEEEEEecCCcC------------------------CEEEEEe
Q 016224 111 DILCRNWVQGN--CMYGEK-CK-----FLHSWTVGDGFKLLTQLEGHQK------------------------VVSGITL 158 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~-dg-----~i~vwd~~~~~~~~~~l~~h~~------------------------~I~~i~~ 158 (393)
.+..++|++++ +++++. |+ .|++||+.++ +....+..|.. .|.+++|
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG-QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC-CEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC-ceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 67899999874 556666 77 9999999988 66666655443 3789999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCC---eEEEEEecCCce--EEEEeCCCEEEEEcCCeEEEEECCCCceeeecCC-CCc-
Q 016224 159 PSGSDKLYSGSKDETVRVWDCASG---QCAGVINLGGEV--GCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGP-VGQ- 231 (393)
Q Consensus 159 s~~~~~l~s~s~dg~v~iwd~~~~---~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~-~~~- 231 (393)
+||+++|++++. +.|.+||+.++ +..........+ ..+.++++.|+.+.++.|++||+.+++...+... ...
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 195 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTI 195 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSSE
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccce
Confidence 999999999987 89999999988 544333333333 3455799999988888999999999877644332 221
Q ss_pred ---------------EEEEEEeCC--EEEEEeCCC---------------------------------cEEEEEecc-CC
Q 016224 232 ---------------VYAMAVGND--LLFAGTQDG---------------------------------AILAWKFNV-TT 260 (393)
Q Consensus 232 ---------------v~~l~~~~~--~l~~~~~dg---------------------------------~I~vwd~~~-~~ 260 (393)
+..+.|+|| .|++++.|+ .|.+||+.+ +.
T Consensus 196 ~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 275 (741)
T 2ecf_A 196 GNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ 275 (741)
T ss_dssp EESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC
T ss_pred eccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc
Confidence 477999998 777776655 788888876 53
Q ss_pred ccccCceeecCceeeEEEEEE-cCCEEEEecC-----CCcEEEeeCCCcceeeEeccCcc----ceEEEEEc--CCEEEE
Q 016224 261 NCFEPAASLKGHSLAVVSLVV-GANKLYSGSM-----DNSIRVWNLETLQCIQTLTEHTS----VVMSLLCW--DQFLLS 328 (393)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~l~~-~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~~----~v~~l~~~--~~~l~s 328 (393)
. ..+.....|...+..++| ++++|++++. +..|++||+.+++....+..+.. .+..+.|+ ++++++
T Consensus 276 ~--~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 353 (741)
T 2ecf_A 276 T--QWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS 353 (741)
T ss_dssp C--EEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE
T ss_pred e--EEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE
Confidence 2 111111135566665554 5667776543 67899999999988777765543 34567777 678889
Q ss_pred EeCCCcEEEEEcCCCcceEEEEeecCCccEEEE-EeeeCCCCCcEEEEEeCCC--eEEEEeCC
Q 016224 329 CSLDKTIKVWFATDSGNLEVTYTHNEEHGVLAL-CGMPDSEGKPVLLCSCNDN--SVRFYDLP 388 (393)
Q Consensus 329 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~l~s~s~dg--~I~iwd~~ 388 (393)
++.|+.++||.+........+..+ ...+..+ .|+|++. .++++++.++ .++||++.
T Consensus 354 ~~~~g~~~l~~~~~~~~~~~l~~~--~~~v~~~~~~s~dg~--~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 354 SERTGFQHLYRIDSKGKAAALTHG--NWSVDELLAVDEKAG--LAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp ECTTSSCEEEEECSSSCEEESCCS--SSCEEEEEEEETTTT--EEEEEECSSCTTCBEEEEEE
T ss_pred ecCCCccEEEEEcCCCCeeeeeec--ceEEEeEeEEeCCCC--EEEEEEeCCCCceEEEEEEE
Confidence 999998888877532223333333 3346666 4887754 2445666666 89999875
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=1.2e-18 Score=175.48 Aligned_cols=270 Identities=9% Similarity=-0.009 Sum_probs=189.8
Q ss_pred cceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC-----CeE
Q 016224 110 TDILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS-----GQC 184 (393)
Q Consensus 110 ~~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~-----~~~ 184 (393)
..+.+++|+++..++.+.++.|++||+.++ +.. .+..+...+.+++|+|||++|+++ .|+.|++||+.+ ++.
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~d~~~~-~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGFDMLAR-KVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEEETTTT-EEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCCCeEEEEECCEEEEEECCCC-ceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 468999999987766667799999999887 544 445577789999999999999995 679999999998 776
Q ss_pred EEEEecCC-----------------ceEEEEeCCCEEEEEc----------------------------------CCeEE
Q 016224 185 AGVINLGG-----------------EVGCMISEGPWIFIGV----------------------------------TNFVK 213 (393)
Q Consensus 185 ~~~~~~~~-----------------~~~~~~~~~~~l~~~~----------------------------------~~~i~ 213 (393)
........ ....+.++++.|+++. +..|.
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 65443332 2344567899888753 24799
Q ss_pred EEECCCCceeeec---CCCCcEEEEEEeCC--EEEEEeCCC-----cEEEEEeccCCccccCceeecCcee---eEEEEE
Q 016224 214 AWNTQTNTDLSLS---GPVGQVYAMAVGND--LLFAGTQDG-----AILAWKFNVTTNCFEPAASLKGHSL---AVVSLV 280 (393)
Q Consensus 214 v~d~~~~~~~~~~---~~~~~v~~l~~~~~--~l~~~~~dg-----~I~vwd~~~~~~~~~~~~~~~~~~~---~v~~l~ 280 (393)
+||+.+++...+. .+...+..++|+|+ .|++++.++ .|++||+.++... ..+.. ..+.. .+..+.
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-~~~~~-~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-RTLFV-ETDKHYVEPLHPLT 316 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-EEEEE-EECSSCCCCCSCCE
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-eEEEE-ccCCCeECccCCce
Confidence 9999998866433 46678999999998 677777665 8999998876211 11111 11111 123344
Q ss_pred E----cCCEEEEecCCCcEEEeeCC-CcceeeEeccCccceEE-EEEc--CCEEEEE-eCCC----cEEEEEcCCCcceE
Q 016224 281 V----GANKLYSGSMDNSIRVWNLE-TLQCIQTLTEHTSVVMS-LLCW--DQFLLSC-SLDK----TIKVWFATDSGNLE 347 (393)
Q Consensus 281 ~----~~~~l~sg~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~-l~~~--~~~l~s~-s~dg----~i~iwd~~~~~~~~ 347 (393)
| ++++++++..|+.++||++. +++.+..+..+...+.. +.|+ ++.|+.+ +.++ .|..||+.++. ..
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~ 395 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TK 395 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CE
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ce
Confidence 4 55688899999999999886 67778888888877876 6887 5566544 4444 56666765543 22
Q ss_pred EEEeecCCccEEEEEeeeCCCCCcEEEEEeC-C---CeEEEEeCCcee
Q 016224 348 VTYTHNEEHGVLALCGMPDSEGKPVLLCSCN-D---NSVRFYDLPSVI 391 (393)
Q Consensus 348 ~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~-d---g~I~iwd~~s~~ 391 (393)
.+. + ...+..++|+|++. +|+.... + +.|++||+.+++
T Consensus 396 ~l~-~--~~~~~~~~~spdg~---~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 396 DLT-P--ESGMHRTQLSPDGS---AIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ESC-C--SSSEEEEEECTTSS---EEEEEEECSSCSCEEEEEESSSCE
T ss_pred ecc-C--CCceEEEEECCCCC---EEEEEecCCCCCcEEEEEECCCCe
Confidence 222 2 33478889988765 6665543 3 569999998764
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=2.6e-18 Score=172.95 Aligned_cols=269 Identities=11% Similarity=0.040 Sum_probs=177.8
Q ss_pred eEEeeEecCcEEEecCCCeEEEEECCCCcEEE-EEecCCc-----------------CCEEEEEecCCCCEEEEEeCCCc
Q 016224 112 ILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLL-TQLEGHQ-----------------KVVSGITLPSGSDKLYSGSKDET 173 (393)
Q Consensus 112 i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~-~~l~~h~-----------------~~I~~i~~s~~~~~l~s~s~dg~ 173 (393)
+..+.|..+.+++++.++ | +||+.++ +.+ ..+..|. ..|.+++|+|| ++++.+. ++.
T Consensus 28 ~~~~~w~g~~~~~~~~~~-i-~~d~~tg-~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~ 102 (706)
T 2z3z_A 28 VVGLQWMGDNYVFIEGDD-L-VFNKANG-KSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGG 102 (706)
T ss_dssp CTTCEEETTEEEEEETTE-E-EEEC--------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTE
T ss_pred CCCCcCcCCeEEEEeCCc-E-EEECCCC-cEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCE
Confidence 344677755666777777 8 9999988 442 3333333 56999999999 6666554 599
Q ss_pred EEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEEcCCeEEEEECCC-----CceeeecC-CCCc--------------
Q 016224 174 VRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIGVTNFVKAWNTQT-----NTDLSLSG-PVGQ-------------- 231 (393)
Q Consensus 174 v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~v~d~~~-----~~~~~~~~-~~~~-------------- 231 (393)
|++||+.+++..........+ ..+.++++.|+...++.|++|++.+ ++...+.. +...
T Consensus 103 i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~ 182 (706)
T 2z3z_A 103 LVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGI 182 (706)
T ss_dssp EEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTC
T ss_pred EEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCC
Confidence 999999999877666544332 4566899999988999999999998 76654332 2222
Q ss_pred EEEEEEeCC--EEEEEe---------------------------------CCCcEEEEEeccCCccccCceeecCceeeE
Q 016224 232 VYAMAVGND--LLFAGT---------------------------------QDGAILAWKFNVTTNCFEPAASLKGHSLAV 276 (393)
Q Consensus 232 v~~l~~~~~--~l~~~~---------------------------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v 276 (393)
+.++.|+|+ .|++++ .+..|++||+.++.. ..+.....|...+
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~ 260 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT--VYLQTGEPKEKFL 260 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE--EECCCCSCTTCEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce--EeeccCCCCceeE
Confidence 478999998 777776 446799999987632 1111122466778
Q ss_pred EEEEEc--CCEEEEecCCC-----cEEEeeCCCcceeeEec-c-Ccc---ceEEEEEc----CCEEEEEeCCCcEEEEEc
Q 016224 277 VSLVVG--ANKLYSGSMDN-----SIRVWNLETLQCIQTLT-E-HTS---VVMSLLCW----DQFLLSCSLDKTIKVWFA 340 (393)
Q Consensus 277 ~~l~~~--~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~-~-~~~---~v~~l~~~----~~~l~s~s~dg~i~iwd~ 340 (393)
..++|+ +++|++++.++ .|++||+.+++....+. . +.. .+..+.|+ ++++++++.|+.++||++
T Consensus 261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEE
T ss_pred eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEE
Confidence 888885 56788877665 99999999984444332 1 221 23456664 468889999999999988
Q ss_pred C-CCcceEEEEeecCCccEEE-EEeeeCCCCCcEEEEEeCCC----eEEEEeCCcee
Q 016224 341 T-DSGNLEVTYTHNEEHGVLA-LCGMPDSEGKPVLLCSCNDN----SVRFYDLPSVI 391 (393)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~l~s~s~dg----~I~iwd~~s~~ 391 (393)
. +++.+..+..+ ...+.. +.|+|++. .++++++.++ .|..||+.+++
T Consensus 341 ~~~~~~~~~l~~~--~~~v~~~~~~spdg~--~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 341 DTTGRLIRQVTKG--EWEVTNFAGFDPKGT--RLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp ETTSCEEEECCCS--SSCEEEEEEECTTSS--EEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ECCCCEEEecCCC--CeEEEeeeEEcCCCC--EEEEEecCCCCceEEEEEEEcCCCC
Confidence 6 44444444333 233555 68877654 2444555555 67778877653
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=4.8e-18 Score=178.27 Aligned_cols=269 Identities=12% Similarity=0.039 Sum_probs=205.3
Q ss_pred ceeecceEEeeEecCcEE-EecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeE
Q 016224 106 AVIKTDILCRNWVQGNCM-YGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQC 184 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~~~-~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 184 (393)
..|...+.+..|+++.++ +++.++.+.||.+.........+..|. .+..++|+|++++|+++. ++.|.+||+...+.
T Consensus 200 ~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l 277 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKI 277 (1045)
T ss_dssp ECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCE
T ss_pred cCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceEe
Confidence 456678899999988655 467788889998653213445666665 456779999999999874 89999999955443
Q ss_pred EEEEecC--------------CceEEEE-eCCCEEEEEcCCeEEEEECCCCceeeecCCCC-cEEEEEEeCC--EEEEEe
Q 016224 185 AGVINLG--------------GEVGCMI-SEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVG-QVYAMAVGND--LLFAGT 246 (393)
Q Consensus 185 ~~~~~~~--------------~~~~~~~-~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~-~v~~l~~~~~--~l~~~~ 246 (393)
. .+... .....+. ++++.++.+.++.|.+|+...+....+..+.. .+..+.|+ + .|++++
T Consensus 278 ~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s 355 (1045)
T 1k32_A 278 E-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGT 355 (1045)
T ss_dssp E-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEE
T ss_pred e-eeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEE
Confidence 3 44331 2335567 88988888889999999999988777777877 89999999 8 778888
Q ss_pred CCCcEE-EEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc-
Q 016224 247 QDGAIL-AWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW- 322 (393)
Q Consensus 247 ~dg~I~-vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~- 322 (393)
.+..|. +||+..+. ...+..|...+..++|+ +++|++++.++.|++||+.+++....+..|...+.+++|+
T Consensus 356 ~~~~l~~~~d~~~~~-----~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp 430 (1045)
T 1k32_A 356 REGDFLGIYDYRTGK-----AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD 430 (1045)
T ss_dssp TTEEEEEEEETTTCC-----EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT
T ss_pred CCCceEEEEECCCCC-----ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC
Confidence 888888 88887652 12333666778888875 6689999999999999999999888887899899999998
Q ss_pred -CCEEEEEeCCC----------cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 323 -DQFLLSCSLDK----------TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 323 -~~~l~s~s~dg----------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+++|++++.++ .|++||+.+++ ...+..+ ...+..+.|+|++. +|++++.++...+|+...
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~--~~~~~~~~~spdG~---~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTE--NSHDYAPAFDADSK---NLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCS--SSBEEEEEECTTSC---EEEEEESCCCCCEECSSS
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCC--CcccCCceEcCCCC---EEEEEecccCCcCcchhc
Confidence 67888877654 89999998765 4333333 33477788988766 899999988888887643
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=9.3e-17 Score=147.24 Aligned_cols=234 Identities=11% Similarity=0.073 Sum_probs=169.7
Q ss_pred CcCCEEEEEecCCCCEEEEEeC-------CCcEEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEE--cCCeEEEEEC
Q 016224 149 HQKVVSGITLPSGSDKLYSGSK-------DETVRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIG--VTNFVKAWNT 217 (393)
Q Consensus 149 h~~~I~~i~~s~~~~~l~s~s~-------dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~i~v~d~ 217 (393)
....+..++|+|++++|++++. ++.|.+||..+++.+..+...... ..+.++++.++++ .++.|.+||.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 4467889999999999988874 568999999999998888765433 4456788866554 4579999999
Q ss_pred CCCcee-eecCCCC---------cEEEEEEeCC--EEEEEe--CCCcEEEEEeccCCccccCceeecCceeeEEEEEE--
Q 016224 218 QTNTDL-SLSGPVG---------QVYAMAVGND--LLFAGT--QDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVV-- 281 (393)
Q Consensus 218 ~~~~~~-~~~~~~~---------~v~~l~~~~~--~l~~~~--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~-- 281 (393)
.+++.. .+..+.. .+..+.++++ .++++. .++.|.+||+.+. +....+..+...+..+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI----KLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT----EEEEEECCCCTTCCCCEEET
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC----ceEEEecCCCCccceEEECC
Confidence 998876 3333221 2788999987 555554 5889999999876 333444423333444444
Q ss_pred cCCEEEEecCCCcEEEeeCCCcceeeEecc----CccceEEEEEc--CCEEEEEeC-CCcEEEEEcCCCcceEEEEeecC
Q 016224 282 GANKLYSGSMDNSIRVWNLETLQCIQTLTE----HTSVVMSLLCW--DQFLLSCSL-DKTIKVWFATDSGNLEVTYTHNE 354 (393)
Q Consensus 282 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~l~~~--~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~ 354 (393)
+++++++++.++.|.+||+.+++.+..+.. +...+..++++ ++++++++. ++.|.+||+.+++....+....
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 273 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE- 273 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-
Confidence 677899999999999999999998887764 45567778887 666665554 5999999998877666555322
Q ss_pred CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 355 EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 355 ~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
...+.|+|++. .++++...++.|.+||+.++++
T Consensus 274 ---~~~~~~s~dg~--~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 274 ---SLAVLFNPARN--EAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp ---CCCEEEETTTT--EEEEEETTTTEEEEEETTTTEE
T ss_pred ---CceEEECCCCC--EEEEEECCCCeEEEEECCCCeE
Confidence 24577777654 2445555799999999998764
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=2.2e-18 Score=173.80 Aligned_cols=268 Identities=9% Similarity=0.036 Sum_probs=180.8
Q ss_pred ceEEeeEecCc-EEEecCCCeEEEEECCCCcEEEEEecCCcC---CEEEEEecCCCCEEEEEeCC---------CcEEEE
Q 016224 111 DILCRNWVQGN-CMYGEKCKFLHSWTVGDGFKLLTQLEGHQK---VVSGITLPSGSDKLYSGSKD---------ETVRVW 177 (393)
Q Consensus 111 ~i~c~~~~~~~-~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~---~I~~i~~s~~~~~l~s~s~d---------g~v~iw 177 (393)
....+.|++++ +++.+.||.|++||+.++ +....+..|.. .|.+++|||||++|++++.+ +.|.+|
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g-~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETN-TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGC-CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCC-cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 35677888774 445578999999999988 66677777765 49999999999999999875 788899
Q ss_pred ECCCCeEEEEEecC-C-----ceEEEEeCCCEEEEEcCCeEEEEECCCCceeeec-CCCCc------------------E
Q 016224 178 DCASGQCAGVINLG-G-----EVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLS-GPVGQ------------------V 232 (393)
Q Consensus 178 d~~~~~~~~~~~~~-~-----~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~-~~~~~------------------v 232 (393)
|+.+++. ..+... . ....+.++++.|+.+.++.|++|++.+++...+. .+... +
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9999876 333221 1 1234567999999888899999999988766433 22322 3
Q ss_pred EEEEEeCC--EEEEEeCCC----------------------------------cEEEEEeccCCccccCceeecC-----
Q 016224 233 YAMAVGND--LLFAGTQDG----------------------------------AILAWKFNVTTNCFEPAASLKG----- 271 (393)
Q Consensus 233 ~~l~~~~~--~l~~~~~dg----------------------------------~I~vwd~~~~~~~~~~~~~~~~----- 271 (393)
.++.|+|| .|++++.++ .|++||+.++.. ...+..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~ 251 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH----DLEMMPPDDPR 251 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC----CEECCCCCCGG
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce----eEEeeCCccCC
Confidence 78999998 777766543 789999887632 222332
Q ss_pred -ceeeEEEEEEc--CCEEEEec----CCCcEEEeeCCCcceeeEeccC-ccce----EEEEEc--CCEEEE--EeCCC--
Q 016224 272 -HSLAVVSLVVG--ANKLYSGS----MDNSIRVWNLETLQCIQTLTEH-TSVV----MSLLCW--DQFLLS--CSLDK-- 333 (393)
Q Consensus 272 -~~~~v~~l~~~--~~~l~sg~----~dg~i~iwd~~~~~~~~~~~~~-~~~v----~~l~~~--~~~l~s--~s~dg-- 333 (393)
+...+..++|+ +++|++.. .+..|++||+.++++...+..+ ...+ ..+.|+ ++.|+. ...++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 35678888886 44665553 3468999999999877666433 3333 267777 555543 55677
Q ss_pred ----cEEEEEcCCCcc---eEEEEeecCCccEEE-EEeeeCCCCCcEEEEEeC-C--CeEEEEeCCc
Q 016224 334 ----TIKVWFATDSGN---LEVTYTHNEEHGVLA-LCGMPDSEGKPVLLCSCN-D--NSVRFYDLPS 389 (393)
Q Consensus 334 ----~i~iwd~~~~~~---~~~~~~~~~~~~v~~-~~~~~~~~~~~~l~s~s~-d--g~I~iwd~~s 389 (393)
.|.+||+.+... ...+... ...+.. +.|+|++. .|+..+. + +.++||++..
T Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~~~~~spdg~---~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 332 GKFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAYDEKGN---KIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEEETTTT---EEEEEESSSCTTCCEEEEECS
T ss_pred cceeEEEEEeccCCCCccceeEeecC--CeEEEeeeEEcCCCC---EEEEEEcCCCCcceEEEEEeC
Confidence 466677323333 3333221 222443 58888765 6665544 4 8899999853
No 142
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=4.4e-16 Score=143.69 Aligned_cols=262 Identities=13% Similarity=0.166 Sum_probs=166.3
Q ss_pred cCCCeEEEEECC--CC-cEEEEEecCCcCCEEEEEecCCCCEEEEEeCC----CcEEEEECCC--CeE--EEEEe-cCCc
Q 016224 126 EKCKFLHSWTVG--DG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD----ETVRVWDCAS--GQC--AGVIN-LGGE 193 (393)
Q Consensus 126 ~~dg~i~vwd~~--~~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d----g~v~iwd~~~--~~~--~~~~~-~~~~ 193 (393)
+.++.|++|.++ ++ .+.+..+ +...+..++|+|++++|++++.+ +.|.+|++.. ++. +.... ....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 456789998764 44 2233333 77788889999999999999986 7999998865 443 33333 2233
Q ss_pred eEEEEeCCCEEEEE--cCCeEEEEECCCCcee-ee------c--------CCCCcEEEEEEeCC--EEEE-EeCCCcEEE
Q 016224 194 VGCMISEGPWIFIG--VTNFVKAWNTQTNTDL-SL------S--------GPVGQVYAMAVGND--LLFA-GTQDGAILA 253 (393)
Q Consensus 194 ~~~~~~~~~~l~~~--~~~~i~v~d~~~~~~~-~~------~--------~~~~~v~~l~~~~~--~l~~-~~~dg~I~v 253 (393)
...+..++++++++ .++.|.+|++.....+ .. . .+...+.+++|+|+ +|++ ...++.|.+
T Consensus 102 p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v 181 (361)
T 3scy_A 102 PCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHK 181 (361)
T ss_dssp EEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEE
Confidence 33333488877765 5679999999754332 11 1 11234688999998 4544 445889999
Q ss_pred EEeccCCc----c-ccCc----eeecCceeeEEEEEEc--CCEEEEec-CCCcEEEeeCCCcce--eeEec---cCccce
Q 016224 254 WKFNVTTN----C-FEPA----ASLKGHSLAVVSLVVG--ANKLYSGS-MDNSIRVWNLETLQC--IQTLT---EHTSVV 316 (393)
Q Consensus 254 wd~~~~~~----~-~~~~----~~~~~~~~~v~~l~~~--~~~l~sg~-~dg~i~iwd~~~~~~--~~~~~---~~~~~v 316 (393)
|++..... . +... .....+......++|+ ++++++++ .++.|.+||+.+++. +..+. .+....
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 182 FNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp EEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE
T ss_pred EEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc
Confidence 99986532 1 1110 1112223345566765 55666665 689999999987654 33332 233446
Q ss_pred EEEEEc--CCEEEEEeC--CCcEEEEEcCC-CcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe-CCCeEEEE--eCC
Q 016224 317 MSLLCW--DQFLLSCSL--DKTIKVWFATD-SGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC-NDNSVRFY--DLP 388 (393)
Q Consensus 317 ~~l~~~--~~~l~s~s~--dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s-~dg~I~iw--d~~ 388 (393)
..++|+ +++|+++.. ++.|.+|++.. ...+..+........+..++|+|++. +|++++ .++.|.+| |..
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~---~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGK---YLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSC---EEEEEETTTTEEEEEEECTT
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCC---EEEEEECCCCCEEEEEEECC
Confidence 788887 677766655 48999999962 23332322222234567888888765 777776 67999995 555
Q ss_pred ceee
Q 016224 389 SVII 392 (393)
Q Consensus 389 s~~l 392 (393)
++++
T Consensus 339 ~g~~ 342 (361)
T 3scy_A 339 TGLL 342 (361)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 6654
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=8.2e-17 Score=146.78 Aligned_cols=257 Identities=9% Similarity=0.089 Sum_probs=167.2
Q ss_pred eecceEEeeEecCc--EEEecCC-CeEEEEECC--CC-cEEEEEecCCcCCEEEEEecCCCCEEEEEeC-CCcEEEEECC
Q 016224 108 IKTDILCRNWVQGN--CMYGEKC-KFLHSWTVG--DG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSK-DETVRVWDCA 180 (393)
Q Consensus 108 ~~~~i~c~~~~~~~--~~~g~~d-g~i~vwd~~--~~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~-dg~v~iwd~~ 180 (393)
+...+.+++|++++ +++++.+ +.|.+|++. ++ .+.+..+..+. .+..++|+|++++|++++. ++.|.+||+.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 34467889998774 4555555 999999997 44 24455666554 7899999999998877765 8899999994
Q ss_pred ---CCeEEEEEecCCce--EEEEeCCCEEEEE--cCCeEEEEECCC-Ccee-----eec-CCCCcEEEEEEeCC--EEE-
Q 016224 181 ---SGQCAGVINLGGEV--GCMISEGPWIFIG--VTNFVKAWNTQT-NTDL-----SLS-GPVGQVYAMAVGND--LLF- 243 (393)
Q Consensus 181 ---~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~i~v~d~~~-~~~~-----~~~-~~~~~v~~l~~~~~--~l~- 243 (393)
+.+.+..+.....+ ..+.++++.++++ .++.|.+|++.+ ++.. ... .....+..++|+|+ +++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~ 194 (343)
T 1ri6_A 115 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC 194 (343)
T ss_dssp TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred CCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEE
Confidence 44455555544433 3345678776665 678999999987 5443 122 23457889999998 454
Q ss_pred EEeCCCcEEEEEeccCCccccCceeec----Cc--eeeEEEEEEc--CCEEE-EecCCCcEEEeeCC----CcceeeEec
Q 016224 244 AGTQDGAILAWKFNVTTNCFEPAASLK----GH--SLAVVSLVVG--ANKLY-SGSMDNSIRVWNLE----TLQCIQTLT 310 (393)
Q Consensus 244 ~~~~dg~I~vwd~~~~~~~~~~~~~~~----~~--~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~----~~~~~~~~~ 310 (393)
++..++.|.+|++.............. .+ ...+..++++ +++|+ +...++.|.+||+. +.+.+..+.
T Consensus 195 ~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 195 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred EeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec
Confidence 455889999999965322111111111 11 2345567775 55665 56689999999998 345555565
Q ss_pred cCccceEEEEEc--CCEEEEEe-CCCcEEEEEcC--CCcceEEEEeecCCccEEEEEeeeCC
Q 016224 311 EHTSVVMSLLCW--DQFLLSCS-LDKTIKVWFAT--DSGNLEVTYTHNEEHGVLALCGMPDS 367 (393)
Q Consensus 311 ~~~~~v~~l~~~--~~~l~s~s-~dg~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~ 367 (393)
.+.. +..++|+ +++|++++ .++.|.+|++. ++. +..+...........+++.++.
T Consensus 275 ~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~-~~~~~~~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 275 TETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL-LHEKGRYAVGQGPMWVVVNAHE 334 (343)
T ss_dssp CSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE-EEEEEEEECSSSCCEEEEEEEC
T ss_pred CCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCce-eeEccccccCCCCeeEEEEccc
Confidence 5544 7788887 67777777 68999999654 332 2333222222335556666543
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=5.2e-16 Score=142.33 Aligned_cols=261 Identities=12% Similarity=0.128 Sum_probs=162.6
Q ss_pred cCCCeEEEEECC--CCcEEEE-EecCCcCCEEEEEecCCCCEEEEEeC---CCcEEEEECCCCeE--EEEEe-cCC--ce
Q 016224 126 EKCKFLHSWTVG--DGFKLLT-QLEGHQKVVSGITLPSGSDKLYSGSK---DETVRVWDCASGQC--AGVIN-LGG--EV 194 (393)
Q Consensus 126 ~~dg~i~vwd~~--~~~~~~~-~l~~h~~~I~~i~~s~~~~~l~s~s~---dg~v~iwd~~~~~~--~~~~~-~~~--~~ 194 (393)
+.++.|++|+++ ++ ++.. ....+...+..++|+|+++ |++++. ++.|.+|++.+++. +..+. ... ..
T Consensus 13 ~~~~~i~v~~~d~~tg-~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAK-TLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SSCCEEEEEEEETTTT-EEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCCCCEEEEEEcCCCC-eEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 345667777654 45 3322 3344567788899999999 665554 68999999987763 33321 222 23
Q ss_pred EEEEeCCCEEEEE--cCCeEEEEECCC-Ccee---eecC---------CCCcEEEEEEeCC--EEEEEeCCCcEEEEEec
Q 016224 195 GCMISEGPWIFIG--VTNFVKAWNTQT-NTDL---SLSG---------PVGQVYAMAVGND--LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 195 ~~~~~~~~~l~~~--~~~~i~v~d~~~-~~~~---~~~~---------~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~ 257 (393)
..+.+++++|+++ .++.|.+|++.. +... .+.. ....+.+++|+|+ ++++...++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 4566789877765 467999999963 3322 1111 1234889999988 66677778999999998
Q ss_pred cCCccccCceeecC-ceeeEEEEEEc--CCEEE-EecCCCcEEEeeCCC--cce--eeEeccCc------cceEEEEEc-
Q 016224 258 VTTNCFEPAASLKG-HSLAVVSLVVG--ANKLY-SGSMDNSIRVWNLET--LQC--IQTLTEHT------SVVMSLLCW- 322 (393)
Q Consensus 258 ~~~~~~~~~~~~~~-~~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~--~~~--~~~~~~~~------~~v~~l~~~- 322 (393)
.... ......+.. .......++++ +++++ +...++.|.+|++.. ++. +..+.... ..+..++|+
T Consensus 171 ~~g~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 171 DAGQ-LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp TTSC-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCCc-EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 3211 111111111 12234556665 56554 466789999999874 443 23333222 347788888
Q ss_pred -CCEE-EEEeCCCcEEEEEcCCCcceEEEEeecC-CccEEEEEeeeCCCCCcEEEEEeC-CCeEEEE--eCCceee
Q 016224 323 -DQFL-LSCSLDKTIKVWFATDSGNLEVTYTHNE-EHGVLALCGMPDSEGKPVLLCSCN-DNSVRFY--DLPSVII 392 (393)
Q Consensus 323 -~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~l~s~s~-dg~I~iw--d~~s~~l 392 (393)
+++| ++...++.|.+|++.....+..+..... ...+..++|+|++. +|++++. ++.|.+| |..++++
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~---~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA---FVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS---EEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC---EEEEEEcCCCcEEEEEEeCCCCeE
Confidence 6666 5566789999999974433333332222 23467888887755 7777765 5899999 5566654
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=1.5e-17 Score=157.54 Aligned_cols=192 Identities=14% Similarity=0.110 Sum_probs=138.6
Q ss_pred ceEEeeEecC--cEEEecCCCeEEEEECCCC----------cEEE-----EEecCCcCCEEEEEecCCCCEEE----EEe
Q 016224 111 DILCRNWVQG--NCMYGEKCKFLHSWTVGDG----------FKLL-----TQLEGHQKVVSGITLPSGSDKLY----SGS 169 (393)
Q Consensus 111 ~i~c~~~~~~--~~~~g~~dg~i~vwd~~~~----------~~~~-----~~l~~h~~~I~~i~~s~~~~~l~----s~s 169 (393)
.+.++++++. .+++++.++ +++|+.... .... ..+ .|...|++++|+|++++|+ +++
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEeccC
Confidence 4567777754 344566666 888875310 0111 112 3667899999999999999 788
Q ss_pred CCCcEEEEECCCCe--------EEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC-
Q 016224 170 KDETVRVWDCASGQ--------CAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND- 240 (393)
Q Consensus 170 ~dg~v~iwd~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~- 240 (393)
.|++|+|||+.++. .+.. ...+.+|...|.+++|+|+
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~----------------------------------~~~~~~h~~~V~~v~~~p~~ 161 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAY----------------------------------HKLLKDAGGMVIDMKWNPTV 161 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEE----------------------------------EECCCSGGGSEEEEEECSSC
T ss_pred CCceEEEEEccccccCCcCCcceeee----------------------------------eeccCCCCCceEEEEECCCC
Confidence 99999999986541 1100 1134568899999999985
Q ss_pred --EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccC----
Q 016224 241 --LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEH---- 312 (393)
Q Consensus 241 --~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~---- 312 (393)
+|++++.||+|++||+++. .......+|...|.+++|+ +++|++|+.||.|++||++ ++....+..|
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~----~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTET----VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYE 236 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSS----EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCC
T ss_pred CCEEEEEECCCeEEEEEcCCC----cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccC
Confidence 8999999999999999886 2334455688899999997 6699999999999999998 5666655443
Q ss_pred ---ccceEEEEEcCC--EEEE-EeCCCc------EEEEEcCCC
Q 016224 313 ---TSVVMSLLCWDQ--FLLS-CSLDKT------IKVWFATDS 343 (393)
Q Consensus 313 ---~~~v~~l~~~~~--~l~s-~s~dg~------i~iwd~~~~ 343 (393)
...+.++.|+++ ++++ ...||. +++|+++..
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 337899999843 3332 334433 899999764
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=1.6e-17 Score=157.24 Aligned_cols=227 Identities=14% Similarity=0.061 Sum_probs=157.2
Q ss_pred CeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEc
Q 016224 129 KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGV 208 (393)
Q Consensus 129 g~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 208 (393)
+.+++|+.... .+...+..+++++++.+|++++.|+ +++|+....... .....
T Consensus 23 ~~vri~~~~~~--------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~--~~~~~---------------- 75 (434)
T 2oit_A 23 KKVRIFDSPEE--------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQ--NKPGD---------------- 75 (434)
T ss_dssp CEEECSCCCSS--------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCC--CCTTC----------------
T ss_pred eeEEecCCccc--------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhh--ccccc----------------
Confidence 46788764321 2345678899999999999999998 899875421100 00000
Q ss_pred CCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EEE----EEeCCCcEEEEEeccCC-----c--cccCceeecCceee
Q 016224 209 TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLF----AGTQDGAILAWKFNVTT-----N--CFEPAASLKGHSLA 275 (393)
Q Consensus 209 ~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~----~~~~dg~I~vwd~~~~~-----~--~~~~~~~~~~~~~~ 275 (393)
....+...... ....+...|.+++|+++ +|+ +++.|+.|++||+.... . .......+.+|...
T Consensus 76 -~~~~~~~~~~~---~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~ 151 (434)
T 2oit_A 76 -DPNKIVDKVQG---LLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGM 151 (434)
T ss_dssp -CTTCEEECCCC---EEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGS
T ss_pred -CcccccccCcc---ccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCc
Confidence 00000000000 11245678999999998 777 78889999999997641 0 01123455679999
Q ss_pred EEEEEEcC---CEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEE
Q 016224 276 VVSLVVGA---NKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTY 350 (393)
Q Consensus 276 v~~l~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 350 (393)
|.+++|++ ++|++++.||+|++||+++++.+.....|...|.+++|+ +++|++|+.||+|++||++ +.....+.
T Consensus 152 V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 152 VIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred eEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 99999974 589999999999999999988777777899999999998 7799999999999999997 44444443
Q ss_pred eecC-----CccEEEEEeeeCCCCCcEEEE-EeCCCe------EEEEeCCce
Q 016224 351 THNE-----EHGVLALCGMPDSEGKPVLLC-SCNDNS------VRFYDLPSV 390 (393)
Q Consensus 351 ~~~~-----~~~v~~~~~~~~~~~~~~l~s-~s~dg~------I~iwd~~s~ 390 (393)
.+.. ...+.++.|+++.. ++++ ...||. +++|+++..
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~---~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYV---FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTE---EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCcccCCCCceeEEEEEEecCce---EEEEEccCCCccCCCCceEEEEeccC
Confidence 3321 23689999988644 5543 444433 899998753
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=6.3e-17 Score=159.22 Aligned_cols=258 Identities=7% Similarity=-0.021 Sum_probs=181.4
Q ss_pred ecceEEeeEecCc--EEEecC-CCeEEEEECCCCcEEEEEecCCc-CCEEEEEecCCCCEEEEEeC---CCcEEEEECCC
Q 016224 109 KTDILCRNWVQGN--CMYGEK-CKFLHSWTVGDGFKLLTQLEGHQ-KVVSGITLPSGSDKLYSGSK---DETVRVWDCAS 181 (393)
Q Consensus 109 ~~~i~c~~~~~~~--~~~g~~-dg~i~vwd~~~~~~~~~~l~~h~-~~I~~i~~s~~~~~l~s~s~---dg~v~iwd~~~ 181 (393)
..+|+++.|++|+ +++++. ||+++||+++++ +.. .+..|. ..|..++|+|| +++++++. +...+||.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-ETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-EEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC-CcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 4589999999873 455555 999999999766 544 455555 68999999999 78888775 45556655432
Q ss_pred ---CeEEEEEecC--CceEEEEeCCC--EEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC--EEEEEeCC----
Q 016224 182 ---GQCAGVINLG--GEVGCMISEGP--WIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQD---- 248 (393)
Q Consensus 182 ---~~~~~~~~~~--~~~~~~~~~~~--~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~d---- 248 (393)
+... .+... .....+.++++ .++++.++.+.+||+.+++...+..+.. .+++|+|| .|++++.+
T Consensus 98 ~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp TSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred cCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 2222 33222 22345566664 3444566667799999988765554444 78888887 77777766
Q ss_pred CcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCC--cEEEeeCCCcceeeEeccCccceEEEE----
Q 016224 249 GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDN--SIRVWNLETLQCIQTLTEHTSVVMSLL---- 320 (393)
Q Consensus 249 g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~l~---- 320 (393)
..|++||+.++. ...+..|...+..++|+ +++|+++..++ .|++||+.+++.. .+..|...+..+.
T Consensus 175 ~~i~~~d~~~g~-----~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 175 VSLFTSNLSSGG-----LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEEEEETTTCC-----CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred eEEEEEcCCCCC-----ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 779999988763 23566777778888886 66888888888 8999999998887 7777776666555
Q ss_pred ----Ec--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCe---EEEEeCCc
Q 016224 321 ----CW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNS---VRFYDLPS 389 (393)
Q Consensus 321 ----~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~---I~iwd~~s 389 (393)
|+ +.++++++.|++++||++ ++... .. ...+..++|+ ++. ++++++.+.. |.+|++.+
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~--~~~v~~~~~s-dg~---~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID--GERVE---AP--QGNHGRVVLW-RGK---LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CC--SSEEEEEEEE-TTE---EEEEEEETTEEEEEEEETTCC
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cC--CCceEEEEec-CCE---EEEEEcCCCCCCeEEEEcCCC
Confidence 77 668889999999999998 33222 11 2347778887 443 7888777744 77777654
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=4.5e-16 Score=142.30 Aligned_cols=247 Identities=10% Similarity=0.033 Sum_probs=164.7
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCc-CCEEEEEecCCCCEEE-EEeCCCcEEEEECCCCeEEEEEecCC-------
Q 016224 122 CMYGEKCKFLHSWTVGDGFKLLTQLEGHQ-KVVSGITLPSGSDKLY-SGSKDETVRVWDCASGQCAGVINLGG------- 192 (393)
Q Consensus 122 ~~~g~~dg~i~vwd~~~~~~~~~~l~~h~-~~I~~i~~s~~~~~l~-s~s~dg~v~iwd~~~~~~~~~~~~~~------- 192 (393)
+++++.++.|++||+.++ +.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++.+..+....
T Consensus 14 ~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~ 92 (349)
T 1jmx_B 14 MIVTNYPNNLHVVDVASD-TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGR 92 (349)
T ss_dssp EEEEETTTEEEEEETTTT-EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEE
T ss_pred EEEeCCCCeEEEEECCCC-cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccc
Confidence 346788999999999998 7777777554 2577899999998665 45568999999999999888777543
Q ss_pred --ceEEEEeCCCEEEEEc-------------CCeEEEEECCCCcee---eecCCCCcEEEEEEeCC-EEEEEeCCCcEEE
Q 016224 193 --EVGCMISEGPWIFIGV-------------TNFVKAWNTQTNTDL---SLSGPVGQVYAMAVGND-LLFAGTQDGAILA 253 (393)
Q Consensus 193 --~~~~~~~~~~~l~~~~-------------~~~i~v~d~~~~~~~---~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~v 253 (393)
....+.+++++++++. ++.|.+||+.+++.. ....+...+.+++|+++ .+++++ +.|.+
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~--~~i~~ 170 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--PDIYK 170 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES--SSEEE
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEcc--CcEEE
Confidence 2344557888888764 489999999885432 33334446888999987 444443 34999
Q ss_pred EEeccCCccccCceeecCce------------------------eeEEEEEEcC-------------CEEEEecCCCcEE
Q 016224 254 WKFNVTTNCFEPAASLKGHS------------------------LAVVSLVVGA-------------NKLYSGSMDNSIR 296 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~------------------------~~v~~l~~~~-------------~~l~sg~~dg~i~ 296 (393)
||+.++.. ...+..+. .....+++.. .++.....++.++
T Consensus 171 ~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (349)
T 1jmx_B 171 MDVKTGKY----TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 246 (349)
T ss_dssp ECTTTCCE----EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE
T ss_pred EeCCCCce----eccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE
Confidence 99877632 22221110 0122233321 0122333344555
Q ss_pred EeeCCCcceeeEeccCccceEEEEEc---CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEE
Q 016224 297 VWNLETLQCIQTLTEHTSVVMSLLCW---DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVL 373 (393)
Q Consensus 297 iwd~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 373 (393)
+|++. .+...+..+.++ +++++++ ++.|.+||+.+++.+..+... ..+..++|+|++. +|
T Consensus 247 ~~~~~---------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~---~l 309 (349)
T 1jmx_B 247 TQEFA---------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD---HTYYCVAFDKKGD---KL 309 (349)
T ss_dssp EEEEE---------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS---SCCCEEEECSSSS---CE
T ss_pred ecccc---------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC---CCccceEECCCCC---EE
Confidence 55442 244456677765 4577777 889999999887665554432 2356788888754 67
Q ss_pred EEEeCCCeEEEEeCCceee
Q 016224 374 LCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 374 ~s~s~dg~I~iwd~~s~~l 392 (393)
++++.++.|++||+.++++
T Consensus 310 ~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 310 YLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp EEESBSSEEEEEETTTTEE
T ss_pred EEecCCCeEEEEeccccce
Confidence 7788899999999998764
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.76 E-value=9.2e-17 Score=162.48 Aligned_cols=231 Identities=8% Similarity=-0.028 Sum_probs=168.7
Q ss_pred cCCEEEEEecCCCCEEEEEeC-CC-----cEEEEECCCCeEEEEEecCC---------------------------ceEE
Q 016224 150 QKVVSGITLPSGSDKLYSGSK-DE-----TVRVWDCASGQCAGVINLGG---------------------------EVGC 196 (393)
Q Consensus 150 ~~~I~~i~~s~~~~~l~s~s~-dg-----~v~iwd~~~~~~~~~~~~~~---------------------------~~~~ 196 (393)
...|.+++|+|||++|++++. |+ .|++||+.+++....+.... ....
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 99999999998877775431 1234
Q ss_pred EEeCCCEEEEEcCCeEEEEECCCC---ceeeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecC
Q 016224 197 MISEGPWIFIGVTNFVKAWNTQTN---TDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKG 271 (393)
Q Consensus 197 ~~~~~~~l~~~~~~~i~v~d~~~~---~~~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~ 271 (393)
+.+++++|+++.++.|.+||+.++ ....+..+...+..++|+|+ .|+.++ ++.|++||+.++.. ......
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~----~~~~~~ 190 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ----MQLTAD 190 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE----EECCCC
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE----EEeccC
Confidence 567999999887899999999998 66677788889999999999 677666 56999999987532 111122
Q ss_pred ceee----------------EEEEEE--cCCEEEEecCCC---------------------------------cEEEeeC
Q 016224 272 HSLA----------------VVSLVV--GANKLYSGSMDN---------------------------------SIRVWNL 300 (393)
Q Consensus 272 ~~~~----------------v~~l~~--~~~~l~sg~~dg---------------------------------~i~iwd~ 300 (393)
+... +..+.| ++++|++++.|+ .|.+||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 2211 244555 467888887665 8899999
Q ss_pred CC-cceeeEec--cCccceEEEEE-cCCEEEEEeC-----CCcEEEEEcCCCcceEEEEeecCCc--cEEEEEeeeCCCC
Q 016224 301 ET-LQCIQTLT--EHTSVVMSLLC-WDQFLLSCSL-----DKTIKVWFATDSGNLEVTYTHNEEH--GVLALCGMPDSEG 369 (393)
Q Consensus 301 ~~-~~~~~~~~--~~~~~v~~l~~-~~~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 369 (393)
.+ ++...... .|...+..+.| ++++|++++. +..|++||+.+++....+..+.... .+..+.|+|++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~- 349 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS- 349 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-
T ss_pred CCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-
Confidence 98 77655443 36677777776 3567776653 5679999998877655544433210 234678887754
Q ss_pred CcEEEEEeCCCeEEEEeCC
Q 016224 370 KPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 370 ~~~l~s~s~dg~I~iwd~~ 388 (393)
++++++.||.++||.+.
T Consensus 350 --~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 350 --ILWSSERTGFQHLYRID 366 (741)
T ss_dssp --EEEEECTTSSCEEEEEC
T ss_pred --EEEEecCCCccEEEEEc
Confidence 89999999988888764
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.76 E-value=1.7e-16 Score=166.44 Aligned_cols=234 Identities=10% Similarity=0.037 Sum_probs=171.8
Q ss_pred EecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC-CeEEEEEecCC--ceEEEEeCCCEEEEEcCCeEEEEECCCCc
Q 016224 145 QLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS-GQCAGVINLGG--EVGCMISEGPWIFIGVTNFVKAWNTQTNT 221 (393)
Q Consensus 145 ~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~i~v~d~~~~~ 221 (393)
.+.+|...+.++.|+++ .++++++.|+++.||.+.. +.....+.... ....+.++++.++.+.++.|.+|++....
T Consensus 198 ~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~ 276 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEK 276 (1045)
T ss_dssp EEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCC
T ss_pred ECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceE
Confidence 34567888889999988 6777888899999998653 33333333222 24566789998888889999999996555
Q ss_pred eeeecC-----------CCCcEEEEEEe-CC--EEEEEeCCCcEEEEEeccCCccccCceeecCcee-eEEEEEEc-CCE
Q 016224 222 DLSLSG-----------PVGQVYAMAVG-ND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSL-AVVSLVVG-ANK 285 (393)
Q Consensus 222 ~~~~~~-----------~~~~v~~l~~~-~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~-~v~~l~~~-~~~ 285 (393)
...+.. +...+..++|+ |+ .|++++ ++.|.+|++..+. ...+..|.. .+..++|+ ++.
T Consensus 277 l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~sdg~~ 350 (1045)
T 1k32_A 277 IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY-----VLKVPEPLRIRYVRRGGDTKVA 350 (1045)
T ss_dssp EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB-----EEECSCCSCEEEEEECSSSEEE
T ss_pred eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc-----eEEccCCCcceEEeeeEcCCCe
Confidence 444333 23468899999 98 666666 8899999987653 223445555 67777776 447
Q ss_pred EEEecCCCcEE-EeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEE
Q 016224 286 LYSGSMDNSIR-VWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALC 362 (393)
Q Consensus 286 l~sg~~dg~i~-iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 362 (393)
|+.++.+..+. +||+.+++.. .+..|...+..++|+ +++|++++.++.|++||+.+++.......+. ..+..++
T Consensus 351 l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~--~~v~~~~ 427 (1045)
T 1k32_A 351 FIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE--AMITDFT 427 (1045)
T ss_dssp EEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--SCCCCEE
T ss_pred EEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC--CCccceE
Confidence 88888888888 9999877654 444787889999998 6799999999999999998776555443433 3467788
Q ss_pred eeeCCCCCcEEEEEeCCC----------eEEEEeCCcee
Q 016224 363 GMPDSEGKPVLLCSCNDN----------SVRFYDLPSVI 391 (393)
Q Consensus 363 ~~~~~~~~~~l~s~s~dg----------~I~iwd~~s~~ 391 (393)
|+|++. +|++++.++ .|++||+.+++
T Consensus 428 ~SpDG~---~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 428 ISDNSR---FIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp ECTTSC---EEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ECCCCC---eEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 988765 788777654 89999998765
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=1.6e-15 Score=138.99 Aligned_cols=232 Identities=13% Similarity=0.155 Sum_probs=156.1
Q ss_pred cceEEeeEecCc-EEEecC---CCeEEEEECCCCc-EEEEEecCCcCCEEEEEecCCCCEEEEEe-CCCcEEEEECC-CC
Q 016224 110 TDILCRNWVQGN-CMYGEK---CKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVRVWDCA-SG 182 (393)
Q Consensus 110 ~~i~c~~~~~~~-~~~g~~---dg~i~vwd~~~~~-~~~~~l~~h~~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~-~~ 182 (393)
.....++|++++ +++++. ++.|++|++.++. +.+..+..+...+..++|+|++++|++++ .++.|.+|++. ++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC
Confidence 355678898876 444433 6899999997662 34555566788899999999999999888 67999999996 33
Q ss_pred --eEEEEEecCC----------ce--EEEEeCCCEEEEE-cCCeEEEEECC-CCceee---ec-CCCCcEEEEEEeCC--
Q 016224 183 --QCAGVINLGG----------EV--GCMISEGPWIFIG-VTNFVKAWNTQ-TNTDLS---LS-GPVGQVYAMAVGND-- 240 (393)
Q Consensus 183 --~~~~~~~~~~----------~~--~~~~~~~~~l~~~-~~~~i~v~d~~-~~~~~~---~~-~~~~~v~~l~~~~~-- 240 (393)
+.+..+.... .+ ..+.++++++++. .++.|.+|++. +++... .. .....+..++|+|+
T Consensus 120 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~ 199 (347)
T 3hfq_A 120 ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQ 199 (347)
T ss_dssp CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred CeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCC
Confidence 3333333221 12 3445688855555 46799999998 454331 12 23346788999998
Q ss_pred EE-EEEeCCCcEEEEEeccCCccccCceeecCce------eeEEEEEEc--CCEE-EEecCCCcEEEeeCC---Ccceee
Q 016224 241 LL-FAGTQDGAILAWKFNVTTNCFEPAASLKGHS------LAVVSLVVG--ANKL-YSGSMDNSIRVWNLE---TLQCIQ 307 (393)
Q Consensus 241 ~l-~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~------~~v~~l~~~--~~~l-~sg~~dg~i~iwd~~---~~~~~~ 307 (393)
++ ++...++.|.+|++............+.... ..+..++++ +++| ++...++.|.+||+. +.+.+.
T Consensus 200 ~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 200 YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQ 279 (347)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeE
Confidence 44 4456789999999986322222222222211 346667765 5666 556678999999997 335566
Q ss_pred EeccCccceEEEEEc--CCEEEEEeC-CCcEEEEEcC
Q 016224 308 TLTEHTSVVMSLLCW--DQFLLSCSL-DKTIKVWFAT 341 (393)
Q Consensus 308 ~~~~~~~~v~~l~~~--~~~l~s~s~-dg~i~iwd~~ 341 (393)
.+..+...+..++|+ +++|++++. ++.|.+|++.
T Consensus 280 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 280 QISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 666666677888888 677877776 4899999554
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=3.5e-17 Score=165.04 Aligned_cols=268 Identities=12% Similarity=0.114 Sum_probs=178.7
Q ss_pred EeeEecCc-EEEecCCCeEEEEECCCCcEEEEEecCCcC---CEEEEEecCCCCEEEEEeC---------CCcEEEEECC
Q 016224 114 CRNWVQGN-CMYGEKCKFLHSWTVGDGFKLLTQLEGHQK---VVSGITLPSGSDKLYSGSK---------DETVRVWDCA 180 (393)
Q Consensus 114 c~~~~~~~-~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~---~I~~i~~s~~~~~l~s~s~---------dg~v~iwd~~ 180 (393)
...|++++ ++..+.|+.|++||+.++ +....+.+|.. .|.+++|||||++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETG-QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSC-CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCC-cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 56788775 445667999999999998 66666665544 4899999999999999876 7899999999
Q ss_pred CCeEE--EEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeec--CCCCcE-----------------EEEEEeC
Q 016224 181 SGQCA--GVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLS--GPVGQV-----------------YAMAVGN 239 (393)
Q Consensus 181 ~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~--~~~~~v-----------------~~l~~~~ 239 (393)
+++.+ ..+........+.++|+.|+.+.++.|++|++.+++...+. ++...| .++.|+|
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 98873 22222223356678999999888999999999988766432 333323 4899999
Q ss_pred C--EEEEEeCCC----------------------------------cEEEEEeccCCcc----ccCceeecCceeeEEEE
Q 016224 240 D--LLFAGTQDG----------------------------------AILAWKFNVTTNC----FEPAASLKGHSLAVVSL 279 (393)
Q Consensus 240 ~--~l~~~~~dg----------------------------------~I~vwd~~~~~~~----~~~~~~~~~~~~~v~~l 279 (393)
| .|++++.|. .|++||+.++... ......+.+|...+..+
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWL 258 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEE
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEe
Confidence 8 777776542 7889998875320 00002244678888888
Q ss_pred EEcCC--EEEEecCC----CcEEEee----CCCcceeeEe----ccCccceE-----EEEEc--CCEEE--EEeCCC--c
Q 016224 280 VVGAN--KLYSGSMD----NSIRVWN----LETLQCIQTL----TEHTSVVM-----SLLCW--DQFLL--SCSLDK--T 334 (393)
Q Consensus 280 ~~~~~--~l~sg~~d----g~i~iwd----~~~~~~~~~~----~~~~~~v~-----~l~~~--~~~l~--s~s~dg--~ 334 (393)
+|+++ ++++.... ..|.+|| +.++++...+ ..|...+. .+.|+ ++.|+ +...++ .
T Consensus 259 ~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~ 338 (719)
T 1z68_A 259 TWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKH 338 (719)
T ss_dssp EESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEE
T ss_pred EEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceE
Confidence 88744 45553322 3488999 8888776665 35666665 67777 55433 454566 4
Q ss_pred EEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC----CCeEEEEeCC
Q 016224 335 IKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN----DNSVRFYDLP 388 (393)
Q Consensus 335 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~----dg~I~iwd~~ 388 (393)
|.+||+..++ ...+..+ ...+..+.+. + ++.+++++.. ++.+++|.+.
T Consensus 339 l~~~~~~~~~-~~~lt~~--~~~v~~~~~~-d--~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 339 IHYIKDTVEN-AIQITSG--KWEAINIFRV-T--QDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EEEESSCSTT-CEECSCS--SSCEEEEEEE-C--SSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEEEECCCCc-eEecccC--ceEEEEEEEE-e--CCEEEEEEecCCCCCceEEEEEEe
Confidence 6666765544 3333322 2235666665 3 3334555544 4888999875
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=2.8e-16 Score=142.89 Aligned_cols=232 Identities=10% Similarity=0.051 Sum_probs=164.1
Q ss_pred eEEeeEecCc--E-EEecCCCeEEEEECCCCcEEEEEecC-C----cCCEEEEEecCCCCEEEEEe------------CC
Q 016224 112 ILCRNWVQGN--C-MYGEKCKFLHSWTVGDGFKLLTQLEG-H----QKVVSGITLPSGSDKLYSGS------------KD 171 (393)
Q Consensus 112 i~c~~~~~~~--~-~~g~~dg~i~vwd~~~~~~~~~~l~~-h----~~~I~~i~~s~~~~~l~s~s------------~d 171 (393)
+.++.|++++ + +++..++.|.+||+.++ +.+..+.. + ...+..++|+|++++|++++ .+
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTG-ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTC-CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCC-CeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 5678888774 3 34667889999999988 66665553 2 23577899999999999886 67
Q ss_pred CcEEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEEcCCeEEEEECCCCceee-ecCCCCcEEEEEEeCC--EEEEEe
Q 016224 172 ETVRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIGVTNFVKAWNTQTNTDLS-LSGPVGQVYAMAVGND--LLFAGT 246 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~-~~~~~~~v~~l~~~~~--~l~~~~ 246 (393)
+.|.+||+.+++.+..+.....+ ..+.+++++++++ ++.|.+||+.+++... +..+. ....+.|+++ .+++.+
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVMDPEAGTLVEDKPIQS-WEAETYAQPDVLAVWNQH 192 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEEETTTTEEEEEECSTT-TTTTTBCCCBCCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEEECCCCcEeeeeeccc-cCCCceeCCCccEEeeec
Confidence 99999999999988888765443 3455688877777 7899999999988763 22222 0012245555 333322
Q ss_pred -CCC-----------------------cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeC
Q 016224 247 -QDG-----------------------AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNL 300 (393)
Q Consensus 247 -~dg-----------------------~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~ 300 (393)
.++ .|.+||+.+... . ...+..+...+..++++ +++++++ ++.|.+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM--A-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDL 267 (337)
T ss_dssp TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE--E-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred cCCCceeeeeeccccccccccccccccceEEEeCCCCCc--e-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence 222 468899887642 1 22333444556667775 5677777 799999999
Q ss_pred CCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEee
Q 016224 301 ETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTH 352 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 352 (393)
.+++.+..+..+ ..+.+++|+ +++|++++.++.|.+||+.+++.+..+...
T Consensus 268 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 268 EKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 999988887644 356778887 678888889999999999888776666544
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1.3e-15 Score=135.50 Aligned_cols=216 Identities=10% Similarity=0.099 Sum_probs=152.5
Q ss_pred EEeCCCcEEEEECCCCeEEEEEecCCceEE--EEeCCCEEEEEcCCeEEEEECCC-Cceeeec-CC-CCcEEEEEEeCC-
Q 016224 167 SGSKDETVRVWDCASGQCAGVINLGGEVGC--MISEGPWIFIGVTNFVKAWNTQT-NTDLSLS-GP-VGQVYAMAVGND- 240 (393)
Q Consensus 167 s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~i~v~d~~~-~~~~~~~-~~-~~~v~~l~~~~~- 240 (393)
+++.|++|++||+.+++......+...+.. +.+++++++++.++.|.+||+.+ ++...+. .+ ...+.+++|+|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 346789999999999988877766655544 44789999999899999999998 7766443 33 367889999998
Q ss_pred -EEEEEe--CCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEE-EecCCCcEEEeeCCC-cceeeEeccCc
Q 016224 241 -LLFAGT--QDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLY-SGSMDNSIRVWNLET-LQCIQTLTEHT 313 (393)
Q Consensus 241 -~l~~~~--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~-~~~~~~~~~~~ 313 (393)
+|++++ .++.+.+|.+..... . ...+..+. .+..+.|+ +++|+ ++..++.++||++.. ......+..+.
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~--~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGG--T-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCC--C-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCC--c-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 777777 445666666654322 1 22333222 36666775 55665 788899999998632 33446667788
Q ss_pred cceEEEEEc--CCEEEEEe-CCCcEEEEEcC-CCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCC----------
Q 016224 314 SVVMSLLCW--DQFLLSCS-LDKTIKVWFAT-DSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCND---------- 379 (393)
Q Consensus 314 ~~v~~l~~~--~~~l~s~s-~dg~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~d---------- 379 (393)
..+.++.|+ +++|+.++ .++.++||++. .......+..+. ..+..+.|+|++. +|++++.+
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~---~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA--YGDWFPHPSPSGD---KVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS--EEEEEEEECTTSS---EEEEEEEETTCCSCCSSE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC--cccCCeEECCCCC---EEEEEEcCCCCCcccccC
Confidence 889999998 56676655 58999999986 444444443333 3577888888765 78777765
Q ss_pred -CeEEEEeCCcee
Q 016224 380 -NSVRFYDLPSVI 391 (393)
Q Consensus 380 -g~I~iwd~~s~~ 391 (393)
+.|++||+.+++
T Consensus 248 ~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 248 DVRVQLMDMDGGN 260 (297)
T ss_dssp EEEEEEEETTSCS
T ss_pred ceEEEEEecCCCC
Confidence 569999998764
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.70 E-value=9.5e-16 Score=150.78 Aligned_cols=224 Identities=8% Similarity=-0.042 Sum_probs=150.7
Q ss_pred cCCEEEEEecCCCCEEEEEeC-CCcEEEEECCCCeEEEEEecCC-ceEEEE--eCCCEEEEEc----CCeEEEE--EC--
Q 016224 150 QKVVSGITLPSGSDKLYSGSK-DETVRVWDCASGQCAGVINLGG-EVGCMI--SEGPWIFIGV----TNFVKAW--NT-- 217 (393)
Q Consensus 150 ~~~I~~i~~s~~~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~-~~~~~~--~~~~~l~~~~----~~~i~v~--d~-- 217 (393)
..+|.+++|+|||++||+++. ||+++||++.+++..+...... .+.... ++ ++++++. +....+| +.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 568999999999999999887 9999999997777655444442 333322 34 6666553 2445554 44
Q ss_pred CCCceeeecCC-CCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCC---
Q 016224 218 QTNTDLSLSGP-VGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMD--- 292 (393)
Q Consensus 218 ~~~~~~~~~~~-~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d--- 292 (393)
..... .+... ...+.++.++++ .+++...++.+.+||+.++.. .... .+...-..++++|++|++++.+
T Consensus 100 ~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~----~~l~-~~~~~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 100 PGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL----RELA-RLPGFGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE----EEEE-EESSCEEEEEEETTEEEEEEEEETT
T ss_pred CCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE----EEee-cCCCceEEECCCCCEEEEEEEcCCC
Confidence 33333 33222 222444444554 455555555666999987632 2222 2222344566789999988777
Q ss_pred -CcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCC--cEEEEEcCCCcceEEEEeecCCccEEEEE-----
Q 016224 293 -NSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDK--TIKVWFATDSGNLEVTYTHNEEHGVLALC----- 362 (393)
Q Consensus 293 -g~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~----- 362 (393)
..|++||+.+++.. .+..|...+..++|+ +++|+++..++ .|++||+.+++.. .+..+.. .+..+.
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~--~~~~~~~~~~~ 249 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK--DFSSYRPTAIT 249 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS--HHHHHCCSEEE
T ss_pred CeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc--Chhhhhhcccc
Confidence 78999999988754 677888889999998 67888888888 8999999876654 3333222 233334
Q ss_pred ---eeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 363 ---GMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 363 ---~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
|+|++ .++++++.|+.+++|++
T Consensus 250 ~~~~spdg---~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 250 WLGYLPDG---RLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTTS---CEEEEEEETTEEEEEET
T ss_pred ceeEcCCC---cEEEEEEcCCcEEEEEE
Confidence 77775 48999999999999998
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=1.4e-14 Score=131.60 Aligned_cols=225 Identities=9% Similarity=0.101 Sum_probs=149.3
Q ss_pred EecCCCCE-EEEEeCCCcEEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEE--cCCeEEEEECCCCce-e-eecCCC
Q 016224 157 TLPSGSDK-LYSGSKDETVRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIG--VTNFVKAWNTQTNTD-L-SLSGPV 229 (393)
Q Consensus 157 ~~s~~~~~-l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~i~v~d~~~~~~-~-~~~~~~ 229 (393)
.|.+++++ +++.+.++.|.+||+.+++.+..+..+... ..+.+++++++++ .++.|.+||..+++. . .+..+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 45555555 677788999999999999988887754332 2233678866654 367999999999886 4 444455
Q ss_pred CcEEEEEEeCC--EEEEEeCCC---cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCE-EEEecCCCc-EEEeeC
Q 016224 230 GQVYAMAVGND--LLFAGTQDG---AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANK-LYSGSMDNS-IRVWNL 300 (393)
Q Consensus 230 ~~v~~l~~~~~--~l~~~~~dg---~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~-l~sg~~dg~-i~iwd~ 300 (393)
....+++|+|+ +++++..++ .|.+||+.+.. ....+..+ .....++++ +++ +++...++. |.+|++
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~----~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK----FISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE----EEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCccceEECCCCCEEEEecCCCCcccEEEEECCCCC----eEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 55545999988 666555553 89999998763 33333322 234667775 444 455566688 999998
Q ss_pred CCcceee----EeccCccceEEEEEc--CCEE-EEEeCCCcEEEEEcCCCcc---eEEEEeecCCccEEEEEeeeCCCCC
Q 016224 301 ETLQCIQ----TLTEHTSVVMSLLCW--DQFL-LSCSLDKTIKVWFATDSGN---LEVTYTHNEEHGVLALCGMPDSEGK 370 (393)
Q Consensus 301 ~~~~~~~----~~~~~~~~v~~l~~~--~~~l-~s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~ 370 (393)
.....+. ...........+.++ ++++ +++..++.|.+||+.+++. +..+.. ...+..++|+|++.
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~---~~~~~~~~~spdg~-- 233 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT---NNLPGTIVVSRDGS-- 233 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC---SSCCCCEEECTTSS--
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC---CCCCceEEECCCCC--
Confidence 7533321 111234456788887 5655 4555689999999988776 444432 34466788887654
Q ss_pred cEEEEE-eCCCeEEEEeCCceee
Q 016224 371 PVLLCS-CNDNSVRFYDLPSVII 392 (393)
Q Consensus 371 ~~l~s~-s~dg~I~iwd~~s~~l 392 (393)
+|+.+ ..++.|.+||+.++++
T Consensus 234 -~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 234 -TVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp -EEEEECSSEEEEEEEETTTTEE
T ss_pred -EEEEEEcCCCEEEEEECCCCce
Confidence 56555 4578899999998765
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=2.6e-14 Score=131.91 Aligned_cols=252 Identities=11% Similarity=0.104 Sum_probs=169.8
Q ss_pred CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeC----------CCcEEEEECCCCeEEEEEecC-----
Q 016224 127 KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSK----------DETVRVWDCASGQCAGVINLG----- 191 (393)
Q Consensus 127 ~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~----------dg~v~iwd~~~~~~~~~~~~~----- 191 (393)
.|+.|++||..++ +.+.++..+..+ .++|+||+++|+++.. +++|.+||..+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~-~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 29 TESRVHVYDYTNG-KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GGCEEEEEETTTC-CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred ccCeEEEEECCCC-eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 4789999999988 778888877666 8999999999999863 678999999999998888753
Q ss_pred ----CceEEEEeCCCEEEEEc---CCeEEEEECCCCceeee-cCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEeccCC
Q 016224 192 ----GEVGCMISEGPWIFIGV---TNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTT 260 (393)
Q Consensus 192 ----~~~~~~~~~~~~l~~~~---~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~~~ 260 (393)
.....+.+++++|+++. ++.|.+||+.+++.+.. ...... ..+.+.|+ .+++.+.||.+.+|++....
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 12345667999998863 57999999999987744 333322 22445553 78888999999999986532
Q ss_pred ccccCc---eeecCceeeE-EEEEEcCCEEEEecCCCcEEEeeCCCcce--eeEeccCc----------cceEEEEEc--
Q 016224 261 NCFEPA---ASLKGHSLAV-VSLVVGANKLYSGSMDNSIRVWNLETLQC--IQTLTEHT----------SVVMSLLCW-- 322 (393)
Q Consensus 261 ~~~~~~---~~~~~~~~~v-~~l~~~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~----------~~v~~l~~~-- 322 (393)
...... ..+.....++ .....++..++..+.++.|.++|+..... +..+.... .....++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 110000 0111111111 11234466666677889999999875432 22221100 000113444
Q ss_pred CCEEEEEeC-----------CCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 323 DQFLLSCSL-----------DKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 323 ~~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
++.++++.. .+.|.+||+.+.+.+..+..+. ...++++|++. +|++++. +.|.+||+.++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~---~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRN---LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTT---EEEEECS-SCEEEEECSSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCC---EEEEeCC-CeEEEEECCCC
Confidence 566655432 3489999999887776665543 77888888765 7888876 99999999998
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=1.3e-14 Score=134.23 Aligned_cols=255 Identities=10% Similarity=0.112 Sum_probs=159.4
Q ss_pred CeEEEEEC--CCCcEE--EEEec-CCcCCEEEEEecCCCCEEEEEeCCCcEEEEECC-CCeEEEEEec--CCce--EEEE
Q 016224 129 KFLHSWTV--GDGFKL--LTQLE-GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA-SGQCAGVINL--GGEV--GCMI 198 (393)
Q Consensus 129 g~i~vwd~--~~~~~~--~~~l~-~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~-~~~~~~~~~~--~~~~--~~~~ 198 (393)
+.|.+|++ .++ ++ +.... .+...+..++|+|++++|++++.+ .|.+|++. +++....... .... ..+.
T Consensus 14 ~~i~~~~~d~~~g-~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~s 91 (365)
T 1jof_A 14 GAIFTVQFDDEKL-TCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDAD 91 (365)
T ss_dssp CEEEEEEEETTTT-EEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTT
T ss_pred CcEEEEEEECCCC-CEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEEC
Confidence 56777765 455 33 22221 244568889999999999999988 99999997 7876544332 1211 2234
Q ss_pred eCCCE--EEEE--------------cCCeEEEEECCC-Ccee-eec----CCCCcEEEEEEeCC--EEEEEe-CCCcEEE
Q 016224 199 SEGPW--IFIG--------------VTNFVKAWNTQT-NTDL-SLS----GPVGQVYAMAVGND--LLFAGT-QDGAILA 253 (393)
Q Consensus 199 ~~~~~--l~~~--------------~~~~i~v~d~~~-~~~~-~~~----~~~~~v~~l~~~~~--~l~~~~-~dg~I~v 253 (393)
++++. ++++ .++.+.+|++.. ++.. .+. .+...+.+++|+|+ +|+++. .++.|.+
T Consensus 92 pdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~ 171 (365)
T 1jof_A 92 TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT 171 (365)
T ss_dssp SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEE
Confidence 57774 3333 477999999974 5443 222 24567999999998 666655 4689999
Q ss_pred EEec-cCCccccCceeec--CceeeEEEEEEc--CCEEEEec-CCCcEEEeeCC--Cccee---eE---ecc----Ccc-
Q 016224 254 WKFN-VTTNCFEPAASLK--GHSLAVVSLVVG--ANKLYSGS-MDNSIRVWNLE--TLQCI---QT---LTE----HTS- 314 (393)
Q Consensus 254 wd~~-~~~~~~~~~~~~~--~~~~~v~~l~~~--~~~l~sg~-~dg~i~iwd~~--~~~~~---~~---~~~----~~~- 314 (393)
||+. ++.. .....+. .|...+..++++ ++++++++ .++.|.+|++. +++.. .. +.. |..
T Consensus 172 ~~~~~~g~~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 249 (365)
T 1jof_A 172 HRKLASGEV--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE 249 (365)
T ss_dssp EEECTTSCE--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred EEECCCCCE--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccc
Confidence 9998 4421 2222222 234456667775 56777666 47899999765 55542 12 221 222
Q ss_pred -----ceEEEE-Ec--CCEEEEEeCC-C-----cEEEEEcCCCcceEEEE--eecCCccEEEEEeee---CCCCCcEEEE
Q 016224 315 -----VVMSLL-CW--DQFLLSCSLD-K-----TIKVWFATDSGNLEVTY--THNEEHGVLALCGMP---DSEGKPVLLC 375 (393)
Q Consensus 315 -----~v~~l~-~~--~~~l~s~s~d-g-----~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~---~~~~~~~l~s 375 (393)
.+..++ ++ +++|+++..+ . .|.+|++.....+..+. ..........++++| ++. +|++
T Consensus 250 ~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~---~l~v 326 (365)
T 1jof_A 250 TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE---WMAI 326 (365)
T ss_dssp TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT---EEEE
T ss_pred cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC---EEEE
Confidence 477888 87 6677766543 2 89999996333333211 111122344677788 554 7888
Q ss_pred EeC-CCeEEEEeCCce
Q 016224 376 SCN-DNSVRFYDLPSV 390 (393)
Q Consensus 376 ~s~-dg~I~iwd~~s~ 390 (393)
++. ++.|.+|++...
T Consensus 327 ~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 327 TDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECSSSCEEEEEEEETT
T ss_pred EEcCCCeEEEEEEchh
Confidence 876 489999998643
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.67 E-value=2.3e-14 Score=133.16 Aligned_cols=263 Identities=12% Similarity=-0.006 Sum_probs=168.8
Q ss_pred eeEecCc--EEEecC-CC--eEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 115 RNWVQGN--CMYGEK-CK--FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 115 ~~~~~~~--~~~g~~-dg--~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
..|++++ +++.+. ++ .|.+||+.++ +......+|...+..++|+||++.|+.++.++.|.+||+.+++....+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ-VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTC-EEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCC-ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 5788774 445554 66 5888999888 6666666676666677899999999999999999999999998877776
Q ss_pred cCCceE---E--EEeCCCEEEEE-----------------------cCCeEEEEECCCCceeeecCCCCcEEEEEEeC-C
Q 016224 190 LGGEVG---C--MISEGPWIFIG-----------------------VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGN-D 240 (393)
Q Consensus 190 ~~~~~~---~--~~~~~~~l~~~-----------------------~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~-~ 240 (393)
.+.... . ..+++.+++.. .+..|.+||+.+++...+..+...+..+.|+| +
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~d 199 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYD 199 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCC
Confidence 655432 1 23577777642 23579999999998877777778899999999 7
Q ss_pred --EEEEEeCC------CcEEEEEeccCCccccCceeecCce--eeEEEEEEc--CCEEEEec-CCC----cEEEeeCCCc
Q 016224 241 --LLFAGTQD------GAILAWKFNVTTNCFEPAASLKGHS--LAVVSLVVG--ANKLYSGS-MDN----SIRVWNLETL 303 (393)
Q Consensus 241 --~l~~~~~d------g~I~vwd~~~~~~~~~~~~~~~~~~--~~v~~l~~~--~~~l~sg~-~dg----~i~iwd~~~~ 303 (393)
.|+....+ ..|.++|+.... ...+..+. ..+....|+ ++.|+..+ .++ .|++||+.++
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 200 DSTVAFCHEGPHDLVDARMWLINEDGTN-----MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp EEEEEEEECSCTTTSSCSEEEEETTSCC-----CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred CCEEEEEEecCCCCCcceEEEEeCCCCc-----eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 56555543 367777766542 12222232 345566665 55554433 222 3999999988
Q ss_pred ce--eeEeccCccce-----EEEEEcCCEEEEE---------eCCCcEEEEEcCCCcceEEEEeecCC---------ccE
Q 016224 304 QC--IQTLTEHTSVV-----MSLLCWDQFLLSC---------SLDKTIKVWFATDSGNLEVTYTHNEE---------HGV 358 (393)
Q Consensus 304 ~~--~~~~~~~~~~v-----~~l~~~~~~l~s~---------s~dg~i~iwd~~~~~~~~~~~~~~~~---------~~v 358 (393)
+. +..+..+.... ..+..+++.|+.. ..+..|++||+.+++. ..+..+... ..+
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~ 353 (388)
T 3pe7_A 275 ENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTH 353 (388)
T ss_dssp CEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTC
T ss_pred ceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCC
Confidence 74 33333311110 1234446655543 4567899999976543 444433320 025
Q ss_pred EEEEeeeCCCCCcEEE-EEeCCCeEEEEeC
Q 016224 359 LALCGMPDSEGKPVLL-CSCNDNSVRFYDL 387 (393)
Q Consensus 359 ~~~~~~~~~~~~~~l~-s~s~dg~I~iwd~ 387 (393)
..++|+|++. .|+ ++..+|...||.+
T Consensus 354 ~~~~~spDg~---~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 354 PHPSFTPDDK---QILFTSDVHGKPALYLA 380 (388)
T ss_dssp CCCEECTTSS---EEEEEECTTSSCEEEEE
T ss_pred CCccCCCCCC---EEEEEecCCCceeEEEE
Confidence 6678887754 455 4555776666654
No 160
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.66 E-value=1.6e-15 Score=152.87 Aligned_cols=226 Identities=9% Similarity=0.016 Sum_probs=156.2
Q ss_pred CEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc------eEEEEeCCCEEEEEcC----------CeEEEE
Q 016224 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE------VGCMISEGPWIFIGVT----------NFVKAW 215 (393)
Q Consensus 152 ~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~----------~~i~v~ 215 (393)
.+.+++|+|||+++++ +.||+|++||+.+++....+..+.. ...+.+++++|+.+.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4677899999998876 7899999999999988877765432 2455679998887643 689999
Q ss_pred ECCCCceeeec---CCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCcee----------------
Q 016224 216 NTQTNTDLSLS---GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSL---------------- 274 (393)
Q Consensus 216 d~~~~~~~~~~---~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~---------------- 274 (393)
|+.+++...+. .+...+..++|+|+ .|+.++. +.|++||+.++. .......+..
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~----~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQ----AIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSC----CEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCc----eEEEecCCCCCceECcccceeEEEEe
Confidence 99998764443 34445888999998 7777665 799999988763 2222222221
Q ss_pred --eEEEEEEc--CCEEEEecCCC----------------------------------cEEEeeCCCcceeeEeccC----
Q 016224 275 --AVVSLVVG--ANKLYSGSMDN----------------------------------SIRVWNLETLQCIQTLTEH---- 312 (393)
Q Consensus 275 --~v~~l~~~--~~~l~sg~~dg----------------------------------~i~iwd~~~~~~~~~~~~~---- 312 (393)
.+.+++|+ +++|++++.|+ .|++||+.+++....+..+
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 12456664 66888876543 7999999998876666654
Q ss_pred --ccceEEEEEc--CCEEEEEeC----CCcEEEEEcCCCcceEEEEeecCCccE----EEEEeeeCCCCCcEEEE-EeCC
Q 016224 313 --TSVVMSLLCW--DQFLLSCSL----DKTIKVWFATDSGNLEVTYTHNEEHGV----LALCGMPDSEGKPVLLC-SCND 379 (393)
Q Consensus 313 --~~~v~~l~~~--~~~l~s~s~----dg~i~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~~l~s-~s~d 379 (393)
...+..+.|+ +++|++.+. +..|++||+.+++....+..+.. ..+ ..+.|+|++. .+++. +..+
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~spdg~--~l~~~~~~~~ 328 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-AWLHRQNEEPVFSKDGR--KFFFIRAIPQ 328 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS-SCCCCCCCCCEECTTSC--SEEEEEEECC
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC-CEEeccCCCceEcCCCC--eEEEEEeccc
Confidence 6678899998 556766543 35799999987765544433221 112 2678888754 23333 5567
Q ss_pred C------eEEEEe
Q 016224 380 N------SVRFYD 386 (393)
Q Consensus 380 g------~I~iwd 386 (393)
+ .|.+||
T Consensus 329 ~~~~~~~~l~~~d 341 (723)
T 1xfd_A 329 GGRGKFYHITVSS 341 (723)
T ss_dssp SSSSCEEEEEEEC
T ss_pred CCCcceeEEEEEe
Confidence 7 577777
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=7.1e-13 Score=117.90 Aligned_cols=231 Identities=13% Similarity=0.194 Sum_probs=158.3
Q ss_pred cCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC-------CceEEE-E--eCCCEEEEEc--CCeEEE
Q 016224 147 EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG-------GEVGCM-I--SEGPWIFIGV--TNFVKA 214 (393)
Q Consensus 147 ~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-------~~~~~~-~--~~~~~l~~~~--~~~i~v 214 (393)
.+|-..+.+|+++++++++++...++.|.+||.. ++.+..+... ..+..+ . .++.++++.. ++.|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3466789999999999988888889999999987 6666666431 122222 2 3555666653 789999
Q ss_pred EECCCCcee-eec-CCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeec--CceeeEEEEEEc--CCEE
Q 016224 215 WNTQTNTDL-SLS-GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK--GHSLAVVSLVVG--ANKL 286 (393)
Q Consensus 215 ~d~~~~~~~-~~~-~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~--~~~~~v~~l~~~--~~~l 286 (393)
|+. +++.+ .+. .+...+..++++++ ++++...++.|.+||.... ....+. .+...+..++++ ++++
T Consensus 105 ~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-----~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 105 YNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-----VLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp ECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-----EEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred ECC-CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-----EEEEeCCCCccCCcEEEEECCCCCEE
Confidence 994 45544 332 34467899999887 6666667889999986432 222221 334456778876 4466
Q ss_pred EEecCCCcEEEeeCCCcceeeEeccC--ccceEEEEEc--CCEEEEEeCCC-cEEEEEcCCCcceEEEEeecCCccEEEE
Q 016224 287 YSGSMDNSIRVWNLETLQCIQTLTEH--TSVVMSLLCW--DQFLLSCSLDK-TIKVWFATDSGNLEVTYTHNEEHGVLAL 361 (393)
Q Consensus 287 ~sg~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~l~~~--~~~l~s~s~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 361 (393)
++...++.|++||.. ++.+..+..+ ......++++ ++++++...++ .|.+||. +++.+..+..+........+
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeE
Confidence 666778999999974 5666666543 3567888887 56777777775 9999996 45555555544333446788
Q ss_pred EeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 362 CGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 362 ~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
++.|++. ++++ +.|+.|++|++...
