Query 016226
Match_columns 393
No_of_seqs 218 out of 1748
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:02:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogp_A Sulfite oxidase; oxidor 100.0 2E-107 8E-112 822.0 31.1 392 1-393 1-393 (393)
2 2a9d_A Sulfite oxidase; molybd 100.0 4E-106 1E-110 807.7 34.0 369 8-390 1-372 (372)
3 1sox_A Sulfite oxidase; oxidor 100.0 7E-103 2E-107 805.0 34.4 371 6-390 93-466 (466)
4 2blf_A SORA, sulfite\:cytochro 100.0 1.4E-98 5E-103 753.3 30.6 353 10-389 15-373 (373)
5 2bih_A Nitrate reductase [NADP 100.0 2.6E-98 9E-103 767.4 30.1 369 5-389 34-430 (474)
6 2bii_A Nitrate reductase [NADP 100.0 2E-97 7E-102 753.9 27.5 353 24-389 1-380 (424)
7 2xts_A Sulfite dehydrogenase; 100.0 2.4E-87 8E-92 674.3 25.4 345 5-388 28-380 (390)
8 1xdy_A Bacterial sulfite oxida 100.0 7.6E-53 2.6E-57 408.9 3.3 255 20-313 20-292 (298)
9 3pe9_A Fibronectin(III)-like m 99.1 2.2E-10 7.5E-15 93.9 7.6 75 269-365 3-79 (98)
10 3pdd_A Glycoside hydrolase, fa 97.9 1.5E-05 5.1E-10 72.3 7.2 74 269-365 3-79 (190)
11 3pdd_A Glycoside hydrolase, fa 97.3 0.00083 2.8E-08 60.7 9.6 77 266-364 92-170 (190)
12 4fj6_A Glycoside hydrolase fam 60.3 8.9 0.00031 39.5 5.2 49 268-316 322-370 (523)
13 1ms9_A Trans-sialidase; trans- 55.0 16 0.00056 38.7 6.2 54 266-319 186-239 (648)
14 1w0p_A Sialidase; hydrolase, n 54.0 13 0.00044 40.3 5.3 51 266-317 541-600 (781)
15 3a72_A EXO-arabinanase; arabin 51.4 24 0.00083 34.2 6.4 38 279-316 95-133 (355)
16 1so7_A Sialidase 2; neuraminid 47.9 27 0.00094 33.4 6.2 49 268-316 158-213 (382)
17 2ydt_A EXO-1,5-alpha-L-arabino 42.3 40 0.0014 32.9 6.4 38 279-316 100-138 (367)
18 3a72_A EXO-arabinanase; arabin 41.3 30 0.001 33.5 5.3 21 295-315 48-68 (355)
19 3tp4_A Computational design of 41.0 71 0.0024 32.5 8.1 77 266-362 373-458 (475)
20 4fj6_A Glycoside hydrolase fam 40.1 74 0.0025 32.5 8.3 16 300-315 401-416 (523)
21 4eib_A Glucoamylase; beta barr 39.4 28 0.00094 28.4 3.8 58 281-354 42-105 (109)
22 2ydt_A EXO-1,5-alpha-L-arabino 39.2 33 0.0011 33.4 5.2 21 295-315 53-73 (367)
23 2oxg_Z SOXZ protein; immunoglo 37.3 77 0.0026 25.4 6.3 55 296-364 46-100 (108)
24 1v8h_A Sulfur oxidation protei 37.1 84 0.0029 25.1 6.5 55 296-364 45-99 (107)
25 3sil_A Sialidase; glycosidase, 34.6 45 0.0016 32.6 5.4 49 267-316 169-220 (379)
26 2yuw_A Myosin binding protein 27.4 77 0.0026 23.9 4.7 20 346-365 75-94 (110)
27 1n10_A PHL P I, pollen allerge 26.2 1E+02 0.0035 28.3 5.9 56 289-362 165-221 (241)
28 2w20_A Sialidase A; secreted, 25.9 37 0.0013 34.1 3.1 46 272-317 249-302 (471)
29 1x5y_A Myosin binding protein 25.1 93 0.0032 23.5 4.8 21 346-366 76-96 (111)
30 2bf6_A Sialidase, EXO-alpha-si 25.1 66 0.0022 31.8 4.7 35 282-316 236-270 (449)
31 1w8o_A Bacterial sialidase; 3D 24.9 78 0.0027 32.1 5.4 20 297-316 188-207 (601)
32 2sli_A Intramolecular trans-si 24.4 87 0.003 33.1 5.7 47 268-317 456-506 (679)
33 2ddu_A Reelin; beta-jelly-roll 24.1 79 0.0027 31.3 4.9 17 299-315 101-117 (387)
34 3f6k_A Sortilin; protein sorti 23.5 64 0.0022 34.3 4.4 24 296-319 465-488 (685)
35 2kbg_A N-CAM 2, neural cell ad 23.0 80 0.0027 25.1 4.0 21 346-366 74-94 (114)
36 4a41_A GH89_CBM32-5, alpha-N-a 22.7 2.2E+02 0.0075 23.6 7.1 32 283-315 80-117 (161)
37 1bpv_A Titin, A71, connectin; 21.7 1E+02 0.0035 23.9 4.4 19 346-364 78-97 (112)
No 1
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=100.00 E-value=2.3e-107 Score=821.97 Aligned_cols=392 Identities=78% Similarity=1.321 Sum_probs=349.8
Q ss_pred CCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCccCccCCCCcCCCCceEeccCCCCcc-cCCCCeEEEEEeccCCceee
Q 016226 1 MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIV-DDIESYYVSICGLIENSKDL 79 (393)
Q Consensus 1 ~~~~~~~~~~~~~p~r~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~~P~~-~~~~~w~L~V~G~V~~p~~l 79 (393)
|||..++|+|+++|++++.|++++++|||+|||+..|.+++|||+++||+|||+++|.+ |. ++|+|+|+|+|++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~vP~i~d~-~~w~L~V~G~V~~p~~l 79 (393)
T 1ogp_A 1 MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHL-QSYSVTLTGLIQNPRKL 79 (393)
T ss_dssp -CCEECCSSSTTCCCCCTTCEEEETTTTEEECCHHHHTSCSSCCGGGSCEECSSCCCEESCS-TTCEEEEEESSSSCCEE
T ss_pred CCCccCCCccccCCCCCCCceEcCCCCCCCCCChHHcccCCcCCcccceEecCCCCCccCCC-CceEEEEEeEcCCCeEe
Confidence 99999999999999999999999999999999999998899999999999999999999 77 99999999999999999
Q ss_pred cHHHHhcCccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEE
Q 016226 80 FMRDIRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS 159 (393)
Q Consensus 80 tl~dL~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~ 159 (393)
|++||++||+++++++|+|+||+|++|++++++.|++|+.++|+++.|+||+|+|||++||++..+.....+.++|.|+|
T Consensus 80 tl~dL~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~a~W~GV~L~dlL~~aG~~~~a~~~~~~~~~V~f~g 159 (393)
T 1ogp_A 80 FIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVS 159 (393)
T ss_dssp EHHHHHTSCEEEEEEEEECTTTTHHHHHHHSCCCSCCCCSCCEEEEEEEEEEHHHHHHTTTCCTTCSCCTTCCCEEEEEE
T ss_pred eHHHHhcCCCEEEEEEEEecCCccccccccccccCccccccceecceEEeeEHHHHHHhcCCCcccccccCcceEEEEEE
Confidence 99999999999999999999999999998899999999999999999999999999999999854211112336999999
Q ss_pred ccCccccCCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeee
Q 016226 160 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK 239 (393)
Q Consensus 160 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~ 239 (393)
+|.....++.+|.++|||+++|++++++||||+||||||+++|||||||||||++|++|||||++|+|+++++++|||++
T Consensus 160 ~D~~~~~~~~~Y~~sipl~~al~~~~~vlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwL~~I~v~~~~~~~~w~~~ 239 (393)
T 1ogp_A 160 VDRCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQK 239 (393)
T ss_dssp SCCCGGGTTCCCEEEEEHHHHHCGGGCCEEEEEETTEECCTTTTTTCEEECTTSCGGGSCCSEEEEEEESSCCCCHHHHS
T ss_pred cCcccccCCCCeEEEeEHHHHhCCCCCEEEEeCcCCeECCcccCceEEEEeCccccceeeeeccEEEEEecCCCCcceec
Confidence 99654444457999999999998644799999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccCCCCCCCCccceeceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCc
Q 016226 240 DYKMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 319 (393)
Q Consensus 240 ~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~ 319 (393)
+|+++++.++++...+.+..+|++|++||+|++|.++++|..|.++|+||||||||++|+|||||+|||+||+.|+|..+
T Consensus 240 ~Y~~~p~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~ 319 (393)
T 1ogp_A 240 DYKMFPPSVNWDNINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQE 319 (393)
T ss_dssp SSCCCCTTCCTTTCCGGGSCCCCSCCCEEEECSSCSEEEECSEEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEESS
T ss_pred cccccCCCCCcccccCCCCceeeeecccEEEeCCCCCCEecCCcEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeeccCc
Confidence 99999988877766666677999999999999999999999889999999999988899999999999999999999874
Q ss_pred CCCCccccCCCCCceeeEEeEEEEECCCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEeecCC
Q 016226 320 TGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 393 (393)
Q Consensus 320 ~~~p~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~n~~~~v~v~v~~~~~ 393 (393)
+..++.....+..+|||++|+++|++.+.++|+|||||++||+||+....+||++||+||+||+|+|+|.++++
T Consensus 320 ~~~~~~~~~~~~~~~aW~~W~~~~~~~~~~~i~vRA~D~~gn~QP~~~~~~wN~~G~~~N~~~~v~v~~~~~~~ 393 (393)
T 1ogp_A 320 PGKQYISEHSSSDKWAWVLFEATIDVSQTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393 (393)
T ss_dssp SSSCCCSSSTTSCTTSCEEEEEEEEESSCEEEEEEEEETTCCBCCSCHHHHCCTTCCCCCCCEEEEEEEC----
T ss_pred CccccccccccCCCCEEEEEEEEEecCCCeEEEEEEEcCCCCcCCCCccCcccCCCcccCCEEEEEEECCCCCC
Confidence 31111111122358999999999998557899999999999999998556799999999999999999988875
No 2
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=100.00 E-value=4.1e-106 Score=807.74 Aligned_cols=369 Identities=47% Similarity=0.867 Sum_probs=338.9
Q ss_pred CCCCCCCCCCCceeecCCCCCCCCCCccCccCCCCcCCCCceEeccCCCCcccCCCCeEEEEEeccCCceeecHHHHh-c
Q 016226 8 SSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIR-M 86 (393)
Q Consensus 8 ~~~~~~p~r~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~~P~~~~~~~w~L~V~G~V~~p~~ltl~dL~-~ 86 (393)
|+|+++|.|++.|++++++|||+|||++.|.+++|||+++||||||+++|.++. ++|+|+|+|+|++|++||++||+ +
T Consensus 1 ~p~~~~p~r~~~l~~~~~~P~n~E~p~~~l~~~~iTP~~~~yvr~h~~vP~id~-~~w~L~V~G~V~~p~~ltl~dL~~~ 79 (372)
T 2a9d_A 1 DPFAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNELFFTRNHLPVPAVEP-SSYRLRVDGPGGRTLSLSLAELRSR 79 (372)
T ss_dssp CTTTTCCCCCTTSEEEETTTTEEECCHHHHTSSSSCCTTTSCEECSSCCCCCCT-TTCEEEEECC---CEEEEHHHHHHH
T ss_pred CCCCcCCCCCCCceEcCCCCCccCCChHHhccCCcCCchheeEecCCCCCcccC-CCeEEEEEeEcCCceEEeHHHHHhh
Confidence 689999999999999999999999999999899999999999999999999987 99999999999999999999999 9
Q ss_pred CccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEccCcccc
Q 016226 87 LRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEE 166 (393)
Q Consensus 87 lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~ 166 (393)
||+++++++|+|+||+|++|++.+++.|.+|+.++|+++.|+||+|+|||++||++... .++++|.|+|+|.. .
T Consensus 80 lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~w~~gav~~~~W~GV~L~dlL~~ag~~~~~----~~a~~V~~~~~D~~--~ 153 (372)
T 2a9d_A 80 FPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEEL----QGEWHVCFEGLDAD--P 153 (372)
T ss_dssp SCCEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCC----SSCCEEEEEEEEEC--T
T ss_pred CCCeEEEEEEEecCCchhhccccccccccccccCceecceEEeEEHHHHHHhcCCCcCC----CCcEEEEEEecCCC--C
Confidence 99999999999999999999988999999999999999999999999999999997321 26899999999832 2
Q ss_pred CCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeeccccCCC
Q 016226 167 NGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPP 246 (393)
Q Consensus 167 ~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y~~~~~ 246 (393)
++.+|.++|||+++|++.+++||||+||||||+++|||||||||||++|++|||||++|+|+++++++|||+++|+.++|
T Consensus 154 ~~~~Y~~sipl~~a~dp~~d~lLA~~mNGepL~~~hG~PlRlVvPg~~G~ksvKwl~~I~v~~~~~~~~w~~~~Y~~~~p 233 (372)
T 2a9d_A 154 GGAPYGASIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGFSP 233 (372)
T ss_dssp TCCEEEEEEEHHHHHCGGGCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSCCCCT
T ss_pred CCCCeEEEeEHHHHhCCCCCEEEEECCCCeECCcccCceEEEEecchhheeecceeeEEEEeccCCCCcceecceeEcCC
Confidence 23369999999999986558999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCCCccceeceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCccc
Q 016226 247 SVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIA 326 (393)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~~ 326 (393)
..++++.+|...++|++|++||+|++|.+|++|+.|.++|+||||||||++|+|||||+|||+||+.|+|..++.
T Consensus 234 ~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~----- 308 (372)
T 2a9d_A 234 CVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKA----- 308 (372)
T ss_dssp TCCTTTCCGGGSCCCCBCCCEEEEEESCTTCEECSEEEEEEEEEECSTTCCEEEEEEESBSSSSCEECEECSCCC-----
T ss_pred CCCccccccccCcccccccccEEEecCCCCCEeccceEEEEEEEEcCCCCCEEEEEEEcCCCCcceEeEcCCccc-----
Confidence 887777778778899999999999999999999999999999999998999999999999999999999987642
Q ss_pred cCCCCCceeeEEeEEEEECC-C-ccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEee
Q 016226 327 DHMSSDKWAWVFFEVIIDIP-H-STQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGH 390 (393)
Q Consensus 327 ~~~~~~~~aW~~W~~~~~~~-~-~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~n~~~~v~v~v~~ 390 (393)
...++|||++|+++|++. + .++|+|||||++||+||+....+||++||+||+||+|+|+|.+
T Consensus 309 --~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~~QP~~~~~~wn~~G~~~n~~~~v~v~v~~ 372 (372)
T 2a9d_A 309 --PPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSVQD 372 (372)
T ss_dssp --CTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCCBCCSCSGGGCCTTCCCCCSCEEEEEEECC
T ss_pred --ccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCCcCCCCccCCcCCCCcccceEEEEEEEEeC
Confidence 123489999999999874 3 4799999999999999998767899999999999999999964
No 3
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=100.00 E-value=6.8e-103 Score=805.02 Aligned_cols=371 Identities=47% Similarity=0.865 Sum_probs=343.6
Q ss_pred CCCCCCCCCCCCCceeecCCCCCCCCCCccCccCCCCcCCCCceEeccCCCCcccCCCCeEEEEEeccCCceeecHHHHh
Q 016226 6 APSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIR 85 (393)
Q Consensus 6 ~~~~~~~~p~r~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~~P~~~~~~~w~L~V~G~V~~p~~ltl~dL~ 85 (393)
..++|+++|.|++.|++++++|||+|||++.|.+++|||+++||||||+++|.++. ++|+|+|+|+|++|++||++||+
T Consensus 93 ~~~~~~~~p~~~~~l~~~~~~p~n~E~p~~~l~~~~iTp~~~~yvr~h~~vP~id~-~~w~L~V~G~V~~p~~ltl~dL~ 171 (466)
T 1sox_A 93 AQDPFAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNELFFTRNHLPVPAVEP-SSYRLRVDGPGGGTLSLSLAELR 171 (466)
T ss_dssp SSCTTTTCCCCCTTSEEEETTTTEEECCHHHHTSSSSCCGGGSCEECSSCCCCCCG-GGCEEEEECTTSCCEEEEHHHHH
T ss_pred ccCccccCCCcCcceEEccCCCcccCCChHHhccccccccccEEEccCCCCCccCC-CCeEEEEecccCCceEeeHHHHH
Confidence 46899999999999999999999999999999899999999999999999999987 99999999999999999999999
Q ss_pred -cCccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEccCcc
Q 016226 86 -MLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCK 164 (393)
Q Consensus 86 -~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~ 164 (393)
+||+++++++|+|+||+|++|++.+++.|.+|+.++|+++.|+||+|+|||++||++... .++++|.|+|+|..
T Consensus 172 ~~lp~~~~~~~l~C~gN~r~~~~~~~~v~G~~W~~gai~~~~W~Gv~L~dlL~~ag~~~~~----~~a~~V~~~~~D~~- 246 (466)
T 1sox_A 172 SRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEEL----QGEWHVCFEGLDAD- 246 (466)
T ss_dssp HHSCEEEEEEEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCC----SSCCEEEEEEEEEC-
T ss_pred hhCCCeEEEEEEEecCCCcccccccccccccccccCceecceEEEEEHHHHHHHcCCCCCC----CCcEEEEEEecCCC-
Confidence 999999999999999999999988899999999999999999999999999999997421 26899999999832
Q ss_pred ccCCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeeccccC
Q 016226 165 EENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMF 244 (393)
Q Consensus 165 ~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y~~~ 244 (393)
.++.+|.++|||+++|++++++||||+||||||+++|||||||||||++|++|||||++|+|+++++++|||+++|+.+
T Consensus 247 -~~~~~Y~~sipl~~a~~p~~~~lLA~~mNGepL~~~hG~PlRlvvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y~~~ 325 (466)
T 1sox_A 247 -PGGAPYGASIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGF 325 (466)
T ss_dssp -TTCCEEEEEEEHHHHHCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCSHHHHSSSCCC
T ss_pred -CCCCCEEEEeEHHHHhCCCCCEEEEECcCCeECChhcCceEEEEecchhheeeeeeccEEEEEeCCCCCcceecCceec
Confidence 2233699999999999875689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCCCCccceeceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCc
Q 016226 245 PPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPY 324 (393)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~ 324 (393)
+|..++++.+|...++|++|++||+|++|.+|++|+.|.++|+||||||||++|+|||||+|||+||+.|+|..++.