T Consensus 257 ~~~~~g~---l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 257 ALMDDGS---VVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEETTTE---EEEE-ETTTEEEEEECSCC
T ss_pred EECCCCc---EEEE-CCCCeEEEEEcccc
Confidence 8877543 6666 67999999998653
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.62 E-value=3.8e-13 Score=123.89 Aligned_cols=252 Identities=10% Similarity=0.132 Sum_probs=157.7
Q ss_pred eecceEEeeEecCc--EEEecCC----CeEEEEECCC--C-cEEEEEecCCcCCEEEEEecCCCCEEEEEe-CCCcEEEE
Q 016224 108 IKTDILCRNWVQGN--CMYGEKC----KFLHSWTVGD--G-FKLLTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVRVW 177 (393)
Q Consensus 108 ~~~~i~c~~~~~~~--~~~g~~d----g~i~vwd~~~--~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s-~dg~v~iw 177 (393)
+......++|++++ +++++.+ +.|.+|++.. + .+.+.....+......+++ ++++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 34456778898874 4455554 7999998764 4 2344555556677888888 788887776 57899999
Q ss_pred ECCCCeEEE----EEecCC-------------ceEEEEeCCCEEEEE--cCCeEEEEECCCCce--------------ee
Q 016224 178 DCASGQCAG----VINLGG-------------EVGCMISEGPWIFIG--VTNFVKAWNTQTNTD--------------LS 224 (393)
Q Consensus 178 d~~~~~~~~----~~~~~~-------------~~~~~~~~~~~l~~~--~~~~i~v~d~~~~~~--------------~~ 224 (393)
++.....+. .+.... ....+.+++++++++ .++.|.+|++..... ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 997543221 111111 124455788866655 467999998875431 12
Q ss_pred ecCCCCcEEEEEEeCC--EEEEEe-CCCcEEEEEeccCCccccCceee---cCceeeEEEEEEc--CCEEEEecC--CCc
Q 016224 225 LSGPVGQVYAMAVGND--LLFAGT-QDGAILAWKFNVTTNCFEPAASL---KGHSLAVVSLVVG--ANKLYSGSM--DNS 294 (393)
Q Consensus 225 ~~~~~~~v~~l~~~~~--~l~~~~-~dg~I~vwd~~~~~~~~~~~~~~---~~~~~~v~~l~~~--~~~l~sg~~--dg~ 294 (393)
.......+..++|+|+ ++++++ .++.|.+|++..+.. .....+ ..+......++++ +++|+++.. ++.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~--~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML--DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE--EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce--EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 3344566889999998 566666 689999999985432 112222 2233344566664 667766555 589
Q ss_pred EEEeeCC--Ccc--eeeEeccCccceEEEEEc--CCEEEEEe-CCCcEEEEEcCC-CcceEEEEeecCCccEEEEEee
Q 016224 295 IRVWNLE--TLQ--CIQTLTEHTSVVMSLLCW--DQFLLSCS-LDKTIKVWFATD-SGNLEVTYTHNEEHGVLALCGM 364 (393)
Q Consensus 295 i~iwd~~--~~~--~~~~~~~~~~~v~~l~~~--~~~l~s~s-~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~ 364 (393)
|.+|++. +++ .+..+.. ...+..++|+ +++|++++ .++.|.+|++.. ...+..+........+.++.|.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9999985 444 4445544 4466788888 67788777 678999976642 2223322211122346666654
No 163
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=1.2e-12 Score=119.59 Aligned_cols=235 Identities=6% Similarity=0.030 Sum_probs=157.9
Q ss_pred CCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCC---C--cEEEEECCCCeEEEEEecCCceEE--EEeC
Q 016224 128 CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD---E--TVRVWDCASGQCAGVINLGGEVGC--MISE 200 (393)
Q Consensus 128 dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d---g--~v~iwd~~~~~~~~~~~~~~~~~~--~~~~ 200 (393)
++.|.+||+.++ +.. .+ ..+..++|+|||++|+.++.+ + .|.+|++.+++......... +.. +.++
T Consensus 42 ~~~l~~~d~~~~-~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspd 114 (347)
T 2gop_A 42 ENTIVIENLKNN-ARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNED 114 (347)
T ss_dssp EEEEEEEETTTC-CEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTT
T ss_pred cceEEEEeCCCC-ceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCC
Confidence 668999999887 332 33 568889999999999988754 2 48888998888766665544 333 3358
Q ss_pred CCEEEEEc-C---------------------------CeEEEEECCCCce-eeecCCCCcEEEEEEeCC-EEEEEeCCC-
Q 016224 201 GPWIFIGV-T---------------------------NFVKAWNTQTNTD-LSLSGPVGQVYAMAVGND-LLFAGTQDG- 249 (393)
Q Consensus 201 ~~~l~~~~-~---------------------------~~i~v~d~~~~~~-~~~~~~~~~v~~l~~~~~-~l~~~~~dg- 249 (393)
++.|+... + ..|.+|++.+++. ..+.. . .+..+.|+|+ +++++..+.
T Consensus 115 g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~ 192 (347)
T 2gop_A 115 SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREI 192 (347)
T ss_dssp SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCS
T ss_pred CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccc
Confidence 88776652 2 4789999998877 44444 3 7888999998 666665542
Q ss_pred ------cEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCC--------CcEEEeeCCCcceeeEeccCccc
Q 016224 250 ------AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMD--------NSIRVWNLETLQCIQTLTEHTSV 315 (393)
Q Consensus 250 ------~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d--------g~i~iwd~~~~~~~~~~~~~~~~ 315 (393)
...+|.+..+ + ...+..+ ..+..++.++++|+..+.+ ..|.+|| +++.......+...
T Consensus 193 ~~~~~~~~~l~~~d~~----~-~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~ 264 (347)
T 2gop_A 193 IPQYFKFWDIYIWEDG----K-EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRG 264 (347)
T ss_dssp SCCSSCCEEEEEEETT----E-EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSE
T ss_pred cccccccccEEEeCCC----c-eEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcc
Confidence 4455555422 1 1222223 4555567788877766643 4688888 66655555566677
Q ss_pred eEE-EEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeE-EEEeCC
Q 016224 316 VMS-LLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSV-RFYDLP 388 (393)
Q Consensus 316 v~~-l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I-~iwd~~ 388 (393)
+.. +.|++.++++++.++.++|| +.+ .....+..+ ...+..+.+++ . ++++++.++.. .||.+.
T Consensus 265 ~~~~~~~sdg~~~~~~~~~~~~l~-~~~-g~~~~~~~~--~~~v~~~~~s~--~---~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 265 VGQAKIKDGKVYFTLFEEGSVNLY-IWD-GEIKPIAKG--RHWIMGFDVDE--I---VVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEE-EES-SSEEEEECS--SSEEEEEEESS--S---EEEEEECSSSCCEEEEES
T ss_pred cCCccEEcCcEEEEEecCCcEEEE-EcC-CceEEEecC--CCeEEeeeeeC--c---EEEEEcCCCChHHheEeC
Confidence 775 78873378888999999999 874 344444333 44577888876 2 77777777664 677654
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.60 E-value=6.4e-14 Score=141.17 Aligned_cols=269 Identities=8% Similarity=-0.017 Sum_probs=170.2
Q ss_pred ceEEeeEecCc--EEEecC---------CCeEEEEECCCCcEEE--EEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEE
Q 016224 111 DILCRNWVQGN--CMYGEK---------CKFLHSWTVGDGFKLL--TQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVW 177 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~---------dg~i~vwd~~~~~~~~--~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iw 177 (393)
.+.+.+|++++ +++++. ++.|++||+.++ +.+ ..+ ...+..++|||||+.|+.+. |+.|++|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g-~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~ 135 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG-EFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLK 135 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-EECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC-ccccceec---CcccccceECCCCCEEEEEE-CCeEEEE
Confidence 37899999885 344544 689999999988 442 222 35688999999999999986 7899999
Q ss_pred ECCCCeEEEEEecCC---------------------ceEEEEeCCCEEEEE-cCC-------------------------
Q 016224 178 DCASGQCAGVINLGG---------------------EVGCMISEGPWIFIG-VTN------------------------- 210 (393)
Q Consensus 178 d~~~~~~~~~~~~~~---------------------~~~~~~~~~~~l~~~-~~~------------------------- 210 (393)
|+.+++......... ....+.++++.|+.+ .+.
T Consensus 136 ~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 136 QRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp SSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred eCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 999887654332211 135566899988875 331
Q ss_pred ---------eEEEEECCCCcee---e------ecCCCCcEEEEEEeCC--EEEEEeCC----CcEEEEE----eccCCcc
Q 016224 211 ---------FVKAWNTQTNTDL---S------LSGPVGQVYAMAVGND--LLFAGTQD----GAILAWK----FNVTTNC 262 (393)
Q Consensus 211 ---------~i~v~d~~~~~~~---~------~~~~~~~v~~l~~~~~--~l~~~~~d----g~I~vwd----~~~~~~~ 262 (393)
.|++||+.+++.. . +..+...+..++|+|| ++++.... ..|.+|| +.++..
T Consensus 216 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~- 294 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC- 294 (719)
T ss_dssp BTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC-
T ss_pred CCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce-
Confidence 7889999988642 2 2357788999999999 44443322 2488888 555422
Q ss_pred ccCceee----cCceeeEE-----EEEE--cCCEEE--EecCCC--cEEEeeCCCcceeeEeccCccceEEEEE-cCCEE
Q 016224 263 FEPAASL----KGHSLAVV-----SLVV--GANKLY--SGSMDN--SIRVWNLETLQCIQTLTEHTSVVMSLLC-WDQFL 326 (393)
Q Consensus 263 ~~~~~~~----~~~~~~v~-----~l~~--~~~~l~--sg~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~l~~-~~~~l 326 (393)
...+ ..|...+. .+.| +++.|+ +...++ .|.+||+.+++ ...+..+...+..+.+ .++.|
T Consensus 295 ---~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~d~~~i 370 (719)
T 1z68_A 295 ---PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRVTQDSL 370 (719)
T ss_dssp ---CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEECSSEE
T ss_pred ---EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEEeCCEE
Confidence 1222 23443333 3445 566433 344555 67778887766 4566656555655544 46666
Q ss_pred EEEeCC-----CcEEEEEcCC-Cc--ceEEEEee-c-CCccEEEEEeeeCCCCCcEEEEEeCC--CeEEEEeCCcee
Q 016224 327 LSCSLD-----KTIKVWFATD-SG--NLEVTYTH-N-EEHGVLALCGMPDSEGKPVLLCSCND--NSVRFYDLPSVI 391 (393)
Q Consensus 327 ~s~s~d-----g~i~iwd~~~-~~--~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~l~s~s~d--g~I~iwd~~s~~ 391 (393)
+..+.+ +.+++|.+.. .. ....+... . ....+..+.|+|++. .++++++.+ ..+.+||+.+++
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~--~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAK--YYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGS--SEEEEECCBSSCEEEEECSSSCC
T ss_pred EEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCC--EEEEEcCCCCCCeEEEEECCCCC
Confidence 655554 8899998764 22 12222110 0 223466788888754 345455444 568899987765
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.59 E-value=5.3e-14 Score=142.29 Aligned_cols=231 Identities=8% Similarity=0.038 Sum_probs=153.1
Q ss_pred CEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc------e--EEEEeCCCEEEEEcC----------CeEE
Q 016224 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE------V--GCMISEGPWIFIGVT----------NFVK 213 (393)
Q Consensus 152 ~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~------~--~~~~~~~~~l~~~~~----------~~i~ 213 (393)
...+++|+||+++|+++ |++|++||+.++++...+..+.. . ..+.++++.|+.+.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45578999999999886 99999999999998777765431 1 455689998887644 5778
Q ss_pred EEECCCCceeeecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeE---------------
Q 016224 214 AWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAV--------------- 276 (393)
Q Consensus 214 v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v--------------- 276 (393)
+||+.+++...+..+...+...+|+|| .|+.+ .++.|++|++.++... .....++...+
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~---~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSY---RITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCE---ECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceE---EEcCCCCccceecCcccccccchhcC
Confidence 999999998888888889999999998 66665 5789999998776421 11111221111
Q ss_pred ----EEEEEcCCEEEEecCCC------------------------------------cEEEeeCCC---cc--eeeEec-
Q 016224 277 ----VSLVVGANKLYSGSMDN------------------------------------SIRVWNLET---LQ--CIQTLT- 310 (393)
Q Consensus 277 ----~~l~~~~~~l~sg~~dg------------------------------------~i~iwd~~~---~~--~~~~~~- 310 (393)
..+++++++|+..+.|. .|++||+.+ ++ ....+.
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 23344567777664221 588899988 73 223343
Q ss_pred -----cCccceEEEEEc--CCEEEEEeC----CCcEEEEEcCCCc------ceEEE--EeecCCcc---EEEEEeeeCCC
Q 016224 311 -----EHTSVVMSLLCW--DQFLLSCSL----DKTIKVWFATDSG------NLEVT--YTHNEEHG---VLALCGMPDSE 368 (393)
Q Consensus 311 -----~~~~~v~~l~~~--~~~l~s~s~----dg~i~iwd~~~~~------~~~~~--~~~~~~~~---v~~~~~~~~~~ 368 (393)
+|...+..+.|+ ++.++.... +..|.+||+.+++ ....+ ..+..-.. .....|+|++.
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~ 331 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN 331 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC
Confidence 377788999998 555554432 3479999998776 11222 22221111 23567887754
Q ss_pred CCcEEE-EEeC-C--CeEEEEeCCcee
Q 016224 369 GKPVLL-CSCN-D--NSVRFYDLPSVI 391 (393)
Q Consensus 369 ~~~~l~-s~s~-d--g~I~iwd~~s~~ 391 (393)
.|+ ..+. + ..|++|++.+++
T Consensus 332 ---~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 332 ---SFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp ---EEEEEEECTTSCEEEEEEETTCSS
T ss_pred ---EEEEEEEcCCCceEEEEEECCCCc
Confidence 554 5543 4 458888887653
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.58 E-value=6.1e-13 Score=123.67 Aligned_cols=266 Identities=10% Similarity=0.010 Sum_probs=159.3
Q ss_pred eEEeeEecCc--EEEec-C--CCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 016224 112 ILCRNWVQGN--CMYGE-K--CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAG 186 (393)
Q Consensus 112 i~c~~~~~~~--~~~g~-~--dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 186 (393)
+...+|++++ +++.. . +..|.+||+.++ +......++......+.|+||+++|+.++.++.|.+||+.+++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ-QAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT-EEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCC-cEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 4566788764 33332 2 347899999887 5443333333223347899999999999999999999999988766
Q ss_pred EEecCCceEE----------------------EEeCCCEEEE------EcCCeEEEEECCCCceeeecCCCCcEEEEEEe
Q 016224 187 VINLGGEVGC----------------------MISEGPWIFI------GVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVG 238 (393)
Q Consensus 187 ~~~~~~~~~~----------------------~~~~~~~l~~------~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~ 238 (393)
....+..... +.++++.++. ..+..|.+||+.+++...+..+...+..+.|+
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 6654433110 0122332222 23448999999998877666677789999999
Q ss_pred C-C--EEEEEeCC------CcEEEEEeccCCccccCceeecCc--eeeEEEEEEc--CCEEEEecCC-----CcEEEeeC
Q 016224 239 N-D--LLFAGTQD------GAILAWKFNVTTNCFEPAASLKGH--SLAVVSLVVG--ANKLYSGSMD-----NSIRVWNL 300 (393)
Q Consensus 239 ~-~--~l~~~~~d------g~I~vwd~~~~~~~~~~~~~~~~~--~~~v~~l~~~--~~~l~sg~~d-----g~i~iwd~ 300 (393)
| + .|+..+.+ ..|.+||+..... ..+..+ ...+..+.|+ +++|+..+.+ +.|++||+
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECT
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCce-----eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEEC
Confidence 9 5 45555443 3588888765421 122222 2346666665 5666655433 44999999
Q ss_pred CCcceeeEeccCccceEEEEE---cCCEEEEEe----------------CCCcEEEEEcCCCcceEEEEeecCCc-----
Q 016224 301 ETLQCIQTLTEHTSVVMSLLC---WDQFLLSCS----------------LDKTIKVWFATDSGNLEVTYTHNEEH----- 356 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~v~~l~~---~~~~l~s~s----------------~dg~i~iwd~~~~~~~~~~~~~~~~~----- 356 (393)
.+++......... .. +.| +++++++++ .+..|.+||+.++.. ..+..+....
T Consensus 272 ~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~ 347 (396)
T 3c5m_A 272 ETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDG 347 (396)
T ss_dssp TTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTT
T ss_pred CCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccc
Confidence 8876543322111 12 455 456777654 347899999976654 3333332210
Q ss_pred ----cEEEEEeeeCCCCCcEEEEEe-CCCeEEEE--eCCce
Q 016224 357 ----GVLALCGMPDSEGKPVLLCSC-NDNSVRFY--DLPSV 390 (393)
Q Consensus 357 ----~v~~~~~~~~~~~~~~l~s~s-~dg~I~iw--d~~s~ 390 (393)
....+.|+|++. .|+..+ .++...|| ++.++
T Consensus 348 ~~~~~~~~~~~s~dg~---~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 348 DRQITHPHPSFTPNDD---GVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp BSSTTCCCCEECTTSS---EEEEEECTTSSCEEEEEECCTT
T ss_pred cccCCCCCceEccCCC---eEEEEecCCCCceEEEEEEccc
Confidence 134567777644 555554 45554444 44444
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.57 E-value=4.7e-13 Score=122.14 Aligned_cols=217 Identities=12% Similarity=0.096 Sum_probs=142.7
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCC--ce--EEEEeCCCEEEEE--cCCeEEEEECCCCcee-eecC
Q 016224 155 GITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGG--EV--GCMISEGPWIFIG--VTNFVKAWNTQTNTDL-SLSG 227 (393)
Q Consensus 155 ~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~--~~--~~~~~~~~~l~~~--~~~~i~v~d~~~~~~~-~~~~ 227 (393)
.+++++++.++++++.+++|.+||+.+++.+..+..+. .. ..+.++++.++++ .++.|.+||+.+++.. .+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678889999999999999999999999988887655 22 3445678766544 5679999999998876 3322
Q ss_pred C------CCcEEEEEEeCC--EEEEEeCC------------CcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCE
Q 016224 228 P------VGQVYAMAVGND--LLFAGTQD------------GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANK 285 (393)
Q Consensus 228 ~------~~~v~~l~~~~~--~l~~~~~d------------g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 285 (393)
. ...+..++|+|+ +|++++.+ +.|.+||+.++... +....... ...+.+++++ ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~-~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-KPVRTFPM-PRQVYLMRAADDGS- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-CCSEEEEC-CSSCCCEEECTTSC-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-ceeeeccC-CCcccceeECCCCc-
Confidence 2 223778899988 77777755 89999999875321 22233322 2245566664 56
Q ss_pred EEEecCCCcEEEeeCCCcceeeEeccCcc------------------------ceEEEEEcC-------------CEEEE
Q 016224 286 LYSGSMDNSIRVWNLETLQCIQTLTEHTS------------------------VVMSLLCWD-------------QFLLS 328 (393)
Q Consensus 286 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~------------------------~v~~l~~~~-------------~~l~s 328 (393)
+++++. .|.+||+.+++.+..+..+.. ....+.+.. .++..
T Consensus 161 l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 555543 499999999988877754320 112233331 01112
Q ss_pred EeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeee-CCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 329 CSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMP-DSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 329 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
...++.+++|++ .........++++| ++. +|+++ ++.|.+||+.++++
T Consensus 239 ~~~~~~~~~~~~-----------~~~~~~~~~~~~sp~dg~---~l~~~--~~~v~~~d~~~~~~ 287 (349)
T 1jmx_B 239 DLKTGKTHTQEF-----------ADLTELYFTGLRSPKDPN---QIYGV--LNRLAKYDLKQRKL 287 (349)
T ss_dssp ETTTCCEEEEEE-----------EECSSCEEEEEECSSCTT---EEEEE--ESEEEEEETTTTEE
T ss_pred eccCCcEEeccc-----------ccCCCcceeeEecCCCCC---EEEEE--cCeEEEEECccCeE
Confidence 223344444443 12334577888887 655 77777 88999999998764
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.56 E-value=7.6e-12 Score=113.81 Aligned_cols=232 Identities=14% Similarity=0.105 Sum_probs=161.1
Q ss_pred cCCEEEEEecCCCCEEEEEeCC------------------------CcEEEEECCCCeEEEEEecCC--ce--EEEEeCC
Q 016224 150 QKVVSGITLPSGSDKLYSGSKD------------------------ETVRVWDCASGQCAGVINLGG--EV--GCMISEG 201 (393)
Q Consensus 150 ~~~I~~i~~s~~~~~l~s~s~d------------------------g~v~iwd~~~~~~~~~~~~~~--~~--~~~~~~~ 201 (393)
-..+.+|+++++++++++...+ ++|.+||..+++.+..+.... .+ ..+.+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3679999999999999888777 479999999998877665321 22 2333578
Q ss_pred CEEEEE-cCCeEEEEECCCCc--eeee---------cCCCCcEEEEEEeC-C--EEEEEe-CCCcEEEEEeccCCccccC
Q 016224 202 PWIFIG-VTNFVKAWNTQTNT--DLSL---------SGPVGQVYAMAVGN-D--LLFAGT-QDGAILAWKFNVTTNCFEP 265 (393)
Q Consensus 202 ~~l~~~-~~~~i~v~d~~~~~--~~~~---------~~~~~~v~~l~~~~-~--~l~~~~-~dg~I~vwd~~~~~~~~~~ 265 (393)
.++++. .++.|++|+..... ...+ ..+......+++++ + ++++.+ .++.|++|+.. + ..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g----~~ 177 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-G----KF 177 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-S----CE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-C----CE
Confidence 877776 46799999987652 2233 24455789999998 4 556654 58999999843 2 22
Q ss_pred ceeec----------CceeeEEEEEEc---CCEEEEecCCCcEEEeeCCCcceeeEec--cCccceEEEEEcCCEEEEE-
Q 016224 266 AASLK----------GHSLAVVSLVVG---ANKLYSGSMDNSIRVWNLETLQCIQTLT--EHTSVVMSLLCWDQFLLSC- 329 (393)
Q Consensus 266 ~~~~~----------~~~~~v~~l~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~~l~s~- 329 (393)
+..+. ++-.....++++ +.++++...++.|++||..+++.+.++. .+...+..+++.+.+++..
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeC
Confidence 22221 122335677775 3466777788999999999899888884 3555677787775443333
Q ss_pred -------eCCCcEEEEEcCCCcceEEEEe-ecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 330 -------SLDKTIKVWFATDSGNLEVTYT-HNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 330 -------s~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
..+..|++||+.+++.+..+.. .........+++.+++ .++++...++.|++|++..
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG---~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG---TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS---EEEEEESSSCCEEEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC---CEEEEECCCCEEEEEeCCc
Confidence 2345899999988776655431 1223447788887764 3888888999999999754
No 169
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.56 E-value=2e-12 Score=117.66 Aligned_cols=256 Identities=10% Similarity=-0.042 Sum_probs=166.5
Q ss_pred ecCCCeEEEEECCCCcEEEEEec------CCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEE-
Q 016224 125 GEKCKFLHSWTVGDGFKLLTQLE------GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM- 197 (393)
Q Consensus 125 g~~dg~i~vwd~~~~~~~~~~l~------~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~- 197 (393)
|+.++.|.+||.+++ +....+. ........+.+. ++++.++...++.|.+||..+++.+.++........+
T Consensus 13 g~~~~~l~~~d~~t~-~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~ 90 (328)
T 3dsm_A 13 QYSNATLSYYDPATC-EVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIH 90 (328)
T ss_dssp TSCCBEEEEEETTTT-EEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEE
T ss_pred CCCCceEEEEECCCC-EEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEE
Confidence 455899999999988 6554431 123456778875 3445555566799999999999998888654444333
Q ss_pred E-eCCCEEEEE-cCCeEEEEECCCCceeeecCCCC------cEEEEEEeCCEEEEEe--CCCcEEEEEeccCCccccCce
Q 016224 198 I-SEGPWIFIG-VTNFVKAWNTQTNTDLSLSGPVG------QVYAMAVGNDLLFAGT--QDGAILAWKFNVTTNCFEPAA 267 (393)
Q Consensus 198 ~-~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~~~~------~v~~l~~~~~~l~~~~--~dg~I~vwd~~~~~~~~~~~~ 267 (393)
. +++.+.++. .++.|.+||..+++......... ....+++....|+++. .++.|.++|+.+.. ...
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~----~~~ 166 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDK----VVD 166 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTE----EEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCe----EEE
Confidence 3 566544444 58899999999988763222122 4556777666655555 48899999998763 222
Q ss_pred eecCceeeEEEEEEc--CCEEEEecCC----------CcEEEeeCCCcceeeEeccC-ccceEEEEEc--CCEEEEEeCC
Q 016224 268 SLKGHSLAVVSLVVG--ANKLYSGSMD----------NSIRVWNLETLQCIQTLTEH-TSVVMSLLCW--DQFLLSCSLD 332 (393)
Q Consensus 268 ~~~~~~~~v~~l~~~--~~~l~sg~~d----------g~i~iwd~~~~~~~~~~~~~-~~~v~~l~~~--~~~l~s~s~d 332 (393)
.+... .....+.++ +++++++..+ +.|.++|..+++.+..+... ......++++ +++|+++..
T Consensus 167 ~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 167 ELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 22211 112344444 4555555544 78999999999888777543 2357888888 567777654
Q ss_pred CcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEE----eCCCeEEEEeCCceee
Q 016224 333 KTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCS----CNDNSVRFYDLPSVII 392 (393)
Q Consensus 333 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~----s~dg~I~iwd~~s~~l 392 (393)
.|.+||..+++................+++.|+ ++.++++. ..++.|.+||.. +++
T Consensus 245 -~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~--~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN--NGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT--TCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred -EEEEEECCCCceeeeeeecCCCCceEEEEEcCC--CCeEEEEcccccccCCEEEEECCC-CCE
Confidence 899999976654211111111234677888764 33366666 678999999987 653
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.55 E-value=2.2e-13 Score=137.76 Aligned_cols=271 Identities=8% Similarity=0.014 Sum_probs=167.9
Q ss_pred ceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCC-----EEEEEecCCCCEEEEEeCC---------CcEEE
Q 016224 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKV-----VSGITLPSGSDKLYSGSKD---------ETVRV 176 (393)
Q Consensus 111 ~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~-----I~~i~~s~~~~~l~s~s~d---------g~v~i 176 (393)
....+.|++++.++.+.|+.|++||+.++ +....+.+|... ...++||||+++|+.++.+ +.+.+
T Consensus 18 ~~~~~~w~~dg~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQENNILVFNAEYG-NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCCEEECSSSEEEEEETTEEEEEETTTC-CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cccccEECCCCcEEEEcCCcEEEEECCCC-ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 34578999886554434999999999998 666677877643 2447889999999999876 56679
Q ss_pred EECCCCeEEEEEecCCce--EEEEeCCCEEEEEcCCeEEEEECCCCceeeec--CCCCcE-----------------EEE
Q 016224 177 WDCASGQCAGVINLGGEV--GCMISEGPWIFIGVTNFVKAWNTQTNTDLSLS--GPVGQV-----------------YAM 235 (393)
Q Consensus 177 wd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~--~~~~~v-----------------~~l 235 (393)
||+.+++..........+ ..+.++|+.|+...++.|++|+..++....+. ++...+ ..+
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcce
Confidence 999999866433323333 34568999999889999999999988765432 333323 348
Q ss_pred EEeCC--EEEEEeCCC------------------------------------cEEEEEecc---CCccccCceeec----
Q 016224 236 AVGND--LLFAGTQDG------------------------------------AILAWKFNV---TTNCFEPAASLK---- 270 (393)
Q Consensus 236 ~~~~~--~l~~~~~dg------------------------------------~I~vwd~~~---~~~~~~~~~~~~---- 270 (393)
.|+|| .|+..+.|. .|++||+.+ +... ....+.
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~--~~~~l~~~~~ 254 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA--TSIQITAPAS 254 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC--CEEEECCCHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc--eEEEecCCcc
Confidence 89998 666654322 467777776 4210 111222
Q ss_pred --CceeeEEEEEEc--CCEEEEe----cCCCcEEEeeCCCcc----ee--eEe--ccCccceE-----EEEEc--CCEEE
Q 016224 271 --GHSLAVVSLVVG--ANKLYSG----SMDNSIRVWNLETLQ----CI--QTL--TEHTSVVM-----SLLCW--DQFLL 327 (393)
Q Consensus 271 --~~~~~v~~l~~~--~~~l~sg----~~dg~i~iwd~~~~~----~~--~~~--~~~~~~v~-----~l~~~--~~~l~ 327 (393)
+|...+..++|+ ++.++.. ..+..|.+||+.+++ +. ..+ ..|...+. ...|+ ++.|+
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 366677777775 5544443 234479999999887 22 222 34554443 56676 56655
Q ss_pred -EEeC-CC--cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC----CC--eEEEEeCCce
Q 016224 328 -SCSL-DK--TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN----DN--SVRFYDLPSV 390 (393)
Q Consensus 328 -s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~----dg--~I~iwd~~s~ 390 (393)
..+. +| .|.+||+..+.. ..+... .-.+..+.. ++ ++.+++++.. .+ .|+..++..+
T Consensus 335 ~~~s~~~G~~~l~~~~~~~~~~-~~lT~g--~~~v~~~~~-~d--~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 335 KIISNEEGYRHICYFQIDKKDC-TFITKG--TWEVIGIEA-LT--SDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp EEEECTTSCEEEEEEETTCSSC-EESCCS--SSCEEEEEE-EC--SSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred EEEEcCCCceEEEEEECCCCce-EecccC--CEEEEEEEE-Ee--CCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 5553 44 588888865443 333322 223444432 44 3445555554 23 4555555443
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.54 E-value=9.3e-13 Score=121.68 Aligned_cols=230 Identities=10% Similarity=0.035 Sum_probs=145.0
Q ss_pred ceEEeeEecCc--EEEecCCCeEEEEECC-CCcEEEEEec--CCcCCEEEEEecCCCCE--EEEEe-------------C
Q 016224 111 DILCRNWVQGN--CMYGEKCKFLHSWTVG-DGFKLLTQLE--GHQKVVSGITLPSGSDK--LYSGS-------------K 170 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~dg~i~vwd~~-~~~~~~~~l~--~h~~~I~~i~~s~~~~~--l~s~s-------------~ 170 (393)
.+..++|++++ +++++.+ .|.+|++. ++ ++..... .+ +.+..++|+|++++ ++++. .
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCC-CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 45678888774 4456655 99999997 76 5543322 11 23556899999994 55553 6
Q ss_pred CCcEEEEECC-CCeEEEEEe-----cCCceE--EEEeCCCEEEEE--cCCeEEEEECC-CCcee---eec--CCCCcEEE
Q 016224 171 DETVRVWDCA-SGQCAGVIN-----LGGEVG--CMISEGPWIFIG--VTNFVKAWNTQ-TNTDL---SLS--GPVGQVYA 234 (393)
Q Consensus 171 dg~v~iwd~~-~~~~~~~~~-----~~~~~~--~~~~~~~~l~~~--~~~~i~v~d~~-~~~~~---~~~--~~~~~v~~ 234 (393)
++++.+|++. +++....+. ....+. .+.+++++++++ .++.|.+|++. +++.. .+. .+...+..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 8999999997 466554443 222333 344688888775 35699999998 66643 222 23567899
Q ss_pred EEEeCC--EEEEEe-CCCcEEEEEeccCCcccc----Cceeec----Ccee------eEEEEE-Ec--CCEEEEecCC-C
Q 016224 235 MAVGND--LLFAGT-QDGAILAWKFNVTTNCFE----PAASLK----GHSL------AVVSLV-VG--ANKLYSGSMD-N 293 (393)
Q Consensus 235 l~~~~~--~l~~~~-~dg~I~vwd~~~~~~~~~----~~~~~~----~~~~------~v~~l~-~~--~~~l~sg~~d-g 293 (393)
++|+|+ +|+++. .++.|.+|++........ .+..+. +|.. .+..++ ++ +++|+++..+ .
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 999998 666665 478999998864221111 011111 2221 466666 64 6677766543 2
Q ss_pred -----cEEEeeCC-Ccceee---EeccCccceEE--EEE---cCCEEEEEeCC-CcEEEEEcCCC
Q 016224 294 -----SIRVWNLE-TLQCIQ---TLTEHTSVVMS--LLC---WDQFLLSCSLD-KTIKVWFATDS 343 (393)
Q Consensus 294 -----~i~iwd~~-~~~~~~---~~~~~~~~v~~--l~~---~~~~l~s~s~d-g~i~iwd~~~~ 343 (393)
.|.+|++. +++... .+..+...... +.. ++++|++++.+ +.|.+|++...
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999996 566543 23223322333 344 47899888864 89999998654
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.53 E-value=1.3e-12 Score=120.48 Aligned_cols=245 Identities=10% Similarity=0.036 Sum_probs=158.6
Q ss_pred EeeEecCc--EEEec----------CCCeEEEEECCCCcEEEEEecCC------cCCEEEEEecCCCCEEEEEeC--CCc
Q 016224 114 CRNWVQGN--CMYGE----------KCKFLHSWTVGDGFKLLTQLEGH------QKVVSGITLPSGSDKLYSGSK--DET 173 (393)
Q Consensus 114 c~~~~~~~--~~~g~----------~dg~i~vwd~~~~~~~~~~l~~h------~~~I~~i~~s~~~~~l~s~s~--dg~ 173 (393)
.+.+++++ ++++. .++.|.+||..+. +.+.++... ......++|+|++++|+++.. +++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~-~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~ 132 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL-TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC-CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC-cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCe
Confidence 77888874 33332 3678999999887 677766532 345667899999999998864 689
Q ss_pred EEEEECCCCeEEEE-EecCCceEE-EEeCC--CEEEEEcCCeEEEEECCC-Ccee-e------ecCCCCcEEEEEEeC--
Q 016224 174 VRVWDCASGQCAGV-INLGGEVGC-MISEG--PWIFIGVTNFVKAWNTQT-NTDL-S------LSGPVGQVYAMAVGN-- 239 (393)
Q Consensus 174 v~iwd~~~~~~~~~-~~~~~~~~~-~~~~~--~~l~~~~~~~i~v~d~~~-~~~~-~------~~~~~~~v~~l~~~~-- 239 (393)
|.+||+.+++.+.. +........ +.+++ .+++.+.|+.+.+|+... ++.. . +.....++ .+.+.+
T Consensus 133 v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g 211 (361)
T 2oiz_A 133 IGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDK 211 (361)
T ss_dssp EEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECS
T ss_pred EEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccC
Confidence 99999999998887 665543222 23433 344456788888888765 4333 1 11111111 111222
Q ss_pred CEEEEEeCCCcEEEEEeccCCccccCceeec------------CceeeEEEEEEcCCEEEEecC-----------CCcEE
Q 016224 240 DLLFAGTQDGAILAWKFNVTTNCFEPAASLK------------GHSLAVVSLVVGANKLYSGSM-----------DNSIR 296 (393)
Q Consensus 240 ~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~------------~~~~~v~~l~~~~~~l~sg~~-----------dg~i~ 296 (393)
..++..+.++.|.++|+...... ....+. ........+..++++++++.. .+.|.
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~ 289 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVK--VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIW 289 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCE--EEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCce--ecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEE
Confidence 35566678899999998654321 111100 011112345556676665432 35899
Q ss_pred EeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCC--cceEEEEeecCCccEEEEEeeeCC
Q 016224 297 VWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDS--GNLEVTYTHNEEHGVLALCGMPDS 367 (393)
Q Consensus 297 iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~ 367 (393)
+||+.+++.+.++..+. ...++++ +++|++++. +.|.+||..++ +.+..+... ......+++.|++
T Consensus 290 viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~--G~~P~~~~~~p~G 359 (361)
T 2oiz_A 290 VMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA--AEASLQVQFHPVG 359 (361)
T ss_dssp EEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS--CSSEEEEEECCCS
T ss_pred EEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC--CCCcEEEEecCCC
Confidence 99999999999998877 8888887 678888886 99999999887 655544322 2346677777764
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=1.3e-12 Score=130.39 Aligned_cols=278 Identities=10% Similarity=-0.067 Sum_probs=173.1
Q ss_pred ceeecceEEeeEecCcEEE--e--cCCCeEEEEECCCCcEEEEEecCCcCCEE---------EEEec--CCCCE-EEEEe
Q 016224 106 AVIKTDILCRNWVQGNCMY--G--EKCKFLHSWTVGDGFKLLTQLEGHQKVVS---------GITLP--SGSDK-LYSGS 169 (393)
Q Consensus 106 ~~~~~~i~c~~~~~~~~~~--g--~~dg~i~vwd~~~~~~~~~~l~~h~~~I~---------~i~~s--~~~~~-l~s~s 169 (393)
..|...+...+++++.++. . +.++...||....+ .....+..|...+. ...|+ ||+++ |+.++
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD-GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT-SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC-CCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 3455678889999887664 3 45888999986544 34567777776666 66665 99998 77655
Q ss_pred C-CCcEEEEECC--C-CeEEEEEec------CCce--EEEEeCCCEEEEE-cC----------CeEEEEECCC------C
Q 016224 170 K-DETVRVWDCA--S-GQCAGVINL------GGEV--GCMISEGPWIFIG-VT----------NFVKAWNTQT------N 220 (393)
Q Consensus 170 ~-dg~v~iwd~~--~-~~~~~~~~~------~~~~--~~~~~~~~~l~~~-~~----------~~i~v~d~~~------~ 220 (393)
. +..|.+|++. . ++. ..+.. .... ..+.++++.|+.. .+ ..|++||+.+ +
T Consensus 99 ~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp TTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred CCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence 4 5677777776 3 443 33332 1122 3455789888765 33 4899999998 6
Q ss_pred ceeeec-CCCCcEEEEEEeCC--EEEEEeCC--------CcEEEEEec-cCCccccCceeecCceeeEEEEEEc--CCEE
Q 016224 221 TDLSLS-GPVGQVYAMAVGND--LLFAGTQD--------GAILAWKFN-VTTNCFEPAASLKGHSLAVVSLVVG--ANKL 286 (393)
Q Consensus 221 ~~~~~~-~~~~~v~~l~~~~~--~l~~~~~d--------g~I~vwd~~-~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l 286 (393)
+...+. .+...+..++|+|| .|+.++.+ ..|++||+. ++.. .+.......+...+..+.|+ ++++
T Consensus 178 ~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~-~~~~~l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 178 AVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF-ADTRTLLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp GSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE-EEEEEEEEETTBCEEEEEECTTSCEE
T ss_pred ceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc-cccEEeCCCCCceEcceEECCCCeEE
Confidence 666666 66778888999998 67766644 379999998 3410 01122223345677777775 5677
Q ss_pred EEecCCC--cEEEeeCCCcceeeEeccCccc--------eEEEEEc--CCEEEEEeCCCcEEEEEcCC-CcceEEEEeec
Q 016224 287 YSGSMDN--SIRVWNLETLQCIQTLTEHTSV--------VMSLLCW--DQFLLSCSLDKTIKVWFATD-SGNLEVTYTHN 353 (393)
Q Consensus 287 ~sg~~dg--~i~iwd~~~~~~~~~~~~~~~~--------v~~l~~~--~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~ 353 (393)
+++..++ .|.+||+.+++.......+... +..+.++ +.++++++. +.++||.+.. ...+..+..+
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~- 334 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGP- 334 (662)
T ss_dssp EEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSS-
T ss_pred EEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCC-
Confidence 7887888 6777787677655444433322 4567775 668888888 9999994432 2334444333
Q ss_pred CCccEEEEEeeeCCCCCcEEEEEeCCC--eEEEEeCCcee
Q 016224 354 EEHGVLALCGMPDSEGKPVLLCSCNDN--SVRFYDLPSVI 391 (393)
Q Consensus 354 ~~~~v~~~~~~~~~~~~~~l~s~s~dg--~I~iwd~~s~~ 391 (393)
...+..+ +++++. ..++++++.+. .|.+||+.+++
T Consensus 335 -~~~~~~~-~s~~~~-~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 335 -WTEWAAT-LTVSGT-RAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp -CCEEEEE-EEEETT-EEEEEEEETTEEEEEEEEETTTCC
T ss_pred -CCeEEEE-EecCCC-EEEEEEcCCCCCCEEEEEECCCCc
Confidence 2234444 144432 22344445554 45566666654
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=4.9e-11 Score=116.02 Aligned_cols=257 Identities=14% Similarity=0.097 Sum_probs=174.2
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECC--CCeEEEEEecCCceEE--EE
Q 016224 123 MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCA--SGQCAGVINLGGEVGC--MI 198 (393)
Q Consensus 123 ~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~--~~~~~~~~~~~~~~~~--~~ 198 (393)
++...++.|.++|..++ +.+.++... ..+..+.|+||+++|++++.|+.|.+||+. +++.+..+........ +.
T Consensus 171 V~~~~~~~V~viD~~t~-~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s 248 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTY-EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS 248 (567)
T ss_dssp EEETTTTEEEEEETTTC-CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEEC
T ss_pred EEeCCCCeEEEEECCCC-eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEc
Confidence 45778899999999998 788887643 467799999999999999999999999996 8888888876654433 33
Q ss_pred ----eCCCEEEEE--cCCeEEEEECCCCceeee-c--C--------C-CCcEEEEEEeCC---EEEEEeCCCcEEEEEec
Q 016224 199 ----SEGPWIFIG--VTNFVKAWNTQTNTDLSL-S--G--------P-VGQVYAMAVGND---LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 199 ----~~~~~l~~~--~~~~i~v~d~~~~~~~~~-~--~--------~-~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~ 257 (393)
+++++++++ .++.|.++|..+.+.+.. . + | ...+..+..+++ +++....+|.|.++|..
T Consensus 249 ~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~ 328 (567)
T 1qks_A 249 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 328 (567)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred cccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC
Confidence 378888876 668999999999887622 1 1 1 226778888775 66666778999999987
Q ss_pred cCCccccCceeecCceeeEEEEEE--cCCEEEE-ecCCCcEEEeeCCCcceeeEecc-----CccceEEEEEc--CC-EE
Q 016224 258 VTTNCFEPAASLKGHSLAVVSLVV--GANKLYS-GSMDNSIRVWNLETLQCIQTLTE-----HTSVVMSLLCW--DQ-FL 326 (393)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~l~~--~~~~l~s-g~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~--~~-~l 326 (393)
..... .+..+. .......+.| ++++|++ ...++.|.++|+.+++.+..+.. |.+.-..+ ++ +. .+
T Consensus 329 ~~~~~--~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~ 404 (567)
T 1qks_A 329 DLNNL--KTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVW 404 (567)
T ss_dssp CSSEE--EEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEE
T ss_pred CCccc--eeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEE
Confidence 64210 111111 1122334455 4666554 45688999999999998877654 32222223 23 23 44
Q ss_pred EEEe-CCCcEEEEEcCC-------CcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC-------CCeEEEEeCCce
Q 016224 327 LSCS-LDKTIKVWFATD-------SGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN-------DNSVRFYDLPSV 390 (393)
Q Consensus 327 ~s~s-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~-------dg~I~iwd~~s~ 390 (393)
++.. .+++|.++|... .+.+..+.... .....+..+|+++ +|.+... .+.|.++|+.+.
T Consensus 405 ~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~---~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQ---YLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCS---EEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EeCCCCCCeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCC---eEEEecCCCCCcccCceEEEEECCcc
Confidence 4443 468999999876 33444444332 2233455666554 7777653 459999999876
No 175
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.52 E-value=3.1e-11 Score=111.78 Aligned_cols=265 Identities=12% Similarity=0.076 Sum_probs=173.6
Q ss_pred ecCcEEEecCCCeEEEEECCCCcEEEEEecCC---------cCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 118 VQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGH---------QKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 118 ~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h---------~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
..+.+++++.++.|+.+|..++ +.+...... ...+.+.- ..++..|+.++.++.|..+|..+++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDG-KEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTC-CEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCC-ceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 4667778888999999999998 555554432 22332222 124567888999999999999999998888
Q ss_pred ecCCceE--EEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcE------EEEEEeCCEEEEEeCCCcEEEEEeccCC
Q 016224 189 NLGGEVG--CMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQV------YAMAVGNDLLFAGTQDGAILAWKFNVTT 260 (393)
Q Consensus 189 ~~~~~~~--~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v------~~l~~~~~~l~~~~~dg~I~vwd~~~~~ 260 (393)
.....+. ....++.+++...++.|..+|..+++.+-.......+ .......+.+++++.++.|..+|..++.
T Consensus 130 ~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 130 KVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp ECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCC
T ss_pred eCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCc
Confidence 7654331 2234554555557889999999999876222222222 2233445688888999999999998775
Q ss_pred ccccCceeecCcee---e---E-EEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEEeCCC
Q 016224 261 NCFEPAASLKGHSL---A---V-VSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDK 333 (393)
Q Consensus 261 ~~~~~~~~~~~~~~---~---v-~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~dg 333 (393)
..++.......... . + ......++.++.++.++.|..+|.++++.+..... .....+...+..++.++.++
T Consensus 210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~~l~~~~~~g 287 (376)
T 3q7m_A 210 MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIVDGNRIYLVDQND 287 (376)
T ss_dssp EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEEETTEEEEEETTC
T ss_pred EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceEECCEEEEEcCCC
Confidence 32221100000000 0 0 11123467888888999999999999998876653 33456666788999999999
Q ss_pred cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 334 TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 334 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
.|..+|..+++.+......... ....... ... .|+.++.+|.|.++|..++++
T Consensus 288 ~l~~~d~~tG~~~w~~~~~~~~-~~~~~~~--~~~---~l~v~~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 288 RVMALTIDGGVTLWTQSDLLHR-LLTSPVL--YNG---NLVVGDSEGYLHWINVEDGRF 340 (376)
T ss_dssp CEEEEETTTCCEEEEECTTTTS-CCCCCEE--ETT---EEEEECTTSEEEEEETTTCCE
T ss_pred eEEEEECCCCcEEEeecccCCC-cccCCEE--ECC---EEEEEeCCCeEEEEECCCCcE
Confidence 9999999888765443311111 1111111 122 688899999999999998875
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=7e-12 Score=116.33 Aligned_cols=248 Identities=10% Similarity=0.016 Sum_probs=155.9
Q ss_pred EECCCCcEEEEEecCCcCCEEE-----EEecCCCCEEEEEeC-CC--cEEEEECCCCeEEEEEecCCce---EEEEeCCC
Q 016224 134 WTVGDGFKLLTQLEGHQKVVSG-----ITLPSGSDKLYSGSK-DE--TVRVWDCASGQCAGVINLGGEV---GCMISEGP 202 (393)
Q Consensus 134 wd~~~~~~~~~~l~~h~~~I~~-----i~~s~~~~~l~s~s~-dg--~v~iwd~~~~~~~~~~~~~~~~---~~~~~~~~ 202 (393)
+|..++ ..+..+..|...... .+|+|||++|+.++. ++ .|.+||+.+++........... ..+.++++
T Consensus 15 ~~~~~g-~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 15 QDASTG-AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp ECTTTC-CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS
T ss_pred ecCCCC-cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC
Confidence 466667 677788888877776 889999999999887 66 4888899998877666544322 35667888
Q ss_pred EEEEE-cCCeEEEEECCCCceee-ecCCCCcEEEEE--EeCC--EEEEE----------------------eCCCcEEEE
Q 016224 203 WIFIG-VTNFVKAWNTQTNTDLS-LSGPVGQVYAMA--VGND--LLFAG----------------------TQDGAILAW 254 (393)
Q Consensus 203 ~l~~~-~~~~i~v~d~~~~~~~~-~~~~~~~v~~l~--~~~~--~l~~~----------------------~~dg~I~vw 254 (393)
.|+.. .++.|++||+.+++... ...+...+.... ++++ +++.. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 87766 56799999999988763 334444444333 3666 44422 234678999
Q ss_pred EeccCCccccCceeecCceeeEEEEEEcC---CEEEEecC------CCcEEEeeCCCcceeeEeccCc--cceEEEEEc-
Q 016224 255 KFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGSM------DNSIRVWNLETLQCIQTLTEHT--SVVMSLLCW- 322 (393)
Q Consensus 255 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~~------dg~i~iwd~~~~~~~~~~~~~~--~~v~~l~~~- 322 (393)
|+.++.. ..+..+...+..+.+++ +.|+.... ...|.++|+..++. ..+..+. ..+..+.|+
T Consensus 174 d~~~g~~-----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 174 DLKTGES-----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp ETTTCCE-----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECT
T ss_pred ECCCCce-----EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECC
Confidence 9887632 22333444556666654 56666554 33788888876543 4444444 357778887
Q ss_pred -CCEEEEEeC-CC----cEEEEEcCCCcceEEEEeecCCccE----EEEEeeeCCCCCcEEEEE---------eCCCeEE
Q 016224 323 -DQFLLSCSL-DK----TIKVWFATDSGNLEVTYTHNEEHGV----LALCGMPDSEGKPVLLCS---------CNDNSVR 383 (393)
Q Consensus 323 -~~~l~s~s~-dg----~i~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~~l~s~---------s~dg~I~ 383 (393)
++.|+..+. ++ .|.+||+.+++.... ......... ....|+|++. .|+.. ..+..|+
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~~~~~~~spdg~---~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLENRQL-TSMPACSHLMSNYDGSLMVGDGS---DAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCEEEE-EEECCEEEEEECTTSSEEEEEEC---CC------------CCCCEEE
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCceEEE-EcCCCceeeeecCCCCeEccCCC---cceeEeeeccccccCCCCEEE
Confidence 565544333 22 399999987664322 221110000 1125778755 44432 5567899
Q ss_pred EEeCCceee
Q 016224 384 FYDLPSVII 392 (393)
Q Consensus 384 iwd~~s~~l 392 (393)
+||+.++++
T Consensus 324 ~~d~~~~~~ 332 (388)
T 3pe7_A 324 VFNMKNGTQ 332 (388)
T ss_dssp EEETTTTEE
T ss_pred EEeccCCce
Confidence 999988753
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.50 E-value=4.9e-11 Score=108.46 Aligned_cols=207 Identities=11% Similarity=0.090 Sum_probs=145.0
Q ss_pred CeEEEEECCCCcEEEEEec-CCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe-EEEEEecC-----------Cce-
Q 016224 129 KFLHSWTVGDGFKLLTQLE-GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ-CAGVINLG-----------GEV- 194 (393)
Q Consensus 129 g~i~vwd~~~~~~~~~~l~-~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~-~~~~~~~~-----------~~~- 194 (393)
+.|.+||..++ +.+..+. ++-.....|+++++++++++...++.|++||..... .+..+... .+.
T Consensus 69 ~~i~~~d~~~g-~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 69 DTILVIDPNNA-EILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CCEEEECTTTC-CEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CcEEEEECCCC-eEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 37999999888 6665554 455789999999999988888889999999986542 45555310 122
Q ss_pred EEEEe-CCCEEEEE--cCCeEEEEECCCCcee-eec----------CCCCcEEEEEEeCC---EEEEEeCCCcEEEEEec
Q 016224 195 GCMIS-EGPWIFIG--VTNFVKAWNTQTNTDL-SLS----------GPVGQVYAMAVGND---LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 195 ~~~~~-~~~~l~~~--~~~~i~v~d~~~~~~~-~~~----------~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~ 257 (393)
..+.+ ++.++++. .++.|++|+. .+..+ .+. .+......++++++ ++++...++.|++||..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 22334 67777776 3679999994 44444 332 12234889999875 66677788899999988
Q ss_pred cCCccccCceee--cCceeeEEEEEEcCCEEE--------EecCCCcEEEeeCCCcceeeEec---cCccceEEEEEc--
Q 016224 258 VTTNCFEPAASL--KGHSLAVVSLVVGANKLY--------SGSMDNSIRVWNLETLQCIQTLT---EHTSVVMSLLCW-- 322 (393)
Q Consensus 258 ~~~~~~~~~~~~--~~~~~~v~~l~~~~~~l~--------sg~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~l~~~-- 322 (393)
++ +.+..+ ..+...+..+++.+..++ +...+..|++||+.+++.+..+. .+......|+++
T Consensus 227 ~G----~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 227 TK----EFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED 302 (329)
T ss_dssp TC----CEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT
T ss_pred CC----cEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC
Confidence 55 223333 234445566666554333 23345689999999999998884 566678899998
Q ss_pred CCEEEEEeCCCcEEEEEcC
Q 016224 323 DQFLLSCSLDKTIKVWFAT 341 (393)
Q Consensus 323 ~~~l~s~s~dg~i~iwd~~ 341 (393)
+.++++...++.|++|++.
T Consensus 303 G~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 303 GTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp SEEEEEESSSCCEEEEEEE
T ss_pred CCEEEEECCCCEEEEEeCC
Confidence 5577778889999999975
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.49 E-value=7.1e-11 Score=104.86 Aligned_cols=223 Identities=9% Similarity=0.125 Sum_probs=150.0
Q ss_pred ceEEeeEecC-cEEE-ecCCCeEEEEECCCCcEEEEEec------CCcCCEEEEEe-cCCCCEEEEEeC-CCcEEEEECC
Q 016224 111 DILCRNWVQG-NCMY-GEKCKFLHSWTVGDGFKLLTQLE------GHQKVVSGITL-PSGSDKLYSGSK-DETVRVWDCA 180 (393)
Q Consensus 111 ~i~c~~~~~~-~~~~-g~~dg~i~vwd~~~~~~~~~~l~------~h~~~I~~i~~-s~~~~~l~s~s~-dg~v~iwd~~ 180 (393)
...++++.++ .++. ...++.|.+||.. + +.+..+. +|...+..+++ .++++++++... ++.|.+|| .
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~ 107 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-G-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-Q 107 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-S-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-T
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-C-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-C
Confidence 4567777765 4444 4678999999987 4 4555553 34568999999 467766665533 88999999 5
Q ss_pred CCeEEEEEecC--CceEEE--EeCCCEEEEE-cCCeEEEEECCCCceeeec--CCCCcEEEEEEeCC--EEEEEeCCCcE
Q 016224 181 SGQCAGVINLG--GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDLSLS--GPVGQVYAMAVGND--LLFAGTQDGAI 251 (393)
Q Consensus 181 ~~~~~~~~~~~--~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~~~~--~~~~~v~~l~~~~~--~l~~~~~dg~I 251 (393)
+++.+..+... ..+..+ .+++.++++. .++.|.+|+........+. .+...+..++++++ ++++...++.|
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 67777766533 223333 3577777776 4679999997644333332 44567899999987 56666678999
Q ss_pred EEEEeccCCccccCceeec--CceeeEEEEEEc--CCEEEEecCCC-cEEEeeCCCcceeeEeccCcc--ceEEEEEc--
Q 016224 252 LAWKFNVTTNCFEPAASLK--GHSLAVVSLVVG--ANKLYSGSMDN-SIRVWNLETLQCIQTLTEHTS--VVMSLLCW-- 322 (393)
Q Consensus 252 ~vwd~~~~~~~~~~~~~~~--~~~~~v~~l~~~--~~~l~sg~~dg-~i~iwd~~~~~~~~~~~~~~~--~v~~l~~~-- 322 (393)
++||.... .+..+. ++...+..++++ ++++++...++ .|.+||. +++.+..+..+.. .+.+++++
T Consensus 188 ~~~~~~g~-----~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 188 KVFNYEGQ-----YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp EEEETTCC-----EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred EEEcCCCC-----EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCC
Confidence 99997532 222332 223456777775 55777776775 9999995 5677777765433 36788887
Q ss_pred CCEEEEEeCCCcEEEEEcCCC
Q 016224 323 DQFLLSCSLDKTIKVWFATDS 343 (393)
Q Consensus 323 ~~~l~s~s~dg~i~iwd~~~~ 343 (393)
++++++ +.|+.|++|++...
T Consensus 262 g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 262 GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TEEEEE-ETTTEEEEEECSCC
T ss_pred CcEEEE-CCCCeEEEEEcccc
Confidence 445555 67999999998643
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.49 E-value=1.9e-11 Score=111.12 Aligned_cols=230 Identities=9% Similarity=-0.039 Sum_probs=154.4
Q ss_pred EEeeEecCcEEE-ecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 016224 113 LCRNWVQGNCMY-GEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG 191 (393)
Q Consensus 113 ~c~~~~~~~~~~-g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 191 (393)
..+.+..+.++. ...++.|.+||..++ +.+.++. .......|+++++++..++...++.|.+||..+++....+...
T Consensus 47 ~~i~~~~~~lyv~~~~~~~v~viD~~t~-~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 47 QSMVIRDGIGWIVVNNSHVIFAIDINTF-KEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp EEEEEETTEEEEEEGGGTEEEEEETTTC-CEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred eEEEEECCEEEEEEcCCCEEEEEECccc-EEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 445566666664 455789999999998 7777775 4467889999888854444448999999999999988888755
Q ss_pred C------ceEEEE-eCCCEEEEE--cCCeEEEEECCCCceeeecCCCCcEEEEEEeCC-EE-EEEeCC----------Cc
Q 016224 192 G------EVGCMI-SEGPWIFIG--VTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LL-FAGTQD----------GA 250 (393)
Q Consensus 192 ~------~~~~~~-~~~~~l~~~--~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~-~l-~~~~~d----------g~ 250 (393)
. ....+. .++.++++. .++.|.++|+.+++.............+.++++ .+ ++...+ +.
T Consensus 125 ~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 125 DMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp TCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred CccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCce
Confidence 4 332222 444444444 378999999999887633333445577888887 44 443333 78
Q ss_pred EEEEEeccCCccccCceeecCc-eeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeE--eccCccceEEEEEc---
Q 016224 251 ILAWKFNVTTNCFEPAASLKGH-SLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQT--LTEHTSVVMSLLCW--- 322 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~--- 322 (393)
|.++|..+.. ....+... ......++++ +++|+++.. .|.+||+.+++.... +.........++++
T Consensus 205 v~~id~~t~~----v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 205 LYRIDAETFT----VEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp EEEEETTTTE----EEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTT
T ss_pred EEEEECCCCe----EEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCC
Confidence 9999987653 22222211 1245667776 567777654 899999998876421 22223557788886
Q ss_pred CCEEEEE----eCCCcEEEEEcCCCcceEEEEe
Q 016224 323 DQFLLSC----SLDKTIKVWFATDSGNLEVTYT 351 (393)
Q Consensus 323 ~~~l~s~----s~dg~i~iwd~~~~~~~~~~~~ 351 (393)
+.++++. ..++.|.+||.. ++.+..+..
T Consensus 279 g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 279 GEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp CCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred CeEEEEcccccccCCEEEEECCC-CCEEEEEEe
Confidence 3455555 568899999997 666666554
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.48 E-value=3.3e-12 Score=128.23 Aligned_cols=235 Identities=11% Similarity=0.054 Sum_probs=143.7
Q ss_pred CCcCCEEEEEecCCCCEEE-----EEeCCCcEEEEECCCCeEE-EE-EecCC-ceEEEEeCCCEEEEE-cCCe-------
Q 016224 148 GHQKVVSGITLPSGSDKLY-----SGSKDETVRVWDCASGQCA-GV-INLGG-EVGCMISEGPWIFIG-VTNF------- 211 (393)
Q Consensus 148 ~h~~~I~~i~~s~~~~~l~-----s~s~dg~v~iwd~~~~~~~-~~-~~~~~-~~~~~~~~~~~l~~~-~~~~------- 211 (393)
+|...+..++|||||++|| .|+.+.+|++||+.+++.+ .. +.... ....+.++++.|+.+ .+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 4666799999999999998 4444578999999998865 21 11111 345566788877765 4444
Q ss_pred ------EEEEECCCCce---eee--cCCCCcEEEEEEeCC--EEEEEeCCC----cEEEEEeccCCccccCceeecCcee
Q 016224 212 ------VKAWNTQTNTD---LSL--SGPVGQVYAMAVGND--LLFAGTQDG----AILAWKFNVTTNCFEPAASLKGHSL 274 (393)
Q Consensus 212 ------i~v~d~~~~~~---~~~--~~~~~~v~~l~~~~~--~l~~~~~dg----~I~vwd~~~~~~~~~~~~~~~~~~~ 274 (393)
|++|++.++.. +.. ..+...+..+.++++ +|+..+.++ .|.+|+...+ . ...+..+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~----~-~~~l~~~~~ 272 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK----D-FRLLVKGVG 272 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS----S-CEEEEECSS
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC----c-eEEeecCCC
Confidence 99999988762 222 234567889999998 555555444 5555543322 1 222222222
Q ss_pred eEEE-EEEcCCEEEEecC----CCcEEEeeCCCcce--eeEeccC--ccceEEEEEc-CCEEEEEeCCCcEEEEEcC-CC
Q 016224 275 AVVS-LVVGANKLYSGSM----DNSIRVWNLETLQC--IQTLTEH--TSVVMSLLCW-DQFLLSCSLDKTIKVWFAT-DS 343 (393)
Q Consensus 275 ~v~~-l~~~~~~l~sg~~----dg~i~iwd~~~~~~--~~~~~~~--~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~-~~ 343 (393)
.+.. +..+++ |+..+. ++.|.+||+.+++. ...+..+ ...+..+.+. +.++++...|+..+||.+. ++
T Consensus 273 ~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 273 AKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp CCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred ceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 2222 334556 444443 58999999987653 2333333 4457777777 4567788889998888665 23
Q ss_pred cceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe---CCCeEEEEeCCcee
Q 016224 344 GNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC---NDNSVRFYDLPSVI 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s---~dg~I~iwd~~s~~ 391 (393)
+....+. ......+..+.+++++. .++++.+ ..++|++||+.+++
T Consensus 352 ~~~~~l~-~~~~~~v~~~~~s~d~~--~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 352 KPVRTVQ-LPGVGAASNLMGLEDLD--DAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp CEEEECC-CSSSSEECCCBSCTTCS--EEEEEEEETTEEEEEEEEETTTCC
T ss_pred CeeEEec-CCCCeEEEEeecCCCCC--EEEEEEcCCCCCCEEEEEECCCCc
Confidence 3333322 22233455666666432 2343333 35789999998765
No 181
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.47 E-value=4.4e-11 Score=110.72 Aligned_cols=256 Identities=13% Similarity=0.093 Sum_probs=170.3
Q ss_pred eEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceE
Q 016224 116 NWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVG 195 (393)
Q Consensus 116 ~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~ 195 (393)
....+.+++++.++.|..+|..++ +.+................ +..++.++.++.|..+|..+++.+..+.......
T Consensus 100 ~~~~~~v~v~~~~g~l~a~d~~tG-~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 100 TVSGGHVYIGSEKAQVYALNTSDG-TVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp EEETTEEEEEETTSEEEEEETTTC-CEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred eEeCCEEEEEcCCCEEEEEECCCC-CEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 445667888999999999999999 6665555433221111222 4578888999999999999999988887654332
Q ss_pred -------EEEeCCCEEEEEcCCeEEEEECCCCcee-eecCCC--Cc--------E-EEEEEeCCEEEEEeCCCcEEEEEe
Q 016224 196 -------CMISEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPV--GQ--------V-YAMAVGNDLLFAGTQDGAILAWKF 256 (393)
Q Consensus 196 -------~~~~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~~--~~--------v-~~l~~~~~~l~~~~~dg~I~vwd~ 256 (393)
....++.+++...++.+..+|..+++.+ ...... .. + .......+.+++++.++.|..+|.
T Consensus 177 ~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 177 SLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp --CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred eecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 1223444444446789999999998876 222111 00 0 112234558888889999999999
Q ss_pred ccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEecc-CccceEEEEEcCCEEEEEeCCCcE
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTE-HTSVVMSLLCWDQFLLSCSLDKTI 335 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~~~~l~s~s~dg~i 335 (393)
.++...+ ... ......+...++.++.++.++.|..+|..+++.+..... ....+......+..|+.++.+|.|
T Consensus 257 ~tG~~~w----~~~--~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l 330 (376)
T 3q7m_A 257 RSGQIMW----KRE--LGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYL 330 (376)
T ss_dssp TTCCEEE----EEC--CCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEE
T ss_pred CCCcEEe----ecc--CCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeE
Confidence 8874322 221 122345666788999999999999999999998877652 233344455568889999999999
Q ss_pred EEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEe
Q 016224 336 KVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYD 386 (393)
Q Consensus 336 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd 386 (393)
.++|..+++.+......... +....... . + .|+.++.+|.|+.|+
T Consensus 331 ~~~d~~tG~~~~~~~~~~~~--~~~~~~~~-~--~-~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 331 HWINVEDGRFVAQQKVDSSG--FQTEPVAA-D--G-KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEETTTCCEEEEEECCTTC--BCSCCEEE-T--T-EEEEEBTTSCEEEEE
T ss_pred EEEECCCCcEEEEEecCCCc--ceeCCEEE-C--C-EEEEEeCCCEEEEEe
Confidence 99999888766555432221 11100011 2 2 688899999999987
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.47 E-value=6.1e-11 Score=119.32 Aligned_cols=236 Identities=8% Similarity=0.019 Sum_probs=152.8
Q ss_pred CcCCEEEEEecCCCCEEEEEeCCC-----cEEEEECCCCeEEEEEecC--CceEEEEeCCCEEEEE-cCCe---------
Q 016224 149 HQKVVSGITLPSGSDKLYSGSKDE-----TVRVWDCASGQCAGVINLG--GEVGCMISEGPWIFIG-VTNF--------- 211 (393)
Q Consensus 149 h~~~I~~i~~s~~~~~l~s~s~dg-----~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~-~~~~--------- 211 (393)
|...+..++|||||++||.++.++ +|++||+.+++.+...... .....+.++++.|+.+ .++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 545789999999999998776543 8999999999877643222 2235566788877765 4433
Q ss_pred -------EEEEECCCCce---eeecC--CCCcEEEEEEeCC--EEEEEeC-----CCcEEEEEecc------CCccccCc
Q 016224 212 -------VKAWNTQTNTD---LSLSG--PVGQVYAMAVGND--LLFAGTQ-----DGAILAWKFNV------TTNCFEPA 266 (393)
Q Consensus 212 -------i~v~d~~~~~~---~~~~~--~~~~v~~l~~~~~--~l~~~~~-----dg~I~vwd~~~------~~~~~~~~ 266 (393)
|++|++.++.. +.... +...+..+.|+++ +|+..+. +..|++||+.. +.. ..
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---~~ 279 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL---KW 279 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC---CC
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc---ce
Confidence 99999988762 22222 4556889999998 5555543 56899999986 321 12
Q ss_pred eeecCceee-EEEEEEcCCEEEEecCC----CcEEEeeCCCcc--eeeEeccCcc--ceEEEEEc-CC-EEEEEeCCCc-
Q 016224 267 ASLKGHSLA-VVSLVVGANKLYSGSMD----NSIRVWNLETLQ--CIQTLTEHTS--VVMSLLCW-DQ-FLLSCSLDKT- 334 (393)
Q Consensus 267 ~~~~~~~~~-v~~l~~~~~~l~sg~~d----g~i~iwd~~~~~--~~~~~~~~~~--~v~~l~~~-~~-~l~s~s~dg~- 334 (393)
..+..+... ...+..+++.|+..+.. +.|.+||+.++. ....+..|.. .+..+.+. ++ ++++...|+.
T Consensus 280 ~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 280 VKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp EEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred EEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEE
Confidence 333333322 23455677876655543 369999998764 2355555544 57778887 44 6677777875
Q ss_pred -EEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC---CCeEEEEeCCcee
Q 016224 335 -IKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN---DNSVRFYDLPSVI 391 (393)
Q Consensus 335 -i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~---dg~I~iwd~~s~~ 391 (393)
|.+|++.+++.+..+..+ ...+..+.++|++. .++++.+. .++|++||+.+++
T Consensus 360 ~l~~~~~~~g~~~~~l~~~--~~~v~~~~~s~d~~--~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLE--VGSVVGYSGQKKDT--EIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTTCCEEEEECCC--SSEEEEEECCTTCS--EEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCCCCEEEecCCC--CceEEEEecCCCCC--EEEEEEeCCCCCCEEEEEECCCCc
Confidence 566676556555554443 34567777776542 34444333 5789999998765
No 183
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.47 E-value=3.7e-10 Score=104.34 Aligned_cols=252 Identities=10% Similarity=-0.020 Sum_probs=161.2
Q ss_pred eEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEecC--------
Q 016224 130 FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS----------KDETVRVWDCASGQCAGVINLG-------- 191 (393)
Q Consensus 130 ~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s----------~dg~v~iwd~~~~~~~~~~~~~-------- 191 (393)
.|.++|..++ +.+.++.....+ .++++||+++|+.+. .++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D~~t~-~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g 124 (373)
T 2mad_H 48 QQWVLDAGSG-SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVG 124 (373)
T ss_pred EEEEEECCCC-eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccC
Confidence 7899999998 788888765555 899999999999886 3678999999999888887654
Q ss_pred --CceEEEEeCCCEEEEEc---CCeEEEEECCCCceeee-cCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccC
Q 016224 192 --GEVGCMISEGPWIFIGV---TNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEP 265 (393)
Q Consensus 192 --~~~~~~~~~~~~l~~~~---~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~ 265 (393)
.....+.+++++|+++. ++.|.++| .+++.... ......+......+..+++.+.||.+.++|. .+......
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~ 202 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAG 202 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEE
Confidence 11234567999988763 46899999 99887744 4433333222223337777889999999999 55321000
Q ss_pred c--eeecCceeeE-E--EEEEcCCEEEEecCCCcEEEeeCCCcc--eeeEeccC----------ccceEEEEEc--CCEE
Q 016224 266 A--ASLKGHSLAV-V--SLVVGANKLYSGSMDNSIRVWNLETLQ--CIQTLTEH----------TSVVMSLLCW--DQFL 326 (393)
Q Consensus 266 ~--~~~~~~~~~v-~--~l~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~----------~~~v~~l~~~--~~~l 326 (393)
. ..+ .....+ . .+..++..++..+..+.+.+.|+.+.. .+..+... ......+.++ ++.+
T Consensus 203 ~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~l 281 (373)
T 2mad_H 203 LVGAML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI 281 (373)
T ss_pred eccccc-cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEE
Confidence 0 000 111111 1 122334443433467899999997542 23333211 1112224444 5555
Q ss_pred EEEeC----------CCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe-CCCeEEEEeCCceee
Q 016224 327 LSCSL----------DKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC-NDNSVRFYDLPSVII 392 (393)
Q Consensus 327 ~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s-~dg~I~iwd~~s~~l 392 (393)
+++.. ++.|.++|+.+.+.+..+.... ....+.++|++ +.+++++. .++.|.+||+.++++
T Consensus 282 yV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg--~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 282 YLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDG--GPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCC--CeEEEEEcCCCCeEEEEECCCCCE
Confidence 55432 3579999998887766664322 36778887763 32566666 589999999998875
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.46 E-value=1.1e-10 Score=105.88 Aligned_cols=255 Identities=9% Similarity=0.013 Sum_probs=159.5
Q ss_pred ceEEeeEecCc--EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 111 DILCRNWVQGN--CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
.+.++.|+++. ++....++.++.| .+ +....+..+...+.+++|++++++++++..++.|.+||..+++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TA-EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---EC-EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred ccceeeecCCccceeEEeecccCccc---cc-ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 35556666553 2334667788888 33 566677778888899999999998888888999999999988766554
Q ss_pred -ecCCceEEEE--eCCCEEEEEcC-----CeEEEEECCCCceee-ec--CCCCcEEEEEEeCC-EEEEEeC-------CC
Q 016224 189 -NLGGEVGCMI--SEGPWIFIGVT-----NFVKAWNTQTNTDLS-LS--GPVGQVYAMAVGND-LLFAGTQ-------DG 249 (393)
Q Consensus 189 -~~~~~~~~~~--~~~~~l~~~~~-----~~i~v~d~~~~~~~~-~~--~~~~~v~~l~~~~~-~l~~~~~-------dg 249 (393)
.....+..+. ++++++++... +.|.+||..++.... +. .....+..+.++++ .++.++. .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 2334444443 57777777644 489999998877542 22 24457899999988 3444433 24
Q ss_pred cEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEE-EEecCCCcEEEeeCCC-cceeeE--------eccCccceE
Q 016224 250 AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKL-YSGSMDNSIRVWNLET-LQCIQT--------LTEHTSVVM 317 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~sg~~dg~i~iwd~~~-~~~~~~--------~~~~~~~v~ 317 (393)
.|..+|..... ...+......+..++++ ++.| ++.+.++.|.+||+.+ ++.+.. +..+ ..+.
T Consensus 163 ~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 163 GVYYVSPDFRT-----VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp EEEEECTTSCC-----EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred eEEEEeCCCCE-----EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 45555443321 11122222345667775 4555 4555688999999964 333322 1222 3567
Q ss_pred EEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecC----CccEEEEEeeeCCCCCcEEEEEeCC
Q 016224 318 SLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNE----EHGVLALCGMPDSEGKPVLLCSCND 379 (393)
Q Consensus 318 ~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~l~s~s~d 379 (393)
.++++ ++++++...++.|.+||. +++.+..+..... ...+..++|.++. + .|+.++.+
T Consensus 237 ~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg--~-~L~v~~~~ 300 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGT--N-QLIICSND 300 (333)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTS--C-EEEEEEEC
T ss_pred ceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCC--C-EEEEEeCc
Confidence 78887 567777777899999998 4554444433221 0146778887653 2 45544444
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.45 E-value=2.9e-09 Score=94.57 Aligned_cols=266 Identities=10% Similarity=0.024 Sum_probs=167.3
Q ss_pred ceEEeeEecC-cEEEecC-CCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 111 DILCRNWVQG-NCMYGEK-CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 111 ~i~c~~~~~~-~~~~g~~-dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
.+.++++.++ .++.+.. ++.|.+||.. +......+..+...+.+|++++++.++++...++.|..||.. ++. ..+
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~ 92 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEY 92 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEE
Confidence 5678888765 4555554 7899999988 522222333456789999999999988877778899999986 433 333
Q ss_pred ec---CCceEEEE--eCCCEEEEE-cCCeEEEEECCCCceee--ecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEecc
Q 016224 189 NL---GGEVGCMI--SEGPWIFIG-VTNFVKAWNTQTNTDLS--LSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNV 258 (393)
Q Consensus 189 ~~---~~~~~~~~--~~~~~l~~~-~~~~i~v~d~~~~~~~~--~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~ 258 (393)
.. ...+..+. +++.+.++. .++.|..||. +++... .......+..++++++ ++++...++.|..||. +
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 170 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S 170 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C
Confidence 32 22333333 467776666 4679999998 555442 2334567899999887 5555556789999988 4
Q ss_pred CCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeE-eccCccceEEEEEc--CCEEEEEeCCC
Q 016224 259 TTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQT-LTEHTSVVMSLLCW--DQFLLSCSLDK 333 (393)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~--~~~l~s~s~dg 333 (393)
+.. . ..........+..++++ ++++++...++.|.+||. +++.... +..+...+.++.++ +.++++...++
T Consensus 171 g~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 246 (299)
T 2z2n_A 171 GDI--T-EFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGAN 246 (299)
T ss_dssp CCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred CcE--E-EeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCc
Confidence 321 1 11122233456677776 456666666889999999 6664332 23345678888887 45555555778
Q ss_pred cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 334 TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 334 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
.|.+||. ++ .+..+........+..+.+ +++. +.++.. .+.|..++..+.++
T Consensus 247 ~i~~~d~-~g-~~~~~~~~~~~~~~~~i~~-~~g~---l~v~~~-~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 247 KIGRLTS-NN-IIEEYPIQIKSAEPHGICF-DGET---IWFAME-CDKIGKLTLIKDNM 298 (299)
T ss_dssp EEEEEET-TT-EEEEEECSSSSCCEEEEEE-CSSC---EEEEET-TTEEEEEEEC----
T ss_pred eEEEECC-CC-ceEEEeCCCCCCccceEEe-cCCC---EEEEec-CCcEEEEEcCcccC
Confidence 9999998 33 3333322222345777777 5433 444444 67788888887654
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=4.7e-11 Score=105.68 Aligned_cols=200 Identities=11% Similarity=0.062 Sum_probs=139.7
Q ss_pred cCc-EEEecCCCeEEEEECCCCcEEEEEecCCc-CCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCC--ce
Q 016224 119 QGN-CMYGEKCKFLHSWTVGDGFKLLTQLEGHQ-KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGG--EV 194 (393)
Q Consensus 119 ~~~-~~~g~~dg~i~vwd~~~~~~~~~~l~~h~-~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~--~~ 194 (393)
+++ +++++.++.|++||.+++ +.+.++..+. ..+.+++++|+|++|+ +.++.|..||. +++.+..+..+. .+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG-~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK-EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT-EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC-eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 444 456889999999999999 8888888776 5789999999999888 45788999999 899999988753 33
Q ss_pred E--EEEeCCCEEEEEc--CCeEEEEECCCCcee-eec------CCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCc
Q 016224 195 G--CMISEGPWIFIGV--TNFVKAWNTQTNTDL-SLS------GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTN 261 (393)
Q Consensus 195 ~--~~~~~~~~l~~~~--~~~i~v~d~~~~~~~-~~~------~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~ 261 (393)
. ...++++++++.. .+.|..++. +++.+ .+. .+......+.+.++ ++++...++.|.+||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 2 2346888888864 457777776 44443 221 11123334455555 88888999999999987 532
Q ss_pred cccCceeecCceeeEEEEE--EcCCEEEEecCCCcEEEeeCCCcceeeEeccCc------cceEEEEEc--CCEEEEE
Q 016224 262 CFEPAASLKGHSLAVVSLV--VGANKLYSGSMDNSIRVWNLETLQCIQTLTEHT------SVVMSLLCW--DQFLLSC 329 (393)
Q Consensus 262 ~~~~~~~~~~~~~~v~~l~--~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~l~~~--~~~l~s~ 329 (393)
+..+.... ...++. .+++.++++..++.|..+|..+++.+.++..+. ..+..+... +..+++.