T Consensus 326 ~p~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sggg~~I~rVEVS~DgG~tW~~A~l~~~~~--- 402 (466)
T 1sox_A 326 SPCVDWDTVDYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKA--- 402 (466)
T ss_dssp CTTCCTTTCCGGGSCCCCBCCCEEEEEESCTTCEECSEEEEEEEEEECSTTCCEEEEEEESBTTSSCEECEECSCCC---
T ss_pred CCCCCccccccccccccccccccEEEecCCCCCEeccceEEEEEEEEcCCCCCEEEEEEEcCCCCcceEeecCCccc---
Confidence 99887777778778899999999999999999999999999999999998999999999999999999999987642
Q ss_pred cccCCCCCceeeEEeEEEEECC-C-ccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEee
Q 016226 325 IADHMSSDKWAWVFFEVIIDIP-H-STQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGH 390 (393)
Q Consensus 325 ~~~~~~~~~~aW~~W~~~~~~~-~-~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~n~~~~v~v~v~~ 390 (393)
+..++|||++|+++|++. + .++|+|||||++||+||+....+||++||+||+||+|+|+|.+
T Consensus 403 ----~~~~~~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~~QP~~~~~~wn~~G~~~n~~~~v~v~v~~ 466 (466)
T 1sox_A 403 ----PPGRAWAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSVQD 466 (466)
T ss_dssp ----CTTCCCSCEEEEEEEEECTTCEEEEEEEEEETTCCBCCSCSGGGCCTTCCCCCSCEEEEEEECC
T ss_pred ----ccCCccEEEEEEEeEEcCCCCEEEEEEEEEcCCCCcCCCCccCCcCCCCcccceEEEEEEEEeC
Confidence 123489999999999874 3 4799999999999999998777899999999999999999963
No 4
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=100.00 E-value=1.4e-98 Score=753.33 Aligned_cols=353 Identities=29% Similarity=0.500 Sum_probs=315.7
Q ss_pred CCCCCCCCCceeecCCCCCCCCCCccCccCCCCcCCCCceEecc-CCCCc-ccCCCCeEEEEEeccCCceeecHHHHhc-
Q 016226 10 YSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNH-GPIPI-VDDIESYYVSICGLIENSKDLFMRDIRM- 86 (393)
Q Consensus 10 ~~~~p~r~~~l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h-~~~P~-~~~~~~w~L~V~G~V~~p~~ltl~dL~~- 86 (393)
|...| |++.|+++.++|||+|||++.|.+++|||+++||+||| +++|. +|. ++|+|+|+|+|++|++||++||++
T Consensus 15 ~~~~p-~~~~li~~~~~p~n~e~p~~~l~~~~iTP~~~~yvr~h~~~vP~~id~-~~w~L~V~G~V~~p~~ltl~dL~~~ 92 (373)
T 2blf_A 15 LVMYP-GKRPLIGLTARPPQLETPFSVFDEGLITPNDAFFVRYHLAGIPLEIDP-DAFRLEIKGKVGTPLSLSLQDLKND 92 (373)
T ss_dssp EECCT-TCCCEEEEETTTTEEECCGGGGGSCSSCCGGGCCBCCSCSBCCCEECT-TTCCEEEEESBSSCEEECHHHHHHH
T ss_pred cccCC-CCCCcEEecCCCCcCCCChHHhCccccCChhheEEEecCCCCccccCC-CCeEEEEEeEcCCceEEeHHHHhcc
Confidence 44443 68899999999999999999888899999999999999 67998 877 999999999999999999999998
Q ss_pred CccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEccCcccc
Q 016226 87 LRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEE 166 (393)
Q Consensus 87 lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~ 166 (393)
||+++++++|+|++|+|++|. +++.|.+|+.|+|+++.|+||+|+|||++||++. ++++|.|+|+|.....
T Consensus 93 lp~~~~~~~l~C~~N~R~~~~--~~~~G~~W~~gai~~~~W~GV~L~dlL~~ag~~~-------~a~~V~~~~~D~~~~~ 163 (373)
T 2blf_A 93 FPASEVVAVNQCSGNSRGFVE--PRVGGGQLANGAMGNARWRGVPLKAVLEKAGVQA-------GAKQVTFGGLDGPVIP 163 (373)
T ss_dssp SCCEEEEEEEECTTTTGGGCS--SCCSSCCCCSCSEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEESCBCSST
T ss_pred CCCeEEEEEEEeccCcccccc--ccccCCCccccceeeeEEEEEEHHHHHHhcCCCC-------CCcEEEEEecCCCCCC
Confidence 999999999999999999985 7889999999999999999999999999999985 6899999999943222
Q ss_pred CCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeeccccCCC
Q 016226 167 NGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPP 246 (393)
Q Consensus 167 ~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y~~~~~ 246 (393)
+...|.++|||+++|++ ++||||+||||||+++|||||||||||++|++|||||++|+|+++++++|||+++|++...
T Consensus 164 ~~~~Y~~sipl~~a~~~--~~lLA~~mNGepL~~~hG~PlRlVvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y~~p~~ 241 (373)
T 2blf_A 164 ETPDFVKALSIDHATDG--EVMLAYSMNGADLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRIPDN 241 (373)
T ss_dssp TSCCCEEEEEHHHHTSS--CSEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCHHHHTSSEEESS
T ss_pred CCCCEEEEEEHHHhcCC--CEEEEEeeCCeECCcccCCceEEEecCccccccceeccEEEEEecCCCCcceecccccCCc
Confidence 22239999999999986 8999999999999999999999999999999999999999999999999999999998322
Q ss_pred CCCcccCCC--CCCCCccceeceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCc
Q 016226 247 SVNWDNINW--KSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPY 324 (393)
Q Consensus 247 ~~~~~~~~~--~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~ 324 (393)
........| .+..+|++|++||+|++|.++++++.|.++|+||||+ ||++|+|||||+|||+||+.|+|..+..
T Consensus 242 ~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~~-Gg~~I~rVEVS~DgG~tW~~A~l~~~~~--- 317 (373)
T 2blf_A 242 ACACTEPGKAPTATIPINRFDVRSFITNVENGASVKAGEVPLRGIAFD-GGYGITQVSVSADAGKSWTNATLDPGLG--- 317 (373)
T ss_dssp TTCCCSTTCCCSSEEECCBCCCEEEECSCCTTEEECSEEEEEEEEEEC-SSSCEEEEEEESSTTSSCEECEECCCSC---
T ss_pred cccccCCCCcccccccceecccCEEEEecCCCCEeccceEEEEEEEEc-CCCCEEEEEEEeCCCCCceEeEeCCCCC---
Confidence 111112223 3456799999999999999999999899999999995 5789999999999999999999987653
Q ss_pred cccCCCCCceeeEEeEEEEEC-CCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEe
Q 016226 325 IADHMSSDKWAWVFFEVIIDI-PHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG 389 (393)
Q Consensus 325 ~~~~~~~~~~aW~~W~~~~~~-~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~n~~~~v~v~v~ 389 (393)
+|||++|+++|+. .+.++|+|||||++||+||+... ||++||+||+||+|+|+|.
T Consensus 318 --------~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~~QP~~~~--wn~~G~~~N~~~~v~v~v~ 373 (373)
T 2blf_A 318 --------KYSFRGWKAVLPLTKGDHVLMCRATNARGETQPMQAT--WNPAGYMRNVVEATRVIAA 373 (373)
T ss_dssp --------TTSCEEEEEEEEECSEEEEEEEEEEETTSCCCCSSCC--CCTTCCCCCCCEEEEEEEC
T ss_pred --------CCeEEEEEEEEEcCCCcEEEEEEEEcCCCCcCCCccc--ccccccccCcEEEEEEEEC
Confidence 7999999999987 45579999999999999998765 9999999999999999984
No 5
>2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta}
Probab=100.00 E-value=2.6e-98 Score=767.42 Aligned_cols=369 Identities=33% Similarity=0.634 Sum_probs=328.0
Q ss_pred CCCCCCCCCCCCCCcee-ecCCCCCCCCCCccCcc-CCCCcCCCCceEeccCCCCccc--CCCCeEEEEEeccCCceeec
Q 016226 5 TAPSSYSQEPPRHPILQ-INSKEPFNAEPPRSALI-SSYVTPVDFFYKRNHGPIPIVD--DIESYYVSICGLIENSKDLF 80 (393)
Q Consensus 5 ~~~~~~~~~p~r~~~l~-~~~~~P~n~e~p~~~l~-~~~iTP~~~~yvr~h~~~P~~~--~~~~w~L~V~G~V~~p~~lt 80 (393)
.|||.|.. |++.|| +++++|||+|||++.|. .++|||+++||+|||+++|.++ +.++|+|+|+|+|++|++||
T Consensus 34 ~tpd~~~~---r~~~li~~~~~~P~n~E~p~~~L~~~~~iTP~~~~yvr~h~~vP~i~~~d~~~w~L~V~G~V~~p~~lt 110 (474)
T 2bih_A 34 KTKDNFVA---RDPDLLRLTGSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIK 110 (474)
T ss_dssp TSTTTTCC---CCTTSEESSTTSSCEEECCHHHHHHTCSSCCGGGSCEECSSCCCCCCTTTGGGCEEEEEESBSSCEEEE
T ss_pred CCCccccC---CCcccEEecCCCCccCCCCHHHHhcccccCCCccEEEEecCCCCccccCCCCCeEEEEEeecCCceEee
Confidence 57899864 999998 45689999999999997 5899999999999999999986 23899999999999999999
Q ss_pred HHHHhc-CccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEE
Q 016226 81 MRDIRM-LRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVS 159 (393)
Q Consensus 81 l~dL~~-lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~ 159 (393)
++||++ ||+++++++|+|+||+|++|++++++.|++|+.++|+++.|+||+|+|||++||++. ++++|.|+|
T Consensus 111 l~dL~~~lp~~~~~~~l~CvgN~r~e~~~v~~~~G~~W~~~avs~a~WtGV~L~dlL~~aG~~~-------~A~~V~f~g 183 (474)
T 2bih_A 111 LSDIMEQFDIYSTPVTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSK-------RARFVWMEG 183 (474)
T ss_dssp HHHHHHHSCCEEEEEEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHTCBCT-------TCCEEEEEE
T ss_pred HHHHhhcCCCeEEEEEEEccCCccccccccccccccccccCceeeeEEEeEEHHHHHHhcCCCC-------CceEEEEEe
Confidence 999997 999999999999999999998889999999999999999999999999999999985 589999999
Q ss_pred ccCccccCCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeee
Q 016226 160 IDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQK 239 (393)
Q Consensus 160 ~D~~~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~ 239 (393)
+|... .++|.++|||+++|+++.++||||+||||||+++|||||||||||++|++|||||++|+|++++++||||.+
T Consensus 184 ~D~~~---~g~Y~~sipl~~ald~~~dvlLA~~mNGepLp~~hG~PlRLVvPg~~G~rsvKWL~~Iev~~~~~~g~~~~~ 260 (474)
T 2bih_A 184 ADNPA---NGAYGTCIRLSWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYF 260 (474)
T ss_dssp SCCCT---TSSCEEEEEHHHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBBGGGSCSSEEEEEEESSCCCCHHHHH
T ss_pred cCCCC---CCCeEEEEEHHHHhCcCCCEEEEEeeCCeECCccCCCeeEEEecccccCCccccCCEEEEEeccCCCceeee
Confidence 98432 237999999999999755799999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccC----C-CCC-CCCccceeceEEEEEecCCCccc--CCcEEEEEEEEeCCCCCeEEEEEEeCCCCCc
Q 016226 240 DYKMFPPSVNWDNI----N-WKS-RRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNW 311 (393)
Q Consensus 240 ~Y~~~~~~~~~~~~----~-~~~-~~~i~~~~v~S~I~~P~~g~~v~--~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW 311 (393)
+|+++++.++++.+ . |.+ ..+|++|+|||+|++|.++++|+ .|+++|+||||||||++|+|||||+|||+||
T Consensus 261 ~yrv~p~~~~~~~~~~~~~~W~~~~~~i~~~~vnS~I~~P~~~e~v~~~~g~~~v~GyA~sGGGr~I~RVEVS~DgG~TW 340 (474)
T 2bih_A 261 DNRVLPTMVTPEMAKSDDRWWKDERYAIYDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSW 340 (474)
T ss_dssp SSBCCCTTCCHHHHHTCGGGGSCGGGBCCBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSSSSSC
T ss_pred cccccCCCCCccccccccCccccCcceeeccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCc
Confidence 99999887765421 2 543 45899999999999999999996 4589999999999899999999999999999
Q ss_pred eEeecCCcCCCCcc-c----------c-CCCCCceeeEEeEEEEEC---CCccEEEEEeEeCCCCCCCCCcccccccccC
Q 016226 312 VEASRYQKTGIPYI-A----------D-HMSSDKWAWVFFEVIIDI---PHSTQIVAKAVDTAANVQPESVETIWNLRGV 376 (393)
Q Consensus 312 ~~A~l~~~~~~p~~-~----------~-~~~~~~~aW~~W~~~~~~---~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~ 376 (393)
+.|+|..++. |+. + + .-..++|||++|+++|++ .++++|+|||||++||+||+. .+||++||
T Consensus 341 ~~A~L~~pe~-~~r~~~~~~~~g~~~~~~~~~~~~~W~~W~~~~~~~~~~g~~~I~vRA~D~sgn~QP~~--~~WN~~G~ 417 (474)
T 2bih_A 341 KLADIDYPED-RYREAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSELARSKDILIRGMDERMMVQPRT--MYWNVTSM 417 (474)
T ss_dssp EECEEECTHH-HHHHTCCEEETTEEECGGGCCCCCSCEEEEEEEEHHHHHTCSEEEEEEEETTCCBCCSS--CCCCTTCC
T ss_pred eECcccCccc-cccccccccccccccccccccccceeeeeEEEEecccCCCceEEEEEEEcCCCCcCCCC--cccccccc
Confidence 9999987641 110 0 0 001247999999999986 467899999999999999986 45999999
Q ss_pred CCCceEEEEEEEe
Q 016226 377 LNTSWHRVQVRVG 389 (393)
Q Consensus 377 ~~n~~~~v~v~v~ 389 (393)
+||+||||+|++.
T Consensus 418 ~nN~~~rV~v~~~ 430 (474)
T 2bih_A 418 LNNWWYRVAIIRE 430 (474)
T ss_dssp SCCSCEEEEEEEE
T ss_pred ccCcEEEEEEEec
Confidence 9999999999974
No 6
>2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta}
Probab=100.00 E-value=2e-97 Score=753.86 Aligned_cols=353 Identities=33% Similarity=0.642 Sum_probs=312.8
Q ss_pred CCCCCCCCCCccCcc-CCCCcCCCCceEeccCCCCccc--CCCCeEEEEEeccCCceeecHHHHhc-CccEeEEEEEEee
Q 016226 24 SKEPFNAEPPRSALI-SSYVTPVDFFYKRNHGPIPIVD--DIESYYVSICGLIENSKDLFMRDIRM-LRKYNITATLQCA 99 (393)
Q Consensus 24 ~~~P~n~e~p~~~l~-~~~iTP~~~~yvr~h~~~P~~~--~~~~w~L~V~G~V~~p~~ltl~dL~~-lp~~~~~~~l~C~ 99 (393)
+++|||+|||++.|+ +++|||+++||+|||+++|.++ +.++|+|+|+|+|++|++||++||++ ||+++++++|+|+
T Consensus 1 g~~P~N~E~P~~~L~~~~~iTP~~~~yvr~h~~vP~i~~~d~~~w~L~V~G~V~~p~~ltl~dL~~~lp~~~~~~~l~C~ 80 (424)
T 2bii_A 1 GSHPFNSEPPLTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIKLSDIMEQFDIYSTPVTMVCA 80 (424)
T ss_dssp ---CEEECCCHHHHHHTCSSCCGGGSCEEESSCCCCCCGGGGGGCEEEEEESBSSCEEEEHHHHHHHSCCEEEEEEEECT
T ss_pred CCCCccCCCCHHHHhhCCccCCchheEEecCCCCCccCcCCCCCeEEEEEeecCCceEeeHHHHhccCCCeEEEEEEEec
Confidence 468999999999997 5899999999999999999986 23899999999999999999999997 9999999999999
Q ss_pred cCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEccCccccCCCCeEEEEechh
Q 016226 100 GNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQ 179 (393)
Q Consensus 100 gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~sipl~~ 179 (393)
||+|++|++++++.|.+|+.++|+++.|+||+|+|||++||++. ++++|.|+|+|... .++|.++|||++
T Consensus 81 gN~r~~~~~~~~~~G~~W~~~ai~~a~WtGV~L~dlL~~ag~~~-------~a~~V~f~~~D~~~---~g~Y~~sipl~~ 150 (424)
T 2bii_A 81 GNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSK-------RARFVWMEGADNPA---NGAYGTCIRLSW 150 (424)
T ss_dssp TTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEESCCCT---TSSCEEEEEHHH
T ss_pred CCccccccccccccccccccCceEeeEEEeeEHHHHHHhcCCCC-------CceEEEEEecCCCC---CCCEEEEEEHHH
Confidence 99999998889999999999999999999999999999999985 68999999998432 237999999999
Q ss_pred hcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeeccccCCCCCCcccC----C-
Q 016226 180 ATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI----N- 254 (393)
Q Consensus 180 ~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y~~~~~~~~~~~~----~- 254 (393)
+|+++.++||||+||||||+++|||||||||||++|++|||||++|+|+++++++|||.++|+++++.++++.+ .
T Consensus 151 a~d~~~dvlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwl~~I~v~~~~~~g~~~~~~yrv~p~~~~~~~~~~~~~~ 230 (424)
T 2bii_A 151 CMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPTMVTPEMAKSDDRW 230 (424)
T ss_dssp HTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSBCCCTTCCHHHHHHCGGG
T ss_pred HhCCCCCEEEEEeeCCcCCCcccCCceEEEecccccCCccccCcEEEEEeccCCCceeeecccccCCCCCccccccccCc
Confidence 99975579999999999999999999999999999999999999999999999999999999999887765421 2
Q ss_pred CCC-CCCccceeceEEEEEecCCCccc--CCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCcc-c--cC
Q 016226 255 WKS-RRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYI-A--DH 328 (393)
Q Consensus 255 ~~~-~~~i~~~~v~S~I~~P~~g~~v~--~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~-~--~~ 328 (393)
|.+ ..+|++|+|||+|++|.++++|+ .|+++|+||||||||++|+|||||+|||+||+.|+|..++. |+. + +.
T Consensus 231 w~~~~~~i~~l~v~S~I~~P~~~~~v~~~~g~~~v~GyA~sGGGr~I~rVEVS~DgG~tW~~A~L~~pe~-~~~~~~~~~ 309 (424)
T 2bii_A 231 WKDERYAIYDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSWKLADIDYPED-RYREAGYFR 309 (424)
T ss_dssp GSCGGGBCCBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEECTHH-HHHHTCSEE
T ss_pred cccCcceecccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeEccCcCC-ccccccccc
Confidence 433 45899999999999999999996 45899999999998999999999999999999999987642 110 0 00
Q ss_pred CC---------CCceeeEEeEEEEEC---CCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEe
Q 016226 329 MS---------SDKWAWVFFEVIIDI---PHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG 389 (393)
Q Consensus 329 ~~---------~~~~aW~~W~~~~~~---~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~n~~~~v~v~v~ 389 (393)
.+ .++|+|++|+++|++ .+.++|+|||||++||+||+. .+||++||+||+||+|+|++.
T Consensus 310 ~~g~~~~~~~~~~~~~W~~W~~~~~~~~~~g~~~I~vRA~D~~gn~QP~~--~~WN~~G~~nN~~~rv~v~~~ 380 (424)
T 2bii_A 310 LFGGLVNVCDRMSCLCWCFWKLKVPLSELARSKDILIRGMDERMMVQPRT--MYWNVTSMLNNWWYRVAIIRE 380 (424)
T ss_dssp ETTEEECGGGCCCCCSCEEEEEEEEHHHHHTCSEEEEEEEETTCCBCCSS--CCCCTTCCSCCSCEEEEEEEE
T ss_pred ccccccccccccccceeeeeEEEEecccCCCceEEEEEEEcCCCCcCCCC--ccccccccccCcEEEEEEEec
Confidence 01 247999999999986 467899999999999999986 459999999999999999974
No 7
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus}
Probab=100.00 E-value=2.4e-87 Score=674.26 Aligned_cols=345 Identities=26% Similarity=0.375 Sum_probs=303.6
Q ss_pred CCCCCCCCCCCCCCceeecC-CCCCCCCCCccCccCCCCcCCCCceEeccCCCCcccCCCCeEEEEEeccCCceeecHHH
Q 016226 5 TAPSSYSQEPPRHPILQINS-KEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRD 83 (393)
Q Consensus 5 ~~~~~~~~~p~r~~~l~~~~-~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~~P~~~~~~~w~L~V~G~V~~p~~ltl~d 83 (393)
-.|++|.....|........ ..+.++|+|+..| .++|||+++||+|||+++|.+|. ++|+|+|+|+|++|++||++|
T Consensus 28 g~~~~~~~~~~r~~~~~~~~~~~~~~~~~p~~~l-~~~iTP~~~~y~r~h~~vP~id~-~~w~L~V~G~V~~p~~ltl~d 105 (390)
T 2xts_A 28 GLPIHFESHVKRQYVEWLTESPVSSINFTPIHAL-EGTITPQGCAFERHHSGAIELSK-QDYRLMINGLVEKPLVFTFED 105 (390)
T ss_dssp CCCCGGGTTSSCBCCGGGCSBTTBEECBCCTTTC-CSSCCCGGGSCCEESSCBCCCCT-TTCCEEEEESBSSCEEECHHH
T ss_pred CCCCcccccceeeccCccccccccccccCChhhc-cCCcCCCCceEEecCCCCCccCC-CCeEEEEEeEcCCCeEEcHHH
Confidence 35566666555544222222 5556778999988 68999999999999999999987 899999999999999999999
Q ss_pred HhcCccEeEEEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEccCc
Q 016226 84 IRMLRKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKC 163 (393)
Q Consensus 84 L~~lp~~~~~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~ 163 (393)
|++||+++++++|+|+||+|.+|+. +++.|.+|+.|+|+++.|+||+|+|||++||++. ++++|.|+|+|.