T Consensus 158 ----~w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 158 ----LNSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ----EEEEECSS-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred ----EEEEECCC-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 33333221 122222 357788888888899999999999999886432 124555554 5555555
No 187
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.45 E-value=2e-10 Score=105.35 Aligned_cols=257 Identities=11% Similarity=0.055 Sum_probs=165.3
Q ss_pred CCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEecCC-----
Q 016224 128 CKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS----------KDETVRVWDCASGQCAGVINLGG----- 192 (393)
Q Consensus 128 dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s----------~dg~v~iwd~~~~~~~~~~~~~~----- 192 (393)
++.|.+.|..+. +.+.++..-..+ . ++++||+++|+++. .++.|.+||..+.+.+..+..+.
T Consensus 58 ~~~V~ViD~~t~-~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~ 134 (386)
T 3sjl_D 58 VTQQFVIDGEAG-RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL 134 (386)
T ss_dssp SEEEEEEETTTT-EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CCEEEEEECCCC-eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc
Confidence 579999999998 888888755555 4 99999999998876 36789999999999999887542
Q ss_pred -----ceEEEEeCCCEEEEEc---CCeEEEEECCCCceeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCcccc
Q 016224 193 -----EVGCMISEGPWIFIGV---TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFE 264 (393)
Q Consensus 193 -----~~~~~~~~~~~l~~~~---~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~ 264 (393)
....+.+++++++++. ++.|.++|+.+++.+....-.+...........+++.+.||++.+.++........
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEE
Confidence 2355668999888763 57999999999998733222222111112334777888999999999876321100
Q ss_pred -CceeecCceeeEE-EEEEc--CCEEEEecCCCcEEEeeCCCcc--eeeEecc----------CccceEEEEEc--CCEE
Q 016224 265 -PAASLKGHSLAVV-SLVVG--ANKLYSGSMDNSIRVWNLETLQ--CIQTLTE----------HTSVVMSLLCW--DQFL 326 (393)
Q Consensus 265 -~~~~~~~~~~~v~-~l~~~--~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~----------~~~~v~~l~~~--~~~l 326 (393)
....+......+. ...+. ...++..+.+|.|.+.|+.+.. .+..+.. .......+.++ ++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred eecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 0000110111111 12332 2344445568999999997653 3333320 01112223444 5555
Q ss_pred EEEeC----------CCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEE-eCCCeEEEEeCCceee
Q 016224 327 LSCSL----------DKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCS-CNDNSVRFYDLPSVII 392 (393)
Q Consensus 327 ~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~-s~dg~I~iwd~~s~~l 392 (393)
+.... ...|.++|+.+.+.+..+.... ....+.++++. +++|++. ..++.|.++|..++++
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~~~lavs~D~--~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDSINVSQDE--KPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECSSS--SCEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC---CcceEEECCCC--CeEEEEEcCCCCeEEEEECCCCcE
Confidence 55432 2579999999888777766543 36678888775 2255554 5589999999999875
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=9.3e-11 Score=104.73 Aligned_cols=222 Identities=11% Similarity=0.017 Sum_probs=151.5
Q ss_pred ceEEeeEecCc---EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 016224 111 DILCRNWVQGN---CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGV 187 (393)
Q Consensus 111 ~i~c~~~~~~~---~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 187 (393)
...+..|++++ ++++..++.|+.|+..++ ...+..+...+.+++++++++++++...++.|.+||..+++....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESI 105 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEE
Confidence 45678888764 446788999999998876 455666788899999999999888777778999999988876544
Q ss_pred EecCC-------ceEEEEeCCCEEEEE----c--------------CCeEEEEECCCCceeeecCCCCcEEEEEEeCC--
Q 016224 188 INLGG-------EVGCMISEGPWIFIG----V--------------TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-- 240 (393)
Q Consensus 188 ~~~~~-------~~~~~~~~~~~l~~~----~--------------~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~-- 240 (393)
..... ....+.+++.++++. . .+.|..++.. ++...+..+......++|+++
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~ 184 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGN 184 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSC
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCC
Confidence 32211 113344678877762 2 2466666666 555555666777899999988
Q ss_pred EEEEEeCCCcEEEEEeccCCccc-cCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceE
Q 016224 241 LLFAGTQDGAILAWKFNVTTNCF-EPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVM 317 (393)
Q Consensus 241 ~l~~~~~dg~I~vwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 317 (393)
.|++.+.++.|.+|++..... . .....+..+...+..++++ ++++++. ++.|.+||.. ++.+..+..+.. +.
T Consensus 185 ~lv~~~~~~~i~~~~~~~~g~-~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~ 259 (296)
T 3e5z_A 185 LLVSDTGDNATHRYCLNARGE-TEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TS 259 (296)
T ss_dssp EEEEETTTTEEEEEEECSSSC-EEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CC
T ss_pred EEEEeCCCCeEEEEEECCCCc-CcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ce
Confidence 567777889999999972211 1 0011112233334456665 5544444 8899999986 788888887777 88
Q ss_pred EEEEc---CCEEEEEeCCCcEEEEEcCC
Q 016224 318 SLLCW---DQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 318 ~l~~~---~~~l~s~s~dg~i~iwd~~~ 342 (393)
+++|. ++.|++++.+ .+.-++..+
T Consensus 260 ~~~f~~~d~~~L~v~t~~-~l~~~~~~~ 286 (296)
T 3e5z_A 260 NLCFGGPEGRTLYMTVST-EFWSIETNV 286 (296)
T ss_dssp EEEEESTTSCEEEEEETT-EEEEEECSC
T ss_pred eEEEECCCCCEEEEEcCC-eEEEEEccc
Confidence 88884 3578877766 344445543
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.40 E-value=8e-10 Score=107.48 Aligned_cols=277 Identities=7% Similarity=-0.007 Sum_probs=178.7
Q ss_pred ceEEeeEecCc--EEEecCCCeEEEEECC--CCcEEEEEecCCcCCEEEEEec----CCCCEEEEEeC-CCcEEEEECCC
Q 016224 111 DILCRNWVQGN--CMYGEKCKFLHSWTVG--DGFKLLTQLEGHQKVVSGITLP----SGSDKLYSGSK-DETVRVWDCAS 181 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~dg~i~vwd~~--~~~~~~~~l~~h~~~I~~i~~s----~~~~~l~s~s~-dg~v~iwd~~~ 181 (393)
....+.+++++ +++++.++.|.+||+. +. +.+.++.... ....++|+ |||++++++.. +++|.|+|..+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 44578888774 4568889999999995 66 7777777544 45789999 69998887765 59999999999
Q ss_pred CeEEEEEecCC------------ceEEEE--eCCCEEEEE--cCCeEEEEECCCCcee--eecCCCCcEEEEEEeCC--E
Q 016224 182 GQCAGVINLGG------------EVGCMI--SEGPWIFIG--VTNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND--L 241 (393)
Q Consensus 182 ~~~~~~~~~~~------------~~~~~~--~~~~~l~~~--~~~~i~v~d~~~~~~~--~~~~~~~~v~~l~~~~~--~ 241 (393)
.+.+..+.... .+..+. .++..+++. ..+.|.++|....+.+ ...........+.|+++ +
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY 355 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCE
Confidence 99988876432 222222 344444443 5679999998876433 22233456778889987 4
Q ss_pred E-EEEeCCCcEEEEEeccCCccccCce-eecCcee-eEEEEEEcCCE-EEEec-CCCcEEEeeCCC-------cceeeEe
Q 016224 242 L-FAGTQDGAILAWKFNVTTNCFEPAA-SLKGHSL-AVVSLVVGANK-LYSGS-MDNSIRVWNLET-------LQCIQTL 309 (393)
Q Consensus 242 l-~~~~~dg~I~vwd~~~~~~~~~~~~-~~~~~~~-~v~~l~~~~~~-l~sg~-~dg~i~iwd~~~-------~~~~~~~ 309 (393)
| ++...++.|.++|+.+......... ....|.. .+.-+..++.. ++++. .++.|.++|..+ .+.++++
T Consensus 356 ~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 356 FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE
Confidence 4 4555789999999987642111100 1122432 22222333343 44443 568999999987 6778887
Q ss_pred ccCccceEEEEEc--CCEEEEEeC-------CCcEEEEEcCCC-----cce-EEEEee------cCCccEEEEEeeeCCC
Q 016224 310 TEHTSVVMSLLCW--DQFLLSCSL-------DKTIKVWFATDS-----GNL-EVTYTH------NEEHGVLALCGMPDSE 368 (393)
Q Consensus 310 ~~~~~~v~~l~~~--~~~l~s~s~-------dg~i~iwd~~~~-----~~~-~~~~~~------~~~~~v~~~~~~~~~~ 368 (393)
......-.-+..+ +++|.+... ..+|.++|+.+. ... ..+... .....+..+.|++++.
T Consensus 436 ~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 515 (567)
T 1qks_A 436 PALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGT 515 (567)
T ss_dssp ECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSS
T ss_pred ecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCC
Confidence 7543322223334 667777653 459999999866 222 233210 1234578888888755
Q ss_pred CCcEEEEEe-----CCCeEEEEeCCceee
Q 016224 369 GKPVLLCSC-----NDNSVRFYDLPSVII 392 (393)
Q Consensus 369 ~~~~l~s~s-----~dg~I~iwd~~s~~l 392 (393)
.+..+. .++.|.|+|..++++
T Consensus 516 ---~~~~s~~~~~~~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 516 ---EVWFSVWNGKDQESALVVVDDKTLEL 541 (567)
T ss_dssp ---EEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred ---EEEEEeecCCCCCCcEEEEECCCceE
Confidence 454442 379999999999876
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.40 E-value=1.5e-10 Score=105.55 Aligned_cols=215 Identities=9% Similarity=0.041 Sum_probs=137.3
Q ss_pred cceEEeeEecCc--EEEecCC---C--eEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCC-----------
Q 016224 110 TDILCRNWVQGN--CMYGEKC---K--FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD----------- 171 (393)
Q Consensus 110 ~~i~c~~~~~~~--~~~g~~d---g--~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d----------- 171 (393)
..+....|++++ +++.+.+ + .|.+|++.++ +.......+ . +..++|+||++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-SSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT-EEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC-ceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 457788999875 4444322 3 4888898887 554444433 3 9999999999999888642
Q ss_pred ----------------CcEEEEECCCCeEEEEEec-CCceEEEEeCCCEEEEEc-C---------CeEEEEECCCCceee
Q 016224 172 ----------------ETVRVWDCASGQCAGVINL-GGEVGCMISEGPWIFIGV-T---------NFVKAWNTQTNTDLS 224 (393)
Q Consensus 172 ----------------g~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~-~---------~~i~v~d~~~~~~~~ 224 (393)
..|.+||+.+++.+..+.. ......+.+++ +++++. + ..|.+++ +++...
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 212 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEK 212 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEE
Confidence 5799999999887343332 22233455677 776652 2 1455555 555544
Q ss_pred ecCCCCcEEEEEEeCC--EEEEEeCC--------CcEEEEEeccCCccccCceeecCceeeEEE-EEEcCCEEEEecCCC
Q 016224 225 LSGPVGQVYAMAVGND--LLFAGTQD--------GAILAWKFNVTTNCFEPAASLKGHSLAVVS-LVVGANKLYSGSMDN 293 (393)
Q Consensus 225 ~~~~~~~v~~l~~~~~--~l~~~~~d--------g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~-l~~~~~~l~sg~~dg 293 (393)
+..+ ..+..+ +|+ .|+..+.+ ..|.+|| .+ +.......+...+.. +.|+..++++++.++
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~----~~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~ 283 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK----EVMGILDEVDRGVGQAKIKDGKVYFTLFEEG 283 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS----CEEESSTTCCSEEEEEEEETTEEEEEEEETT
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC----ceEeccccCCcccCCccEEcCcEEEEEecCC
Confidence 4444 555555 555 56655543 3677777 32 222223345556664 667523788888999
Q ss_pred cEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEEeCCCcE-EEEEcC
Q 016224 294 SIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTI-KVWFAT 341 (393)
Q Consensus 294 ~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~dg~i-~iwd~~ 341 (393)
.++|| +.+++.. .+..+...|.++.+++.++++++.++.. .||.+.
T Consensus 284 ~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 284 SVNLY-IWDGEIK-PIAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEE-EESSSEE-EEECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred cEEEE-EcCCceE-EEecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 99999 8766654 4444577888999888666677777665 777775
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.40 E-value=1.3e-10 Score=102.78 Aligned_cols=208 Identities=12% Similarity=0.089 Sum_probs=139.8
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEecCC----ceEEEEeCCCEEEEEcCCeEEEEECCCCcee-eecCC-CCcEEE
Q 016224 161 GSDKLYSGSKDETVRVWDCASGQCAGVINLGG----EVGCMISEGPWIFIGVTNFVKAWNTQTNTDL-SLSGP-VGQVYA 234 (393)
Q Consensus 161 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~-~~~v~~ 234 (393)
.+++|++++.|+.|.+||.++++.+..+..+. ....+.+++++++ +.++.|..||. +++.+ .+..+ ...+.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 45789999999999999999999999998753 2344557888888 66788999999 67666 55543 357888
Q ss_pred EEEeCC--EEEEEeC-CCcEEEEEeccCCccccCc--eeecCceeeE--EEEEEcCCEEEEecCCCcEEEeeCCCcceee
Q 016224 235 MAVGND--LLFAGTQ-DGAILAWKFNVTTNCFEPA--ASLKGHSLAV--VSLVVGANKLYSGSMDNSIRVWNLETLQCIQ 307 (393)
Q Consensus 235 l~~~~~--~l~~~~~-dg~I~vwd~~~~~~~~~~~--~~~~~~~~~v--~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 307 (393)
+.+.++ ++++.+. ++.|..+|.. ++...+.. .....+.... ..+..+++++++...++.|..||.. ++.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 888887 6777666 6777777642 22111100 0001111111 2334468899999999999999998 99999
Q ss_pred EeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCC----ccEEEEEeeeCCCCCcEEEEE
Q 016224 308 TLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEE----HGVLALCGMPDSEGKPVLLCS 376 (393)
Q Consensus 308 ~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~l~s~ 376 (393)
++.....+ .++... ++.+++++.+++|..+|..+++.+..+...... ..+..+...++ +.++++.
T Consensus 160 ~~~~~~~~-~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~---G~i~v~~ 230 (276)
T 3no2_A 160 SVKLSGTP-FSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN---GGLYICN 230 (276)
T ss_dssp EEECSSCC-CEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT---SCEEEEE
T ss_pred EEECCCCc-cceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC---CCEEEEe
Confidence 98765433 334443 678888888889999999888877776543211 12444444443 3366665
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.39 E-value=8.2e-12 Score=115.99 Aligned_cols=244 Identities=8% Similarity=-0.055 Sum_probs=149.7
Q ss_pred EEECCCCcEEEEEecCCcCC-----EEEEEecCCCCEEEEEeCC---CcEEEEECCCCeEEEEEecCCce---EEEEeCC
Q 016224 133 SWTVGDGFKLLTQLEGHQKV-----VSGITLPSGSDKLYSGSKD---ETVRVWDCASGQCAGVINLGGEV---GCMISEG 201 (393)
Q Consensus 133 vwd~~~~~~~~~~l~~h~~~-----I~~i~~s~~~~~l~s~s~d---g~v~iwd~~~~~~~~~~~~~~~~---~~~~~~~ 201 (393)
.+|..++ +.+..+..+... +..++|+|||++|+..... ..|.+||+.+++........... ..+.+++
T Consensus 14 ~~d~~~g-~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 14 FVDSDTQ-VKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp EECTTTC-CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS
T ss_pred eecCCCC-cceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC
Confidence 4466777 566777666444 6778999999998877553 37888999988765544333221 3456788
Q ss_pred CEEEE-EcCCeEEEEECCCCceeeecC-CCCcEEE---E----------------EEeCC--EEEEE-----eCCCcEEE
Q 016224 202 PWIFI-GVTNFVKAWNTQTNTDLSLSG-PVGQVYA---M----------------AVGND--LLFAG-----TQDGAILA 253 (393)
Q Consensus 202 ~~l~~-~~~~~i~v~d~~~~~~~~~~~-~~~~v~~---l----------------~~~~~--~l~~~-----~~dg~I~v 253 (393)
+.|+. +.++.|.+|++.+++...+.. +...... + .++|+ .++.. ..+..|++
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 88765 566789999999887653332 3322212 1 23333 22221 35567899
Q ss_pred EEeccCCccccCceeecCceeeEEEEEEcC---CEEEEecCC------CcEEEeeCCCcceeeEeccC--ccceEEEEEc
Q 016224 254 WKFNVTTNCFEPAASLKGHSLAVVSLVVGA---NKLYSGSMD------NSIRVWNLETLQCIQTLTEH--TSVVMSLLCW 322 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~--~~~v~~l~~~ 322 (393)
||+.++.. ..+..+...+..+.|++ +.|+..+.+ ..|.+||+..++.. .+..+ ...+..+.|+
T Consensus 173 ~d~~~g~~-----~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 173 VDIETGEL-----EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWI 246 (396)
T ss_dssp EETTTCCE-----EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEEC
T ss_pred EECCCCcE-----EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEEC
Confidence 99877532 12223445566667654 445554433 46899998765533 33333 2357778887
Q ss_pred --CCEEEEEeCC-----CcEEEEEcCCCcceEEEEeecCCccEEEEEeee-CCCCCcEEEEEe----------------C
Q 016224 323 --DQFLLSCSLD-----KTIKVWFATDSGNLEVTYTHNEEHGVLALCGMP-DSEGKPVLLCSC----------------N 378 (393)
Q Consensus 323 --~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~s~s----------------~ 378 (393)
+++|+.++.+ +.|++||+.+++... +..... .. +.|+| ++. +|++++ .
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~---~~-~~~s~~dg~---~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMPP---CS-HLMSNFDGS---LMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECCS---EE-EEEECSSSS---EEEEEECCC----------CCCC
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCCC---CC-CCccCCCCc---eEEEecCCcceeeccccccccCC
Confidence 5666666543 449999997665432 222211 22 77877 654 676654 3
Q ss_pred CCeEEEEeCCcee
Q 016224 379 DNSVRFYDLPSVI 391 (393)
Q Consensus 379 dg~I~iwd~~s~~ 391 (393)
+..|++||+.+++
T Consensus 319 ~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 319 DPFLYVLNTKAKS 331 (396)
T ss_dssp CCEEEEEETTTTB
T ss_pred CCcEEEEecccCc
Confidence 4789999998764
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.38 E-value=1.5e-10 Score=117.07 Aligned_cols=237 Identities=12% Similarity=-0.006 Sum_probs=146.8
Q ss_pred CcCCEEEEEecCCCCEEEEEeCC-----CcEEEEECCCCeEEEEEecCC--ceEEEEeCCCEEEEE-cCC----------
Q 016224 149 HQKVVSGITLPSGSDKLYSGSKD-----ETVRVWDCASGQCAGVINLGG--EVGCMISEGPWIFIG-VTN---------- 210 (393)
Q Consensus 149 h~~~I~~i~~s~~~~~l~s~s~d-----g~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~-~~~---------- 210 (393)
|...+..++|||||++||.++.+ .+|++||+.+++.+....... ....+.++ +.|+.+ .+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 44578899999999999887654 469999999998765421111 12344567 766654 333
Q ss_pred ----eEEEEECCCCce---eeecC--CCCcEEEEEEeCC--EEEEEeCC-----CcEEEEEeccCCccccCceeecCce-
Q 016224 211 ----FVKAWNTQTNTD---LSLSG--PVGQVYAMAVGND--LLFAGTQD-----GAILAWKFNVTTNCFEPAASLKGHS- 273 (393)
Q Consensus 211 ----~i~v~d~~~~~~---~~~~~--~~~~v~~l~~~~~--~l~~~~~d-----g~I~vwd~~~~~~~~~~~~~~~~~~- 273 (393)
.|++|++.++.. +.... +...+..+.|+++ +|+..+.+ ..|++||+.++... ....+..+.
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~l~~~~~ 317 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG--PVTALIPDLK 317 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC--CCEEEECSSS
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc--ccEEecCCCC
Confidence 489999987652 22322 3335889999998 56655543 38999999865211 012222222
Q ss_pred eeEEEEEEcCCEEEEecC----CCcEEEeeCCCc--ceeeEeccCccceEEEEEcC-CEEEEEeCCCcEEEEEcC-CCcc
Q 016224 274 LAVVSLVVGANKLYSGSM----DNSIRVWNLETL--QCIQTLTEHTSVVMSLLCWD-QFLLSCSLDKTIKVWFAT-DSGN 345 (393)
Q Consensus 274 ~~v~~l~~~~~~l~sg~~----dg~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~-~~l~s~s~dg~i~iwd~~-~~~~ 345 (393)
.....+..+++.|+..+. ++.|.+||+.++ +....+..+...+..+.+.+ .++++...|+..+||.+. +++.
T Consensus 318 ~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 318 AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCE
T ss_pred ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCc
Confidence 223334567887776665 345999999874 33344444555566777774 467778889988877654 3333
Q ss_pred eEEEEeecCCccEEEEEeeeCCCCCcEEEEEe---CCCeEEEEeCCcee
Q 016224 346 LEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC---NDNSVRFYDLPSVI 391 (393)
Q Consensus 346 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s---~dg~I~iwd~~s~~ 391 (393)
...+. ......+..+.++++++ .++++.+ ..++|++||+.+++
T Consensus 398 ~~~l~-~~~~~~v~~~~~s~d~~--~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 398 AGAVS-LPGIGSASGLSGRPGDR--HAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEECB-CSSSCEEEEEECCBTCS--CEEEEEEETTEEEEEEEEETTTTE
T ss_pred eeecc-CCCCeEEEEeecCCCCC--EEEEEEcCCCCCCEEEEEECCCCc
Confidence 33322 22234577788877643 2444433 35789999998765
No 194
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.38 E-value=2e-11 Score=121.69 Aligned_cols=237 Identities=6% Similarity=-0.045 Sum_probs=153.4
Q ss_pred EecCCcCCEEEEEecCCCCEEEEE--eCCCcEEEEECCCCeEEEEEecCC-ce-----------EEEE--eCCCE-EEEE
Q 016224 145 QLEGHQKVVSGITLPSGSDKLYSG--SKDETVRVWDCASGQCAGVINLGG-EV-----------GCMI--SEGPW-IFIG 207 (393)
Q Consensus 145 ~l~~h~~~I~~i~~s~~~~~l~s~--s~dg~v~iwd~~~~~~~~~~~~~~-~~-----------~~~~--~~~~~-l~~~ 207 (393)
.+.+|...|..++|+++.-++++. +.++...||....+.....+.... .+ ..+. ++++. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 456788999999999887667776 568899999954444344443222 21 2233 67887 7766
Q ss_pred cC--CeEEEEECC--C-CceeeecC-----CCCcEEEEEEeCC--EEEEEeCC----------CcEEEEEecc------C
Q 016224 208 VT--NFVKAWNTQ--T-NTDLSLSG-----PVGQVYAMAVGND--LLFAGTQD----------GAILAWKFNV------T 259 (393)
Q Consensus 208 ~~--~~i~v~d~~--~-~~~~~~~~-----~~~~v~~l~~~~~--~l~~~~~d----------g~I~vwd~~~------~ 259 (393)
.+ ..|.++++. + +....+.. +...+..++|+|+ .|++++.+ ..|++||+.. +
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred ECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence 44 467777776 3 55555555 5678899999998 77777766 5799999887 3
Q ss_pred CccccCceeec-CceeeEEEEEE--cCCEEEEecCC--------CcEEEeeCC-Cc---ceeeEeccCccceEEEEEc--
Q 016224 260 TNCFEPAASLK-GHSLAVVSLVV--GANKLYSGSMD--------NSIRVWNLE-TL---QCIQTLTEHTSVVMSLLCW-- 322 (393)
Q Consensus 260 ~~~~~~~~~~~-~~~~~v~~l~~--~~~~l~sg~~d--------g~i~iwd~~-~~---~~~~~~~~~~~~v~~l~~~-- 322 (393)
. . ..+. .+...+..++| ++++|+..+.+ ..|++||+. ++ +.......|...+..+.|+
T Consensus 178 ~----~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 178 A----V-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp G----S-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred c----e-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 2 1 2233 33445555555 56788877644 379999998 56 4444444557888999998
Q ss_pred CCEEEEEeCCC--cEEEEEcCCCcceEEEEeecCCc-------cEEEEEeeeCCCCCcEEEEEeCCCeEEEE--eCCcee
Q 016224 323 DQFLLSCSLDK--TIKVWFATDSGNLEVTYTHNEEH-------GVLALCGMPDSEGKPVLLCSCNDNSVRFY--DLPSVI 391 (393)
Q Consensus 323 ~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~~l~s~s~dg~I~iw--d~~s~~ 391 (393)
+++++++..++ .|.+||+.+++ ...+..+.... .+..+.++++. +++++++. +.++|| |+.+++
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~---~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGA-ATQLCRREEEFAGPLWTPGMRWFAPLANG---LIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCC-EEESSCCSSBSSCCCCSTTCCSEEECTTS---CEEEEEBS-SSCEEEEEETTTTE
T ss_pred CeEEEEECCCCCeEEEEEECCCCc-eeecccccccccCccccccCceEeEeCCC---EEEEEEEc-CccEEEEEECCCCc
Confidence 66778888888 55566654443 33332222211 03345665544 48889888 999999 655543
No 195
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.37 E-value=1.5e-09 Score=98.42 Aligned_cols=219 Identities=12% Similarity=0.041 Sum_probs=143.8
Q ss_pred ceEEeeEecCc-EE-EecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCC----CcEEEEECCCCeE
Q 016224 111 DILCRNWVQGN-CM-YGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD----ETVRVWDCASGQC 184 (393)
Q Consensus 111 ~i~c~~~~~~~-~~-~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d----g~v~iwd~~~~~~ 184 (393)
...++.|++++ ++ ++..++.|.+||..++ +.......+...+.+++++++++++++...+ +.|.+||.++++.
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETK-EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTC-CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCC-cEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 45778888664 44 4678899999999887 5544444577889999999999988877666 6899999988776
Q ss_pred EEEEec---CCceEE--EEeCCCEEEEEcC-------CeEEEEECCCCceeeecCCCCcEEEEEEeCC--EE-EEEeCCC
Q 016224 185 AGVINL---GGEVGC--MISEGPWIFIGVT-------NFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LL-FAGTQDG 249 (393)
Q Consensus 185 ~~~~~~---~~~~~~--~~~~~~~l~~~~~-------~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l-~~~~~dg 249 (393)
...+.. ...+.. +.+++.++++... +.|..++..+++...+......+..++++++ .| ++...++
T Consensus 125 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~ 204 (333)
T 2dg1_A 125 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTAN 204 (333)
T ss_dssp EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCC
Confidence 544431 122333 3357777776643 4677777766555544444456789999987 45 4455688
Q ss_pred cEEEEEeccCCccccC-----ceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCcc------ce
Q 016224 250 AILAWKFNVTTNCFEP-----AASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTS------VV 316 (393)
Q Consensus 250 ~I~vwd~~~~~~~~~~-----~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~------~v 316 (393)
.|.+||+......... ...+.++ ..+..++++ ++++++...++.|.+||. +++.+..+..+.. .+
T Consensus 205 ~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~ 282 (333)
T 2dg1_A 205 RLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS 282 (333)
T ss_dssp EEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC
T ss_pred eEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCc
Confidence 9999999642111110 0111122 345667775 556666667889999998 5677777754433 57
Q ss_pred EEEEEc--CCEEEEEeCC
Q 016224 317 MSLLCW--DQFLLSCSLD 332 (393)
Q Consensus 317 ~~l~~~--~~~l~s~s~d 332 (393)
.+++++ ++.|+.++.+
T Consensus 283 ~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 283 THPQFIPGTNQLIICSND 300 (333)
T ss_dssp CEEEECTTSCEEEEEEEC
T ss_pred ceEEECCCCCEEEEEeCc
Confidence 888886 4566655554
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.37 E-value=2.2e-10 Score=100.61 Aligned_cols=231 Identities=12% Similarity=0.020 Sum_probs=147.8
Q ss_pred CEEEEEecCCCCEEE-EEeCCCcEEEEECCCCeEEEEEecC-Cce--EEEEeCCCEEEEEcCCeEEEEECCCCceeeec-
Q 016224 152 VVSGITLPSGSDKLY-SGSKDETVRVWDCASGQCAGVINLG-GEV--GCMISEGPWIFIGVTNFVKAWNTQTNTDLSLS- 226 (393)
Q Consensus 152 ~I~~i~~s~~~~~l~-s~s~dg~v~iwd~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~- 226 (393)
...+|++++++++++ +...++.|.+||..+.......... ..+ ..+.+++.++++..++.|.+|+........+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeec
Confidence 778999999998776 4467889999997665432211111 122 23335677666666779999998876654333
Q ss_pred CCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCC
Q 016224 227 GPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLET 302 (393)
Q Consensus 227 ~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~ 302 (393)
.....+..++++++ ++++...++.|.+|+...... ..........+..++++ ++++++...++.|.+||...
T Consensus 105 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 105 DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 23367899999877 566666788999996543321 11111122234556665 56666666788999999987
Q ss_pred cceeeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCC
Q 016224 303 LQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDN 380 (393)
Q Consensus 303 ~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg 380 (393)
.........+......++++ +.++++...++.|.+||....... . ...........+++.+++. ++++...++
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~-~~~~~~~~p~~i~~~~~g~---l~v~~~~~~ 255 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-V-LPFTGLNTPLAVAVDSDRT---VYVADRGND 255 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE-E-CCCCSCSCEEEEEECTTCC---EEEEEGGGT
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce-e-eccCCCCCceeEEECCCCC---EEEEECCCC
Confidence 66544333344567888887 455666666889999998654322 2 1112223477888876543 888888899
Q ss_pred eEEEEeCCcee
Q 016224 381 SVRFYDLPSVI 391 (393)
Q Consensus 381 ~I~iwd~~s~~ 391 (393)
.|+++++...+
T Consensus 256 ~v~~~~~~~~~ 266 (270)
T 1rwi_B 256 RVVKLTSLEHH 266 (270)
T ss_dssp EEEEECCCGGG
T ss_pred EEEEEcCCCcc
Confidence 99999987654
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.35 E-value=9.7e-10 Score=98.04 Aligned_cols=234 Identities=12% Similarity=0.042 Sum_probs=147.7
Q ss_pred EEEEecCCcCCEEEEEecCCCC-EEEEEeCCCcEEEEECCCCeEEEEEecC-CceEEEE--eCCCEEEEEc-CCeEEEEE
Q 016224 142 LLTQLEGHQKVVSGITLPSGSD-KLYSGSKDETVRVWDCASGQCAGVINLG-GEVGCMI--SEGPWIFIGV-TNFVKAWN 216 (393)
Q Consensus 142 ~~~~l~~h~~~I~~i~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~--~~~~~l~~~~-~~~i~v~d 216 (393)
.+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+... ..+..+. +++.++++.. ++.|.+||
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 3345556677888999999998 7788888999999999887 4444433 3343333 5778777764 57999999
Q ss_pred CCCCceeeecCC-----CCcEEEEEEeCC--EEEE----Ee-------------CCCcEEEEEeccCCccccCceeecCc
Q 016224 217 TQTNTDLSLSGP-----VGQVYAMAVGND--LLFA----GT-------------QDGAILAWKFNVTTNCFEPAASLKGH 272 (393)
Q Consensus 217 ~~~~~~~~~~~~-----~~~v~~l~~~~~--~l~~----~~-------------~dg~I~vwd~~~~~~~~~~~~~~~~~ 272 (393)
..+++...+... ...+..++++++ ++++ ++ ..+.|..++.. + + ...+..+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----~-~~~~~~~ 170 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----T-LSAPIRD 170 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----C-EEEEECC
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C----C-EEEeecC
Confidence 988776533221 234567889887 5555 22 12345555433 2 1 1222334
Q ss_pred eeeEEEEEEc--CCEEEEecCCCcEEEeeCC-Ccce---eeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCc
Q 016224 273 SLAVVSLVVG--ANKLYSGSMDNSIRVWNLE-TLQC---IQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSG 344 (393)
Q Consensus 273 ~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~-~~~~---~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~ 344 (393)
......++++ ++.+++.+.++.|.+||+. +++. ...+..+...+..++++ ++++++. ++.|.+||.. ++
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~ 247 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD 247 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC
Confidence 4445667775 5677888888999999987 4554 33333344455677887 5544444 8899999985 55
Q ss_pred ceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 345 NLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 345 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
.+..+..+.. +.+++|. ++++..|++++.+ .+..+++.+.+|
T Consensus 248 ~~~~~~~~~~---~~~~~f~--~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 248 ELGRVLTPQT---TSNLCFG--GPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp EEEEEECSSC---CCEEEEE--STTSCEEEEEETT-EEEEEECSCCBC
T ss_pred EEEEEECCCC---ceeEEEE--CCCCCEEEEEcCC-eEEEEEcccccc
Confidence 5444443322 6667774 2233377777765 466667666543
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=5.4e-10 Score=112.40 Aligned_cols=229 Identities=11% Similarity=0.060 Sum_probs=147.4
Q ss_pred ceEEeeEecCc--EEEecC-C----CeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCc----------
Q 016224 111 DILCRNWVQGN--CMYGEK-C----KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDET---------- 173 (393)
Q Consensus 111 ~i~c~~~~~~~--~~~g~~-d----g~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~---------- 173 (393)
.+....|++++ ++++.. . ..|++||+.++ +.+.....+ ..+..++|+||++.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg-~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA-KELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT-EEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC-CCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 57788999885 333222 2 28999999998 554432222 22667999999999999988876
Q ss_pred ------EEEEECCCCeE--EEEEecC--Cc---eEEEEeCCCEEEEE-c-----CCeEEEEECCC------C--ceeeec
Q 016224 174 ------VRVWDCASGQC--AGVINLG--GE---VGCMISEGPWIFIG-V-----TNFVKAWNTQT------N--TDLSLS 226 (393)
Q Consensus 174 ------v~iwd~~~~~~--~~~~~~~--~~---~~~~~~~~~~l~~~-~-----~~~i~v~d~~~------~--~~~~~~ 226 (393)
|++|++.+++. ...+... .. ...+.+++++|+.. . +..|.+||+.+ + ....+.
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 99999988763 2233322 11 23455788887764 2 56899999986 4 344555
Q ss_pred CCCCcEEEEEEeC--CEEEEEeC-C---CcEEEEEeccCCccccCceeecCcee--eEEEEEEc-CC-EEEEecCCC--c
Q 016224 227 GPVGQVYAMAVGN--DLLFAGTQ-D---GAILAWKFNVTTNCFEPAASLKGHSL--AVVSLVVG-AN-KLYSGSMDN--S 294 (393)
Q Consensus 227 ~~~~~v~~l~~~~--~~l~~~~~-d---g~I~vwd~~~~~~~~~~~~~~~~~~~--~v~~l~~~-~~-~l~sg~~dg--~ 294 (393)
.+...+... +++ +.|+..+. + +.|.+||+..... .....+..|.. .+..+.+. ++ ++++...|+ .
T Consensus 284 ~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 284 DNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEE--SKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred CCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc--ccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 555554442 443 44444443 2 3699999876531 11233333433 56667775 44 566777777 4
Q ss_pred EEEeeCCCcceeeEeccCccceEEEEEc--CCEEE-EEe---CCCcEEEEEcCCCc
Q 016224 295 IRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLL-SCS---LDKTIKVWFATDSG 344 (393)
Q Consensus 295 i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~-s~s---~dg~i~iwd~~~~~ 344 (393)
|.+||+.+++.+..+..+...+..+.++ ++.++ +.+ ..++|.+||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6677887788888888787778888876 44443 333 24789999997665
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.32 E-value=2.4e-09 Score=99.90 Aligned_cols=255 Identities=10% Similarity=0.039 Sum_probs=163.9
Q ss_pred CeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEecC-------
Q 016224 129 KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS----------KDETVRVWDCASGQCAGVINLG------- 191 (393)
Q Consensus 129 g~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s----------~dg~v~iwd~~~~~~~~~~~~~------- 191 (393)
+.|.++|..+. +.+.++..-..+ .++++||+++|+.+. .++.|.++|..+++.+..+...
T Consensus 99 ~~VsVID~~t~-~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTG-RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTT-EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCC-EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 79999999998 888888765566 899999999998876 3679999999999999988764
Q ss_pred ---CceEEEEeCCCEEEEEc---CCeEEEEECCCCceeeecCCCCcEEEEEE-eCCEEEEEeCCCcEEEEEeccCCcccc
Q 016224 192 ---GEVGCMISEGPWIFIGV---TNFVKAWNTQTNTDLSLSGPVGQVYAMAV-GNDLLFAGTQDGAILAWKFNVTTNCFE 264 (393)
Q Consensus 192 ---~~~~~~~~~~~~l~~~~---~~~i~v~d~~~~~~~~~~~~~~~v~~l~~-~~~~l~~~~~dg~I~vwd~~~~~~~~~ 264 (393)
..-..+.+++++++++. ++.|.++|+.+.+.+........ ..+.. ....+++.+.||++.+.++........
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~ 254 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNCRDGSLARVDFADGETKVT 254 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETTSSEEEEECCTTCCEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE
Confidence 12345667999988863 46899999999988732222222 12222 223677778899998888843321100
Q ss_pred CceeecCceee---EEEEEEcCCEEEEecCCCcEEEeeCCCcce--eeEecc------------CccceEEEEEcCCEEE
Q 016224 265 PAASLKGHSLA---VVSLVVGANKLYSGSMDNSIRVWNLETLQC--IQTLTE------------HTSVVMSLLCWDQFLL 327 (393)
Q Consensus 265 ~~~~~~~~~~~---v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~~------------~~~~v~~l~~~~~~l~ 327 (393)
....+.....+ ...+..++..++.....+.|.+.|+..... +..+.. .......+..+++.++
T Consensus 255 ~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rly 334 (426)
T 3c75_H 255 NTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIY 334 (426)
T ss_dssp ECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEE
T ss_pred eeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEE
Confidence 00001100111 112233456666666788999999865432 121110 0001123333356555
Q ss_pred EEeC----------CCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe-CCCeEEEEeCCceee
Q 016224 328 SCSL----------DKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC-NDNSVRFYDLPSVII 392 (393)
Q Consensus 328 s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s-~dg~I~iwd~~s~~l 392 (393)
+... ++.|.++|+.+.+.+..+.... ....+.++|++ +.++++.. .++.|.++|+.++++
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg--~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDA--EPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSS--SCEEEEEETTTTEEEEEETTTCCE
T ss_pred EEecccccccccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCC--CEEEEEEcCCCCeEEEEECCCCCE
Confidence 5432 3579999999988877775433 36677787653 32666666 599999999999875
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.30 E-value=6.8e-10 Score=97.40 Aligned_cols=226 Identities=8% Similarity=-0.033 Sum_probs=143.5
Q ss_pred eEEeeEecC-cEEE-e-cCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 112 ILCRNWVQG-NCMY-G-EKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 112 i~c~~~~~~-~~~~-g-~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
..++++.++ .++. + ..++.|.+|+..+. ........+...+.+|+++++++++++.. ++.|.+||....... .+
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVKLATGST-GTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred ccceEECCCCCEEEEccCCCCcEEEecCCCc-ccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 356677655 4455 5 56789999997665 22222223445788999999998666555 889999998765433 22
Q ss_pred ecC--CceEEE--EeCCCEEEEE-cCCeEEEEECCCCceee-ecCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCC
Q 016224 189 NLG--GEVGCM--ISEGPWIFIG-VTNFVKAWNTQTNTDLS-LSGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTT 260 (393)
Q Consensus 189 ~~~--~~~~~~--~~~~~~l~~~-~~~~i~v~d~~~~~~~~-~~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~ 260 (393)
... ..+..+ .+++.++++. .++.|.+|+..+..... .......+..++++++ ++++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 211 233333 2467766665 56789999766554432 2223346788999876 56666667899999977643
Q ss_pred ccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc--CCEEEEEeCCCcEE
Q 016224 261 NCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIK 336 (393)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~ 336 (393)
. ......+...+..++++ +.++++...++.|.+||............+...+.+++++ ++++++...++.|+
T Consensus 183 ~----~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 183 Q----VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp E----EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred e----EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 1 11111222456777776 4456666678899999987654433222333567888887 66778888899999
Q ss_pred EEEcCCCc
Q 016224 337 VWFATDSG 344 (393)
Q Consensus 337 iwd~~~~~ 344 (393)
++++...+
T Consensus 259 ~~~~~~~~ 266 (270)
T 1rwi_B 259 KLTSLEHH 266 (270)
T ss_dssp EECCCGGG
T ss_pred EEcCCCcc
Confidence 99986544
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.29 E-value=3.9e-09 Score=94.61 Aligned_cols=232 Identities=9% Similarity=0.063 Sum_probs=143.3
Q ss_pred cCCcCCEEEEEecCCCCEEEE-------EeCCCcEEEEECCCCeEEEEEe-----cCCceEEEE--eC-CCEEEEEcCCe
Q 016224 147 EGHQKVVSGITLPSGSDKLYS-------GSKDETVRVWDCASGQCAGVIN-----LGGEVGCMI--SE-GPWIFIGVTNF 211 (393)
Q Consensus 147 ~~h~~~I~~i~~s~~~~~l~s-------~s~dg~v~iwd~~~~~~~~~~~-----~~~~~~~~~--~~-~~~l~~~~~~~ 211 (393)
...-....+++|+++++++++ ...++.|.+||..+++...... ....+..+. ++ +.++++...+.
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~ 93 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLG 93 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCC
Confidence 334456688999999988877 5778899999988887654332 112233333 45 55666666668
Q ss_pred EEEEECCCCceeee-cC-----CCCcEEEEEEeCC--EEEEEeCC---------------CcEEEEEeccCCccccCcee
Q 016224 212 VKAWNTQTNTDLSL-SG-----PVGQVYAMAVGND--LLFAGTQD---------------GAILAWKFNVTTNCFEPAAS 268 (393)
Q Consensus 212 i~v~d~~~~~~~~~-~~-----~~~~v~~l~~~~~--~l~~~~~d---------------g~I~vwd~~~~~~~~~~~~~ 268 (393)
|.+||.. ++...+ .. ....+.+++++++ ++++...+ +.|..||.. + +.. .
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g----~~~-~ 166 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G----QMI-Q 166 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S----CEE-E
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C----CEE-E
Confidence 9999998 665544 21 1235789999887 44444443 456666543 2 111 1
Q ss_pred ecCceeeEEEEEEc----C--CEEE-EecCCCcEEEeeCC-Ccc-----eeeEeccCc-cceEEEEEc--CCEEEEEeCC
Q 016224 269 LKGHSLAVVSLVVG----A--NKLY-SGSMDNSIRVWNLE-TLQ-----CIQTLTEHT-SVVMSLLCW--DQFLLSCSLD 332 (393)
Q Consensus 269 ~~~~~~~v~~l~~~----~--~~l~-sg~~dg~i~iwd~~-~~~-----~~~~~~~~~-~~v~~l~~~--~~~l~s~s~d 332 (393)
+..+......++++ + +.|+ +...++.|.+||+. +++ ....+..+. .....++++ ++++++...+
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 11122233455555 3 3454 44568899999976 443 233344343 556778887 6677777778
Q ss_pred CcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 333 KTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 333 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+.|.+||..+++....+..+. ..+.++++.+++. .++++...++.|..|++..
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~--~~~~~i~~~~dg~--~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPF--EKPSNLHFKPQTK--TIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSS--SCEEEEEECTTSS--EEEEEETTTTEEEEEECSS
T ss_pred CEEEEEcCCCCcEeEEEeCCC--CCceeEEECCCCC--EEEEEeCCCCeEEEEeCCC
Confidence 999999987565555444332 3577888855432 2445555678999999864
No 202
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=5.4e-10 Score=111.35 Aligned_cols=264 Identities=12% Similarity=0.103 Sum_probs=169.9
Q ss_pred ecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCC-----------EEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 016224 118 VQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKV-----------VSGITLPSGSDKLYSGSKDETVRVWDCASGQCAG 186 (393)
Q Consensus 118 ~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~-----------I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 186 (393)
..+.+++++.++.|+.+|..++ +.+-++...... -..+++ ++..|+.++.|+.|..+|..+|+.+.
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTG-NRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVW 152 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTT-EEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ECCEEEEECCCCeEEEEECCCC-cEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEe
Confidence 4566777888899999999999 777666543210 112233 46689999999999999999999999
Q ss_pred EEecC-C-----ce--EEEEeCCCEEEEEc------CCeEEEEECCCCcee-eecCCCC---------------------
Q 016224 187 VINLG-G-----EV--GCMISEGPWIFIGV------TNFVKAWNTQTNTDL-SLSGPVG--------------------- 230 (393)
Q Consensus 187 ~~~~~-~-----~~--~~~~~~~~~l~~~~------~~~i~v~d~~~~~~~-~~~~~~~--------------------- 230 (393)
.+... . .+ ..+..++.+++... ++.|+.+|..+++.+ .+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred eecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 88865 2 11 11223444444332 689999999999977 3322110
Q ss_pred -----------cEEEEEEeCC--EEEEEeCCC-------------------cEEEEEeccCCccccCceeecCc------
Q 016224 231 -----------QVYAMAVGND--LLFAGTQDG-------------------AILAWKFNVTTNCFEPAASLKGH------ 272 (393)
Q Consensus 231 -----------~v~~l~~~~~--~l~~~~~dg-------------------~I~vwd~~~~~~~~~~~~~~~~~------ 272 (393)
....++++++ ++++++.++ .|..+|..++...+.. ....|
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~--~~~~~d~wd~~ 310 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHY--QETPGDNWDYT 310 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE--ESSTTCCSCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEE--ecCCCcccccc
Confidence 0124667665 777777664 4888998887543221 11111
Q ss_pred ---eeeEEEEEEcC---CEEEEecCCCcEEEeeCCCcceeeEeccCcc-----------ce-------------------
Q 016224 273 ---SLAVVSLVVGA---NKLYSGSMDNSIRVWNLETLQCIQTLTEHTS-----------VV------------------- 316 (393)
Q Consensus 273 ---~~~v~~l~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-----------~v------------------- 316 (393)
...+..+..++ ..++.++.+|.|+++|.++++++..+..... ++
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 12233344566 5799999999999999999999876652210 01
Q ss_pred -----EEEEEc--CCEEEEEeC-------------------------------------------CCcEEEEEcCCCcce
Q 016224 317 -----MSLLCW--DQFLLSCSL-------------------------------------------DKTIKVWFATDSGNL 346 (393)
Q Consensus 317 -----~~l~~~--~~~l~s~s~-------------------------------------------dg~i~iwd~~~~~~~ 346 (393)
..++++ ..++++... .+.|..||+.+++.+
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~ 470 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA 470 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence 134555 345555432 278999999988776
Q ss_pred EEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 347 EVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 347 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
....... ......+...+. +++.++.||.|++||+.++++
T Consensus 471 W~~~~~~---~~~~g~~~~~g~---~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 471 WSVEHVS---PWNGGTLTTAGN---VVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEESS---SCCCCEEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred eecCCCC---CCcCcceEeCCC---EEEEECCCCcEEEEECCCCce
Confidence 5554321 122222333333 788889999999999999875
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.27 E-value=4.1e-08 Score=87.04 Aligned_cols=231 Identities=11% Similarity=0.081 Sum_probs=149.1
Q ss_pred ecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--cCCceEEEE--eCCCEEEEEc-CCeEEEEECCCC
Q 016224 146 LEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN--LGGEVGCMI--SEGPWIFIGV-TNFVKAWNTQTN 220 (393)
Q Consensus 146 l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~~~~~~--~~~~~l~~~~-~~~i~v~d~~~~ 220 (393)
+..+...+.+|+++++++++++...++.|.+||.. ++...... ....+..+. +++.+.++.. ++.|..|+.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 44456789999999999977776668899999988 55433221 123343333 4677777664 6789999986 3
Q ss_pred ceeee--cCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCc
Q 016224 221 TDLSL--SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNS 294 (393)
Q Consensus 221 ~~~~~--~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~ 294 (393)
+...+ ......+..++++++ ++++...++.|.+||. .+.. . ..........+..++++ ++++++...++.
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI--R-EYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE--E-EEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE--E-EecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 33322 234567899999876 5555556789999987 3321 1 11122233456777776 446666666789
Q ss_pred EEEeeCCCcceeeE-eccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCc
Q 016224 295 IRVWNLETLQCIQT-LTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKP 371 (393)
Q Consensus 295 i~iwd~~~~~~~~~-~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 371 (393)
|..||. +++.... +..+...+..++++ +.++++...++.|.+||. ++. +..+........+..+++.+++.
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~--- 237 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAGID--- 237 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTC---
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc-EEEEECCCCCCCceeEEECCCCC---
Confidence 999999 6665432 33344567788887 556666666889999998 444 33332222234577787766543
Q ss_pred EEEEEeCCCeEEEEeCC
Q 016224 372 VLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 372 ~l~s~s~dg~I~iwd~~ 388 (393)
++++...++.|.+||..
T Consensus 238 l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 238 LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEeccCCceEEEECCC
Confidence 66665577899999973
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=1.2e-08 Score=91.51 Aligned_cols=229 Identities=9% Similarity=-0.000 Sum_probs=146.2
Q ss_pred ceEEeeEecC-cEEEe--------cCCCeEEEEECCCCcEEEEEec----CCcCCEEEEEecCC-CCEEEEEeCCCcEEE
Q 016224 111 DILCRNWVQG-NCMYG--------EKCKFLHSWTVGDGFKLLTQLE----GHQKVVSGITLPSG-SDKLYSGSKDETVRV 176 (393)
Q Consensus 111 ~i~c~~~~~~-~~~~g--------~~dg~i~vwd~~~~~~~~~~l~----~h~~~I~~i~~s~~-~~~l~s~s~dg~v~i 176 (393)
...+++|.++ .++.+ ..++.|.+||..++ +...... ++...+.+++++++ +++++ ++....|.+
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~ 96 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG-KKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLV 96 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTC-CEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCC-cEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEE
Confidence 3456777755 45545 56889999998777 3332221 25678999999999 65444 444557999
Q ss_pred EECCCCeEEEE-EecC-----Cce--EEEEeCCCEEEEEcC----------------CeEEEEECCCCceeeecCCCCcE
Q 016224 177 WDCASGQCAGV-INLG-----GEV--GCMISEGPWIFIGVT----------------NFVKAWNTQTNTDLSLSGPVGQV 232 (393)
Q Consensus 177 wd~~~~~~~~~-~~~~-----~~~--~~~~~~~~~l~~~~~----------------~~i~v~d~~~~~~~~~~~~~~~v 232 (393)
||.+ ++.... .... ..+ ..+.+++.+.++... +.|..++.. ++...+.......
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP 174 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc
Confidence 9998 765433 2211 112 223356777776532 467777766 5544443444556
Q ss_pred EEEEEe----CC--EEEE-EeCCCcEEEEEecc-CCcc-ccCceeecCce-eeEEEEEEc--CCEEEEecCCCcEEEeeC
Q 016224 233 YAMAVG----ND--LLFA-GTQDGAILAWKFNV-TTNC-FEPAASLKGHS-LAVVSLVVG--ANKLYSGSMDNSIRVWNL 300 (393)
Q Consensus 233 ~~l~~~----~~--~l~~-~~~dg~I~vwd~~~-~~~~-~~~~~~~~~~~-~~v~~l~~~--~~~l~sg~~dg~i~iwd~ 300 (393)
..++++ ++ .|++ ...++.|.+||+.. +... ......+..+. .....++++ ++++++...++.|.+||.
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 888998 87 4444 45678999999862 2110 01122233332 445667775 556666667889999999
Q ss_pred CCcceeeEeccCccceEEEEEc--CCEE-EEEeCCCcEEEEEcCCC
Q 016224 301 ETLQCIQTLTEHTSVVMSLLCW--DQFL-LSCSLDKTIKVWFATDS 343 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~s~dg~i~iwd~~~~ 343 (393)
++++.+..+..+...+.+++++ ++.| ++...++.|..|++...
T Consensus 255 ~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 255 DGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8888877777777788999986 5545 45556788999998643
No 205
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.25 E-value=4.9e-10 Score=112.41 Aligned_cols=232 Identities=10% Similarity=-0.012 Sum_probs=145.2
Q ss_pred ecceEEeeEecCcEE-E------ecCCCeEEEEECCCCcEEEEEecCCcCCE--EEEEecCCCCEEEEEeCCCc------
Q 016224 109 KTDILCRNWVQGNCM-Y------GEKCKFLHSWTVGDGFKLLTQLEGHQKVV--SGITLPSGSDKLYSGSKDET------ 173 (393)
Q Consensus 109 ~~~i~c~~~~~~~~~-~------g~~dg~i~vwd~~~~~~~~~~l~~h~~~I--~~i~~s~~~~~l~s~s~dg~------ 173 (393)
...+....|++++.. + |+.+..|++||+.++ +.+. ..+...+ ..++|+||++.|+.++.|..
T Consensus 120 ~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg-~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 120 TVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG-EWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC-CBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC-CCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 346788899988532 2 445679999999988 4320 1122223 67899999999999998876
Q ss_pred -------EEEEECCCCeE--EEEEecC---Cce--EEEEeCCCEEEEE-cCC----eEEEEECCCCceeeecCCCCcEEE
Q 016224 174 -------VRVWDCASGQC--AGVINLG---GEV--GCMISEGPWIFIG-VTN----FVKAWNTQTNTDLSLSGPVGQVYA 234 (393)
Q Consensus 174 -------v~iwd~~~~~~--~~~~~~~---~~~--~~~~~~~~~l~~~-~~~----~i~v~d~~~~~~~~~~~~~~~v~~ 234 (393)
|++|++.+++. ...+... ... ..+.+++++|+.. .++ .|.+++..+++...+..+...+..
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYE 276 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEE
Confidence 99999998762 2333322 122 3345688877654 343 677777766666656555555555
Q ss_pred EEEeCC-EEEEEe---CCCcEEEEEeccCCccccCceeecCc-eeeEEEEEEcCC-EEEEecCCCcEEEeeCC-Ccceee
Q 016224 235 MAVGND-LLFAGT---QDGAILAWKFNVTTNCFEPAASLKGH-SLAVVSLVVGAN-KLYSGSMDNSIRVWNLE-TLQCIQ 307 (393)
Q Consensus 235 l~~~~~-~l~~~~---~dg~I~vwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~-~l~sg~~dg~i~iwd~~-~~~~~~ 307 (393)
..+... +++... .++.|.+||+.+.... .....+..+ ...+..+++.++ ++++...|+..+||.+. +++.+.
T Consensus 277 ~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~ 355 (695)
T 2bkl_A 277 VHAWKDRFYVLTDEGAPRQRVFEVDPAKPARA-SWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVR 355 (695)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEBTTBCSGG-GCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEE
T ss_pred EEecCCcEEEEECCCCCCCEEEEEeCCCCCcc-CCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeE
Confidence 555444 444433 2578999998765310 011222222 445666777655 67778889988887654 455666
Q ss_pred EeccC-ccceEEEEEc--CCEEE-EEe---CCCcEEEEEcCCCc
Q 016224 308 TLTEH-TSVVMSLLCW--DQFLL-SCS---LDKTIKVWFATDSG 344 (393)
Q Consensus 308 ~~~~~-~~~v~~l~~~--~~~l~-s~s---~dg~i~iwd~~~~~ 344 (393)
.+..+ ...+..+.++ ++.++ +.+ ..++|++||+.+++
T Consensus 356 ~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 356 TVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp ECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 66655 5556666665 44444 332 34789999997655
No 206
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.24 E-value=1.7e-09 Score=108.00 Aligned_cols=264 Identities=13% Similarity=0.128 Sum_probs=167.2
Q ss_pred ecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCC----------E-EEEEecCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 016224 118 VQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKV----------V-SGITLPSGSDKLYSGSKDETVRVWDCASGQCAG 186 (393)
Q Consensus 118 ~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~----------I-~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 186 (393)
..+.+++++.++.|+.+|..++ +.+-++..+... + ..+++ .+..|+.++.|+.|..+|..+|+.+.
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDG-RLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTC-CEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCC-ceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEee
Confidence 4566778888999999999999 666666543221 0 11222 35688999999999999999999998
Q ss_pred EEecC-C-----ce--EEEEeCCCEEEEE------cCCeEEEEECCCCcee-eecCC--C--------------------
Q 016224 187 VINLG-G-----EV--GCMISEGPWIFIG------VTNFVKAWNTQTNTDL-SLSGP--V-------------------- 229 (393)
Q Consensus 187 ~~~~~-~-----~~--~~~~~~~~~l~~~------~~~~i~v~d~~~~~~~-~~~~~--~-------------------- 229 (393)
.+... . .+ ..+..++.+++.. .++.|..||..+++.+ .+... .
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred eecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 88764 1 11 1122344444432 2579999999999976 33210 0
Q ss_pred ---------CcEEEEEEeCC--EEEEEeCCCc-------------------EEEEEeccCCccccCceeecCc-------
Q 016224 230 ---------GQVYAMAVGND--LLFAGTQDGA-------------------ILAWKFNVTTNCFEPAASLKGH------- 272 (393)
Q Consensus 230 ---------~~v~~l~~~~~--~l~~~~~dg~-------------------I~vwd~~~~~~~~~~~~~~~~~------- 272 (393)
..-..++++++ ++++++.++. |..+|..++...+... ...|
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~--~~~~d~wd~~~ 303 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQ--TTPGDAWDYTA 303 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEE--SSTTCCSCCCC
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeee--cCCcccccccC
Confidence 00124677764 8888887763 9999999885433211 1111
Q ss_pred ee--eEEEEEEcCC---EEEEecCCCcEEEeeCCCcceeeEeccCcc-c-------------------------------
Q 016224 273 SL--AVVSLVVGAN---KLYSGSMDNSIRVWNLETLQCIQTLTEHTS-V------------------------------- 315 (393)
Q Consensus 273 ~~--~v~~l~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-~------------------------------- 315 (393)
.. .+..+..++. .++.++.+|.++++|.++++++........ .
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 11 1223445564 789999999999999999998744321110 0
Q ss_pred -------eEEEEEc--CCEEEEEeC---------------------------------------------CCcEEEEEcC
Q 016224 316 -------VMSLLCW--DQFLLSCSL---------------------------------------------DKTIKVWFAT 341 (393)
Q Consensus 316 -------v~~l~~~--~~~l~s~s~---------------------------------------------dg~i~iwd~~ 341 (393)
-..++++ ..++++... +|.|+.||+.
T Consensus 384 ~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~ 463 (689)
T 1yiq_A 384 AFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV 463 (689)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred CcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence 0113444 234444321 3789999999
Q ss_pred CCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 342 DSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
+++.+.....+.. ...-.+...+. +++.++.||.|+.||.++|++
T Consensus 464 tG~~~W~~~~~~~---~~~g~~~tagg---lvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 464 KQQAAWEVPYVTI---FNGGTLSTAGN---LVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp TTEEEEEEEESSS---CCCCEEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred CCCeEeEccCCCC---ccCccceECCC---EEEEECCCCcEEEEECCCCcc
Confidence 8887666544321 11112222222 888999999999999999986
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.23 E-value=1.2e-07 Score=84.06 Aligned_cols=262 Identities=12% Similarity=0.056 Sum_probs=162.4
Q ss_pred ceEEeeEecC-cEEEec-CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 111 DILCRNWVQG-NCMYGE-KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 111 ~i~c~~~~~~-~~~~g~-~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
...++.+.++ .++.+. .++.|.+||.. +......+..+...+.+|++.++++++++...++.|..||.. ++.. .+
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~ 97 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EY 97 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-Ee
Confidence 5567777655 455554 57899999987 522222344445789999999999887777668899999988 6543 33
Q ss_pred ecC---CceEEEE--eCCCEEEEEc-CCeEEEEECCCCceeee--cCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEecc
Q 016224 189 NLG---GEVGCMI--SEGPWIFIGV-TNFVKAWNTQTNTDLSL--SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNV 258 (393)
Q Consensus 189 ~~~---~~~~~~~--~~~~~l~~~~-~~~i~v~d~~~~~~~~~--~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~ 258 (393)
... ..+..+. +++.+.++.. ++.|..++.. ++...+ ......+..++++++ ++++...++.|..+|. .
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 322 2333333 4677777664 6789999988 555432 334567899999886 5555555788999987 3
Q ss_pred CCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeE-eccCccceEEEEEc--CCEEEEEeCCC
Q 016224 259 TTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQT-LTEHTSVVMSLLCW--DQFLLSCSLDK 333 (393)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~--~~~l~s~s~dg 333 (393)
+.. . ......+...+..+.++ +++.++....+.|.+||. +++.... +..+...+.+++++ +++.++...++
T Consensus 176 g~~--~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 251 (300)
T 2qc5_A 176 GKL--E-EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGAN 251 (300)
T ss_dssp CCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred CcE--E-EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCC
Confidence 321 1 11122233456777776 445555556778999998 4544332 33345567888887 45555555678
Q ss_pred cEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 334 TIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 334 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
.|..||. ++ .+..+........+.++...+++. +.+ ++.. .|..++..
T Consensus 252 ~i~~~~~-~g-~~~~~~~~~~~~~~~~i~~~~~g~---l~v-~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 252 QIGRITN-DN-TIQEYQLQTENAEPHGITFGKDGS---VWF-ALKC-KIGKLNLN 299 (300)
T ss_dssp EEEEECT-TS-CEEEEECCSTTCCCCCEEECTTSC---EEE-ECSS-EEEEEEEC
T ss_pred eEEEECC-CC-cEEEEECCccCCccceeEeCCCCC---EEE-EccC-ceEEeCCC
Confidence 9999998 33 333332222223455666655433 444 4444 77777654
No 208
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=2.1e-09 Score=98.60 Aligned_cols=248 Identities=10% Similarity=-0.018 Sum_probs=158.9
Q ss_pred eEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe----------CCCcEEEEECCCCeEEEEEecC--------
Q 016224 130 FLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS----------KDETVRVWDCASGQCAGVINLG-------- 191 (393)
Q Consensus 130 ~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s----------~dg~v~iwd~~~~~~~~~~~~~-------- 191 (393)
.|.++|..++ +.+.++..-..+ .++++||+++|+++. .++.|.+||+.+++.+.++..+
T Consensus 47 ~vsvID~~t~-~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCG-VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTT-EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCC-eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 8899999998 888888765666 799999999999886 3689999999999999998764
Q ss_pred --CceEEEEeCCCEEEEEc---CCeEEE--EECCCCceeeecCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEecc-----
Q 016224 192 --GEVGCMISEGPWIFIGV---TNFVKA--WNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNV----- 258 (393)
Q Consensus 192 --~~~~~~~~~~~~l~~~~---~~~i~v--~d~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~----- 258 (393)
.....+.+++++++++. .+.+.+ +|..+ ...+.. .+. ..+..... .+++.+.|+.+.+.|+..
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v-~~~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKS-ASC-FHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEEC-SSC-CCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEEC-CCc-eEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 23456667998888763 357888 88877 222211 111 11222333 666777899998888876
Q ss_pred CCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcc--eeeEeccC------------ccceEEEEEcCC
Q 016224 259 TTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQ--CIQTLTEH------------TSVVMSLLCWDQ 324 (393)
Q Consensus 259 ~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~------------~~~v~~l~~~~~ 324 (393)
+.........+.....+. . ..++..++..+. +.|.+.|+.+.. .+..+... ......+..+++
T Consensus 200 ~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~ 276 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276 (368)
T ss_dssp EECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred CeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence 211100000011111222 2 444566555556 999999986532 33333211 111123333466
Q ss_pred EEEEEeC---------CCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe-CCCeEEEEeCCceee
Q 016224 325 FLLSCSL---------DKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC-NDNSVRFYDLPSVII 392 (393)
Q Consensus 325 ~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s-~dg~I~iwd~~s~~l 392 (393)
.++.+.. ++.+.++|+.+.+.+..+.... ....+.+++++ ++++++.. .++.|.++|+.++++
T Consensus 277 ~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg--~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 277 GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDG--ASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSS--SCEEEEEETTTTEEEEEESSSCEE
T ss_pred EEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCC--CEEEEEccCCCCeEEEEECCCCcE
Confidence 6665432 2356699999887766655443 36678888774 34677777 599999999999875
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.20 E-value=7.6e-10 Score=101.87 Aligned_cols=167 Identities=11% Similarity=0.075 Sum_probs=128.7
Q ss_pred CEEEEEecCCCCEEEEEeCCCcEEEEECCCCe-----------EEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCC
Q 016224 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQ-----------CAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTN 220 (393)
Q Consensus 152 ~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~ 220 (393)
.+..+++++...+|++|+.+ .+++|++.+.+ .......+. +..+..++.+|+++.++.|++||+.+.
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~~~~~l~v~dv~sl 116 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVSTRNALYSLDLEEL 116 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEEESSEEEEEESSST
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEEcCCcEEEEEchhh
Confidence 68899999999999999998 56669865332 223445555 555544899999998899999999876
Q ss_pred cee-eecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEee
Q 016224 221 TDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWN 299 (393)
Q Consensus 221 ~~~-~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd 299 (393)
... ....+...+.++.+.+..+++++.||.|.+||+..... . .+...|.+++|+++-++.|..||++++|+
T Consensus 117 ~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~----~----~~~~~Vs~v~WSpkG~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 117 SEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKST----K----QLAQNVTSFDVTNSQLAVLLKDRSFQSFA 188 (388)
T ss_dssp TCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE----E----EEEESEEEEEECSSEEEEEETTSCEEEEE
T ss_pred hccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcc----c----cccCCceEEEEcCCceEEEEcCCcEEEEc
Confidence 644 45566677888888776788899999999999987632 1 15568999999988789999999999999
Q ss_pred CCCcce--eeEe------c---cCccceEEEEEcC--CEEEE
Q 016224 300 LETLQC--IQTL------T---EHTSVVMSLLCWD--QFLLS 328 (393)
Q Consensus 300 ~~~~~~--~~~~------~---~~~~~v~~l~~~~--~~l~s 328 (393)
...++. ..++ . +|...|.+|.|.+ .++++
T Consensus 189 ~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 189 WRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 887775 5566 2 3778899999983 35544
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.18 E-value=7.6e-08 Score=88.82 Aligned_cols=228 Identities=8% Similarity=-0.022 Sum_probs=145.5
Q ss_pred EeeEecCc--EEEec----------CCCeEEEEECCCCcEEEEEecCC-------cCCEEEEEecCCCCEEEEEeC--CC
Q 016224 114 CRNWVQGN--CMYGE----------KCKFLHSWTVGDGFKLLTQLEGH-------QKVVSGITLPSGSDKLYSGSK--DE 172 (393)
Q Consensus 114 c~~~~~~~--~~~g~----------~dg~i~vwd~~~~~~~~~~l~~h-------~~~I~~i~~s~~~~~l~s~s~--dg 172 (393)
-+.+++++ ++++. .++.|.+||..+. +.+.++... ...-..++|+||+++|+.+.. ++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~-~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC-cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 67777774 23332 3678999999887 666655422 123457899999999999874 57
Q ss_pred cEEEEECCCCeEEEE-EecCCceEEEEeCCC--EEEEEcCCeEEEEECCCCceeee-c-----CCCCcE-EEEEEeCC--
Q 016224 173 TVRVWDCASGQCAGV-INLGGEVGCMISEGP--WIFIGVTNFVKAWNTQTNTDLSL-S-----GPVGQV-YAMAVGND-- 240 (393)
Q Consensus 173 ~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~~~i~v~d~~~~~~~~~-~-----~~~~~v-~~l~~~~~-- 240 (393)
.|.++| .+++.+.. +..+..+. +.+.+. +++...++.+.+++. +++.... . ....++ ....+.++
T Consensus 149 ~v~viD-~t~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSPTCYH-IHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCCceEE-EEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCC
Confidence 899999 99999888 77655432 334332 334457889999999 7765521 1 111111 22333333
Q ss_pred EEEEEeCCCcEEEEEeccCCccccCceeec------------CceeeEEEEEEcCCEEEEecC----------CCcEEEe
Q 016224 241 LLFAGTQDGAILAWKFNVTTNCFEPAASLK------------GHSLAVVSLVVGANKLYSGSM----------DNSIRVW 298 (393)
Q Consensus 241 ~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~------------~~~~~v~~l~~~~~~l~sg~~----------dg~i~iw 298 (393)
.++..+..+.|.+.|+...... ....+. ........+..++++++++.. .+.|.++
T Consensus 226 ~~~~~~~~~~v~vid~~~~~~~--v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 226 RIVWPVYSGKILQADISAAGAT--NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred EEEEEcCCceEEEEeccCCcce--EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 3333347789999998654211 111110 111112344455666666542 3589999
Q ss_pred eCCCcceeeEeccCccceEEEEEc--CC-EEEEEe-CCCcEEEEEcCCCcceEE
Q 016224 299 NLETLQCIQTLTEHTSVVMSLLCW--DQ-FLLSCS-LDKTIKVWFATDSGNLEV 348 (393)
Q Consensus 299 d~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~s-~dg~i~iwd~~~~~~~~~ 348 (393)
|+.+++.+.++.... ....+.++ ++ +++++. .++.|.+||+.+.+.+..
T Consensus 304 D~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 304 TGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 999999999986433 46777777 66 677776 589999999998877665
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.17 E-value=1.8e-09 Score=99.30 Aligned_cols=169 Identities=12% Similarity=-0.021 Sum_probs=121.8
Q ss_pred eEEEEeCCCEEEEEcCCeEEEEECCCCc-----------eeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCcc
Q 016224 194 VGCMISEGPWIFIGVTNFVKAWNTQTNT-----------DLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNC 262 (393)
Q Consensus 194 ~~~~~~~~~~l~~~~~~~i~v~d~~~~~-----------~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~ 262 (393)
...+.+...+++++....+.+|++.... ......+.. |+.++|+...|+++ .++.|++||+.+...
T Consensus 42 lLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~- 118 (388)
T 1xip_A 42 NLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLEELSE- 118 (388)
T ss_dssp CEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEE-ESSEEEEEESSSTTC-
T ss_pred EEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEchhhhc-
Confidence 4555677888888877788889865433 112233555 99999944588887 889999999987632
Q ss_pred ccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEEeCCCcEEEEEcCC
Q 016224 263 FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 263 ~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~ 342 (393)
......|...+..+.+.+..+++++.||.|.+||+.+++... +...|++++|+++-++.|..||++++|+...
T Consensus 119 ---~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 119 ---FRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRN 191 (388)
T ss_dssp ---EEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred ---cCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCC
Confidence 223344556677777766569999999999999999877653 4568999999977689999999999998865
Q ss_pred Ccc--eEEEEe----e---cCCccEEEEEeeeCCCCCcEEEE
Q 016224 343 SGN--LEVTYT----H---NEEHGVLALCGMPDSEGKPVLLC 375 (393)
Q Consensus 343 ~~~--~~~~~~----~---~~~~~v~~~~~~~~~~~~~~l~s 375 (393)
... ...+.. . .+...+.++.|.++.. ++++
T Consensus 192 ~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~---flv~ 230 (388)
T 1xip_A 192 GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD---FLAV 230 (388)
T ss_dssp TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE---EEEE
T ss_pred ccccccceecCCcccccccCCCeeEEEEEEecCCe---EEEE
Confidence 553 233311 1 1356799999987644 5554
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.16 E-value=1.7e-08 Score=101.19 Aligned_cols=236 Identities=11% Similarity=0.056 Sum_probs=142.1
Q ss_pred CCcCCEEEEEecCCCCEEEEE-----eCCCcEEEEECCCCeEEEE-EecC-CceEEEEeCCCEEEEE-cCC---------
Q 016224 148 GHQKVVSGITLPSGSDKLYSG-----SKDETVRVWDCASGQCAGV-INLG-GEVGCMISEGPWIFIG-VTN--------- 210 (393)
Q Consensus 148 ~h~~~I~~i~~s~~~~~l~s~-----s~dg~v~iwd~~~~~~~~~-~~~~-~~~~~~~~~~~~l~~~-~~~--------- 210 (393)
+|...+..++||||+++||-+ +.+.+|++||+.+++.+.. +... .....+. +++.|+.+ .+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 466689999999999988843 3335799999999986553 2211 2234556 88766654 442
Q ss_pred ----eEEEEECCCCce---eeecC---CCCcEEEEEEeCC--EE-EEEeC---CCcEEEEEeccCCccccCceeecCcee
Q 016224 211 ----FVKAWNTQTNTD---LSLSG---PVGQVYAMAVGND--LL-FAGTQ---DGAILAWKFNVTTNCFEPAASLKGHSL 274 (393)
Q Consensus 211 ----~i~v~d~~~~~~---~~~~~---~~~~v~~l~~~~~--~l-~~~~~---dg~I~vwd~~~~~~~~~~~~~~~~~~~ 274 (393)
.|++|++.+... ..... +...+..+.++++ +| ++... ...|+++|+..+... ...+..+..
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~---~~~l~~~~~ 281 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP---LLTVQGDLD 281 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC---CEEEECSSS
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc---eEEEeCCCC
Confidence 499999987653 22222 3445788999998 33 44432 358999998775321 223333333
Q ss_pred eEE-EEEEcCCEEE-EecC---CCcEEEeeCCCcce--eeEeccCccceEEEEEcCCEEEEEeC-CC--cEEEEEcCCCc
Q 016224 275 AVV-SLVVGANKLY-SGSM---DNSIRVWNLETLQC--IQTLTEHTSVVMSLLCWDQFLLSCSL-DK--TIKVWFATDSG 344 (393)
Q Consensus 275 ~v~-~l~~~~~~l~-sg~~---dg~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~l~s~s~-dg--~i~iwd~~~~~ 344 (393)
... .+..+++.|+ .... .+.|.++|+.++.. ...+..|...+..+...+++|+.... ++ .|++||+.. .
T Consensus 282 ~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g-~ 360 (693)
T 3iuj_A 282 ADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEG-K 360 (693)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTS-C
T ss_pred ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCC-C
Confidence 222 2455666544 3333 36899999987654 34555555554466666887766655 44 688898863 3
Q ss_pred ceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeC---CCeEEEEeCCcee
Q 016224 345 NLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCN---DNSVRFYDLPSVI 391 (393)
Q Consensus 345 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~---dg~I~iwd~~s~~ 391 (393)
....+. ......+..+.+.++. ..++++.+. -+.|..||+.+++
T Consensus 361 ~~~~l~-~p~~~~~~~~~~~~d~--~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 361 RVREVA-LPGLGSVSGFNGKHDD--PALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEEC-CSSSSEEEECCCCTTC--SCEEEEEECSSSCCEEEEECTTTCC
T ss_pred eeEEee-cCCCceEEeeecCCCC--CEEEEEecCCCCCCEEEEEECCCCe
Confidence 333322 2223345555555443 334444433 2789999998764
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=1.5e-08 Score=92.84 Aligned_cols=236 Identities=10% Similarity=-0.013 Sum_probs=152.1
Q ss_pred eeEecCc--EEEec----------CCCeEEEEECCCCcEEEEEecCC-------cCCEEEEEecCCCCEEEEEeC--CCc
Q 016224 115 RNWVQGN--CMYGE----------KCKFLHSWTVGDGFKLLTQLEGH-------QKVVSGITLPSGSDKLYSGSK--DET 173 (393)
Q Consensus 115 ~~~~~~~--~~~g~----------~dg~i~vwd~~~~~~~~~~l~~h-------~~~I~~i~~s~~~~~l~s~s~--dg~ 173 (393)
+.+++++ ++.+. .++.|.+||..+. +.+.++.-. ...-..++|+|||++|+.+.. ++.
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~-~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL-LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 7788764 33332 3678999999998 777776421 123456899999999998864 689
Q ss_pred EEEEECCCCeEEEEEecCCceEEEEeCC-CEEEEEcCCeEEEEECCC-Cceee-ecCC----CCcEE-EEEEe-CC-EEE
Q 016224 174 VRVWDCASGQCAGVINLGGEVGCMISEG-PWIFIGVTNFVKAWNTQT-NTDLS-LSGP----VGQVY-AMAVG-ND-LLF 243 (393)
Q Consensus 174 v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~i~v~d~~~-~~~~~-~~~~----~~~v~-~l~~~-~~-~l~ 243 (393)
|.++|+.+++.+.++..+.......... .+++.+.||.+.+.++.+ ++... ...+ ...+. ...|. ++ .++
T Consensus 162 VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~ 241 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLV 241 (386)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEE
T ss_pred EEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEE
Confidence 9999999999999998765432222222 344556788888888876 44321 1111 11221 13443 34 555
Q ss_pred EEeCCCcEEEEEeccCCccccCceeec------------CceeeEEEEEEcCCEEEEecC----------CCcEEEeeCC
Q 016224 244 AGTQDGAILAWKFNVTTNCFEPAASLK------------GHSLAVVSLVVGANKLYSGSM----------DNSIRVWNLE 301 (393)
Q Consensus 244 ~~~~dg~I~vwd~~~~~~~~~~~~~~~------------~~~~~v~~l~~~~~~l~sg~~----------dg~i~iwd~~ 301 (393)
..+.+|.|++.|+...... ....+. ........+..++++++.... ...|.++|+.
T Consensus 242 ~vs~~g~V~v~d~~~~~~~--v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~ 319 (386)
T 3sjl_D 242 WPTYTGKIHQIDLSSGDAK--FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK 319 (386)
T ss_dssp EEBTTSEEEEEECTTSSCE--ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEeCCCEEEEEECCCCcce--eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC
Confidence 5777899999998765321 111110 111123444455666666432 2579999999
Q ss_pred CcceeeEeccCccceEEEEEc--CC-EEEEE-eCCCcEEEEEcCCCcceEEEEeecC
Q 016224 302 TLQCIQTLTEHTSVVMSLLCW--DQ-FLLSC-SLDKTIKVWFATDSGNLEVTYTHNE 354 (393)
Q Consensus 302 ~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~ 354 (393)
+++.+.++.... .+.++.++ ++ +|++. ..++.|.++|..+++.+..+....+
T Consensus 320 t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 320 TGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH 375 (386)
T ss_dssp TCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCS
T ss_pred CCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCC
Confidence 999999987432 56677777 54 56654 5589999999998887766655443
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.13 E-value=1.2e-07 Score=84.62 Aligned_cols=206 Identities=7% Similarity=0.022 Sum_probs=132.8
Q ss_pred EEeeEecC--cEE-EecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 113 LCRNWVQG--NCM-YGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 113 ~c~~~~~~--~~~-~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
-+..|+++ .++ +....+.|+.||..++ +. ..+. ....+.+++++++++++++ . +..|.+||.++++......
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~-~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTK-QV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTC-CE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCC-cE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEe
Confidence 46677763 333 4567889999999877 33 2332 4568999999999995554 4 5689999999887654443
Q ss_pred cCC-----ceE--EEEeCCCEEEEEc----------CCeEEEEECCC-CceeeecCCCCcEEEEEEeCC---EEEEEeCC
Q 016224 190 LGG-----EVG--CMISEGPWIFIGV----------TNFVKAWNTQT-NTDLSLSGPVGQVYAMAVGND---LLFAGTQD 248 (393)
Q Consensus 190 ~~~-----~~~--~~~~~~~~l~~~~----------~~~i~v~d~~~-~~~~~~~~~~~~v~~l~~~~~---~l~~~~~d 248 (393)
... .+. .+.+++++.++.. ...-.+|.+.. ++...+.........++|+++ ++++.+.+
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 321 122 2335788776542 12334554432 333333444456788999987 44566678
Q ss_pred CcEEEEEec--cCCcc-ccCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcC
Q 016224 249 GAILAWKFN--VTTNC-FEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWD 323 (393)
Q Consensus 249 g~I~vwd~~--~~~~~-~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 323 (393)
+.|.+|++. ++... .+....+..+......++++ +++.++...++.|.+||..+++.+..+..+...+++++|.+
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g 250 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGG 250 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEES
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeC
Confidence 899999984 22110 01112222233455667775 55666666778899999999999999988877899999973
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.10 E-value=3.3e-08 Score=98.52 Aligned_cols=268 Identities=10% Similarity=0.065 Sum_probs=164.7
Q ss_pred eEecCcEEEecCCCeEEEEECCCCcEEEEEecCC-c----CCEEEEEecCCCCEEEEEeC------CCcEEEEECCCCeE
Q 016224 116 NWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGH-Q----KVVSGITLPSGSDKLYSGSK------DETVRVWDCASGQC 184 (393)
Q Consensus 116 ~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h-~----~~I~~i~~s~~~~~l~s~s~------dg~v~iwd~~~~~~ 184 (393)
.+..+.+++++.|+.|+.+|..++ +.+..+..+ . ..+.+--.. .+..++.++. ++.|..+|..+|+.
T Consensus 125 a~~~~~v~v~~~dg~l~alD~~tG-~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~ 202 (677)
T 1kb0_A 125 ALWKGKVYVGAWDGRLIALDAATG-KEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGER 202 (677)
T ss_dssp EEETTEEEEECTTSEEEEEETTTC-CEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred eEECCEEEEEcCCCEEEEEECCCC-CEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcE
Confidence 345677888999999999999999 676666644 1 112110001 2345555543 79999999999999
Q ss_pred EEEEecCCce-----------------------------------EEEEeCCCEEEEEcCC-------------------
Q 016224 185 AGVINLGGEV-----------------------------------GCMISEGPWIFIGVTN------------------- 210 (393)
Q Consensus 185 ~~~~~~~~~~-----------------------------------~~~~~~~~~l~~~~~~------------------- 210 (393)
+..+...... ..+.+++.+++++..+
T Consensus 203 ~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~ 282 (677)
T 1kb0_A 203 KWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYL 282 (677)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeee
Confidence 9888653211 2233466777766322
Q ss_pred -eEEEEECCCCcee-eec--CCC--------Cc-EEEEEEeC---CEEEEEeCCCcEEEEEeccCCccccCcee------
Q 016224 211 -FVKAWNTQTNTDL-SLS--GPV--------GQ-VYAMAVGN---DLLFAGTQDGAILAWKFNVTTNCFEPAAS------ 268 (393)
Q Consensus 211 -~i~v~d~~~~~~~-~~~--~~~--------~~-v~~l~~~~---~~l~~~~~dg~I~vwd~~~~~~~~~~~~~------ 268 (393)
.|..+|..+++.+ .+. .+. .+ +..+.... ..+++++.+|.|+++|..+++........
T Consensus 283 ~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 283 ASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 4999999999877 322 221 11 22222233 47889999999999999887532111000
Q ss_pred -ecCceeeE------------------------EEEEEc--CCEEEEecC------------------------------
Q 016224 269 -LKGHSLAV------------------------VSLVVG--ANKLYSGSM------------------------------ 291 (393)
Q Consensus 269 -~~~~~~~v------------------------~~l~~~--~~~l~sg~~------------------------------ 291 (393)
+......+ ..++++ ..++++...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 00000000 023343 456665432
Q ss_pred -------------CCcEEEeeCCCcceeeEeccCccce-EEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCcc
Q 016224 292 -------------DNSIRVWNLETLQCIQTLTEHTSVV-MSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHG 357 (393)
Q Consensus 292 -------------dg~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 357 (393)
.+.|..||+.+++.+.++....... ..+...+..++.++.|+.+++||.++++.+..+..... ..
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~-~~ 521 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG-VV 521 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-CC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC-cc
Confidence 2789999999999988876432211 22444578889999999999999999998877764432 22
Q ss_pred EEEEEeeeCCCCCcEEEEEeC----------------CCeEEEEeCC
Q 016224 358 VLALCGMPDSEGKPVLLCSCN----------------DNSVRFYDLP 388 (393)
Q Consensus 358 v~~~~~~~~~~~~~~l~s~s~----------------dg~I~iwd~~ 388 (393)
...+.+..+ ++++++..+. .+.+.+|.+.
T Consensus 522 ~~p~~y~~~--G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 522 AAPSTYMVD--GRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp SCCEEEEET--TEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred cCCEEEEeC--CEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 233445444 3345555333 4677888776
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.08 E-value=6.1e-07 Score=79.94 Aligned_cols=223 Identities=12% Similarity=0.105 Sum_probs=137.2
Q ss_pred EecCCcCCEEEEEecCCCC-EEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEE--eCCCEEEEEcCCeEEEEECCCCc
Q 016224 145 QLEGHQKVVSGITLPSGSD-KLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMI--SEGPWIFIGVTNFVKAWNTQTNT 221 (393)
Q Consensus 145 ~l~~h~~~I~~i~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~i~v~d~~~~~ 221 (393)
.+..+..--.+..|++++. ++++...++.|..||..+++. ..+.....+..+. ++++++++ .++.|.+||..+++
T Consensus 7 ~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-IGTKFCALNWKEQS 84 (297)
T ss_dssp EECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTE
T ss_pred EeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-ECCeEEEEECCCCc
Confidence 3444555667888998654 556666788999999988765 4455555555544 57775554 47789999998877
Q ss_pred eeeecC-----CCCcEEEEEEeCC-EEEEEe-C---------CCcEEEEEeccCCccccCceeecCceeeEEEEEEc--C
Q 016224 222 DLSLSG-----PVGQVYAMAVGND-LLFAGT-Q---------DGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--A 283 (393)
Q Consensus 222 ~~~~~~-----~~~~v~~l~~~~~-~l~~~~-~---------dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~ 283 (393)
...+.. ....+..++++++ .|+.++ . ...-.+|.+.... . ...+..+......++++ +
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~-~~~~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH---H-VKKYFDQVDISNGLDWSLDH 160 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS---C-EEEEEEEESBEEEEEECTTS
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC---C-EEEEeeccccccceEEcCCC
Confidence 553322 2345788999988 333333 1 1334566554331 1 11122222334566665 5
Q ss_pred CEE-EEecCCCcEEEeeC--CCcce-----eeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeec
Q 016224 284 NKL-YSGSMDNSIRVWNL--ETLQC-----IQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHN 353 (393)
Q Consensus 284 ~~l-~sg~~dg~i~iwd~--~~~~~-----~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 353 (393)
+.| ++.+.++.|.+||+ .++.. +..+..+......++++ +++.++....+.|.+||..+++.+..+....
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 554 56667889999987 45543 22333344556778887 6666666677889999998777666655432
Q ss_pred CCccEEEEEee-eCCCCCcEEEEEe
Q 016224 354 EEHGVLALCGM-PDSEGKPVLLCSC 377 (393)
Q Consensus 354 ~~~~v~~~~~~-~~~~~~~~l~s~s 377 (393)
..+.+++|. |+.. .++++..
T Consensus 241 --~~~t~~~f~g~d~~--~L~vt~~ 261 (297)
T 3g4e_A 241 --DKTTSCCFGGKNYS--EMYVTCA 261 (297)
T ss_dssp --SBEEEEEEESGGGC--EEEEEEB
T ss_pred --CCceEEEEeCCCCC--EEEEEcC
Confidence 358889987 5533 2444444
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.07 E-value=6.9e-11 Score=109.25 Aligned_cols=183 Identities=10% Similarity=0.038 Sum_probs=106.7
Q ss_pred ecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc--e-
Q 016224 118 VQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE--V- 194 (393)
Q Consensus 118 ~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~--~- 194 (393)
..+.+++++.|+.|+.||..++ +.+.+++. ..+.+..+..++..+++++.||.|..||..+++.+..+..... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG-~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG-SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC-CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCC-CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 3456778999999999999999 77777765 4555555566777888888999999999999987766543311 0
Q ss_pred -EEEE-eCCCEEEEEcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecC
Q 016224 195 -GCMI-SEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKG 271 (393)
Q Consensus 195 -~~~~-~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~ 271 (393)
..+. .++.+++.+.++.|+.||..+++.+ .+..+. .+ ..+...+.+++++.++.|+.||.+++...+. +..
T Consensus 85 ~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~-~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~----~~~ 158 (369)
T 2hz6_A 85 ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-AD-SLSPSTSLLYLGRTEYTITMYDTKTRELRWN----ATY 158 (369)
T ss_dssp TCSCC-----CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCE----EEE
T ss_pred cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-cc-cccccCCEEEEEecCCEEEEEECCCCCEEEe----Eec
Confidence 1111 3344444457889999999999876 333222 11 1111334888899999999999988754322 211
Q ss_pred ceeeEEEEEEcC-----CEEEEecCCCcEEEeeCCCcceeeEecc
Q 016224 272 HSLAVVSLVVGA-----NKLYSGSMDNSIRVWNLETLQCIQTLTE 311 (393)
Q Consensus 272 ~~~~v~~l~~~~-----~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 311 (393)
+. .....+++ +.+++++.||.|+.||.++++.+.++..
T Consensus 159 ~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 159 FD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp EE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC
T ss_pred cc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC
Confidence 11 11222333 5688889999999999999998887763
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.07 E-value=6.9e-07 Score=79.04 Aligned_cols=228 Identities=14% Similarity=0.111 Sum_probs=145.5
Q ss_pred CCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC---CceEEEE--eCCCEEEEEc-CCeEEEEECCCCc
Q 016224 148 GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG---GEVGCMI--SEGPWIFIGV-TNFVKAWNTQTNT 221 (393)
Q Consensus 148 ~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~---~~~~~~~--~~~~~l~~~~-~~~i~v~d~~~~~ 221 (393)
.....+.+|++.+++++.++...++.|.+||.. ++... +... ..+..+. +++.+.++.. ++.|..+|.. ++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 345688999999999988877778999999988 55443 3322 2333333 4677666664 5789999988 55
Q ss_pred eeee--cCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecCCCcE
Q 016224 222 DLSL--SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSI 295 (393)
Q Consensus 222 ~~~~--~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i 295 (393)
...+ ......+..++++++ ++++...++.|..+|.. +.. . ...+......+..++++ ++++++...++.|
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~--~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI--Y-EYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE--E-EEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE--E-EccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 4422 223467899999876 55555557889999876 321 1 11122233456777775 5556666667899
Q ss_pred EEeeCCCcceeeE-eccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcE
Q 016224 296 RVWNLETLQCIQT-LTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPV 372 (393)
Q Consensus 296 ~iwd~~~~~~~~~-~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 372 (393)
..||. +++.... +..+...+..+.++ +.+.++....+.|.+||. ++. ............+..+++.+++. +
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~~g~---l 243 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE-ISEYDIPTPNARPHAITAGKNSE---I 243 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTC---E
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc-EEEEECCCCCCCceEEEECCCCC---E
Confidence 99998 5554432 22334567888887 455555556778999998 333 22222222234467777766543 6
Q ss_pred EEEEeCCCeEEEEeCC
Q 016224 373 LLCSCNDNSVRFYDLP 388 (393)
Q Consensus 373 l~s~s~dg~I~iwd~~ 388 (393)
.++...++.|..|+..
T Consensus 244 ~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 244 WFTEWGANQIGRITND 259 (300)
T ss_dssp EEEETTTTEEEEECTT
T ss_pred EEeccCCCeEEEECCC
Confidence 6666567899999873
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.06 E-value=8.9e-08 Score=95.59 Aligned_cols=258 Identities=14% Similarity=0.085 Sum_probs=156.6
Q ss_pred eEecCcEEEecCCCeEEEEECCCCcEEEEEecC--CcCCEEEEEecC---CCCEEEEEe------CCCcEEEEECCCCeE
Q 016224 116 NWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEG--HQKVVSGITLPS---GSDKLYSGS------KDETVRVWDCASGQC 184 (393)
Q Consensus 116 ~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~--h~~~I~~i~~s~---~~~~l~s~s------~dg~v~iwd~~~~~~ 184 (393)
....+.+++++.|+.|+.+|..++ +.+-.+.. +......+..+| ++ .++.+. .+|.|..||..+|+.
T Consensus 118 ~~~~g~v~v~~~dg~l~AlDa~TG-~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 118 AVWKGKVYVGVLDGRLEAIDAKTG-QRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp EEETTEEEEECTTSEEEEEETTTC-CEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred EEECCEEEEEccCCEEEEEECCCC-CEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 345677888999999999999999 66655543 211111111222 34 444443 378999999999999
Q ss_pred EEEEecCC----------------------------------ceEEEEeCCCEEEEEcCC--------------------
Q 016224 185 AGVINLGG----------------------------------EVGCMISEGPWIFIGVTN-------------------- 210 (393)
Q Consensus 185 ~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~~~-------------------- 210 (393)
+..+.... ....+.++..+++++..+
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 88876310 012333456777776332
Q ss_pred eEEEEECCCCcee-eecC--CC-------CcE--EEEEEeCC---EEEEEeCCCcEEEEEeccCCccccCc-------ee
Q 016224 211 FVKAWNTQTNTDL-SLSG--PV-------GQV--YAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPA-------AS 268 (393)
Q Consensus 211 ~i~v~d~~~~~~~-~~~~--~~-------~~v--~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~~~~-------~~ 268 (393)
.|..+|..+++.+ .+.. |. ..+ ..+.+... .++.++.+|.++++|..+++...... ..
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 4999999999987 3322 21 111 22333332 78889999999999998875321000 00
Q ss_pred -----------------ecCceeeE-----------EEEEEc--CCEEEEecC---------------------------
Q 016224 269 -----------------LKGHSLAV-----------VSLVVG--ANKLYSGSM--------------------------- 291 (393)
Q Consensus 269 -----------------~~~~~~~v-----------~~l~~~--~~~l~sg~~--------------------------- 291 (393)
.......+ ..++++ ..++++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 00000000 013333 345554321
Q ss_pred ------------------CCcEEEeeCCCcceeeEeccCccceE-EEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEee
Q 016224 292 ------------------DNSIRVWNLETLQCIQTLTEHTSVVM-SLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTH 352 (393)
Q Consensus 292 ------------------dg~i~iwd~~~~~~~~~~~~~~~~v~-~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 352 (393)
+|.|+.||+.+++.+.++..+..... .+...+.+++.++.|+.|+.||.++++.+..+...
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 47899999999999888876543222 34445889999999999999999999888776543
Q ss_pred cCCccEEEEEeeeCCCCCcEEEEEeC
Q 016224 353 NEEHGVLALCGMPDSEGKPVLLCSCN 378 (393)
Q Consensus 353 ~~~~~v~~~~~~~~~~~~~~l~s~s~ 378 (393)
.. .....+.|..+ +++|+++.+.
T Consensus 516 ~~-~~~~p~ty~~~--G~qyv~~~~G 538 (689)
T 1yiq_A 516 SG-VMAAPVTYSVD--GEQYVTFMAG 538 (689)
T ss_dssp SC-CCSCCEEEEET--TEEEEEEEEC
T ss_pred CC-cccCceEEEEC--CEEEEEEEec
Confidence 22 12223555444 4456665543
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.06 E-value=2.9e-07 Score=86.04 Aligned_cols=230 Identities=10% Similarity=0.019 Sum_probs=148.9
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCc-eEEEEeCCCEEEEE-cCC--eEEEEECCCCcee-ee
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGE-VGCMISEGPWIFIG-VTN--FVKAWNTQTNTDL-SL 225 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-~~~--~i~v~d~~~~~~~-~~ 225 (393)
.....|+|+++++++++...++.|++||..+++.......... ...+.++++.|+++ .++ .|.+++...+... .+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence 4688999999998777777789999999998877665554322 24445677777766 333 7999998766543 22
Q ss_pred ----cCCCCcEEEEEEeC-C-EEEEEeCCCcEEEEEeccCCccccCcee--ecCceeeE-E-EEEEcC--C-EEEEecCC
Q 016224 226 ----SGPVGQVYAMAVGN-D-LLFAGTQDGAILAWKFNVTTNCFEPAAS--LKGHSLAV-V-SLVVGA--N-KLYSGSMD 292 (393)
Q Consensus 226 ----~~~~~~v~~l~~~~-~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~--~~~~~~~v-~-~l~~~~--~-~l~sg~~d 292 (393)
......+.++++++ + .|+++..++.|+.||...... ..... ..++...- . .+++++ . ++++-..+
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~--~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV--TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE--EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE--EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 22456678899998 4 666677788999999876531 11100 11111111 1 566653 3 55566678
Q ss_pred CcEEEeeCCCcceeeEeccCc---------------cceEEEEEc--CCEEEEEe-CCCcEEEEEcCCCcceEEEEeec-
Q 016224 293 NSIRVWNLETLQCIQTLTEHT---------------SVVMSLLCW--DQFLLSCS-LDKTIKVWFATDSGNLEVTYTHN- 353 (393)
Q Consensus 293 g~i~iwd~~~~~~~~~~~~~~---------------~~v~~l~~~--~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~- 353 (393)
+.|+.||.... +..+.++. .....++++ ++++++-. .++.|+.|++.++. +..+..+.
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~ 365 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVD 365 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTT
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCC
Confidence 89999997643 33333322 235778887 56667777 78899999976554 44444331
Q ss_pred ------------CCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 354 ------------EEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 354 ------------~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
.-.....+++.+++ .++++-..++.|+.++++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g---~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEG---GYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSS---EEEEEESTTCEEEEEEEC
T ss_pred CCCcCCCChhceEeCCceEEEEcCCC---CEEEEECCCCeEEEEEeC
Confidence 01346778877663 377777788899988764
No 221
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.01 E-value=3.1e-08 Score=100.08 Aligned_cols=230 Identities=17% Similarity=0.092 Sum_probs=140.0
Q ss_pred cceEEeeEecCc--EEEecCC-----CeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCc---------
Q 016224 110 TDILCRNWVQGN--CMYGEKC-----KFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDET--------- 173 (393)
Q Consensus 110 ~~i~c~~~~~~~--~~~g~~d-----g~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~--------- 173 (393)
..+....|++++ ++++..+ ..|++||+.++ +.+.. ..+...+..++|+|| +.|+.++.|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg-~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG-KPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC-CEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC-CCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 367788999884 3333221 46999999998 44432 112222357899999 99998887664
Q ss_pred -----EEEEECCCCeE--EEEEecCC---ce--EEEEeCCCEEEEE-cC-----CeEEEEECCCC--c-eeeecCCCCcE
Q 016224 174 -----VRVWDCASGQC--AGVINLGG---EV--GCMISEGPWIFIG-VT-----NFVKAWNTQTN--T-DLSLSGPVGQV 232 (393)
Q Consensus 174 -----v~iwd~~~~~~--~~~~~~~~---~~--~~~~~~~~~l~~~-~~-----~~i~v~d~~~~--~-~~~~~~~~~~v 232 (393)
|++|++.+++. ...+.... .. ..+.+++++|+.. .+ ..|.+||+.++ + ...+..+...+
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 89999987752 23333322 12 2345688877754 33 38999999877 4 44555544444
Q ss_pred EEEEE-eCCEEEEEeC----CCcEEEEEeccCCccccCceeecCceeeEEEEEEcCC-EEEEecCCCcEEEeeCC-Ccce
Q 016224 233 YAMAV-GNDLLFAGTQ----DGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGAN-KLYSGSMDNSIRVWNLE-TLQC 305 (393)
Q Consensus 233 ~~l~~-~~~~l~~~~~----dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~l~sg~~dg~i~iwd~~-~~~~ 305 (393)
....+ ..+.|+..+. ++.|.+||+..... .....+..+...+..+++.++ ++++...|+..+||.+. +++.
T Consensus 320 ~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 320 WDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP--RFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEECSSSSC--EEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCE
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCcc--ccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCc
Confidence 43323 3346665554 34599999876420 112223334445666777655 57777788887777554 4566
Q ss_pred eeEecc-CccceEEEEEc--CC-EEEEEe---CCCcEEEEEcCCCc
Q 016224 306 IQTLTE-HTSVVMSLLCW--DQ-FLLSCS---LDKTIKVWFATDSG 344 (393)
Q Consensus 306 ~~~~~~-~~~~v~~l~~~--~~-~l~s~s---~dg~i~iwd~~~~~ 344 (393)
+..+.. +...+..+.++ ++ ++++.+ ..++|++||+.+++
T Consensus 398 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 398 AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 666664 35667777776 44 333333 34789999987654
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=1.3e-08 Score=91.97 Aligned_cols=255 Identities=13% Similarity=0.074 Sum_probs=153.3
Q ss_pred eEEeeEecC-cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEec
Q 016224 112 ILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL 190 (393)
Q Consensus 112 i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~ 190 (393)
+..+....+ .+++++.+ |..+|. ++ +.+..+...........+. +..|+.++.++.|..+|.. ++.......
T Consensus 62 ~~~~~~~~~g~l~v~t~~--l~~~d~-~g-~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~ 134 (330)
T 3hxj_A 62 ECRPSIGKDGTIYFGSDK--VYAINP-DG-TEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKT 134 (330)
T ss_dssp EECCEETTTTEECCSSCE--EEEECC-CG-GGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEEC
T ss_pred ccceEEecCCcEEEecCc--EEEECC-CC-cEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcC
Confidence 345555444 44556555 888886 44 2222222222222233333 5578888889999999998 777766655
Q ss_pred CCce-EE-EE-eCCCEEEEEcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCCccccC
Q 016224 191 GGEV-GC-MI-SEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEP 265 (393)
Q Consensus 191 ~~~~-~~-~~-~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~ 265 (393)
.... .. .. .++.+++.+.++.|..+|.. ++.. ........+.++...++ .+.+++ +.|..+| .++. .
T Consensus 135 ~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~----~ 206 (330)
T 3hxj_A 135 KKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGT----E 206 (330)
T ss_dssp SSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSC----E
T ss_pred CCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCc----E
Confidence 4332 11 22 35666655567899999998 6654 44444455666777554 666666 8899998 4442 2
Q ss_pred ceeecCceeeEEEEEEcCC-EEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc-CCEEEEEeCCCcEEEEEcCCC
Q 016224 266 AASLKGHSLAVVSLVVGAN-KLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDS 343 (393)
Q Consensus 266 ~~~~~~~~~~v~~l~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~ 343 (393)
..........+.++..+++ .|+.++.++.|..+|. +++.+..+......+..+... +..|..++.++.|..+|. ++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g 284 (330)
T 3hxj_A 207 KWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DG 284 (330)
T ss_dssp EEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TS
T ss_pred EEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CC
Confidence 2222333344566666644 7888888888999984 566666665544444455556 667888899999999996 45
Q ss_pred cceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 344 GNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 344 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
+........ ...+.++.... ++ .|..++.+|.+++...+.
T Consensus 285 ~~~~~~~~~--~~~~~~~~~d~---~g-~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 285 TEKWNFETG--SWIIATPVIDE---NG-TIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CEEEEEECS--SCCCSCCEECT---TC-CEEEECTTSCEEEEEC--
T ss_pred cEEEEEEcC--CccccceEEcC---CC-EEEEEcCCCeEEEEeccc
Confidence 444433322 22233333322 22 377789999999987654
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.98 E-value=1.3e-10 Score=107.45 Aligned_cols=184 Identities=15% Similarity=0.053 Sum_probs=96.6
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEE-EeC
Q 016224 161 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMA-VGN 239 (393)
Q Consensus 161 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~-~~~ 239 (393)
++..|++++.||.|..||..+|+.+..+.. .. +.+.. ...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~--------------------------------------~~s~p~~~~ 48 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DP--------------------------------------VLQVPTHVE 48 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CC--------------------------------------SCCCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CC--------------------------------------ceecceEcC
Confidence 567889999999999999999988766543 11 11111 112
Q ss_pred C-EEEEEeCCCcEEEEEeccCCccccCceeecC--ceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccce
Q 016224 240 D-LLFAGTQDGAILAWKFNVTTNCFEPAASLKG--HSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVV 316 (393)
Q Consensus 240 ~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v 316 (393)
+ .+++++.|+.|+.||..+++..+........ ...++ + ..++.+++++.|+.|+.||.++|+.+.++..+...
T Consensus 49 g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~--~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~- 124 (369)
T 2hz6_A 49 EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC--R-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFAD- 124 (369)
T ss_dssp -CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC--C------CCCCEEEEEEEEECCC---------------
T ss_pred CCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce--E-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcc-
Confidence 2 5666688999999998776432211111000 01111 1 13567888889999999999999998888765421
Q ss_pred EEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 317 MSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 317 ~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
.....+..+++++.|+.|+.||.++++.+..+..... ....+..+......+++++.||.|+.||..+|++
T Consensus 125 -~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 125 -SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred -cccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc----cCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 1222577889999999999999998876555432211 1111111110012577788999999999998875
No 224
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=1e-07 Score=94.86 Aligned_cols=264 Identities=14% Similarity=0.116 Sum_probs=163.0
Q ss_pred ecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCC----------E-EEEEecCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 016224 118 VQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKV----------V-SGITLPSGSDKLYSGSKDETVRVWDCASGQCAG 186 (393)
Q Consensus 118 ~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~----------I-~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 186 (393)
..+.+++++.++.|+.+|..++ +.+-++...... + ..+++ .+..|+.++.|+.|..+|..+|+.+.
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASG-KELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTC-CEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ECCEEEEECCCCeEEEEECCCC-hhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEee
Confidence 4566777888999999999999 666666533211 0 11222 35678889999999999999999998
Q ss_pred EEecCCc-----e--EEEEeCCCEEEEEc------CCeEEEEECCCCcee-eecCC---CC-------------------
Q 016224 187 VINLGGE-----V--GCMISEGPWIFIGV------TNFVKAWNTQTNTDL-SLSGP---VG------------------- 230 (393)
Q Consensus 187 ~~~~~~~-----~--~~~~~~~~~l~~~~------~~~i~v~d~~~~~~~-~~~~~---~~------------------- 230 (393)
.+..... + ..+..++.+++... ++.|..+|..+++.+ .+... ..
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred eeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 8876321 1 11223444433322 478999999999987 33210 00
Q ss_pred ---------cEEEEEEeCC--EEEEEeCCC-------------------cEEEEEeccCCccccCceeecCce-------
Q 016224 231 ---------QVYAMAVGND--LLFAGTQDG-------------------AILAWKFNVTTNCFEPAASLKGHS------- 273 (393)
Q Consensus 231 ---------~v~~l~~~~~--~l~~~~~dg-------------------~I~vwd~~~~~~~~~~~~~~~~~~------- 273 (393)
....++++++ +++.++.++ .|..+|..++...+... ...|.
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~--~~~~~~wd~~~~ 299 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ--VTPGDSWDFTAT 299 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE--SSTTCCSCCCCC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEee--cCCCccccccCC
Confidence 0113567664 777877766 38899988875433211 11111
Q ss_pred e--eEEEEEEcCC---EEEEecCCCcEEEeeCCCcceeeEeccCcc------------ce--------------------
Q 016224 274 L--AVVSLVVGAN---KLYSGSMDNSIRVWNLETLQCIQTLTEHTS------------VV-------------------- 316 (393)
Q Consensus 274 ~--~v~~l~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~------------~v-------------------- 316 (393)
. ....+..+++ .++.++.+|.++++|.++++.+..+..... ++
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G 379 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFG 379 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTC
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcc
Confidence 1 2234455665 689999999999999999998854432110 00
Q ss_pred ----EEEEEcC--CEEEE------------------------------------EeCCCcEEEEEcCCCcceEEEEeecC
Q 016224 317 ----MSLLCWD--QFLLS------------------------------------CSLDKTIKVWFATDSGNLEVTYTHNE 354 (393)
Q Consensus 317 ----~~l~~~~--~~l~s------------------------------------~s~dg~i~iwd~~~~~~~~~~~~~~~ 354 (393)
..+++++ ..++. ...+|.|..||+.+++.+........
T Consensus 380 ~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~ 459 (668)
T 1kv9_A 380 AHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH 459 (668)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS
T ss_pred ccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC
Confidence 0123331 22222 11348899999998877655543221
Q ss_pred CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 355 EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 355 ~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
.........+. +++.++.||.|+.||..++++
T Consensus 460 ---~~~~~~~t~gg---~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 460 ---WNGGTLSTAGN---LVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp ---CCCCEEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred ---CcCceeEeCCC---EEEEECCcccchhhhhhcChh
Confidence 11111112222 788899999999999999875
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.97 E-value=6.5e-07 Score=77.76 Aligned_cols=206 Identities=11% Similarity=0.028 Sum_probs=138.2
Q ss_pred EEEEEecCCcC--CEEEEEecCCCCEEEEEeC--CCcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEE
Q 016224 141 KLLTQLEGHQK--VVSGITLPSGSDKLYSGSK--DETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWN 216 (393)
Q Consensus 141 ~~~~~l~~h~~--~I~~i~~s~~~~~l~s~s~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d 216 (393)
+.+.++. |.. ....|+|++++.+.++.+. ++.|.+.|+.+++.+..+..+.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~------------------------ 64 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD------------------------ 64 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT------------------------
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC------------------------
Confidence 5666664 543 4689999998644444443 5799999999999887765322
Q ss_pred CCCCceeeecCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcE
Q 016224 217 TQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSI 295 (393)
Q Consensus 217 ~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i 295 (393)
......+++.++ ++++.-.++.+.++|..+. +.+..+......-..++++++.++++..++.|
T Consensus 65 ------------~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~----~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l 128 (266)
T 2iwa_A 65 ------------SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTL----SNIKNFTHQMKDGWGLATDGKILYGSDGTSIL 128 (266)
T ss_dssp ------------TCCEEEEEEETTEEEEEETTCSEEEEEETTTT----EEEEEEECCSSSCCEEEECSSSEEEECSSSEE
T ss_pred ------------CcceEEEEEeCCEEEEEEecCCEEEEEECCCC----cEEEEEECCCCCeEEEEECCCEEEEECCCCeE
Confidence 112234556666 4444456788999998765 33333321111224578888877777778999
Q ss_pred EEeeCCCcceeeEeccCc--c---ceEEEEEcCCEEEEEe-CCCcEEEEEcCCCcceEEEEeec-----------CCccE
Q 016224 296 RVWNLETLQCIQTLTEHT--S---VVMSLLCWDQFLLSCS-LDKTIKVWFATDSGNLEVTYTHN-----------EEHGV 358 (393)
Q Consensus 296 ~iwd~~~~~~~~~~~~~~--~---~v~~l~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v 358 (393)
.++|..+.+.+.++.... . ....+.+.+..+.+.. .++.|.+.|..+++.+..+.... .....
T Consensus 129 ~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~ 208 (266)
T 2iwa_A 129 YEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVL 208 (266)
T ss_dssp EEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCE
T ss_pred EEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCce
Confidence 999999999888876322 1 2456666655555444 57899999999988777776421 11245
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 359 LALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 359 ~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
..+++.|+. +++++++...+.|.+.++..
T Consensus 209 nGIa~~~~~--~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 209 NGIAWDQEN--KRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEEETTT--TEEEEEETTCSEEEEEEEEE
T ss_pred EEEEEcCCC--CEEEEECCCCCeEEEEEEec
Confidence 788888774 45788888889999888754
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.95 E-value=1.9e-07 Score=87.12 Aligned_cols=233 Identities=10% Similarity=0.015 Sum_probs=149.6
Q ss_pred EeeEecCc--EEEec----------CCCeEEEEECCCCcEEEEEecCC-------cCCEEEEEecCCCCEEEEEeC--CC
Q 016224 114 CRNWVQGN--CMYGE----------KCKFLHSWTVGDGFKLLTQLEGH-------QKVVSGITLPSGSDKLYSGSK--DE 172 (393)
Q Consensus 114 c~~~~~~~--~~~g~----------~dg~i~vwd~~~~~~~~~~l~~h-------~~~I~~i~~s~~~~~l~s~s~--dg 172 (393)
-+.+++++ ++++. .++.|.++|..+. +.+.++.-- ...-..++|+||+++|+.+.. ++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~ 200 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAP 200 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC-cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCC
Confidence 57777763 33333 4678999999998 777766421 123456889999999999875 57
Q ss_pred cEEEEECCCCeEEEEEecCCceEEEEeC--CCEEEEEcCCeEEEEECCCCceeee-----cCCCCcE-EEEEEeCC--EE
Q 016224 173 TVRVWDCASGQCAGVINLGGEVGCMISE--GPWIFIGVTNFVKAWNTQTNTDLSL-----SGPVGQV-YAMAVGND--LL 242 (393)
Q Consensus 173 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~i~v~d~~~~~~~~~-----~~~~~~v-~~l~~~~~--~l 242 (393)
.|.+.|+.+++.+..+...... .+.++ ..++....++.+.+.+..+++.... .....++ ..+.+.++ .+
T Consensus 201 ~VsVID~~t~kvv~~I~v~g~~-~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~ 279 (426)
T 3c75_H 201 AVGVVDLEGKTFDRMLDVPDCY-HIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRL 279 (426)
T ss_dssp EEEEEETTTTEEEEEEECCSEE-EEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEE
T ss_pred eEEEEECCCCeEEEEEEcCCce-eeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEE
Confidence 8999999999999999876542 23332 2334455778887778755554311 1111111 12345555 55
Q ss_pred EEEeCCCcEEEEEeccCCccccCceee----------cCceeeEEEEEEcCCEEEEecC----------CCcEEEeeCCC
Q 016224 243 FAGTQDGAILAWKFNVTTNCFEPAASL----------KGHSLAVVSLVVGANKLYSGSM----------DNSIRVWNLET 302 (393)
Q Consensus 243 ~~~~~dg~I~vwd~~~~~~~~~~~~~~----------~~~~~~v~~l~~~~~~l~sg~~----------dg~i~iwd~~~ 302 (393)
+..+..+.|.+.|+............+ .........+..+++++++... ++.|.++|+.+
T Consensus 280 ~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T 359 (426)
T 3c75_H 280 VWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET 359 (426)
T ss_dssp EEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred EEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC
Confidence 555678899999986543110000000 0011112355666676655432 35799999999
Q ss_pred cceeeEeccCccceEEEEEc--CC-EEEEEe-CCCcEEEEEcCCCcceEEE
Q 016224 303 LQCIQTLTEHTSVVMSLLCW--DQ-FLLSCS-LDKTIKVWFATDSGNLEVT 349 (393)
Q Consensus 303 ~~~~~~~~~~~~~v~~l~~~--~~-~l~s~s-~dg~i~iwd~~~~~~~~~~ 349 (393)
.+.+.++.... ....+.++ ++ ++++.. .++.|.++|+.+.+.+..+
T Consensus 360 ~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 360 GERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999986433 35667776 66 787777 5999999999988877665
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.94 E-value=1.7e-06 Score=78.13 Aligned_cols=202 Identities=11% Similarity=0.022 Sum_probs=127.8
Q ss_pred EEeeEecC--cEE-EecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 113 LCRNWVQG--NCM-YGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 113 ~c~~~~~~--~~~-~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
....|+++ .++ +...++.|.+||..++ +.. .+. ....+.+++|+++++++++. .+ .|.+||..+++......
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~-~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASG-RKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTT-EEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCC-cEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 45567764 333 5667889999999887 332 233 34689999999999877754 44 49999998887654433
Q ss_pred cCC-----ceEE--EEeCCCEEEEEcC-------CeEEEEECCCCceeeecCCCCcEEEEEEeCC--EE-EEEeCCCcEE
Q 016224 190 LGG-----EVGC--MISEGPWIFIGVT-------NFVKAWNTQTNTDLSLSGPVGQVYAMAVGND--LL-FAGTQDGAIL 252 (393)
Q Consensus 190 ~~~-----~~~~--~~~~~~~l~~~~~-------~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l-~~~~~dg~I~ 252 (393)
... .+.. +.++++++++... +.|..++ +++...+.........++|+++ .| ++.+.++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 211 1222 2357777665432 3566666 4544433333445778999987 44 4555678999
Q ss_pred EEEec--cC-Cccc-cCceeecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc
Q 016224 253 AWKFN--VT-TNCF-EPAASLKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW 322 (393)
Q Consensus 253 vwd~~--~~-~~~~-~~~~~~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 322 (393)
+||+. ++ .... +....+.........+.++ +++.++...++.|.+||. +++.+..+..+...+.+++|.
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence 99986 33 2110 1111222223345567775 555555556788999998 677778887777778999987
No 228
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.94 E-value=8.1e-07 Score=83.01 Aligned_cols=220 Identities=14% Similarity=0.089 Sum_probs=137.6
Q ss_pred ceEEeeEecCcE-EE-ecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCC--cEEEEECCCCeEEE
Q 016224 111 DILCRNWVQGNC-MY-GEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE--TVRVWDCASGQCAG 186 (393)
Q Consensus 111 ~i~c~~~~~~~~-~~-g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg--~v~iwd~~~~~~~~ 186 (393)
....++|.+++. +. ...++.|++||..++ ++........ ... ++|+++++.|+++..++ .|.+|+..++....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g-~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDN-KVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTT-EEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCC-EEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 456777876643 33 445689999999887 5554444432 233 99999999999998876 78999887665444
Q ss_pred EE----e-cCCc--eEEEEe-CCCEEEEEcCCeEEEEECCCCceeee-----cCCCCcE-E-EEEEeCC---EEEEEeCC
Q 016224 187 VI----N-LGGE--VGCMIS-EGPWIFIGVTNFVKAWNTQTNTDLSL-----SGPVGQV-Y-AMAVGND---LLFAGTQD 248 (393)
Q Consensus 187 ~~----~-~~~~--~~~~~~-~~~~l~~~~~~~i~v~d~~~~~~~~~-----~~~~~~v-~-~l~~~~~---~l~~~~~d 248 (393)
.+ . .... ...+.+ ++.++++..++.|..||..++....+ .+....- . .++++++ ++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 44 1 1111 223334 44445544667899999988765433 2222222 3 8999984 55666678
Q ss_pred CcEEEEEeccCCccccCceeecCc---------------eeeEEEEEEc--CCEEEEec-CCCcEEEeeCCCcceeeEec
Q 016224 249 GAILAWKFNVTTNCFEPAASLKGH---------------SLAVVSLVVG--ANKLYSGS-MDNSIRVWNLETLQCIQTLT 310 (393)
Q Consensus 249 g~I~vwd~~~~~~~~~~~~~~~~~---------------~~~v~~l~~~--~~~l~sg~-~dg~i~iwd~~~~~~~~~~~ 310 (393)
+.|+.|+..... ..+.++ -.....++++ ++++++-. .++.|+.||+.+++. .++.
T Consensus 289 ~~I~~~~~~g~~------~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~ 361 (409)
T 3hrp_A 289 SSVYKITPDGEC------EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVA 361 (409)
T ss_dssp TEEEEECTTCCE------EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEE
T ss_pred CEEEEEecCCCE------EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEe
Confidence 889999865431 111111 1234566765 56677777 789999999877764 4443
Q ss_pred cC---------------ccceEEEEEc--CCEEEEEeCCCcEEEEEc
Q 016224 311 EH---------------TSVVMSLLCW--DQFLLSCSLDKTIKVWFA 340 (393)
Q Consensus 311 ~~---------------~~~v~~l~~~--~~~l~s~s~dg~i~iwd~ 340 (393)
++ -.....++++ +.++++-..++.|+.+++
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 33 1345777777 345555566677777664
No 229
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.92 E-value=5.6e-07 Score=87.77 Aligned_cols=266 Identities=11% Similarity=0.042 Sum_probs=159.4
Q ss_pred ecCcEEEecC-CCeEEEEEC-CCCcEEEEEecCCcC-C---------E-EEEEecCCCCEEEEEeCCCcEEEEECCCCeE
Q 016224 118 VQGNCMYGEK-CKFLHSWTV-GDGFKLLTQLEGHQK-V---------V-SGITLPSGSDKLYSGSKDETVRVWDCASGQC 184 (393)
Q Consensus 118 ~~~~~~~g~~-dg~i~vwd~-~~~~~~~~~l~~h~~-~---------I-~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 184 (393)
..+.+++++. ++.|+-+|. .++ +.+-++..... . + ..+++ .+..|+.++.|+.|..+|..+|+.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPG-KIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTT-SEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCc-cEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCE
Confidence 3566677777 899999999 898 56555543211 0 0 11222 356888889999999999999999
Q ss_pred EEEEecCC-----ce--EEEEeCCCEEEEEc------CCeEEEEECCCCcee-eecCCCCc-------------------
Q 016224 185 AGVINLGG-----EV--GCMISEGPWIFIGV------TNFVKAWNTQTNTDL-SLSGPVGQ------------------- 231 (393)
Q Consensus 185 ~~~~~~~~-----~~--~~~~~~~~~l~~~~------~~~i~v~d~~~~~~~-~~~~~~~~------------------- 231 (393)
+..+.... .+ ..+..++.+++... ++.|..+|..+++.+ ........
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 98877543 11 11223444444333 689999999999876 32221100
Q ss_pred ------------------E-EEEEEeCC--EEEEEeCC----------------CcEEEEEeccCCccccCcee------
Q 016224 232 ------------------V-YAMAVGND--LLFAGTQD----------------GAILAWKFNVTTNCFEPAAS------ 268 (393)
Q Consensus 232 ------------------v-~~l~~~~~--~l~~~~~d----------------g~I~vwd~~~~~~~~~~~~~------ 268 (393)
+ ..++++++ .++.++.+ +.|..+|..++...+.....
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 0 12455554 66665532 35889998887543221110
Q ss_pred ecCceeeE-EEEEEcCC---EEEEecCCCcEEEeeCCCcceeeEeccCc-------------cce---------------
Q 016224 269 LKGHSLAV-VSLVVGAN---KLYSGSMDNSIRVWNLETLQCIQTLTEHT-------------SVV--------------- 316 (393)
Q Consensus 269 ~~~~~~~v-~~l~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v--------------- 316 (393)
......++ .....+++ .++.++.+|.+.++|.++++.+..+.... .++
T Consensus 298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 377 (571)
T 2ad6_A 298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTN 377 (571)
T ss_dssp CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEE
T ss_pred cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceE
Confidence 00112222 22334563 57788899999999999999887664321 111
Q ss_pred -----------EEEEEc--CCEEEEEe-------------------------------------CCCcEEEEEcCCCcce
Q 016224 317 -----------MSLLCW--DQFLLSCS-------------------------------------LDKTIKVWFATDSGNL 346 (393)
Q Consensus 317 -----------~~l~~~--~~~l~s~s-------------------------------------~dg~i~iwd~~~~~~~ 346 (393)
..++++ ..+|++.. .++.|..||+.+++.+
T Consensus 378 ~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~ 457 (571)
T 2ad6_A 378 ICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAK 457 (571)
T ss_dssp ESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEE
T ss_pred ECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEE
Confidence 112333 23444332 3578999999888776
Q ss_pred EEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 347 EVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 347 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
........ +........ ++ +++.++.||.|+.||..+|++
T Consensus 458 W~~~~~~~---~~~~~~~t~--gg-~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 458 WTKWEKFA---AWGGTLYTK--GG-LVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EEEEESSC---CCSBCEEET--TT-EEEEECTTSEEEEEETTTCCE
T ss_pred EEecCCCC---ccceeEEEC--CC-EEEEEcCCCeEEEEECCCCCE
Confidence 55543221 111111111 22 677799999999999999976
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.91 E-value=6.7e-06 Score=74.20 Aligned_cols=214 Identities=14% Similarity=0.061 Sum_probs=126.9
Q ss_pred CEEEEEecCCCC-EEEEEeCCCcEEEEECCCCeEEEEEecCCceEEE--EeCCCEEEEEcCCeEEEEECCCCceeeecCC
Q 016224 152 VVSGITLPSGSD-KLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDLSLSGP 228 (393)
Q Consensus 152 ~I~~i~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~ 228 (393)
...+..|+|++. ++++...++.|.+||..+++.. .+.....+..+ .++++++++. ...|.+||..+++...+...
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECS
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeC
Confidence 345678999754 5556667889999999887653 34444445443 3577776665 45699999988876533221
Q ss_pred -----CCcEEEEEEeCC-EEEEEeC-------CCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEE-EEecCC
Q 016224 229 -----VGQVYAMAVGND-LLFAGTQ-------DGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKL-YSGSMD 292 (393)
Q Consensus 229 -----~~~v~~l~~~~~-~l~~~~~-------dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~sg~~d 292 (393)
...+..+.++++ .+++++. .+.|..++ .+ +. ..+..+......++++ ++.+ ++.+.+
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g----~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG----KV-TKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT----EE-EEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC----cE-EEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 236889999988 3333332 23455554 22 11 1111122234566665 5555 445567
Q ss_pred CcEEEeeCC--Cc-ce-----eeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEE
Q 016224 293 NSIRVWNLE--TL-QC-----IQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALC 362 (393)
Q Consensus 293 g~i~iwd~~--~~-~~-----~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 362 (393)
+.|.+||+. ++ +. +..+.........+.++ +.+.++...++.|.+||. +++.+..+.... ..+.+++
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~--~~~~~~a 277 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG--KQTTCPA 277 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC--SBEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC--CCcEEEE
Confidence 899999986 55 32 22333334455677776 556666656789999998 455444443322 3478888
Q ss_pred ee-eCCCCCcEEEEEeCC
Q 016224 363 GM-PDSEGKPVLLCSCND 379 (393)
Q Consensus 363 ~~-~~~~~~~~l~s~s~d 379 (393)
|. ++.. .++++...+
T Consensus 278 f~g~d~~--~L~vt~~~~ 293 (326)
T 2ghs_A 278 FIGPDAS--RLLVTSARE 293 (326)
T ss_dssp EESTTSC--EEEEEEBCT
T ss_pred EecCCCC--EEEEEecCC
Confidence 87 5432 233444444
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.91 E-value=5.3e-07 Score=80.63 Aligned_cols=212 Identities=12% Similarity=0.070 Sum_probs=132.5
Q ss_pred ceEEeeEecCc---EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 016224 111 DILCRNWVQGN---CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGV 187 (393)
Q Consensus 111 ~i~c~~~~~~~---~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 187 (393)
......|.+++ ++++..++.|..|+.. + + ...+..+...+..++++++++++++...++.|.+|+.+ ++....
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g-~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G-T-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETT-S-C-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCC-C-C-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 34566777653 3467788999999984 4 2 23444566789999999999966665566889999986 554332
Q ss_pred EecCC-------ceEEEEeCCCEEEE----Ec--------------CCeEEEEECCCCceeeecCCCCcEEEEEEeCC--
Q 016224 188 INLGG-------EVGCMISEGPWIFI----GV--------------TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-- 240 (393)
Q Consensus 188 ~~~~~-------~~~~~~~~~~~l~~----~~--------------~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~-- 240 (393)
..... ....+.+++.+.++ +. .+.|..++..+++...+. .......++|+++
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~ 200 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQ 200 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSS
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCC
Confidence 22111 11334467887775 21 246788887777655444 5566788999998
Q ss_pred EEEEEeCC------CcEEEEEeccCCccccCceee-cCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEecc
Q 016224 241 LLFAGTQD------GAILAWKFNVTTNCFEPAASL-KGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTE 311 (393)
Q Consensus 241 ~l~~~~~d------g~I~vwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 311 (393)
.|+++... +.|.+|++..... .....+ .........+.++ ++ |+++..++ |.+||. +++.+..+..
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~l--~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~g-v~~~~~-~g~~~~~~~~ 275 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGAL--HDRRHFASVPDGLPDGFCVDRGGW-LWSSSGTG-VCVFDS-DGQLLGHIPT 275 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTEE--EEEEEEECCSSSCCCSEEECTTSC-EEECCSSE-EEEECT-TSCEEEEEEC
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCCc--cCCeEEEECCCCCCCeEEECCCCC-EEEecCCc-EEEECC-CCCEEEEEEC
Confidence 56666554 7899999875420 000111 0011122334554 55 55555554 999998 5777777765
Q ss_pred CccceEEEEEc--CCEEEEEeCCC
Q 016224 312 HTSVVMSLLCW--DQFLLSCSLDK 333 (393)
Q Consensus 312 ~~~~v~~l~~~--~~~l~s~s~dg 333 (393)
+. .+.+++|. ++.|+.++.++
T Consensus 276 ~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 276 PG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp SS-CCCEEEECTTSCEEEEEETTE
T ss_pred CC-ceeEEEEeCCCCEEEEEcCCe
Confidence 55 47788885 55677666654
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.90 E-value=2.7e-07 Score=92.43 Aligned_cols=228 Identities=14% Similarity=0.146 Sum_probs=136.9
Q ss_pred cceEEeeEecCcE-EE------ecCCCeEEEEECCCCcEEEE-EecCCcCCEEEEEecCCCCEEEEEeCCCc--------
Q 016224 110 TDILCRNWVQGNC-MY------GEKCKFLHSWTVGDGFKLLT-QLEGHQKVVSGITLPSGSDKLYSGSKDET-------- 173 (393)
Q Consensus 110 ~~i~c~~~~~~~~-~~------g~~dg~i~vwd~~~~~~~~~-~l~~h~~~I~~i~~s~~~~~l~s~s~dg~-------- 173 (393)
..+....|++++. ++ |+....|++||+.++ +.+. .+... ....++|+ |++.|+.++.+..
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg-~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK-QPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC-SEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC-CCCccccCCc--eeccEEEe-CCCEEEEEEecCccccccccc
Confidence 3567778998853 22 334468999999998 4333 22211 12467899 9999999988754
Q ss_pred -----EEEEECCCCeE--EEEEecCC----ce--EEEEeCCCEEEEE-c----CCeEEEEECCCC--ceeeecCCCCcEE
Q 016224 174 -----VRVWDCASGQC--AGVINLGG----EV--GCMISEGPWIFIG-V----TNFVKAWNTQTN--TDLSLSGPVGQVY 233 (393)
Q Consensus 174 -----v~iwd~~~~~~--~~~~~~~~----~~--~~~~~~~~~l~~~-~----~~~i~v~d~~~~--~~~~~~~~~~~v~ 233 (393)
|++|++.+++. ...+.... .. ..+.+++++|+.. . .+.|.++|+.++ ....+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 99999987653 33333332 12 2345688887653 2 248999999776 4445555555544
Q ss_pred EE-EEeCC-EEEEEeCC---CcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecC-CC--cEEEeeCCCcce
Q 016224 234 AM-AVGND-LLFAGTQD---GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSM-DN--SIRVWNLETLQC 305 (393)
Q Consensus 234 ~l-~~~~~-~l~~~~~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~-dg--~i~iwd~~~~~~ 305 (393)
.. ....+ +++....+ +.|..+|+..... .....+..|...+..+++++++|+.... ++ .|++||+..+.
T Consensus 285 ~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~- 361 (693)
T 3iuj_A 285 SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP--AHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKR- 361 (693)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCE-
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc--cccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCe-
Confidence 43 33344 44444443 6788999877532 1122333343333377788887766654 43 78999988543
Q ss_pred eeEecc-CccceEEEEEc--CCEEEEEeCC----CcEEEEEcCCCc
Q 016224 306 IQTLTE-HTSVVMSLLCW--DQFLLSCSLD----KTIKVWFATDSG 344 (393)
Q Consensus 306 ~~~~~~-~~~~v~~l~~~--~~~l~s~s~d----g~i~iwd~~~~~ 344 (393)
...+.. ....+..+.++ ++.|+....+ ++|..||+.+++
T Consensus 362 ~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 362 VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 444432 33455555554 3433333333 789999986554
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=9e-08 Score=86.30 Aligned_cols=212 Identities=15% Similarity=0.147 Sum_probs=145.0
Q ss_pred ecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCce-EE
Q 016224 118 VQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEV-GC 196 (393)
Q Consensus 118 ~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~-~~ 196 (393)
..+.+++++.++.|..+|.. + +.+.....+...+.++...+++. |+.++.++.|..+|.. ++....+...... ..
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~ 181 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTD-G-TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSA 181 (330)
T ss_dssp ETTEEEEECTTSEEEEECTT-S-CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSC
T ss_pred ECCEEEEEecCCEEEEEcCC-C-CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceee
Confidence 36778889999999999988 6 55555555666666777776766 6667888999999998 8777776654322 22
Q ss_pred -EE-eCCCEEEEEcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCCccccCceeecCc
Q 016224 197 -MI-SEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAASLKGH 272 (393)
Q Consensus 197 -~~-~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~ 272 (393)
.. .++.+ .++. +.|..+| .+++.. ........+.++...++ .|.+++.++.|..+|.... ........
T Consensus 182 ~~~d~~g~l-~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~-----~~~~~~~~ 253 (330)
T 3hxj_A 182 ASIGKDGTI-YFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDGT-----EKWRFKTG 253 (330)
T ss_dssp CEECTTCCE-EEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTSC-----EEEEEECS
T ss_pred eEEcCCCEE-EEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCCC-----EeEEeeCC
Confidence 22 34554 4444 8999999 565554 55545566778888877 8888888888988864321 12222222
Q ss_pred eeeEEEEEEc-CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc-CCEEEEEeCCCcEEEEEcCC
Q 016224 273 SLAVVSLVVG-ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW-DQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 273 ~~~v~~l~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~ 342 (393)
...+..+..+ ++.|+.++.++.|..+|. +++.+..+......+.++..+ +..|..++.+|.+++.....
T Consensus 254 ~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 254 KRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp SCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred CCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 2222234444 567888888989999996 677777776555666777774 56788899999999887643
No 234
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.87 E-value=1.5e-06 Score=84.81 Aligned_cols=190 Identities=12% Similarity=0.117 Sum_probs=119.2
Q ss_pred ecCcEEEecC-CCeEEEEEC-CCCcEEEEEecCCcCC-----------EEEEEecCCCCE----EEEEeCCCcEEEEECC
Q 016224 118 VQGNCMYGEK-CKFLHSWTV-GDGFKLLTQLEGHQKV-----------VSGITLPSGSDK----LYSGSKDETVRVWDCA 180 (393)
Q Consensus 118 ~~~~~~~g~~-dg~i~vwd~-~~~~~~~~~l~~h~~~-----------I~~i~~s~~~~~----l~s~s~dg~v~iwd~~ 180 (393)
..+.+++++. ++.|+-+|. .++ +.+-++...... ...++++|.+.. |+.++.|+.|..+|..
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG-~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPG-TILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTT-SEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCC-cEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 3556677777 899999999 899 666555432210 123455444444 8889999999999999
Q ss_pred CCeEEEEEecCC-----ce--EEEEeCCCEEEEEc------CCeEEEEECCCCcee-eecCCCCc---------------
Q 016224 181 SGQCAGVINLGG-----EV--GCMISEGPWIFIGV------TNFVKAWNTQTNTDL-SLSGPVGQ--------------- 231 (393)
Q Consensus 181 ~~~~~~~~~~~~-----~~--~~~~~~~~~l~~~~------~~~i~v~d~~~~~~~-~~~~~~~~--------------- 231 (393)
+|+.+....... .+ ..+..++.+++.+. ++.|+.+|.++++.+ ........
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 999998876543 11 11223454444332 689999999999876 33221110
Q ss_pred ----------------------E-EEEEEeCC--EEEEEeCC----------------CcEEEEEeccCCccccCceeec
Q 016224 232 ----------------------V-YAMAVGND--LLFAGTQD----------------GAILAWKFNVTTNCFEPAASLK 270 (393)
Q Consensus 232 ----------------------v-~~l~~~~~--~l~~~~~d----------------g~I~vwd~~~~~~~~~~~~~~~ 270 (393)
+ ..++++++ +++.++.+ +.|..+|..++...+.. ...
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~--q~~ 297 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY--QKT 297 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE--ESS
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe--ecC
Confidence 0 12344444 67776655 37889998887543221 111
Q ss_pred Cc--------eeeEE-EEE-EcC---CEEEEecCCCcEEEeeCCCcceeeEec
Q 016224 271 GH--------SLAVV-SLV-VGA---NKLYSGSMDNSIRVWNLETLQCIQTLT 310 (393)
Q Consensus 271 ~~--------~~~v~-~l~-~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~ 310 (393)
.| ..++. .+. .++ ..++.++.+|.+.++|.++++.+....
T Consensus 298 ~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 298 PHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 12 12222 222 345 357778999999999999999887654
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.83 E-value=1.1e-06 Score=75.51 Aligned_cols=184 Identities=13% Similarity=0.101 Sum_probs=123.1
Q ss_pred EEEEEecCCc--CCEEEEEecCCCCEEEEEeCCC--cEEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEE--cCCeE
Q 016224 141 KLLTQLEGHQ--KVVSGITLPSGSDKLYSGSKDE--TVRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIG--VTNFV 212 (393)
Q Consensus 141 ~~~~~l~~h~--~~I~~i~~s~~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~i 212 (393)
+.+.++. |. .-...|.|+ ++.+..+.+.+| .|+++|+++++.+..+...... ..+...+..|... .++.+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 5666774 54 335889998 666667777766 9999999999999999877653 3344455555554 47899
Q ss_pred EEEECCCCceeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecC----ce-eeEEEEEEcCCEEE
Q 016224 213 KAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKG----HS-LAVVSLVVGANKLY 287 (393)
Q Consensus 213 ~v~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~----~~-~~v~~l~~~~~~l~ 287 (393)
.+||..+.+.+........-..+++....|+.+..++.|.++|..+.. ....+.. .. ..+..+.+.+..|+
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~----v~~~I~V~~~g~~~~~lNELe~~~G~ly 185 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLT----PVRTITVTAHGEELPELNELEWVDGEIF 185 (262)
T ss_dssp EEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCS----EEEEEECEETTEECCCEEEEEEETTEEE
T ss_pred EEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCe----EEEEEEeccCCccccccceeEEECCEEE
Confidence 999999998873333333435666666666666667889999988753 2333221 11 22334555444555
Q ss_pred Eec-CCCcEEEeeCCCcceeeEeccC------------ccceEEEEEc--CCEEEEEe
Q 016224 288 SGS-MDNSIRVWNLETLQCIQTLTEH------------TSVVMSLLCW--DQFLLSCS 330 (393)
Q Consensus 288 sg~-~dg~i~iwd~~~~~~~~~~~~~------------~~~v~~l~~~--~~~l~s~s 330 (393)
+.. .+..|.+.|.++++.+..+... ....+.|+++ .+.|+..+
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 544 6889999999999998888642 1244889998 34444444
No 236
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.75 E-value=8.2e-06 Score=69.47 Aligned_cols=185 Identities=11% Similarity=0.070 Sum_probs=123.7
Q ss_pred cEEEEEecCCc--CCEEEEEecCCCCEEEEEeCCC--cEEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEE--cCCe
Q 016224 140 FKLLTQLEGHQ--KVVSGITLPSGSDKLYSGSKDE--TVRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIG--VTNF 211 (393)
Q Consensus 140 ~~~~~~l~~h~--~~I~~i~~s~~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~ 211 (393)
.+.+.++ .|. .-...+.|+. +.+..+.+.+| .|+++|+.+++.+..+..+... ..+...+..|... .++.
T Consensus 9 ~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 9 YRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE
T ss_pred eEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCE
Confidence 3666777 354 4577999986 55566666654 8999999999999999877553 3334445555544 5789
Q ss_pred EEEEECCCCceeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecC--ce---eeEEEEEEcCCEE
Q 016224 212 VKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKG--HS---LAVVSLVVGANKL 286 (393)
Q Consensus 212 i~v~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~--~~---~~v~~l~~~~~~l 286 (393)
+.+||..+.+.+........-..++.....|+++..++.|.++|..+.. .+..+.- +. ..+..+.+.+..+
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~----~~~~I~V~~~g~~~~~lNeLe~~~G~l 162 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQ----QVGSIKVTAGGRPLDNLNELEWVNGEL 162 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEEEEEETTEE
T ss_pred EEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCe----EEEEEEEccCCcccccceeeEEeCCEE
Confidence 9999999998883333333446777766677777778999999988753 2333322 11 2345566655555
Q ss_pred EEec-CCCcEEEeeCCCcceeeEeccC-------------ccceEEEEEc--CCEEEEEe
Q 016224 287 YSGS-MDNSIRVWNLETLQCIQTLTEH-------------TSVVMSLLCW--DQFLLSCS 330 (393)
Q Consensus 287 ~sg~-~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~--~~~l~s~s 330 (393)
++.. .+..|.+.|.++++.+..+... ....+.|+++ ++.|+..+
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 5544 6789999999999998887622 1245889988 34444433
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.72 E-value=6e-06 Score=82.13 Aligned_cols=236 Identities=11% Similarity=0.068 Sum_probs=144.1
Q ss_pred eEecCcEEEecCCCeEEEEECCCCcEEEEEecCCc-CCEEEEEecC--CCCEEEEEeC------CCcEEEEECCCCeEEE
Q 016224 116 NWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQ-KVVSGITLPS--GSDKLYSGSK------DETVRVWDCASGQCAG 186 (393)
Q Consensus 116 ~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~-~~I~~i~~s~--~~~~l~s~s~------dg~v~iwd~~~~~~~~ 186 (393)
....+.+++++.|+.|+.+|..++ +.+..+.... .....+..+| .+..++.+.. +|.|..+|..+|+.+.
T Consensus 114 ~~~~~~v~v~~~dg~l~alD~~tG-~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 114 ALWGDKVYVGTLDGRLIALDAKTG-KAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EEEBTEEEEECTTSEEEEEETTTC-CEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEECCEEEEEcCCCEEEEEECCCC-CEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 345677888999999999999999 6665554321 0000011111 1345555543 5899999999999998
Q ss_pred EEecCC--c--------------------------------eEEEEeCCCEEEEEc-CC-------------------eE
Q 016224 187 VINLGG--E--------------------------------VGCMISEGPWIFIGV-TN-------------------FV 212 (393)
Q Consensus 187 ~~~~~~--~--------------------------------~~~~~~~~~~l~~~~-~~-------------------~i 212 (393)
.+.... . ...+.+...+++++. ++ .|
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 886421 0 012334566777663 22 49
Q ss_pred EEEECCCCcee-eecC--CC-------CcE--EEEEEeCC---EEEEEeCCCcEEEEEeccCCccccCc-------eeec
Q 016224 213 KAWNTQTNTDL-SLSG--PV-------GQV--YAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPA-------ASLK 270 (393)
Q Consensus 213 ~v~d~~~~~~~-~~~~--~~-------~~v--~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~~~~-------~~~~ 270 (393)
..+|..+++.+ .... |. .+. ..+.+... .+++++.+|.++++|..+++...... ..+.
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 99999999987 3322 21 222 23334443 68889999999999988875321000 0000
Q ss_pred -Cceee--------------------------EEEEEEcCCEEEE-----------------------------------
Q 016224 271 -GHSLA--------------------------VVSLVVGANKLYS----------------------------------- 288 (393)
Q Consensus 271 -~~~~~--------------------------v~~l~~~~~~l~s----------------------------------- 288 (393)
....+ -.++.....+++.
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 00000 0112222233332
Q ss_pred -ecCCCcEEEeeCCCcceeeEeccCccce-EEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEee
Q 016224 289 -GSMDNSIRVWNLETLQCIQTLTEHTSVV-MSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTH 352 (393)
Q Consensus 289 -g~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 352 (393)
...+|.|..||+.+++.+.++..+.... ..+...+.+++.++.|+.|+.||.++++.+..+...
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 1234889999999999988776543322 345556889999999999999999998887766553
No 238
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.71 E-value=6.7e-06 Score=80.29 Aligned_cols=189 Identities=11% Similarity=0.076 Sum_probs=116.3
Q ss_pred ecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCC-E--------EEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 118 VQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKV-V--------SGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 118 ~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~-I--------~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
..+.+++++.++.|+-+|..++ +.+-++...... . ..+++ .+..|+.++.|+.|..+|..+|+.+...
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG-~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTG-KRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKK 143 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSC-CEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred ECCEEEEEcCCCCEEEEECCCC-cEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeee
Confidence 4556666776555999999999 666555433211 0 11222 3567888999999999999999999887
Q ss_pred ecCCc-----e--EEEEeCC----C-EEEEEc-------CCeEEEEECCCCcee-eecCCCCcE----------------
Q 016224 189 NLGGE-----V--GCMISEG----P-WIFIGV-------TNFVKAWNTQTNTDL-SLSGPVGQV---------------- 232 (393)
Q Consensus 189 ~~~~~-----~--~~~~~~~----~-~l~~~~-------~~~i~v~d~~~~~~~-~~~~~~~~v---------------- 232 (393)
..... + ..+..++ + .++++. ++.|..+|..+++.+ ........+
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 65431 1 1112222 2 555543 679999999999876 222110000
Q ss_pred -------------------------EEEEEeCC--EEEEEeC--------------------C----CcEEEEEeccCCc
Q 016224 233 -------------------------YAMAVGND--LLFAGTQ--------------------D----GAILAWKFNVTTN 261 (393)
Q Consensus 233 -------------------------~~l~~~~~--~l~~~~~--------------------d----g~I~vwd~~~~~~ 261 (393)
..++++++ ++++++. | +.|..+|..+++.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 12445554 6665552 2 5799999988754
Q ss_pred cccCceeecCc--------eeeEEE-EE-EcCC---EEEEecCCCcEEEeeCCCcceeeEecc
Q 016224 262 CFEPAASLKGH--------SLAVVS-LV-VGAN---KLYSGSMDNSIRVWNLETLQCIQTLTE 311 (393)
Q Consensus 262 ~~~~~~~~~~~--------~~~v~~-l~-~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~ 311 (393)
.+.. ....| ..++.. .. .+++ .++.++.+|.++++|.++++.+..+..
T Consensus 304 ~W~~--q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 304 KWFY--QHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp EEEE--ESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEEE--eCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 3321 11112 123322 11 3453 688899999999999999998876643
No 239
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.68 E-value=3e-05 Score=75.50 Aligned_cols=232 Identities=15% Similarity=0.089 Sum_probs=140.2
Q ss_pred EecCcEEEecCCCeEEEEECCCCcEEEEEec--CCcC--CEEEEEecC--CCCEEEEEeC------CCcEEEEECCCCeE
Q 016224 117 WVQGNCMYGEKCKFLHSWTVGDGFKLLTQLE--GHQK--VVSGITLPS--GSDKLYSGSK------DETVRVWDCASGQC 184 (393)
Q Consensus 117 ~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~--~h~~--~I~~i~~s~--~~~~l~s~s~------dg~v~iwd~~~~~~ 184 (393)
...+.+++++.|+.|..+|..++ +.+.+.. .+.. .+. -+| .+..++.++. ++.|..+|..+|+.
T Consensus 113 ~~~~~v~v~~~dg~l~alD~~tG-~~~W~~~~~~~~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 113 YGAGQIVKKQANGHLLALDAKTG-KINWEVEVCDPKVGSTLT---QAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp EETTEEEEECTTSEEEEEETTTC-CEEEEEECCCGGGTCBCC---SCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred EECCEEEEEeCCCEEEEEECCCC-CEEEEecCCCCCccceec---cCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 45667888999999999999999 5555443 2111 111 111 1345666654 79999999999999
Q ss_pred EEEEecCCce-----------------------------------------EEEEeCCCEEEEEcC--------------
Q 016224 185 AGVINLGGEV-----------------------------------------GCMISEGPWIFIGVT-------------- 209 (393)
Q Consensus 185 ~~~~~~~~~~-----------------------------------------~~~~~~~~~l~~~~~-------------- 209 (393)
+..+...... ..+......++.+..
T Consensus 189 ~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 189 KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCc
Confidence 9888754321 122234455655531
Q ss_pred ---CeEEEEECCCCcee-eec--CC--------CCcEE-EEEEeC---CEEEEEeCCCcEEEEEeccCCccccCcee---
Q 016224 210 ---NFVKAWNTQTNTDL-SLS--GP--------VGQVY-AMAVGN---DLLFAGTQDGAILAWKFNVTTNCFEPAAS--- 268 (393)
Q Consensus 210 ---~~i~v~d~~~~~~~-~~~--~~--------~~~v~-~l~~~~---~~l~~~~~dg~I~vwd~~~~~~~~~~~~~--- 268 (393)
+.|..+|..+++.+ ... .| ..++. ...... ..++.++.+|.++++|..+++..+.....
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~ 348 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAV 348 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTC
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCc
Confidence 25999999999877 322 22 12222 111223 25677889999999998877532211000
Q ss_pred -----ec-CceeeE--------------------------EEEEEc--CCEEEEec------------------------
Q 016224 269 -----LK-GHSLAV--------------------------VSLVVG--ANKLYSGS------------------------ 290 (393)
Q Consensus 269 -----~~-~~~~~v--------------------------~~l~~~--~~~l~sg~------------------------ 290 (393)
+. ....++ ..++++ ..+|++..
T Consensus 349 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 428 (571)
T 2ad6_A 349 NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGAT 428 (571)
T ss_dssp CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred cccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccc
Confidence 00 000000 012233 33444432
Q ss_pred -------------CCCcEEEeeCCCcceeeEeccCccce-EEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEee
Q 016224 291 -------------MDNSIRVWNLETLQCIQTLTEHTSVV-MSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTH 352 (393)
Q Consensus 291 -------------~dg~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 352 (393)
.++.|..||+.+++.+.++....... ..+...+..++.++.|+.|+.||.++++.+..+...
T Consensus 429 ~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 429 LAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp EEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 35889999999999888776432211 223345788888999999999999999887776543
No 240
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.68 E-value=0.0001 Score=74.98 Aligned_cols=269 Identities=10% Similarity=0.076 Sum_probs=165.9
Q ss_pred eEEeeEe-cCcEEEecCCCeEEEEECCCCcEEEEEe-cCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 112 ILCRNWV-QGNCMYGEKCKFLHSWTVGDGFKLLTQL-EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 112 i~c~~~~-~~~~~~g~~dg~i~vwd~~~~~~~~~~l-~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
|.++... .+.++.|+.++-|..|+..++ +..... ..+...|.+|...+++.+ ..++.++-|.+||..+++......
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~g~l-wigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQK-TFEKVIPILGTKQIQAILQQSPTRI-WVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTC-CEEECC----CCCEEEEEEEETTEE-EEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCC-eEEEecCCCCCCeeEEEEEcCCCCE-EEEECCCCeEEEeCCCCeEEEeec
Confidence 6777665 456667877666889998766 332221 224567999988777764 445555458999988776544322
Q ss_pred c--------CCceEEEEe--CCCEEEEEcCCeEEEEECCCCceeeecC--------CCCcEEEEEEeCC-EEEEEeCCCc
Q 016224 190 L--------GGEVGCMIS--EGPWIFIGVTNFVKAWNTQTNTDLSLSG--------PVGQVYAMAVGND-LLFAGTQDGA 250 (393)
Q Consensus 190 ~--------~~~~~~~~~--~~~~l~~~~~~~i~v~d~~~~~~~~~~~--------~~~~v~~l~~~~~-~l~~~~~dg~ 250 (393)
. ...+.++.. ++.+.++.. +.|.+|+..++....+.. ....|.++..+++ .|.+|+.++-
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~G 331 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWIGTF-NDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGG 331 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEEEES-SCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSC
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEEEeC-ChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCC
Confidence 1 133555543 455554444 478999988876554321 2357999998887 8888888888
Q ss_pred EEEEEeccCCccccCceee----cCceeeEEEEEEcC-CEEEEecCCCcEEEeeCCCcceeeEecc--------CccceE
Q 016224 251 ILAWKFNVTTNCFEPAASL----KGHSLAVVSLVVGA-NKLYSGSMDNSIRVWNLETLQCIQTLTE--------HTSVVM 317 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~----~~~~~~v~~l~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~--------~~~~v~ 317 (393)
|..|+...... ...... .-....|.++..+. ..|..|+.++-|..||..+++....... ....|.
T Consensus 332 l~~~~~~~~~~--~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 409 (795)
T 4a2l_A 332 LNYYHPIRNRF--KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK 409 (795)
T ss_dssp EEEECGGGGSS--EEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred eEEeCCCcccc--eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence 99998765421 111100 01234688888874 4688888888899999887654332211 235688
Q ss_pred EEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEee---cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 318 SLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTH---NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 318 ~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
++..+ +..|..|+.++-|.+||..+++ ...+... .....+.++...++ + . |..|+.+ -|.+|+..+++
T Consensus 410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~-~~~~~~~~~~l~~~~v~~i~~d~~--g-~-lwigt~~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQ-VENFNQRNSQLVNENVYAILPDGE--G-N-LWLGTLS-ALVRFNPEQRS 482 (795)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEETTTCC-EEEECTTTSCCSCSCEEEEEECSS--S-C-EEEEESS-CEEEEETTTTE
T ss_pred EEEEcCCCCEEEEEeCcCceeEEeCCCCc-EEEeecCCCCcCCCeeEEEEECCC--C-C-EEEEecC-ceeEEeCCCCe
Confidence 88876 3438888888889999987654 3332210 11234666654332 2 2 4445554 47888876643
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.67 E-value=3.3e-06 Score=72.58 Aligned_cols=182 Identities=10% Similarity=0.121 Sum_probs=122.1
Q ss_pred EEEEEecCCc--CCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEE--cCCeEEE
Q 016224 141 KLLTQLEGHQ--KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIG--VTNFVKA 214 (393)
Q Consensus 141 ~~~~~l~~h~--~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~i~v 214 (393)
+.+.++. |. .-...|.|+ ++.+..+.+.+|.|+++|+++++.+..+ ..... ..+...+..|... .++.+.+
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEE
Confidence 4555553 43 345788887 4566777888899999999999998888 65543 2344444444443 5789999
Q ss_pred EECCCCceeeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecC--ce---eeEEEEEEcCCEEEEe
Q 016224 215 WNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKG--HS---LAVVSLVVGANKLYSG 289 (393)
Q Consensus 215 ~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~--~~---~~v~~l~~~~~~l~sg 289 (393)
||..+.+.+........-..+++....|+.+..++.|.++|..+.. ....+.. +. ..+..+.+.+..|++.
T Consensus 121 ~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~----v~~~I~V~~~g~~v~~lNeLe~~dG~lyan 196 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFA----LVGAVQVKLRGQPVELINELECANGVIYAN 196 (268)
T ss_dssp EETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred EECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCe----EEEEEEeCCCCcccccccccEEeCCEEEEE
Confidence 9999999883333334446777777777777779999999987753 2333221 11 1334556644455555
Q ss_pred c-CCCcEEEeeCCCcceeeEeccC-------------ccceEEEEEcC---CEEEEE
Q 016224 290 S-MDNSIRVWNLETLQCIQTLTEH-------------TSVVMSLLCWD---QFLLSC 329 (393)
Q Consensus 290 ~-~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~l~~~~---~~l~s~ 329 (393)
. .+..|.+.|.++++.+..+... ....+.|++++ .+++||
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 4 6889999999999998887632 12458899982 355554
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.67 E-value=1.2e-05 Score=71.80 Aligned_cols=225 Identities=11% Similarity=0.045 Sum_probs=127.0
Q ss_pred EecCCcCCEEEEEecCCCC-EEEEEeCCCcEEEEECCCCeEEEEEecCCceEEE--EeCCCEEEEEc-CCeEEEEECCCC
Q 016224 145 QLEGHQKVVSGITLPSGSD-KLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIGV-TNFVKAWNTQTN 220 (393)
Q Consensus 145 ~l~~h~~~I~~i~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~-~~~i~v~d~~~~ 220 (393)
.+..+........|+++++ ++++...++.|..|+. +++..........+..+ .++++++++.. ++.|..|+.. +
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 3444555677899999998 5667777899999998 45433222223333333 35778777664 4689999986 5
Q ss_pred ceeeecCC-----CCcEEEEEEeCC--EEEE----EeC-------------CCcEEEEEeccCCccccCceeecCceeeE
Q 016224 221 TDLSLSGP-----VGQVYAMAVGND--LLFA----GTQ-------------DGAILAWKFNVTTNCFEPAASLKGHSLAV 276 (393)
Q Consensus 221 ~~~~~~~~-----~~~v~~l~~~~~--~l~~----~~~-------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~v 276 (393)
+...+... ...+..+.++++ ++++ |.. .+.|..+|..++.. . . +. .....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~--~-~~-~~~~p 190 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--Q--R-MA-DLDHP 190 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--E--E-EE-EESSE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--E--E-Ee-cCCCC
Confidence 44332221 134567888887 4444 332 24566666544421 1 1 11 22334
Q ss_pred EEEEEc--CCEEEEecCC------CcEEEeeCCCccee--eEe-ccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCC
Q 016224 277 VSLVVG--ANKLYSGSMD------NSIRVWNLETLQCI--QTL-TEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDS 343 (393)
Q Consensus 277 ~~l~~~--~~~l~sg~~d------g~i~iwd~~~~~~~--~~~-~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~ 343 (393)
..++++ ++.|+.+... +.|.+||+...... ..+ .........+.++ ++ |.++..+ .|.+|+. ++
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~-~g 267 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDS-DG 267 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECT-TS
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECC-CC
Confidence 556665 5567666554 78999998754311 111 1112233456666 55 5555544 4999998 45
Q ss_pred cceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 344 GNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 344 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
+.+..+.... .+..++|.++. ..|+.++.++ |..+++
T Consensus 268 ~~~~~~~~~~---~~~~~~f~~d~---~~L~it~~~~-l~~~~~ 304 (305)
T 3dr2_A 268 QLLGHIPTPG---TASNCTFDQAQ---QRLFITGGPC-LWMLPL 304 (305)
T ss_dssp CEEEEEECSS---CCCEEEECTTS---CEEEEEETTE-EEEEEC
T ss_pred CEEEEEECCC---ceeEEEEeCCC---CEEEEEcCCe-EEEEEC
Confidence 5554444322 36778887443 2666666654 444443
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.65 E-value=7.2e-07 Score=81.71 Aligned_cols=230 Identities=6% Similarity=-0.051 Sum_probs=140.8
Q ss_pred EeeEecCc--EEEec----------CCCeEEEEECCCCcEEEEEecCC-------cCCEEEEEecCCCCEEEEEeC--CC
Q 016224 114 CRNWVQGN--CMYGE----------KCKFLHSWTVGDGFKLLTQLEGH-------QKVVSGITLPSGSDKLYSGSK--DE 172 (393)
Q Consensus 114 c~~~~~~~--~~~g~----------~dg~i~vwd~~~~~~~~~~l~~h-------~~~I~~i~~s~~~~~l~s~s~--dg 172 (393)
.+.+++++ ++++. .++.|.+||..+. +.+.++..+ ......++|+||+++|+++.. +.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~ 147 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCC
Confidence 57777763 34443 4789999999998 788887533 123457899999999999875 45
Q ss_pred cEEE--EECCCCeEEEEEecCCceEEEEeCCC--EEEEEcCCeEEEEECCC-----Cceee-----ecCCCCcEEEEEEe
Q 016224 173 TVRV--WDCASGQCAGVINLGGEVGCMISEGP--WIFIGVTNFVKAWNTQT-----NTDLS-----LSGPVGQVYAMAVG 238 (393)
Q Consensus 173 ~v~i--wd~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~i~v~d~~~-----~~~~~-----~~~~~~~v~~l~~~ 238 (393)
.|.+ +|..+ +..+..+.... +.+++. +++.+.++.+.+.++.+ ++... +.-...+. ...