T Consensus 106 L~~lp~~~~~~~l~C~gn~r~~w~~-~~~~g~~w~~g~i~~~~W~GV~L~dlL~~ag~~~-------~a~~V~~~~~Dg- 176 (390)
T 2xts_A 106 LLRFPRTTTTAFCECAANGGMEWGG-AQLEGCQYTQGMIHNMEYVGVPLSVLLAEAGVKP-------EGKWLYAEGADA- 176 (390)
T ss_dssp HTTSCCEEEEEEEECTTTTGGGTTS-CCCSSHHHHHCSEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEESST-
T ss_pred HhcCCCEEEEEEEEecCCccccccc-ccccccccccCceeeeEEEEEEHHHHHHhcCCCC-------CceEEEEEecCC-
Confidence 9999999999999999999988764 3478999999999999999999999999999985 589999999981
Q ss_pred cccCCCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeecccc
Q 016226 164 KEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKM 243 (393)
Q Consensus 164 ~~~~~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y~~ 243 (393)
..|.++|||+++|+ ++||||+||||||+++|||||||||||++|.+|||||++|+|+++++++|||+.+|+.
T Consensus 177 -----~~y~~sipl~~a~~---~~lLA~~mNGepL~~~hG~PlRLVvPg~~G~~svKwl~~I~v~~~~~~~~~~~~~y~~ 248 (390)
T 2xts_A 177 -----SSNGRSFPMEKVMD---DVMLAFFANGEALRKEHGYPARLVVPGWEGNMWVKWVRRLGIYDKAVESREETSKYTD 248 (390)
T ss_dssp -----TCCCEEEEHHHHHH---HCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCGGGTTSSCE
T ss_pred -----CeEEEEEEHHHHhc---CcEEEEeECCeECCccCCCceEEEecCccCcccceeccEEEEEecCCCCchhhccccc
Confidence 23999999999997 6999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccCCCCCCCCccceeceEEEEEecCCCccc--CCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCC
Q 016226 244 FPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTG 321 (393)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~g~~v~--~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~ 321 (393)
+.+...+ ..+++.|+|||+|+.|.+++.|+ .|.++|+||||+|+| +|+|||||+|||+||+.|+|..+..
T Consensus 249 ~~~~~~~-------~~~~~~~~vnS~I~~P~~~~~i~~~~g~~~v~G~A~~G~g-~I~rVevS~DgG~tW~~A~L~~~~~ 320 (390)
T 2xts_A 249 LMPDGRA-------RKWTWVMDAKSVITSPSPQVPIRHGKGPLVISGLAWSGNG-RITRVDVSLDGGKNWTTARITGQAL 320 (390)
T ss_dssp ECTTSCE-------EECCCBCCCEEEEEESBTTBCCCSCSEEEEEEEEEECTTS-CEEEEEEESBTTSSCEECEEESCCC
T ss_pred cCCCCCc-------cccceeecCceeeecCCCCCEeecCCCcEEEEEEEEcCCC-cEEEEEEecCCCCcEEEeeccCCCC
Confidence 7664322 13578999999999999999985 458999999999877 6999999999999999999998864
Q ss_pred CCccccCCCCCceeeEEeEEEEECC-CccEEEEEeEeCCCCCCCCCccccccc----ccCCCCceEEEEEEE
Q 016226 322 IPYIADHMSSDKWAWVFFEVIIDIP-HSTQIVAKAVDTAANVQPESVETIWNL----RGVLNTSWHRVQVRV 388 (393)
Q Consensus 322 ~p~~~~~~~~~~~aW~~W~~~~~~~-~~~~i~~RA~D~~G~~QP~~~~~~wN~----~G~~~n~~~~v~v~v 388 (393)
+++|++|++.|.+. +.++|+|||||++||+||+.. .+||+ .||++|++|+++|+.
T Consensus 321 -----------~~aw~~w~~~~~~~~g~~~i~vRA~D~~gn~QP~~~-~~~~~~g~~~gy~~n~i~~~~v~~ 380 (390)
T 2xts_A 321 -----------PKALTRFHLDIDWDGSEMLLQSRAVDETGYVQPTKD-ALRAIRGRNNVYHNNGIQTWWVKA 380 (390)
T ss_dssp -----------TTSCEEEEEEEEECSCCEEEEEEEEETTCCBCCCHH-HHHHHHCSCCCSCCCCCCEEEECT
T ss_pred -----------CCceEEEEEEEEcCCCccEEEEEEEcCCCCcCCCcc-cccccCccccceeeeeEEEEEEcc
Confidence 68999999999874 557999999999999999864 36777 579999999999873
No 8
>1xdy_A Bacterial sulfite oxidase; bioinformatics, sequence analysis, electron transfer, oxidoreductase, molybdoenzymes, molybdopterin; HET: MTE; 2.20A {Escherichia coli} SCOP: d.176.1.1 PDB: 1xdq_A*
Probab=100.00 E-value=7.6e-53 Score=408.94 Aligned_cols=255 Identities=18% Similarity=0.262 Sum_probs=206.3
Q ss_pred eeecCCCCCCCCCCccCccCCCCcCCCCceEeccCC------CCcccCCCCeEEEEEeccCCceeecHHHHhc-CccEeE
Q 016226 20 LQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGP------IPIVDDIESYYVSICGLIENSKDLFMRDIRM-LRKYNI 92 (393)
Q Consensus 20 l~~~~~~P~n~e~p~~~l~~~~iTP~~~~yvr~h~~------~P~~~~~~~w~L~V~G~V~~p~~ltl~dL~~-lp~~~~ 92 (393)
|.+....|||+|+++... ++|||+++||+|||++ +|.++. ++|+|+|+|+|++|++||++||++ ||++++
T Consensus 20 ~~~~~~~~~~~~~~~t~~--~~iT~~~~fY~~~~~~~~p~~~~~~id~-~~w~L~V~G~V~~p~~ltl~dL~~~lP~~e~ 96 (298)
T 1xdy_A 20 LEFSKPAAWQNNLPLTPA--DKVSGYNNFYEFGLDKADPAANAGSLKT-DPWTLKISGEVAKPLTLDHDDLTRRFPLEER 96 (298)
T ss_dssp CCCBCCGGGCCCCCCCCH--HHHTTSCCCGGGCSSTTHHHHHGGGSCC-SSCEEEEEESBSSCEEEEHHHHHHTSCCEEE
T ss_pred cccCCCCCCCCCCCCCcH--HHcCCCCCeEEecCCcCCcccccCcccC-CCeEEEEeeecCCCeEeeHHHHhccCCCeEE
Confidence 677888999999987633 5799999999999986 788877 999999999999999999999997 999999
Q ss_pred EEEEEeecCCcccccccccccccccccCcccceeEEcccHHHHHHHcCCCCCCccccCCceEEEEEEccCcc---ccC--
Q 016226 93 TATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCK---EEN-- 167 (393)
Q Consensus 93 ~~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~~~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~---~~~-- 167 (393)
+++++|++ +|+. ++.|+||+|+|||++||++. ++++|.|+|+|... +..
T Consensus 97 ~~~l~Cv~---------------~Ws~----~~~W~GV~L~dLL~~aG~~~-------~A~~V~f~~~dd~~~~~G~~~~ 150 (298)
T 1xdy_A 97 IYRMRCVE---------------AWSM----VVPWIGFPLHKLLALAEPTS-------NAKYVAFETIYAPEQMPGQQDR 150 (298)
T ss_dssp EEEEEETT---------------TEEE----EEEEEEEEHHHHHHHHCBCT-------TCCEEEEEECCCTTTCGGGTCT
T ss_pred EEEEEecC---------------CCcc----eeEEEeEEHHHHHHHcCCCC-------CCeEEEEEeCCChhcccCcccc
Confidence 99999986 4763 79999999999999999985 58999999997321 111
Q ss_pred ------CCCeEEEEechhhcCCCCCEEEEEecCCccCCCCCCCcEEEEecCccccccccceeEEEEEeccCCCceeeecc
Q 016226 168 ------GGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDY 241 (393)
Q Consensus 168 ------~~~Y~~sipl~~~~~~~~~vlLAy~mNGepL~~~hG~PlRLVvPg~~G~~~VKwL~~Iev~~~~~~~~~~~~~Y 241 (393)
..+|.++|||+++|++ ++||||+||||||+++||||+||||||++|+||||||++|+|++++++||||+++|
T Consensus 151 ~~~~~~~~~Y~~slpl~~a~~~--~~lLA~~mNGepLp~~hG~PlRLVVPg~yG~ksvKwl~~Iev~~~~~~g~We~~~y 228 (298)
T 1xdy_A 151 FIGGGLKYPYVEGLRLDEAMHP--LTLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAP 228 (298)
T ss_dssp TTTTTCCSSCEEEEEHHHHHST--TCEEEEEETTEECCGGGTCSCEEECTTBCGGGSCCSEEEEEEESSCCCCHHHHHCT
T ss_pred ccccccCCCeEEEEEHHHhcCC--CEEEEEeeCCeECCcccCCceEEEeCCccccCcceeccEEEEEeCCCCCchhhcCc
Confidence 1259999999999996 79999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCcccCCCCCCCCccceeceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceE
Q 016226 242 KMFPPSVNWDNINWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVE 313 (393)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~ 313 (393)
+.+.-.. +.+-.-..|.++|..+++|. + .+. +. .-++..++|.|.+..|.+++.++|.++...+
T Consensus 229 ~~yg~~~---n~n~~v~~P~w~q~~er~i~-~-g~~-~~--~~r~~t~~fnGy~~~va~ly~~md~~~~~~~ 292 (298)
T 1xdy_A 229 DEYGFYA---NVNPYVDHPRWSQATERFIG-S-GGI-LD--VQRQPTLLFNGYADQVASLYRGLDLRENFLE 292 (298)
T ss_dssp TTCCSSC---BCCTTSCBTTBCCSEEEECC-C-C---------CEECCGGGGTHHHHHHHHTTCCC------
T ss_pred cccCccc---CCCCCCCCCcccccceeEEc-C-CCc-ee--ecccCceeecccHHHhhhhhhCcccchhhhh
Confidence 8653211 11111234567777788774 1 110 00 1356888999988889999999999976543
No 9
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=99.08 E-value=2.2e-10 Score=93.87 Aligned_cols=75 Identities=20% Similarity=0.118 Sum_probs=63.1
Q ss_pred EEEEecCCCcccCC-cEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCccccCCCCCceeeEEeEEEEEC-C
Q 016226 269 VICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDI-P 346 (393)
Q Consensus 269 ~I~~P~~g~~v~~g-~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~~~~~~~~~~aW~~W~~~~~~-~ 346 (393)
.|++|.+|+++..| .++|.+-|++..| .|.+|||++||+. + + .-.|..|+|.|+. .