T Consensus 148 ~v~V~~iD~~t---v~~i~v~~~~~-~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~ 220 (368)
T 1mda_H 148 AAGLSVPGASD---DQLTKSASCFH-IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QAN 220 (368)
T ss_dssp EEEEEETTTEE---EEEEECSSCCC-CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EET
T ss_pred eEEEEEEchhh---ceEEECCCceE-EccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccc
Confidence 7888 99877 55555443221 233332 33334677777788876 33221 11112222 222
Q ss_pred -CCEEEEEeCCCcEEEEEeccCCccccCceee----------cCceeeEEEEEEcCCEEEEecC---------CCcEEEe
Q 016224 239 -NDLLFAGTQDGAILAWKFNVTTNCFEPAASL----------KGHSLAVVSLVVGANKLYSGSM---------DNSIRVW 298 (393)
Q Consensus 239 -~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~----------~~~~~~v~~l~~~~~~l~sg~~---------dg~i~iw 298 (393)
...++..+. +.|.+.|+............+ .........+..++++++.+.. ++.+.++
T Consensus 221 ~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~Vi 299 (368)
T 1mda_H 221 YPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299 (368)
T ss_dssp TTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEE
T ss_pred cCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEE
Confidence 225555555 899999986532110000000 0011112356667777665432 2356699
Q ss_pred eCCCcceeeEeccCccceEEEEEc--CC-EEEEEe-CCCcEEEEEcCCCcceEEEEeec
Q 016224 299 NLETLQCIQTLTEHTSVVMSLLCW--DQ-FLLSCS-LDKTIKVWFATDSGNLEVTYTHN 353 (393)
Q Consensus 299 d~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~ 353 (393)
|+.+++.+.++.... ....+.++ ++ .+++.. .++.|.++|+.+.+.+..+....
T Consensus 300 D~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 300 TASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp ESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred ECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 999999999887544 46677776 55 566666 59999999999887776665443
No 244
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.64 E-value=2e-05 Score=77.00 Aligned_cols=226 Identities=11% Similarity=0.012 Sum_probs=136.0
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCc----CCEEE-EEecCCCCEEEEEe------CCCcEEEEECCCCeEEEEEec
Q 016224 122 CMYGEKCKFLHSWTVGDGFKLLTQLEGHQ----KVVSG-ITLPSGSDKLYSGS------KDETVRVWDCASGQCAGVINL 190 (393)
Q Consensus 122 ~~~g~~dg~i~vwd~~~~~~~~~~l~~h~----~~I~~-i~~s~~~~~l~s~s------~dg~v~iwd~~~~~~~~~~~~ 190 (393)
+++++.|+.|..+|..++ +.+-...... ..+++ -.+. ++ .|+.++ .+|.|..+|.++|+.+..+..
T Consensus 124 V~v~t~dg~l~AlDa~TG-~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETG-ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTC-CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCC-CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 788999999999999999 5555443221 01111 0111 33 555554 389999999999999988875
Q ss_pred CCce-----------------------------------------EEEEeCCCEEEEEc-C----------------CeE
Q 016224 191 GGEV-----------------------------------------GCMISEGPWIFIGV-T----------------NFV 212 (393)
Q Consensus 191 ~~~~-----------------------------------------~~~~~~~~~l~~~~-~----------------~~i 212 (393)
.... ..+.....+++.+. + +.|
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence 4321 12234556666653 2 379
Q ss_pred EEEECCCCcee-eec--CCC--------CcEEEEEE---eC---CEEEEEeCCCcEEEEEeccCCccccCcee-------
Q 016224 213 KAWNTQTNTDL-SLS--GPV--------GQVYAMAV---GN---DLLFAGTQDGAILAWKFNVTTNCFEPAAS------- 268 (393)
Q Consensus 213 ~v~d~~~~~~~-~~~--~~~--------~~v~~l~~---~~---~~l~~~~~dg~I~vwd~~~~~~~~~~~~~------- 268 (393)
..+|..+++.+ .++ .|. .++. +.. .. ..++.++.+|.++++|..+++..+.....
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 99999999887 322 221 1222 222 23 25777889999999998877532211000
Q ss_pred -ec-CceeeE--------------------------EEEEEc--CCEEEE------------------------------
Q 016224 269 -LK-GHSLAV--------------------------VSLVVG--ANKLYS------------------------------ 288 (393)
Q Consensus 269 -~~-~~~~~v--------------------------~~l~~~--~~~l~s------------------------------ 288 (393)
.. ....++ ..++++ ..++++
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 00 000000 011111 111111
Q ss_pred ---ec------CCCcEEEeeCCCcceeeEeccCccce-EEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEe
Q 016224 289 ---GS------MDNSIRVWNLETLQCIQTLTEHTSVV-MSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYT 351 (393)
Q Consensus 289 ---g~------~dg~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 351 (393)
.+ .+|.|..||+.+++.+.+........ -.+...+..++.++.|+.|+.||.++++.+..+..
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC
Confidence 01 45889999999999887775322111 12445688888899999999999999998777654
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.63 E-value=9.7e-06 Score=69.68 Aligned_cols=189 Identities=7% Similarity=0.018 Sum_probs=124.7
Q ss_pred eEEEEEecCCce--EEEEeCCCEEEEE--cCCeEEEEECCCCceeeec-CCCCcEEEEEEeCC-EEEEEeCCCcEEEEEe
Q 016224 183 QCAGVINLGGEV--GCMISEGPWIFIG--VTNFVKAWNTQTNTDLSLS-GPVGQVYAMAVGND-LLFAGTQDGAILAWKF 256 (393)
Q Consensus 183 ~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~i~v~d~~~~~~~~~~-~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~ 256 (393)
+.+.++.+.... ..+..++..|..+ .++.|+++|+++++.+... .....-..+++.++ ++++.-.++.+.+||.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEET
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEEC
Confidence 455666655433 3444344555543 6678999999999987332 22222345777777 5555557899999999
Q ss_pred ccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCc--c---ceEEEEEcCCEEEEEe-
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHT--S---VVMSLLCWDQFLLSCS- 330 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~---~v~~l~~~~~~l~s~s- 330 (393)
.+. +.+.++... ..-..++++++.|+.+..++.|.++|..+.+.+.++.... . .++.+.+.+..|.+..
T Consensus 124 ~Tl----~~~~ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw 198 (268)
T 3nok_A 124 MPP----QRERTTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIW 198 (268)
T ss_dssp TTT----EEEEEEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred CcC----cEEEEEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEEC
Confidence 876 444444422 2235677888888888789999999999999988876422 2 3456677644555444
Q ss_pred CCCcEEEEEcCCCcceEEEEeec-----------CCccEEEEEeeeCCCCCcEEEEEeC
Q 016224 331 LDKTIKVWFATDSGNLEVTYTHN-----------EEHGVLALCGMPDSEGKPVLLCSCN 378 (393)
Q Consensus 331 ~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~l~s~s~ 378 (393)
.+..|.+.|..+++.+..+.... ...-...+++.|+. +++++||-.
T Consensus 199 ~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~--~rlfVTGK~ 255 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS--GRIFMTGKL 255 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT--CCEEEEETT
T ss_pred CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC--CEEEEeCCC
Confidence 67899999999988777766431 12346778988764 457777743
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.63 E-value=0.00013 Score=74.05 Aligned_cols=269 Identities=10% Similarity=0.055 Sum_probs=162.4
Q ss_pred cceEEeeEe-cCcEEEecCCCeEEEEECCCCcEEEEEecC-------CcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 016224 110 TDILCRNWV-QGNCMYGEKCKFLHSWTVGDGFKLLTQLEG-------HQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (393)
Q Consensus 110 ~~i~c~~~~-~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~-------h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~ 181 (393)
..|.++... .+.+..|+.++-|.+||..++ +....... ....|.+|...+++.+.+ |+.+ -|.+||..+
T Consensus 215 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~ 291 (795)
T 4a2l_A 215 KQIQAILQQSPTRIWVATEGAGLFLINPKTK-EIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGT 291 (795)
T ss_dssp CCEEEEEEEETTEEEEEEBSSCEEEEETTTT-EEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTT
T ss_pred CeeEEEEEcCCCCEEEEECCCCeEEEeCCCC-eEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCC
Confidence 356666654 446677876656889998776 44332221 246799999988887544 5555 589999887
Q ss_pred CeEEEEEec--------CCceEEEEe--CCCEEEEEcCCeEEEEECCCCceeeecC-------CCCcEEEEEEeCC-EEE
Q 016224 182 GQCAGVINL--------GGEVGCMIS--EGPWIFIGVTNFVKAWNTQTNTDLSLSG-------PVGQVYAMAVGND-LLF 243 (393)
Q Consensus 182 ~~~~~~~~~--------~~~~~~~~~--~~~~l~~~~~~~i~v~d~~~~~~~~~~~-------~~~~v~~l~~~~~-~l~ 243 (393)
++....... ...+.++.. ++.+-+...++-|..|+..+.....+.. ....|.++..+++ .|.
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW 371 (795)
T 4a2l_A 292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW 371 (795)
T ss_dssp TEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE
T ss_pred CeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE
Confidence 765443221 123555543 5666665667789999877655432221 2456899998877 788
Q ss_pred EEeCCCcEEEEEeccCCccccCceee------cCceeeEEEEEEc-CCE-EEEecCCCcEEEeeCCCcceeeEec----c
Q 016224 244 AGTQDGAILAWKFNVTTNCFEPAASL------KGHSLAVVSLVVG-ANK-LYSGSMDNSIRVWNLETLQCIQTLT----E 311 (393)
Q Consensus 244 ~~~~dg~I~vwd~~~~~~~~~~~~~~------~~~~~~v~~l~~~-~~~-l~sg~~dg~i~iwd~~~~~~~~~~~----~ 311 (393)
+|+.++-|..|+..+... ...... .-....|.++..+ ... |..|+.++-|.+||..+++...... .
T Consensus 372 iGt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l 449 (795)
T 4a2l_A 372 IGTNDGGLNLYNPITQRF--TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQL 449 (795)
T ss_dssp EEESSSCEEEECTTTCCE--EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCC
T ss_pred EEECCCCeEEEcCCCCcE--EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCc
Confidence 889888899998765421 111000 0123568888875 334 8888887889999998776433221 1
Q ss_pred CccceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEee-----cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEE
Q 016224 312 HTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYTH-----NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFY 385 (393)
Q Consensus 312 ~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iw 385 (393)
....|.++..+ ...|..|+. +.|.+||..+.. ...+... .....+.++...++ + . |..|+. +-|..|
T Consensus 450 ~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~--g-~-lWigt~-~Gl~~~ 522 (795)
T 4a2l_A 450 VNENVYAILPDGEGNLWLGTL-SALVRFNPEQRS-FTTIEKEKDGTPVVSKQITTLFRDSH--K-R-LWIGGE-EGLSVF 522 (795)
T ss_dssp SCSCEEEEEECSSSCEEEEES-SCEEEEETTTTE-EEECCBCTTCCBCCCCCEEEEEECTT--C-C-EEEEES-SCEEEE
T ss_pred CCCeeEEEEECCCCCEEEEec-CceeEEeCCCCe-EEEccccccccccCCceEEEEEECCC--C-C-EEEEeC-CceEEE
Confidence 34568888877 344555555 568889986543 2222211 11234666654332 2 2 444445 457778
Q ss_pred eCCce
Q 016224 386 DLPSV 390 (393)
Q Consensus 386 d~~s~ 390 (393)
+..+.
T Consensus 523 ~~~~~ 527 (795)
T 4a2l_A 523 KQEGL 527 (795)
T ss_dssp EEETT
T ss_pred eCCCC
Confidence 76543
No 247
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.62 E-value=8.7e-06 Score=74.01 Aligned_cols=227 Identities=12% Similarity=0.019 Sum_probs=130.2
Q ss_pred cceEEeeEecC-cEEEec---CCCeEEEEECCCCcEEEEEe-------cCCcCCEEEEEecCCCCEEEEEeC-----CCc
Q 016224 110 TDILCRNWVQG-NCMYGE---KCKFLHSWTVGDGFKLLTQL-------EGHQKVVSGITLPSGSDKLYSGSK-----DET 173 (393)
Q Consensus 110 ~~i~c~~~~~~-~~~~g~---~dg~i~vwd~~~~~~~~~~l-------~~h~~~I~~i~~s~~~~~l~s~s~-----dg~ 173 (393)
.....++++++ .++++. .++.++||.+.++ ++. .+ ..|-..+..|+++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g-~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD-GLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT-EEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC-Cee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 35566777755 444432 2343556655455 432 22 235578999999999875555433 578
Q ss_pred EEEEECCCCeEEEEEecCCc-------e--EEEEeCCCEEEEE-----cCCeEEEEECCCCceeeec-CC----------
Q 016224 174 VRVWDCASGQCAGVINLGGE-------V--GCMISEGPWIFIG-----VTNFVKAWNTQTNTDLSLS-GP---------- 228 (393)
Q Consensus 174 v~iwd~~~~~~~~~~~~~~~-------~--~~~~~~~~~l~~~-----~~~~i~v~d~~~~~~~~~~-~~---------- 228 (393)
|.+||+.+++.+..+..+.. . ..+.+++..+.++ .++.|.+||+.+++..... .|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 99999999998887765321 1 2233344455443 3569999999887655322 21
Q ss_pred -------------------CCcEEEEEEeCC--EEEEEeCCC-cEEEEEeccCCc---c-ccCce--eecCceeeEEEEE
Q 016224 229 -------------------VGQVYAMAVGND--LLFAGTQDG-AILAWKFNVTTN---C-FEPAA--SLKGHSLAVVSLV 280 (393)
Q Consensus 229 -------------------~~~v~~l~~~~~--~l~~~~~dg-~I~vwd~~~~~~---~-~~~~~--~~~~~~~~v~~l~ 280 (393)
...+..|+++++ .|+++..++ .|..++...... . .+... ...++......++
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia 254 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS 254 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE
Confidence 023578999988 666666555 555554321110 0 00000 1111222233345
Q ss_pred E--cCCEEEEecCCCcEEEeeCCCcceeeEecc-CccceEEEEEc--CCEEEEEeCCCcEEEE
Q 016224 281 V--GANKLYSGSMDNSIRVWNLETLQCIQTLTE-HTSVVMSLLCW--DQFLLSCSLDKTIKVW 338 (393)
Q Consensus 281 ~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~l~~~--~~~l~s~s~dg~i~iw 338 (393)
+ +++++++...++.|.+||..+++....... +.....++++. +.++++.+..+.+.+|
T Consensus 255 ~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 255 IDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp ECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred ECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 5 467888888899999999856654333322 23456788886 4555665554444443
No 248
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.59 E-value=2.6e-06 Score=77.57 Aligned_cols=232 Identities=13% Similarity=0.058 Sum_probs=129.6
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEe--CCCcEEEEECCCCeEEEEEec--------CCceEEEE--eCCCEEEEEc
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGS--KDETVRVWDCASGQCAGVINL--------GGEVGCMI--SEGPWIFIGV 208 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s--~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~--~~~~~l~~~~ 208 (393)
+.+..+. .....|+++++++++++.. .++.++||.+.+++.. .+.. -..+..+. ++++++++..
T Consensus 10 ~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 10 EVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp EEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred EEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 4555544 6889999999999988864 2343566665555532 2211 11233332 4566666553
Q ss_pred ------CCeEEEEECCCCcee-eecC------CCCcEEEEEEeCC--E-EEEEe---CCCcEEEEEeccCCccccC----
Q 016224 209 ------TNFVKAWNTQTNTDL-SLSG------PVGQVYAMAVGND--L-LFAGT---QDGAILAWKFNVTTNCFEP---- 265 (393)
Q Consensus 209 ------~~~i~v~d~~~~~~~-~~~~------~~~~v~~l~~~~~--~-l~~~~---~dg~I~vwd~~~~~~~~~~---- 265 (393)
+..|.+||+.+++.+ .+.. +...+..++++++ . +++-. .++.|.+||+.++......
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 479999999988854 2221 2235688999864 4 44444 5789999998754311000
Q ss_pred -------ceeecCc--------------eeeEEEEEEc--CCEEEEecCCC-cEEEeeCC---Cc-----ceee--Eecc
Q 016224 266 -------AASLKGH--------------SLAVVSLVVG--ANKLYSGSMDN-SIRVWNLE---TL-----QCIQ--TLTE 311 (393)
Q Consensus 266 -------~~~~~~~--------------~~~v~~l~~~--~~~l~sg~~dg-~i~iwd~~---~~-----~~~~--~~~~ 311 (393)
.....+. ...+..++++ ++.|+.+..++ .|..++.. .+ +... ...+
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 245 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS 245 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence 0000000 0124566665 55677766655 55544432 11 1111 1112
Q ss_pred CccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCC
Q 016224 312 HTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDN 380 (393)
Q Consensus 312 ~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg 380 (393)
+......++++ +.++++...++.|.+||..+++ +..+...........+++.+++ .++++.+..+
T Consensus 246 ~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~~g---~l~v~~~~~~ 312 (343)
T 2qe8_A 246 EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGSDG---YLYFDCNQLH 312 (343)
T ss_dssp ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECTTS---CEEEEECCGG
T ss_pred cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECCCC---cEEEEeCccc
Confidence 23344456666 6788888888999999984443 3333333223457788887653 3666665443
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.54 E-value=0.00025 Score=61.70 Aligned_cols=232 Identities=9% Similarity=0.027 Sum_probs=133.0
Q ss_pred CeEEEEECCCCcEE----EEEecCCcCCEEEEEecCCCCEEEEEe-CCCcEEEEECCCCeEEEEEecC-CceEEE--EeC
Q 016224 129 KFLHSWTVGDGFKL----LTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVRVWDCASGQCAGVINLG-GEVGCM--ISE 200 (393)
Q Consensus 129 g~i~vwd~~~~~~~----~~~l~~h~~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~~-~~~~~~--~~~ 200 (393)
+.|+.++++..... ...+......+..++|++++..|+.+. ..+.|.+++.........+... .....+ .++
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~ 89 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL 89 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec
Confidence 46788887654210 111222234678999999766666554 5689999999766544433322 233333 334
Q ss_pred CCEEEEE--cCCeEEEEECCCCceeeec-CCCCcEEEEEEeCC--EEEEEeC---CCcEEEEEeccCCccccCceeecCc
Q 016224 201 GPWIFIG--VTNFVKAWNTQTNTDLSLS-GPVGQVYAMAVGND--LLFAGTQ---DGAILAWKFNVTTNCFEPAASLKGH 272 (393)
Q Consensus 201 ~~~l~~~--~~~~i~v~d~~~~~~~~~~-~~~~~v~~l~~~~~--~l~~~~~---dg~I~vwd~~~~~~~~~~~~~~~~~ 272 (393)
+..++++ ..+.|.+++........+. ........++++++ .|+.+.. .+.|..+++..... +.+ ....
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~--~~~--~~~~ 165 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--RIL--AQDN 165 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC--EEE--ECTT
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc--EEE--EECC
Confidence 5555554 4568999998765433222 22356789999984 5555443 36888888764321 111 1111
Q ss_pred eeeEEEEEEc--CCEE-EEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEEe-CCCcEEEEEcCCCcceEE
Q 016224 273 SLAVVSLVVG--ANKL-YSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCS-LDKTIKVWFATDSGNLEV 348 (393)
Q Consensus 273 ~~~v~~l~~~--~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~ 348 (393)
......++++ ++.| ++-...+.|.++|+........+.. ......++.++..|+.+. ..+.|.++|..+++.+..
T Consensus 166 ~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 166 LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 2234556665 4554 5555678999999986544333332 223356667766666555 468999999987776655
Q ss_pred EEeecCCccEEEEEeeeC
Q 016224 349 TYTHNEEHGVLALCGMPD 366 (393)
Q Consensus 349 ~~~~~~~~~v~~~~~~~~ 366 (393)
+..... .....+++.|+
T Consensus 245 i~~g~~-~~p~gi~~~~~ 261 (267)
T 1npe_A 245 FHPHKQ-TRLYGITIALS 261 (267)
T ss_dssp ECCSSC-CCCCCEEEECS
T ss_pred Eccccc-cccceeeecCc
Confidence 543221 12344555554
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.53 E-value=5.9e-05 Score=64.79 Aligned_cols=188 Identities=10% Similarity=0.035 Sum_probs=120.8
Q ss_pred eEEEEEecCCce--EEEE-eCCCEEEE-EcCC--eEEEEECCCCceeeecCCCCc--EEEEEEeCCEEEE-EeCCCcEEE
Q 016224 183 QCAGVINLGGEV--GCMI-SEGPWIFI-GVTN--FVKAWNTQTNTDLSLSGPVGQ--VYAMAVGNDLLFA-GTQDGAILA 253 (393)
Q Consensus 183 ~~~~~~~~~~~~--~~~~-~~~~~l~~-~~~~--~i~v~d~~~~~~~~~~~~~~~--v~~l~~~~~~l~~-~~~dg~I~v 253 (393)
+.++++.+.... ..+. .++.+..+ |.++ .|+++|+++++.+........ -..+++..+.|+. .-.++.+.+
T Consensus 32 ~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 456667665443 3333 34433333 3454 899999999998733222223 3457777774444 446889999
Q ss_pred EEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCc-----cceEEEEEcCCEEEE
Q 016224 254 WKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHT-----SVVMSLLCWDQFLLS 328 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~l~~~~~~l~s 328 (393)
||..+. +.+.++.... .-..++++++.|+.+..++.|.++|..+.+.+.++.... ..++.+.+.+..|.+
T Consensus 112 ~D~~t~----~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lya 186 (262)
T 3nol_A 112 WNIRNL----RQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFA 186 (262)
T ss_dssp EETTTC----CEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred EECccC----cEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEE
Confidence 999876 4444444221 224667888877777778899999999999988876422 223456666445554
Q ss_pred Ee-CCCcEEEEEcCCCcceEEEEeec----------CCccEEEEEeeeCCCCCcEEEEEe
Q 016224 329 CS-LDKTIKVWFATDSGNLEVTYTHN----------EEHGVLALCGMPDSEGKPVLLCSC 377 (393)
Q Consensus 329 ~s-~dg~i~iwd~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~l~s~s 377 (393)
.. .+..|.+.|..+++.+..+.... .......+++.|+.. +++++|-
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~--~lfVTGK 244 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH--RLFVTGK 244 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT--EEEEEET
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC--EEEEECC
Confidence 44 68899999999988777765421 122457799988644 4566663
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.53 E-value=9.5e-05 Score=62.92 Aligned_cols=189 Identities=11% Similarity=0.034 Sum_probs=122.9
Q ss_pred eEEEEEecCCc--eEEEEeCCCEEEEE--cC--CeEEEEECCCCceeeecCCCC--cEEEEEEeCC-EEEEEeCCCcEEE
Q 016224 183 QCAGVINLGGE--VGCMISEGPWIFIG--VT--NFVKAWNTQTNTDLSLSGPVG--QVYAMAVGND-LLFAGTQDGAILA 253 (393)
Q Consensus 183 ~~~~~~~~~~~--~~~~~~~~~~l~~~--~~--~~i~v~d~~~~~~~~~~~~~~--~v~~l~~~~~-~l~~~~~dg~I~v 253 (393)
+.+.++.+... ...+..++..|..+ .. ..|+.+|+.+++......... .-..+++..+ ++...-.++.+.+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEE
Confidence 45666665543 23333333455543 33 489999999999883332222 2345677777 4444557899999
Q ss_pred EEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCc-----cceEEEEEcCCEEEE
Q 016224 254 WKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHT-----SVVMSLLCWDQFLLS 328 (393)
Q Consensus 254 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~l~~~~~~l~s 328 (393)
||..+. +.+.++.... .-..++.++..|+.+..++.|.++|..+.+.+.++.... ..++.+.+.+..|.+
T Consensus 90 ~D~~tl----~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 90 YDLATL----TPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA 164 (243)
T ss_dssp EETTTT----EEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred EECCcC----cEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE
Confidence 999876 4444444222 225677888877777778999999999999988886432 244667776554554
Q ss_pred Ee-CCCcEEEEEcCCCcceEEEEeec-----------CCccEEEEEeeeCCCCCcEEEEEeC
Q 016224 329 CS-LDKTIKVWFATDSGNLEVTYTHN-----------EEHGVLALCGMPDSEGKPVLLCSCN 378 (393)
Q Consensus 329 ~s-~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~l~s~s~ 378 (393)
.. .+..|.+.|..+++.+..+.... ...-...+++.|.. +++++||-.
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~--~~lfVTGK~ 224 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH--DRLFVTGKR 224 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT--TEEEEEETT
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC--CEEEEECCC
Confidence 44 67899999999988877766331 22345779998764 346677643
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.51 E-value=8.9e-05 Score=72.32 Aligned_cols=256 Identities=11% Similarity=0.012 Sum_probs=148.2
Q ss_pred EecCcEEEecCCCeEEEEECCCCcEEEEEecCCcC----CEEE--EEec--CCCC-EEEEEe------CCCcEEEEECCC
Q 016224 117 WVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQK----VVSG--ITLP--SGSD-KLYSGS------KDETVRVWDCAS 181 (393)
Q Consensus 117 ~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~----~I~~--i~~s--~~~~-~l~s~s------~dg~v~iwd~~~ 181 (393)
...+.+++++.++.|..+|..++ +.+-..+.... .+.+ +... .+++ .|+.++ .++.|..+|..+
T Consensus 115 ~~~~~v~~~t~dg~l~AlD~~TG-~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 115 IYGDKVFFGTLDASVVALNKNTG-KVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp EETTEEEEEETTTEEEEEESSSC-CEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred EECCEEEEEeCCCEEEEEECCCC-CEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 45677888999999999999999 55555443210 1110 1111 1233 566654 378999999999
Q ss_pred CeEEEEEecCCce--------------------------------------------EEEEeCCCEEEEEc---------
Q 016224 182 GQCAGVINLGGEV--------------------------------------------GCMISEGPWIFIGV--------- 208 (393)
Q Consensus 182 ~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~l~~~~--------- 208 (393)
|+.+......... ..+.+...+++++.
T Consensus 194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 9988876542110 11222445666543
Q ss_pred ------------C----CeEEEEECCCCcee-eec--CCC--------CcEEEEEE---eC---CEEEEEeCCCcEEEEE
Q 016224 209 ------------T----NFVKAWNTQTNTDL-SLS--GPV--------GQVYAMAV---GN---DLLFAGTQDGAILAWK 255 (393)
Q Consensus 209 ------------~----~~i~v~d~~~~~~~-~~~--~~~--------~~v~~l~~---~~---~~l~~~~~dg~I~vwd 255 (393)
+ +.|..+|..+++.+ .++ .|. .++. +.. .. ..++.++.+|.++++|
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 47999999999987 332 221 1222 222 22 2678899999999999
Q ss_pred eccCCccccCcee--------e-------------c---------CceeeE-----------EEEEEcC--CEEEEe---
Q 016224 256 FNVTTNCFEPAAS--------L-------------K---------GHSLAV-----------VSLVVGA--NKLYSG--- 289 (393)
Q Consensus 256 ~~~~~~~~~~~~~--------~-------------~---------~~~~~v-----------~~l~~~~--~~l~sg--- 289 (393)
..+++..+..... + . .....+ ..+++++ .++++.
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 8776432110000 0 0 000000 0112221 222221
Q ss_pred ------------------------------cCCCcEEEeeCCCcceeeEeccCccce-EEEEEcCCEEEEEeCCCcEEEE
Q 016224 290 ------------------------------SMDNSIRVWNLETLQCIQTLTEHTSVV-MSLLCWDQFLLSCSLDKTIKVW 338 (393)
Q Consensus 290 ------------------------------~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~~l~s~s~dg~i~iw 338 (393)
..+|.|..||+.+++.+.+........ ..+...+.+++.++.|+.++.|
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~ 512 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAF 512 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEE
Confidence 136889999999999887776432221 2244457888899999999999
Q ss_pred EcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe
Q 016224 339 FATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC 377 (393)
Q Consensus 339 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s 377 (393)
|.++++.+..+..... .....+.+..+ +++|+++.+
T Consensus 513 D~~tG~~lW~~~~~~g-~~a~P~~y~~~--G~qYv~~~~ 548 (582)
T 1flg_A 513 DAKSGKELWKFQTGSG-IVSPPITWEQD--GEQYLGVTV 548 (582)
T ss_dssp ETTTCCEEEEEECSSC-CCSCCEEEEET--TEEEEEEEE
T ss_pred ECCCCCEEEEecCCCC-cccCceEEEEC--CEEEEEEEc
Confidence 9999988877665322 11222444433 444666543
No 253
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=0.00095 Score=67.58 Aligned_cols=271 Identities=11% Similarity=0.020 Sum_probs=161.1
Q ss_pred cceEEeeEecC-cEEEecCCCeEEEEECCCCcEEEEEec-------CCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 016224 110 TDILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQLE-------GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (393)
Q Consensus 110 ~~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~~~l~-------~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~ 181 (393)
..|.++....+ .+..|+.. -|.+||..++ +...... .....|.+|...+++. |..|+..+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTE-TFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEEEETT-EEEEEETTTT-EEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEEEeCC-cHheECCCCC-cEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC
Confidence 35777766544 57777766 6889998766 3322111 1246799999887775 55666656788999887
Q ss_pred CeEEEEEe-------c--------CCceEEEEe--CCCEEEEEcCCeEEEEECCCCceeeecC----------CCCcEEE
Q 016224 182 GQCAGVIN-------L--------GGEVGCMIS--EGPWIFIGVTNFVKAWNTQTNTDLSLSG----------PVGQVYA 234 (393)
Q Consensus 182 ~~~~~~~~-------~--------~~~~~~~~~--~~~~l~~~~~~~i~v~d~~~~~~~~~~~----------~~~~v~~ 234 (393)
++...... . ...+.++.. ++.+-+...++-|..++........+.. ....|.+
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 367 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSS 367 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEE
Confidence 65433221 1 123455543 4555555567889999987765443211 2356899
Q ss_pred EEEeCC-EEEEEeCCCcEEEEEeccCCccccCce-eecCceeeEEEEEEc-CCEEEEecCCCcEEEeeCCCcceeeEec-
Q 016224 235 MAVGND-LLFAGTQDGAILAWKFNVTTNCFEPAA-SLKGHSLAVVSLVVG-ANKLYSGSMDNSIRVWNLETLQCIQTLT- 310 (393)
Q Consensus 235 l~~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~- 310 (393)
+...++ .|.+|+.++-|..||..+... .... ........|.++..+ ...|..|+.++-|..+|..+++......
T Consensus 368 i~~d~~g~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~ 445 (781)
T 3v9f_A 368 VCDDGQGKLWIGTDGGGINVFENGKRVA--IYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELE 445 (781)
T ss_dssp EEECTTSCEEEEEBSSCEEEEETTEEEE--ECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCST
T ss_pred EEEcCCCCEEEEeCCCcEEEEECCCCeE--EEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccC
Confidence 998876 788888778899998765421 1111 011234568888886 4567778877789999988765432211
Q ss_pred -cCccceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEeec----CCccEEEEEeeeCCCCCcEEEEEeCCCeEEE
Q 016224 311 -EHTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYTHN----EEHGVLALCGMPDSEGKPVLLCSCNDNSVRF 384 (393)
Q Consensus 311 -~~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~i 384 (393)
.....|.++..+ ...|..|+. +.|..||..+.... .+.... ....+.++...++ + .|..|+.++-|..
T Consensus 446 ~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~--g--~lWigt~~~Gl~~ 519 (781)
T 3v9f_A 446 KNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVI-HHYDTSNSQLLENFVRSIAQDSE--G--RFWIGTFGGGVGI 519 (781)
T ss_dssp TTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCC-EEECTTTSSCSCSCEEEEEECTT--C--CEEEEESSSCEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEE-ecccCcccccccceeEEEEEcCC--C--CEEEEEcCCCEEE
Confidence 234578888887 456666766 56889998654432 222111 0234666654332 2 2555555444777
Q ss_pred EeCCcee
Q 016224 385 YDLPSVI 391 (393)
Q Consensus 385 wd~~s~~ 391 (393)
|+..+.+
T Consensus 520 ~~~~~~~ 526 (781)
T 3v9f_A 520 YTPDMQL 526 (781)
T ss_dssp ECTTCCE
T ss_pred EeCCCCe
Confidence 8876543
No 254
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=0.00043 Score=70.14 Aligned_cols=270 Identities=14% Similarity=0.048 Sum_probs=160.6
Q ss_pred cceEEeeEe-cCcEEEecCCCeEEEEECCCCcEEEEEec-------CCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 016224 110 TDILCRNWV-QGNCMYGEKCKFLHSWTVGDGFKLLTQLE-------GHQKVVSGITLPSGSDKLYSGSKDETVRVWDCAS 181 (393)
Q Consensus 110 ~~i~c~~~~-~~~~~~g~~dg~i~vwd~~~~~~~~~~l~-------~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~ 181 (393)
..|.++... .+.+..|+.++-|..||..++ +...... .....|.+|...+++.+.+ |..+ -|.+||..+
T Consensus 163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~ 239 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDK-SVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANT 239 (781)
T ss_dssp CCEEEEEEEETTEEEEEETTTEEEEEETTTT-EEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTT
T ss_pred cceEEEEECCCCCEEEEecCCCeEEEcCCCC-ceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCC
Confidence 356777665 556778887767889998776 3322111 1235799999888876555 4455 689999887
Q ss_pred CeEEEEEec--------CCceEEEEe-CCCEEEEEcC-CeEEEEECCCCceeeec---------------CCCCcEEEEE
Q 016224 182 GQCAGVINL--------GGEVGCMIS-EGPWIFIGVT-NFVKAWNTQTNTDLSLS---------------GPVGQVYAMA 236 (393)
Q Consensus 182 ~~~~~~~~~--------~~~~~~~~~-~~~~l~~~~~-~~i~v~d~~~~~~~~~~---------------~~~~~v~~l~ 236 (393)
++....... ...+.++.. ....+.++.. +-|.+++..+....... -....|.++.
T Consensus 240 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~ 319 (781)
T 3v9f_A 240 ETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIF 319 (781)
T ss_dssp TEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEE
T ss_pred CcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEE
Confidence 765432211 233455543 3334555544 78889998876543221 1245788998
Q ss_pred EeCC-EEEEEeCCCcEEEEEeccCCccccCce-------eecCceeeEEEEEEcC-CEEEEecCCCcEEEeeCCCcceee
Q 016224 237 VGND-LLFAGTQDGAILAWKFNVTTNCFEPAA-------SLKGHSLAVVSLVVGA-NKLYSGSMDNSIRVWNLETLQCIQ 307 (393)
Q Consensus 237 ~~~~-~l~~~~~dg~I~vwd~~~~~~~~~~~~-------~~~~~~~~v~~l~~~~-~~l~sg~~dg~i~iwd~~~~~~~~ 307 (393)
.+.+ .|.+|+.++-|..++...... .... ...-....|.++..+. ..|..|+.++-|..||..+++...
T Consensus 320 ~D~~g~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~ 397 (781)
T 3v9f_A 320 QDSFNNIWIGTWGGGINFISNAPPTF--HTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIY 397 (781)
T ss_dssp ECSSCCEEEEEBSSCEEEECSSCCSC--EEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEEC
T ss_pred EeCCCCEEEEecCCeEEEeCCCCCcc--eeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEE
Confidence 8877 788888888899988765421 1110 0011234688888874 467788877779999987654322
Q ss_pred Ee---ccCccceEEEEEc-CCEEEEEeCCCcEEEEEcCCCcceEEEEe-ecCCccEEEEEeeeCCCCCcEEEEEeCCCeE
Q 016224 308 TL---TEHTSVVMSLLCW-DQFLLSCSLDKTIKVWFATDSGNLEVTYT-HNEEHGVLALCGMPDSEGKPVLLCSCNDNSV 382 (393)
Q Consensus 308 ~~---~~~~~~v~~l~~~-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I 382 (393)
.. ......|.++..+ ...|..|+.++.|..+|..+++ +..+.. ......+.++...+ ++ .|..|+. +-|
T Consensus 398 ~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~---~g-~lwigt~-~Gl 471 (781)
T 3v9f_A 398 NKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK-FQIIELEKNELLDVRVFYEDK---NK-KIWIGTH-AGV 471 (781)
T ss_dssp C-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE-EEECCSTTTCCCCEEEEEECT---TS-EEEEEET-TEE
T ss_pred ccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc-EEEeccCCCCCCeEEEEEECC---CC-CEEEEEC-Cce
Confidence 11 1234568888887 4567778877789999876543 222211 11223466654432 22 3555655 558
Q ss_pred EEEeCCce
Q 016224 383 RFYDLPSV 390 (393)
Q Consensus 383 ~iwd~~s~ 390 (393)
.+||..++
T Consensus 472 ~~~~~~~~ 479 (781)
T 3v9f_A 472 FVIDLASK 479 (781)
T ss_dssp EEEESSSS
T ss_pred EEEeCCCC
Confidence 88887664
No 255
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.39 E-value=0.00022 Score=66.08 Aligned_cols=204 Identities=9% Similarity=0.043 Sum_probs=125.8
Q ss_pred EecCCCeEEEEECCCC---cEEEEEec------C-CcCCEEEEEecCCCCEEEEEeCC------CcEEEEECCCCeEEEE
Q 016224 124 YGEKCKFLHSWTVGDG---FKLLTQLE------G-HQKVVSGITLPSGSDKLYSGSKD------ETVRVWDCASGQCAGV 187 (393)
Q Consensus 124 ~g~~dg~i~vwd~~~~---~~~~~~l~------~-h~~~I~~i~~s~~~~~l~s~s~d------g~v~iwd~~~~~~~~~ 187 (393)
.+..++.|+|+|+.+. .+++++++ . -...-..+...|++ +++++..+ |.|.+.|.++.+.+.+
T Consensus 101 ~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~ 179 (462)
T 2ece_A 101 PGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGK 179 (462)
T ss_dssp EBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEE
T ss_pred ccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEE
Confidence 4778899999998632 35666663 0 11245667888999 77776655 7899999999999998
Q ss_pred EecCCce------EEEEeCCCEEEEEc--------------------CCeEEEEECCCCcee-eecC--CCCcEEEEEE-
Q 016224 188 INLGGEV------GCMISEGPWIFIGV--------------------TNFVKAWNTQTNTDL-SLSG--PVGQVYAMAV- 237 (393)
Q Consensus 188 ~~~~~~~------~~~~~~~~~l~~~~--------------------~~~i~v~d~~~~~~~-~~~~--~~~~v~~l~~- 237 (393)
+...... ..+.++++.++++. .+.|.+||+.+++.. .+.. .......+.|
T Consensus 180 ~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~ 259 (462)
T 2ece_A 180 WEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPL 259 (462)
T ss_dssp CCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEEC
T ss_pred EccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEee
Confidence 8744221 23456788888774 679999999988765 2222 2234556656
Q ss_pred -eCC--EEEEEe------CCCcEEEEEeccCCccccCceee--cCc----------------eeeEEE--EEEcCCEEEE
Q 016224 238 -GND--LLFAGT------QDGAILAWKFNVTTNCFEPAASL--KGH----------------SLAVVS--LVVGANKLYS 288 (393)
Q Consensus 238 -~~~--~l~~~~------~dg~I~vwd~~~~~~~~~~~~~~--~~~----------------~~~v~~--l~~~~~~l~s 288 (393)
+|+ ++++++ .+++|.+|....+. ++....+ ... ...... ++.++++|++
T Consensus 260 ~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~--~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYV 337 (462)
T 2ece_A 260 HDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK--WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYL 337 (462)
T ss_dssp SSTTCCEEEEEEEEETTTCCEEEEEEEEETTE--EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEE
T ss_pred ECCCCCEEEEEEeeeccCCCceEEEEEecCCc--eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEE
Confidence 877 444444 56788877665321 1111110 000 112233 4556777665
Q ss_pred ec-CCCcEEEeeCCC---cceeeEeccCc----------c----ceEEEEE--cCCEEEEEe
Q 016224 289 GS-MDNSIRVWNLET---LQCIQTLTEHT----------S----VVMSLLC--WDQFLLSCS 330 (393)
Q Consensus 289 g~-~dg~i~iwd~~~---~~~~~~~~~~~----------~----~v~~l~~--~~~~l~s~s 330 (393)
+. ..+.|.+||+.. .+.+..+.... . .-..+.+ ++++|+++.
T Consensus 338 Snrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 338 SLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 55 478999999853 45555554320 0 1234444 488888877
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.37 E-value=0.00019 Score=62.15 Aligned_cols=185 Identities=11% Similarity=0.019 Sum_probs=122.5
Q ss_pred eEEeeEecC-cEEEec---CCCeEEEEECCCCcEEEEEecCCc-CCEEEEEecCCCCEEEEEe-CCCcEEEEECCCCeEE
Q 016224 112 ILCRNWVQG-NCMYGE---KCKFLHSWTVGDGFKLLTQLEGHQ-KVVSGITLPSGSDKLYSGS-KDETVRVWDCASGQCA 185 (393)
Q Consensus 112 i~c~~~~~~-~~~~g~---~dg~i~vwd~~~~~~~~~~l~~h~-~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~~~~~~ 185 (393)
..-+.|+++ .++.++ .++.|++.|+.++ +.+..+.-.. .-...+++. ++.|+.+. .++.|.++|..+.+.+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTG-KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTC-CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCC-CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 356778874 444433 3689999999999 7777764221 222345554 44565554 5789999999999999
Q ss_pred EEEecC-CceEEEEeCCCEEEEE-cCCeEEEEECCCCcee-eecC-----CCCcEEEEEEeCCEEEEEe-CCCcEEEEEe
Q 016224 186 GVINLG-GEVGCMISEGPWIFIG-VTNFVKAWNTQTNTDL-SLSG-----PVGQVYAMAVGNDLLFAGT-QDGAILAWKF 256 (393)
Q Consensus 186 ~~~~~~-~~~~~~~~~~~~l~~~-~~~~i~v~d~~~~~~~-~~~~-----~~~~v~~l~~~~~~l~~~~-~dg~I~vwd~ 256 (393)
.++..+ ..-..+.++++.++++ .++.|.++|..+.+.. .+.- ....+..+.+....+++.. .++.|.+.|.
T Consensus 100 ~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 100 KNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEET
T ss_pred EEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEEC
Confidence 999866 4444466677766665 5679999999998766 2221 1124677888755554444 5789999999
Q ss_pred ccCCccccCceeecCc-------------eeeEEEEEEc--CC-EEEEecCCCcEEEeeCCCc
Q 016224 257 NVTTNCFEPAASLKGH-------------SLAVVSLVVG--AN-KLYSGSMDNSIRVWNLETL 303 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~-------------~~~v~~l~~~--~~-~l~sg~~dg~i~iwd~~~~ 303 (393)
.++. .+..+.-. ......++++ ++ .++++...+.|.+.++...
T Consensus 180 ~tg~----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 180 KDGT----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTCC----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCc----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 8874 23333211 1244677776 33 5777778889998887654
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.27 E-value=0.00019 Score=68.85 Aligned_cols=217 Identities=8% Similarity=0.087 Sum_probs=129.1
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEec---------------------C------------C------cCCEEEEEecC--
Q 016224 122 CMYGEKCKFLHSWTVGDGFKLLTQLE---------------------G------------H------QKVVSGITLPS-- 160 (393)
Q Consensus 122 ~~~g~~dg~i~vwd~~~~~~~~~~l~---------------------~------------h------~~~I~~i~~s~-- 160 (393)
+.+|+..|.++|+-+.++ +.++.+. . + .+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~-r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSM-RELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EECCBTTCEEEEEEETTC-CEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EeeCCcCceEEEEecCCc-ceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 456889999999998887 4444432 0 0 01222344444
Q ss_pred ---CCCEEEEEeCC-CcEEEEECCCCeEEEEEecC--CceEEEE----eCCCEEEEEc-------------------CCe
Q 016224 161 ---GSDKLYSGSKD-ETVRVWDCASGQCAGVINLG--GEVGCMI----SEGPWIFIGV-------------------TNF 211 (393)
Q Consensus 161 ---~~~~l~s~s~d-g~v~iwd~~~~~~~~~~~~~--~~~~~~~----~~~~~l~~~~-------------------~~~ 211 (393)
||++|+....+ ..|.+.|+.+.++...+..+ .....+. +++++++++. ++.
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 78888887664 57999999999998866543 3333332 6888888873 247
Q ss_pred EEEEECCCCceeeecCCCCcEEEEEEeCC--EEEEEeCCC--------------------------------------cE
Q 016224 212 VKAWNTQTNTDLSLSGPVGQVYAMAVGND--LLFAGTQDG--------------------------------------AI 251 (393)
Q Consensus 212 i~v~d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~dg--------------------------------------~I 251 (393)
+.+.|..+.+......-.+....++++++ ++++.+.+. .|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 89999998876622111113445566666 665555442 24
Q ss_pred EEEEeccCCccccC-ceeec-CceeeEEEEEEcCCE-EEEecCCCcEEEeeCCCcc------------eeeEeccCccce
Q 016224 252 LAWKFNVTTNCFEP-AASLK-GHSLAVVSLVVGANK-LYSGSMDNSIRVWNLETLQ------------CIQTLTEHTSVV 316 (393)
Q Consensus 252 ~vwd~~~~~~~~~~-~~~~~-~~~~~v~~l~~~~~~-l~sg~~dg~i~iwd~~~~~------------~~~~~~~~~~~v 316 (393)
.+.|..+... .. +..+. +....-..+++++++ ++++..+.+|.++|+.+.+ .+.++... ..-
T Consensus 257 ~VID~~~~~~--~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP 333 (595)
T 1fwx_A 257 KVVDGRKEAS--SLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGP 333 (595)
T ss_dssp EEEECSGGGC--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCE
T ss_pred EEEeCcccCC--ceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCc
Confidence 4444443110 11 11111 111112344556776 5555578999999998753 23333322 234
Q ss_pred EEEEEc--CCEEEEEeCCCcEEEEEcCC
Q 016224 317 MSLLCW--DQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 317 ~~l~~~--~~~l~s~s~dg~i~iwd~~~ 342 (393)
..++|+ |...++.-.|++|.+||+.+
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 667777 53344666799999999976
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.24 E-value=0.00064 Score=60.86 Aligned_cols=223 Identities=9% Similarity=0.007 Sum_probs=126.5
Q ss_pred EEeeEecC-c-EEEecCCCeEEEEECCCCcEEEE-EecC------------------CcCCEEEEEecCCCCEEEEEeCC
Q 016224 113 LCRNWVQG-N-CMYGEKCKFLHSWTVGDGFKLLT-QLEG------------------HQKVVSGITLPSGSDKLYSGSKD 171 (393)
Q Consensus 113 ~c~~~~~~-~-~~~g~~dg~i~vwd~~~~~~~~~-~l~~------------------h~~~I~~i~~s~~~~~l~s~s~d 171 (393)
.+++|.++ . ++++..++.|..|+..++ +... .... ....+..|++.++...|+.+...
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNS-GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTT-CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCC-ceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 34555544 3 567778899999998765 2221 1110 11357899999733456666555
Q ss_pred CcEEEEECCCCeEEEEEec-C----Cce--EEEEe-CCCEEEEEcC------------------CeEEEEECCCCceeee
Q 016224 172 ETVRVWDCASGQCAGVINL-G----GEV--GCMIS-EGPWIFIGVT------------------NFVKAWNTQTNTDLSL 225 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~-~----~~~--~~~~~-~~~~l~~~~~------------------~~i~v~d~~~~~~~~~ 225 (393)
+.|..+|..+++....... . ... ..+.+ ++.+.++... +.|..+|..+++...+
T Consensus 101 ~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 101 YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 6688888776543222111 1 112 22334 6666666432 5688888877665433
Q ss_pred cCCCCcEEEEEEeCC--EEEEE-eCCCcEEEEEeccCCcc-ccCceeecCceeeEEEEEEc--CCEEEEecC--------
Q 016224 226 SGPVGQVYAMAVGND--LLFAG-TQDGAILAWKFNVTTNC-FEPAASLKGHSLAVVSLVVG--ANKLYSGSM-------- 291 (393)
Q Consensus 226 ~~~~~~v~~l~~~~~--~l~~~-~~dg~I~vwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~-------- 291 (393)
.........++++++ .|+++ +..+.|.+|++...... .+....+.+ ...++++ +++.++...
T Consensus 181 ~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~~d~~G~l~va~~~~~~~~~~~ 256 (322)
T 2fp8_A 181 LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN----PGNIKRNADGHFWVSSSEELDGNMHG 256 (322)
T ss_dssp EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS----EEEEEECTTSCEEEEEEEETTSSTTS
T ss_pred ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC----CCCeEECCCCCEEEEecCcccccccC
Confidence 222334567889887 45444 56789999998753210 111111111 4455665 555444433
Q ss_pred --CCcEEEeeCCCcceeeEeccCc----cceEEEEEcCCEEE-EEeCCCcEEEEEcC
Q 016224 292 --DNSIRVWNLETLQCIQTLTEHT----SVVMSLLCWDQFLL-SCSLDKTIKVWFAT 341 (393)
Q Consensus 292 --dg~i~iwd~~~~~~~~~~~~~~----~~v~~l~~~~~~l~-s~s~dg~i~iwd~~ 341 (393)
.+.|..+|.. ++.+..+.... ..+..+.+.+..|+ +....+.|..+++.
T Consensus 257 ~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 257 RVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred CCccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 4678889874 77777775432 34556666644444 44467788888875
No 259
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.23 E-value=0.00089 Score=58.99 Aligned_cols=213 Identities=11% Similarity=0.127 Sum_probs=134.1
Q ss_pred CcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC-EEEEEeCCCc
Q 016224 172 ETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGA 250 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~~~dg~ 250 (393)
..|.|-|+..+..+...........+.+..++++.-....+.++|+++...+........|.--.|-.+ .|+..+ +..
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT-~ta 127 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-DNA 127 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEE-SSE
T ss_pred CEEEEEECCCCCCccccccccceeeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEc-CCc
Confidence 367888888776666666666777777788888877777899999999888855555677888888554 555544 567
Q ss_pred EEEEEeccCCccccCceeecCc----eeeEEEEEEcC--CEEE-Eec------CCCcEEEeeCCCcceeeEeccCccceE
Q 016224 251 ILAWKFNVTTNCFEPAASLKGH----SLAVVSLVVGA--NKLY-SGS------MDNSIRVWNLETLQCIQTLTEHTSVVM 317 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~~~~----~~~v~~l~~~~--~~l~-sg~------~dg~i~iwd~~~~~~~~~~~~~~~~v~ 317 (393)
|+-|++.... .+.+.+..| ...|.....+. ++++ +|- -.|.+.+|..+. +.-+.+++|.+...
T Consensus 128 VyHWs~~~~s---~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~ 203 (365)
T 2xzh_A 128 VYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFA 203 (365)
T ss_dssp EEEEESSTTC---CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEE
T ss_pred EEEEcccCCC---CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeE
Confidence 9999987633 444444333 24455555553 3332 222 247889999874 45677888887776
Q ss_pred EEEEcCC-----EEEEEeC---CCcEEEEEcCCC---c-----ceEEEEeecC--CccEEEEEeeeCCCCCcEEEEEeCC
Q 016224 318 SLLCWDQ-----FLLSCSL---DKTIKVWFATDS---G-----NLEVTYTHNE--EHGVLALCGMPDSEGKPVLLCSCND 379 (393)
Q Consensus 318 ~l~~~~~-----~l~s~s~---dg~i~iwd~~~~---~-----~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~s~s~d 379 (393)
.+...++ .++-+.. .++++|-++... . +...+....+ ..--.++..++... +++.-+.-
T Consensus 204 ~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg---viyviTK~ 280 (365)
T 2xzh_A 204 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLITKY 280 (365)
T ss_dssp EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT---EEEEEETT
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC---EEEEEeCC
Confidence 6666532 2332322 258899888443 1 1111111111 11233444444333 78888899
Q ss_pred CeEEEEeCCceee
Q 016224 380 NSVRFYDLPSVII 392 (393)
Q Consensus 380 g~I~iwd~~s~~l 392 (393)
|.|++||++|+.+
T Consensus 281 G~ihlyDleTgt~ 293 (365)
T 2xzh_A 281 GYIHLYDLETGTC 293 (365)
T ss_dssp SEEEEEETTTCCE
T ss_pred cEEEEEEcccCcE
Confidence 9999999999875
No 260
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.15 E-value=0.0031 Score=54.62 Aligned_cols=216 Identities=11% Similarity=0.060 Sum_probs=117.6
Q ss_pred EEEEEeCCCcEEEEECCCCeE-----EEEEecC-Cce--EEEEeCCCEEEEE--cCCeEEEEECCCCceeeec-CCCCcE
Q 016224 164 KLYSGSKDETVRVWDCASGQC-----AGVINLG-GEV--GCMISEGPWIFIG--VTNFVKAWNTQTNTDLSLS-GPVGQV 232 (393)
Q Consensus 164 ~l~s~s~dg~v~iwd~~~~~~-----~~~~~~~-~~~--~~~~~~~~~l~~~--~~~~i~v~d~~~~~~~~~~-~~~~~v 232 (393)
+|+.+.. +.|+.++++.... ...+..+ ... ..+.+++..|+.+ ..+.|..++........+. ......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 4677788765432 1111111 111 2223345555544 4569999999876544332 333578
Q ss_pred EEEEEeCC---EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecC---CCcEEEeeCCCcc
Q 016224 233 YAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSM---DNSIRVWNLETLQ 304 (393)
Q Consensus 233 ~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~---dg~i~iwd~~~~~ 304 (393)
..++++++ ++++-...+.|.++++..... . ............++++ +..|+.+.. .+.|..+++.. +
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~--~--~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~ 156 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR--R--VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-T 156 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC--E--EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-C
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--E--EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-C
Confidence 89999874 445555678899998865321 1 1111111234566665 455555443 46888888753 3
Q ss_pred eeeEec-cCccceEEEEEc--CCEEE-EEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCC
Q 016224 305 CIQTLT-EHTSVVMSLLCW--DQFLL-SCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDN 380 (393)
Q Consensus 305 ~~~~~~-~~~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg 380 (393)
....+. ........++++ ++.|+ +-...+.|.++|+..... ..+... ......++. + ++.++++....+
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~--~~~P~gi~~--d--~~~lyva~~~~~ 229 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLEG--LQYPFAVTS--Y--GKNLYYTDWKTN 229 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEEC--CCSEEEEEE--E--TTEEEEEETTTT
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEecC--CCCceEEEE--e--CCEEEEEECCCC
Confidence 333332 223345778886 45554 455568899999864322 222221 122344443 3 233455555678
Q ss_pred eEEEEeCCceee
Q 016224 381 SVRFYDLPSVII 392 (393)
Q Consensus 381 ~I~iwd~~s~~l 392 (393)
.|.++|..++++
T Consensus 230 ~v~~~d~~~g~~ 241 (267)
T 1npe_A 230 SVIAMDLAISKE 241 (267)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEeCCCCCc
Confidence 999999987764
No 261
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.15 E-value=0.0006 Score=65.44 Aligned_cols=223 Identities=15% Similarity=0.096 Sum_probs=140.7
Q ss_pred ecCCCeEEEEECCCCcEEEEEecC-CcCCEEEEEe-c-CCCCEEEEEe------------------CCCcEEEEECCCCe
Q 016224 125 GEKCKFLHSWTVGDGFKLLTQLEG-HQKVVSGITL-P-SGSDKLYSGS------------------KDETVRVWDCASGQ 183 (393)
Q Consensus 125 g~~dg~i~vwd~~~~~~~~~~l~~-h~~~I~~i~~-s-~~~~~l~s~s------------------~dg~v~iwd~~~~~ 183 (393)
...+..|.+.|+.+. +....+.- ....+..+++ + |++++++.++ .++.|.+.|.++.+
T Consensus 108 d~~~~rVavIdl~t~-~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 108 DKANTRVARVRCDVM-KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE 186 (595)
T ss_dssp ETTTTEEEEEETTTT-EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE
T ss_pred cCCCCEEEEEECCCc-eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe
Confidence 455678999999997 77774442 2356889998 5 9999999885 24689999999999
Q ss_pred EEEEEecCCce--EEEEeCCCEEEEEcCC---------------------------------------eEEEEECCC--C
Q 016224 184 CAGVINLGGEV--GCMISEGPWIFIGVTN---------------------------------------FVKAWNTQT--N 220 (393)
Q Consensus 184 ~~~~~~~~~~~--~~~~~~~~~l~~~~~~---------------------------------------~i~v~d~~~--~ 220 (393)
...++...... ..+.++++++++...+ .|.+.|..+ +
T Consensus 187 v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~ 266 (595)
T 1fwx_A 187 VAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS 266 (595)
T ss_dssp EEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC
T ss_pred EEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC
Confidence 99988764332 3344577777765321 366667666 3
Q ss_pred ce-eeecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEeccCCcc----c----cCceeecCceeeEEEEEEc--CCEE
Q 016224 221 TD-LSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNC----F----EPAASLKGHSLAVVSLVVG--ANKL 286 (393)
Q Consensus 221 ~~-~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~----~----~~~~~~~~~~~~v~~l~~~--~~~l 286 (393)
+. +..........++.++|| .++++..+.+|.++|+.+.... . ....... -......++|+ +...
T Consensus 267 ~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY 345 (595)
T 1fwx_A 267 SLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAY 345 (595)
T ss_dssp CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEE
T ss_pred ceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEE
Confidence 33 222222335567888998 5566667899999999864210 0 0111111 12234556665 5334
Q ss_pred EEecCCCcEEEeeCCC----------cceeeEeccCccceE-EE------EEcCCEEEEEeC---CCcE----------E
Q 016224 287 YSGSMDNSIRVWNLET----------LQCIQTLTEHTSVVM-SL------LCWDQFLLSCSL---DKTI----------K 336 (393)
Q Consensus 287 ~sg~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~-~l------~~~~~~l~s~s~---dg~i----------~ 336 (393)
++...|+.|.+||+.+ .+.+.++..|-.+-. .. ..+|++|++... |..+ .
T Consensus 346 ~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~q 425 (595)
T 1fwx_A 346 TSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQ 425 (595)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEE
T ss_pred EEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcce
Confidence 5677899999999977 566777776654321 11 123778887754 3321 8
Q ss_pred EEEcCCCcceEEEE
Q 016224 337 VWFATDSGNLEVTY 350 (393)
Q Consensus 337 iwd~~~~~~~~~~~ 350 (393)
++|+. +.++..+.
T Consensus 426 l~dis-~~~m~lv~ 438 (595)
T 1fwx_A 426 LIDIS-GDKMVLVH 438 (595)
T ss_dssp EEECS-SSSCEEEE
T ss_pred EEEcC-CCcEEEEE
Confidence 89984 44444433
No 262
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.13 E-value=0.0032 Score=58.34 Aligned_cols=180 Identities=12% Similarity=0.074 Sum_probs=106.0
Q ss_pred CCCCEEEE-EeCCCcEEEEECCCC----eEEEEEe-------cCC-ce--EEEEeCCCEEEEE-cC------CeEEEEEC
Q 016224 160 SGSDKLYS-GSKDETVRVWDCASG----QCAGVIN-------LGG-EV--GCMISEGPWIFIG-VT------NFVKAWNT 217 (393)
Q Consensus 160 ~~~~~l~s-~s~dg~v~iwd~~~~----~~~~~~~-------~~~-~~--~~~~~~~~~l~~~-~~------~~i~v~d~ 217 (393)
++.++|+. +-.++.|.|+|+.+. +..+++. ... .. ..+.+++ ++++. .+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77777765 556789999999766 6777773 111 11 2233566 55543 33 58999999
Q ss_pred CCCceeeecC-C---CCcEEEEEEeCC--EEEEEe-------------------CCCcEEEEEeccCCccccCceeecC-
Q 016224 218 QTNTDLSLSG-P---VGQVYAMAVGND--LLFAGT-------------------QDGAILAWKFNVTTNCFEPAASLKG- 271 (393)
Q Consensus 218 ~~~~~~~~~~-~---~~~v~~l~~~~~--~l~~~~-------------------~dg~I~vwd~~~~~~~~~~~~~~~~- 271 (393)
.+.+.+.... . ...-+.+.|+|+ .+++.. .+.+|.+||+.+. +.+..+..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~----k~~~tI~vg 247 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR----KRIHSLTLG 247 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT----EEEEEEESC
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC----cEeeEEecC
Confidence 9998873222 1 123445777887 666653 3789999999875 33333332
Q ss_pred -ceeeEEEEEE--c--CCEEEEec------CCCcEEEeeCCCcce--eeEe--ccC----------------ccceEEEE
Q 016224 272 -HSLAVVSLVV--G--ANKLYSGS------MDNSIRVWNLETLQC--IQTL--TEH----------------TSVVMSLL 320 (393)
Q Consensus 272 -~~~~v~~l~~--~--~~~l~sg~------~dg~i~iwd~~~~~~--~~~~--~~~----------------~~~v~~l~ 320 (393)
.......+.+ + +++++++. .+++|.+|....++. ++.+ ... ......|.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 1122334433 4 55655554 567887766543321 1111 100 12345666
Q ss_pred Ec--CCEEEEEeC-CCcEEEEEcCCCc
Q 016224 321 CW--DQFLLSCSL-DKTIKVWFATDSG 344 (393)
Q Consensus 321 ~~--~~~l~s~s~-dg~i~iwd~~~~~ 344 (393)
++ +++|.++.. .+.|.+||+....
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~ 354 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPF 354 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 66 677766654 7899999986443
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.11 E-value=0.0013 Score=66.28 Aligned_cols=243 Identities=10% Similarity=-0.042 Sum_probs=125.3
Q ss_pred CCcC-CEEEEEec-CCCCEEEEEeC-CC----cEEEEECCCC-eEEE-EEecCCceEEEEeCCCEEEEE-cC-----CeE
Q 016224 148 GHQK-VVSGITLP-SGSDKLYSGSK-DE----TVRVWDCASG-QCAG-VINLGGEVGCMISEGPWIFIG-VT-----NFV 212 (393)
Q Consensus 148 ~h~~-~I~~i~~s-~~~~~l~s~s~-dg----~v~iwd~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~~-~~-----~~i 212 (393)
+|.- .+...+|| |||++||-+.. +| +|+++|+.++ +.+. .+........+.++++.|+.. .+ ..|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 3443 68889999 99998875433 33 5999999998 6321 111111223455677766644 43 268
Q ss_pred EEEECCCCce---eeec-CCCCcEEEEEEeCC--EEEEEe---CCCcEEEEEeccCCccccCceeecCceeeEEEEE-Ec
Q 016224 213 KAWNTQTNTD---LSLS-GPVGQVYAMAVGND--LLFAGT---QDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLV-VG 282 (393)
Q Consensus 213 ~v~d~~~~~~---~~~~-~~~~~v~~l~~~~~--~l~~~~---~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~-~~ 282 (393)
.++++.++.. +.+. ........+.++++ +|+... ....|.++|+..+..................++. ..
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 8888877642 2222 23345678889998 444433 2345788888764211100111122233445555 33
Q ss_pred CCEEEEec-CC----CcEEEeeCCCcceeeE-eccCcc--ceEEEEEcCCE-EEEEeCCCcE--EEEEcC------CCcc
Q 016224 283 ANKLYSGS-MD----NSIRVWNLETLQCIQT-LTEHTS--VVMSLLCWDQF-LLSCSLDKTI--KVWFAT------DSGN 345 (393)
Q Consensus 283 ~~~l~sg~-~d----g~i~iwd~~~~~~~~~-~~~~~~--~v~~l~~~~~~-l~s~s~dg~i--~iwd~~------~~~~ 345 (393)
++.|+..+ .+ ..|..+|+.+...... +..+.. .+..+.+.++. +++...++.. .++++. .+..
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~ 409 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGT 409 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCTTT
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccCCc
Confidence 66544433 32 3677778765322222 222332 45667777654 5566667764 455541 2222
Q ss_pred -eEEEEeecCCccEEEEEeee--CCCCCcEEEEEeCC---CeEEEEeCCcee
Q 016224 346 -LEVTYTHNEEHGVLALCGMP--DSEGKPVLLCSCND---NSVRFYDLPSVI 391 (393)
Q Consensus 346 -~~~~~~~~~~~~v~~~~~~~--~~~~~~~l~s~s~d---g~I~iwd~~s~~ 391 (393)
...+. ......+..+.+.+ ...+..++++.+.. ..+..+|+.+++
T Consensus 410 ~~~~l~-l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 410 GLREVV-MEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp CCEECC-CCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cceEEC-CCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 33322 11222233443332 22333455555443 457777776653
No 264
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.10 E-value=0.0021 Score=58.90 Aligned_cols=213 Identities=11% Similarity=0.148 Sum_probs=134.7
Q ss_pred CcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEE-eCCEEEEEeCCCc
Q 016224 172 ETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAV-GNDLLFAGTQDGA 250 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~-~~~~l~~~~~dg~ 250 (393)
..|.|-|+..+..+...........+.+..++++.-....+.++|+++...+........|.-..| +++.|+..+ +..
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT-~ta 126 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-DNA 126 (494)
T ss_dssp CEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC-SSE
T ss_pred CeEEEEECCCCCcceecccccceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc-CCe
Confidence 367788888776666666666777777777877777778899999998887755554556666676 455555544 567
Q ss_pred EEEEEeccCCccccCceeecCc----eeeEEEEEEcC--CEEE-Eec------CCCcEEEeeCCCcceeeEeccCccceE
Q 016224 251 ILAWKFNVTTNCFEPAASLKGH----SLAVVSLVVGA--NKLY-SGS------MDNSIRVWNLETLQCIQTLTEHTSVVM 317 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~~~~----~~~v~~l~~~~--~~l~-sg~------~dg~i~iwd~~~~~~~~~~~~~~~~v~ 317 (393)
|+-|++.... .+.+.+..| ...|.....+. ++++ +|- -.|.+.+|..+. +.-+.+++|.+...
T Consensus 127 VyHWsi~~~s---~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~ 202 (494)
T 1bpo_A 127 VYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFA 202 (494)
T ss_dssp EEEEESSSSC---CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEE
T ss_pred eEEecccCCC---CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeE
Confidence 9999987533 444444433 24455555553 3433 222 247889999874 44577888988877
Q ss_pred EEEEcCC-----EEEEEeCC---CcEEEEEcCCC--c------ceEEEEeecC--CccEEEEEeeeCCCCCcEEEEEeCC
Q 016224 318 SLLCWDQ-----FLLSCSLD---KTIKVWFATDS--G------NLEVTYTHNE--EHGVLALCGMPDSEGKPVLLCSCND 379 (393)
Q Consensus 318 ~l~~~~~-----~l~s~s~d---g~i~iwd~~~~--~------~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~s~s~d 379 (393)
.+...++ .++-+... ++++|-++... . +...+..... ..--.++..++... +++.-+.-
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg---viyviTK~ 279 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLITKY 279 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT---EEEEEETT
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC---EEEEEecC
Confidence 7777642 33434332 78999988543 1 1111111111 11233444444433 78888899
Q ss_pred CeEEEEeCCceee
Q 016224 380 NSVRFYDLPSVII 392 (393)
Q Consensus 380 g~I~iwd~~s~~l 392 (393)
|.|++||++|+.+
T Consensus 280 G~i~lyDleTgt~ 292 (494)
T 1bpo_A 280 GYIHLYDLETGTC 292 (494)
T ss_dssp SEEEEEETTTCCE
T ss_pred ceEEEEeccccee
Confidence 9999999999865
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.08 E-value=0.0013 Score=58.85 Aligned_cols=228 Identities=12% Similarity=0.085 Sum_probs=124.6
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC--------------------CceEEE--Ee-CCCEEEEE
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG--------------------GEVGCM--IS-EGPWIFIG 207 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--------------------~~~~~~--~~-~~~~l~~~ 207 (393)
....++++++++++++++..++.|..|+..+++........ ..+..+ .+ ++.++++.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 34566889999988888888999999998776543221100 122222 23 45555555
Q ss_pred cCCeEEEEECCCCceeeecC-----CCCcEEEEEEeC-C-EEEEEeC------------------CCcEEEEEeccCCcc
Q 016224 208 VTNFVKAWNTQTNTDLSLSG-----PVGQVYAMAVGN-D-LLFAGTQ------------------DGAILAWKFNVTTNC 262 (393)
Q Consensus 208 ~~~~i~v~d~~~~~~~~~~~-----~~~~v~~l~~~~-~-~l~~~~~------------------dg~I~vwd~~~~~~~ 262 (393)
..+.|..+|..++....+.. .......+++.+ + .|+++.. ++.|..+|...+..
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~- 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET- 177 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE-
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE-
Confidence 66668888887664332211 123567889988 6 3443332 36677777654321
Q ss_pred ccCceeecCceeeEEEEEEc--CCEEEEe-cCCCcEEEeeCCCcc--eeeEeccCccceEEEEEc--CCEEEEEeC----
Q 016224 263 FEPAASLKGHSLAVVSLVVG--ANKLYSG-SMDNSIRVWNLETLQ--CIQTLTEHTSVVMSLLCW--DQFLLSCSL---- 331 (393)
Q Consensus 263 ~~~~~~~~~~~~~v~~l~~~--~~~l~sg-~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~--~~~l~s~s~---- 331 (393)
. .+.........++++ ++.|+.+ ...+.|.+|++.... ....+..... ...++++ +++.++...
T Consensus 178 -~---~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 178 -T---LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp -E---EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred -E---EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 1 111011112345554 5555544 567899999987421 1112211122 5567776 555555433
Q ss_pred ------CCcEEEEEcCCCcceEEEEeecC--CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 332 ------DKTIKVWFATDSGNLEVTYTHNE--EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 332 ------dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
.+.|..+|.. ++.+..+..... ...+..+++ . ++.++++....+.|..+++..
T Consensus 253 ~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~---~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-H---DGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp STTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-E---TTEEEEECSSCSEEEEEEC--
T ss_pred cccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-e---CCEEEEeecCCCceEEEeccc
Confidence 4668888763 444444443221 122444443 2 333666666788999998864
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.04 E-value=0.0077 Score=55.39 Aligned_cols=233 Identities=9% Similarity=0.017 Sum_probs=134.7
Q ss_pred eEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE-eCCCcEEEEECCCCeEEEEEec
Q 016224 112 ILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG-SKDETVRVWDCASGQCAGVINL 190 (393)
Q Consensus 112 i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd~~~~~~~~~~~~ 190 (393)
..|....+...++-+....|+..++... .....+. ....+..++|++.+..|+.+ ...+.|..+++........+..
T Consensus 79 ~~C~~~~~~~~l~~~~~~~I~~i~~~~~-~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 79 RSCKALGPEPVLLFANRIDIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp SCEEECSSCCEEEEECBSCEEEECTTSC-CCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred CeECCccccceeEeecCccceeeccCCC-cEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 3455554455555555677888888765 3333333 34567899999766655544 4568899999887654444332
Q ss_pred C--Cce-EEEEeCCCEE-EEE-cCCeEEEEECCCCcee-eecCCCCcEEEEEEeCC--EE-EEEeCC-CcEEEEEeccCC
Q 016224 191 G--GEV-GCMISEGPWI-FIG-VTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGND--LL-FAGTQD-GAILAWKFNVTT 260 (393)
Q Consensus 191 ~--~~~-~~~~~~~~~l-~~~-~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~--~l-~~~~~d-g~I~vwd~~~~~ 260 (393)
. .+. ..+...+..| ++. ..+.|.+.++...... ...........++++|. .| ++-... +.|..+++....
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 2 222 2333334444 444 4568888888765443 33344467889999975 44 443344 678888776532
Q ss_pred ccccCceeecCceeeEEEEEEc--CCE-EEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCC-EEEEEeCCCcEE
Q 016224 261 NCFEPAASLKGHSLAVVSLVVG--ANK-LYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQ-FLLSCSLDKTIK 336 (393)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~l~~~--~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~s~s~dg~i~ 336 (393)
. .......-.....|+++ ++. .++-+..+.|..+|+........+.........+++.+. ++++-...+.|.
T Consensus 237 ~----~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~ 312 (386)
T 3v65_B 237 R----RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSIN 312 (386)
T ss_dssp C----EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEE
T ss_pred c----EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEE
Confidence 1 11111122234556664 444 445556778999998754333333333334456666644 455555678899
Q ss_pred EEEcCCCcceEEEE
Q 016224 337 VWFATDSGNLEVTY 350 (393)
Q Consensus 337 iwd~~~~~~~~~~~ 350 (393)
.++..+++....+.
T Consensus 313 ~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 313 SANKFTGKNQEIIR 326 (386)
T ss_dssp EEETTTCCSCEEEE
T ss_pred EEECCCCcceEEEc
Confidence 99866666655554
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.00 E-value=0.0005 Score=68.19 Aligned_cols=213 Identities=14% Similarity=0.140 Sum_probs=115.0
Q ss_pred eEEEEECCCC-cEEEEEec-CCcCCEEEEEecCCCCEEEEEeC-CCcEEEEECCCCeEEEEEecCC----ceEEEEeCCC
Q 016224 130 FLHSWTVGDG-FKLLTQLE-GHQKVVSGITLPSGSDKLYSGSK-DETVRVWDCASGQCAGVINLGG----EVGCMISEGP 202 (393)
Q Consensus 130 ~i~vwd~~~~-~~~~~~l~-~h~~~I~~i~~s~~~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~ 202 (393)
.+.+||..++ +..+..+. .+.....++++..++++++.|+. +..+.+||..+.+-...-..+. ......++++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 5888998765 22233332 23333345677889999999984 4689999998876443322221 1223334888
Q ss_pred EEEEEc--C-----CeEEEEECCCCceeeecCC-----CCc-EEEEE-EeCCEEEEEeCCC---------cEEEEEeccC
Q 016224 203 WIFIGV--T-----NFVKAWNTQTNTDLSLSGP-----VGQ-VYAMA-VGNDLLFAGTQDG---------AILAWKFNVT 259 (393)
Q Consensus 203 ~l~~~~--~-----~~i~v~d~~~~~~~~~~~~-----~~~-v~~l~-~~~~~l~~~~~dg---------~I~vwd~~~~ 259 (393)
+++.|. + ..+.+||..+++-..+... ... -.++. .....++.++.+| .+..||....
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred EEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence 888764 2 4799999988765443110 000 00011 1122445554444 4567777654
Q ss_pred CccccCceeecC------ceeeEEEEE---EcCCEEEEecCCC-----------cEEEeeCCCcceeeEe--ccCcc--c
Q 016224 260 TNCFEPAASLKG------HSLAVVSLV---VGANKLYSGSMDN-----------SIRVWNLETLQCIQTL--TEHTS--V 315 (393)
Q Consensus 260 ~~~~~~~~~~~~------~~~~v~~l~---~~~~~l~sg~~dg-----------~i~iwd~~~~~~~~~~--~~~~~--~ 315 (393)
.-. ........ ....-.++. .++.+++.|+.++ .|.+||..+.+-.... ..+.. .
T Consensus 380 ~w~-~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~ 458 (656)
T 1k3i_A 380 GDV-KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTF 458 (656)
T ss_dssp CEE-EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBS
T ss_pred cee-ecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCccc
Confidence 211 11110000 000112332 2466777777532 6888998876543332 11222 2
Q ss_pred eEEEEE-cCCEEEEEeCC-----------CcEEEEEcCCC
Q 016224 316 VMSLLC-WDQFLLSCSLD-----------KTIKVWFATDS 343 (393)
Q Consensus 316 v~~l~~-~~~~l~s~s~d-----------g~i~iwd~~~~ 343 (393)
..++.. .+++++.|+.+ ..+.+||..+.
T Consensus 459 ~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 459 HTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp CEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 233444 57888888764 46899998654
No 268
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.98 E-value=0.0075 Score=53.18 Aligned_cols=247 Identities=8% Similarity=0.097 Sum_probs=156.4
Q ss_pred CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEE-eCCCEEE
Q 016224 127 KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMI-SEGPWIF 205 (393)
Q Consensus 127 ~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 205 (393)
.+..|.|.|+.++.+..+.-..-.++| .+|..+.||-=. ..++.|+|+++.+.+..+...+.+..+- -+...|+
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~AdsAI----MnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~ 121 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISADSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 121 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCCSEEE----ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEE
T ss_pred CCCEEEEEECCCCCCccccccccceee----eCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEE
Confidence 344788999987655544444344444 488888777655 6799999999999999999998887765 4777788
Q ss_pred EEcCCeEEEEECCCCce-e-eecCC----CCcEEEEEEeCC---EEEEEe------CCCcEEEEEeccCCccccCceeec
Q 016224 206 IGVTNFVKAWNTQTNTD-L-SLSGP----VGQVYAMAVGND---LLFAGT------QDGAILAWKFNVTTNCFEPAASLK 270 (393)
Q Consensus 206 ~~~~~~i~v~d~~~~~~-~-~~~~~----~~~v~~l~~~~~---~l~~~~------~dg~I~vwd~~~~~~~~~~~~~~~ 270 (393)
.-.+..|+.|++..... . .+..| ..+|.....+++ .+++|- -.|.+.+|..+.. ..+.++
T Consensus 122 lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----~sQ~ie 196 (365)
T 2xzh_A 122 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----VSQPIE 196 (365)
T ss_dssp EEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-----EEEEEC
T ss_pred EEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-----ccceee
Confidence 88899999999975332 2 22222 356777777777 333332 2366788877653 346778
Q ss_pred CceeeEEEEEEcCC-----EEEEec---CCCcEEEeeCCCc---ce------eeEecc---CccceEEEEEcC--CEEEE
Q 016224 271 GHSLAVVSLVVGAN-----KLYSGS---MDNSIRVWNLETL---QC------IQTLTE---HTSVVMSLLCWD--QFLLS 328 (393)
Q Consensus 271 ~~~~~v~~l~~~~~-----~l~sg~---~dg~i~iwd~~~~---~~------~~~~~~---~~~~v~~l~~~~--~~l~s 328 (393)
+|...-..+..+++ .|+.+. ..+.++|.++... .. +..+-. ..+--.++..+. ..+..
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 88877766666544 233222 2368899888432 11 111111 123335666664 46788
Q ss_pred EeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 329 CSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 329 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
-..-|.|.+||+.++..+..-.-.... +..-+...... =++.-...|.|.--.+.
T Consensus 277 iTK~G~ihlyDleTgt~i~~nrIS~d~--iF~ta~~~~~~---Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCIYMNRISGET--IFVTAPHEATA---GIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSC--EEEEEEEGGGT---EEEEEETTCEEEEEEEC
T ss_pred EeCCcEEEEEEcccCcEEEEeccCCCc--eEEecccCCCC---cEEEEcCCCEEEEEEEC
Confidence 889999999999998876655443333 43333322222 24455577776655444
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.87 E-value=0.014 Score=52.78 Aligned_cols=233 Identities=9% Similarity=0.026 Sum_probs=133.7
Q ss_pred eEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe-CCCcEEEEECCCCeEEEEEec
Q 016224 112 ILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVRVWDCASGQCAGVINL 190 (393)
Q Consensus 112 i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~ 190 (393)
.+|....++..+.-+....|+..++... .....+. ....+..++|++....|+-+. ..+.|..+++........+..
T Consensus 36 ~~C~~~~~~~~ll~~~~~~I~~i~~~g~-~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 36 RSCKALGPEPVLLFANRIDIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SCEEESSSCCEEEEECBSCEEEECTTSC-CEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CcccccccCceeEeecccceEEEeCCCC-eeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 3555554444444445566888887665 4433343 334578999997666665554 568899999887654443332
Q ss_pred C--Cce-EEEEeCCCEE-EEE-cCCeEEEEECCCCceee-ecCCCCcEEEEEEeCC---EEEEEeCC-CcEEEEEeccCC
Q 016224 191 G--GEV-GCMISEGPWI-FIG-VTNFVKAWNTQTNTDLS-LSGPVGQVYAMAVGND---LLFAGTQD-GAILAWKFNVTT 260 (393)
Q Consensus 191 ~--~~~-~~~~~~~~~l-~~~-~~~~i~v~d~~~~~~~~-~~~~~~~v~~l~~~~~---~l~~~~~d-g~I~vwd~~~~~ 260 (393)
. .+. ..+...+..| ++. ..+.|.+.++....... ..........++++|. ++++-... +.|..+++....
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 2 222 2233334444 444 45689999987655443 3344567789999974 44444444 778888876532
Q ss_pred ccccCceeecCceeeEEEEEEc--CCEEE-EecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCE-EEEEeCCCcEE
Q 016224 261 NCFEPAASLKGHSLAVVSLVVG--ANKLY-SGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQF-LLSCSLDKTIK 336 (393)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-l~s~s~dg~i~ 336 (393)
. . ......-.....|+++ ++.|+ +-...+.|..+|+........+.........+++.+.. +++-...+.|.
T Consensus 194 ~--~--~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~ 269 (349)
T 3v64_C 194 R--R--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSIN 269 (349)
T ss_dssp C--E--ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEE
T ss_pred c--E--EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEE
Confidence 1 1 1111112234566665 45544 44556789999987533322233233344566666544 45555677888
Q ss_pred EEEcCCCcceEEEE
Q 016224 337 VWFATDSGNLEVTY 350 (393)
Q Consensus 337 iwd~~~~~~~~~~~ 350 (393)
.++..+++....+.
T Consensus 270 ~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 270 SANKFTGKNQEIIR 283 (349)
T ss_dssp EEETTTCCSCEEEE
T ss_pred EEEccCCCccEEec
Confidence 88865665555443
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.86 E-value=0.00034 Score=69.36 Aligned_cols=229 Identities=10% Similarity=0.019 Sum_probs=119.7
Q ss_pred EEEecC-CCCEEEEEeCCC-----------cEEEEECCCCeEEE--EEecCC--c--eEEEEeCCCEEEEEc--CCeEEE
Q 016224 155 GITLPS-GSDKLYSGSKDE-----------TVRVWDCASGQCAG--VINLGG--E--VGCMISEGPWIFIGV--TNFVKA 214 (393)
Q Consensus 155 ~i~~s~-~~~~l~s~s~dg-----------~v~iwd~~~~~~~~--~~~~~~--~--~~~~~~~~~~l~~~~--~~~i~v 214 (393)
.+++.+ ++++++.|+.+. .+.+||..+++-.. .+.... . ..++..++++++.|. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 888888887643 58899998875332 222211 1 133446788888873 458999
Q ss_pred EECCCCceeeecC---CCCcEEEEEE-eCCEEEEEe-CC-----CcEEEEEeccCCccccCc-----eeecCceeeEEEE
Q 016224 215 WNTQTNTDLSLSG---PVGQVYAMAV-GNDLLFAGT-QD-----GAILAWKFNVTTNCFEPA-----ASLKGHSLAVVSL 279 (393)
Q Consensus 215 ~d~~~~~~~~~~~---~~~~v~~l~~-~~~~l~~~~-~d-----g~I~vwd~~~~~~~~~~~-----~~~~~~~~~v~~l 279 (393)
||..+++-..+.. .........+ ...+++.|+ .+ ..+.+||..+..- +.+ ..+...... ..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W--~~~~~~~~~p~~~~~~~-~~~ 346 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW--TSLPNAKVNPMLTADKQ-GLY 346 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE--EEETTSCSGGGCCCCTT-GGG
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc--eeCCCcccccccccccc-cee
Confidence 9998876543321 2222233333 333777777 34 5688999876431 111 000000000 000
Q ss_pred EEcCCEEEEecC---------CCcEEEeeCCCcceeeEeccCcc---------ceEEEEE---cCCEEEEEeCCC-----
Q 016224 280 VVGANKLYSGSM---------DNSIRVWNLETLQCIQTLTEHTS---------VVMSLLC---WDQFLLSCSLDK----- 333 (393)
Q Consensus 280 ~~~~~~l~sg~~---------dg~i~iwd~~~~~~~~~~~~~~~---------~v~~l~~---~~~~l~s~s~dg----- 333 (393)
..++..++.|+. ...+..||..+.........+.. .-.++.+ .+++++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 112233333333 34678888887654433322221 2234443 366777777543
Q ss_pred ------cEEEEEcCCCcceEEEE--eecCCccEEEEEeeeCCCCCcEEEEEeCC-----------CeEEEEeCCce
Q 016224 334 ------TIKVWFATDSGNLEVTY--THNEEHGVLALCGMPDSEGKPVLLCSCND-----------NSVRFYDLPSV 390 (393)
Q Consensus 334 ------~i~iwd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~l~s~s~d-----------g~I~iwd~~s~ 390 (393)
.|.+||..+..- .... .......-...+..+++ ++++.|+.+ ..+.+||..+.
T Consensus 427 ~~~~~~~v~~yd~~~~~W-~~~~~~~mp~~R~~~~~~~l~~g---~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPN-TVFASNGLYFARTFHTSVVLPDG---STFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp CCCCEEEEECCSTTSCCE-EEECTTCCSSCCBSCEEEECTTS---CEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred cCCcceEEEcCCCCCCCe-eEEccCCCCCCcccCCeEECCCC---CEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 577888765432 2221 11111111223333433 488888754 46899998664
No 271
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.73 E-value=0.027 Score=51.72 Aligned_cols=248 Identities=8% Similarity=0.094 Sum_probs=157.7
Q ss_pred cCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEE-eCCCEE
Q 016224 126 EKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMI-SEGPWI 204 (393)
Q Consensus 126 ~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~l 204 (393)
+....|.|.|+.++.+..+.-..-.+.| .+|..+.||-=. ..++.|+|+++.+.+..+...+.+..+- -+...|
T Consensus 45 ~~~~~vvIiDl~~~~~~~rrpi~AdsAI----MnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l 119 (494)
T 1bpo_A 45 GEQAQVVIIDMNDPSNPIRRPISADSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV 119 (494)
T ss_dssp TTCCEEEEEETTSTTSCEEEECCCSEEE----ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEE
T ss_pred CCCCeEEEEECCCCCcceecccccceee----eCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeE
Confidence 3444889999987645544433333333 578777777655 6799999999999999999988877664 467777
Q ss_pred EEEcCCeEEEEECCCCce-e-eecCC----CCcEEEEEEeCC---EEEEEe------CCCcEEEEEeccCCccccCceee
Q 016224 205 FIGVTNFVKAWNTQTNTD-L-SLSGP----VGQVYAMAVGND---LLFAGT------QDGAILAWKFNVTTNCFEPAASL 269 (393)
Q Consensus 205 ~~~~~~~i~v~d~~~~~~-~-~~~~~----~~~v~~l~~~~~---~l~~~~------~dg~I~vwd~~~~~~~~~~~~~~ 269 (393)
..-.+..|+.|++..... . .+..| ..+|.....+++ .+++|- -.|.+.+|..+.. ..+.+
T Consensus 120 ~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----~sQ~i 194 (494)
T 1bpo_A 120 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----VSQPI 194 (494)
T ss_dssp EEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-----CEEEE
T ss_pred EEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-----ccchh
Confidence 778899999999975322 1 22222 356777777777 333332 2467788887763 45678
Q ss_pred cCceeeEEEEEEcCC-----EEEEecC---CCcEEEeeCCCc---ce------eeEec---cCccceEEEEEcC--CEEE
Q 016224 270 KGHSLAVVSLVVGAN-----KLYSGSM---DNSIRVWNLETL---QC------IQTLT---EHTSVVMSLLCWD--QFLL 327 (393)
Q Consensus 270 ~~~~~~v~~l~~~~~-----~l~sg~~---dg~i~iwd~~~~---~~------~~~~~---~~~~~v~~l~~~~--~~l~ 327 (393)
.+|...-..+..+++ .|..+.. .+.++|.++... .. +..+- ...+--.++..+. ..+.
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 889888777777654 3333332 378999988532 11 11111 1122335666663 4677
Q ss_pred EEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 328 SCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 328 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
.-..-|.|.+||+.++..+..-.-... .+..-+...... =++.-...|.|.--.+.
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrIs~~--~iF~t~~~~~~~---Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRISGE--TIFVTAPHEATA---GIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEETTTT---EEEEEETTCEEEEEEEC
T ss_pred EEecCceEEEEecccceeeeeecccCC--ceEEecccCCCC---cEEEEccCceEEEEEEc
Confidence 888999999999999887665543333 344333332222 24555577777655544
No 272
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.66 E-value=0.025 Score=59.43 Aligned_cols=256 Identities=15% Similarity=0.093 Sum_probs=143.9
Q ss_pred cCcEEEecCCCeEEEEECCCCc-EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEE----------EE
Q 016224 119 QGNCMYGEKCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCA----------GV 187 (393)
Q Consensus 119 ~~~~~~g~~dg~i~vwd~~~~~-~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~----------~~ 187 (393)
+++++..+ ++.++|..+++-. -.++++. -...+..++++|+.+.++.+..+. ..++....... ..
T Consensus 706 ~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 781 (1158)
T 3ei3_A 706 PDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRI--EVQDTSGGTTALRPSASTQALSS 781 (1158)
T ss_dssp TTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEE--EEECSSSSEEESSCCHHHHCSEE
T ss_pred CCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEec--cccccccccchhhhhhhhhhhhh
Confidence 34455444 5568888775321 2333443 246788999999888776655432 22222110000 00
Q ss_pred EecCCc-eEEE--E---eCCCEEEEEcCCeEEEEECCCCceee--ecCCCCcEEEEE---EeC---CEEEEEe-------
Q 016224 188 INLGGE-VGCM--I---SEGPWIFIGVTNFVKAWNTQTNTDLS--LSGPVGQVYAMA---VGN---DLLFAGT------- 246 (393)
Q Consensus 188 ~~~~~~-~~~~--~---~~~~~l~~~~~~~i~v~d~~~~~~~~--~~~~~~~v~~l~---~~~---~~l~~~~------- 246 (393)
...... .... . .-+.- -....|++.|..+.+.+. .......+.+++ |.. .+|++|+
T Consensus 782 ~~~~~~~~~~~~~~~~~~~g~~---~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e 858 (1158)
T 3ei3_A 782 SVSSSKLFSSSTAPHETSFGEE---VEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE 858 (1158)
T ss_dssp EECCCCCC----------CCCE---EEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTC
T ss_pred cccccccccccccCchhhcCCc---eeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCC
Confidence 000000 0000 0 00000 013467788877766551 122334445544 332 2888887
Q ss_pred ---CCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceee-EeccCcc-ceEEEEE
Q 016224 247 ---QDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQ-TLTEHTS-VVMSLLC 321 (393)
Q Consensus 247 ---~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~~~~-~v~~l~~ 321 (393)
..|.|++|++.... .+.+... ...+.+++++.-+.+|++|- ..+|++|++...+.+. ....... .+..+..
T Consensus 859 ~~~~~Gri~vf~v~~~k--L~lv~~~-~v~g~v~al~~~~g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~ 934 (1158)
T 3ei3_A 859 AEPKQGRIVVFQYSDGK--LQTVAEK-EVKGAVYSMVEFNGKLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKT 934 (1158)
T ss_dssp SSCCCEEEEEEEEETTE--EEEEEEE-EESSCEEEEEEETTEEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEE
T ss_pred CCCCceEEEEEEEECCE--EEEEEEE-EcCCcCEEEeeeCCEEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEec
Confidence 35889999997331 2333322 23567888876555665554 4789999998655433 1111111 1345666
Q ss_pred cCCEEEEEeCCCcEEEEEcCC-CcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 322 WDQFLLSCSLDKTIKVWFATD-SGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 322 ~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
.+++++.|..-..|.++..+. ...+..+........++++.+..+. .++.+..+|.|.+...+.
T Consensus 935 ~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~----t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD----NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT----EEEEEETTSEEEEEEECT
T ss_pred cCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC----cEEEEcCCCcEEEEecCC
Confidence 689999999888888766543 3455666666667778888888653 688899999999987654
No 273
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.59 E-value=0.013 Score=51.52 Aligned_cols=221 Identities=16% Similarity=0.203 Sum_probs=112.0
Q ss_pred CEEEEEeCC----CcEEEEECCCCeEEEEEecCCc---eEEEEeCCCEEEEE-cC-----CeEEEEECCCCceeeecC--
Q 016224 163 DKLYSGSKD----ETVRVWDCASGQCAGVINLGGE---VGCMISEGPWIFIG-VT-----NFVKAWNTQTNTDLSLSG-- 227 (393)
Q Consensus 163 ~~l~s~s~d----g~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~-~~-----~~i~v~d~~~~~~~~~~~-- 227 (393)
.+++.|+.+ ..+.+||+.+.+-...-..+.. ......++.+++.| .+ +.+.+||..+.+-..+..
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 96 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR 96 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC
Confidence 344445432 3678889887754333222211 12233456666554 22 368899998887553322
Q ss_pred -CCCcEEEEEEeCCEEEEEeCCC-----cEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCC-------Cc
Q 016224 228 -PVGQVYAMAVGNDLLFAGTQDG-----AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMD-------NS 294 (393)
Q Consensus 228 -~~~~v~~l~~~~~~l~~~~~dg-----~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d-------g~ 294 (393)
.......+.+...+++.|+.++ .+.+||+.+.. +..+..+........+...++.+++.|+.+ ..
T Consensus 97 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 174 (302)
T 2xn4_A 97 DRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE--WFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLST 174 (302)
T ss_dssp SCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCC
T ss_pred ccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCe--EeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccE
Confidence 1222233334444666676553 46677766542 222222222122223334566666666642 45
Q ss_pred EEEeeCCCccee--eEeccCccceEEEEEcCCEEEEEeCC-----CcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCC
Q 016224 295 IRVWNLETLQCI--QTLTEHTSVVMSLLCWDQFLLSCSLD-----KTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDS 367 (393)
Q Consensus 295 i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 367 (393)
+.+||+.+.+-. ..+.........+.+.+.+++.|+.+ ..+.+||+.+.. ...+........-..++..
T Consensus 175 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~r~~~~~~~~--- 250 (302)
T 2xn4_A 175 VECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA-WRQVADMNMCRRNAGVCAV--- 250 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE---
T ss_pred EEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC-EeeCCCCCCccccCeEEEE---
Confidence 889999875432 22222222234445557777777764 368899986543 3333222111111111111
Q ss_pred CCCcEEEEEeCCC-----eEEEEeCCce
Q 016224 368 EGKPVLLCSCNDN-----SVRFYDLPSV 390 (393)
Q Consensus 368 ~~~~~l~s~s~dg-----~I~iwd~~s~ 390 (393)
++.+++.|+.++ .|.+||+.+.
T Consensus 251 -~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 251 -NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp -TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred -CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 334777777553 4889998764
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.58 E-value=0.034 Score=49.03 Aligned_cols=215 Identities=9% Similarity=-0.013 Sum_probs=117.6
Q ss_pred eEEeeEecC-cEEEec-CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCC-C-cEEEEECCCCeEEEE
Q 016224 112 ILCRNWVQG-NCMYGE-KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-E-TVRVWDCASGQCAGV 187 (393)
Q Consensus 112 i~c~~~~~~-~~~~g~-~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d-g-~v~iwd~~~~~~~~~ 187 (393)
...++|.++ .++.+. ..+.|..||.... ....+. -......|++.++++++++.... + .|..+|..+++....
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~--~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCc--eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 456677655 444444 6789999997765 222222 23468899999999866655432 2 477778778876544
Q ss_pred EecCC--ceEE-EEeCCC-EEEEE-cCCeEEEEECCCCc--eeee---------cCCCCcEEEEEEeCC-EEEEEeCCCc
Q 016224 188 INLGG--EVGC-MISEGP-WIFIG-VTNFVKAWNTQTNT--DLSL---------SGPVGQVYAMAVGND-LLFAGTQDGA 250 (393)
Q Consensus 188 ~~~~~--~~~~-~~~~~~-~l~~~-~~~~i~v~d~~~~~--~~~~---------~~~~~~v~~l~~~~~-~l~~~~~dg~ 250 (393)
..... .... ....+. .+++. ..+.|.++|...+. .... .........+..+.. ++++-...+.
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~ 190 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKML 190 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTE
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCE
Confidence 43321 1111 112333 34444 46789999987642 2111 111224555644444 5555566789
Q ss_pred EEEEEeccCCccccCceeec-CceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceee--EeccCccceEEEEEcC----
Q 016224 251 ILAWKFNVTTNCFEPAASLK-GHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQ--TLTEHTSVVMSLLCWD---- 323 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~---- 323 (393)
|..+++..... ......+. .....-.++..+++++++....+.|.++|.. ++... .+.......+++++.+
T Consensus 191 I~~~~~~~~g~-~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d 268 (306)
T 2p4o_A 191 LLRIPVDSTDK-PGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGD 268 (306)
T ss_dssp EEEEEBCTTSC-BCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTT
T ss_pred EEEEEeCCCCC-CCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCC
Confidence 99999875211 11111111 0011112333356676666678899999975 55532 3333334578888852
Q ss_pred -CEEEEEeC
Q 016224 324 -QFLLSCSL 331 (393)
Q Consensus 324 -~~l~s~s~ 331 (393)
+.|+..+.
T Consensus 269 ~~~LyVt~~ 277 (306)
T 2p4o_A 269 CTAIYVVTN 277 (306)
T ss_dssp TTEEEEEEC
T ss_pred CCEEEEECC
Confidence 45554443
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.54 E-value=0.039 Score=48.66 Aligned_cols=219 Identities=11% Similarity=0.016 Sum_probs=121.4
Q ss_pred EEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEE--eCCCEEEEEcC--C-eEEEE
Q 016224 141 KLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMI--SEGPWIFIGVT--N-FVKAW 215 (393)
Q Consensus 141 ~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~--~-~i~v~ 215 (393)
+.+..+... .....++|+++++++++-..++.|..||... +....+........+. ++++++++... + .|..+
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 556666543 5677899999998777766789999999875 4444455444444443 46777666532 2 47777
Q ss_pred ECCCCceeeec--CCCCcEEEEEEeCC-EE-EEEeCCCcEEEEEeccCCcccc---C-ce--eecCceeeEEEEEEcCCE
Q 016224 216 NTQTNTDLSLS--GPVGQVYAMAVGND-LL-FAGTQDGAILAWKFNVTTNCFE---P-AA--SLKGHSLAVVSLVVGANK 285 (393)
Q Consensus 216 d~~~~~~~~~~--~~~~~v~~l~~~~~-~l-~~~~~dg~I~vwd~~~~~~~~~---~-~~--~~~~~~~~v~~l~~~~~~ 285 (393)
+..+++...+. ........++..++ .+ ++-..++.|+++|......... . .. .....-.....++.+++.
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ 180 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNF 180 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTE
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCE
Confidence 87777654322 12223344444443 44 4444588888888754210000 0 00 000111123344677765
Q ss_pred E-EEecCCCcEEEeeCCC-cce--eeEeccCccceEEEEEc--CCEEEEEeCCCcEEEEEcCCCcceEEEEeec-CCccE
Q 016224 286 L-YSGSMDNSIRVWNLET-LQC--IQTLTEHTSVVMSLLCW--DQFLLSCSLDKTIKVWFATDSGNLEVTYTHN-EEHGV 358 (393)
Q Consensus 286 l-~sg~~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~l~~~--~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~v 358 (393)
| ++-...+.|..||+.. ++. ...+... .....++++ ++++++....+.|.++|.. ++ +..+.... .....
T Consensus 181 lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~-~~~~~~~~~~~~~p 257 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS-TTIIAQAEQGVIGS 257 (306)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC-EEEEECGGGTCTTE
T ss_pred EEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC-EEEEeecccccCCc
Confidence 4 4555678999999874 322 1111111 122345555 6666666667899999874 33 22222222 22457
Q ss_pred EEEEee
Q 016224 359 LALCGM 364 (393)
Q Consensus 359 ~~~~~~ 364 (393)
.+++|.
T Consensus 258 ~~~a~~ 263 (306)
T 2p4o_A 258 TAVAFG 263 (306)
T ss_dssp EEEEEC
T ss_pred eEEEEe
Confidence 788886
No 276
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.51 E-value=0.012 Score=51.68 Aligned_cols=211 Identities=10% Similarity=0.137 Sum_probs=110.0
Q ss_pred CeEEEEECCCC-cEEEEEecCCcCCEEEEEecCCCCEEEEEeCC-----CcEEEEECCCCe---EEEEEecCC---ceEE
Q 016224 129 KFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-----ETVRVWDCASGQ---CAGVINLGG---EVGC 196 (393)
Q Consensus 129 g~i~vwd~~~~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d-----g~v~iwd~~~~~---~~~~~~~~~---~~~~ 196 (393)
..+.+||..+. ++.+..+......-..+. .++.+++.|+.+ ..+.+||..+.+ -...-..+. ....
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 36788888765 112222221111112222 246677777754 468999988766 333222221 1233
Q ss_pred EEeCCCEEEEE-c-----CCeEEEEECCCCceeeec---CCCCcEEEEEEeCCEEEEEeCC-----CcEEEEEeccCCcc
Q 016224 197 MISEGPWIFIG-V-----TNFVKAWNTQTNTDLSLS---GPVGQVYAMAVGNDLLFAGTQD-----GAILAWKFNVTTNC 262 (393)
Q Consensus 197 ~~~~~~~l~~~-~-----~~~i~v~d~~~~~~~~~~---~~~~~v~~l~~~~~~l~~~~~d-----g~I~vwd~~~~~~~ 262 (393)
...++.+++.| . .+.+.+||+.+.+-..+. ........+.+...+++.|+.+ ..+.+||+.+..
T Consensus 109 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-- 186 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH-- 186 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE--
T ss_pred EEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCc--
Confidence 33466666665 2 247899999887754322 1122222333333366666654 457888876643
Q ss_pred ccCceeecCceeeEEEEEEcCCEEEEecCC-----CcEEEeeCCCcceee--EeccCccceEEEEEcCCEEEEEeCC---
Q 016224 263 FEPAASLKGHSLAVVSLVVGANKLYSGSMD-----NSIRVWNLETLQCIQ--TLTEHTSVVMSLLCWDQFLLSCSLD--- 332 (393)
Q Consensus 263 ~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~l~s~s~d--- 332 (393)
+..+..+.........+..++.+++.|+.+ ..+.+||+.+.+-.. .+.........+...+++++.|+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 266 (301)
T 2vpj_A 187 WTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNS 266 (301)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred EEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCc
Confidence 222222221122223344566677777754 468999998754322 2222222234444557777777765
Q ss_pred --CcEEEEEcCCC
Q 016224 333 --KTIKVWFATDS 343 (393)
Q Consensus 333 --g~i~iwd~~~~ 343 (393)
..|.+||+.+.
T Consensus 267 ~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 267 LLSSIECYDPIID 279 (301)
T ss_dssp BEEEEEEEETTTT
T ss_pred ccccEEEEcCCCC
Confidence 35778887654
No 277
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.50 E-value=0.02 Score=50.36 Aligned_cols=210 Identities=14% Similarity=0.149 Sum_probs=108.5
Q ss_pred CeEEEEECCCCcEEEE--EecCCcCCEEEEEecCCCCEEEEEeCC-----CcEEEEECCCCeEEEEEecCC---ceEEEE
Q 016224 129 KFLHSWTVGDGFKLLT--QLEGHQKVVSGITLPSGSDKLYSGSKD-----ETVRVWDCASGQCAGVINLGG---EVGCMI 198 (393)
Q Consensus 129 g~i~vwd~~~~~~~~~--~l~~h~~~I~~i~~s~~~~~l~s~s~d-----g~v~iwd~~~~~~~~~~~~~~---~~~~~~ 198 (393)
..+.+||..+. +-.. .+......-..+.+ ++.+++.|+.+ ..+.+||..+.+-...-..+. ......
T Consensus 30 ~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEE-RWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV 106 (302)
T ss_dssp CCEEEEETTTT-EEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred CcEEEEcCcCC-cEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE
Confidence 35788888766 3221 12211111111222 56667777654 368899998876443332222 123333
Q ss_pred eCCCEEEEE-cC-----CeEEEEECCCCceeeecC---CCCcEEEEEEeCCEEEEEeCC-------CcEEEEEeccCCcc
Q 016224 199 SEGPWIFIG-VT-----NFVKAWNTQTNTDLSLSG---PVGQVYAMAVGNDLLFAGTQD-------GAILAWKFNVTTNC 262 (393)
Q Consensus 199 ~~~~~l~~~-~~-----~~i~v~d~~~~~~~~~~~---~~~~v~~l~~~~~~l~~~~~d-------g~I~vwd~~~~~~~ 262 (393)
.++.+++.| .+ +.+.+||+.+.+-..+.. .......+.+...+++.|+.+ ..+.+||+.+..
T Consensus 107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-- 184 (302)
T 2xn4_A 107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE-- 184 (302)
T ss_dssp ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTE--
T ss_pred ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCc--
Confidence 456665554 33 267889998877553322 112222333333366666542 347888876542
Q ss_pred ccCceeecCceeeEEEEEEcCCEEEEecCC-----CcEEEeeCCCccee--eEeccCccceEEEEEcCCEEEEEeCCC--
Q 016224 263 FEPAASLKGHSLAVVSLVVGANKLYSGSMD-----NSIRVWNLETLQCI--QTLTEHTSVVMSLLCWDQFLLSCSLDK-- 333 (393)
Q Consensus 263 ~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~l~s~s~dg-- 333 (393)
+..+..+.........+..++.+++.|+.+ ..+.+||+.+.+-. ..+.........+...+.+++.|+.++
T Consensus 185 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~ 264 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSC 264 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred EEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCc
Confidence 222222221112223344566677777754 46899999875432 222212222234445577777777653
Q ss_pred ---cEEEEEcCCC
Q 016224 334 ---TIKVWFATDS 343 (393)
Q Consensus 334 ---~i~iwd~~~~ 343 (393)
.+.+||+.+.
T Consensus 265 ~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 265 NLASVEYYNPTTD 277 (302)
T ss_dssp BCCCEEEEETTTT
T ss_pred ccccEEEEcCCCC
Confidence 4888888654
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.49 E-value=0.11 Score=52.37 Aligned_cols=223 Identities=11% Similarity=0.043 Sum_probs=124.9
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE-eCCCcEEEEECCCC----eEEEEEe--cCCce
Q 016224 122 CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG-SKDETVRVWDCASG----QCAGVIN--LGGEV 194 (393)
Q Consensus 122 ~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd~~~~----~~~~~~~--~~~~~ 194 (393)
.++-+....|+..++... .....+ .....+..|+|++....|+.+ ...+.|+.+++... .....+. ...+.
T Consensus 397 ~Ll~an~~~Ir~i~l~~~-~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRS-EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEECBSSEEEECTTSC-CCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccccccceeEeeccCC-cceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 344444556777777654 333233 345677899999865555544 45678888988753 2222232 11222
Q ss_pred -EEEEeCCCEEEEE--cCCeEEEEECCCCceeee-cCCCCcEEEEEEeCC--EEEEEeC--CCcEEEEEeccCCccccCc
Q 016224 195 -GCMISEGPWIFIG--VTNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND--LLFAGTQ--DGAILAWKFNVTTNCFEPA 266 (393)
Q Consensus 195 -~~~~~~~~~l~~~--~~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~--~l~~~~~--dg~I~vwd~~~~~~~~~~~ 266 (393)
..+...+..|+.. ..+.|.+.++.......+ .........|++++. .|+.... .+.|.+.++..... .
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~----~ 550 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----Y 550 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE----E
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce----E
Confidence 2333345445543 456999999987665433 344556889999875 5554442 36788887765421 1
Q ss_pred eeecCceeeEEEEEEc--CCEEEEe-cCCCcEEEeeCCCcceeeEecc--CccceEEEEEcCCEEEEE-eCCCcEEEEEc
Q 016224 267 ASLKGHSLAVVSLVVG--ANKLYSG-SMDNSIRVWNLETLQCIQTLTE--HTSVVMSLLCWDQFLLSC-SLDKTIKVWFA 340 (393)
Q Consensus 267 ~~~~~~~~~v~~l~~~--~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~~l~s~-s~dg~i~iwd~ 340 (393)
..+...-.....|+++ ...|+.+ .....|..+|+........+.. .-....+|++.+++|+.. ...+.|...|.
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeC
Confidence 1122222344566665 4555544 4567899999865433333322 122345677776655544 45678888887
Q ss_pred CCCcceEEEE
Q 016224 341 TDSGNLEVTY 350 (393)
Q Consensus 341 ~~~~~~~~~~ 350 (393)
.+++.+..+.
T Consensus 631 ~tG~~~~~l~ 640 (791)
T 3m0c_C 631 LTGSDVNLLA 640 (791)
T ss_dssp TTCCCCEEEE
T ss_pred CCCcceEEee
Confidence 6666555543
No 279
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.48 E-value=0.05 Score=48.17 Aligned_cols=216 Identities=8% Similarity=0.029 Sum_probs=112.8
Q ss_pred EecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeC----C-------CcEEEEECCCCeEEEEEecCC
Q 016224 124 YGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSK----D-------ETVRVWDCASGQCAGVINLGG 192 (393)
Q Consensus 124 ~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~----d-------g~v~iwd~~~~~~~~~~~~~~ 192 (393)
+|+ ..+.+||..++.=....+..........+...++.+++.|+. + ..+.+||..+.+-...-..+.
T Consensus 10 ~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 87 (315)
T 4asc_A 10 ISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS 87 (315)
T ss_dssp EET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS
T ss_pred EcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc
Confidence 455 678999998772122333322122222223346778888873 1 127788988876433222222
Q ss_pred c---eEEEEeCCCEEEEEc----C-----CeEEEEECCCCceeeecC---CCCcEEEEEEeCCEEEEEeC-C-----CcE
Q 016224 193 E---VGCMISEGPWIFIGV----T-----NFVKAWNTQTNTDLSLSG---PVGQVYAMAVGNDLLFAGTQ-D-----GAI 251 (393)
Q Consensus 193 ~---~~~~~~~~~~l~~~~----~-----~~i~v~d~~~~~~~~~~~---~~~~v~~l~~~~~~l~~~~~-d-----g~I 251 (393)
. ......++.+++.|. + +.+.+||+.+++-..+.. .......+.+...+++.|+. + ..+
T Consensus 88 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 167 (315)
T 4asc_A 88 PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKM 167 (315)
T ss_dssp CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCE
T ss_pred chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceE
Confidence 1 122334566655542 1 368999998876543322 11222233333346666665 2 458
Q ss_pred EEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCC-----cEEEeeCCCcceee--EeccCccceEEEEEcCC
Q 016224 252 LAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDN-----SIRVWNLETLQCIQ--TLTEHTSVVMSLLCWDQ 324 (393)
Q Consensus 252 ~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~ 324 (393)
.+||+.+.. +..+..+......-.+...++.+++.|+.++ .+.+||+.+.+-.. .+.........+.+.+.
T Consensus 168 ~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 245 (315)
T 4asc_A 168 CVYDPKKFE--WKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGT 245 (315)
T ss_dssp EEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred EEEeCCCCe--EEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCE
Confidence 888877642 2222222221222233445667777777654 58889998754322 22222222344455677
Q ss_pred EEEEEeCCC--------------cEEEEEcCCC
Q 016224 325 FLLSCSLDK--------------TIKVWFATDS 343 (393)
Q Consensus 325 ~l~s~s~dg--------------~i~iwd~~~~ 343 (393)
+++.|+.++ .+.+||+.+.
T Consensus 246 l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 246 LYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 777777532 3667777654
No 280
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.48 E-value=0.021 Score=50.12 Aligned_cols=222 Identities=13% Similarity=0.127 Sum_probs=113.8
Q ss_pred CCEEEEEe-CC-----CcEEEEECCCCeEEEEEecCC---ceEEEEeCCCEEEEE-cC-----CeEEEEECCCCc---ee
Q 016224 162 SDKLYSGS-KD-----ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIG-VT-----NFVKAWNTQTNT---DL 223 (393)
Q Consensus 162 ~~~l~s~s-~d-----g~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-~~-----~~i~v~d~~~~~---~~ 223 (393)
+.+++.|+ .+ ..+.+||..+.+-...-..+. .......++.+++.| .+ +.+.+||+.+++ -.
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWY 94 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCE
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeE
Confidence 34555555 22 378889988775433222221 123334456666554 22 478999998877 33
Q ss_pred eecC---CCCcEEEEEEeCCEEEEEeCC-----CcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCC---
Q 016224 224 SLSG---PVGQVYAMAVGNDLLFAGTQD-----GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMD--- 292 (393)
Q Consensus 224 ~~~~---~~~~v~~l~~~~~~l~~~~~d-----g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d--- 292 (393)
.+.. .......+.+...+++.|+.+ ..+.+||+.+.. +..+..+......-.++..++.+++.|+.+
T Consensus 95 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 172 (301)
T 2vpj_A 95 SVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQ--WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLN 172 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE--EEEEEECSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred ECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCe--EEECCCCCCCcccceEEEECCEEEEECCCCCCc
Confidence 2221 122223333333366666644 357788876543 222222222122223334466667777654
Q ss_pred --CcEEEeeCCCcceee--EeccCccceEEEEEcCCEEEEEeCC-----CcEEEEEcCCCcceEEEEeecCCccEEEEEe
Q 016224 293 --NSIRVWNLETLQCIQ--TLTEHTSVVMSLLCWDQFLLSCSLD-----KTIKVWFATDSGNLEVTYTHNEEHGVLALCG 363 (393)
Q Consensus 293 --g~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 363 (393)
..+.+||+.+.+-.. .+.........+.+.+.+++.|+.+ ..+.+||+.+.. ...+........-.+++.
T Consensus 173 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~ 251 (301)
T 2vpj_A 173 ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS-WTTVTSMTTPRCYVGATV 251 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEE
T ss_pred ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc-EEECCCCCCcccceeEEE
Confidence 468899988754322 2222222234444556777777764 468999987543 233222111111111111
Q ss_pred eeCCCCCcEEEEEeCC-----CeEEEEeCCce
Q 016224 364 MPDSEGKPVLLCSCND-----NSVRFYDLPSV 390 (393)
Q Consensus 364 ~~~~~~~~~l~s~s~d-----g~I~iwd~~s~ 390 (393)
. ++++++.|+.+ ..|.+||+.+.
T Consensus 252 ~----~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 252 L----RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp E----TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred E----CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 1 33367777655 46788888764
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.47 E-value=0.052 Score=48.33 Aligned_cols=219 Identities=12% Similarity=0.044 Sum_probs=123.4
Q ss_pred CCCeEEEEECCCCc-EEEEEecCCcCCEEEEEecCCCCEEE-EEeCCCcEEEEECCCCeE---EEEEecCCce-EEEEeC
Q 016224 127 KCKFLHSWTVGDGF-KLLTQLEGHQKVVSGITLPSGSDKLY-SGSKDETVRVWDCASGQC---AGVINLGGEV-GCMISE 200 (393)
Q Consensus 127 ~dg~i~vwd~~~~~-~~~~~l~~h~~~I~~i~~s~~~~~l~-s~s~dg~v~iwd~~~~~~---~~~~~~~~~~-~~~~~~ 200 (393)
....|+..+++... .....+. ....+.+|+|++.+..|+ +-...+.|..+++..+.. +.......+. ..+...
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred ccCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 35678888887642 1111122 223567899988655555 445567899999876532 1111222222 223333
Q ss_pred CCEE-EEE-cCCeEEEEECCCCceee-ecCCCCcEEEEEEeCC--EEEEEe--CCCcEEEEEeccCCccccCceeecCce
Q 016224 201 GPWI-FIG-VTNFVKAWNTQTNTDLS-LSGPVGQVYAMAVGND--LLFAGT--QDGAILAWKFNVTTNCFEPAASLKGHS 273 (393)
Q Consensus 201 ~~~l-~~~-~~~~i~v~d~~~~~~~~-~~~~~~~v~~l~~~~~--~l~~~~--~dg~I~vwd~~~~~~~~~~~~~~~~~~ 273 (393)
+..| ++. ..+.|.++++....... ..........+++++. .|+... ..+.|...++..... .......-
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~----~~~~~~~l 165 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR----FIIINSEI 165 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC----EEEECSSC
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe----EEEEECCC
Confidence 4444 444 45689999987654433 3345567789999874 555544 357788887764321 11111112
Q ss_pred eeEEEEEEc--CCEEE-EecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCC-EEEEEeCCCcEEEEEcCCCcceEEE
Q 016224 274 LAVVSLVVG--ANKLY-SGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQ-FLLSCSLDKTIKVWFATDSGNLEVT 349 (393)
Q Consensus 274 ~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~-~l~s~s~dg~i~iwd~~~~~~~~~~ 349 (393)
..-..|+++ ++.|+ +=+..+.|..+|+........+......-..+++.++ ++++-...+.|..++..+++....+
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 233556665 45544 4456788999998643322222223334466666654 4555556788999998777655554
Q ss_pred E
Q 016224 350 Y 350 (393)
Q Consensus 350 ~ 350 (393)
.
T Consensus 246 ~ 246 (318)
T 3sov_A 246 H 246 (318)
T ss_dssp E
T ss_pred e
Confidence 4
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.47 E-value=0.054 Score=48.49 Aligned_cols=187 Identities=14% Similarity=0.200 Sum_probs=114.7
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEecCCce-EEEEe----CCC---EEEEE--c--CCeEEEEEC--CCCceeeec
Q 016224 161 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEV-GCMIS----EGP---WIFIG--V--TNFVKAWNT--QTNTDLSLS 226 (393)
Q Consensus 161 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~----~~~---~l~~~--~--~~~i~v~d~--~~~~~~~~~ 226 (393)
...+++.....+-+.+||+ +|+.++.+.....- ..+.+ .++ +++++ . +++|.+|++ .+++...+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 3456777777889999999 88888888653211 11222 222 34444 3 579999966 444433331
Q ss_pred C------C-CCcEEEEEE--eCC----EEEEEeCCCcEEEEEeccC---CccccCceeecCceeeEEEEEEc--CCEEEE
Q 016224 227 G------P-VGQVYAMAV--GND----LLFAGTQDGAILAWKFNVT---TNCFEPAASLKGHSLAVVSLVVG--ANKLYS 288 (393)
Q Consensus 227 ~------~-~~~v~~l~~--~~~----~l~~~~~dg~I~vwd~~~~---~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s 288 (393)
. . ...+..+++ ++. ++++...+|.+..|++... ....+.+..+.-. ..+-.+..+ ..+|+.
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYI 196 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEE
Confidence 1 1 156667777 553 6888899999999998542 1222444554432 344555555 468999
Q ss_pred ecCCCcEEEeeCC-----CcceeeEec-cC-ccceEEEEEc----CC-EEEEEe-CCCcEEEEEcC-CCcceEEE
Q 016224 289 GSMDNSIRVWNLE-----TLQCIQTLT-EH-TSVVMSLLCW----DQ-FLLSCS-LDKTIKVWFAT-DSGNLEVT 349 (393)
Q Consensus 289 g~~dg~i~iwd~~-----~~~~~~~~~-~~-~~~v~~l~~~----~~-~l~s~s-~dg~i~iwd~~-~~~~~~~~ 349 (393)
+-++.-|..+|.+ +++.+..+. ++ ...+..|+.. ++ +|++++ .+.+..+||.. +.+.+..+
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 9998777777755 355665553 22 2356666663 23 666666 57799999996 44444444
No 283
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.45 E-value=0.033 Score=49.90 Aligned_cols=182 Identities=13% Similarity=0.137 Sum_probs=103.0
Q ss_pred EEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCCE--------EEE-Ee-C--CCcEEEEEeccCCccccCcee---
Q 016224 204 IFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDL--------LFA-GT-Q--DGAILAWKFNVTTNCFEPAAS--- 268 (393)
Q Consensus 204 l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~~--------l~~-~~-~--dg~I~vwd~~~~~~~~~~~~~--- 268 (393)
|.+...+.+.+||+ .++.+..... +.+..+..-+++ ++. .. . +++|.+|++.........+..
T Consensus 44 i~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~ 121 (355)
T 3amr_A 44 ITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDH 121 (355)
T ss_dssp EEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTS
T ss_pred EEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccccc
Confidence 33446679999999 6666533322 567776665542 333 33 3 578999988533221111111
Q ss_pred -ecCceeeEEEEEE--c---CC-EEEEecCCCcEEEeeCC-------CcceeeEeccCccceEEEEEc--CCEEEEEeCC
Q 016224 269 -LKGHSLAVVSLVV--G---AN-KLYSGSMDNSIRVWNLE-------TLQCIQTLTEHTSVVMSLLCW--DQFLLSCSLD 332 (393)
Q Consensus 269 -~~~~~~~v~~l~~--~---~~-~l~sg~~dg~i~iwd~~-------~~~~~~~~~~~~~~v~~l~~~--~~~l~s~s~d 332 (393)
+......+..++. + +. ++++...+|.+..|++. +.+.+++|... +.+-.+..+ ...|+.+-++
T Consensus 122 pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 122 PIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp CEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETT
T ss_pred CcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEEeccc
Confidence 0000023333443 3 33 68888889999999882 44667777654 355566666 5689999998
Q ss_pred CcEEEEEcCCCc--ceEEEE--eec-CCccEEEEEeeeCCCCCcEEEEEe-CCCeEEEEeCC
Q 016224 333 KTIKVWFATDSG--NLEVTY--THN-EEHGVLALCGMPDSEGKPVLLCSC-NDNSVRFYDLP 388 (393)
Q Consensus 333 g~i~iwd~~~~~--~~~~~~--~~~-~~~~v~~~~~~~~~~~~~~l~s~s-~dg~I~iwd~~ 388 (393)
..|..++.+... ....+. ... -...+-.++.-+...+..+|++++ .++++.+||..
T Consensus 201 ~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 201 EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 766666644221 111221 111 112366666654433333566555 57899999986
No 284
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.45 E-value=0.034 Score=48.97 Aligned_cols=220 Identities=10% Similarity=0.072 Sum_probs=113.3
Q ss_pred EEEEEeC--CCcEEEEECCCCeEEEEEecCC---ceEEEEeCCCEEEEE-cC----CeEEEEECCCCceeeecC---CCC
Q 016224 164 KLYSGSK--DETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIG-VT----NFVKAWNTQTNTDLSLSG---PVG 230 (393)
Q Consensus 164 ~l~s~s~--dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-~~----~~i~v~d~~~~~~~~~~~---~~~ 230 (393)
+++.|+. ...+.+||..+.+-...-..+. .......++.+++.| .+ +.+.+||+.+++-..+.. ...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 4455554 3578899998876443222221 123333466665554 32 578899999887543322 122
Q ss_pred cEEEEEEeCCEEEEEeCC------CcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecC---------CCcE
Q 016224 231 QVYAMAVGNDLLFAGTQD------GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSM---------DNSI 295 (393)
Q Consensus 231 ~v~~l~~~~~~l~~~~~d------g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~---------dg~i 295 (393)
....+.+...+++.|+.+ ..+.+||+.+.. +..+..+......-..+..++.+++.|+. -..+
T Consensus 94 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 94 SLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES--WHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp SCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCE
T ss_pred ceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--eEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceE
Confidence 223333433466677655 458888877643 12222221111112233456666666653 3458
Q ss_pred EEeeCCCccee--eEeccCccceEEEEEcCCEEEEEeCC-----CcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCC
Q 016224 296 RVWNLETLQCI--QTLTEHTSVVMSLLCWDQFLLSCSLD-----KTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSE 368 (393)
Q Consensus 296 ~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 368 (393)
.+||+.+.+-. ..+......-..+...+.+++.|+.+ ..+.+||+.+.. ...+........-..++..
T Consensus 172 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~---- 246 (306)
T 3ii7_A 172 EVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSPMPWKGVTVKCAAV---- 246 (306)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE-EEECCCCSCCBSCCEEEEE----
T ss_pred EEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc-EEECCCCCCCccceeEEEE----
Confidence 89999876432 22222222223444456677777654 358889986543 2222211111111111111
Q ss_pred CCcEEEEEeCC-----CeEEEEeCCce
Q 016224 369 GKPVLLCSCND-----NSVRFYDLPSV 390 (393)
Q Consensus 369 ~~~~l~s~s~d-----g~I~iwd~~s~ 390 (393)
++.+++.|+.+ ..|.+||+.+.
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 33477777744 56888998764
No 285
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.43 E-value=0.07 Score=48.89 Aligned_cols=211 Identities=9% Similarity=-0.056 Sum_probs=116.9
Q ss_pred CCcEEEEECCCCeEEEEEecCCceEEEE--eCCCEEE-EE-cCCeEEEEECCCCceeee-cCCCCcEEEEEEeCC---EE
Q 016224 171 DETVRVWDCASGQCAGVINLGGEVGCMI--SEGPWIF-IG-VTNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND---LL 242 (393)
Q Consensus 171 dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~l~-~~-~~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~---~l 242 (393)
...|+..++.................+. .....|+ +. ..+.|..+++.......+ .........+++++. ++
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY 174 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 174 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEE
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEE
Confidence 3578888887766555554444444333 3344444 44 456899999887654432 222334566777753 55
Q ss_pred EEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEE-EecCC-CcEEEeeCCCcceeeEeccCccceEE
Q 016224 243 FAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLY-SGSMD-NSIRVWNLETLQCIQTLTEHTSVVMS 318 (393)
Q Consensus 243 ~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~-sg~~d-g~i~iwd~~~~~~~~~~~~~~~~v~~ 318 (393)
++-...+.|.+.++.... ....+.........++++ +..|+ +-... +.|..+++............-..-..
T Consensus 175 ~~d~~~~~I~~~~~dg~~----~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnG 250 (386)
T 3v65_B 175 WTDSGTSRIEVANLDGAH----RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNG 250 (386)
T ss_dssp EEETTTTEEEECBTTSCS----CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred EEcCCCCeEEEEeCCCCc----eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeee
Confidence 555667788888776432 111122222334566665 44444 44344 78888887643332222223334577
Q ss_pred EEEc--CCEE-EEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 319 LLCW--DQFL-LSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 319 l~~~--~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
|+++ +..| ++-+..+.|..+|+..... ..+.... ......++. . ++.++++-...+.|..++..+++
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~-~~~P~giav-~---~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG-LPHPFAITV-F---EDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSS-CSSEEEEEE-E---TTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECC-CCCceEEEE-E---CCEEEEeeCCCCeEEEEECCCCc
Confidence 8886 4444 4445567899999864332 3332211 223455555 2 22366666677888888865553
No 286
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.43 E-value=0.024 Score=50.05 Aligned_cols=223 Identities=12% Similarity=0.124 Sum_probs=113.1
Q ss_pred CCCEEEEEeCC----CcEEEEECCCCeEEEEEecCC---ceEEEEeCCCEEEEE-c----C-----CeEEEEECCCCcee
Q 016224 161 GSDKLYSGSKD----ETVRVWDCASGQCAGVINLGG---EVGCMISEGPWIFIG-V----T-----NFVKAWNTQTNTDL 223 (393)
Q Consensus 161 ~~~~l~s~s~d----g~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-~----~-----~~i~v~d~~~~~~~ 223 (393)
++.+++.|+.+ ..+.+||..+.+-...-..+. .......++.+++.| . + +.+.+||+.+.+-.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 45566666532 368888988776443322221 112233455555554 2 2 46889999887754
Q ss_pred eecC---CCCcEEEEEEeCCEEEEEeCC-----CcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCC---
Q 016224 224 SLSG---PVGQVYAMAVGNDLLFAGTQD-----GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMD--- 292 (393)
Q Consensus 224 ~~~~---~~~~v~~l~~~~~~l~~~~~d-----g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d--- 292 (393)
.+.. .......+.+...+++.|+.+ ..+.+||+.+.. ++.+..+......-.++..++.+++.|+.+
T Consensus 104 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 181 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE--WHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN 181 (308)
T ss_dssp ECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred ECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCe--EeECCCCCccccceEEEEECCEEEEEeCCCCCC
Confidence 3322 122223333433366666543 357788876543 122222221111222334466667777654
Q ss_pred --CcEEEeeCCCccee--eEeccCccceEEEEEcCCEEEEEeCC-----CcEEEEEcCCCcceEEEEeecCCccEEEEEe
Q 016224 293 --NSIRVWNLETLQCI--QTLTEHTSVVMSLLCWDQFLLSCSLD-----KTIKVWFATDSGNLEVTYTHNEEHGVLALCG 363 (393)
Q Consensus 293 --g~i~iwd~~~~~~~--~~~~~~~~~v~~l~~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 363 (393)
..+.+||+.+.+-. ..+.........+.+.+.+++.|+.+ ..+.+||+.+.. ...+........-.+++.
T Consensus 182 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~ 260 (308)
T 1zgk_A 182 RLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET-WTFVAPMKHRRSALGITV 260 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEE
T ss_pred cCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc-EEECCCCCCCccceEEEE
Confidence 46889998765432 22222222234444556777777664 568999987543 222221111111111111
Q ss_pred eeCCCCCcEEEEEeCC-----CeEEEEeCCce
Q 016224 364 MPDSEGKPVLLCSCND-----NSVRFYDLPSV 390 (393)
Q Consensus 364 ~~~~~~~~~l~s~s~d-----g~I~iwd~~s~ 390 (393)
. ++++++.|+.+ ..|.+||+.+.
T Consensus 261 ~----~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 261 H----QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp E----TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred E----CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 1 33477777643 45788888764
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.42 E-value=0.075 Score=48.96 Aligned_cols=223 Identities=10% Similarity=0.046 Sum_probs=127.0
Q ss_pred EEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe-CCCcEEEEECCCC----eEEEEEe-cCCceE
Q 016224 122 CMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVRVWDCASG----QCAGVIN-LGGEVG 195 (393)
Q Consensus 122 ~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~~~----~~~~~~~-~~~~~~ 195 (393)
.++-+....|+..++... .....+ .....+..|+|++.+..|+-+. ..+.|..+++... .....+. ......
T Consensus 85 ~ll~~~~~~I~~i~l~~~-~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRS-EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEETTEEEEECTTSC-SCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEeccceeEEEccCCc-ceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 344444577888888765 333233 3456788999998766666554 4678888988652 2222232 112222
Q ss_pred EE--EeCCCEEE-EE-cCCeEEEEECCCCceee-ecCCCCcEEEEEEeCC--EEEEEe--CCCcEEEEEeccCCccccCc
Q 016224 196 CM--ISEGPWIF-IG-VTNFVKAWNTQTNTDLS-LSGPVGQVYAMAVGND--LLFAGT--QDGAILAWKFNVTTNCFEPA 266 (393)
Q Consensus 196 ~~--~~~~~~l~-~~-~~~~i~v~d~~~~~~~~-~~~~~~~v~~l~~~~~--~l~~~~--~dg~I~vwd~~~~~~~~~~~ 266 (393)
.+ ...+..|+ +. ..+.|.+.++....... +.........|+++|. .|+... ..+.|...++..... .
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~----~ 238 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----Y 238 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC----E
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc----E
Confidence 22 23244444 44 45689999988765543 3334556889999874 444443 246788888765321 1
Q ss_pred eeecCceeeEEEEEEc--CCEEEEe-cCCCcEEEeeCCCcceeeEecc--CccceEEEEEcCC-EEEEEeCCCcEEEEEc
Q 016224 267 ASLKGHSLAVVSLVVG--ANKLYSG-SMDNSIRVWNLETLQCIQTLTE--HTSVVMSLLCWDQ-FLLSCSLDKTIKVWFA 340 (393)
Q Consensus 267 ~~~~~~~~~v~~l~~~--~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~l~~~~~-~l~s~s~dg~i~iwd~ 340 (393)
......-.....|+++ +..|+.+ ...+.|..+|+........+.. ....-..+++.++ ++++-...+.|..+|.
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEES
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEc
Confidence 1112222334566665 4555544 4567899999865333222221 2233456666655 5556666788999997
Q ss_pred CCCcceEEEE
Q 016224 341 TDSGNLEVTY 350 (393)
Q Consensus 341 ~~~~~~~~~~ 350 (393)
.+++....+.
T Consensus 319 ~~G~~~~~i~ 328 (400)
T 3p5b_L 319 LTGSDVNLLA 328 (400)
T ss_dssp SSCCCCEEEE
T ss_pred CCCCceEEEe
Confidence 6776655544
No 288
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.41 E-value=0.049 Score=46.66 Aligned_cols=192 Identities=13% Similarity=0.093 Sum_probs=117.3
Q ss_pred EEecCCcCCEEEEEecCCCCEEEE-EeCCCcEEEEECCCCeEEEEEecC--CceEEE--EeCCCEEEEE-cCCeEEEEEC
Q 016224 144 TQLEGHQKVVSGITLPSGSDKLYS-GSKDETVRVWDCASGQCAGVINLG--GEVGCM--ISEGPWIFIG-VTNFVKAWNT 217 (393)
Q Consensus 144 ~~l~~h~~~I~~i~~s~~~~~l~s-~s~dg~v~iwd~~~~~~~~~~~~~--~~~~~~--~~~~~~l~~~-~~~~i~v~d~ 217 (393)
+.+.+-...+..|+++|+++.|++ ...++.|...|.. ++.++.+... .....+ ..++.++++. .++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 356666678999999998766654 7778999999998 8888888654 233333 3456555555 4568888887
Q ss_pred CCCce---e-ee------cCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceeec-------CceeeEEE
Q 016224 218 QTNTD---L-SL------SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASLK-------GHSLAVVS 278 (393)
Q Consensus 218 ~~~~~---~-~~------~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~-------~~~~~v~~ 278 (393)
..... . .. .........|++++. .|+++.+.....+|.+..... ...+..+. .+.....+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~-~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS-SNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC-SSCCEEEECHHHHHTCCSSCCCE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc-CCceeeecchhhccccccCCcee
Confidence 65442 1 11 122344689999987 666666666666666652100 00111110 11223466
Q ss_pred EEEc---CCEEEEecCCCcEEEeeCCCcceeeEeccCc---------cceEEEEEc--CCEEEEEeCCCcEEEEE
Q 016224 279 LVVG---ANKLYSGSMDNSIRVWNLETLQCIQTLTEHT---------SVVMSLLCW--DQFLLSCSLDKTIKVWF 339 (393)
Q Consensus 279 l~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~l~~~--~~~l~s~s~dg~i~iwd 339 (393)
++++ +++++.......|.++|.. ++.+..+.-.. ..--.|+++ |+ |+..++-+.++.+.
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT 250 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence 7776 3467777788899999976 55655554221 244677787 44 44456666666554
No 289
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.39 E-value=0.061 Score=47.28 Aligned_cols=212 Identities=6% Similarity=0.035 Sum_probs=112.5
Q ss_pred CCeEEEEECCCC-cEEEEEecCCcCCEEEEEecCCCCEEEEEeCC----CcEEEEECCCCeEEEEEecCCc---eEEEEe
Q 016224 128 CKFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD----ETVRVWDCASGQCAGVINLGGE---VGCMIS 199 (393)
Q Consensus 128 dg~i~vwd~~~~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d----g~v~iwd~~~~~~~~~~~~~~~---~~~~~~ 199 (393)
...+.+||..+. ++.+..+......-..+.+ ++.+++.|+.+ ..+.+||..+.+-...-..+.. ......
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 457889998876 1222222221122222222 55667777754 6788999988765444333221 233334
Q ss_pred CCCEEEEE-cC------CeEEEEECCCCceeeecC---CCCcEEEEEEeCCEEEEEeC---------CCcEEEEEeccCC
Q 016224 200 EGPWIFIG-VT------NFVKAWNTQTNTDLSLSG---PVGQVYAMAVGNDLLFAGTQ---------DGAILAWKFNVTT 260 (393)
Q Consensus 200 ~~~~l~~~-~~------~~i~v~d~~~~~~~~~~~---~~~~v~~l~~~~~~l~~~~~---------dg~I~vwd~~~~~ 260 (393)
++.+++.| .+ ..+.+||+.+.+-..+.. .......+.+...+++.|+. -..+.+||+.+..
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 66666654 33 368999999887543322 11222233333335555553 3457888877653
Q ss_pred ccccCceeecCceeeEEEEEEcCCEEEEecCC-----CcEEEeeCCCcce--eeEeccCccceEEEEEcCCEEEEEeCC-
Q 016224 261 NCFEPAASLKGHSLAVVSLVVGANKLYSGSMD-----NSIRVWNLETLQC--IQTLTEHTSVVMSLLCWDQFLLSCSLD- 332 (393)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d-----g~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~l~s~s~d- 332 (393)
+..+..+......-..+..++.+++.|+.+ ..+.+||+.+.+- +..+........++...+.+++.|+.+
T Consensus 181 --W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 258 (306)
T 3ii7_A 181 --WTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQG 258 (306)
T ss_dssp --EEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCS
T ss_pred --EEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCC
Confidence 222222221112223334466667777653 4688999987542 222222222334455567777788754
Q ss_pred ----CcEEEEEcCCC
Q 016224 333 ----KTIKVWFATDS 343 (393)
Q Consensus 333 ----g~i~iwd~~~~ 343 (393)
..+.+||+.+.
T Consensus 259 ~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 259 VGRLGHILEYNTETD 273 (306)
T ss_dssp SSBCCEEEEEETTTT
T ss_pred CeeeeeEEEEcCCCC
Confidence 45888888654
No 290
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.34 E-value=0.046 Score=48.37 Aligned_cols=175 Identities=12% Similarity=0.153 Sum_probs=93.1
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEecCC-----ceEEEEeCCCEEEEEc-----CC-------eEEEEECCCCceeeec
Q 016224 164 KLYSGSKDETVRVWDCASGQCAGVINLGG-----EVGCMISEGPWIFIGV-----TN-------FVKAWNTQTNTDLSLS 226 (393)
Q Consensus 164 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~-----~~-------~i~v~d~~~~~~~~~~ 226 (393)
+++.|+ ..+.+||..+++-.. ...+. .......++.+++.|. ++ .+..||..+++-..+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344455 578999998887443 33221 1222334666666553 11 3788999887754332
Q ss_pred CCCC---cEEEEEEeCCEEEEEeCC--------CcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecC-C--
Q 016224 227 GPVG---QVYAMAVGNDLLFAGTQD--------GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSM-D-- 292 (393)
Q Consensus 227 ~~~~---~v~~l~~~~~~l~~~~~d--------g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~-d-- 292 (393)
.... ....+.+...+++.|+.+ ..+.+||+.+.. ++.+..+......-.++..++.+++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEETTEEEEECCBCTTS
T ss_pred CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCCcccceeEEEECCEEEEEeCCCCCC
Confidence 2211 112223333366666632 457888877642 22222222222222334456667777765 2
Q ss_pred ---CcEEEeeCCCcce--eeEeccCccceEEEEEcCCEEEEEeCCC-----cEEEEEcCCC
Q 016224 293 ---NSIRVWNLETLQC--IQTLTEHTSVVMSLLCWDQFLLSCSLDK-----TIKVWFATDS 343 (393)
Q Consensus 293 ---g~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~l~s~s~dg-----~i~iwd~~~~ 343 (393)
..+.+||+.+.+- +..+........++...+++++.|+.++ .+.+||+.+.
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 4689999887543 2222222222344455677777777654 4788888654
No 291
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.11 Score=48.25 Aligned_cols=143 Identities=8% Similarity=-0.015 Sum_probs=86.3
Q ss_pred EEeeEec---CcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCC-C----cEEEEECCCCeE
Q 016224 113 LCRNWVQ---GNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKD-E----TVRVWDCASGQC 184 (393)
Q Consensus 113 ~c~~~~~---~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~d-g----~v~iwd~~~~~~ 184 (393)
..+++.+ +.+++....+.|+.+|...+ +.. .+.........|+|++++++|+.+... + .+.+.+. .+..
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-YVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTT-EEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCC-EEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 5567774 34555554488999998876 443 333355678899999999977766542 1 2333443 2221
Q ss_pred E--EEEe-cCCc-eEEEEe-CCCEEEEE-cCCeEEEEECCCCceeee--cCCCCcEEEEEEeCC---EEEEEeCCCcEEE
Q 016224 185 A--GVIN-LGGE-VGCMIS-EGPWIFIG-VTNFVKAWNTQTNTDLSL--SGPVGQVYAMAVGND---LLFAGTQDGAILA 253 (393)
Q Consensus 185 ~--~~~~-~~~~-~~~~~~-~~~~l~~~-~~~~i~v~d~~~~~~~~~--~~~~~~v~~l~~~~~---~l~~~~~dg~I~v 253 (393)
. ..+. ...+ -..+.+ ++.++++. ..+.|..++..++....+ .........|+++++ ++++-...+.|..
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1 2221 2222 223344 56666665 557999999987765222 222345778999987 4455556788999
Q ss_pred EEecc
Q 016224 254 WKFNV 258 (393)
Q Consensus 254 wd~~~ 258 (393)
++...
T Consensus 297 ~~~d~ 301 (430)
T 3tc9_A 297 SDYDW 301 (430)
T ss_dssp EEEET
T ss_pred EeCCc
Confidence 88764
No 292
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.26 E-value=0.1 Score=47.06 Aligned_cols=224 Identities=9% Similarity=-0.038 Sum_probs=121.3
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEE--eCCCEEE-EE-cCCeEEEEECCCCceeee-cCC
Q 016224 154 SGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMI--SEGPWIF-IG-VTNFVKAWNTQTNTDLSL-SGP 228 (393)
Q Consensus 154 ~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~l~-~~-~~~~i~v~d~~~~~~~~~-~~~ 228 (393)
+|.+..++ .+|+.+ ....|+..++........+........+. .....|+ +. ..+.|..+++.......+ ...
T Consensus 37 ~C~~~~~~-~~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 114 (349)
T 3v64_C 37 SCKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 114 (349)
T ss_dssp CEEESSSC-CEEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred cccccccC-ceeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC
Confidence 34444443 333333 33457777877665554444433343333 3444444 44 456888899887654432 223
Q ss_pred CCcEEEEEEeCC---EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCE-EEEecCC-CcEEEeeCC
Q 016224 229 VGQVYAMAVGND---LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANK-LYSGSMD-NSIRVWNLE 301 (393)
Q Consensus 229 ~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~-l~sg~~d-g~i~iwd~~ 301 (393)
......+++++. ++++-...+.|.+.++..... .............++++ +.. +++-... +.|..+++.
T Consensus 115 ~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 115 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce----EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 344567787753 556666678899998875421 11122222334566665 344 4444444 788888876
Q ss_pred CcceeeEe-ccCccceEEEEEc--CCEEE-EEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEe
Q 016224 302 TLQCIQTL-TEHTSVVMSLLCW--DQFLL-SCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSC 377 (393)
Q Consensus 302 ~~~~~~~~-~~~~~~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s 377 (393)
.. ....+ ...-..-..|+++ +..|+ +-...+.|..+|+.... ...+.... ......++.. ++.++++-.
T Consensus 191 G~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-~~~~~~~~-~~~P~giav~----~~~ly~td~ 263 (349)
T 3v64_C 191 GS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQG-LPHPFAITVF----EDSLYWTDW 263 (349)
T ss_dssp SC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS-CSSEEEEEEE----TTEEEEEET
T ss_pred CC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-eEEEEeCC-CCCceEEEEE----CCEEEEecC
Confidence 43 33333 2223345778887 44444 44556789999986433 23332211 2234555551 223556666
Q ss_pred CCCeEEEEeCCce
Q 016224 378 NDNSVRFYDLPSV 390 (393)
Q Consensus 378 ~dg~I~iwd~~s~ 390 (393)
..+.|..++..+|
T Consensus 264 ~~~~V~~~~~~~G 276 (349)
T 3v64_C 264 HTKSINSANKFTG 276 (349)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCeEEEEEccCC
Confidence 6788888875554
No 293
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.25 E-value=0.27 Score=51.75 Aligned_cols=265 Identities=13% Similarity=0.092 Sum_probs=148.0
Q ss_pred cEEEecCCCeEEEEECCCCcE-----EEEEecC----CcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC--------e
Q 016224 121 NCMYGEKCKFLHSWTVGDGFK-----LLTQLEG----HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG--------Q 183 (393)
Q Consensus 121 ~~~~g~~dg~i~vwd~~~~~~-----~~~~l~~----h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~--------~ 183 (393)
.++.+..+|.++.-.+..... .+..++- ....-++|++-.+ .+|+.|+..|.=.+|.+... +
T Consensus 288 ~~LL~~~~G~l~~l~l~~d~~~~~~~~V~~l~i~~~~~~~~~ssl~~l~~-g~lFvgS~~Gds~l~~~~~~~~~~~~~~~ 366 (1158)
T 3ei3_A 288 RYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDN-GVVFVGSRLGDSQLVKLNVDSNEQGSYVV 366 (1158)
T ss_dssp EEEEEETTCEEEEEEEEEEC-----CEEEEEEEEEEEECSCCSEEEECST-TEEEEECSSSCEEEEEECSSCCTTSCCEE
T ss_pred EEEEEeCCCCEEEEEEEEcCCccCceeEEEEEEEEcCCccCccEEEEECC-CEEEEEEecCCcEEEEEecCCCCccceEE
Confidence 466788899887655431101 2222221 1222245666544 48999998887777776543 3
Q ss_pred EEEEEecCCceEEEEe-------CCCEEEEE---cCCeEEEEECCCCcee----eecCCCCcEEEEEEe-----CCEEEE
Q 016224 184 CAGVINLGGEVGCMIS-------EGPWIFIG---VTNFVKAWNTQTNTDL----SLSGPVGQVYAMAVG-----NDLLFA 244 (393)
Q Consensus 184 ~~~~~~~~~~~~~~~~-------~~~~l~~~---~~~~i~v~d~~~~~~~----~~~~~~~~v~~l~~~-----~~~l~~ 244 (393)
.+..+..-.++..+.- ..++++++ .++.++++.-.-+-.. .+. ....++.+... .++|+.
T Consensus 367 ~~~~~~N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~~l~-gv~~iWtl~~~~~~~~~~yLvl 445 (1158)
T 3ei3_A 367 AMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLP-GIKGLWPLRSDPNRETDDTLVL 445 (1158)
T ss_dssp EEEEECCCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEEEEEEECCC-SCCEEEEECCCSSCSSCCEEEE
T ss_pred eEeeecCcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEEEEEeecCC-CccEEEEEeecCCCCCCCEEEE
Confidence 4566666566655431 12344443 4567877653322221 222 23556666543 127777
Q ss_pred EeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccC-ccceEEEEEcC
Q 016224 245 GTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEH-TSVVMSLLCWD 323 (393)
Q Consensus 245 ~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~l~~~~ 323 (393)
+..+.+ .++.+............+......+.+-...++.++=... ..|++.+......+..+... ...|...+..+
T Consensus 446 S~~~~T-~Vl~i~~e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~-~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~ 523 (1158)
T 3ei3_A 446 SFVGQT-RVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITS-ASVRLVSQEPKALVSEWKEPQAKNISVASCNS 523 (1158)
T ss_dssp EETTEE-EEEEEETTEEEEECCTTCCSSSCEEEEEEETTTEEEEEES-SCEEEEESSSCCEEEEECCTTCCCCCEEEECS
T ss_pred ECCCCe-EEEEEeCCcccccccccccCCCCcEEEEEcCCCeEEEEec-CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC
Confidence 666666 4555532211000011111122233333334455554443 45788887766677777643 34677777777
Q ss_pred CEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCC---CcEEEEEeC-CCeEEEEeCCcee
Q 016224 324 QFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEG---KPVLLCSCN-DNSVRFYDLPSVI 391 (393)
Q Consensus 324 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~l~s~s~-dg~I~iwd~~s~~ 391 (393)
.+++.++ .+.+.++.+.++. +........+..+.++.+.+..++ ..+++.|.. |++|+|+++++.+
T Consensus 524 ~~vvva~-g~~l~~fel~~~~-L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 524 SQVVVAV-GRALYYLQIHPQE-LRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp SEEEEEE-TTEEEEEEEETTE-EEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEE-CCEEEEEEeeCCc-eeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 7777775 6788888886543 333333334456888887764322 358999997 9999999998754
No 294
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.24 E-value=0.074 Score=47.94 Aligned_cols=229 Identities=9% Similarity=0.060 Sum_probs=114.8
Q ss_pred cCcEE-Eec-CCCeEEEEECCC---CcEEEEEec-CCcCCEEEEEecCCCCEEEEEeC-C---------CcEEEEECCCC
Q 016224 119 QGNCM-YGE-KCKFLHSWTVGD---GFKLLTQLE-GHQKVVSGITLPSGSDKLYSGSK-D---------ETVRVWDCASG 182 (393)
Q Consensus 119 ~~~~~-~g~-~dg~i~vwd~~~---~~~~~~~l~-~h~~~I~~i~~s~~~~~l~s~s~-d---------g~v~iwd~~~~ 182 (393)
.+.++ +|+ ....+.++|..+ .++.+..+. .....-..+.+ ++.+++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 44444 343 445788999863 233333333 11112222222 4566666665 2 46889999887
Q ss_pred eEEEEEecC-C---ceEEEEeCCCEEEEEc-C---------------------------------------CeEEEEECC
Q 016224 183 QCAGVINLG-G---EVGCMISEGPWIFIGV-T---------------------------------------NFVKAWNTQ 218 (393)
Q Consensus 183 ~~~~~~~~~-~---~~~~~~~~~~~l~~~~-~---------------------------------------~~i~v~d~~ 218 (393)
+-...-... . ....+..++++++.|. + +.+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 543322222 1 1233446677666652 2 579999999
Q ss_pred CCceeeecCC--CCcE-EEEEEeCC-EEEEEeC------CCcEEEEEeccCCccccCceeecCc--eeeEEEEEEcCCEE
Q 016224 219 TNTDLSLSGP--VGQV-YAMAVGND-LLFAGTQ------DGAILAWKFNVTTNCFEPAASLKGH--SLAVVSLVVGANKL 286 (393)
Q Consensus 219 ~~~~~~~~~~--~~~v-~~l~~~~~-~l~~~~~------dg~I~vwd~~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~l 286 (393)
+.+-..+... ...- .+++...+ +++.|+. ...+.+||+......+..+..+... .....++..++.++
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iy 256 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLI 256 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEE
T ss_pred CCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEE
Confidence 8875533211 1111 33444445 5666553 3457778763333333332222111 11122445566677
Q ss_pred EEecCC----------------------CcEEEeeCCCcc--eeeEeccCccceEEEEEcCCEEEEEeCCC------cEE
Q 016224 287 YSGSMD----------------------NSIRVWNLETLQ--CIQTLTEHTSVVMSLLCWDQFLLSCSLDK------TIK 336 (393)
Q Consensus 287 ~sg~~d----------------------g~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~~l~s~s~dg------~i~ 336 (393)
+.|+.+ ..+.+||+.+.+ .+..+........++.+.+++++.|+.++ .|.
T Consensus 257 v~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~ 336 (357)
T 2uvk_A 257 FAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSV 336 (357)
T ss_dssp EECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEE
T ss_pred EEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEE
Confidence 777632 257789987643 33334333333345556678888888653 355
Q ss_pred EEEcCCCcceEEE
Q 016224 337 VWFATDSGNLEVT 349 (393)
Q Consensus 337 iwd~~~~~~~~~~ 349 (393)
++++++.+..+..
T Consensus 337 ~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 337 LITVKDNKVTVQN 349 (357)
T ss_dssp EEEC-CCSCEEEC
T ss_pred EEEEcCcEeEeee
Confidence 5677766554443
No 295
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.19 E-value=0.11 Score=46.09 Aligned_cols=216 Identities=12% Similarity=0.071 Sum_probs=122.4
Q ss_pred CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe-CCCcEEEEECCC----CeEEEEEec--CCce-EEEE
Q 016224 127 KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVRVWDCAS----GQCAGVINL--GGEV-GCMI 198 (393)
Q Consensus 127 ~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~~----~~~~~~~~~--~~~~-~~~~ 198 (393)
....|+..|+... +....+. .......++|++.++.|+.+. ..+.|..+++.. ......+.. ..+. ..+.
T Consensus 8 ~~~~I~~i~~~~~-~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 8 NRHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp CBSSEEEEETTSC-CCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred CCCeEEEEECCCc-ceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe
Confidence 3456888898876 3333343 345678999998766665554 568999999876 222222321 1222 2222
Q ss_pred eCCCEEE-EE-cCCeEEEEECCCCceeee-cCCCCcEEEEEEeCC--EEEEEeC-C-CcEEEEEeccCCccccCceee-c
Q 016224 199 SEGPWIF-IG-VTNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND--LLFAGTQ-D-GAILAWKFNVTTNCFEPAASL-K 270 (393)
Q Consensus 199 ~~~~~l~-~~-~~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~--~l~~~~~-d-g~I~vwd~~~~~~~~~~~~~~-~ 270 (393)
..+..|+ +. ..+.|.+++........+ .........++++|. .|+.+.. . +.|..+++.... ...+ .
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-----~~~~~~ 160 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----IYSLVT 160 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-----EEEEEC
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-----eEEEEE
Confidence 3344444 43 556899999876554432 334457789999874 4444443 3 678888775432 1111 1
Q ss_pred CceeeEEEEEEc--CCEEE-EecCCCcEEEeeCCCcceeeEec-c--CccceEEEEEcCCE-EEEEeCCCcEEEEEcCCC
Q 016224 271 GHSLAVVSLVVG--ANKLY-SGSMDNSIRVWNLETLQCIQTLT-E--HTSVVMSLLCWDQF-LLSCSLDKTIKVWFATDS 343 (393)
Q Consensus 271 ~~~~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~~~~~~~~~-~--~~~~v~~l~~~~~~-l~s~s~dg~i~iwd~~~~ 343 (393)
..-.....++++ ++.|+ +-...+.|..+|+.. .....+. . .......+++.+.. +++-...+.|..++..++
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCC
Confidence 122234566665 45554 445667999999874 3233332 1 12234566666554 445556778999987666
Q ss_pred cceEEEE
Q 016224 344 GNLEVTY 350 (393)
Q Consensus 344 ~~~~~~~ 350 (393)
+....+.
T Consensus 240 ~~~~~i~ 246 (316)
T 1ijq_A 240 SDVNLLA 246 (316)
T ss_dssp CCCEEEE
T ss_pred cceEEEe
Confidence 6555443
No 296
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.19 E-value=0.042 Score=48.51 Aligned_cols=211 Identities=12% Similarity=0.146 Sum_probs=107.8
Q ss_pred CeEEEEECCCC-cEEEEEecCCcCCEEEEEecCCCCEEEEEeC----C-----CcEEEEECCCCeEEEEEecCC---ceE
Q 016224 129 KFLHSWTVGDG-FKLLTQLEGHQKVVSGITLPSGSDKLYSGSK----D-----ETVRVWDCASGQCAGVINLGG---EVG 195 (393)
Q Consensus 129 g~i~vwd~~~~-~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~----d-----g~v~iwd~~~~~~~~~~~~~~---~~~ 195 (393)
..+.+||..+. ++.+..+......- +++.. ++.+++.|+. + ..+.+||..+.+-...-..+. ...
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 35788887765 11111111111111 12222 5566666665 2 468899988876433322221 123
Q ss_pred EEEeCCCEEEEEc------CCeEEEEECCCCceeeecC---CCCcEEEEEEeCCEEEEEeCC-----CcEEEEEeccCCc
Q 016224 196 CMISEGPWIFIGV------TNFVKAWNTQTNTDLSLSG---PVGQVYAMAVGNDLLFAGTQD-----GAILAWKFNVTTN 261 (393)
Q Consensus 196 ~~~~~~~~l~~~~------~~~i~v~d~~~~~~~~~~~---~~~~v~~l~~~~~~l~~~~~d-----g~I~vwd~~~~~~ 261 (393)
....++++++.|. ...+.+||+.+.+-..+.. .......+.+...+++.|+.+ ..+.+||+.+..
T Consensus 117 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~- 195 (308)
T 1zgk_A 117 VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE- 195 (308)
T ss_dssp EEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE-
T ss_pred EEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCe-
Confidence 3334666666542 2478899998876543322 112222333333366666654 458888876542
Q ss_pred cccCceeecCceeeEEEEEEcCCEEEEecCC-----CcEEEeeCCCcceee--EeccCccceEEEEEcCCEEEEEeCC--
Q 016224 262 CFEPAASLKGHSLAVVSLVVGANKLYSGSMD-----NSIRVWNLETLQCIQ--TLTEHTSVVMSLLCWDQFLLSCSLD-- 332 (393)
Q Consensus 262 ~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~l~s~s~d-- 332 (393)
+..+..+........++..++.+++.|+.+ ..+.+||+.+.+-.. .+.........+...+++++.|+.+
T Consensus 196 -W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 274 (308)
T 1zgk_A 196 -WRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGH 274 (308)
T ss_dssp -EEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred -EeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCC
Confidence 222222221122223344566677777654 568999998754322 2222222233444556777777754
Q ss_pred ---CcEEEEEcCCC
Q 016224 333 ---KTIKVWFATDS 343 (393)
Q Consensus 333 ---g~i~iwd~~~~ 343 (393)
..+.+||+.+.
T Consensus 275 ~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 275 TFLDSVECYDPDTD 288 (308)
T ss_dssp CBCCEEEEEETTTT
T ss_pred cccceEEEEcCCCC
Confidence 34777887653
No 297
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.17 E-value=0.15 Score=47.43 Aligned_cols=143 Identities=9% Similarity=0.055 Sum_probs=82.0
Q ss_pred EEeeEec----CcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCC----c-EEEEECCCCe
Q 016224 113 LCRNWVQ----GNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDE----T-VRVWDCASGQ 183 (393)
Q Consensus 113 ~c~~~~~----~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg----~-v~iwd~~~~~ 183 (393)
..++|.+ +.++.+...+.|+.+|..++ +.. .+.........|+|+++++ |+.+...+ . +...+...+.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-~v~-~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-YVD-IKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTT-EEE-EECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCC-EEE-EeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 5677775 45556555589999998877 444 3444556789999999999 55554322 1 3333322211
Q ss_pred E-EEEE-ecCCce-EEEEe-CCCEEEEE-cCCeEEEEECCCCce-eee--cCCCCcEEEEEEeCC---EEEEEeCCCcEE
Q 016224 184 C-AGVI-NLGGEV-GCMIS-EGPWIFIG-VTNFVKAWNTQTNTD-LSL--SGPVGQVYAMAVGND---LLFAGTQDGAIL 252 (393)
Q Consensus 184 ~-~~~~-~~~~~~-~~~~~-~~~~l~~~-~~~~i~v~d~~~~~~-~~~--~~~~~~v~~l~~~~~---~l~~~~~dg~I~ 252 (393)
. ...+ ....+. ..+.+ ++.+.++. ..+.|+.++..++.. ..+ ......-..|+++++ ++++-...+.|.
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 1 0111 112221 22334 45555554 456899999987765 221 122223346999887 444555678899
Q ss_pred EEEecc
Q 016224 253 AWKFNV 258 (393)
Q Consensus 253 vwd~~~ 258 (393)
.+++..