T Consensus 3 sItsP~~ga~v~~g~~v~i~a~A~D~dg-~V~kVef~vdg~~------v-g--------------~dt~apy~~~w~~~~ 60 (98)
T 3pe9_A 3 KLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGEV------I-G--------------SDREAPYEYEWKAVE 60 (98)
T ss_dssp EEEECCTTCCEETTSEEEEEEEECCSSS-CEEEEEEEETTEE------E-E--------------EECSSSEEEEEECCS
T ss_pred EEeeCCCcCEEcCCCEEEEEEEEEeCCC-CEEEEEEEECCEE------e-c--------------ccccCCEEEEEEcCC
Confidence 58999999999987 6999999998644 7999999999962 1 1 2357889999997 5
Q ss_pred CccEEEEEeEeCCCCCCCC
Q 016226 347 HSTQIVAKAVDTAANVQPE 365 (393)
Q Consensus 347 ~~~~i~~RA~D~~G~~QP~ 365 (393)
|.++|.+||+|.+|++|..
T Consensus 61 G~htl~a~AtD~~G~~~tS 79 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAASTP 79 (98)
T ss_dssp EEEEEEEEEEETTCCBCCC
T ss_pred ccEEEEEEEEECCCCEEee
Confidence 6689999999999999974
No 10
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=97.93 E-value=1.5e-05 Score=72.34 Aligned_cols=74 Identities=14% Similarity=-0.017 Sum_probs=58.7
Q ss_pred EEEEecCCCcccCC-cEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCccccCCCCCceeeEEeEEEEEC--
Q 016226 269 VICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDI-- 345 (393)
Q Consensus 269 ~I~~P~~g~~v~~g-~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~~~~~~~~~~aW~~W~~~~~~-- 345 (393)
.|+.|.+|+.+..| .++|.+-|+. .+ +|.+|||.+||.. +. . -.|..|+|.|..
T Consensus 3 ~ItsP~~g~~~~~g~~vtv~~~As~-d~-~V~~Ve~~~dg~~------v~-~--------------~t~~~ys~~~~~~~ 59 (190)
T 3pdd_A 3 TIDSPVAGERFEAGKDINISATVKS-KT-PVSKVEFYNGDTL------IS-S--------------DTTAPYTAKITGAA 59 (190)
T ss_dssp EEEESCTTCEEETTSCEEEEEEECC-SS-CEEEEEEEETTEE------EE-E--------------ECSSSEEEEECSCC
T ss_pred EEecCCCCCEEcCCCeEEEEEEEeC-CC-CEEEEEEEECCEE------Ec-c--------------ccCCceEEEeccCC
Confidence 58899999999988 7999999994 34 8999999999741 11 1 134567788875
Q ss_pred CCccEEEEEeEeCCCCCCCC
Q 016226 346 PHSTQIVAKAVDTAANVQPE 365 (393)
Q Consensus 346 ~~~~~i~~RA~D~~G~~QP~ 365 (393)
.+.++|.+||+|.+||++..
T Consensus 60 ~G~htlta~A~D~aGn~s~s 79 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRRIES 79 (190)
T ss_dssp SEEEEEEEEEEETTSCEEEC
T ss_pred CccEEEEEEEEECCCCEeee
Confidence 45689999999999999763
No 11
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=97.34 E-value=0.00083 Score=60.71 Aligned_cols=77 Identities=19% Similarity=0.123 Sum_probs=56.1
Q ss_pred ceEEEEEecCCCcccCC-cEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCccccCCCCCceeeEEeEEEEE
Q 016226 266 VQCVICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIID 344 (393)
Q Consensus 266 v~S~I~~P~~g~~v~~g-~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~~~~~~~~~~aW~~W~~~~~ 344 (393)
+.-.|+.|..|..+..| .++|.+-|-+..| .|.+|||.+||.. +.... ...|+|.|.
T Consensus 92 Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~dg~~------v~t~t---------------~~~y~~~~~ 149 (190)
T 3pdd_A 92 PTVKLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGEV------IGSDR---------------EAPYEYEWK 149 (190)
T ss_dssp CEEEEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEETTEE------EEEEC---------------SSSEEEEEE
T ss_pred CceeecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEECCEE------Eeccc---------------CCCEEEEEe
Confidence 34468899999988655 7999999976434 6999999999842 11111 123556666
Q ss_pred C-CCccEEEEEeEeCCCCCCC
Q 016226 345 I-PHSTQIVAKAVDTAANVQP 364 (393)
Q Consensus 345 ~-~~~~~i~~RA~D~~G~~QP 364 (393)
. .+.++|.+||+|.+||+-.
T Consensus 150 ~~~G~~tl~a~A~D~aGn~s~ 170 (190)
T 3pdd_A 150 AVEGNHEISVIAYDDDDAAST 170 (190)
T ss_dssp CCSEEEEEEEEEEETTCCBCC
T ss_pred cCCeeEEEEEEEEECCCCEEe
Confidence 5 5568999999999999864
No 12
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=60.31 E-value=8.9 Score=39.47 Aligned_cols=49 Identities=14% Similarity=0.064 Sum_probs=38.5
Q ss_pred EEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeec
Q 016226 268 CVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASR 316 (393)
Q Consensus 268 S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l 316 (393)
.++..|..|-.++.|++.+-.++....|.....+-.|.|+|+||+....
T Consensus 322 ~~~~g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~~ 370 (523)
T 4fj6_A 322 FLLQGPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRGKTWHLHNL 370 (523)
T ss_dssp EEEECSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCC
T ss_pred EEecCCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCCCeEEECCC
Confidence 4566677777788898877777776556568899999999999997654
No 13
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=55.05 E-value=16 Score=38.65 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=42.9
Q ss_pred ceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecCCc
Q 016226 266 VQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 319 (393)
Q Consensus 266 v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~ 319 (393)
....|..|..|-+++.|++.+--++....+..+.-+..|-|+|+||+......+
T Consensus 186 ~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G~TW~ls~~~~~ 239 (648)
T 1ms9_A 186 TNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSA 239 (648)
T ss_dssp EEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCC
T ss_pred eEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCCCCEEECCCCCC
Confidence 456788888888888998887777776556678889999999999998765443
No 14
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=54.03 E-value=13 Score=40.30 Aligned_cols=51 Identities=18% Similarity=0.047 Sum_probs=39.2
Q ss_pred ceEEEEEecCCCccc---------CCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecC
Q 016226 266 VQCVICSLEDVNVMK---------PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRY 317 (393)
Q Consensus 266 v~S~I~~P~~g~~v~---------~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~ 317 (393)
+++++..|.+|-+++ .|++.+-.++..+ +..-..+.+|-|+|+||+.....
T Consensus 541 ~~~~~~GPG~GIql~~~p~~~g~~dGRLV~P~~~~~~-~~~~s~~~ySdD~GkTW~~g~~i 600 (781)
T 1w0p_A 541 NASVNPGPGHGITLTRQQNISGSQNGRLIYPAIVLDR-FFLNVMSIYSDDGGSNWQTGSTL 600 (781)
T ss_dssp CSEEECCSSCCEECCCCTTSTTCCTTCEEEEEEEESS-SCEEEEEEEESSSSSSCEECCCC
T ss_pred cceeecCCCceEEEeeccccCcCCCCeEEEEEEEeCC-CCcEEEEEEECCCCCcccccccc
Confidence 466778888887776 6888888888754 33457789999999999987653
No 15
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=51.42 E-value=24 Score=34.19 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=26.7
Q ss_pred ccCCcEEEEEEEEeCC-CCCeEEEEEEeCCCCCceEeec
Q 016226 279 MKPGKAKVSGYAVSGG-GRGIERVDISVDGGKNWVEASR 316 (393)
Q Consensus 279 v~~g~v~i~G~A~sGg-g~~V~rVEVS~DgG~tW~~A~l 316 (393)
++.|.+.+.|.++... ...-..|..|.|+|+||+....
T Consensus 95 ~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~ 133 (355)
T 3a72_A 95 FKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSH 133 (355)
T ss_dssp BCTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEE
T ss_pred CCCCcEEEEEeeecCCCCCceEEEEEECCCCccCccCcc
Confidence 3467777777776421 1235679999999999988765
No 16
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A*
Probab=47.94 E-value=27 Score=33.43 Aligned_cols=49 Identities=14% Similarity=0.081 Sum_probs=33.1
Q ss_pred EEEEEecCCCcccC--CcEEEEEEEEeCC-----CCCeEEEEEEeCCCCCceEeec
Q 016226 268 CVICSLEDVNVMKP--GKAKVSGYAVSGG-----GRGIERVDISVDGGKNWVEASR 316 (393)
Q Consensus 268 S~I~~P~~g~~v~~--g~v~i~G~A~sGg-----g~~V~rVEVS~DgG~tW~~A~l 316 (393)
..+..|..+-.+.. |++.+-.++.... +.....+-.|.|+|+||+....
T Consensus 158 ~~~~~pg~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~ 213 (382)
T 1so7_A 158 TFAVGPGHCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHF 213 (382)
T ss_dssp EEEECSSCCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCC
T ss_pred eeccCCCcEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCCceeEcCcc
Confidence 45556656656666 8776655665321 1346788999999999998654
No 17
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=42.32 E-value=40 Score=32.85 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=26.4
Q ss_pred ccCCcEEEEEEEEeCC-CCCeEEEEEEeCCCCCceEeec
Q 016226 279 MKPGKAKVSGYAVSGG-GRGIERVDISVDGGKNWVEASR 316 (393)
Q Consensus 279 v~~g~v~i~G~A~sGg-g~~V~rVEVS~DgG~tW~~A~l 316 (393)
++.|++.+.+.++... ...-..|..|.|+|+||+....