T Consensus 299 ~~~~d~ 304 (433)
T 4hw6_A 299 RVDYNR 304 (433)
T ss_dssp EEEBCT
T ss_pred EEeCCC
Confidence 988764
No 298
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.13 E-value=0.012 Score=61.75 Aligned_cols=213 Identities=11% Similarity=0.154 Sum_probs=128.1
Q ss_pred CcEEEEECCCCeEEEEEecCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcEEEEEEeCC-EEEEEeCCCc
Q 016224 172 ETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND-LLFAGTQDGA 250 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~~~dg~ 250 (393)
.+|.|-|+..+..+...........+.+..++++.-...++.++|+++...+........|.-..|-.. .|+..+ +..
T Consensus 48 ~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT-~~a 126 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT-DNA 126 (1630)
T ss_pred ceEEEEECCCCCCcccccccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc-CCe
Confidence 378888888776665555555556666777788777778999999999887755555667888888544 554443 567
Q ss_pred EEEEEeccCCccccCceeecCc----eeeEEEEEEcC--CEEE-Ee------cCCCcEEEeeCCCcceeeEeccCccceE
Q 016224 251 ILAWKFNVTTNCFEPAASLKGH----SLAVVSLVVGA--NKLY-SG------SMDNSIRVWNLETLQCIQTLTEHTSVVM 317 (393)
Q Consensus 251 I~vwd~~~~~~~~~~~~~~~~~----~~~v~~l~~~~--~~l~-sg------~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 317 (393)
|+.|++.... .|.+.+..| ...|.....+. ++++ +| ...|.+.+|..+. +.-+.+.+|.+...
T Consensus 127 VyHW~~~~~s---~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~ 202 (1630)
T 1xi4_A 127 VYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFA 202 (1630)
T ss_pred EEEeccCCCC---ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhh
Confidence 9999996532 444444333 34455555543 3433 22 2458899999874 33466677776665
Q ss_pred EEEEcC----CEEEE-EeC---CCcEEEEEcCCC---c-ce-----EEEEeec-CCccEEEEEeeeCCCCCcEEEEEeCC
Q 016224 318 SLLCWD----QFLLS-CSL---DKTIKVWFATDS---G-NL-----EVTYTHN-EEHGVLALCGMPDSEGKPVLLCSCND 379 (393)
Q Consensus 318 ~l~~~~----~~l~s-~s~---dg~i~iwd~~~~---~-~~-----~~~~~~~-~~~~v~~~~~~~~~~~~~~l~s~s~d 379 (393)
.+...+ ..|++ +.. .++++|-++... . .. ....... ...-..++..++... ++..-+.-
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g---~iy~itk~ 279 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLITKY 279 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC---EEEEEecC
Confidence 555542 12222 221 268888888543 1 10 0111110 011122333333322 77788889
Q ss_pred CeEEEEeCCceee
Q 016224 380 NSVRFYDLPSVII 392 (393)
Q Consensus 380 g~I~iwd~~s~~l 392 (393)
|.|++||+.|+.+
T Consensus 280 G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 280 GYIHLYDLETGTC 292 (1630)
T ss_pred ceEEEEecccchh
Confidence 9999999999864
No 299
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.13 E-value=0.082 Score=55.76 Aligned_cols=212 Identities=8% Similarity=0.108 Sum_probs=130.2
Q ss_pred CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEEE-eCCCEEE
Q 016224 127 KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMI-SEGPWIF 205 (393)
Q Consensus 127 ~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 205 (393)
....|.|.|+.++....+.-..-.+.| .+|..+.||-=. ..++.|+|+++.+.+..+.....+..+- -+...|+
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~AdsAI----MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~ 120 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISADSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 120 (1630)
T ss_pred CCceEEEEECCCCCCcccccccchhhc----cCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeE
Confidence 344888999887644433322223333 577777666544 6799999999999999999988877664 4667777
Q ss_pred EEcCCeEEEEECCCCcee--eecCC----CCcEEEEEEeCC---EEEEEe------CCCcEEEEEeccCCccccCceeec
Q 016224 206 IGVTNFVKAWNTQTNTDL--SLSGP----VGQVYAMAVGND---LLFAGT------QDGAILAWKFNVTTNCFEPAASLK 270 (393)
Q Consensus 206 ~~~~~~i~v~d~~~~~~~--~~~~~----~~~v~~l~~~~~---~l~~~~------~dg~I~vwd~~~~~~~~~~~~~~~ 270 (393)
.-.+..|..|++...... .+..| ..+|..-..+++ .+++|- -.|.+.+|...... .+.+.
T Consensus 121 lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-----sQ~ie 195 (1630)
T 1xi4_A 121 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIE 195 (1630)
T ss_pred EEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-----chhhh
Confidence 778899999999753322 22222 456777777776 333332 45788899877642 34556
Q ss_pred CceeeEEEEEEcCC-----EEEEec---CCCcEEEeeCCCc---ce------eeEeccC---ccceEEEEEcC--CEEEE
Q 016224 271 GHSLAVVSLVVGAN-----KLYSGS---MDNSIRVWNLETL---QC------IQTLTEH---TSVVMSLLCWD--QFLLS 328 (393)
Q Consensus 271 ~~~~~v~~l~~~~~-----~l~sg~---~dg~i~iwd~~~~---~~------~~~~~~~---~~~v~~l~~~~--~~l~s 328 (393)
+|...-..+..+++ .+..+. ..+.++|.++... .. +..+-.. ..--.++..+. ..+..
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 66555544444322 222111 2368888888532 11 1111111 11223444453 46777
Q ss_pred EeCCCcEEEEEcCCCcceEE
Q 016224 329 CSLDKTIKVWFATDSGNLEV 348 (393)
Q Consensus 329 ~s~dg~i~iwd~~~~~~~~~ 348 (393)
.+.-|.|.+||+.++..+..
T Consensus 276 itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EecCceEEEEecccchhhhh
Confidence 88899999999998876543
No 300
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.08 E-value=0.1 Score=46.11 Aligned_cols=210 Identities=10% Similarity=0.094 Sum_probs=106.6
Q ss_pred eEEEEECCCCcEEE-EEecCC-cCCEEEEEecCCCCEEEEEeC----CC-------cEEEEECCCCeEEEEEecCC---c
Q 016224 130 FLHSWTVGDGFKLL-TQLEGH-QKVVSGITLPSGSDKLYSGSK----DE-------TVRVWDCASGQCAGVINLGG---E 193 (393)
Q Consensus 130 ~i~vwd~~~~~~~~-~~l~~h-~~~I~~i~~s~~~~~l~s~s~----dg-------~v~iwd~~~~~~~~~~~~~~---~ 193 (393)
.+.+||..+. +-. ..+... ...-.++ ...++.+++.|+. ++ .+.+||..+.+-...-..+. .
T Consensus 25 ~~~~yd~~~~-~W~~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMEN-ECYLTALAEQIPRNHSSI-VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTT-EEEEEEECTTSCSSEEEE-ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred ceEEECCCCC-ceecccCCccCCccceEE-EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 4789998876 322 223221 1222233 3456777788873 12 27788888775443222221 1
Q ss_pred eEEEEeCCCEEEEE-cC-------CeEEEEECCCCceeeecCCCCcE--EEEEEeCC-EEEEEeC------CCcEEEEEe
Q 016224 194 VGCMISEGPWIFIG-VT-------NFVKAWNTQTNTDLSLSGPVGQV--YAMAVGND-LLFAGTQ------DGAILAWKF 256 (393)
Q Consensus 194 ~~~~~~~~~~l~~~-~~-------~~i~v~d~~~~~~~~~~~~~~~v--~~l~~~~~-~l~~~~~------dg~I~vwd~ 256 (393)
......++.+++.| .+ +.+.+||+.+.+-..+....... .+++...+ +++.|+. -..+.+||+
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 22333456665554 32 25888999887755433222111 12222344 5566653 235888887
Q ss_pred ccCCccccCceeecCceeeEEEEEEcCCEEEEecCC-----CcEEEeeCCCcce--eeEeccCccceEEEEEcCCEEEEE
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMD-----NSIRVWNLETLQC--IQTLTEHTSVVMSLLCWDQFLLSC 329 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~d-----g~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~l~s~ 329 (393)
.+.. +..+..+........++..++.+++.|+.+ ..+.+||+.+.+- +..+.........+.+.+.+++.|
T Consensus 183 ~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 260 (318)
T 2woz_A 183 KKGD--WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIG 260 (318)
T ss_dssp TTTE--EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCCE--EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEEC
Confidence 7643 222222211111122344566667777643 3577899877543 222222222234445557777777
Q ss_pred eCC--------------CcEEEEEcCCC
Q 016224 330 SLD--------------KTIKVWFATDS 343 (393)
Q Consensus 330 s~d--------------g~i~iwd~~~~ 343 (393)
+.+ ..+.+||+.+.
T Consensus 261 G~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 261 GFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp CBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred CeeccCCCCceeccceeeeEEEEeCCCC
Confidence 654 34777887654
No 301
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=97.07 E-value=0.068 Score=46.65 Aligned_cols=219 Identities=16% Similarity=0.093 Sum_probs=120.3
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEE-EEecCCceEEEEeCCC-EEEEEcCCeEEEEECCCCcee-eecC
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAG-VINLGGEVGCMISEGP-WIFIGVTNFVKAWNTQTNTDL-SLSG 227 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~-~l~~~~~~~i~v~d~~~~~~~-~~~~ 227 (393)
..|..|+..... .++. . ||.|..|-....-.+. .......+..+..... .++. .++.|..|-....-.+ ....
T Consensus 24 ~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~~G~v~~wG~n~~Gqlg~P~~ 99 (282)
T 3qhy_B 24 SGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-KDGEVIAWGGNEDGQTTVPAE 99 (282)
T ss_dssp SSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGG
T ss_pred CCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-ECCEEEEeeCCCCCCCCCCcc
Confidence 357777765432 2333 4 8999999765421111 0011223444444333 3334 4888988876543322 1112
Q ss_pred CCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceee
Q 016224 228 PVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQ 307 (393)
Q Consensus 228 ~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 307 (393)
....|..++...+..++-+ +|.|+.|=.........+ ......|..++....+.+.-. ||.|..|-....-.+.
T Consensus 100 ~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~----~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg 173 (282)
T 3qhy_B 100 ARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVP----AEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTT 173 (282)
T ss_dssp GSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCC----GGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTS
T ss_pred cCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCC----ccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCC
Confidence 2357889998888555556 999999976543221111 112345777777666544444 7999999765422221
Q ss_pred EeccCccceEEEEEcCCEEEEEeCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 308 TLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 308 ~~~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
.-..-...|..++.-..+.+.- .||.|..|-.....++..-. .....+..++.-... .++.. ||.|..|-.
T Consensus 174 ~p~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~--~~~~~v~~i~~G~~h----~~al~--~g~v~~wG~ 244 (282)
T 3qhy_B 174 VPAEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPT--EALSGVSAIASGEWY----SLALK--NGKVIAWGS 244 (282)
T ss_dssp CCGGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCG--GGGSSCCEEEECSSC----EEEEE--TTEEEEEST
T ss_pred CceecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCc--ccCCCceEEEcCCCE----EEEEE--CCEEEEecC
Confidence 1111235678887776655545 69999999765544332111 111235555432221 23333 899999864
Q ss_pred C
Q 016224 388 P 388 (393)
Q Consensus 388 ~ 388 (393)
.
T Consensus 245 n 245 (282)
T 3qhy_B 245 S 245 (282)
T ss_dssp T
T ss_pred C
Confidence 3
No 302
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.01 E-value=0.34 Score=48.57 Aligned_cols=227 Identities=16% Similarity=0.143 Sum_probs=126.2
Q ss_pred cceEEeeEecC-cEEEecCCCeEEEEECCCCcEEEEEe-cCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 016224 110 TDILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQL-EGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGV 187 (393)
Q Consensus 110 ~~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~~~l-~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 187 (393)
..|.|+.-... .+..|+.+| |..||-.+ ++..... ......|.+|....++ .|..|+.+| +..||..+.+....
T Consensus 22 n~V~~I~qD~~G~lWigT~~G-L~ryDG~~-~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~ 97 (758)
T 3ott_A 22 SVVSCFLQDSEGLIWIGSNKG-LFSYDGYS-TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQP 97 (758)
T ss_dssp CCEEEEEECTTSCEEEEESSC-EEEECSSC-EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCC
T ss_pred ceEEEEEECCCCCEEEEECCC-ccccCCCc-eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECc
Confidence 36888877655 466788877 45566322 1111000 1123568888877665 567777665 78999887654321
Q ss_pred Ee-cCCceEEEEeCCCEEEEEcCCeEEEEECCCCceeeec-----CCCCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCC
Q 016224 188 IN-LGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLS-----GPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTT 260 (393)
Q Consensus 188 ~~-~~~~~~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~-----~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~ 260 (393)
.. ....+..+......|.++..+.+..|+..+++...+. .....|.++....+ .|.+++.+ -|..++.....
T Consensus 98 ~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~ 176 (758)
T 3ott_A 98 ETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGK 176 (758)
T ss_dssp SCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTE
T ss_pred ccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCc
Confidence 00 1122433433334455555557889998877654331 12356888888755 56666655 47777765432
Q ss_pred ccccCcee-ecCceeeEEEEEEc--CCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEc-CCEEEEEeCCCcEE
Q 016224 261 NCFEPAAS-LKGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCW-DQFLLSCSLDKTIK 336 (393)
Q Consensus 261 ~~~~~~~~-~~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~s~dg~i~ 336 (393)
........ .......|.++..+ ++.|..|+. +-|..+|..+++...........|.++..+ ...|..|+. +-|.
T Consensus 177 ~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~ 254 (758)
T 3ott_A 177 FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTD-NGLY 254 (758)
T ss_dssp EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEET-TEEE
T ss_pred eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeC-Ccee
Confidence 10000000 00012347777776 456666664 458889987765432211123457777776 345555664 4588
Q ss_pred EEEcCCC
Q 016224 337 VWFATDS 343 (393)
Q Consensus 337 iwd~~~~ 343 (393)
+++..+.
T Consensus 255 ~~~~~~~ 261 (758)
T 3ott_A 255 VYHNDTT 261 (758)
T ss_dssp EECCTTS
T ss_pred EEecCCC
Confidence 8887544
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.00 E-value=0.36 Score=48.60 Aligned_cols=213 Identities=10% Similarity=0.023 Sum_probs=116.2
Q ss_pred CCCcEEEEECCCCeEEEEEecCCceEEEE--eCCCEEE-EE-cCCeEEEEECCCC----c-eeeecCCCCcEEEEEEeCC
Q 016224 170 KDETVRVWDCASGQCAGVINLGGEVGCMI--SEGPWIF-IG-VTNFVKAWNTQTN----T-DLSLSGPVGQVYAMAVGND 240 (393)
Q Consensus 170 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~l~-~~-~~~~i~v~d~~~~----~-~~~~~~~~~~v~~l~~~~~ 240 (393)
....|+..++........+.....+..+. .....|+ +. ..+.|+.+++... . ...+.........|+++..
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 34578888887766555554444444433 2344444 44 4467888888753 1 2233334455667777643
Q ss_pred ---EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEec-C-CCcEEEeeCCCcceeeEeccCc
Q 016224 241 ---LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGS-M-DNSIRVWNLETLQCIQTLTEHT 313 (393)
Q Consensus 241 ---~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~-~-dg~i~iwd~~~~~~~~~~~~~~ 313 (393)
++++-...+.|.+.++..... ...+.........|+++ ..+|+... . .+.|.+.++........+...-
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~----~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l 557 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 557 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSE----EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred CCcEEEEecCCCeEEEEeCCCCeE----EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence 666666788899998875421 11111222335566765 34555443 2 3789988887544333333333
Q ss_pred cceEEEEEc--CCEEEEE-eCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 314 SVVMSLLCW--DQFLLSC-SLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 314 ~~v~~l~~~--~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
.....|+++ ...|+.+ .....|...++........+.....-....+++.. . +.++++-...+.|...+..+|
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~--~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--E--DKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--T--TEEEEEETTTTEEEEEETTTC
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--C--CEEEEEECCCCEEEEEeCCCC
Confidence 456778877 4555544 45678999998644333333222222234455542 2 235555556678887776555
No 304
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.95 E-value=0.19 Score=44.54 Aligned_cols=210 Identities=12% Similarity=0.029 Sum_probs=116.0
Q ss_pred CcEEEEECCCCeEEEEEecCCceEEEE--eCCCEEE-EE-cCCeEEEEECCC----Ccee-eecCCCCcEEEEEEeC--C
Q 016224 172 ETVRVWDCASGQCAGVINLGGEVGCMI--SEGPWIF-IG-VTNFVKAWNTQT----NTDL-SLSGPVGQVYAMAVGN--D 240 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~l~-~~-~~~~i~v~d~~~----~~~~-~~~~~~~~v~~l~~~~--~ 240 (393)
..|+..|+.+.+....+........+. ..+..|+ +. ..+.|..+++.. .... .+.........+++++ .
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 468888988876666555444444333 3344444 44 456899999876 2222 2222334557788864 2
Q ss_pred -EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEecC-C-CcEEEeeCCCcceeeEe-ccCcc
Q 016224 241 -LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGSM-D-NSIRVWNLETLQCIQTL-TEHTS 314 (393)
Q Consensus 241 -~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~~-d-g~i~iwd~~~~~~~~~~-~~~~~ 314 (393)
++++-...+.|.++++..... .............++++ +..|+.+.. . +.|...++. ++....+ ...-.
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~ 164 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQ 164 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSE----EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCS
T ss_pred eEEEEECCCCEEEEEeCCCCce----EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCC
Confidence 555556778899998765321 11111112234566665 445444443 3 688888875 3333333 22234
Q ss_pred ceEEEEEc--CCEEE-EEeCCCcEEEEEcCCCcceEEEEee-cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCce
Q 016224 315 VVMSLLCW--DQFLL-SCSLDKTIKVWFATDSGNLEVTYTH-NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSV 390 (393)
Q Consensus 315 ~v~~l~~~--~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~ 390 (393)
....|+++ ++.|+ +-+..+.|..+|+.. .....+... ........++.. ++.++++-...+.|..++..++
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~----~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF----EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE----TTEEEEEETTTTEEEEEETTTC
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEE----CCEEEEEECCCCeEEEEeCCCC
Confidence 45778887 45554 445567899999864 333333322 112234556552 2335666667788999887665
Q ss_pred e
Q 016224 391 I 391 (393)
Q Consensus 391 ~ 391 (393)
+
T Consensus 240 ~ 240 (316)
T 1ijq_A 240 S 240 (316)
T ss_dssp C
T ss_pred c
Confidence 4
No 305
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.93 E-value=0.18 Score=44.55 Aligned_cols=168 Identities=8% Similarity=0.102 Sum_probs=86.5
Q ss_pred cEEEEECCCCeEEEEEecC----C-ceEEEEeCCCEEEEEcC-----C-------eEEEEECCCCceeeecC---CCCcE
Q 016224 173 TVRVWDCASGQCAGVINLG----G-EVGCMISEGPWIFIGVT-----N-------FVKAWNTQTNTDLSLSG---PVGQV 232 (393)
Q Consensus 173 ~v~iwd~~~~~~~~~~~~~----~-~~~~~~~~~~~l~~~~~-----~-------~i~v~d~~~~~~~~~~~---~~~~v 232 (393)
.+.+||..+.+-.. .... . .......++.+++.|.. + .+..||..+.+-..+.. .....
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 47889998877544 2221 1 12233346677666641 1 27788988877553322 11222
Q ss_pred EEEEEeCCEEEEEeCC-------CcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecC------CCcEEEee
Q 016224 233 YAMAVGNDLLFAGTQD-------GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSM------DNSIRVWN 299 (393)
Q Consensus 233 ~~l~~~~~~l~~~~~d-------g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~------dg~i~iwd 299 (393)
....+...+++.|+.+ ..+.+||+.+.. ++.+..+......-.++..++.+++.|+. -..+.+||
T Consensus 104 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEE
T ss_pred ceEEECCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEc
Confidence 2333333466666653 246677766542 22222222111111233356666666664 24689999
Q ss_pred CCCcceee--EeccCccceEEEEEcCCEEEEEeCC-----CcEEEEEcCCC
Q 016224 300 LETLQCIQ--TLTEHTSVVMSLLCWDQFLLSCSLD-----KTIKVWFATDS 343 (393)
Q Consensus 300 ~~~~~~~~--~~~~~~~~v~~l~~~~~~l~s~s~d-----g~i~iwd~~~~ 343 (393)
+.+.+-.. .+........++.+.+.+++.|+.+ ..+.+||+.+.
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 182 PKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 98754322 2222222223444567777777654 34678888654
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.84 E-value=0.24 Score=44.12 Aligned_cols=225 Identities=9% Similarity=0.015 Sum_probs=117.6
Q ss_pred ceEEeeEecCcEEEecCCCeEEEEECCCC--cEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q 016224 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDG--FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVI 188 (393)
Q Consensus 111 ~i~c~~~~~~~~~~g~~dg~i~vwd~~~~--~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 188 (393)
.+..+.+.++..+.++..+.|+. ..+.+ ++.+.....+...+..|.+.+++..++.+ .+|.|.. ..+.++.-...
T Consensus 81 ~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~ 157 (327)
T 2xbg_A 81 RFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQAL 157 (327)
T ss_dssp EEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEE
T ss_pred cEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEe
Confidence 56677777766666666665544 23333 23322222244567888887666655554 4565432 22234332222
Q ss_pred ec--CCceEEE--EeCCCEEEEEcCCeEEEEECCCCcee--eecCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEeccCCc
Q 016224 189 NL--GGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFNVTTN 261 (393)
Q Consensus 189 ~~--~~~~~~~--~~~~~~l~~~~~~~i~v~d~~~~~~~--~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~ 261 (393)
.. ...+..+ .+++.+++++..+.+..-.-..+... ........+..+.+.++ .+++++.+|.+++.+...+ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G-~ 236 (327)
T 2xbg_A 158 VQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNS-E 236 (327)
T ss_dssp ECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEE-E
T ss_pred ecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCC-C
Confidence 22 1223222 24677888887776554432212221 12234567888888776 6666677888777642211 1
Q ss_pred cccCceee-cCceeeEEEEEEc-CCEEEEecCCCcEEEeeCCCcceeeEec---cCccceEEEEEc-CCEEEEEeCCCcE
Q 016224 262 CFEPAASL-KGHSLAVVSLVVG-ANKLYSGSMDNSIRVWNLETLQCIQTLT---EHTSVVMSLLCW-DQFLLSCSLDKTI 335 (393)
Q Consensus 262 ~~~~~~~~-~~~~~~v~~l~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~l~~~-~~~l~s~s~dg~i 335 (393)
.+..+... ..+...+..+.+. +..++.++.++.| ++....++.-..+. .....+.++.+. +..+++++.+|.|
T Consensus 237 tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i 315 (327)
T 2xbg_A 237 NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGIL 315 (327)
T ss_dssp EECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEE
T ss_pred eeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceE
Confidence 11211111 0122346777775 3344444557766 34444444333333 223456777774 6677888889987
Q ss_pred EEEEc
Q 016224 336 KVWFA 340 (393)
Q Consensus 336 ~iwd~ 340 (393)
.-++-
T Consensus 316 ~~~~~ 320 (327)
T 2xbg_A 316 LRYVT 320 (327)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 76653
No 307
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.81 E-value=0.25 Score=43.84 Aligned_cols=188 Identities=10% Similarity=0.051 Sum_probs=110.3
Q ss_pred EEeeEec--CcEEEec-CCCeEEEEECCCCcEEEEEecC----Cc--CCEEEEEe---cCCCCEEEEEe-----------
Q 016224 113 LCRNWVQ--GNCMYGE-KCKFLHSWTVGDGFKLLTQLEG----HQ--KVVSGITL---PSGSDKLYSGS----------- 169 (393)
Q Consensus 113 ~c~~~~~--~~~~~g~-~dg~i~vwd~~~~~~~~~~l~~----h~--~~I~~i~~---s~~~~~l~s~s----------- 169 (393)
-|..|.. +.++.++ ..+.|..|+...+......+.+ .. ..+..|.| .++++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4677875 4555666 6899999998755222223332 11 14689999 68877776543
Q ss_pred --CCCcEEEEECC---CCeEEEEEecCC--------------ceEEEE--eCCCEEEEE-cC-CeEEEEECCCCceeee-
Q 016224 170 --KDETVRVWDCA---SGQCAGVINLGG--------------EVGCMI--SEGPWIFIG-VT-NFVKAWNTQTNTDLSL- 225 (393)
Q Consensus 170 --~dg~v~iwd~~---~~~~~~~~~~~~--------------~~~~~~--~~~~~l~~~-~~-~~i~v~d~~~~~~~~~- 225 (393)
.+..|..+|+. +++.+....+.. ....+. .+|...+++ .. +.|...+........+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFA 175 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeee
Confidence 26789999999 888777766421 122222 466666644 55 6666666665433221
Q ss_pred -cC----CCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCcee-------ecCceeeEEEEEEcCCE-EEEec
Q 016224 226 -SG----PVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAAS-------LKGHSLAVVSLVVGANK-LYSGS 290 (393)
Q Consensus 226 -~~----~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~-------~~~~~~~v~~l~~~~~~-l~sg~ 290 (393)
.. .....+.|+++|+ +|++....|.|..+|+...... .+.. .......+.....+++. +++..
T Consensus 176 ~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~--~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 176 WESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW--PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp ECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC--CEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE
T ss_pred ecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce--eecccccCCcccccCcccccccccCCEEEEEEcC
Confidence 11 1123568999987 6666666999999998843210 1111 11122333344456776 55555
Q ss_pred CCCcEEEeeCCC
Q 016224 291 MDNSIRVWNLET 302 (393)
Q Consensus 291 ~dg~i~iwd~~~ 302 (393)
..+.+.+.+...
T Consensus 254 ~~~~~~l~S~Dg 265 (334)
T 2p9w_A 254 APYAISFRSWDN 265 (334)
T ss_dssp TTEEEEEECSST
T ss_pred CCCEEEEECCCC
Confidence 667777766544
No 308
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.78 E-value=0.32 Score=44.72 Aligned_cols=212 Identities=10% Similarity=0.004 Sum_probs=115.9
Q ss_pred CcEEEEECCCCeEEEEEecCCceEEEE--eCCCEEE-EE-cCCeEEEEECCCC----cee-eecCCCCcEEEEEEeC--C
Q 016224 172 ETVRVWDCASGQCAGVINLGGEVGCMI--SEGPWIF-IG-VTNFVKAWNTQTN----TDL-SLSGPVGQVYAMAVGN--D 240 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~l~-~~-~~~~i~v~d~~~~----~~~-~~~~~~~~v~~l~~~~--~ 240 (393)
..|+..++........+.....+..+. .....|+ +. ..+.|+.+++... ... ...........++++. .
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~ 171 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 171 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTT
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCC
Confidence 567777777665554444434443333 2344444 44 4568888887652 122 3333455677888875 2
Q ss_pred -EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEec--CCCcEEEeeCCCcceeeEeccCccc
Q 016224 241 -LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGS--MDNSIRVWNLETLQCIQTLTEHTSV 315 (393)
Q Consensus 241 -~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~ 315 (393)
++++-...+.|.+.++..... ...+.........|+++ +.+|+... ..+.|...++........+...-..
T Consensus 172 ~lY~~d~~~~~I~~~~~~g~~~----~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~ 247 (400)
T 3p5b_L 172 NIYWTDSVLGTVSVADTKGVKR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 247 (400)
T ss_dssp EEEEEETTTTEEEEECTTTCSE----EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSC
T ss_pred ceEEEECCCCeEEEEeCCCCce----EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCc
Confidence 555666678888888765421 11122222234566665 34554443 2478998988643333333333345
Q ss_pred eEEEEEc--CCEEEEE-eCCCcEEEEEcCCCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCcee
Q 016224 316 VMSLLCW--DQFLLSC-SLDKTIKVWFATDSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVI 391 (393)
Q Consensus 316 v~~l~~~--~~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~ 391 (393)
-..|+++ +..|+.+ .....|..+|+....................++. + ++.++++-...+.|..++..+|+
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~--~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--F--EDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--E--TTEEEEEESSSCSEEEEESSSCC
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--e--CCEEEEecCCCCeEEEEEcCCCC
Confidence 6778887 4555544 4567899999864333222222112223445554 2 22366666677889888866653
No 309
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.77 E-value=0.26 Score=43.68 Aligned_cols=197 Identities=9% Similarity=0.052 Sum_probs=113.8
Q ss_pred ceEEeeEec--CcEEE-ecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCC-EEEEEeCCCcEEEEECCCCeEEE
Q 016224 111 DILCRNWVQ--GNCMY-GEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSD-KLYSGSKDETVRVWDCASGQCAG 186 (393)
Q Consensus 111 ~i~c~~~~~--~~~~~-g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~ 186 (393)
....+.|.. +.++. -...+.|+.++...+......+...-.....+++.+.+. +.++-...+.|.+++++......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 456778874 34443 445678999988755211111222223456788887544 44555567899999987543332
Q ss_pred EEe-cCCceE--EEEeCCCEEEEEc---CCeEEEEECCCCceeee-cCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEe
Q 016224 187 VIN-LGGEVG--CMISEGPWIFIGV---TNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND---LLFAGTQDGAILAWKF 256 (393)
Q Consensus 187 ~~~-~~~~~~--~~~~~~~~l~~~~---~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~ 256 (393)
.+. ...... .+.+.+..++.+. .+.|...++.......+ .........|+++++ ++++=+..+.|..+|+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 222 112222 2334445555442 46888888875443322 333456789999974 4455556788999998
Q ss_pred ccCCccccCceeecCceeeEEEEEEcCC-EEEEecCCCcEEEeeCCCcceeeEecc
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVVGAN-KLYSGSMDNSIRVWNLETLQCIQTLTE 311 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~ 311 (393)
..... + ............++++++ .+++-...+.|..+|..+++.+..+..
T Consensus 196 dG~~~--~--~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 196 DGTNR--Q--AVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp TSCSC--E--EEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCCce--E--EEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 75321 1 111212233455566655 455666678999999988877666543
No 310
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.022 Score=51.00 Aligned_cols=100 Identities=11% Similarity=0.054 Sum_probs=66.3
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEecC--CceEEEE-e----CCCEEEE--EcCCeEEEEECCCCcee-eecC----C
Q 016224 163 DKLYSGSKDETVRVWDCASGQCAGVINLG--GEVGCMI-S----EGPWIFI--GVTNFVKAWNTQTNTDL-SLSG----P 228 (393)
Q Consensus 163 ~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~-~----~~~~l~~--~~~~~i~v~d~~~~~~~-~~~~----~ 228 (393)
.+++.++.||.|.-.|..+|+....++.. .+..... + ++..++. ..||.|..++..++... .+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47899999999999999999999999876 2222211 1 2234444 36899999998887543 1110 1
Q ss_pred CCcEEE---EEE-------eCCEEEEEeCCCcEEEEEeccCCcc
Q 016224 229 VGQVYA---MAV-------GNDLLFAGTQDGAILAWKFNVTTNC 262 (393)
Q Consensus 229 ~~~v~~---l~~-------~~~~l~~~~~dg~I~vwd~~~~~~~ 262 (393)
..++.. ..+ ..+.+++|+.+|.+...|+.++...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 122221 001 3348899999999999999988543
No 311
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.73 E-value=0.37 Score=44.80 Aligned_cols=231 Identities=10% Similarity=0.004 Sum_probs=119.2
Q ss_pred CEEEEEecCC--CCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEE--EEeCCCEEEEEcCC-----eEEEEECCCCce
Q 016224 152 VVSGITLPSG--SDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGC--MISEGPWIFIGVTN-----FVKAWNTQTNTD 222 (393)
Q Consensus 152 ~I~~i~~s~~--~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~-----~i~v~d~~~~~~ 222 (393)
....|+|+|+ ...|+.+...+.|+.+|..+++............. +.+++.++++...+ .+...+......
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 4568999984 45666665558999999988876655443333333 33567755554321 233333222211
Q ss_pred e-eecCCCCcEEEEEEeC-C--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCE-EEEecCCCcE
Q 016224 223 L-SLSGPVGQVYAMAVGN-D--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANK-LYSGSMDNSI 295 (393)
Q Consensus 223 ~-~~~~~~~~v~~l~~~~-~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~-l~sg~~dg~i 295 (393)
. ...........+++++ + ++++-..++.|+.+|..++... ..+..... ...-..++++ +++ +++-...+.|
T Consensus 220 ~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 220 ERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSC-CSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCC-CCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 0 1111223345677777 3 4444446678888887644210 00111111 1111235554 664 4555567889
Q ss_pred EEeeCC--Ccce--eeEeccC---------------ccceEEEEE---------c--CCEEEEEeCCCcEEEEEcCCCcc
Q 016224 296 RVWNLE--TLQC--IQTLTEH---------------TSVVMSLLC---------W--DQFLLSCSLDKTIKVWFATDSGN 345 (393)
Q Consensus 296 ~iwd~~--~~~~--~~~~~~~---------------~~~v~~l~~---------~--~~~l~s~s~dg~i~iwd~~~~~~ 345 (393)
+.++.. +++. ...+.+. -..-..+++ + +.++++-.....|+.++. ++ .
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G-~ 375 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG-R 375 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS-E
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC-C
Confidence 997765 3321 1222111 112356777 4 334555556678998875 33 3
Q ss_pred eEEEEeecC----------------CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 346 LEVTYTHNE----------------EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 346 ~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+..+..... -.....+++.|. ++.++++=...+.|+.++++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~--~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMK--RKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETT--TTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECC--CCEEEEEeCCCCEEEEEecC
Confidence 444433211 122556777632 33355555567788888765
No 312
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.67 E-value=0.051 Score=54.64 Aligned_cols=184 Identities=11% Similarity=0.058 Sum_probs=94.6
Q ss_pred EEE-eCCCEEEEEc--CC----eEEEEECCCC-ceeeecCCCCcEEEEEEeCC--EEEEEeCC-----CcEEEEEeccCC
Q 016224 196 CMI-SEGPWIFIGV--TN----FVKAWNTQTN-TDLSLSGPVGQVYAMAVGND--LLFAGTQD-----GAILAWKFNVTT 260 (393)
Q Consensus 196 ~~~-~~~~~l~~~~--~~----~i~v~d~~~~-~~~~~~~~~~~v~~l~~~~~--~l~~~~~d-----g~I~vwd~~~~~ 260 (393)
.+. +++++|+.+. +| .|+++|+.++ +.+.. ........+.|+++ .|+....+ ..|+++++.+..
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQ 258 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCG
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCc
Confidence 455 6888777542 22 5999999998 63210 00111346788887 45544444 257777776543
Q ss_pred ccccCceeecCceeeEEEEEE--cCCEEEEec---CCCcEEEeeCCCcc-ee--eEe-ccCccceEEEEEc-CCEEEEEe
Q 016224 261 NCFEPAASLKGHSLAVVSLVV--GANKLYSGS---MDNSIRVWNLETLQ-CI--QTL-TEHTSVVMSLLCW-DQFLLSCS 330 (393)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~l~~--~~~~l~sg~---~dg~i~iwd~~~~~-~~--~~~-~~~~~~v~~l~~~-~~~l~s~s 330 (393)
..-..+.... .......+.+ ++++|+..+ ....|.++|+.++. .. ..+ ........++.|. ++.|+..+
T Consensus 259 ~~~~lv~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t 337 (751)
T 2xe4_A 259 SEDVCLYEEH-NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILT 337 (751)
T ss_dssp GGCEEEEECC-CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEE
T ss_pred hhcEEEEecC-CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEe
Confidence 1111111111 1223344455 466665444 34578889998752 12 333 3344556677643 66554443
Q ss_pred -CC----CcEEEEEcCCCcceEE-EEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEE
Q 016224 331 -LD----KTIKVWFATDSGNLEV-TYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFY 385 (393)
Q Consensus 331 -~d----g~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iw 385 (393)
.+ ..|..+|+.+...... +..+.....+..+.+ + ++.++++...++..+||
T Consensus 338 ~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~--~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 338 NEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--R--SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp CTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--C--SSEEEEEEEETTEEEEE
T ss_pred CCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--E--CCEEEEEEEeCCEEEEE
Confidence 33 2566667654233333 344433333444443 3 33467777778865444
No 313
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.58 E-value=0.47 Score=44.07 Aligned_cols=229 Identities=9% Similarity=0.046 Sum_probs=120.5
Q ss_pred CEEEEEecC-CCCEEEEEeCCCcEEEEECCCCeEEEEEecCCceEEE--EeCCCEEEEEcC-----C-eEEEEECCCCce
Q 016224 152 VVSGITLPS-GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCM--ISEGPWIFIGVT-----N-FVKAWNTQTNTD 222 (393)
Q Consensus 152 ~I~~i~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~-----~-~i~v~d~~~~~~ 222 (393)
....|+++| ++..|+.+...+.|+.+|+.+++.............+ .++++.|++... . .+..++......
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 456889998 4666777766688999999887765555433333333 356775555422 1 344444332211
Q ss_pred --eeecCCCCcEEEEEEeC-C--EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCE-EEEecCCCc
Q 016224 223 --LSLSGPVGQVYAMAVGN-D--LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANK-LYSGSMDNS 294 (393)
Q Consensus 223 --~~~~~~~~~v~~l~~~~-~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~-l~sg~~dg~ 294 (393)
..+. .......+++++ + ++++-..++.|..++...... ..+..... ......++++ +++ +++-...+.
T Consensus 218 ~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~--~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 218 VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET--TPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--EEEEECSS-SSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--EEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCE
Confidence 1111 123456777888 4 555555678899998875421 01111111 1223455654 664 555556788
Q ss_pred EEEeeCCC--cce--eeEeccC----------------ccceEEEEEc----------CCEEEEEeCCCcEEEEEcCCCc
Q 016224 295 IRVWNLET--LQC--IQTLTEH----------------TSVVMSLLCW----------DQFLLSCSLDKTIKVWFATDSG 344 (393)
Q Consensus 295 i~iwd~~~--~~~--~~~~~~~----------------~~~v~~l~~~----------~~~l~s~s~dg~i~iwd~~~~~ 344 (393)
|..++... ++. +..+.+. ..+--.+... +.+.++-.....|+.++. ++
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G- 371 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QG- 371 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TS-
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CC-
Confidence 99987652 221 2222211 0111134432 234444445677888873 33
Q ss_pred ceEEEEeec-----C-----------CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 345 NLEVTYTHN-----E-----------EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 345 ~~~~~~~~~-----~-----------~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
.+..+.... . -.....+++.++ ++.++++-...+.|+.++++
T Consensus 372 ~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~--~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 372 RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEE--RECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETT--TTEEEEEEGGGTEEEEEEEC
T ss_pred cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECC--CCEEEEEECCCCeEEEEccC
Confidence 344433320 0 113567777663 23355555567788888764
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.53 E-value=0.0068 Score=60.42 Aligned_cols=221 Identities=10% Similarity=0.035 Sum_probs=117.1
Q ss_pred EEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEe-CCCcEEEEECCC----CeEEEEEec--CCce-
Q 016224 123 MYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGS-KDETVRVWDCAS----GQCAGVINL--GGEV- 194 (393)
Q Consensus 123 ~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~~----~~~~~~~~~--~~~~- 194 (393)
++-+..+.|++.++... +....+. ....+..|+|++.+..|+.+. ..+.|+.+++.. ......+.. ..+.
T Consensus 380 ll~~~~~~I~~id~~~~-~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 380 LFFTNRHEVRKMTLDRS-EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 457 (699)
T ss_dssp BCCCCTTC-CEECTTSC-CEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCC
T ss_pred EEecCccceEEEeCCCC-cceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcce
Confidence 33344567788887765 3433333 234566899998777776654 457899999875 222211111 1111
Q ss_pred EEEE-eCCCEEEEE-cCCeEEEEECCCCceeeecC-CCCcEEEEEEeCC--EEEEEe-C-CCcEEEEEeccCCccccCce
Q 016224 195 GCMI-SEGPWIFIG-VTNFVKAWNTQTNTDLSLSG-PVGQVYAMAVGND--LLFAGT-Q-DGAILAWKFNVTTNCFEPAA 267 (393)
Q Consensus 195 ~~~~-~~~~~l~~~-~~~~i~v~d~~~~~~~~~~~-~~~~v~~l~~~~~--~l~~~~-~-dg~I~vwd~~~~~~~~~~~~ 267 (393)
..+. ..+.++++. ..+.|.++++.......+.. .......|++++. .|+.+. . .+.|.++++..... + .
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~--~ 533 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--Y--S 533 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--C--E
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--e--E
Confidence 1222 233444443 45689999987765543332 2345677888764 444333 2 26787777654321 1 1
Q ss_pred eecCceeeEEEEEEc--C-CEEEEecCCCcEEEeeCCCcceeeEec--cCccceEEEEEcCCE-EEEEeCCCcEEEEEcC
Q 016224 268 SLKGHSLAVVSLVVG--A-NKLYSGSMDNSIRVWNLETLQCIQTLT--EHTSVVMSLLCWDQF-LLSCSLDKTIKVWFAT 341 (393)
Q Consensus 268 ~~~~~~~~v~~l~~~--~-~~l~sg~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~~-l~s~s~dg~i~iwd~~ 341 (393)
.....-.....|+++ + .++++-+..+.|..+|+........+. ........|++.++. +++....+.|..++..
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETT
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEcc
Confidence 111111223445665 3 355555667889999986433222222 111223455556554 4455566889999876
Q ss_pred CCcceEEE
Q 016224 342 DSGNLEVT 349 (393)
Q Consensus 342 ~~~~~~~~ 349 (393)
+++.+..+
T Consensus 614 ~G~~~~~i 621 (699)
T 1n7d_A 614 TGSDVNLL 621 (699)
T ss_dssp TEEEEECC
T ss_pred CCCceEEe
Confidence 66544433
No 315
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.36 E-value=0.86 Score=44.57 Aligned_cols=217 Identities=12% Similarity=0.076 Sum_probs=128.0
Q ss_pred cCCCeEEEEECCCCcEEEEEec-CCcCCEEEEEecCCCCEEEEE-eCCCcEEEEECCCCeEEEEEecC--Cce-EEEEeC
Q 016224 126 EKCKFLHSWTVGDGFKLLTQLE-GHQKVVSGITLPSGSDKLYSG-SKDETVRVWDCASGQCAGVINLG--GEV-GCMISE 200 (393)
Q Consensus 126 ~~dg~i~vwd~~~~~~~~~~l~-~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd~~~~~~~~~~~~~--~~~-~~~~~~ 200 (393)
+....|+..++++. .....+. ..-..+..|+|++.+..|+-+ ..++.|..++++.......+... .+. .++...
T Consensus 12 s~~~~I~~i~l~~~-~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~ 90 (628)
T 4a0p_A 12 SRRADIRRISLETN-NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL 90 (628)
T ss_dssp EETTEEEEEESSCT-TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred EeCCcEEEEECCCC-CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeC
Confidence 45677888888765 2222222 233568899999876666655 45788999998765444444322 222 222234
Q ss_pred CCEE-EEE-cCCeEEEEECCCCceeee-cCCCCcEEEEEEeCC--EEEEEeC--CCcEEEEEeccCCccccCceeecCce
Q 016224 201 GPWI-FIG-VTNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND--LLFAGTQ--DGAILAWKFNVTTNCFEPAASLKGHS 273 (393)
Q Consensus 201 ~~~l-~~~-~~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~--~l~~~~~--dg~I~vwd~~~~~~~~~~~~~~~~~~ 273 (393)
+..| ++. ..+.|.+.++.......+ .........|+++|. .|+.... .+.|...++..... ..+...-
T Consensus 91 ~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-----~~l~~~~ 165 (628)
T 4a0p_A 91 GKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-----TTLVPNV 165 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-----EEEECSC
T ss_pred CCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-----EEEECCC
Confidence 4444 444 456899999876654333 345567889999974 5555442 56777777665421 1111222
Q ss_pred eeEEEEEEc--CCEEE-EecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEEe-CCCcEEEEEcCCCcceEEE
Q 016224 274 LAVVSLVVG--ANKLY-SGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCS-LDKTIKVWFATDSGNLEVT 349 (393)
Q Consensus 274 ~~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~ 349 (393)
.....|+++ ++.|+ +-...+.|..+|+..... ..+.........+++.+..|+... ..+.|...|..+++....+
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEE
Confidence 344566665 45554 445667899999875433 333333334457777766555544 4788988887666554443
No 316
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.23 E-value=1 Score=44.05 Aligned_cols=216 Identities=13% Similarity=0.078 Sum_probs=113.4
Q ss_pred CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeC-CCcEEEEECCCCeE-EEEEecC-CceEEEE--eCC
Q 016224 127 KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSK-DETVRVWDCASGQC-AGVINLG-GEVGCMI--SEG 201 (393)
Q Consensus 127 ~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~-dg~v~iwd~~~~~~-~~~~~~~-~~~~~~~--~~~ 201 (393)
....|++.++.........+...-.....|+|++.+..|+-+.. .+.|..++++.... ...+... .....+. ..+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 34567777876541122222233456789999987777766554 57888898875532 2223222 2233332 334
Q ss_pred CEEEE-E-cCCeEEEEECCCCceeee-cCCCCcEEEEEEeCC--EEEEEeC--CCcEEEEEeccCCccccCceeecCcee
Q 016224 202 PWIFI-G-VTNFVKAWNTQTNTDLSL-SGPVGQVYAMAVGND--LLFAGTQ--DGAILAWKFNVTTNCFEPAASLKGHSL 274 (393)
Q Consensus 202 ~~l~~-~-~~~~i~v~d~~~~~~~~~-~~~~~~v~~l~~~~~--~l~~~~~--dg~I~vwd~~~~~~~~~~~~~~~~~~~ 274 (393)
..|+. . ..+.|.+.++.......+ .........|+++|. .|+.... .+.|...++..... .......-.
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~----~~l~~~~~~ 171 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR----FIIINSEIY 171 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EEEECSSCS
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce----EEEEeCCCC
Confidence 54444 4 456999999987654433 244556778999875 5554443 45666666654321 111111223
Q ss_pred eEEEEEEc--CCEEE-EecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEE-eCCCcEEEEEcCCCcce
Q 016224 275 AVVSLVVG--ANKLY-SGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSC-SLDKTIKVWFATDSGNL 346 (393)
Q Consensus 275 ~v~~l~~~--~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~-s~dg~i~iwd~~~~~~~ 346 (393)
....|+++ .+.|+ +-...+.|..+|+..................|++.++.|+.+ ...+.|...|..+++..
T Consensus 172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCC
T ss_pred CCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCccc
Confidence 34566665 44544 445567899999875333222221222224666676555544 45678888888766543
No 317
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.15 E-value=0.021 Score=56.91 Aligned_cols=212 Identities=11% Similarity=0.019 Sum_probs=107.1
Q ss_pred CCcEEEEECCCCeEEEEEecCCce--EEEEeCCCEEEEE--cCCeEEEEECCC----Ccee-eecCCCCcEEEEEEeC--
Q 016224 171 DETVRVWDCASGQCAGVINLGGEV--GCMISEGPWIFIG--VTNFVKAWNTQT----NTDL-SLSGPVGQVYAMAVGN-- 239 (393)
Q Consensus 171 dg~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~--~~~~i~v~d~~~----~~~~-~~~~~~~~v~~l~~~~-- 239 (393)
...|++.++.+.+....+.....+ ..+......|+.. ..+.|+.+++.. .... .+.........|++..
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 357788888776554443322222 2233445555554 456888888875 2222 2212223345667653
Q ss_pred C-EEEEEeCCCcEEEEEeccCCccccCceeecCceeeEEEEEEc--CCEEEEec-C-CCcEEEeeCCCcceeeEe-ccCc
Q 016224 240 D-LLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVG--ANKLYSGS-M-DNSIRVWNLETLQCIQTL-TEHT 313 (393)
Q Consensus 240 ~-~l~~~~~dg~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~sg~-~-dg~i~iwd~~~~~~~~~~-~~~~ 313 (393)
. ++++-...+.|.++++..... ...+.........|+++ +.+|+.+. . .+.|.++++.... ...+ ...-
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~----~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l 539 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKR----KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENI 539 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCE----EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSC
T ss_pred CcEEEEeccCCeEEEEecCCCce----EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCC
Confidence 2 455555678898888765421 11111111222345554 34444433 2 3788888875322 2222 2222
Q ss_pred cceEEEEEc---CCEEEEEeCCCcEEEEEcCCCcceEEEEee-cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 314 SVVMSLLCW---DQFLLSCSLDKTIKVWFATDSGNLEVTYTH-NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 314 ~~v~~l~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
..-..|+++ +.++++-+..+.|..+++... ....+... ........+++. . +.++++....+.|..++..+
T Consensus 540 ~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~P~glavd--~--~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF--E--DKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSSCCCCEEE--T--TEEEEECSTTTCEEEEETTT
T ss_pred CCccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCCceEeEEE--C--CEEEEEeCCCCeEEEEEccC
Confidence 334567776 345555566778999998643 33333221 111112233332 2 23566666678999999877
Q ss_pred eee
Q 016224 390 VII 392 (393)
Q Consensus 390 ~~l 392 (393)
++.
T Consensus 615 G~~ 617 (699)
T 1n7d_A 615 GSD 617 (699)
T ss_dssp EEE
T ss_pred CCc
Confidence 653
No 318
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.019 Score=51.37 Aligned_cols=184 Identities=9% Similarity=0.013 Sum_probs=100.5
Q ss_pred CcEEEecCCCeEEEEECCCCcEEEEEecCC-cCCEEEEEe--cCCCCEEEEE--eCCCcEEEEECCCCeEEEEEecCCc-
Q 016224 120 GNCMYGEKCKFLHSWTVGDGFKLLTQLEGH-QKVVSGITL--PSGSDKLYSG--SKDETVRVWDCASGQCAGVINLGGE- 193 (393)
Q Consensus 120 ~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h-~~~I~~i~~--s~~~~~l~s~--s~dg~v~iwd~~~~~~~~~~~~~~~- 193 (393)
+.+++++.||.|+-.|..+| +.+-+++.. ..++....- .+.+..++.+ ..||.|..++..+|.....+..+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNG-HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTT-EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCC-cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 35668999999999999999 777777643 123222111 1112234444 5899999999998866655543321
Q ss_pred ----eEE----EE-------eCCCEEEEEcCCeEEEEECCCCceeeecCCCCc--------EEEEE-------EeCCEEE
Q 016224 194 ----VGC----MI-------SEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQ--------VYAMA-------VGNDLLF 243 (393)
Q Consensus 194 ----~~~----~~-------~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~--------v~~l~-------~~~~~l~ 243 (393)
... +. .++.+++.+.++.+...|..+++.+-....... ..+.. ...+.++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 111 01 344444556888999999999998832222111 11111 1123666
Q ss_pred EEeCCCcEEEEEeccCCccccCce-eecCcee--eE---EEEEEcCCEEEEecCCCcEEEeeCCCcceee
Q 016224 244 AGTQDGAILAWKFNVTTNCFEPAA-SLKGHSL--AV---VSLVVGANKLYSGSMDNSIRVWNLETLQCIQ 307 (393)
Q Consensus 244 ~~~~dg~I~vwd~~~~~~~~~~~~-~~~~~~~--~v---~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 307 (393)
.+..+..+.+.+ +++. .+.... ....... .+ ..+..++.+ +.++.||.|..+|..+++.+.
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 666666666655 2221 111100 0000000 00 000012334 557889999999999988765
No 319
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.87 E-value=0.0043 Score=42.32 Aligned_cols=32 Identities=25% Similarity=0.623 Sum_probs=26.0
Q ss_pred cccccccceeeeecccccCC-CCCCcccccCCC
Q 016224 29 STADTRQKVCNYWRAGKCNR-FPCPYLHRELPL 60 (393)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~ 60 (393)
..+..+..+|.||++|.|.+ ..|+|+|...+.
T Consensus 4 ~~~~~k~~~C~~fl~G~C~~G~~C~fsH~~~~~ 36 (77)
T 2d9n_A 4 GSSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMT 36 (77)
T ss_dssp CCSCCTTSBCHHHHTTCCSCTTSSSSBCSCCTT
T ss_pred CCCCCcceeCHhHccCcCCCCCCCCCccccccC
Confidence 34467788999999999998 679999987643
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.86 E-value=0.9 Score=40.28 Aligned_cols=264 Identities=9% Similarity=0.049 Sum_probs=132.4
Q ss_pred ceEEeeEecC-cEEEecCCCeEEEEECCCC--cEEEEE-ecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEE
Q 016224 111 DILCRNWVQG-NCMYGEKCKFLHSWTVGDG--FKLLTQ-LEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAG 186 (393)
Q Consensus 111 ~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~--~~~~~~-l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 186 (393)
.+.++.+.+. ..++.+..+.|. ...+.+ ++.+.. .......+.+|.|.+ + .++.++.++.|.. ..+.|+.-.
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~DgG~tW~ 112 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDGGQSWS 112 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESSTTSSCE
T ss_pred cEEEEEECCCCcEEEEcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCCCCCce
Confidence 6778887644 455555677653 333333 222211 112345789999986 3 3444556665544 333343322
Q ss_pred EEec----CCceEEE--EeCCCEEEEEcCCeEEEEECCCCcee--eecCCCCcEEEEEEeCC-EEEEEeCCCcEEEEEec
Q 016224 187 VINL----GGEVGCM--ISEGPWIFIGVTNFVKAWNTQTNTDL--SLSGPVGQVYAMAVGND-LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 187 ~~~~----~~~~~~~--~~~~~~l~~~~~~~i~v~d~~~~~~~--~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~vwd~~ 257 (393)
.... +.....+ ..++.+++++.++.|.. ....++.. ........+..+.+.++ .+++.+.+|.+..-+ .
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~-d 190 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTW-E 190 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEE-C
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEe-C
Confidence 2221 1222222 24566666666665432 22233332 22344567888998876 444455566554432 1
Q ss_pred cCCccccCceeecCceeeEEEEEEcC-CEEEEecCCCcEEEeeCCCcceeeEecc----CccceEEEEEc-CCEEEEEeC
Q 016224 258 VTTNCFEPAASLKGHSLAVVSLVVGA-NKLYSGSMDNSIRVWNLETLQCIQTLTE----HTSVVMSLLCW-DQFLLSCSL 331 (393)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~l~~~-~~~l~s~s~ 331 (393)
.+...++.+. ......+..+.+.+ +.++..+.+|.+++.+...++.-..+.. +...+.++.+. +..++.++.
T Consensus 191 ~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 191 PGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp TTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 1111122221 12334566666642 3455666788887774332333222221 22357788876 334455556
Q ss_pred CCcEEEEEcCCCcceEEEEee-cCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 332 DKTIKVWFATDSGNLEVTYTH-NEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 332 dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
++.| ++....++....+... .....+..+.+..+. .++.++.+|.|.-++-
T Consensus 269 ~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~----~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 269 AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD----QGFILGQKGILLRYVT 320 (327)
T ss_dssp TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT----EEEEECSTTEEEEECC
T ss_pred CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC----ceEEEcCCceEEEEcC
Confidence 7776 3444445444433321 112345667665322 4677778998877653
No 321
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=95.83 E-value=0.0032 Score=42.26 Aligned_cols=29 Identities=28% Similarity=0.653 Sum_probs=24.1
Q ss_pred ccccceeeeecccccCC-CCCCcccccCCC
Q 016224 32 DTRQKVCNYWRAGKCNR-FPCPYLHRELPL 60 (393)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~ 60 (393)
..+..+|.||++|.|.+ ..|+|+|...+.
T Consensus 13 ~~k~~vCk~fl~G~C~~G~~C~fsH~~~~~ 42 (72)
T 2rhk_C 13 GEKTVVCKHWLRGLCKKGDQCEFLHEYDMT 42 (72)
T ss_dssp CCCCSBCHHHHTTCCCCGGGSSSBCSCCTT
T ss_pred CCcCeeCHHHhcCCCCCCCCCCCccccccc
Confidence 45678999999999999 679999986543
No 322
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.82 E-value=0.83 Score=39.63 Aligned_cols=221 Identities=15% Similarity=0.114 Sum_probs=121.8
Q ss_pred ceEEeeEecCcEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC-eEEEEEe
Q 016224 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-QCAGVIN 189 (393)
Q Consensus 111 ~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~-~~~~~~~ 189 (393)
.|..++.-....+.-. ||.|+.|-....-++- .-..-...|..|+..... .++. . ||.|..|-.... +.-....
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~ 99 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAE 99 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGG
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcc
Confidence 3444444444444445 8999999765321111 001123467777765443 3333 4 899999976542 2111111
Q ss_pred cCCceEEEEe-CCCEEEEEcCCeEEEEECCCCcee-eecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCce
Q 016224 190 LGGEVGCMIS-EGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAA 267 (393)
Q Consensus 190 ~~~~~~~~~~-~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~~ 267 (393)
....+..+.. ....++.. ++.|..|-....-.+ ........|..++...+..+.-. ||.|+.|-.........+.
T Consensus 100 ~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~- 176 (282)
T 3qhy_B 100 ARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPA- 176 (282)
T ss_dssp GSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCG-
T ss_pred cCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCce-
Confidence 1234444444 44445556 999999976553322 22223456888888777444444 7999999765432211111
Q ss_pred eecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEEeCCCcEEEEEcCCCc
Q 016224 268 SLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSG 344 (393)
Q Consensus 268 ~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~ 344 (393)
.-...|..++....+.+.- .||.|..|-....-.+-.-......|..++.-..+.+.-. ||.|..|-.....
T Consensus 177 ---~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~n~~g 248 (282)
T 3qhy_B 177 ---EAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAWGSSRTA 248 (282)
T ss_dssp ---GGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEESTTCCC
T ss_pred ---ecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEecCCCCc
Confidence 1134677888776654444 6999999976542211111112235777777655544444 9999999765443
No 323
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.79 E-value=1.3 Score=41.71 Aligned_cols=145 Identities=8% Similarity=0.032 Sum_probs=84.9
Q ss_pred eEEeeEec---CcEEEecC-CCeEEEEECCCCcEEEEEecCC---cCCEEEEEe-------cCCCCEEEEEeCCC-----
Q 016224 112 ILCRNWVQ---GNCMYGEK-CKFLHSWTVGDGFKLLTQLEGH---QKVVSGITL-------PSGSDKLYSGSKDE----- 172 (393)
Q Consensus 112 i~c~~~~~---~~~~~g~~-dg~i~vwd~~~~~~~~~~l~~h---~~~I~~i~~-------s~~~~~l~s~s~dg----- 172 (393)
-..+++.+ +.++.+.. .+.|++.|.+++ .+...+..- ......|+| ++++++|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 45677775 34444433 357888898886 444433322 235899999 99999777776654
Q ss_pred --cEEEEECCC-Ce--------EEEEEecCCceEEEEe-CCCEEEEE-cCCeEEEEECC-------CCce----------
Q 016224 173 --TVRVWDCAS-GQ--------CAGVINLGGEVGCMIS-EGPWIFIG-VTNFVKAWNTQ-------TNTD---------- 222 (393)
Q Consensus 173 --~v~iwd~~~-~~--------~~~~~~~~~~~~~~~~-~~~~l~~~-~~~~i~v~d~~-------~~~~---------- 222 (393)
.|.+.+... ++ .+..+.... -..+.+ ++.++++. ..+.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~-giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCN-GATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCC-CEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCce-EEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665443 12 222222222 223344 34555555 56689999987 4443
Q ss_pred ----eeecCCCCcEEEEEEeCC--E-EEEEeCCCcEEEEEecc
Q 016224 223 ----LSLSGPVGQVYAMAVGND--L-LFAGTQDGAILAWKFNV 258 (393)
Q Consensus 223 ----~~~~~~~~~v~~l~~~~~--~-l~~~~~dg~I~vwd~~~ 258 (393)
+...........|+++++ . +++-+....|+.++...
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 111223345678999987 3 45555677888877654
No 324
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.42 E-value=2.2 Score=41.72 Aligned_cols=192 Identities=10% Similarity=0.031 Sum_probs=112.8
Q ss_pred ceEEeeEec--CcEE-EecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE-eCCCcEEEEECCCCeEEE
Q 016224 111 DILCRNWVQ--GNCM-YGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG-SKDETVRVWDCASGQCAG 186 (393)
Q Consensus 111 ~i~c~~~~~--~~~~-~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd~~~~~~~~ 186 (393)
....++|.. +.++ +-..++.|+.++++.. .....+.........|++.+.+..|+.+ ...+.|.+.+++......
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~-~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGS-ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCC-CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 346677774 3344 3446788988888754 2233333233456788998765555444 456789999987543322
Q ss_pred EEe--cCCceE-EEEeCCCEEEEEc---CCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEec
Q 016224 187 VIN--LGGEVG-CMISEGPWIFIGV---TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 187 ~~~--~~~~~~-~~~~~~~~l~~~~---~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~ 257 (393)
.+. ...+.. .+.+....|+... ...|...++.......+.........|+++++ ++++-...+.|..+|+.
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 221 222222 2233445555442 45888888877665544445667889999875 44555567789999987
Q ss_pred cCCccccCceeecCceeeEEEEEEcCCEEEE-ecCCCcEEEeeCCCcceeeE
Q 016224 258 VTTNCFEPAASLKGHSLAVVSLVVGANKLYS-GSMDNSIRVWNLETLQCIQT 308 (393)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s-g~~dg~i~iwd~~~~~~~~~ 308 (393)
.... +. +.........+++.++.|+. -...+.|...|..+++....
T Consensus 197 G~~~--~v---~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 197 GLNR--EV---IADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp SCSC--EE---EEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCce--EE---eeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEE
Confidence 6432 21 22222233566666665554 44578899999776654433
No 325
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.32 E-value=1.4 Score=38.98 Aligned_cols=193 Identities=10% Similarity=0.070 Sum_probs=105.3
Q ss_pred CcCCEEEEEecCCCCEEEEEe-CCCcEEEEECCCCeEEEEEecCC---------ceEEE-E----eCCCEEEEEc-----
Q 016224 149 HQKVVSGITLPSGSDKLYSGS-KDETVRVWDCASGQCAGVINLGG---------EVGCM-I----SEGPWIFIGV----- 208 (393)
Q Consensus 149 h~~~I~~i~~s~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~-~----~~~~~l~~~~----- 208 (393)
...--.+++|++....|+.++ ..++|..||...+..... ..+. .+..+ . ++++++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 333344678987666666666 689999999986654443 3222 11222 2 3555666543
Q ss_pred ---------CCeEEEEECC---CCcee---eecC-----------CCCcEEEEEEeCC--EEEEEeCC-CcEEEEEeccC
Q 016224 209 ---------TNFVKAWNTQ---TNTDL---SLSG-----------PVGQVYAMAVGND--LLFAGTQD-GAILAWKFNVT 259 (393)
Q Consensus 209 ---------~~~i~v~d~~---~~~~~---~~~~-----------~~~~v~~l~~~~~--~l~~~~~d-g~I~vwd~~~~ 259 (393)
+..|..||+. +++.+ .+.. .......++..++ ..++++.. +.|...+....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 4679999999 66654 2211 1134788888887 66667777 77666554432
Q ss_pred Ccc-ccCceeecCceeeEEEEEE--cCCEEEEecCCCcEEEeeCCCcce--eeEec-cC------ccceEEEEEcCCE-E
Q 016224 260 TNC-FEPAASLKGHSLAVVSLVV--GANKLYSGSMDNSIRVWNLETLQC--IQTLT-EH------TSVVMSLLCWDQF-L 326 (393)
Q Consensus 260 ~~~-~~~~~~~~~~~~~v~~l~~--~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~-~~------~~~v~~l~~~~~~-l 326 (393)
... +...............|++ +++.|++....+.|..+|+.+... +..-. +. ...+..+...++. |
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vll 249 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVL 249 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEE
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEE
Confidence 110 0000000111112234444 577777776699999999885332 11100 11 1122233445776 5
Q ss_pred EEEeCCCcEEEEEcCC
Q 016224 327 LSCSLDKTIKVWFATD 342 (393)
Q Consensus 327 ~s~s~dg~i~iwd~~~ 342 (393)
++....+.+.+.+...
T Consensus 250 V~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 250 VGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEETTEEEEEECSST
T ss_pred EEcCCCCEEEEECCCC
Confidence 5555566666665544
No 326
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.85 E-value=3.6 Score=41.09 Aligned_cols=215 Identities=12% Similarity=0.162 Sum_probs=122.0
Q ss_pred ceEEeeEecC-cEEEecCCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q 016224 111 DILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVIN 189 (393)
Q Consensus 111 ~i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 189 (393)
.|.++....+ .+.+|+.+| +..||..+. +...........|.++... ++ .|..++.+ -|..+|..+++......
T Consensus 64 ~i~~i~~d~~g~lWigT~~G-l~~yd~~~~-~f~~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~~ 138 (758)
T 3ott_A 64 RIYCGVIIDNTYLYMGTDNG-ILVYNYRAD-RYEQPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLTSFDT 138 (758)
T ss_dssp CEEEEEEETTTEEEEEETTE-EEEEETTTT-EECCCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEEEECH
T ss_pred eEEEEEEcCCCcEEEEeCCC-eEEEeCCCC-EEECcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEEEecc
Confidence 5777765544 566787665 788998776 3322111123457777653 44 56667666 57889987765443211
Q ss_pred -----cCCceEEEEe--CCCEEEEEcCCeEEEEECCCCceeeecCC------CCcEEEEEEeCC--EEEEEeCCCcEEEE
Q 016224 190 -----LGGEVGCMIS--EGPWIFIGVTNFVKAWNTQTNTDLSLSGP------VGQVYAMAVGND--LLFAGTQDGAILAW 254 (393)
Q Consensus 190 -----~~~~~~~~~~--~~~~l~~~~~~~i~v~d~~~~~~~~~~~~------~~~v~~l~~~~~--~l~~~~~dg~I~vw 254 (393)
....+..+.. ++.+.+ +..+-+..++..+++...+... ...|.++....+ .|..|+. +-|..+
T Consensus 139 ~~~~l~~~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~ 216 (758)
T 3ott_A 139 RRNGLPNNTIYSIIRTKDNQIYV-GTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQY 216 (758)
T ss_dssp HHHCCSCSCEEEEEECTTCCEEE-EETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEE
T ss_pred CCCCcCCCeEEEEEEcCCCCEEE-EeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEE
Confidence 1233455543 444444 4455688888877664422211 234888888753 5666664 457788
Q ss_pred EeccCCccccCceeecCceeeEEEEEEc-CCEEEEecCCCcEEEeeCCCcceeeEecc--------CccceEEEEEc-CC
Q 016224 255 KFNVTTNCFEPAASLKGHSLAVVSLVVG-ANKLYSGSMDNSIRVWNLETLQCIQTLTE--------HTSVVMSLLCW-DQ 324 (393)
Q Consensus 255 d~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~--------~~~~v~~l~~~-~~ 324 (393)
|..+... .....+ ....|.++..+ ...|..|+.+ -+.++|..+.+.. .+.. ....|.++..+ ..
T Consensus 217 ~~~~~~~--~~~~~l--~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g 290 (758)
T 3ott_A 217 FPSTGQI--KQTEAF--HNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEH 290 (758)
T ss_dssp ETTTTEE--EEEEEE--EEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTC
T ss_pred cCCCCeE--EeccCC--CCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCC
Confidence 8665421 111111 23457777776 3456666654 5888888765432 2211 22357888777 33
Q ss_pred EEEEEeCCCcEEEEE
Q 016224 325 FLLSCSLDKTIKVWF 339 (393)
Q Consensus 325 ~l~s~s~dg~i~iwd 339 (393)
.|..|+..| +.++.
T Consensus 291 ~lWiGT~~G-l~~~~ 304 (758)
T 3ott_A 291 NIWLGTDYG-ISLSR 304 (758)
T ss_dssp CEEEEESSS-EEEEC
T ss_pred CEEEEeCCc-ccccc
Confidence 566666666 55543
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.84 E-value=2 Score=38.23 Aligned_cols=136 Identities=14% Similarity=0.013 Sum_probs=67.7
Q ss_pred CcEEEEECCCCeEEEEEecCC---c-eEEEEeCCCEEEEEc-------CCeEEEEEC--CCCceeeecCC---CCc-EEE
Q 016224 172 ETVRVWDCASGQCAGVINLGG---E-VGCMISEGPWIFIGV-------TNFVKAWNT--QTNTDLSLSGP---VGQ-VYA 234 (393)
Q Consensus 172 g~v~iwd~~~~~~~~~~~~~~---~-~~~~~~~~~~l~~~~-------~~~i~v~d~--~~~~~~~~~~~---~~~-v~~ 234 (393)
..+.+||..+.+-...-..+. . ......++++++.|. ...+..||+ .+.+-..+... ... -.+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccce
Confidence 478999998876444333221 1 233444666666542 346777887 44443322221 111 112
Q ss_pred EEEeCC-EEEEEeCC----------------------CcEEEEEeccCCccccCceeecCceeeEEEEEEcCCEEEEecC
Q 016224 235 MAVGND-LLFAGTQD----------------------GAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSM 291 (393)
Q Consensus 235 l~~~~~-~l~~~~~d----------------------g~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~sg~~ 291 (393)
+....+ +++.|+.+ ..+.+||+.+.. +..+..+......-.++..++.+++.|+.
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK--WDKSGELSQGRAYGVSLPWNNSLLIIGGE 325 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEEEEETTEEEEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc--eeeCCCCCCCcccceeEEeCCEEEEEeee
Confidence 333344 66666632 246788877543 33333332222222345567777888885
Q ss_pred CC------cEEEeeCCCcceeeEe
Q 016224 292 DN------SIRVWNLETLQCIQTL 309 (393)
Q Consensus 292 dg------~i~iwd~~~~~~~~~~ 309 (393)
++ .|.++++++++.+...
T Consensus 326 ~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 326 TAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred CCCCCEeeeEEEEEEcCcEeEeee
Confidence 43 3556688777765544
No 328
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.33 E-value=4.2 Score=39.62 Aligned_cols=191 Identities=11% Similarity=0.067 Sum_probs=104.8
Q ss_pred eEEeeEec--CcEEEec-CCCeEEEEECCCCcEEEEEecCCcCCEEEEEecCCCCEEEEE-eCCCcEEEEECCCCeEEEE
Q 016224 112 ILCRNWVQ--GNCMYGE-KCKFLHSWTVGDGFKLLTQLEGHQKVVSGITLPSGSDKLYSG-SKDETVRVWDCASGQCAGV 187 (393)
Q Consensus 112 i~c~~~~~--~~~~~g~-~dg~i~vwd~~~~~~~~~~l~~h~~~I~~i~~s~~~~~l~s~-s~dg~v~iwd~~~~~~~~~ 187 (393)
...++|.. +.++.+. ..+.|..++.+........+...-.....|++.+.+..|+.+ ...+.|.+.+++.......
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l 121 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL 121 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEE
Confidence 45667764 3344333 457888888765411223344333678899999866555554 5578999999875543333
Q ss_pred Ee--cCCc-eEEEEeCCCEEEE-Ec--CCeEEEEECCCCceee-ecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEec
Q 016224 188 IN--LGGE-VGCMISEGPWIFI-GV--TNFVKAWNTQTNTDLS-LSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFN 257 (393)
Q Consensus 188 ~~--~~~~-~~~~~~~~~~l~~-~~--~~~i~v~d~~~~~~~~-~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~ 257 (393)
+. ...+ -..+.+.+..|+. .. ...|...++....... ..........|+++++ ++++-...+.|..+|+.
T Consensus 122 ~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 122 FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 31 1222 2333444444544 32 3577777776554432 2334567889999864 44454566788888876
Q ss_pred cCCccccCceeecCceeeEEEEEEcCCEEE-EecCCCcEEEeeCCCccee
Q 016224 258 VTTNCFEPAASLKGHSLAVVSLVVGANKLY-SGSMDNSIRVWNLETLQCI 306 (393)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~-sg~~dg~i~iwd~~~~~~~ 306 (393)
..... ........|. ..|++.++.|+ +-...+.|...|..+++..
T Consensus 202 G~~~~-~~~~~~~~~P---~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 202 GTNRQ-AVVKGSLPHP---FALTLFEDILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp CCEEC----------C---CCEEESSSEEEEECTTTCSEEEEESSSCCCC
T ss_pred CCccE-EEEeCCCCCc---eEEEEeCCEEEEecCCCCEEEEEECCCCccc
Confidence 53221 1111011222 35566666554 4446778999998776543
No 329
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.15 E-value=3.9 Score=38.53 Aligned_cols=232 Identities=8% Similarity=0.070 Sum_probs=122.4
Q ss_pred CEEEEEecC-CCCEEEEEeC-CCcEEEEECCCCeEEEEEecCC----ceE--EE-------EeCCCEEEEE-cCC-----
Q 016224 152 VVSGITLPS-GSDKLYSGSK-DETVRVWDCASGQCAGVINLGG----EVG--CM-------ISEGPWIFIG-VTN----- 210 (393)
Q Consensus 152 ~I~~i~~s~-~~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~----~~~--~~-------~~~~~~l~~~-~~~----- 210 (393)
....|+|+| +...|+.+.. .+.|++.|+.++.......... ... .+ ..++..|++. ..+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356899998 3555555544 4679999998887776665432 222 33 4477755554 222
Q ss_pred --eEEEEECCC-Cce------eeecCCCCcEEEEEEeCC---EEEEEeCCCcEEEEEec-------cCCcc---------
Q 016224 211 --FVKAWNTQT-NTD------LSLSGPVGQVYAMAVGND---LLFAGTQDGAILAWKFN-------VTTNC--------- 262 (393)
Q Consensus 211 --~i~v~d~~~-~~~------~~~~~~~~~v~~l~~~~~---~l~~~~~dg~I~vwd~~-------~~~~~--------- 262 (393)
.|.+++... +.. ..+. .-.....++++++ ++++-..++.|..+|+. ++...
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665443 111 1111 1123456777874 56666678889999997 33210
Q ss_pred -ccCceeecCceeeEEEEEEc--CCE-EEEecCCCcEEEeeC--CCcce--eeEeccC---c------------cceE-E
Q 016224 263 -FEPAASLKGHSLAVVSLVVG--ANK-LYSGSMDNSIRVWNL--ETLQC--IQTLTEH---T------------SVVM-S 318 (393)
Q Consensus 263 -~~~~~~~~~~~~~v~~l~~~--~~~-l~sg~~dg~i~iwd~--~~~~~--~~~~~~~---~------------~~v~-~ 318 (393)
.+.+... ........++++ +++ +++-+..+.|+.+|. .++.. ..++-+. . ..-. .
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 0011111 112223456665 664 444456778888654 33322 1222111 0 0112 3
Q ss_pred EEEc---------CCEEEEEeCCCcEEEEEcCCCcceEEEEeecC----------------------CccEEEEEeeeCC
Q 016224 319 LLCW---------DQFLLSCSLDKTIKVWFATDSGNLEVTYTHNE----------------------EHGVLALCGMPDS 367 (393)
Q Consensus 319 l~~~---------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----------------------~~~v~~~~~~~~~ 367 (393)
+... +.++++=.....|+.++. ++ .+..+.+... -.....+++.++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~- 454 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV- 454 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT-
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC-
Confidence 3332 345555566788999884 33 4444443210 023456666654
Q ss_pred CCCcEEEEEeCCCeEEEEeCCc
Q 016224 368 EGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 368 ~~~~~l~s~s~dg~I~iwd~~s 389 (393)
++.++++=.....|+.++++.
T Consensus 455 -~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 455 -KEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp -TTEEEEEETTTTEEEEEEECC
T ss_pred -CCEEEEEeCCCCEEEEEECCC
Confidence 133555555678899988764
No 330
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=94.12 E-value=0.012 Score=39.17 Aligned_cols=25 Identities=32% Similarity=0.764 Sum_probs=20.3
Q ss_pred cccceeeeecccccCCCCCCccccc
Q 016224 33 TRQKVCNYWRAGKCNRFPCPYLHRE 57 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (393)
.+..+|.+|..|+|.|-.|+|+|..
T Consensus 40 ~~~~vC~~flkG~C~r~~C~y~H~~ 64 (70)
T 3d2q_A 40 NTVTVCMDYIKGRCSREKCKYFHPP 64 (70)
T ss_dssp TEEEBCHHHHTTCCCCTTCCSBCCC
T ss_pred CcceeccccCcCCCCCCCcCeeCCH
Confidence 3456799999999999999999853
No 331
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=93.25 E-value=0.019 Score=39.57 Aligned_cols=25 Identities=36% Similarity=0.650 Sum_probs=22.0
Q ss_pred cccceeeeecccccCCCCCCccccc
Q 016224 33 TRQKVCNYWRAGKCNRFPCPYLHRE 57 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (393)
...-+|++|..|+|.|.+|+|+|..
T Consensus 41 ~~~~vC~dflkG~C~r~~C~y~H~~ 65 (83)
T 3d2n_A 41 GRVIACFDSLKGRCSRENCKYLHPP 65 (83)
T ss_dssp TEEECCHHHHTTCCCCSSCSSCCCC
T ss_pred CceeehhHhhhccccCCCcceeCCh
Confidence 3467999999999999999999964
No 332
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.23 E-value=0.019 Score=41.00 Aligned_cols=25 Identities=32% Similarity=0.723 Sum_probs=17.9
Q ss_pred cccceeeeecccccCCCCCCccccc
Q 016224 33 TRQKVCNYWRAGKCNRFPCPYLHRE 57 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (393)
.+..+|.+|..|+|.|-.|+|+|..
T Consensus 54 ~~~~vC~~flkG~C~r~~C~y~H~~ 78 (98)
T 2e5s_A 54 NTVTVCMDYIKGRCMREKCKYFHPP 78 (98)
T ss_dssp CEEEBCHHHHHTCCCCTTCCSBCCC
T ss_pred CccccchhhccCCCCCCCcCccCCh
Confidence 4556777777777777777777743
No 333
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=93.11 E-value=0.019 Score=40.09 Aligned_cols=24 Identities=38% Similarity=0.692 Sum_probs=21.6
Q ss_pred ccceeeeecccccCCCCCCccccc
Q 016224 34 RQKVCNYWRAGKCNRFPCPYLHRE 57 (393)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~ 57 (393)
+.-+|++|..|+|+|.+|+|+|..
T Consensus 50 ~~~vC~dflkG~C~r~~Cky~H~~ 73 (89)
T 2rpp_A 50 RVIACFDSLKGRCSRENCKYLHPP 73 (89)
T ss_dssp BEEBCHHHHHTCCCCTTCCSBCCC
T ss_pred ceeeehhhhhCcCCCCCcceecCH
Confidence 567999999999999999999964
No 334
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.89 E-value=5.6 Score=36.52 Aligned_cols=134 Identities=10% Similarity=0.140 Sum_probs=81.5
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEecCC-----ce--EEEEeCCCEEEEEcCCeEEEEECCCCce-----------
Q 016224 161 GSDKLYSGSKDETVRVWDCASGQCAGVINLGG-----EV--GCMISEGPWIFIGVTNFVKAWNTQTNTD----------- 222 (393)
Q Consensus 161 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~~--~~~~~~~~~l~~~~~~~i~v~d~~~~~~----------- 222 (393)
++..|+.+- ++.||.-++.....-+.+..+. .+ ..+.++|.+|+...+..|.|..+..+..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccc
Confidence 444444432 3566666665433344444431 12 3344688888888888888888773321
Q ss_pred ----eeec----CCCCcEEEEEEeCC-----EEEEEeCCCcEEEEEeccCCccccCceee---------cCceeeEEEEE
Q 016224 223 ----LSLS----GPVGQVYAMAVGND-----LLFAGTQDGAILAWKFNVTTNCFEPAASL---------KGHSLAVVSLV 280 (393)
Q Consensus 223 ----~~~~----~~~~~v~~l~~~~~-----~l~~~~~dg~I~vwd~~~~~~~~~~~~~~---------~~~~~~v~~l~ 280 (393)
..+. ....+|..+.|+|- .|++-..|+.|++||+..... ++. .+ ......|.+++
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~--~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQE--KPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTS--CCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCC--CCc-chhccccccCCCcccceEEEEE
Confidence 1111 13567999999985 899999999999999987432 222 11 12235678888
Q ss_pred EcCC----EEEEecCCCcEEEe
Q 016224 281 VGAN----KLYSGSMDNSIRVW 298 (393)
Q Consensus 281 ~~~~----~l~sg~~dg~i~iw 298 (393)
|.++ ++++.+..|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 8754 34445577888654
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.72 E-value=8.3 Score=38.09 Aligned_cols=188 Identities=12% Similarity=0.070 Sum_probs=94.4
Q ss_pred eCCCEEEEEc-----CCeEEEEECCCCceeeec-C--------CCCcEEEEEEe-CC-EEEEEeCCC------cEEEEEe
Q 016224 199 SEGPWIFIGV-----TNFVKAWNTQTNTDLSLS-G--------PVGQVYAMAVG-ND-LLFAGTQDG------AILAWKF 256 (393)
Q Consensus 199 ~~~~~l~~~~-----~~~i~v~d~~~~~~~~~~-~--------~~~~v~~l~~~-~~-~l~~~~~dg------~I~vwd~ 256 (393)
.++.+++.|. .+.+.+||..+++-..+. . ....-..+.+. .+ +++.|+.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4555555542 236888888887655333 1 11223344442 44 666666443 4677777
Q ss_pred ccCCccccCceeecCceeeEEEEEE-cCCEEEEecCCC--cEEEeeCCCcceeeE-----eccCccceEEEEEc---CCE
Q 016224 257 NVTTNCFEPAASLKGHSLAVVSLVV-GANKLYSGSMDN--SIRVWNLETLQCIQT-----LTEHTSVVMSLLCW---DQF 325 (393)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~l~sg~~dg--~i~iwd~~~~~~~~~-----~~~~~~~v~~l~~~---~~~ 325 (393)
.+.. +.....+......-.+..+ ++.+++.|+.++ .+.+||+.+.+-... +........++.+. +.+
T Consensus 476 ~t~~--W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTRE--WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTE--EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCc--EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 6542 2222222211122233343 677778877654 799999987543221 11111122334445 456
Q ss_pred EEEEeC--C-----CcEEEEEcCCCcc-----eEEEEeec-CCccEEEEEeeeCCCCCcEEEEEeC--------CCeEEE
Q 016224 326 LLSCSL--D-----KTIKVWFATDSGN-----LEVTYTHN-EEHGVLALCGMPDSEGKPVLLCSCN--------DNSVRF 384 (393)
Q Consensus 326 l~s~s~--d-----g~i~iwd~~~~~~-----~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~s~s~--------dg~I~i 384 (393)
++.|+. + ..+.+||+.+..- ...+.... ....-.+++...+ +.+++.|+. ...|.+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP---RKLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET---TEEEEECCBCSSCCCCTTTSEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC---CEEEEECCccCCCCCCCCCeEEE
Confidence 677765 2 4588999977651 23332211 1101111222211 336777764 345899
Q ss_pred EeCCcee
Q 016224 385 YDLPSVI 391 (393)
Q Consensus 385 wd~~s~~ 391 (393)
||+.+.+
T Consensus 631 yd~~t~~ 637 (695)
T 2zwa_A 631 LDPLSET 637 (695)
T ss_dssp EETTTTE
T ss_pred EECCCCe
Confidence 9987653
No 336
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=92.51 E-value=0.037 Score=38.09 Aligned_cols=27 Identities=26% Similarity=0.586 Sum_probs=22.8
Q ss_pred ccccceeeeecccccCCC--CCCcccccC
Q 016224 32 DTRQKVCNYWRAGKCNRF--PCPYLHREL 58 (393)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 58 (393)
...--+|++|.+|+|+|- .|+|.|..-
T Consensus 6 ~~~~~VCr~FlrG~C~r~d~~C~f~H~~~ 34 (83)
T 3d2n_A 6 WLTLEVCREFQRGTCSRPDTECKFAHPSK 34 (83)
T ss_dssp GGEEEBCTTGGGTCCCSCTTTCSSBCCCT
T ss_pred cccchhcHHHhcCCCCCCCCCCCCcCCCc
Confidence 345569999999999998 899999763
No 337
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.46 E-value=6.4 Score=36.13 Aligned_cols=141 Identities=13% Similarity=0.137 Sum_probs=87.9
Q ss_pred EEEeCCCEEEEEcCCeEEEEECCCCcee-eecCC----CCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCcccc----
Q 016224 196 CMISEGPWIFIGVTNFVKAWNTQTNTDL-SLSGP----VGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFE---- 264 (393)
Q Consensus 196 ~~~~~~~~l~~~~~~~i~v~d~~~~~~~-~~~~~----~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~---- 264 (393)
.+..++.-++...++.||.-++...... .+... -..|..+..+|+ +|+.. .+..|.|..+..+.....
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHH
T ss_pred EEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCccccc
Confidence 3445777788888888998887744322 22222 336778999888 55554 566888888873321101
Q ss_pred --Cc--eeecC------ceeeEEEEEEc-----CCEEEEecCCCcEEEeeCCCc--ceeeEec---------cCccceEE
Q 016224 265 --PA--ASLKG------HSLAVVSLVVG-----ANKLYSGSMDNSIRVWNLETL--QCIQTLT---------EHTSVVMS 318 (393)
Q Consensus 265 --~~--~~~~~------~~~~v~~l~~~-----~~~l~sg~~dg~i~iwd~~~~--~~~~~~~---------~~~~~v~~ 318 (393)
.. ..+.- ....|..+.|+ +..|++-..|+.|++||+... ++. .+. .....|.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 00 11111 24678899996 458999999999999999752 122 222 22356788
Q ss_pred EEEcCC----EEEEEeCCCcEEEE
Q 016224 319 LLCWDQ----FLLSCSLDKTIKVW 338 (393)
Q Consensus 319 l~~~~~----~l~s~s~dg~i~iw 338 (393)
++|.+. |+++.+..|.|+-.
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCEEEE
Confidence 888833 45555677888654
No 338
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=92.22 E-value=6.5 Score=35.63 Aligned_cols=233 Identities=16% Similarity=0.169 Sum_probs=131.1
Q ss_pred eEEeeEecCcEEEecCCCeEEEEECCCC----------cEEEEEecC-CcCCEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 016224 112 ILCRNWVQGNCMYGEKCKFLHSWTVGDG----------FKLLTQLEG-HQKVVSGITLPSGSDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 112 i~c~~~~~~~~~~g~~dg~i~vwd~~~~----------~~~~~~l~~-h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~ 180 (393)
+..++--....+.-..||.|+.|-.... ......+.. ....+..++++....+.+.-..||.|..|-..
T Consensus 55 i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n 134 (389)
T 3kci_A 55 PVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 134 (389)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECC
T ss_pred eEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCC
Confidence 4444444556666778999999964321 011122221 23345666776666777777889999999653
Q ss_pred CC---------eE--EEEEec-C-CceEEEEeCC-CEEEEEcCCeEEEEECCCCc---------ee---eec-CCCCcEE
Q 016224 181 SG---------QC--AGVINL-G-GEVGCMISEG-PWIFIGVTNFVKAWNTQTNT---------DL---SLS-GPVGQVY 233 (393)
Q Consensus 181 ~~---------~~--~~~~~~-~-~~~~~~~~~~-~~l~~~~~~~i~v~d~~~~~---------~~---~~~-~~~~~v~ 233 (393)
.. .. ...+.. . ..+..+.... ..++...++.|..|-....- .. ... .....|.
T Consensus 135 ~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 135 EDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred CCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence 21 11 111111 1 2344555433 34555688899999753311 11 111 1234577
Q ss_pred EEEEeC--CEEEEEeCCCcEEEEEeccCCcc--------ccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCc
Q 016224 234 AMAVGN--DLLFAGTQDGAILAWKFNVTTNC--------FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETL 303 (393)
Q Consensus 234 ~l~~~~--~~l~~~~~dg~I~vwd~~~~~~~--------~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~ 303 (393)
.++... ...++-..||.|+.|=....... ..+..........|..++....+.++-..||.|..|-....
T Consensus 215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~ 294 (389)
T 3kci_A 215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 294 (389)
T ss_dssp EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGG
T ss_pred EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCC
Confidence 777754 46666788999999965432110 00100000112247777777777777788999999965421
Q ss_pred -c----------eeeEecc-CccceEEEEEcCCEEEEEeCCCcEEEEEcCCCc
Q 016224 304 -Q----------CIQTLTE-HTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSG 344 (393)
Q Consensus 304 -~----------~~~~~~~-~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~ 344 (393)
+ ....+.. ....|..|+.-..+.+....||.|..|-.....
T Consensus 295 GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~G 347 (389)
T 3kci_A 295 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEG 347 (389)
T ss_dssp GTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTTS
T ss_pred CCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCCC
Confidence 1 0111111 224577887777777777899999999765443
No 339
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.01 E-value=0.044 Score=39.12 Aligned_cols=27 Identities=26% Similarity=0.646 Sum_probs=22.5
Q ss_pred ccccceeeeecccccCCC--CCCcccccC
Q 016224 32 DTRQKVCNYWRAGKCNRF--PCPYLHREL 58 (393)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 58 (393)
..+..+|.+|+.|+|+|- .|+|.|..-
T Consensus 17 ~~k~~VCr~FlrG~C~rgd~~C~FsH~~~ 45 (98)
T 2e5s_A 17 TDKLEVCREFQRGNCARGETDCRFAHPAD 45 (98)
T ss_dssp SSEEEBCSHHHHTCCSSHHHHCSSBCCSS
T ss_pred hhhhhhhHHHhcCcCCCCCCCCCCcCCch
Confidence 344569999999999996 699999864
No 340
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=91.39 E-value=0.072 Score=35.59 Aligned_cols=27 Identities=30% Similarity=0.857 Sum_probs=23.2
Q ss_pred cccceeeeecc-cccCCCCCCcccccCC
Q 016224 33 TRQKVCNYWRA-GKCNRFPCPYLHRELP 59 (393)
Q Consensus 33 ~~~~~~~~~~~-~~~~~~~~~~~~~~~p 59 (393)
.+..+|.||.. |.|.+..|+|+|...+
T Consensus 42 ~~~~~C~~f~~~G~C~~~~C~y~H~~p~ 69 (72)
T 2rhk_C 42 TKMSECYFYSKFGECSNKECPFLHIDPE 69 (72)
T ss_dssp TSCCBCHHHHHHSCCSBTTCCSBCCCCC
T ss_pred ccCCcccccCCCCCCCCCCeeccCCCcc
Confidence 45678999999 9999988999998754
No 341
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=91.39 E-value=0.046 Score=36.37 Aligned_cols=24 Identities=38% Similarity=0.873 Sum_probs=20.8
Q ss_pred ccceeeeecccccCCC--CCCccccc
Q 016224 34 RQKVCNYWRAGKCNRF--PCPYLHRE 57 (393)
Q Consensus 34 ~~~~~~~~~~~~~~~~--~~~~~~~~ 57 (393)
+..+|.+|..|.|+|- .|+|.|..
T Consensus 5 k~~vC~~f~~G~C~rg~~~C~f~H~~ 30 (70)
T 3d2q_A 5 RLEVCREYQRGNCNRGENDCRFAHPA 30 (70)
T ss_dssp EEEBCHHHHTTCCSSCTTTCSSBCCC
T ss_pred cchhCHHHhcCCCCCCCCCCCCccCc
Confidence 4569999999999997 69999965
No 342
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=91.23 E-value=8.8 Score=35.15 Aligned_cols=190 Identities=11% Similarity=0.049 Sum_probs=103.8
Q ss_pred ceEEEEeC-CCEEEEEcCCeEEEEECCCCce-------------eeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEe--
Q 016224 193 EVGCMISE-GPWIFIGVTNFVKAWNTQTNTD-------------LSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKF-- 256 (393)
Q Consensus 193 ~~~~~~~~-~~~l~~~~~~~i~v~d~~~~~~-------------~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~-- 256 (393)
.+..+... ...++...++.|..|-....-. .........|..++......++-..||.|+.|-.
T Consensus 76 ~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v~~wG~~~ 155 (423)
T 3mvd_K 76 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFR 155 (423)
T ss_dssp SEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSSEEEEEETTSCEEEEECEE
T ss_pred CceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeEEEEeCCC
Confidence 34444443 3445556888999986533111 1112234568888888887777789999999975
Q ss_pred ccCCcc------ccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCc-c----------------------eee
Q 016224 257 NVTTNC------FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETL-Q----------------------CIQ 307 (393)
Q Consensus 257 ~~~~~~------~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~-~----------------------~~~ 307 (393)
...... .............|..++....+.++-..||.|+.|-.... + +..
T Consensus 156 n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~ 235 (423)
T 3mvd_K 156 DSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQ 235 (423)
T ss_dssp CSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEE
T ss_pred CCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeE
Confidence 211100 00000111123457788887778777788999999954321 1 111
Q ss_pred EeccCccceEEEEEcCCEEEEE-eCCCcEEEEEcCCCcce---------EEEEeecCCccEEEEEeeeCCCCCcEEEEEe
Q 016224 308 TLTEHTSVVMSLLCWDQFLLSC-SLDKTIKVWFATDSGNL---------EVTYTHNEEHGVLALCGMPDSEGKPVLLCSC 377 (393)
Q Consensus 308 ~~~~~~~~v~~l~~~~~~l~s~-s~dg~i~iwd~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s 377 (393)
........|..+.......+.. ..|+.|..|-.....++ ...........+..++.- ....+.-.
T Consensus 236 v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G-----~~ht~alt 310 (423)
T 3mvd_K 236 LIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG-----QHHTVILT 310 (423)
T ss_dssp ECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC-----SSEEEEEE
T ss_pred EeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc-----cCeEEEEe
Confidence 1111233566666665554444 68999999965432111 001111112245555432 22455556
Q ss_pred CCCeEEEEeC
Q 016224 378 NDNSVRFYDL 387 (393)
Q Consensus 378 ~dg~I~iwd~ 387 (393)
.||.|+.|--
T Consensus 311 ~~G~v~~wG~ 320 (423)
T 3mvd_K 311 TDLKCSVVGR 320 (423)
T ss_dssp TTCCEEEEEC
T ss_pred CCCcEEEEEC
Confidence 7899998854
No 343
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=90.88 E-value=9.3 Score=34.83 Aligned_cols=270 Identities=14% Similarity=0.152 Sum_probs=147.0
Q ss_pred ceEEeeEecCcEEEecCCCeEEEEECCCC----------cEEEEEecC-CcCCEEEEEecCCCCEEEEEeCC-CcEEEEE
Q 016224 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDG----------FKLLTQLEG-HQKVVSGITLPSGSDKLYSGSKD-ETVRVWD 178 (393)
Q Consensus 111 ~i~c~~~~~~~~~~g~~dg~i~vwd~~~~----------~~~~~~l~~-h~~~I~~i~~s~~~~~l~s~s~d-g~v~iwd 178 (393)
.|..++.-....++-..+|.|+.|=.... ......+.. ....|..|+.-.+ +.+.-..| +.|..|-
T Consensus 17 ~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~--ht~al~~~gg~v~~wG 94 (406)
T 4d9s_A 17 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGAD--HTVAYSQSGMEVYSWG 94 (406)
T ss_dssp CEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS--EEEEEETTTTEEEEEE
T ss_pred ceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcc--eEEEEECCCCEEEEEc
Confidence 55556655666667778899999964421 011122221 2346777776433 33333445 4899995
Q ss_pred CCCC---------eEEEEEec----CCceEEEEeCC-CEEEEEcCCeEEEEECCCCce----------e--eecC-CCCc
Q 016224 179 CASG---------QCAGVINL----GGEVGCMISEG-PWIFIGVTNFVKAWNTQTNTD----------L--SLSG-PVGQ 231 (393)
Q Consensus 179 ~~~~---------~~~~~~~~----~~~~~~~~~~~-~~l~~~~~~~i~v~d~~~~~~----------~--~~~~-~~~~ 231 (393)
.... ........ ...+..+.... ..++...++.|+.|-....-. . .+.. ....
T Consensus 95 ~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~ 174 (406)
T 4d9s_A 95 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR 174 (406)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCC
T ss_pred CCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCc
Confidence 4321 11111111 12345555443 445556889999997543211 1 1111 1236
Q ss_pred EEEEEEeCCEEEEEeCCCcEEEEEeccCCcc--------ccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCCc
Q 016224 232 VYAMAVGNDLLFAGTQDGAILAWKFNVTTNC--------FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETL 303 (393)
Q Consensus 232 v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~--------~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~~ 303 (393)
|..++...+..++-..+|.|+.|-....... ..+..........|..++....+.+.-..+|.|+.|-....
T Consensus 175 i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~ 254 (406)
T 4d9s_A 175 IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 254 (406)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEEECCTT
T ss_pred EEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCCcEEEEcCCCCEEEeeCCCC
Confidence 8888888887777789999999964432110 00111111112456777777777777778999999965321
Q ss_pred -ce----------eeEec-cCccceEEEEEcCCEEEEEeCCCcEEEEEcCCCcce----------EEEEeecCCccEEEE
Q 016224 304 -QC----------IQTLT-EHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNL----------EVTYTHNEEHGVLAL 361 (393)
Q Consensus 304 -~~----------~~~~~-~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~~----------~~~~~~~~~~~v~~~ 361 (393)
++ ...+. .....|..++.-..+.+.-..||.|..|=.....++ ...........+..+
T Consensus 255 GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v 334 (406)
T 4d9s_A 255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQV 334 (406)
T ss_dssp STTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEE
T ss_pred CCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEE
Confidence 11 11111 122347777777777777789999999965432211 111111222346666
Q ss_pred EeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 362 CGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 362 ~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
+.- ....+.-..||.|+.|=-
T Consensus 335 a~G-----~~hs~alt~~G~v~~wG~ 355 (406)
T 4d9s_A 335 SCG-----WRHTLAVTERNNVFAWGR 355 (406)
T ss_dssp EEC-----SSEEEEEETTSCEEEEEC
T ss_pred EeC-----CCeEEEEeCCCCEEEecC
Confidence 442 224555567899999864
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.86 E-value=10 Score=39.02 Aligned_cols=41 Identities=24% Similarity=0.321 Sum_probs=35.8
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG 191 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 191 (393)
..|.+++..++..+|+|-+.|+++|+|++.+++++.+....
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 35777888888899999999999999999999999887653
No 345
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.58 E-value=0.12 Score=34.96 Aligned_cols=26 Identities=27% Similarity=0.849 Sum_probs=22.6
Q ss_pred ccceeeeecc-cccCCCCCCcccccCC
Q 016224 34 RQKVCNYWRA-GKCNRFPCPYLHRELP 59 (393)
Q Consensus 34 ~~~~~~~~~~-~~~~~~~~~~~~~~~p 59 (393)
+..+|.||.. |.|.+..|+|+|...+
T Consensus 37 ~~~~C~~f~~~G~C~~~~C~f~H~~~~ 63 (77)
T 2d9n_A 37 KMPECYFYSKFGECSNKECPFLHIDPE 63 (77)
T ss_dssp TSCBCHHHHHTCCCCCSSCSSBCCCTT
T ss_pred cCCCCcccCCCCccCCCCeeccCCCcc
Confidence 4568999999 9999888999998754
No 346
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.15 E-value=10 Score=33.99 Aligned_cols=150 Identities=11% Similarity=0.152 Sum_probs=76.6
Q ss_pred EEEEEEeCC-EEEEEe-------------CCCcEEEEEeccCCccccCceee----cCceeeEEEEEE----cCC-EE-E
Q 016224 232 VYAMAVGND-LLFAGT-------------QDGAILAWKFNVTTNCFEPAASL----KGHSLAVVSLVV----GAN-KL-Y 287 (393)
Q Consensus 232 v~~l~~~~~-~l~~~~-------------~dg~I~vwd~~~~~~~~~~~~~~----~~~~~~v~~l~~----~~~-~l-~ 287 (393)
...+...++ ++++++ .+|.|.++|+.+.....+.+... .........+.+ ++. +| +
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 445556666 555554 78999999987532221211111 111223334443 233 33 4
Q ss_pred EecC--CCcEEEeeCCCc----ceeeEeccCc-cceEEEEEc--CCEEEEEeC-----------------CCcEEEEEcC
Q 016224 288 SGSM--DNSIRVWNLETL----QCIQTLTEHT-SVVMSLLCW--DQFLLSCSL-----------------DKTIKVWFAT 341 (393)
Q Consensus 288 sg~~--dg~i~iwd~~~~----~~~~~~~~~~-~~v~~l~~~--~~~l~s~s~-----------------dg~i~iwd~~ 341 (393)
+-.. +.+|.+|++... ..+.++.+.. ...+.+.+. +.+.++... .|.|.-+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 4333 567888876542 2233443321 234667666 555555431 244555554
Q ss_pred CCcceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 342 DSGNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+ .+..+...- .....++|+|+.. .+.++-+..+.|..|++.
T Consensus 211 -~-~~~~~~~~l--~~pNGia~spDg~--~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 211 -N-DVRVVAEGF--DFANGINISPDGK--YVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp -T-CCEEEEEEE--SSEEEEEECTTSS--EEEEEEGGGTEEEEEEEC
T ss_pred -C-eEEEeecCC--cccCcceECCCCC--EEEEEeCCCCeEEEEEEC
Confidence 2 233332221 2367789988754 244445567899999985
No 347
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=89.86 E-value=8.4 Score=32.67 Aligned_cols=184 Identities=8% Similarity=0.037 Sum_probs=102.0
Q ss_pred eCCCEEEE-E-cCCeEEEEECCCCcee-ee-cCCCCcEEEEEEeCC--EEEEEeCCCcEEEEEeccCCccccCceee---
Q 016224 199 SEGPWIFI-G-VTNFVKAWNTQTNTDL-SL-SGPVGQVYAMAVGND--LLFAGTQDGAILAWKFNVTTNCFEPAASL--- 269 (393)
Q Consensus 199 ~~~~~l~~-~-~~~~i~v~d~~~~~~~-~~-~~~~~~v~~l~~~~~--~l~~~~~dg~I~vwd~~~~~~~~~~~~~~--- 269 (393)
+++..|++ . .++.|...|.. ++.+ .+ ..-......|++.++ ++++.-.++.+.++++...... ......
T Consensus 36 ~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i-~~~~~~~~~ 113 (255)
T 3qqz_A 36 AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV-KILKKIKIP 113 (255)
T ss_dssp TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE-EEEEEEECC
T ss_pred CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee-eeeeeeccc
Confidence 34554544 4 55688889988 6655 22 122356778888776 4445446778888888765321 001111
Q ss_pred ---cCceeeEEEEEEc--CCEEEEecCCCcEEEeeCC---CcceeeEec-------cCccceEEEEEc---CCEEEEEeC
Q 016224 270 ---KGHSLAVVSLVVG--ANKLYSGSMDNSIRVWNLE---TLQCIQTLT-------EHTSVVMSLLCW---DQFLLSCSL 331 (393)
Q Consensus 270 ---~~~~~~v~~l~~~--~~~l~sg~~dg~i~iwd~~---~~~~~~~~~-------~~~~~v~~l~~~---~~~l~s~s~ 331 (393)
.........++++ ++.|+++.......||.+. ....+..+. .+.....+++++ +.+++....
T Consensus 114 ~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~ 193 (255)
T 3qqz_A 114 LQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE 193 (255)
T ss_dssp CSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT
T ss_pred cccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECC
Confidence 1123345677876 4467666665555555543 111122221 122345778887 457777777
Q ss_pred CCcEEEEEcCCCcceEEEEeecC-------CccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCc
Q 016224 332 DKTIKVWFATDSGNLEVTYTHNE-------EHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPS 389 (393)
Q Consensus 332 dg~i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s 389 (393)
...|.++|.. ++.+..+.-... -...-.+++.+++. |+..++-+.++.+.-.+
T Consensus 194 s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~----lyIvsE~n~~y~f~~~~ 253 (255)
T 3qqz_A 194 SRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN----IYIVSEPNRFYRFTPQS 253 (255)
T ss_dssp TTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC----EEEEETTTEEEEEEC--
T ss_pred CCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC----EEEEcCCceEEEEEecC
Confidence 8889999975 443333322211 12456788876543 55557777777776543
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.69 E-value=16 Score=36.12 Aligned_cols=183 Identities=12% Similarity=0.100 Sum_probs=97.6
Q ss_pred CCCCEEEEEeCC----CcEEEEECCCCeEEEEE-e-----cCC----ceEEEEe-CCCEEEEE-cC------CeEEEEEC
Q 016224 160 SGSDKLYSGSKD----ETVRVWDCASGQCAGVI-N-----LGG----EVGCMIS-EGPWIFIG-VT------NFVKAWNT 217 (393)
Q Consensus 160 ~~~~~l~s~s~d----g~v~iwd~~~~~~~~~~-~-----~~~----~~~~~~~-~~~~l~~~-~~------~~i~v~d~ 217 (393)
.++.+++.|+.+ ..+.+||..+++-...- . .+. ...+... ++.+++.| .+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46888998887644433 2 111 1223333 66666665 21 36889999
Q ss_pred CCCceeeecC---CCCcEEEEEE-eCCEEEEEeCCC--cEEEEEeccCCccccCcee---ecCceeeEEEEEEc---CCE
Q 016224 218 QTNTDLSLSG---PVGQVYAMAV-GNDLLFAGTQDG--AILAWKFNVTTNCFEPAAS---LKGHSLAVVSLVVG---ANK 285 (393)
Q Consensus 218 ~~~~~~~~~~---~~~~v~~l~~-~~~~l~~~~~dg--~I~vwd~~~~~~~~~~~~~---~~~~~~~v~~l~~~---~~~ 285 (393)
.+.+-..... ....-.++.+ ...+++.|+.++ .+.+||+.+.. +..+.. .........++.++ +..
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 8876543322 1222233333 333777777654 68888877643 222211 11111111223334 446
Q ss_pred EEEecC--C-----CcEEEeeCCCcce-----eeEec----cCccceEEEEEc-CCEEEEEeC--------CCcEEEEEc
Q 016224 286 LYSGSM--D-----NSIRVWNLETLQC-----IQTLT----EHTSVVMSLLCW-DQFLLSCSL--------DKTIKVWFA 340 (393)
Q Consensus 286 l~sg~~--d-----g~i~iwd~~~~~~-----~~~~~----~~~~~v~~l~~~-~~~l~s~s~--------dg~i~iwd~ 340 (393)
++.|+. + ..+.+||+.+.+- -..+. .......++.+. +.+++.|+. ...|.+||+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 666765 2 4588999987661 11111 112223445566 677777774 345899998
Q ss_pred CCCc
Q 016224 341 TDSG 344 (393)
Q Consensus 341 ~~~~ 344 (393)
.+..
T Consensus 634 ~t~~ 637 (695)
T 2zwa_A 634 LSET 637 (695)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7653
No 349
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=89.48 E-value=12 Score=34.02 Aligned_cols=232 Identities=13% Similarity=0.133 Sum_probs=126.1
Q ss_pred CcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC-e----------EEEEEe-c-CCceEEEEeCCCE-EEEEcCC-eEE
Q 016224 149 HQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-Q----------CAGVIN-L-GGEVGCMISEGPW-IFIGVTN-FVK 213 (393)
Q Consensus 149 h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~-~----------~~~~~~-~-~~~~~~~~~~~~~-l~~~~~~-~i~ 213 (393)
-...|..|+.- ..+.+.-..||.|..|=.... + ....+. . ...+..+.....+ ++...++ .|+
T Consensus 14 ~~~~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~ 91 (406)
T 4d9s_A 14 PPRKVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVY 91 (406)
T ss_dssp -CCCEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEE
T ss_pred CccceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEE
Confidence 34566666653 334555567888888864321 1 111111 1 1234555544444 3345554 899
Q ss_pred EEECCCCc---------ee---eecC-CCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccc----cC---ceeecC-c
Q 016224 214 AWNTQTNT---------DL---SLSG-PVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCF----EP---AASLKG-H 272 (393)
Q Consensus 214 v~d~~~~~---------~~---~~~~-~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~----~~---~~~~~~-~ 272 (393)
.|-....- .. .+.. ....|..++......++-+.+|.|+.|-........ .. ...+.. .
T Consensus 92 ~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 171 (406)
T 4d9s_A 92 SWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFE 171 (406)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGT
T ss_pred EEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccC
Confidence 98643211 11 1111 223688888888877777899999999754321100 00 000111 1
Q ss_pred eeeEEEEEEcCCEEEEecCCCcEEEeeCCC-cce----------eeEec-cCccceEEEEEcCCEEEEEeCCCcEEEEEc
Q 016224 273 SLAVVSLVVGANKLYSGSMDNSIRVWNLET-LQC----------IQTLT-EHTSVVMSLLCWDQFLLSCSLDKTIKVWFA 340 (393)
Q Consensus 273 ~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~-~~~----------~~~~~-~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~ 340 (393)
...|..++....+.++-..+|.|+.|-... +++ ...+. .....|..++.-..+.+.-..+|.|..|-.
T Consensus 172 ~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 172 GIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGW 251 (406)
T ss_dssp TCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEEEC
T ss_pred CCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCCcEEEEcCCCCEEEeeC
Confidence 235777888778877778999999996432 110 11111 122467778777778888889999999975
Q ss_pred CCCcce----------EEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 341 TDSGNL----------EVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 341 ~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
....++ ...........+..++.- ....+.-..||.|+.|-.
T Consensus 252 n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G-----~~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 252 SKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG-----WRHTMALTSDGKLYGWGW 303 (406)
T ss_dssp CTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC-----SSEEEEEETTSCEEEEEC
T ss_pred CCCCCCCCCCCcCccccEEecccCCCCEEEEEec-----CCEEEEEcCCCeEEEeeC
Confidence 432221 111111122235555432 224455567888988854
No 350
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=89.42 E-value=12 Score=34.02 Aligned_cols=228 Identities=14% Similarity=0.117 Sum_probs=131.0
Q ss_pred ceEEeeEecCcEEEecCCCeEEEEECCCCcE------------EEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEE
Q 016224 111 DILCRNWVQGNCMYGEKCKFLHSWTVGDGFK------------LLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWD 178 (393)
Q Consensus 111 ~i~c~~~~~~~~~~g~~dg~i~vwd~~~~~~------------~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd 178 (393)
.|..++.-....+.-..||.|+.|-....-+ .-..+. -...|..|+... .+.+.-..||.|..|-
T Consensus 60 ~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-l~~~i~~va~G~--~hs~alt~~G~v~~wG 136 (413)
T 1a12_A 60 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGD--SHTAALTDDGRVFLWG 136 (413)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECC-CCSCEEEEEECS--SEEEEEETTSCEEEEE
T ss_pred CeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEec-CCCcEEEEecCC--CeEEEEcCCCcEEEee
Confidence 4555555555666777899999996542100 001111 123677766543 3555567899999997
Q ss_pred C--CC-CeE-----------EEEEecCCceEEEEeCCC-EEEEEcCCeEEEEECCCCcee--------------------
Q 016224 179 C--AS-GQC-----------AGVINLGGEVGCMISEGP-WIFIGVTNFVKAWNTQTNTDL-------------------- 223 (393)
Q Consensus 179 ~--~~-~~~-----------~~~~~~~~~~~~~~~~~~-~l~~~~~~~i~v~d~~~~~~~-------------------- 223 (393)
. .. +++ ...+.....+..+..... .++...++.|..|-....-.+
T Consensus 137 ~~~n~~GqlG~~~~~~~~~~P~~v~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~ 216 (413)
T 1a12_A 137 SFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 216 (413)
T ss_dssp CEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHH
T ss_pred CCcCCCCccCcCCccccccCCEEecCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccc
Confidence 5 21 111 111222334555554333 445568889999975432110
Q ss_pred -----eecC----CCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCcc--------ccC--ceeecCceeeEEEEEEcCC
Q 016224 224 -----SLSG----PVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNC--------FEP--AASLKGHSLAVVSLVVGAN 284 (393)
Q Consensus 224 -----~~~~----~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~--------~~~--~~~~~~~~~~v~~l~~~~~ 284 (393)
.+.. ....|..++......++-..+|.|+.|=....... ..+ +..+......|..++....
T Consensus 217 ~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~ 296 (413)
T 1a12_A 217 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH 296 (413)
T ss_dssp SCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSS
T ss_pred cCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecccc
Confidence 1100 23568888888886667779999999976532110 001 1111111134777877777
Q ss_pred EEEEecCCCcEEEeeCCC-cc-----------eeeEeccCccceEEEEEcCCEEEEEeCCCcEEEEEcCC
Q 016224 285 KLYSGSMDNSIRVWNLET-LQ-----------CIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 285 ~l~sg~~dg~i~iwd~~~-~~-----------~~~~~~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~ 342 (393)
+.+.-..||.|+.|-... ++ ....+.. ...|..|+.-..+.+.-..||.|..|-...
T Consensus 297 hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~~v~~v~~G~~hs~alt~~G~v~~wG~n~ 365 (413)
T 1a12_A 297 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LPAVSSVACGASVGYAVTKDGRVFAWGMGT 365 (413)
T ss_dssp EEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SSSEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred eEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cCceeEEEECcceEEEEeCCCCEEEecCCC
Confidence 777777899999996532 11 1111111 226788887777777778999999997654
No 351
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.38 E-value=11 Score=33.48 Aligned_cols=69 Identities=10% Similarity=0.137 Sum_probs=44.7
Q ss_pred eEEeeEecC-cEEEecCCCeEEEEECCCC-cEEEEEec---CCcCCEEEEEecCC---CCEEEEEeCC------CcEEEE
Q 016224 112 ILCRNWVQG-NCMYGEKCKFLHSWTVGDG-FKLLTQLE---GHQKVVSGITLPSG---SDKLYSGSKD------ETVRVW 177 (393)
Q Consensus 112 i~c~~~~~~-~~~~g~~dg~i~vwd~~~~-~~~~~~l~---~h~~~I~~i~~s~~---~~~l~s~s~d------g~v~iw 177 (393)
-..++|.++ .++++...+.|++++ ++ .+.+..+. ........|+|+|+ +..|+.+... ..|..+
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 356778766 466777889999998 33 12333322 22457899999998 5556554432 578888
Q ss_pred ECCCC
Q 016224 178 DCASG 182 (393)
Q Consensus 178 d~~~~ 182 (393)
+...+
T Consensus 111 ~~~~~ 115 (352)
T 2ism_A 111 RHLGE 115 (352)
T ss_dssp EECSS
T ss_pred EeCCC
Confidence 87644
No 352
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=89.08 E-value=0.13 Score=36.61 Aligned_cols=25 Identities=32% Similarity=1.031 Sum_probs=20.6
Q ss_pred ccccceeeeecccccCCCC-CCcccc
Q 016224 32 DTRQKVCNYWRAGKCNRFP-CPYLHR 56 (393)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~ 56 (393)
.....+|.||+.|.|.+-. |+|.|.
T Consensus 10 ~~k~~lC~~f~~G~C~~G~~C~f~H~ 35 (98)
T 2cqe_A 10 PKKRELCKFYITGFCARAENCPYMHG 35 (98)
T ss_dssp SCCCSBCTTTTTTCCSCSTTCSSBSS
T ss_pred CCCCccCcccccCcCCCCCCCCCCCC
Confidence 3567789999999999865 999998
No 353
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=88.93 E-value=0.2 Score=34.92 Aligned_cols=27 Identities=26% Similarity=0.671 Sum_probs=22.6
Q ss_pred cccceeeeecccccCCC--CCCcccccCC
Q 016224 33 TRQKVCNYWRAGKCNRF--PCPYLHRELP 59 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~--~~~~~~~~~p 59 (393)
..--||++|.+|+|+|- .|+|.|..-+
T Consensus 15 ~~~~VCrdFlrG~C~r~d~~CrfsH~~~~ 43 (89)
T 2rpp_A 15 LTLEVCRQFQRGTCSRSDEECKFAHPPKS 43 (89)
T ss_dssp SEECBCHHHHHTCCCCCTTTSSSBCCCSS
T ss_pred chhhhchHHhcCCCCCCCCCCCCcCCCcc
Confidence 34569999999999997 8999997643
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=87.83 E-value=7.9 Score=38.07 Aligned_cols=114 Identities=13% Similarity=0.132 Sum_probs=68.7
Q ss_pred CCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccccCc------------eeec-----CceeeEEEEEEcCCEEEEecC
Q 016224 229 VGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPA------------ASLK-----GHSLAVVSLVVGANKLYSGSM 291 (393)
Q Consensus 229 ~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~~~~------------~~~~-----~~~~~v~~l~~~~~~l~sg~~ 291 (393)
..+..-++.+++.++++-.||.+.-.+-.... .+++. .-+. .....|.++.++..++++-+.
T Consensus 161 R~Ph~L~avs~~~liVsL~DGGLLrL~r~~~~-d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~~~~fLftL~~ 239 (729)
T 3f7f_A 161 RVPHFLFYVSPQFSVVFLEDGGLLGLKKVDGV-HYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLFHERYLIVLTQ 239 (729)
T ss_dssp SCEEEEEECSSSBEEEEETTSCEECCEESSSS-CEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEETTTEEEEEET
T ss_pred cCCcEEEEECCCeEEEEEcCCCEEEEEeccCC-CcceeeecCCchhhhhHHhhcCCCCCCcCceEEEeccCCcEEEEEEc
Confidence 34455566667777777777776655533221 11100 0011 122356777788889999999
Q ss_pred CCcEEEeeCCCcceeeEeccCc-------------cceEEEEEcCCEEEEEe--CCCcEEEEEcCCC
Q 016224 292 DNSIRVWNLETLQCIQTLTEHT-------------SVVMSLLCWDQFLLSCS--LDKTIKVWFATDS 343 (393)
Q Consensus 292 dg~i~iwd~~~~~~~~~~~~~~-------------~~v~~l~~~~~~l~s~s--~dg~i~iwd~~~~ 343 (393)
|.++|+||+++++++.+..-.. .+-.-+...+.++++=+ .+|..++|.+...
T Consensus 240 Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~~l~~~ 306 (729)
T 3f7f_A 240 NCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMGTLLVD 306 (729)
T ss_dssp TCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEEEEEC-
T ss_pred CCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEEEEEEc
Confidence 9999999999999887765411 11122233355655433 4678999988543
No 355
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=86.49 E-value=18 Score=32.60 Aligned_cols=154 Identities=16% Similarity=0.180 Sum_probs=84.6
Q ss_pred cEEEEEEeCCEEEEEeCCCcEEEEEeccCCcc----------ccCceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeC
Q 016224 231 QVYAMAVGNDLLFAGTQDGAILAWKFNVTTNC----------FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNL 300 (393)
Q Consensus 231 ~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~----------~~~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~ 300 (393)
.+..++......++-..||.|+.|=....... ...+..+......+..++....+.+.-..||.|+.|-.
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEEC
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeC
Confidence 45666666667777788999999864432110 00111111112233344445667777788999999964
Q ss_pred CC-cc----------eeeEecc-CccceEEEEEcCCEEEEEeCCCcEEEEEcCCCcc---------e-EEEEeecCCccE
Q 016224 301 ET-LQ----------CIQTLTE-HTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGN---------L-EVTYTHNEEHGV 358 (393)
Q Consensus 301 ~~-~~----------~~~~~~~-~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~---------~-~~~~~~~~~~~v 358 (393)
.. ++ ....+.. ....|..++.-..+.+.-..||.|..|-.....+ . ...........+
T Consensus 134 n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v 213 (389)
T 3kci_A 134 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRV 213 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCE
T ss_pred CCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeE
Confidence 32 11 1111111 2236788888788888888999999996532111 1 111111122345
Q ss_pred EEEEeeeCCCCCcEEEEEeCCCeEEEEeC
Q 016224 359 LALCGMPDSEGKPVLLCSCNDNSVRFYDL 387 (393)
Q Consensus 359 ~~~~~~~~~~~~~~l~s~s~dg~I~iwd~ 387 (393)
..++.-. +....+.-..||.|..|-.
T Consensus 214 ~~ia~G~---g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 214 VDIACGS---GDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp EEEEECC---SSCEEEEEETTTEEEEEEC
T ss_pred EEEEEcC---CCcEEEEEccCCEEEEEeC
Confidence 5554421 1125566678899999854
No 356
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=84.80 E-value=23 Score=32.26 Aligned_cols=261 Identities=11% Similarity=0.068 Sum_probs=139.6
Q ss_pred CcEEEecCCCeEEEEECCC------C-----cEEEEEecCCcCCEEEEEecCCCCEEEEEeCCCcEEEEECCCC-e----
Q 016224 120 GNCMYGEKCKFLHSWTVGD------G-----FKLLTQLEGHQKVVSGITLPSGSDKLYSGSKDETVRVWDCASG-Q---- 183 (393)
Q Consensus 120 ~~~~~g~~dg~i~vwd~~~------~-----~~~~~~l~~h~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~-~---- 183 (393)
...+.-..+|.|+.|=... + ......+. .-..|..|+.. ..+.+.-..||.|..|-.... +
T Consensus 34 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~-~l~~v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~ 110 (423)
T 3mvd_K 34 ELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVA-GIPDAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRD 110 (423)
T ss_dssp CCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECC-SCSSEEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSC
T ss_pred ccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEcc-CCCCceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCC
Confidence 3334456677788874321 0 01111222 22457666654 456666678999999965321 1
Q ss_pred --------EEEEEecCCceEEEEeC-CCEEEEEcCCeEEEEEC--CCCcee-----------eecCCCCcEEEEEEeCCE
Q 016224 184 --------CAGVINLGGEVGCMISE-GPWIFIGVTNFVKAWNT--QTNTDL-----------SLSGPVGQVYAMAVGNDL 241 (393)
Q Consensus 184 --------~~~~~~~~~~~~~~~~~-~~~l~~~~~~~i~v~d~--~~~~~~-----------~~~~~~~~v~~l~~~~~~ 241 (393)
....+.....+..+... ...++...++.|..|-. ...-.+ ........|..++...+.
T Consensus 111 ~~~~~~~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~h 190 (423)
T 3mvd_K 111 TSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADH 190 (423)
T ss_dssp CCSTTSSSSCEECCCSSCEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSE
T ss_pred CcCCccccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCe
Confidence 11122233445555543 34455568889999975 221111 112234568888888887
Q ss_pred EEEEeCCCcEEEEEeccCCcc-------------------ccCceeecCceeeEEEEEEcCCEEEEe-cCCCcEEEeeCC
Q 016224 242 LFAGTQDGAILAWKFNVTTNC-------------------FEPAASLKGHSLAVVSLVVGANKLYSG-SMDNSIRVWNLE 301 (393)
Q Consensus 242 l~~~~~dg~I~vwd~~~~~~~-------------------~~~~~~~~~~~~~v~~l~~~~~~l~sg-~~dg~i~iwd~~ 301 (393)
.++-..+|.|+.|=....... ..+..........|..++......+.. ..++.|..|-..
T Consensus 191 s~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n 270 (423)
T 3mvd_K 191 LVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLN 270 (423)
T ss_dssp EEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred EEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCC
Confidence 777789999999964432110 011111111223566666655543333 689999999643
Q ss_pred Ccc-----------eeeEeccCccceEEEEEcCCEEEEEeCCCcEEEEEcCCCcc---------eEEE-EeecCCccEEE
Q 016224 302 TLQ-----------CIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGN---------LEVT-YTHNEEHGVLA 360 (393)
Q Consensus 302 ~~~-----------~~~~~~~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~~~~---------~~~~-~~~~~~~~v~~ 360 (393)
..- ...........|..|+.-..+.+.-..||.|..|-.....+ .... ........+..
T Consensus 271 ~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ 350 (423)
T 3mvd_K 271 NFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVS 350 (423)
T ss_dssp TTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEE
T ss_pred CCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEE
Confidence 211 11111111346777877777777888999999996532211 1111 11111114666
Q ss_pred EEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 361 LCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 361 ~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
++.-.. ..+.-..||.|+.|=..
T Consensus 351 ia~G~~-----hs~alt~~G~v~~wG~n 373 (423)
T 3mvd_K 351 VGCGEV-----CSYAVTIDGKLYSWGSG 373 (423)
T ss_dssp EEEETT-----EEEEEETTSCEEEEECC
T ss_pred EEcCCC-----eEEEEcCCCCEEEECCC
Confidence 654322 34444788999999654
No 357
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=80.59 E-value=30 Score=30.61 Aligned_cols=92 Identities=13% Similarity=0.234 Sum_probs=49.8
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEec------CCceEEE-E-eC---CCEEEEE-c-C-----CeE
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINL------GGEVGCM-I-SE---GPWIFIG-V-T-----NFV 212 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------~~~~~~~-~-~~---~~~l~~~-~-~-----~~i 212 (393)
..-..|+|.|++++++ +..+|.|.+++ +++....... ......+ . ++ +..|.++ . . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4567899999998554 56679999998 4543222111 1122222 2 33 3455554 2 1 677
Q ss_pred EEEECCCCc-----ee-e-ec---CCCCcEEEEEEeCC-EEEEE
Q 016224 213 KAWNTQTNT-----DL-S-LS---GPVGQVYAMAVGND-LLFAG 245 (393)
Q Consensus 213 ~v~d~~~~~-----~~-~-~~---~~~~~v~~l~~~~~-~l~~~ 245 (393)
..++..... .+ . +. ........|+|.++ .|+++
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 788876432 11 1 22 11123357899888 44443
No 358
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=79.29 E-value=1.1 Score=30.12 Aligned_cols=31 Identities=16% Similarity=0.560 Sum_probs=24.5
Q ss_pred cccccccceeeee-cccccCC-CCCCcccccCC
Q 016224 29 STADTRQKVCNYW-RAGKCNR-FPCPYLHRELP 59 (393)
Q Consensus 29 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~p 59 (393)
.......+.|.+| +.|.|.. .-|+|.|....
T Consensus 6 ~~~~~kt~~C~~f~~~G~C~~G~~C~f~H~~~e 38 (77)
T 1m9o_A 6 TSSRYKTELCRTYSESGRCRYGAKCQFAHGLGE 38 (77)
T ss_dssp CSSCCCSCCCSGGGGTSCCTTTTTCSSCSSSCC
T ss_pred CCCCccchhCHHhhhCCCcCCCCCccCCCCChh
Confidence 3446677899999 5999997 67999997643
No 359
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=78.06 E-value=9.4 Score=31.65 Aligned_cols=98 Identities=9% Similarity=-0.037 Sum_probs=56.1
Q ss_pred CEEEEEecCCCCEEEEEeCCCcEEEEECCCCeE------EEEEec---CC-ceEEEEeCCCEEEEEcCCeEEEEECCCCc
Q 016224 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQC------AGVINL---GG-EVGCMISEGPWIFIGVTNFVKAWNTQTNT 221 (393)
Q Consensus 152 ~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~------~~~~~~---~~-~~~~~~~~~~~l~~~~~~~i~v~d~~~~~ 221 (393)
.++.++|+|++.+.+. .+|.+.-.+..+.+. ...+-. .. ....+.+++.+.++ .|+.|.-++..+..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSD 118 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCST
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCC
Confidence 6679999998885555 677666656544211 111110 01 12223346666666 77888877764432
Q ss_pred ee--------eecCCCCcEEEEEEeCC-EEEEEeCCCcEEE
Q 016224 222 DL--------SLSGPVGQVYAMAVGND-LLFAGTQDGAILA 253 (393)
Q Consensus 222 ~~--------~~~~~~~~v~~l~~~~~-~l~~~~~dg~I~v 253 (393)
.. .-..--..+..|.+.|+ .|.+.. |+.++-
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr 158 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK 158 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence 11 01112246789999999 666666 888543
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.86 E-value=10 Score=39.96 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=33.8
Q ss_pred CEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 016224 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG 191 (393)
Q Consensus 152 ~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 191 (393)
.|.+++..++..+|++-+.|+++|||++.+++++.+....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 4455666778889999999999999999999999987654
No 361
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=72.55 E-value=1.3 Score=31.38 Aligned_cols=31 Identities=19% Similarity=0.419 Sum_probs=24.5
Q ss_pred cccccccceeeee-cccccCC-CCCCcccccCC
Q 016224 29 STADTRQKVCNYW-RAGKCNR-FPCPYLHRELP 59 (393)
Q Consensus 29 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~p 59 (393)
+.+.-...+|.|| +.|.|.. ..|+|.|..++
T Consensus 30 C~f~H~~~~C~~f~~~G~C~~G~~C~f~H~~~~ 62 (98)
T 2cqe_A 30 CPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLT 62 (98)
T ss_dssp CSSBSSSSBCSHHHHTSCCSSCTTCSSBCCCCC
T ss_pred CCCCCCCCcCcCcccCCcCCCCCCCcccCCCCc
Confidence 5554447899999 5999998 88999998654
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.10 E-value=11 Score=37.00 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=31.7
Q ss_pred CEEEEEecCCCCEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 016224 152 VVSGITLPSGSDKLYSGSKDETVRVWDCASGQCAGVINLG 191 (393)
Q Consensus 152 ~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 191 (393)
.|.++.+ +..+|++-+.|.++|+|++.+++++.+....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEETT
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeeccc
Confidence 4665555 3679999999999999999999999888763
No 363
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=65.59 E-value=85 Score=29.00 Aligned_cols=189 Identities=14% Similarity=0.171 Sum_probs=107.5
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECC---CCeE----------E--EEEecC--CceEEEEeCC-CEEEEEcCCeE
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCA---SGQC----------A--GVINLG--GEVGCMISEG-PWIFIGVTNFV 212 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~---~~~~----------~--~~~~~~--~~~~~~~~~~-~~l~~~~~~~i 212 (393)
..|..|+... ...+.-..||.|..|-.. .++. . ..+... ..+..+.... ..++...++.|
T Consensus 148 ~~i~~va~G~--~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v 225 (473)
T 3of7_A 148 HKVVQLAATD--NMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMV 225 (473)
T ss_dssp CCEEEEEECS--SEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCE
T ss_pred CcEEEEEccC--CEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeE
Confidence 4676666643 345555778999999751 1111 0 111111 1244555443 34555688899
Q ss_pred EEEECCCCcee--------------eecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCccc------------cCc
Q 016224 213 KAWNTQTNTDL--------------SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCF------------EPA 266 (393)
Q Consensus 213 ~v~d~~~~~~~--------------~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~~------------~~~ 266 (393)
..|-....-.+ ...-....|..++......++-+.+|.|+.|=........ .+.
T Consensus 226 ~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~ 305 (473)
T 3of7_A 226 FAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPK 305 (473)
T ss_dssp EEEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEE
T ss_pred EEEeCCCCCCCCCCccccccccccCceecCCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccc
Confidence 99975432211 0000124688888887777777889999999765321100 010
Q ss_pred eeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCC-cce------------------------eeEeccCccceEEEEE
Q 016224 267 ASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLET-LQC------------------------IQTLTEHTSVVMSLLC 321 (393)
Q Consensus 267 ~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~-~~~------------------------~~~~~~~~~~v~~l~~ 321 (393)
.........|..++......+.-..+|.|..|-... +++ ...+. ....|..|+.
T Consensus 306 ~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~-~~~~v~~Ia~ 384 (473)
T 3of7_A 306 RLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLN-NVPKFKSVAA 384 (473)
T ss_dssp ECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECC-SSCCEEEEEE
T ss_pred cccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccC-CCCceEEEEe
Confidence 000111245777777777766667899999996432 111 01111 1125777777
Q ss_pred cCCEEEEEeCCCcEEEEEcCC
Q 016224 322 WDQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 322 ~~~~l~s~s~dg~i~iwd~~~ 342 (393)
-....++-..||.|..|=...
T Consensus 385 G~~hs~al~~~G~vy~wG~n~ 405 (473)
T 3of7_A 385 GSHHSVAVAQNGIAYSWGFGE 405 (473)
T ss_dssp CSSEEEEEETTSCEEEEECCT
T ss_pred CCCeEEEEeCCCcEEEeeCCC
Confidence 777777778999999997654
No 364
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.08 E-value=47 Score=34.11 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=26.2
Q ss_pred cEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCCceee
Q 016224 357 GVLALCGMPDSEGKPVLLCSCNDNSVRFYDLPSVII 392 (393)
Q Consensus 357 ~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~s~~l 392 (393)
.+.+++..++.. ++++-+.|+++|+|++.++++
T Consensus 237 ~~~~~~~~~~~~---~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYN---VLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTT---EEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCc---EEEEEECCCEEEEEECCCCCe
Confidence 456666555444 999999999999999999875
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.92 E-value=22 Score=37.45 Aligned_cols=29 Identities=34% Similarity=0.491 Sum_probs=25.3
Q ss_pred cCCEEEEecCCCcEEEeeCCCcceeeEec
Q 016224 282 GANKLYSGSMDNSIRVWNLETLQCIQTLT 310 (393)
Q Consensus 282 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 310 (393)
+..++++-+.|+++|||++.+++++.+..
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 35689999999999999999999988754
No 366
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=59.63 E-value=1e+02 Score=27.81 Aligned_cols=231 Identities=15% Similarity=0.086 Sum_probs=128.6
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECCCC-e------------EEEEEecCCceEEEEeCC-CEEEEEcCCeEEEEE
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCASG-Q------------CAGVINLGGEVGCMISEG-PWIFIGVTNFVKAWN 216 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~-~------------~~~~~~~~~~~~~~~~~~-~~l~~~~~~~i~v~d 216 (393)
..|..|+... .+.+.-..||.|..|-.... + ....+.....+..+.... ..++...++.|..|-
T Consensus 59 ~~i~~va~G~--~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~l~~~i~~va~G~~hs~alt~~G~v~~wG 136 (413)
T 1a12_A 59 EDVVQAEAGG--MHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWG 136 (413)
T ss_dssp SCEEEEEECS--SEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEE
T ss_pred CCeEEEEeCC--CeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEecCCCcEEEEecCCCeEEEEcCCCcEEEee
Confidence 5677777643 34555568899999965421 0 011112334455555433 344556888999987
Q ss_pred C--CCCce------------eeecCCCCcEEEEEEeCCEEEEEeCCCcEEEEEeccCCcc-------------------c
Q 016224 217 T--QTNTD------------LSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNC-------------------F 263 (393)
Q Consensus 217 ~--~~~~~------------~~~~~~~~~v~~l~~~~~~l~~~~~dg~I~vwd~~~~~~~-------------------~ 263 (393)
. ...-. .........|..++...+..++-+.+|.|+.|=....... .
T Consensus 137 ~~~n~~GqlG~~~~~~~~~~P~~v~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~ 216 (413)
T 1a12_A 137 SFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 216 (413)
T ss_dssp CEEETTEEEESSBBTBCEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHH
T ss_pred CCcCCCCccCcCCccccccCCEEecCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccc
Confidence 5 21110 1111234578888887777777789999999965432110 0
Q ss_pred cCc-eeecC----ceeeEEEEEEcCCEEEEecCCCcEEEeeCCC-cce----------eeE---eccCccceEEEEEcCC
Q 016224 264 EPA-ASLKG----HSLAVVSLVVGANKLYSGSMDNSIRVWNLET-LQC----------IQT---LTEHTSVVMSLLCWDQ 324 (393)
Q Consensus 264 ~~~-~~~~~----~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~-~~~----------~~~---~~~~~~~v~~l~~~~~ 324 (393)
.+. ..+.. ....|..++....+.++-..+|.|+.|-... +++ ... +......|..++.-..
T Consensus 217 ~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~ 296 (413)
T 1a12_A 217 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH 296 (413)
T ss_dssp SCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSS
T ss_pred cCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecccc
Confidence 110 00100 2346778887777777777899999997543 110 111 1111134778877777
Q ss_pred EEEEEeCCCcEEEEEcCCCcc---------eEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCeEEEEeCC
Q 016224 325 FLLSCSLDKTIKVWFATDSGN---------LEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNSVRFYDLP 388 (393)
Q Consensus 325 ~l~s~s~dg~i~iwd~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~I~iwd~~ 388 (393)
+.+.-..||.|..|-.....+ ...-........+..++.- ....+.-..||.|+.|-..
T Consensus 297 hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G-----~~hs~alt~~G~v~~wG~n 364 (413)
T 1a12_A 297 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACG-----ASVGYAVTKDGRVFAWGMG 364 (413)
T ss_dssp EEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEEC-----SSEEEEEETTSCEEEEECC
T ss_pred eEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecccCceeEEEEC-----cceEEEEeCCCCEEEecCC
Confidence 777778899999996532111 1111111111245555432 1244555678999999653
No 367
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=59.36 E-value=2.5 Score=35.54 Aligned_cols=25 Identities=28% Similarity=0.624 Sum_probs=21.2
Q ss_pred cccceeeeecccccCC-CCCCccccc
Q 016224 33 TRQKVCNYWRAGKCNR-FPCPYLHRE 57 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~-~~~~~~~~~ 57 (393)
.+...|.||-.|.|.+ .-|||+|..
T Consensus 68 ~~~~~C~ffakG~C~~G~~C~y~H~l 93 (240)
T 3u1l_A 68 GQLFFCLFFAKGMCCLGPKCEYLHHI 93 (240)
T ss_dssp TCCSBCHHHHTTCCSCGGGCSSBBSC
T ss_pred CCCeEcCccccCCCCCCCCCCccCCC
Confidence 4556999999999999 559999964
No 368
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=58.39 E-value=97 Score=27.29 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=44.8
Q ss_pred eEEeeEecC-cEEEecCCCeEEEEECCCCcEEEEEec---CCcCCEEEEEecCC---CCEEEEEeC----C----CcEEE
Q 016224 112 ILCRNWVQG-NCMYGEKCKFLHSWTVGDGFKLLTQLE---GHQKVVSGITLPSG---SDKLYSGSK----D----ETVRV 176 (393)
Q Consensus 112 i~c~~~~~~-~~~~g~~dg~i~vwd~~~~~~~~~~l~---~h~~~I~~i~~s~~---~~~l~s~s~----d----g~v~i 176 (393)
-..++|.++ .++++..++.|++++ .++.+.+..+. ........|+|+|+ +..|+.+.. + ..|..
T Consensus 31 P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred CeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 356777765 566788889999997 34522333322 22356899999997 555555443 3 56777
Q ss_pred EECCCC
Q 016224 177 WDCASG 182 (393)
Q Consensus 177 wd~~~~ 182 (393)
|+....
T Consensus 110 ~~~~~~ 115 (354)
T 3a9g_A 110 GRLDGS 115 (354)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 776654
No 369
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=57.28 E-value=1.2e+02 Score=27.98 Aligned_cols=150 Identities=17% Similarity=0.166 Sum_probs=87.7
Q ss_pred ceEEEEeC-CCEEEEEcCCeEEEEECC---CCc-------------eeeecC-CCCcEEEEEEeCCEEEEEeCCCcEEEE
Q 016224 193 EVGCMISE-GPWIFIGVTNFVKAWNTQ---TNT-------------DLSLSG-PVGQVYAMAVGNDLLFAGTQDGAILAW 254 (393)
Q Consensus 193 ~~~~~~~~-~~~l~~~~~~~i~v~d~~---~~~-------------~~~~~~-~~~~v~~l~~~~~~l~~~~~dg~I~vw 254 (393)
.+..+... ...++...++.|+.|-.. .+. ...+.. ....|..++...+..++-+.+|.|+.|
T Consensus 149 ~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~w 228 (473)
T 3of7_A 149 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAW 228 (473)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEEEE
T ss_pred cEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEEEE
Confidence 34444443 334555678889888751 110 011111 123588888888877777899999999
Q ss_pred EeccCCcccc---------CceeecCceeeEEEEEEcCCEEEEecCCCcEEEeeCCC-cc-----------ee---eEec
Q 016224 255 KFNVTTNCFE---------PAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLET-LQ-----------CI---QTLT 310 (393)
Q Consensus 255 d~~~~~~~~~---------~~~~~~~~~~~v~~l~~~~~~l~sg~~dg~i~iwd~~~-~~-----------~~---~~~~ 310 (393)
-......... ...........|..++....+.++-..+|.|+.|-... ++ .+ ..+.
T Consensus 229 G~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~v~ 308 (473)
T 3of7_A 229 GNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLA 308 (473)
T ss_dssp ECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEECC
T ss_pred eCCCCCCCCCCccccccccccCceecCCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeecccccc
Confidence 6543211000 00000001145778888777777777899999996432 11 11 1111
Q ss_pred -cCccceEEEEEcCCEEEEEeCCCcEEEEEcCC
Q 016224 311 -EHTSVVMSLLCWDQFLLSCSLDKTIKVWFATD 342 (393)
Q Consensus 311 -~~~~~v~~l~~~~~~l~s~s~dg~i~iwd~~~ 342 (393)
.....|..|+.-..+.+.-..||.|..|-...
T Consensus 309 ~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~ 341 (473)
T 3of7_A 309 LPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLD 341 (473)
T ss_dssp CCTTCCEEEEEECSSEEEEEETTSCEEEEEECT
T ss_pred ccCCccEEEEEeCCCeEEEEeCCCeEEEEECCC
Confidence 12245778877777777778899999997543
No 370
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=48.56 E-value=1.5e+02 Score=26.57 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=36.9
Q ss_pred cEEEeeCCCc--ceeeEeccC------ccceEEEEEc---------CCEEEEE-eCCCcEEEEEcCCCcceEEE
Q 016224 294 SIRVWNLETL--QCIQTLTEH------TSVVMSLLCW---------DQFLLSC-SLDKTIKVWFATDSGNLEVT 349 (393)
Q Consensus 294 ~i~iwd~~~~--~~~~~~~~~------~~~v~~l~~~---------~~~l~s~-s~dg~i~iwd~~~~~~~~~~ 349 (393)
+|.+||+.+. +.++++.-. ...+..+.++ +.++... +....|.|+|+.+++....+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 5777888887 777776532 3456777776 2343333 34678999999887765544
No 371
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.78 E-value=6.8 Score=25.47 Aligned_cols=22 Identities=23% Similarity=0.801 Sum_probs=20.0
Q ss_pred ceeeeecccccCC-CCCCccccc
Q 016224 36 KVCNYWRAGKCNR-FPCPYLHRE 57 (393)
Q Consensus 36 ~~~~~~~~~~~~~-~~~~~~~~~ 57 (393)
+.|.+|..|.|.. .-|.|-|.+
T Consensus 21 ~LC~~~~~G~C~~G~~C~FAHG~ 43 (69)
T 2d9m_A 21 SICDRYMNGTCPEGNSCKFAHGN 43 (69)
T ss_dssp SBCHHHHHSCCSSCSSCSSBSSH
T ss_pred ccCcccCcCCCCCCCccCCcCCH
Confidence 8999999999998 779999965
No 372
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=38.92 E-value=1.7e+02 Score=24.25 Aligned_cols=101 Identities=10% Similarity=0.044 Sum_probs=52.3
Q ss_pred EEEEeCCCEEEEEcCCeEEEEECCCCceeeecCCCCcE--------EEEEEeCC-EEEEEeCCCcEEEEEeccCCcc-cc
Q 016224 195 GCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQV--------YAMAVGND-LLFAGTQDGAILAWKFNVTTNC-FE 264 (393)
Q Consensus 195 ~~~~~~~~~l~~~~~~~i~v~d~~~~~~~~~~~~~~~v--------~~l~~~~~-~l~~~~~dg~I~vwd~~~~~~~-~~ 264 (393)
..+.+++.+.++ .++.+.-.+..+.......+....| .++.|+++ .|.++ .||.|+-++-.+.... +.
T Consensus 46 laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl 123 (236)
T 1tl2_A 46 LFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWI 123 (236)
T ss_dssp EEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHH
T ss_pred EEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCcee
Confidence 334467777777 7777777776553322222222233 67889988 55555 6698887764332111 00
Q ss_pred Cc-eee-cCceeeEEEEEEcCC-EEEEecCCCcEEEe
Q 016224 265 PA-ASL-KGHSLAVVSLVVGAN-KLYSGSMDNSIRVW 298 (393)
Q Consensus 265 ~~-~~~-~~~~~~v~~l~~~~~-~l~sg~~dg~i~iw 298 (393)
-. ..+ ..--..+..|.++++ .|++.. |+.++-.
T Consensus 124 ~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~ 159 (236)
T 1tl2_A 124 ARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA 159 (236)
T ss_dssp HHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred ccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence 00 000 111134567777644 444554 7776443
No 373
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=36.57 E-value=2e+02 Score=24.58 Aligned_cols=120 Identities=6% Similarity=0.017 Sum_probs=60.1
Q ss_pred eEEEEECCCCceeeecCCCCcEEEEEEeCCEEEEEe--CCC--cEEEEEeccCCccccCceeecCceeeEEEEEEcCCEE
Q 016224 211 FVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGT--QDG--AILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKL 286 (393)
Q Consensus 211 ~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~--~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l 286 (393)
.|+..++...+...+.... ...+....+.|+-.. .++ .|...++.... ...+..+.. ..+.+.++.|
T Consensus 89 ~Iy~i~~dg~~~~~l~~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-----~~~lt~~~~--~~~~~~g~~i 159 (302)
T 3s25_A 89 SLCRIKRNGHGSTVLDPDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-----KKKIKNHYL--FTCNTSDRYF 159 (302)
T ss_dssp EEEEEETTSCCCEEEECSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-----CEEEESSCC--CCSEEETTEE
T ss_pred eEEEEeCCCCcceEeecCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-----eEEEeCCCc--eEeeEECCEE
Confidence 5677777766544443322 234555666555444 344 44444444321 222322322 3457777766
Q ss_pred EEec-CCCcEEEeeCCCcceeeEeccCccceEEEEEcCCEEEEEeCC--CcEEEEEcC
Q 016224 287 YSGS-MDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLD--KTIKVWFAT 341 (393)
Q Consensus 287 ~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~s~d--g~i~iwd~~ 341 (393)
+-.+ ....|.+-++..+.....+.+.. . ..+...+++|+-...+ ..|..-++.
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~~~~-~-~~~~P~g~~iy~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYDCNC-Y-KPVVLDDTNVYYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEECSCE-E-EEEEEETTEEEEEEGGGTTEEEEECSS
T ss_pred EEEeCCCceEEEEECCCCCEEEEeCCCc-c-ceeeecCCEEEEEEcCCCcEEEEEECC
Confidence 6444 46788888887655433333211 1 1233356666654433 245444554
No 374
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=35.20 E-value=2.3e+02 Score=24.77 Aligned_cols=30 Identities=7% Similarity=0.202 Sum_probs=22.9
Q ss_pred CCEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 016224 151 KVVSGITLPSGSDKLYSGSKDETVRVWDCA 180 (393)
Q Consensus 151 ~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~ 180 (393)
..-..|+|.|+++.|+.+...|.|++++..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 356789999999844455678999999853
No 375
>8tfv_A Protein (thanatin); bactericidal, fungicidal, antimicrobial; NMR {Synthetic} SCOP: j.3.1.2
Probab=32.31 E-value=7.8 Score=17.73 Aligned_cols=13 Identities=46% Similarity=0.889 Sum_probs=7.9
Q ss_pred eeeee--cccccCCC.....
Q 016224 37 VCNYW--RAGKCNRF..... 49 (393)
Q Consensus 37 ~~~~~--~~~~~~~~..... 49 (393)
+.+|+ |.|+|+|+
T Consensus 7 piiycnrrtgkcqrm..... 21 (21)
T 8tfv_A 7 PIIYCNRRTGKCQRMxxxxx 26 (26)
T ss_dssp CCEEEEGGGTEEEEC.....
T ss_pred cEEEEcCcccceecC.....
Confidence 34444 57888774
No 376
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=30.15 E-value=2.5e+02 Score=23.67 Aligned_cols=153 Identities=12% Similarity=0.083 Sum_probs=83.1
Q ss_pred CCcEEEEEEe--C-CEEEEEeCCCcEEEEEeccCCcc--ccCceeecCceeeEEEEEE--cCCEEEEecCCCcEEEeeCC
Q 016224 229 VGQVYAMAVG--N-DLLFAGTQDGAILAWKFNVTTNC--FEPAASLKGHSLAVVSLVV--GANKLYSGSMDNSIRVWNLE 301 (393)
Q Consensus 229 ~~~v~~l~~~--~-~~l~~~~~dg~I~vwd~~~~~~~--~~~~~~~~~~~~~v~~l~~--~~~~l~sg~~dg~i~iwd~~ 301 (393)
...|..+... + ..++..+.+|.|+...+..-... ......+... ..+..+.. ..+.++..+..|.+..++..
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkeg-D~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEG-DEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTT-CCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCC-CEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 3445554332 2 38899999999999987653200 0111122222 23333332 24578888889988888653
Q ss_pred C---------cceeeEeccCccceEEEE-Ec-CCEEEEEeCCCcEEEEEcCCCc-------ceEEEEeecCCccEEEEEe
Q 016224 302 T---------LQCIQTLTEHTSVVMSLL-CW-DQFLLSCSLDKTIKVWFATDSG-------NLEVTYTHNEEHGVLALCG 363 (393)
Q Consensus 302 ~---------~~~~~~~~~~~~~v~~l~-~~-~~~l~s~s~dg~i~iwd~~~~~-------~~~~~~~~~~~~~v~~~~~ 363 (393)
. |...-.+... ..|..+. .. +.+++..+..|.++...+.+-. -+..+ .....+..+..
T Consensus 146 eip~~gR~a~Gv~~i~L~~~-d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i---~~~~~lv~~~~ 221 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEKN-DETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS---GTKDTLVDLIP 221 (276)
T ss_dssp GSCBCCTTCCCEECCCCCTT-CCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC---CSSSCEEEEEE
T ss_pred hCCCcCCCCCCEEEEccCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE---cCCCcEEEEEE
Confidence 2 2222233332 4454443 33 5689999999999998875321 11222 22233444433
Q ss_pred eeCCCCCcEEEEEeCCCeEEE--EeCCc
Q 016224 364 MPDSEGKPVLLCSCNDNSVRF--YDLPS 389 (393)
Q Consensus 364 ~~~~~~~~~l~s~s~dg~I~i--wd~~s 389 (393)
.. . + ..++..+.+|.+.. +++..
T Consensus 222 ~~-~-~-~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 222 IK-E-E-VELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ES-S-E-EEEEEEETTSCEEEEEEEGGG
T ss_pred eC-C-C-CEEEEEcCCCeEEEeeeCHHH
Confidence 22 1 1 24666777888777 76654
No 377
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.48 E-value=4.9e+02 Score=25.52 Aligned_cols=56 Identities=16% Similarity=0.187 Sum_probs=35.0
Q ss_pred CCCcEEEEEcCCC-------cceEEEEeecCCccEEEEEeeeCCCCCcEEEEEeCCCe--EEEEeCCce
Q 016224 331 LDKTIKVWFATDS-------GNLEVTYTHNEEHGVLALCGMPDSEGKPVLLCSCNDNS--VRFYDLPSV 390 (393)
Q Consensus 331 ~dg~i~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~s~dg~--I~iwd~~s~ 390 (393)
..+.|.+.|+.+. .....+..+.....+..+.+..+ .++++...++. |.++++.++
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD----RVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS----CEEEEEEETTEEEEEEECEETT
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC----EEEEEEEECCEEEEEEEECCCC
Confidence 4677899998763 23445455555555667776543 26777777765 666766544
No 378
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=24.71 E-value=3.5e+02 Score=23.58 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=23.7
Q ss_pred cCCEEEEEecCCCCEEEEEeCCCcEEEEECCCCe
Q 016224 150 QKVVSGITLPSGSDKLYSGSKDETVRVWDCASGQ 183 (393)
Q Consensus 150 ~~~I~~i~~s~~~~~l~s~s~dg~v~iwd~~~~~ 183 (393)
-..-..|+|.|+++ |+.+..+|.|++++ .+++
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~ 59 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGK 59 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCc
Confidence 34567899999997 55556679999997 4555
No 379
>1bhu_A SMPI, metalloproteinase inhibitor; signal; NMR {Streptomyces nigrescens} SCOP: b.11.1.3
Probab=24.52 E-value=27 Score=22.72 Aligned_cols=11 Identities=55% Similarity=1.153 Sum_probs=8.9
Q ss_pred cccccCCCCCC
Q 016224 42 RAGKCNRFPCP 52 (393)
Q Consensus 42 ~~~~~~~~~~~ 52 (393)
|.-.|.||||-
T Consensus 60 rkvtcvrfpcy 70 (102)
T 1bhu_A 60 RKVTCVRFPCY 70 (102)
T ss_dssp CCCCCSSSCCC
T ss_pred eeeEEEeecce
Confidence 56679999994
No 380
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=23.63 E-value=1.9e+02 Score=27.70 Aligned_cols=39 Identities=18% Similarity=0.287 Sum_probs=28.0
Q ss_pred eEEEEECCCCcEEEEEecCC-cCCEEEEEecCCCCEEEEEe
Q 016224 130 FLHSWTVGDGFKLLTQLEGH-QKVVSGITLPSGSDKLYSGS 169 (393)
Q Consensus 130 ~i~vwd~~~~~~~~~~l~~h-~~~I~~i~~s~~~~~l~s~s 169 (393)
.+..++..++ ++...+.+. ...++.++|+||++.|+.+-
T Consensus 510 ~v~~~dp~tG-el~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 510 QMLCADPATG-EIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTTC-CEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred eEEEEeCCCC-eEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 5666676666 555555543 46799999999999887763
No 381
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=23.60 E-value=3.8e+02 Score=23.60 Aligned_cols=130 Identities=12% Similarity=0.036 Sum_probs=72.9
Q ss_pred CCCeEEEEECCC--CcEEEEEecC-----CcCCEEEEEecC--CCC-EEEEEeC---CCcEEEEECCCC--eE--EEEEe
Q 016224 127 KCKFLHSWTVGD--GFKLLTQLEG-----HQKVVSGITLPS--GSD-KLYSGSK---DETVRVWDCASG--QC--AGVIN 189 (393)
Q Consensus 127 ~dg~i~vwd~~~--~~~~~~~l~~-----h~~~I~~i~~s~--~~~-~l~s~s~---dg~v~iwd~~~~--~~--~~~~~ 189 (393)
.+|.|.++|.++ .......+.+ ..-....|.+.+ ++. +|+.+.. +.+|.+|+++.. .. +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999873 2111122332 234677777755 343 4555533 467788776543 22 22332
Q ss_pred cCC--c--eEEEEeCCCEEEEEc------------------CCeEEEEECCCCceeeecCCCCcEEEEEEeCC---EEEE
Q 016224 190 LGG--E--VGCMISEGPWIFIGV------------------TNFVKAWNTQTNTDLSLSGPVGQVYAMAVGND---LLFA 244 (393)
Q Consensus 190 ~~~--~--~~~~~~~~~~l~~~~------------------~~~i~v~d~~~~~~~~~~~~~~~v~~l~~~~~---~l~~ 244 (393)
... . -..+.+++.+.++.. .+.|..++. ++...+...-...+.++|+|+ ++++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEE
Confidence 211 1 133446777666542 124444544 333333344456789999998 4555
Q ss_pred EeCCCcEEEEEecc
Q 016224 245 GTQDGAILAWKFNV 258 (393)
Q Consensus 245 ~~~dg~I~vwd~~~ 258 (393)
-+..+.|..|++..
T Consensus 239 dt~~~~I~~~~~~~ 252 (355)
T 3sre_A 239 ELLAHKIHVYEKHA 252 (355)
T ss_dssp EGGGTEEEEEEECT
T ss_pred eCCCCeEEEEEECC
Confidence 56788999999874
No 382
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.05 E-value=1.8e+02 Score=27.82 Aligned_cols=38 Identities=18% Similarity=0.310 Sum_probs=26.9
Q ss_pred eEEEEECCCCcEEEEEecCC-cCCEEEEEecCCCCEEEEE
Q 016224 130 FLHSWTVGDGFKLLTQLEGH-QKVVSGITLPSGSDKLYSG 168 (393)
Q Consensus 130 ~i~vwd~~~~~~~~~~l~~h-~~~I~~i~~s~~~~~l~s~ 168 (393)
.+.+.+..++ ++.+.+.++ ..+++.++|+||++.|+..
T Consensus 510 ~~~~~~~~~g-~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPATG-EIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTC-CEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCC-eEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3455565666 555556554 4799999999999887765
No 383
>4a8x_B HOOK-like, isoform A; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Drosophila melanogaster}
Probab=21.12 E-value=31 Score=19.54 Aligned_cols=11 Identities=36% Similarity=0.954 Sum_probs=8.8
Q ss_pred ccccceeeeec
Q 016224 32 DTRQKVCNYWR 42 (393)
Q Consensus 32 ~~~~~~~~~~~ 42 (393)
.+..++|+||.
T Consensus 16 KT~a~P~IY~L 26 (40)
T 4a8x_B 16 KTKGTPCIYWL 26 (40)
T ss_dssp ECSSSSCCEEE
T ss_pred hccCCCceEEe
Confidence 35678999996
No 384
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.56 E-value=2.6e+02 Score=27.25 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=36.0
Q ss_pred EEEecCCCeEE-EEECCCCcEEEEEec--CCcCCEEEEEecCCC--CEEEEEeCCCcEEE
Q 016224 122 CMYGEKCKFLH-SWTVGDGFKLLTQLE--GHQKVVSGITLPSGS--DKLYSGSKDETVRV 176 (393)
Q Consensus 122 ~~~g~~dg~i~-vwd~~~~~~~~~~l~--~h~~~I~~i~~s~~~--~~l~s~s~dg~v~i 176 (393)
++.|+.+|.|. +-....+...+..+. ....+|..|.++++. .+|+.++.++.++|
T Consensus 418 ~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 418 MFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 45699999764 333333323333333 245789999999887 89998887765554
No 385
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=20.26 E-value=4.3e+02 Score=22.94 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=41.8
Q ss_pred ceEEeeEecC-c-EEEecCCCeEEEEECCCCcEEEEE---e----cCCcCCEEEEEecCC---CCEEEEEeC--------
Q 016224 111 DILCRNWVQG-N-CMYGEKCKFLHSWTVGDGFKLLTQ---L----EGHQKVVSGITLPSG---SDKLYSGSK-------- 170 (393)
Q Consensus 111 ~i~c~~~~~~-~-~~~g~~dg~i~vwd~~~~~~~~~~---l----~~h~~~I~~i~~s~~---~~~l~s~s~-------- 170 (393)
.-..++|.++ . ++++...|.|++++.+ + +.... + .........|+|+|+ +..|+.+..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-K-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-T-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-C-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 3467778776 4 6678888999999853 3 22111 1 122456789999996 555555432
Q ss_pred CCcEEEEECCC
Q 016224 171 DETVRVWDCAS 181 (393)
Q Consensus 171 dg~v~iwd~~~ 181 (393)
...|..|++..
T Consensus 97 ~~~v~r~~~~~ 107 (353)
T 2g8s_A 97 GTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEECT
T ss_pred eeEEEEEEECC
Confidence 23566666643
Done!