T Consensus 100 ~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~~~ 138 (367)
T 2ydt_A 100 YPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSH 138 (367)
T ss_dssp BCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEEEE
T ss_pred cCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCCee
Confidence 3467777777666421 1235679999999999988654
No 18
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=41.28 E-value=30 Score=33.49 Aligned_cols=21 Identities=33% Similarity=0.287 Sum_probs=16.8
Q ss_pred CCCeEEEEEEeCCCCCceEee
Q 016226 295 GRGIERVDISVDGGKNWVEAS 315 (393)
Q Consensus 295 g~~V~rVEVS~DgG~tW~~A~ 315 (393)
+.....|..|.|+|+||++..
T Consensus 48 ~~~~~~v~rS~DgG~TW~~~~ 68 (355)
T 3a72_A 48 PAVYFPIYRSKDHGKTWNEIS 68 (355)
T ss_dssp SCCCEEEEEESSTTSCCEEEE
T ss_pred CCceEEEEEEcCCCcCcCCCc
Confidence 335667899999999999854
No 19
>3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A
Probab=40.97 E-value=71 Score=32.48 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=54.7
Q ss_pred ceEEEEEecCCCcccCCcEEEEEEEEeCCCCCeEEEEEEeCCCCC---ceEeecCCcCCCCccccCCCCCceeeEEeEEE
Q 016226 266 VQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKN---WVEASRYQKTGIPYIADHMSSDKWAWVFFEVI 342 (393)
Q Consensus 266 v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~V~rVEVS~DgG~t---W~~A~l~~~~~~p~~~~~~~~~~~aW~~W~~~ 342 (393)
....|.+|.+|++|..++++|+=-.-. . ..++|-+++|++.+ =....++.. + .|+.+
T Consensus 373 ~~~~~~~p~~~~~~~~~~~~i~~~v~~--~-~~~~v~~~~~~~~~~~~~~~~~~~~~-g----------------~~~~~ 432 (475)
T 3tp4_A 373 PVVHIASPADGARVASAPTTVRVRVGG--T-DVQSVTVEVAQGGTVVDTLDLAYDGA-L----------------WWTAP 432 (475)
T ss_dssp CEEEEEESCTTCEECSSSEEEEEEEES--S-CEEEEEEEEEETTEEEEEEECEECSS-S----------------CEEEE
T ss_pred ceEEEeccCCCCEEcccceEEEEEEec--C-CCceEEEEeCCCCccccceeeeeccC-c----------------eEeec
Confidence 345799999999998888888766653 3 68999999998854 111122211 1 58899
Q ss_pred EECC------CccEEEEEeEeCCCCC
Q 016226 343 IDIP------HSTQIVAKAVDTAANV 362 (393)
Q Consensus 343 ~~~~------~~~~i~~RA~D~~G~~ 362 (393)
|++. +..+|.+.||..+|..
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (475)
T 3tp4_A 433 WSPTSAQLDNSTYTVTATATTAAGTL 458 (475)
T ss_dssp ECCC--------CEEEEEEEETTEEE
T ss_pred cCCChhhccCceEEEEEEEeecccee
Confidence 9884 2358999999998864
No 20
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=40.12 E-value=74 Score=32.51 Aligned_cols=16 Identities=38% Similarity=0.619 Sum_probs=14.7
Q ss_pred EEEEEeCCCCCceEee
Q 016226 300 RVDISVDGGKNWVEAS 315 (393)
Q Consensus 300 rVEVS~DgG~tW~~A~ 315 (393)
+|-.|.|+|+||.++.
T Consensus 401 ~v~~S~D~G~TWt~~~ 416 (523)
T 4fj6_A 401 AVATTKDLGKTWTEHP 416 (523)
T ss_dssp EEEEESSTTSSCEECT
T ss_pred EEEEECCCCCccCcCc
Confidence 7899999999999985
No 21
>4eib_A Glucoamylase; beta barrel, starch binding, amylose, hydrolase; 1.86A {Rhizopus oryzae}
Probab=39.42 E-value=28 Score=28.41 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=39.2
Q ss_pred CCcEEEEEEEEeCCCCCeEEEEEEeCCCCCceE--ee----cCCcCCCCccccCCCCCceeeEEeEEEEECCCccEEEEE
Q 016226 281 PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVE--AS----RYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAK 354 (393)
Q Consensus 281 ~g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~--A~----l~~~~~~p~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~R 354 (393)
.|.|.|+=+|+. +..-|..|+ ||..|+. .+ -.... ..-.|..|.|..+.++..+..+|
T Consensus 42 sGtI~V~NlAye----K~V~VrYs~-~~d~W~s~~~~~~A~y~s~~-----------~~~~~e~~~F~~~apGa~qFaIr 105 (109)
T 4eib_A 42 SGKIYVKNIAYS----KKVTVVYAD-GSDNWNNNGNIIAASFSGPI-----------SGSNYEYWTFSASVKGIKEFYIK 105 (109)
T ss_dssp EEEEEEECCSSC----EEEEEEEEC-TTSCCTTTTCEEECEEEEEC-----------TTSSEEEEEEEEECSCCCEEEEE
T ss_pred EEEEEEEecccc----eEEEEEEee-cCCCcccCCcEeeEEEecCC-----------CCCCeEEEEEEEECCCCEEEEEE
Confidence 478888888863 777888885 5567876 22 22211 02368899999998877666655
No 22
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=39.17 E-value=33 Score=33.40 Aligned_cols=21 Identities=38% Similarity=0.422 Sum_probs=16.9
Q ss_pred CCCeEEEEEEeCCCCCceEee
Q 016226 295 GRGIERVDISVDGGKNWVEAS 315 (393)
Q Consensus 295 g~~V~rVEVS~DgG~tW~~A~ 315 (393)
+...-.|..|.|||+||+...
T Consensus 53 ~~~~~~v~rS~DgG~TW~~~~ 73 (367)
T 2ydt_A 53 PNVWFPIVKSKDGGKTWKEIS 73 (367)
T ss_dssp SCCCEEEEEESSTTSSCEEEE
T ss_pred CCeEEEEEEECCCCcCcCcCc
Confidence 335668899999999999864
No 23
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=37.32 E-value=77 Score=25.44 Aligned_cols=55 Identities=16% Similarity=0.195 Sum_probs=37.9
Q ss_pred CCeEEEEEEeCCCCCceEeecCCcCCCCccccCCCCCceeeEEeEEEEECCCccEEEEEeEeCCCCCCC
Q 016226 296 RGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQP 364 (393)
Q Consensus 296 ~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP 364 (393)
+=|.+|+++. +|+.--.|++..... ..+ .++|.+......+|.++++|..|++--
T Consensus 46 ~~I~~v~~~~-ng~~v~~~~~~~~iS---------~NP----~~~F~~~~~~~g~l~v~~~Dn~G~~~~ 100 (108)
T 2oxg_Z 46 SIINRFTCEL-NGVNVVDVAIDPAVS---------TNP----YFEFDAKVDAAGEFKFTWYDDDGSVYE 100 (108)
T ss_dssp BCEEEEEEEE-TTEEEEEEEECTTBC---------SSC----EEEEEEEECSSEEEEEEEEETTSCEEE
T ss_pred HheEEEEEEE-CCEEEEEEEeCCccc---------cCC----eEEEEEecCCCcEEEEEEEECCCCEEE
Confidence 3488888886 446777777765421 012 567777765455999999999998643
No 24
>1v8h_A Sulfur oxidation protein SOXZ; lithotrophic sulfur oxidation, unknown function, structural genomics; 1.20A {Thermus thermophilus HB8} SCOP: b.1.18.19
Probab=37.07 E-value=84 Score=25.12 Aligned_cols=55 Identities=16% Similarity=0.214 Sum_probs=38.3
Q ss_pred CCeEEEEEEeCCCCCceEeecCCcCCCCccccCCCCCceeeEEeEEEEECCCccEEEEEeEeCCCCCCC
Q 016226 296 RGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQP 364 (393)
Q Consensus 296 ~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP 364 (393)
+=|.+|+++. +|+.--.|++..... ..+ .++|.+...+...|.++++|..|++--
T Consensus 45 ~~I~~v~~~~-ng~~v~~~~~~~~iS---------~nP----~~~F~~~~~~~g~l~v~~~Dn~G~~~~ 99 (107)
T 1v8h_A 45 KYINLVEVYF-EGEKVAEARPGPSTS---------ANP----LYAFKFKAEKAGTFTIKLKDTDGDTGE 99 (107)
T ss_dssp BCEEEEEEEE-TTEEEEEECCCSSCC---------SSC----EEEEEEECCSCEEEEEEEEETTSCEEE
T ss_pred HheEEEEEEE-CCEEEEEEEeCCccc---------cCC----eEEEEEecCCCceEEEEEEECCCCEEE
Confidence 3488899986 446777777764421 012 677777776556799999999998654
No 25
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=34.60 E-value=45 Score=32.64 Aligned_cols=49 Identities=16% Similarity=0.081 Sum_probs=37.0
Q ss_pred eEEEEEecCCCcccCCcEEEEEEEEeC---CCCCeEEEEEEeCCCCCceEeec
Q 016226 267 QCVICSLEDVNVMKPGKAKVSGYAVSG---GGRGIERVDISVDGGKNWVEASR 316 (393)
Q Consensus 267 ~S~I~~P~~g~~v~~g~v~i~G~A~sG---gg~~V~rVEVS~DgG~tW~~A~l 316 (393)
...|..|..|-+++.|++.+--++... .+..+..+-.|-| |+||+....
T Consensus 169 ~~~~~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G~tW~~~~~ 220 (379)
T 3sil_A 169 SAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-GITWSLPSG 220 (379)
T ss_dssp EEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-SSSEECCSC
T ss_pred eeecCCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-CCCeEECCC
Confidence 456778888888889987776666532 3456888999999 999987654
No 26
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.39 E-value=77 Score=23.86 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=16.3
Q ss_pred CCccEEEEEeEeCCCCCCCC
Q 016226 346 PHSTQIVAKAVDTAANVQPE 365 (393)
Q Consensus 346 ~~~~~i~~RA~D~~G~~QP~ 365 (393)
...|.+.|||.+..|...|.
T Consensus 75 ~t~Y~frV~A~n~~G~s~~S 94 (110)
T 2yuw_A 75 DAKIFVRVKAVNAAGASEPK 94 (110)
T ss_dssp TCEEEEEEEEEETTEECCCE
T ss_pred CCEEEEEEEEEcCCcCCCCc
Confidence 34579999999999987764
No 27
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=26.16 E-value=1e+02 Score=28.32 Aligned_cols=56 Identities=14% Similarity=0.242 Sum_probs=33.9
Q ss_pred EEEeCCCCCeEEEEEEeCCCCCceEeecCCcCCCCccccCCCCCceeeEEeEEEEEC-CCccEEEEEeEeCCCCC
Q 016226 289 YAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDI-PHSTQIVAKAVDTAANV 362 (393)
Q Consensus 289 ~A~sGgg~~V~rVEVS~DgG~tW~~A~l~~~~~~p~~~~~~~~~~~aW~~W~~~~~~-~~~~~i~~RA~D~~G~~ 362 (393)
+...++.-.|.+|||.-++...|+..... .+ ..|++.-.. ..+ .|.+|-|+.+|.+
T Consensus 165 v~n~~g~g~V~~V~ik~~~~~~W~~m~r~--wG---------------~~W~~~~~~~l~g-pls~RvT~~~G~~ 221 (241)
T 1n10_A 165 VKYVNGDGDVVAVDIKEKGKDKWIELKES--WG---------------AIWRIDTPDKLTG-PFTVRYTTEGGTK 221 (241)
T ss_dssp EECCCCSSCEEEEEEEETTCCCCEECBCC--TT---------------TCEEEECSSCCCS-CEEEEEEESSSCE
T ss_pred EEecCCCCCEEEEEEEeCCCCCeEECccC--cC---------------cEEEeCCCCCCCC-CEEEEEEEeCCcE
Confidence 33333323699999999987799865431 11 145554332 122 6778888877764
No 28
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A*
Probab=25.93 E-value=37 Score=34.05 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=31.1
Q ss_pred EecCCCcccC----CcEEEEEEEEeC----CCCCeEEEEEEeCCCCCceEeecC
Q 016226 272 SLEDVNVMKP----GKAKVSGYAVSG----GGRGIERVDISVDGGKNWVEASRY 317 (393)
Q Consensus 272 ~P~~g~~v~~----g~v~i~G~A~sG----gg~~V~rVEVS~DgG~tW~~A~l~ 317 (393)
.|..|-.++. |++.+-.++... .|.....|..|.|+|+||+.....
T Consensus 249 gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G~TW~~~~~v 302 (471)
T 2w20_A 249 GPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHGKTWHAGEAV 302 (471)
T ss_dssp CCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTTSSCEECCCT
T ss_pred CCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCCCCcccCCcc
Confidence 4544545544 777776666431 133578899999999999987654
No 29
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=25.15 E-value=93 Score=23.47 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=16.9
Q ss_pred CCccEEEEEeEeCCCCCCCCC
Q 016226 346 PHSTQIVAKAVDTAANVQPES 366 (393)
Q Consensus 346 ~~~~~i~~RA~D~~G~~QP~~ 366 (393)
...|.+.|||.+..|...|..
T Consensus 76 ~t~Y~frV~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 76 GARILFRVVGVNIAGRSEPAT 96 (111)
T ss_dssp TCCEEEEEEEEETTEECCCCC
T ss_pred CCEEEEEEEEEcCCcCCCCcc
Confidence 445799999999999877743
No 30
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=25.14 E-value=66 Score=31.80 Aligned_cols=35 Identities=31% Similarity=0.448 Sum_probs=25.7
Q ss_pred CcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeec
Q 016226 282 GKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASR 316 (393)
Q Consensus 282 g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l 316 (393)
|++.+--++....+.....|-.|.|+|+||+....
T Consensus 236 Grlv~p~~~~~~~g~~~~~v~~S~D~G~tW~~~~~ 270 (449)
T 2bf6_A 236 GRIVVPVYYTNEKGKQSSAVIYSDDSGKNWTIGES 270 (449)
T ss_dssp TCEEEEEEEECTTCCEEEEEEEESSTTSSCEECCC
T ss_pred CEEEEEEEEEcCCCCEEEEEEEECCCCCceeECCc
Confidence 66666555554445457889999999999998764
No 31
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=24.93 E-value=78 Score=32.14 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=16.7
Q ss_pred CeEEEEEEeCCCCCceEeec
Q 016226 297 GIERVDISVDGGKNWVEASR 316 (393)
Q Consensus 297 ~V~rVEVS~DgG~tW~~A~l 316 (393)
....+-.|.|+|+||+....
T Consensus 188 ~~~~~~~S~D~G~TW~~~~~ 207 (601)
T 1w8o_A 188 FQAVSVYSDDHGRTWRAGEA 207 (601)
T ss_dssp EEEEEEEESSTTSSCEECCC
T ss_pred eeEEEEEECCCCcCccCCCC
Confidence 46788899999999998754
No 32
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=24.36 E-value=87 Score=33.13 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=31.4
Q ss_pred EEEEEecCCCcccC----CcEEEEEEEEeCCCCCeEEEEEEeCCCCCceEeecC
Q 016226 268 CVICSLEDVNVMKP----GKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRY 317 (393)
Q Consensus 268 S~I~~P~~g~~v~~----g~v~i~G~A~sGgg~~V~rVEVS~DgG~tW~~A~l~ 317 (393)
..+..|.+|-.+.. |++.+-.++.. .....+-.|.|+|+||+.....
T Consensus 456 ~~~~gpG~gI~l~d~~~~GrLv~p~~~~~---~~~s~i~~SdDgG~TW~~~~~~ 506 (679)
T 2sli_A 456 FLVVGPGIGKQISTGENAGRLLVPLYSKS---SAELGFMYSDDHGDNWTYVEAD 506 (679)
T ss_dssp EEEECSEECEECCSSTTTTCEEEEEEEES---SCSEEEEEESSTTSSCEEEECC
T ss_pred ceecCCCceEEecCCCCCCEEEEEEEecC---CCEEEEEEECCCCCceEeCccC
Confidence 44555555555554 77666555442 2567899999999999987653
No 33
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=24.11 E-value=79 Score=31.29 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=14.6
Q ss_pred EEEEEEeCCCCCceEee
Q 016226 299 ERVDISVDGGKNWVEAS 315 (393)
Q Consensus 299 ~rVEVS~DgG~tW~~A~ 315 (393)
.++|.|+|+|.||+.-.
T Consensus 101 V~LeYStd~G~sW~~v~ 117 (387)
T 2ddu_A 101 VLLQYSHDAGMSWFLVK 117 (387)
T ss_dssp EEEEEESSTTSCCEESC
T ss_pred EEEEEEeCCCcceEeee
Confidence 56999999999999654
No 34
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=23.50 E-value=64 Score=34.31 Aligned_cols=24 Identities=25% Similarity=0.443 Sum_probs=20.8
Q ss_pred CCeEEEEEEeCCCCCceEeecCCc
Q 016226 296 RGIERVDISVDGGKNWVEASRYQK 319 (393)
Q Consensus 296 ~~V~rVEVS~DgG~tW~~A~l~~~ 319 (393)
..+..+-.|+|.|+||+..++...
T Consensus 465 ~~t~~i~YS~DeG~tW~~~~f~~~ 488 (685)
T 3f6k_A 465 RPINVIKFSTDEGQCWQTYTFTRD 488 (685)
T ss_dssp SCBCEEEEESSTTSSCEEEECCSS
T ss_pred CCcCEEEEECCCCCcccccccCCC
Confidence 468889999999999999999643
No 35
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=22.97 E-value=80 Score=25.13 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=17.7
Q ss_pred CCccEEEEEeEeCCCCCCCCC
Q 016226 346 PHSTQIVAKAVDTAANVQPES 366 (393)
Q Consensus 346 ~~~~~i~~RA~D~~G~~QP~~ 366 (393)
...|++.++|.+..|..+|..
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~ 94 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTV 94 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEEEEeCCcCcCCcC
Confidence 456799999999999998854
No 36
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=22.75 E-value=2.2e+02 Score=23.61 Aligned_cols=32 Identities=19% Similarity=0.356 Sum_probs=19.9
Q ss_pred cEEEEEEEEeCC----CCCeEE--EEEEeCCCCCceEee
Q 016226 283 KAKVSGYAVSGG----GRGIER--VDISVDGGKNWVEAS 315 (393)
Q Consensus 283 ~v~i~G~A~sGg----g~~V~r--VEVS~DgG~tW~~A~ 315 (393)
..+|.++++... ...+++ |++|.| |++|+...
T Consensus 80 ~~~I~~v~~~~r~~~~~~~~~~y~I~~S~D-G~~W~~v~ 117 (161)
T 4a41_A 80 SYEINKFTYLPRSGAKNGNITKYELHVSED-GNNFRKIS 117 (161)
T ss_dssp EEEEEEEEEECCSSCCTTCEEEEEEEEESS-SSCEEEEE
T ss_pred CEEEeEEEEEecCCCCCCcEEEEEEEEECC-CCceEEee
Confidence 577888887542 123554 556655 56998754
No 37
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=21.66 E-value=1e+02 Score=23.92 Aligned_cols=19 Identities=16% Similarity=0.158 Sum_probs=15.5
Q ss_pred CCccEEEEEeEeCCCC-CCC
Q 016226 346 PHSTQIVAKAVDTAAN-VQP 364 (393)
Q Consensus 346 ~~~~~i~~RA~D~~G~-~QP 364 (393)
...|.+.|||.++.|. ..|
T Consensus 78 ~t~Y~frV~A~N~~G~~s~~ 97 (112)
T 1bpv_A 78 DAAYEFRVIAKNAAGAISPP 97 (112)
T ss_dssp SCCEEEEEEEECTTSCEEEE
T ss_pred CCEEEEEEEEEECCCCCCCC
Confidence 3457999999999998 555
Done!